Multiple sequence alignment - TraesCS2D01G029400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G029400 chr2D 100.000 5902 0 0 1 5902 12124691 12130592 0.000000e+00 10900.0
1 TraesCS2D01G029400 chr2D 84.776 3547 441 63 1423 4918 12329290 12332788 0.000000e+00 3467.0
2 TraesCS2D01G029400 chr2D 85.640 2709 344 35 2233 4915 12386599 12383910 0.000000e+00 2806.0
3 TraesCS2D01G029400 chr2D 82.675 785 95 27 1395 2144 12388160 12387382 0.000000e+00 658.0
4 TraesCS2D01G029400 chr2D 72.454 1895 402 93 2261 4095 599948742 599946908 1.140000e-136 497.0
5 TraesCS2D01G029400 chr2D 76.025 317 72 4 4550 4864 536224081 536223767 1.700000e-35 161.0
6 TraesCS2D01G029400 chr2D 92.233 103 8 0 782 884 11982251 11982353 4.770000e-31 147.0
7 TraesCS2D01G029400 chr2D 77.320 194 36 5 979 1168 12328469 12328658 2.250000e-19 108.0
8 TraesCS2D01G029400 chr2A 97.665 4069 75 12 1271 5322 12738722 12742787 0.000000e+00 6970.0
9 TraesCS2D01G029400 chr2A 85.820 2708 339 38 2233 4915 12963164 12960477 0.000000e+00 2832.0
10 TraesCS2D01G029400 chr2A 82.933 791 93 28 1390 2144 12964728 12963944 0.000000e+00 675.0
11 TraesCS2D01G029400 chr2A 90.110 455 18 3 785 1238 12737970 12738398 3.090000e-157 566.0
12 TraesCS2D01G029400 chr2A 96.053 304 10 2 5519 5821 12743312 12743614 1.480000e-135 494.0
13 TraesCS2D01G029400 chr2A 82.155 594 84 14 3645 4222 12524986 12524399 1.910000e-134 490.0
14 TraesCS2D01G029400 chr2A 72.184 1891 399 96 2263 4092 733685722 733683898 1.500000e-125 460.0
15 TraesCS2D01G029400 chr2A 96.482 199 7 0 5322 5520 12742856 12743054 4.410000e-86 329.0
16 TraesCS2D01G029400 chr2A 96.429 84 3 0 5819 5902 12743685 12743768 7.980000e-29 139.0
17 TraesCS2D01G029400 chr2A 93.243 74 3 2 5322 5393 13412473 13412546 2.250000e-19 108.0
18 TraesCS2D01G029400 chr2A 96.970 33 1 0 566 598 12614477 12614509 8.260000e-04 56.5
19 TraesCS2D01G029400 chr2B 85.456 2764 354 38 2231 4962 18722912 18720165 0.000000e+00 2833.0
20 TraesCS2D01G029400 chr2B 85.425 2765 354 39 2231 4962 18712954 18710206 0.000000e+00 2828.0
21 TraesCS2D01G029400 chr2B 83.227 781 95 22 1395 2144 18714528 18713753 0.000000e+00 684.0
22 TraesCS2D01G029400 chr2B 82.843 781 98 22 1395 2144 18724486 18723711 0.000000e+00 667.0
23 TraesCS2D01G029400 chr2B 77.563 517 108 7 41 552 59680849 59680336 7.430000e-79 305.0
24 TraesCS2D01G029400 chr2B 79.028 391 74 5 166 553 36453283 36452898 1.630000e-65 261.0
25 TraesCS2D01G029400 chrUn 85.420 2771 343 41 2229 4962 12443698 12440952 0.000000e+00 2822.0
26 TraesCS2D01G029400 chrUn 83.067 815 99 26 1423 2224 12444755 12443967 0.000000e+00 704.0
27 TraesCS2D01G029400 chrUn 80.994 342 48 11 1395 1722 332232651 332232989 7.590000e-64 255.0
28 TraesCS2D01G029400 chr4B 81.046 459 81 4 39 493 506321507 506321051 1.560000e-95 361.0
29 TraesCS2D01G029400 chr7B 82.222 405 67 5 150 553 103302064 103302464 1.570000e-90 344.0
30 TraesCS2D01G029400 chr7B 82.645 121 18 3 5322 5439 446643192 446643312 2.910000e-18 104.0
31 TraesCS2D01G029400 chr4A 78.394 523 102 7 39 555 468212906 468212389 4.410000e-86 329.0
32 TraesCS2D01G029400 chr4A 77.866 506 98 6 39 542 320272690 320273183 9.610000e-78 302.0
33 TraesCS2D01G029400 chr4A 80.469 128 20 4 5323 5447 628648203 628648328 6.300000e-15 93.5
34 TraesCS2D01G029400 chr7A 77.457 519 107 8 39 553 408693140 408692628 9.610000e-78 302.0
35 TraesCS2D01G029400 chr3A 79.227 414 78 8 142 553 50160746 50160339 1.250000e-71 281.0
36 TraesCS2D01G029400 chr5A 78.571 392 76 8 167 556 119679931 119679546 9.820000e-63 252.0
37 TraesCS2D01G029400 chr3B 87.069 116 12 3 5323 5435 792878030 792877915 1.730000e-25 128.0
38 TraesCS2D01G029400 chr3B 88.889 63 5 1 5253 5313 154009498 154009560 6.340000e-10 76.8
39 TraesCS2D01G029400 chr3B 85.294 68 8 2 5369 5434 792970610 792970543 1.060000e-07 69.4
40 TraesCS2D01G029400 chr3D 84.483 116 14 4 5321 5433 591726942 591727056 1.740000e-20 111.0
41 TraesCS2D01G029400 chr6A 97.674 43 0 1 5322 5363 563277884 563277926 8.200000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G029400 chr2D 12124691 12130592 5901 False 10900.0 10900 100.0000 1 5902 1 chr2D.!!$F2 5901
1 TraesCS2D01G029400 chr2D 12328469 12332788 4319 False 1787.5 3467 81.0480 979 4918 2 chr2D.!!$F3 3939
2 TraesCS2D01G029400 chr2D 12383910 12388160 4250 True 1732.0 2806 84.1575 1395 4915 2 chr2D.!!$R3 3520
3 TraesCS2D01G029400 chr2D 599946908 599948742 1834 True 497.0 497 72.4540 2261 4095 1 chr2D.!!$R2 1834
4 TraesCS2D01G029400 chr2A 12960477 12964728 4251 True 1753.5 2832 84.3765 1390 4915 2 chr2A.!!$R3 3525
5 TraesCS2D01G029400 chr2A 12737970 12743768 5798 False 1699.6 6970 95.3478 785 5902 5 chr2A.!!$F3 5117
6 TraesCS2D01G029400 chr2A 12524399 12524986 587 True 490.0 490 82.1550 3645 4222 1 chr2A.!!$R1 577
7 TraesCS2D01G029400 chr2A 733683898 733685722 1824 True 460.0 460 72.1840 2263 4092 1 chr2A.!!$R2 1829
8 TraesCS2D01G029400 chr2B 18710206 18714528 4322 True 1756.0 2828 84.3260 1395 4962 2 chr2B.!!$R3 3567
9 TraesCS2D01G029400 chr2B 18720165 18724486 4321 True 1750.0 2833 84.1495 1395 4962 2 chr2B.!!$R4 3567
10 TraesCS2D01G029400 chr2B 59680336 59680849 513 True 305.0 305 77.5630 41 552 1 chr2B.!!$R2 511
11 TraesCS2D01G029400 chrUn 12440952 12444755 3803 True 1763.0 2822 84.2435 1423 4962 2 chrUn.!!$R1 3539
12 TraesCS2D01G029400 chr4A 468212389 468212906 517 True 329.0 329 78.3940 39 555 1 chr4A.!!$R1 516
13 TraesCS2D01G029400 chr7A 408692628 408693140 512 True 302.0 302 77.4570 39 553 1 chr7A.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 975 0.034337 TACACGTGAAACCTGAGCCC 59.966 55.000 25.01 0.0 0.00 5.19 F
1031 1035 0.106519 ACACAAGCTGGTGCCTCTTT 60.107 50.000 21.62 0.0 42.55 2.52 F
1245 1268 0.107703 TTGAGTCCATAGCCTTGCCG 60.108 55.000 0.00 0.0 0.00 5.69 F
1255 1278 0.179001 AGCCTTGCCGGTTAGTTGTT 60.179 50.000 1.90 0.0 34.25 2.83 F
1285 1599 1.061546 TGGAAGGGGTACACTGGTTC 58.938 55.000 0.00 0.0 0.00 3.62 F
1288 1602 1.278413 GAAGGGGTACACTGGTTCCTC 59.722 57.143 0.00 0.0 35.28 3.71 F
1490 1936 3.460857 ACATCGCTCTCATAACCCTTC 57.539 47.619 0.00 0.0 0.00 3.46 F
3721 5227 0.598562 ACGAACTCTCTGATGCACGT 59.401 50.000 0.00 0.0 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1898 2389 2.354821 ACGTGTCAAGACCTTTCAAAGC 59.645 45.455 0.00 0.00 0.00 3.51 R
1991 2482 2.407340 AGACTGAAGCCTATAGGGGG 57.593 55.000 20.58 0.00 35.18 5.40 R
2169 2969 3.706086 AGCACCTTTCCTGTCAAATTTGT 59.294 39.130 17.47 0.00 0.00 2.83 R
3519 5011 4.221924 TGGTCAAATTACCTCTCGATGTGA 59.778 41.667 0.00 0.00 40.44 3.58 R
3685 5191 0.532862 CGTGAGTGGATATGGTGGCC 60.533 60.000 0.00 0.00 0.00 5.36 R
3721 5227 7.078011 TGCAATAGTTTTCGCACATGTAATA 57.922 32.000 0.00 0.00 0.00 0.98 R
4125 5652 5.096169 CACGTGGTAGTTATCAACTCAGAG 58.904 45.833 7.95 0.00 41.77 3.35 R
5526 7412 0.605319 GTTGATGTCTCGGCCCAACA 60.605 55.000 12.26 7.72 37.59 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.546972 GATTACTCCCAGCTAAAGCAATAC 57.453 41.667 4.54 0.00 45.16 1.89
24 25 3.283259 ACTCCCAGCTAAAGCAATACC 57.717 47.619 4.54 0.00 45.16 2.73
25 26 2.576191 ACTCCCAGCTAAAGCAATACCA 59.424 45.455 4.54 0.00 45.16 3.25
26 27 3.203040 ACTCCCAGCTAAAGCAATACCAT 59.797 43.478 4.54 0.00 45.16 3.55
27 28 3.817647 CTCCCAGCTAAAGCAATACCATC 59.182 47.826 4.54 0.00 45.16 3.51
28 29 3.459598 TCCCAGCTAAAGCAATACCATCT 59.540 43.478 4.54 0.00 45.16 2.90
29 30 4.658435 TCCCAGCTAAAGCAATACCATCTA 59.342 41.667 4.54 0.00 45.16 1.98
30 31 4.999950 CCCAGCTAAAGCAATACCATCTAG 59.000 45.833 4.54 0.00 45.16 2.43
31 32 4.453819 CCAGCTAAAGCAATACCATCTAGC 59.546 45.833 4.54 0.00 45.16 3.42
32 33 5.303971 CAGCTAAAGCAATACCATCTAGCT 58.696 41.667 4.54 0.00 45.16 3.32
33 34 5.762218 CAGCTAAAGCAATACCATCTAGCTT 59.238 40.000 4.54 0.00 46.49 3.74
34 35 5.762218 AGCTAAAGCAATACCATCTAGCTTG 59.238 40.000 4.54 0.00 44.03 4.01
35 36 5.529060 GCTAAAGCAATACCATCTAGCTTGT 59.471 40.000 0.00 0.00 44.03 3.16
36 37 6.293135 GCTAAAGCAATACCATCTAGCTTGTC 60.293 42.308 0.00 0.00 44.03 3.18
37 38 3.722147 AGCAATACCATCTAGCTTGTCG 58.278 45.455 0.00 0.00 29.98 4.35
45 46 1.448540 CTAGCTTGTCGGGTGCTGG 60.449 63.158 0.00 0.00 37.62 4.85
68 71 4.704103 AGGGCTGAGGTGGAGCGA 62.704 66.667 0.00 0.00 37.32 4.93
87 90 2.564771 GATGTTTCATCCTCCGCATCA 58.435 47.619 0.00 0.00 34.56 3.07
89 92 2.358957 TGTTTCATCCTCCGCATCAAG 58.641 47.619 0.00 0.00 0.00 3.02
102 105 1.002430 GCATCAAGGATGGCGGATCTA 59.998 52.381 8.18 0.00 40.10 1.98
107 110 2.574955 GGATGGCGGATCTAGGCGT 61.575 63.158 9.08 9.08 36.92 5.68
129 132 4.681978 GCGCAGTGGACTCGGGTT 62.682 66.667 0.30 0.00 0.00 4.11
132 135 1.227853 GCAGTGGACTCGGGTTGTT 60.228 57.895 0.00 0.00 0.00 2.83
137 140 0.682852 TGGACTCGGGTTGTTCGATT 59.317 50.000 0.00 0.00 36.01 3.34
138 141 1.071071 TGGACTCGGGTTGTTCGATTT 59.929 47.619 0.00 0.00 36.01 2.17
145 148 1.957877 GGGTTGTTCGATTTGGGTTGA 59.042 47.619 0.00 0.00 0.00 3.18
146 149 2.560981 GGGTTGTTCGATTTGGGTTGAT 59.439 45.455 0.00 0.00 0.00 2.57
158 161 1.815421 GGTTGATGGACTCGCGCAT 60.815 57.895 8.75 0.00 0.00 4.73
173 176 2.325082 GCATGAGGACGGCGTTGTT 61.325 57.895 16.19 2.24 0.00 2.83
188 191 2.589442 GTTTGGCGTCGTGGTGGA 60.589 61.111 0.00 0.00 0.00 4.02
189 192 2.181521 GTTTGGCGTCGTGGTGGAA 61.182 57.895 0.00 0.00 0.00 3.53
193 196 3.186047 GCGTCGTGGTGGAATCGG 61.186 66.667 0.00 0.00 0.00 4.18
194 197 3.186047 CGTCGTGGTGGAATCGGC 61.186 66.667 0.00 0.00 0.00 5.54
195 198 3.186047 GTCGTGGTGGAATCGGCG 61.186 66.667 0.00 0.00 0.00 6.46
196 199 4.444838 TCGTGGTGGAATCGGCGG 62.445 66.667 7.21 0.00 0.00 6.13
197 200 4.752879 CGTGGTGGAATCGGCGGT 62.753 66.667 7.21 0.00 0.00 5.68
198 201 2.580276 GTGGTGGAATCGGCGGTA 59.420 61.111 7.21 0.00 0.00 4.02
199 202 1.145377 GTGGTGGAATCGGCGGTAT 59.855 57.895 7.21 0.00 0.00 2.73
200 203 1.145156 TGGTGGAATCGGCGGTATG 59.855 57.895 7.21 0.00 0.00 2.39
201 204 1.145377 GGTGGAATCGGCGGTATGT 59.855 57.895 7.21 0.00 0.00 2.29
202 205 0.878961 GGTGGAATCGGCGGTATGTC 60.879 60.000 7.21 0.00 0.00 3.06
203 206 0.104304 GTGGAATCGGCGGTATGTCT 59.896 55.000 7.21 0.00 0.00 3.41
204 207 0.104120 TGGAATCGGCGGTATGTCTG 59.896 55.000 7.21 0.00 0.00 3.51
205 208 0.600255 GGAATCGGCGGTATGTCTGG 60.600 60.000 7.21 0.00 0.00 3.86
206 209 0.600255 GAATCGGCGGTATGTCTGGG 60.600 60.000 7.21 0.00 0.00 4.45
207 210 1.046472 AATCGGCGGTATGTCTGGGA 61.046 55.000 7.21 0.00 0.00 4.37
208 211 1.046472 ATCGGCGGTATGTCTGGGAA 61.046 55.000 7.21 0.00 0.00 3.97
209 212 1.227263 CGGCGGTATGTCTGGGAAG 60.227 63.158 0.00 0.00 0.00 3.46
210 213 1.146263 GGCGGTATGTCTGGGAAGG 59.854 63.158 0.00 0.00 0.00 3.46
211 214 1.623542 GGCGGTATGTCTGGGAAGGT 61.624 60.000 0.00 0.00 0.00 3.50
212 215 0.252197 GCGGTATGTCTGGGAAGGTT 59.748 55.000 0.00 0.00 0.00 3.50
213 216 2.012051 GCGGTATGTCTGGGAAGGTTG 61.012 57.143 0.00 0.00 0.00 3.77
214 217 1.553248 CGGTATGTCTGGGAAGGTTGA 59.447 52.381 0.00 0.00 0.00 3.18
215 218 2.170607 CGGTATGTCTGGGAAGGTTGAT 59.829 50.000 0.00 0.00 0.00 2.57
216 219 3.545703 GGTATGTCTGGGAAGGTTGATG 58.454 50.000 0.00 0.00 0.00 3.07
217 220 2.134789 ATGTCTGGGAAGGTTGATGC 57.865 50.000 0.00 0.00 0.00 3.91
218 221 0.770499 TGTCTGGGAAGGTTGATGCA 59.230 50.000 0.00 0.00 0.00 3.96
219 222 1.355381 TGTCTGGGAAGGTTGATGCAT 59.645 47.619 0.00 0.00 0.00 3.96
220 223 2.019984 GTCTGGGAAGGTTGATGCATC 58.980 52.381 20.14 20.14 0.00 3.91
221 224 1.019673 CTGGGAAGGTTGATGCATCG 58.980 55.000 21.34 0.00 0.00 3.84
222 225 0.394216 TGGGAAGGTTGATGCATCGG 60.394 55.000 21.34 0.00 0.00 4.18
223 226 0.394352 GGGAAGGTTGATGCATCGGT 60.394 55.000 21.34 4.78 0.00 4.69
224 227 1.134220 GGGAAGGTTGATGCATCGGTA 60.134 52.381 21.34 7.02 0.00 4.02
225 228 2.639065 GGAAGGTTGATGCATCGGTAA 58.361 47.619 21.34 7.97 0.00 2.85
226 229 2.354821 GGAAGGTTGATGCATCGGTAAC 59.645 50.000 21.34 18.49 0.00 2.50
227 230 3.270877 GAAGGTTGATGCATCGGTAACT 58.729 45.455 21.34 13.98 0.00 2.24
228 231 2.632377 AGGTTGATGCATCGGTAACTG 58.368 47.619 21.34 0.00 0.00 3.16
229 232 1.064060 GGTTGATGCATCGGTAACTGC 59.936 52.381 21.34 5.73 38.87 4.40
230 233 2.009774 GTTGATGCATCGGTAACTGCT 58.990 47.619 21.34 0.00 39.16 4.24
231 234 1.939974 TGATGCATCGGTAACTGCTC 58.060 50.000 21.34 0.00 39.16 4.26
232 235 1.482182 TGATGCATCGGTAACTGCTCT 59.518 47.619 21.34 0.00 39.16 4.09
233 236 1.863454 GATGCATCGGTAACTGCTCTG 59.137 52.381 11.68 0.00 39.16 3.35
234 237 0.894835 TGCATCGGTAACTGCTCTGA 59.105 50.000 0.00 0.00 39.16 3.27
235 238 1.275010 TGCATCGGTAACTGCTCTGAA 59.725 47.619 0.00 0.00 39.16 3.02
236 239 1.929836 GCATCGGTAACTGCTCTGAAG 59.070 52.381 0.00 0.00 35.49 3.02
237 240 2.544685 CATCGGTAACTGCTCTGAAGG 58.455 52.381 0.00 0.00 0.00 3.46
238 241 1.629043 TCGGTAACTGCTCTGAAGGT 58.371 50.000 0.00 0.00 0.00 3.50
239 242 2.799017 TCGGTAACTGCTCTGAAGGTA 58.201 47.619 0.00 0.00 0.00 3.08
240 243 2.753452 TCGGTAACTGCTCTGAAGGTAG 59.247 50.000 0.00 0.00 0.00 3.18
241 244 2.753452 CGGTAACTGCTCTGAAGGTAGA 59.247 50.000 0.00 0.00 0.00 2.59
242 245 3.381908 CGGTAACTGCTCTGAAGGTAGAT 59.618 47.826 0.00 0.00 0.00 1.98
243 246 4.498345 CGGTAACTGCTCTGAAGGTAGATC 60.498 50.000 0.00 0.00 0.00 2.75
244 247 3.791973 AACTGCTCTGAAGGTAGATCG 57.208 47.619 0.00 0.00 0.00 3.69
245 248 3.006112 ACTGCTCTGAAGGTAGATCGA 57.994 47.619 0.00 0.00 0.00 3.59
246 249 3.561143 ACTGCTCTGAAGGTAGATCGAT 58.439 45.455 0.00 0.00 0.00 3.59
247 250 3.317711 ACTGCTCTGAAGGTAGATCGATG 59.682 47.826 0.54 0.00 0.00 3.84
248 251 2.625314 TGCTCTGAAGGTAGATCGATGG 59.375 50.000 0.54 0.00 0.00 3.51
249 252 2.887783 GCTCTGAAGGTAGATCGATGGA 59.112 50.000 0.54 0.00 0.00 3.41
250 253 3.319405 GCTCTGAAGGTAGATCGATGGAA 59.681 47.826 0.54 0.00 0.00 3.53
251 254 4.558496 GCTCTGAAGGTAGATCGATGGAAG 60.558 50.000 0.54 0.00 0.00 3.46
252 255 4.793201 TCTGAAGGTAGATCGATGGAAGA 58.207 43.478 0.54 0.00 0.00 2.87
253 256 5.389520 TCTGAAGGTAGATCGATGGAAGAT 58.610 41.667 0.54 0.00 0.00 2.40
254 257 5.242615 TCTGAAGGTAGATCGATGGAAGATG 59.757 44.000 0.54 0.00 0.00 2.90
255 258 4.281941 TGAAGGTAGATCGATGGAAGATGG 59.718 45.833 0.54 0.00 0.00 3.51
256 259 2.564947 AGGTAGATCGATGGAAGATGGC 59.435 50.000 0.54 0.00 0.00 4.40
257 260 2.300152 GGTAGATCGATGGAAGATGGCA 59.700 50.000 0.54 0.00 0.00 4.92
258 261 2.540265 AGATCGATGGAAGATGGCAC 57.460 50.000 0.54 0.00 0.00 5.01
259 262 1.071385 AGATCGATGGAAGATGGCACC 59.929 52.381 0.54 0.00 0.00 5.01
260 263 0.250038 ATCGATGGAAGATGGCACCG 60.250 55.000 0.00 0.00 0.00 4.94
261 264 1.889105 CGATGGAAGATGGCACCGG 60.889 63.158 0.00 0.00 0.00 5.28
262 265 2.124151 ATGGAAGATGGCACCGGC 60.124 61.111 0.00 0.00 40.13 6.13
263 266 2.891941 GATGGAAGATGGCACCGGCA 62.892 60.000 0.00 0.00 43.71 5.69
264 267 2.825836 GGAAGATGGCACCGGCAG 60.826 66.667 0.00 0.00 42.43 4.85
265 268 2.045926 GAAGATGGCACCGGCAGT 60.046 61.111 0.00 0.00 42.43 4.40
266 269 2.045926 AAGATGGCACCGGCAGTC 60.046 61.111 0.00 0.00 42.43 3.51
267 270 3.628646 AAGATGGCACCGGCAGTCC 62.629 63.158 0.00 1.05 42.43 3.85
272 275 4.767255 GCACCGGCAGTCCCTGAG 62.767 72.222 0.00 0.00 40.72 3.35
273 276 2.997315 CACCGGCAGTCCCTGAGA 60.997 66.667 0.00 0.00 32.44 3.27
274 277 2.681778 ACCGGCAGTCCCTGAGAG 60.682 66.667 0.00 0.00 32.44 3.20
275 278 2.681778 CCGGCAGTCCCTGAGAGT 60.682 66.667 0.00 0.00 32.44 3.24
277 280 2.279069 CGGCAGTCCCTGAGAGTGT 61.279 63.158 0.00 0.00 46.20 3.55
278 281 1.294780 GGCAGTCCCTGAGAGTGTG 59.705 63.158 0.00 0.00 46.20 3.82
279 282 1.375268 GCAGTCCCTGAGAGTGTGC 60.375 63.158 0.00 0.00 46.20 4.57
280 283 1.294780 CAGTCCCTGAGAGTGTGCC 59.705 63.158 0.00 0.00 40.54 5.01
281 284 1.152247 AGTCCCTGAGAGTGTGCCA 60.152 57.895 0.00 0.00 0.00 4.92
282 285 0.764369 AGTCCCTGAGAGTGTGCCAA 60.764 55.000 0.00 0.00 0.00 4.52
283 286 0.108585 GTCCCTGAGAGTGTGCCAAA 59.891 55.000 0.00 0.00 0.00 3.28
284 287 0.108585 TCCCTGAGAGTGTGCCAAAC 59.891 55.000 0.00 0.00 0.00 2.93
285 288 0.890996 CCCTGAGAGTGTGCCAAACC 60.891 60.000 0.00 0.00 0.00 3.27
286 289 1.230635 CCTGAGAGTGTGCCAAACCG 61.231 60.000 0.00 0.00 0.00 4.44
287 290 1.227823 TGAGAGTGTGCCAAACCGG 60.228 57.895 0.00 0.00 38.11 5.28
288 291 1.227853 GAGAGTGTGCCAAACCGGT 60.228 57.895 0.00 0.00 36.97 5.28
289 292 1.227853 AGAGTGTGCCAAACCGGTC 60.228 57.895 8.04 0.00 36.97 4.79
290 293 1.227853 GAGTGTGCCAAACCGGTCT 60.228 57.895 8.04 0.00 36.97 3.85
291 294 1.507141 GAGTGTGCCAAACCGGTCTG 61.507 60.000 8.04 3.31 36.97 3.51
292 295 1.822186 GTGTGCCAAACCGGTCTGT 60.822 57.895 8.04 0.00 36.97 3.41
293 296 1.821759 TGTGCCAAACCGGTCTGTG 60.822 57.895 8.04 6.74 36.97 3.66
294 297 2.904866 TGCCAAACCGGTCTGTGC 60.905 61.111 8.04 11.14 36.97 4.57
295 298 3.670377 GCCAAACCGGTCTGTGCC 61.670 66.667 8.04 0.00 36.97 5.01
296 299 2.983592 CCAAACCGGTCTGTGCCC 60.984 66.667 8.04 0.00 0.00 5.36
297 300 2.983592 CAAACCGGTCTGTGCCCC 60.984 66.667 8.04 0.00 0.00 5.80
298 301 3.494254 AAACCGGTCTGTGCCCCA 61.494 61.111 8.04 0.00 0.00 4.96
299 302 3.491598 AAACCGGTCTGTGCCCCAG 62.492 63.158 8.04 0.00 42.97 4.45
305 308 4.631740 TCTGTGCCCCAGACCCGA 62.632 66.667 0.00 0.00 45.34 5.14
306 309 3.636231 CTGTGCCCCAGACCCGAA 61.636 66.667 0.00 0.00 44.49 4.30
307 310 3.172106 TGTGCCCCAGACCCGAAA 61.172 61.111 0.00 0.00 0.00 3.46
308 311 2.114411 GTGCCCCAGACCCGAAAA 59.886 61.111 0.00 0.00 0.00 2.29
309 312 1.304134 GTGCCCCAGACCCGAAAAT 60.304 57.895 0.00 0.00 0.00 1.82
310 313 1.304052 TGCCCCAGACCCGAAAATG 60.304 57.895 0.00 0.00 0.00 2.32
311 314 1.304134 GCCCCAGACCCGAAAATGT 60.304 57.895 0.00 0.00 0.00 2.71
312 315 1.595093 GCCCCAGACCCGAAAATGTG 61.595 60.000 0.00 0.00 0.00 3.21
313 316 0.965363 CCCCAGACCCGAAAATGTGG 60.965 60.000 0.00 0.00 0.00 4.17
314 317 1.595093 CCCAGACCCGAAAATGTGGC 61.595 60.000 0.00 0.00 0.00 5.01
315 318 0.609131 CCAGACCCGAAAATGTGGCT 60.609 55.000 0.00 0.00 0.00 4.75
316 319 1.247567 CAGACCCGAAAATGTGGCTT 58.752 50.000 0.00 0.00 0.00 4.35
317 320 1.068333 CAGACCCGAAAATGTGGCTTG 60.068 52.381 0.00 0.00 0.00 4.01
318 321 0.243636 GACCCGAAAATGTGGCTTGG 59.756 55.000 0.00 0.00 0.00 3.61
319 322 0.469144 ACCCGAAAATGTGGCTTGGT 60.469 50.000 0.00 0.00 0.00 3.67
320 323 0.678950 CCCGAAAATGTGGCTTGGTT 59.321 50.000 0.00 0.00 0.00 3.67
321 324 1.605202 CCCGAAAATGTGGCTTGGTTG 60.605 52.381 0.00 0.00 0.00 3.77
322 325 1.339610 CCGAAAATGTGGCTTGGTTGA 59.660 47.619 0.00 0.00 0.00 3.18
323 326 2.607771 CCGAAAATGTGGCTTGGTTGAG 60.608 50.000 0.00 0.00 0.00 3.02
324 327 2.607771 CGAAAATGTGGCTTGGTTGAGG 60.608 50.000 0.00 0.00 0.00 3.86
325 328 0.681175 AAATGTGGCTTGGTTGAGGC 59.319 50.000 0.00 0.00 42.15 4.70
326 329 1.187567 AATGTGGCTTGGTTGAGGCC 61.188 55.000 0.00 0.00 45.45 5.19
327 330 2.085343 ATGTGGCTTGGTTGAGGCCT 62.085 55.000 3.86 3.86 45.45 5.19
328 331 1.973812 GTGGCTTGGTTGAGGCCTC 60.974 63.158 26.78 26.78 45.45 4.70
329 332 2.361737 GGCTTGGTTGAGGCCTCC 60.362 66.667 29.95 16.26 42.31 4.30
330 333 2.747855 GCTTGGTTGAGGCCTCCG 60.748 66.667 29.95 11.82 0.00 4.63
331 334 2.045926 CTTGGTTGAGGCCTCCGG 60.046 66.667 29.95 8.63 0.00 5.14
332 335 2.852075 TTGGTTGAGGCCTCCGGT 60.852 61.111 29.95 0.00 0.00 5.28
333 336 2.411765 CTTGGTTGAGGCCTCCGGTT 62.412 60.000 29.95 0.00 0.00 4.44
334 337 2.002018 TTGGTTGAGGCCTCCGGTTT 62.002 55.000 29.95 0.00 0.00 3.27
335 338 1.228459 GGTTGAGGCCTCCGGTTTT 60.228 57.895 29.95 0.00 0.00 2.43
336 339 0.037160 GGTTGAGGCCTCCGGTTTTA 59.963 55.000 29.95 6.44 0.00 1.52
337 340 1.450025 GTTGAGGCCTCCGGTTTTAG 58.550 55.000 29.95 0.00 0.00 1.85
338 341 1.002773 GTTGAGGCCTCCGGTTTTAGA 59.997 52.381 29.95 4.78 0.00 2.10
339 342 1.580059 TGAGGCCTCCGGTTTTAGAT 58.420 50.000 29.95 0.00 0.00 1.98
340 343 1.209504 TGAGGCCTCCGGTTTTAGATG 59.790 52.381 29.95 0.00 0.00 2.90
341 344 1.209747 GAGGCCTCCGGTTTTAGATGT 59.790 52.381 23.19 0.00 0.00 3.06
342 345 1.633945 AGGCCTCCGGTTTTAGATGTT 59.366 47.619 0.00 0.00 0.00 2.71
343 346 2.841881 AGGCCTCCGGTTTTAGATGTTA 59.158 45.455 0.00 0.00 0.00 2.41
344 347 3.118371 AGGCCTCCGGTTTTAGATGTTAG 60.118 47.826 0.00 0.00 0.00 2.34
345 348 3.203716 GCCTCCGGTTTTAGATGTTAGG 58.796 50.000 0.00 0.00 0.00 2.69
346 349 3.203716 CCTCCGGTTTTAGATGTTAGGC 58.796 50.000 0.00 0.00 0.00 3.93
347 350 3.118371 CCTCCGGTTTTAGATGTTAGGCT 60.118 47.826 0.00 0.00 0.00 4.58
348 351 4.514401 CTCCGGTTTTAGATGTTAGGCTT 58.486 43.478 0.00 0.00 0.00 4.35
349 352 4.913784 TCCGGTTTTAGATGTTAGGCTTT 58.086 39.130 0.00 0.00 0.00 3.51
350 353 4.698304 TCCGGTTTTAGATGTTAGGCTTTG 59.302 41.667 0.00 0.00 0.00 2.77
351 354 4.142469 CCGGTTTTAGATGTTAGGCTTTGG 60.142 45.833 0.00 0.00 0.00 3.28
352 355 4.457949 CGGTTTTAGATGTTAGGCTTTGGT 59.542 41.667 0.00 0.00 0.00 3.67
353 356 5.619086 CGGTTTTAGATGTTAGGCTTTGGTG 60.619 44.000 0.00 0.00 0.00 4.17
354 357 5.161358 GTTTTAGATGTTAGGCTTTGGTGC 58.839 41.667 0.00 0.00 0.00 5.01
355 358 1.453155 AGATGTTAGGCTTTGGTGCG 58.547 50.000 0.00 0.00 0.00 5.34
356 359 1.003118 AGATGTTAGGCTTTGGTGCGA 59.997 47.619 0.00 0.00 0.00 5.10
357 360 1.810151 GATGTTAGGCTTTGGTGCGAA 59.190 47.619 0.00 0.00 0.00 4.70
358 361 1.234821 TGTTAGGCTTTGGTGCGAAG 58.765 50.000 0.00 0.00 0.00 3.79
359 362 1.235724 GTTAGGCTTTGGTGCGAAGT 58.764 50.000 0.00 0.00 0.00 3.01
360 363 1.607148 GTTAGGCTTTGGTGCGAAGTT 59.393 47.619 0.00 0.00 0.00 2.66
361 364 1.975660 TAGGCTTTGGTGCGAAGTTT 58.024 45.000 0.00 0.00 0.00 2.66
362 365 0.385390 AGGCTTTGGTGCGAAGTTTG 59.615 50.000 0.00 0.00 0.00 2.93
363 366 0.597377 GGCTTTGGTGCGAAGTTTGG 60.597 55.000 0.00 0.00 0.00 3.28
364 367 0.102300 GCTTTGGTGCGAAGTTTGGT 59.898 50.000 0.00 0.00 0.00 3.67
365 368 1.470805 GCTTTGGTGCGAAGTTTGGTT 60.471 47.619 0.00 0.00 0.00 3.67
366 369 2.192624 CTTTGGTGCGAAGTTTGGTTG 58.807 47.619 0.00 0.00 0.00 3.77
367 370 0.457851 TTGGTGCGAAGTTTGGTTGG 59.542 50.000 0.00 0.00 0.00 3.77
368 371 0.681564 TGGTGCGAAGTTTGGTTGGT 60.682 50.000 0.00 0.00 0.00 3.67
369 372 1.310904 GGTGCGAAGTTTGGTTGGTA 58.689 50.000 0.00 0.00 0.00 3.25
370 373 1.883926 GGTGCGAAGTTTGGTTGGTAT 59.116 47.619 0.00 0.00 0.00 2.73
371 374 2.295070 GGTGCGAAGTTTGGTTGGTATT 59.705 45.455 0.00 0.00 0.00 1.89
372 375 3.561503 GTGCGAAGTTTGGTTGGTATTC 58.438 45.455 0.00 0.00 0.00 1.75
373 376 3.252458 GTGCGAAGTTTGGTTGGTATTCT 59.748 43.478 0.00 0.00 0.00 2.40
374 377 3.252215 TGCGAAGTTTGGTTGGTATTCTG 59.748 43.478 0.00 0.00 0.00 3.02
375 378 3.821841 CGAAGTTTGGTTGGTATTCTGC 58.178 45.455 0.00 0.00 0.00 4.26
376 379 3.502211 CGAAGTTTGGTTGGTATTCTGCT 59.498 43.478 0.00 0.00 0.00 4.24
377 380 4.378459 CGAAGTTTGGTTGGTATTCTGCTC 60.378 45.833 0.00 0.00 0.00 4.26
378 381 4.098914 AGTTTGGTTGGTATTCTGCTCA 57.901 40.909 0.00 0.00 0.00 4.26
379 382 4.074970 AGTTTGGTTGGTATTCTGCTCAG 58.925 43.478 0.00 0.00 0.00 3.35
380 383 4.072131 GTTTGGTTGGTATTCTGCTCAGA 58.928 43.478 0.00 0.00 35.27 3.27
381 384 3.334583 TGGTTGGTATTCTGCTCAGAC 57.665 47.619 0.00 0.00 37.14 3.51
382 385 2.906389 TGGTTGGTATTCTGCTCAGACT 59.094 45.455 0.00 0.00 37.14 3.24
383 386 4.093743 TGGTTGGTATTCTGCTCAGACTA 58.906 43.478 0.00 0.00 37.14 2.59
384 387 4.716784 TGGTTGGTATTCTGCTCAGACTAT 59.283 41.667 0.00 0.00 37.14 2.12
385 388 5.897250 TGGTTGGTATTCTGCTCAGACTATA 59.103 40.000 0.00 0.00 37.14 1.31
386 389 6.040955 TGGTTGGTATTCTGCTCAGACTATAG 59.959 42.308 0.00 0.00 37.14 1.31
387 390 6.451393 GTTGGTATTCTGCTCAGACTATAGG 58.549 44.000 4.43 0.00 37.14 2.57
388 391 4.524714 TGGTATTCTGCTCAGACTATAGGC 59.475 45.833 4.43 0.00 37.14 3.93
389 392 4.524714 GGTATTCTGCTCAGACTATAGGCA 59.475 45.833 8.68 4.45 37.14 4.75
390 393 4.599047 ATTCTGCTCAGACTATAGGCAC 57.401 45.455 8.68 0.00 37.14 5.01
391 394 2.311463 TCTGCTCAGACTATAGGCACC 58.689 52.381 8.68 0.00 31.41 5.01
392 395 1.342819 CTGCTCAGACTATAGGCACCC 59.657 57.143 8.68 0.00 0.00 4.61
393 396 0.682292 GCTCAGACTATAGGCACCCC 59.318 60.000 8.68 0.00 0.00 4.95
394 397 1.759562 GCTCAGACTATAGGCACCCCT 60.760 57.143 8.68 0.00 45.61 4.79
395 398 2.683768 CTCAGACTATAGGCACCCCTT 58.316 52.381 8.68 0.00 42.87 3.95
396 399 2.630580 CTCAGACTATAGGCACCCCTTC 59.369 54.545 8.68 0.00 42.87 3.46
397 400 2.023404 TCAGACTATAGGCACCCCTTCA 60.023 50.000 8.68 0.00 42.87 3.02
398 401 2.975489 CAGACTATAGGCACCCCTTCAT 59.025 50.000 8.68 0.00 42.87 2.57
399 402 3.007398 CAGACTATAGGCACCCCTTCATC 59.993 52.174 8.68 0.00 42.87 2.92
400 403 2.972713 GACTATAGGCACCCCTTCATCA 59.027 50.000 0.00 0.00 42.87 3.07
401 404 2.975489 ACTATAGGCACCCCTTCATCAG 59.025 50.000 4.43 0.00 42.87 2.90
402 405 1.898863 ATAGGCACCCCTTCATCAGT 58.101 50.000 0.00 0.00 42.87 3.41
403 406 1.668826 TAGGCACCCCTTCATCAGTT 58.331 50.000 0.00 0.00 42.87 3.16
404 407 0.038744 AGGCACCCCTTCATCAGTTG 59.961 55.000 0.00 0.00 38.74 3.16
405 408 0.967380 GGCACCCCTTCATCAGTTGG 60.967 60.000 0.00 0.00 0.00 3.77
406 409 0.038166 GCACCCCTTCATCAGTTGGA 59.962 55.000 0.00 0.00 0.00 3.53
407 410 1.341383 GCACCCCTTCATCAGTTGGAT 60.341 52.381 0.00 0.00 36.39 3.41
408 411 2.092429 GCACCCCTTCATCAGTTGGATA 60.092 50.000 0.00 0.00 33.95 2.59
409 412 3.813443 CACCCCTTCATCAGTTGGATAG 58.187 50.000 0.00 0.00 33.95 2.08
410 413 2.780010 ACCCCTTCATCAGTTGGATAGG 59.220 50.000 0.00 0.00 33.95 2.57
411 414 3.048600 CCCCTTCATCAGTTGGATAGGA 58.951 50.000 0.00 0.00 34.78 2.94
412 415 3.072184 CCCCTTCATCAGTTGGATAGGAG 59.928 52.174 0.00 0.00 34.78 3.69
413 416 3.713764 CCCTTCATCAGTTGGATAGGAGT 59.286 47.826 0.00 0.00 34.78 3.85
414 417 4.901849 CCCTTCATCAGTTGGATAGGAGTA 59.098 45.833 0.00 0.00 34.78 2.59
415 418 5.221541 CCCTTCATCAGTTGGATAGGAGTAC 60.222 48.000 0.00 0.00 34.78 2.73
416 419 5.221541 CCTTCATCAGTTGGATAGGAGTACC 60.222 48.000 0.00 0.00 34.78 3.34
417 420 3.889538 TCATCAGTTGGATAGGAGTACCG 59.110 47.826 0.00 0.00 36.13 4.02
418 421 3.657398 TCAGTTGGATAGGAGTACCGA 57.343 47.619 0.00 0.00 41.83 4.69
419 422 3.285484 TCAGTTGGATAGGAGTACCGAC 58.715 50.000 0.00 0.00 41.83 4.79
420 423 3.021695 CAGTTGGATAGGAGTACCGACA 58.978 50.000 0.00 0.00 39.70 4.35
421 424 3.066900 CAGTTGGATAGGAGTACCGACAG 59.933 52.174 0.00 0.00 39.70 3.51
422 425 3.053842 AGTTGGATAGGAGTACCGACAGA 60.054 47.826 0.00 0.00 39.70 3.41
423 426 3.657398 TGGATAGGAGTACCGACAGAA 57.343 47.619 0.00 0.00 41.83 3.02
424 427 3.552875 TGGATAGGAGTACCGACAGAAG 58.447 50.000 0.00 0.00 41.83 2.85
425 428 3.053842 TGGATAGGAGTACCGACAGAAGT 60.054 47.826 0.00 0.00 41.83 3.01
426 429 3.952967 GGATAGGAGTACCGACAGAAGTT 59.047 47.826 0.00 0.00 41.83 2.66
427 430 5.128919 GGATAGGAGTACCGACAGAAGTTA 58.871 45.833 0.00 0.00 41.83 2.24
428 431 5.769162 GGATAGGAGTACCGACAGAAGTTAT 59.231 44.000 0.00 0.00 41.83 1.89
429 432 6.072563 GGATAGGAGTACCGACAGAAGTTATC 60.073 46.154 0.00 0.00 41.83 1.75
430 433 3.626670 AGGAGTACCGACAGAAGTTATCG 59.373 47.826 0.00 0.00 41.83 2.92
431 434 3.624861 GGAGTACCGACAGAAGTTATCGA 59.375 47.826 5.48 0.00 38.10 3.59
432 435 4.260702 GGAGTACCGACAGAAGTTATCGAG 60.261 50.000 5.48 0.22 38.10 4.04
433 436 4.511527 AGTACCGACAGAAGTTATCGAGA 58.488 43.478 5.48 0.00 38.10 4.04
434 437 3.761311 ACCGACAGAAGTTATCGAGAC 57.239 47.619 5.48 0.00 38.10 3.36
435 438 3.079578 ACCGACAGAAGTTATCGAGACA 58.920 45.455 5.48 0.00 38.10 3.41
436 439 3.127203 ACCGACAGAAGTTATCGAGACAG 59.873 47.826 5.48 0.00 38.10 3.51
437 440 3.127203 CCGACAGAAGTTATCGAGACAGT 59.873 47.826 5.48 0.00 38.10 3.55
438 441 4.092120 CGACAGAAGTTATCGAGACAGTG 58.908 47.826 4.76 0.00 38.10 3.66
439 442 4.416620 GACAGAAGTTATCGAGACAGTGG 58.583 47.826 0.00 0.00 0.00 4.00
440 443 3.827302 ACAGAAGTTATCGAGACAGTGGT 59.173 43.478 0.00 0.00 0.00 4.16
441 444 4.281182 ACAGAAGTTATCGAGACAGTGGTT 59.719 41.667 0.00 0.00 0.00 3.67
442 445 5.221461 ACAGAAGTTATCGAGACAGTGGTTT 60.221 40.000 0.00 0.00 0.00 3.27
443 446 5.696724 CAGAAGTTATCGAGACAGTGGTTTT 59.303 40.000 0.00 0.00 0.00 2.43
444 447 6.866770 CAGAAGTTATCGAGACAGTGGTTTTA 59.133 38.462 0.00 0.00 0.00 1.52
445 448 7.384115 CAGAAGTTATCGAGACAGTGGTTTTAA 59.616 37.037 0.00 0.00 0.00 1.52
446 449 7.929785 AGAAGTTATCGAGACAGTGGTTTTAAA 59.070 33.333 0.00 0.00 0.00 1.52
447 450 7.417496 AGTTATCGAGACAGTGGTTTTAAAC 57.583 36.000 0.00 0.00 0.00 2.01
448 451 7.215085 AGTTATCGAGACAGTGGTTTTAAACT 58.785 34.615 7.79 0.00 0.00 2.66
449 452 7.713942 AGTTATCGAGACAGTGGTTTTAAACTT 59.286 33.333 7.79 0.00 0.00 2.66
450 453 8.981647 GTTATCGAGACAGTGGTTTTAAACTTA 58.018 33.333 7.79 0.00 0.00 2.24
451 454 6.833342 TCGAGACAGTGGTTTTAAACTTAC 57.167 37.500 7.79 7.54 0.00 2.34
452 455 6.576185 TCGAGACAGTGGTTTTAAACTTACT 58.424 36.000 7.79 9.49 32.05 2.24
453 456 6.477688 TCGAGACAGTGGTTTTAAACTTACTG 59.522 38.462 26.99 26.99 44.41 2.74
454 457 6.477688 CGAGACAGTGGTTTTAAACTTACTGA 59.522 38.462 31.18 5.14 43.04 3.41
455 458 7.170998 CGAGACAGTGGTTTTAAACTTACTGAT 59.829 37.037 31.18 24.02 43.04 2.90
456 459 9.485206 GAGACAGTGGTTTTAAACTTACTGATA 57.515 33.333 31.18 4.65 43.04 2.15
509 512 7.856492 TTCATAAAATGATTGTATGCATCGC 57.144 32.000 0.19 0.00 39.39 4.58
510 513 6.380995 TCATAAAATGATTGTATGCATCGCC 58.619 36.000 0.19 0.00 33.59 5.54
511 514 3.648339 AAATGATTGTATGCATCGCCC 57.352 42.857 0.19 0.00 0.00 6.13
512 515 2.275134 ATGATTGTATGCATCGCCCA 57.725 45.000 0.19 0.00 0.00 5.36
513 516 1.596603 TGATTGTATGCATCGCCCAG 58.403 50.000 0.19 0.00 0.00 4.45
514 517 1.140652 TGATTGTATGCATCGCCCAGA 59.859 47.619 0.19 0.00 0.00 3.86
515 518 2.224597 TGATTGTATGCATCGCCCAGAT 60.225 45.455 0.19 0.00 41.01 2.90
522 525 4.794199 ATCGCCCAGATGCAGATG 57.206 55.556 0.00 0.00 38.36 2.90
523 526 1.600076 ATCGCCCAGATGCAGATGC 60.600 57.895 0.00 0.00 38.36 3.91
524 527 3.285215 CGCCCAGATGCAGATGCC 61.285 66.667 1.72 0.00 41.18 4.40
525 528 2.910994 GCCCAGATGCAGATGCCC 60.911 66.667 1.72 0.00 41.18 5.36
526 529 2.593725 CCCAGATGCAGATGCCCG 60.594 66.667 1.72 0.00 41.18 6.13
527 530 2.593725 CCAGATGCAGATGCCCGG 60.594 66.667 1.72 0.00 41.18 5.73
528 531 2.593725 CAGATGCAGATGCCCGGG 60.594 66.667 19.09 19.09 41.18 5.73
529 532 3.882326 AGATGCAGATGCCCGGGG 61.882 66.667 25.28 9.31 41.18 5.73
530 533 4.195334 GATGCAGATGCCCGGGGT 62.195 66.667 25.28 0.00 41.18 4.95
531 534 4.195334 ATGCAGATGCCCGGGGTC 62.195 66.667 25.28 6.94 41.18 4.46
533 536 4.195334 GCAGATGCCCGGGGTCAT 62.195 66.667 25.28 18.45 34.31 3.06
534 537 2.111878 CAGATGCCCGGGGTCATC 59.888 66.667 28.49 28.49 36.89 2.92
535 538 3.171388 AGATGCCCGGGGTCATCC 61.171 66.667 30.32 19.82 37.13 3.51
536 539 3.171388 GATGCCCGGGGTCATCCT 61.171 66.667 26.83 9.47 33.43 3.24
537 540 3.171388 ATGCCCGGGGTCATCCTC 61.171 66.667 25.28 2.52 35.33 3.71
540 543 2.366972 CCCGGGGTCATCCTCCTT 60.367 66.667 14.71 0.00 35.33 3.36
541 544 2.001269 CCCGGGGTCATCCTCCTTT 61.001 63.158 14.71 0.00 35.33 3.11
542 545 1.571773 CCCGGGGTCATCCTCCTTTT 61.572 60.000 14.71 0.00 35.33 2.27
543 546 0.107165 CCGGGGTCATCCTCCTTTTC 60.107 60.000 0.00 0.00 35.33 2.29
544 547 0.618458 CGGGGTCATCCTCCTTTTCA 59.382 55.000 0.00 0.00 35.33 2.69
545 548 1.004277 CGGGGTCATCCTCCTTTTCAA 59.996 52.381 0.00 0.00 35.33 2.69
546 549 2.554344 CGGGGTCATCCTCCTTTTCAAA 60.554 50.000 0.00 0.00 35.33 2.69
547 550 3.506398 GGGGTCATCCTCCTTTTCAAAA 58.494 45.455 0.00 0.00 35.33 2.44
548 551 3.901222 GGGGTCATCCTCCTTTTCAAAAA 59.099 43.478 0.00 0.00 35.33 1.94
549 552 4.532126 GGGGTCATCCTCCTTTTCAAAAAT 59.468 41.667 0.00 0.00 35.33 1.82
550 553 5.719563 GGGGTCATCCTCCTTTTCAAAAATA 59.280 40.000 0.00 0.00 35.33 1.40
551 554 6.212589 GGGGTCATCCTCCTTTTCAAAAATAA 59.787 38.462 0.00 0.00 35.33 1.40
552 555 7.256511 GGGGTCATCCTCCTTTTCAAAAATAAA 60.257 37.037 0.00 0.00 35.33 1.40
553 556 8.154203 GGGTCATCCTCCTTTTCAAAAATAAAA 58.846 33.333 0.00 0.00 0.00 1.52
554 557 9.554395 GGTCATCCTCCTTTTCAAAAATAAAAA 57.446 29.630 0.00 0.00 0.00 1.94
581 584 7.793927 AAATAGTAATCTAGCTTCCACTTGC 57.206 36.000 0.00 0.00 0.00 4.01
582 585 4.826274 AGTAATCTAGCTTCCACTTGCA 57.174 40.909 0.00 0.00 0.00 4.08
583 586 4.764172 AGTAATCTAGCTTCCACTTGCAG 58.236 43.478 0.00 0.00 0.00 4.41
584 587 2.035530 ATCTAGCTTCCACTTGCAGC 57.964 50.000 0.00 0.00 0.00 5.25
585 588 0.686789 TCTAGCTTCCACTTGCAGCA 59.313 50.000 0.00 0.00 35.88 4.41
586 589 0.801251 CTAGCTTCCACTTGCAGCAC 59.199 55.000 0.00 0.00 35.88 4.40
587 590 0.950555 TAGCTTCCACTTGCAGCACG 60.951 55.000 0.00 0.00 35.88 5.34
588 591 2.546494 GCTTCCACTTGCAGCACGT 61.546 57.895 0.00 0.00 33.45 4.49
589 592 1.280746 CTTCCACTTGCAGCACGTG 59.719 57.895 22.21 22.21 34.15 4.49
598 601 4.360027 CAGCACGTGCACGCAGAC 62.360 66.667 39.21 23.52 45.16 3.51
601 604 3.705638 CACGTGCACGCAGACCTG 61.706 66.667 37.35 23.25 44.43 4.00
602 605 3.911698 ACGTGCACGCAGACCTGA 61.912 61.111 37.35 0.00 44.43 3.86
603 606 3.108289 CGTGCACGCAGACCTGAG 61.108 66.667 28.16 0.00 36.43 3.35
604 607 2.340078 GTGCACGCAGACCTGAGA 59.660 61.111 0.00 0.00 34.42 3.27
605 608 1.079543 GTGCACGCAGACCTGAGAT 60.080 57.895 0.00 0.00 34.42 2.75
606 609 1.079612 TGCACGCAGACCTGAGATG 60.080 57.895 7.73 4.02 34.42 2.90
607 610 2.459442 GCACGCAGACCTGAGATGC 61.459 63.158 7.73 9.34 36.60 3.91
608 611 1.812922 CACGCAGACCTGAGATGCC 60.813 63.158 7.73 0.00 36.60 4.40
609 612 2.285773 ACGCAGACCTGAGATGCCA 61.286 57.895 7.73 0.00 36.60 4.92
610 613 1.078918 CGCAGACCTGAGATGCCAA 60.079 57.895 0.47 0.00 36.60 4.52
611 614 0.674581 CGCAGACCTGAGATGCCAAA 60.675 55.000 0.47 0.00 36.60 3.28
612 615 1.093159 GCAGACCTGAGATGCCAAAG 58.907 55.000 0.47 0.00 33.81 2.77
613 616 1.339438 GCAGACCTGAGATGCCAAAGA 60.339 52.381 0.47 0.00 33.81 2.52
614 617 2.630158 CAGACCTGAGATGCCAAAGAG 58.370 52.381 0.00 0.00 0.00 2.85
615 618 2.235650 CAGACCTGAGATGCCAAAGAGA 59.764 50.000 0.00 0.00 0.00 3.10
616 619 2.909006 AGACCTGAGATGCCAAAGAGAA 59.091 45.455 0.00 0.00 0.00 2.87
617 620 3.522750 AGACCTGAGATGCCAAAGAGAAT 59.477 43.478 0.00 0.00 0.00 2.40
618 621 3.618351 ACCTGAGATGCCAAAGAGAATG 58.382 45.455 0.00 0.00 0.00 2.67
619 622 2.358267 CCTGAGATGCCAAAGAGAATGC 59.642 50.000 0.00 0.00 0.00 3.56
620 623 2.011947 TGAGATGCCAAAGAGAATGCG 58.988 47.619 0.00 0.00 0.00 4.73
621 624 2.012673 GAGATGCCAAAGAGAATGCGT 58.987 47.619 0.00 0.00 0.00 5.24
622 625 3.198068 GAGATGCCAAAGAGAATGCGTA 58.802 45.455 0.00 0.00 0.00 4.42
623 626 3.201290 AGATGCCAAAGAGAATGCGTAG 58.799 45.455 0.00 0.00 0.00 3.51
624 627 2.760634 TGCCAAAGAGAATGCGTAGA 57.239 45.000 0.00 0.00 0.00 2.59
625 628 3.052455 TGCCAAAGAGAATGCGTAGAA 57.948 42.857 0.00 0.00 0.00 2.10
626 629 3.002791 TGCCAAAGAGAATGCGTAGAAG 58.997 45.455 0.00 0.00 0.00 2.85
627 630 3.262420 GCCAAAGAGAATGCGTAGAAGA 58.738 45.455 0.00 0.00 0.00 2.87
628 631 3.684788 GCCAAAGAGAATGCGTAGAAGAA 59.315 43.478 0.00 0.00 0.00 2.52
629 632 4.333926 GCCAAAGAGAATGCGTAGAAGAAT 59.666 41.667 0.00 0.00 0.00 2.40
630 633 5.728898 GCCAAAGAGAATGCGTAGAAGAATG 60.729 44.000 0.00 0.00 0.00 2.67
631 634 5.261661 CAAAGAGAATGCGTAGAAGAATGC 58.738 41.667 0.00 0.00 0.00 3.56
632 635 4.128925 AGAGAATGCGTAGAAGAATGCA 57.871 40.909 0.00 0.00 45.01 3.96
633 636 4.118410 AGAGAATGCGTAGAAGAATGCAG 58.882 43.478 0.00 0.00 44.19 4.41
634 637 4.115516 GAGAATGCGTAGAAGAATGCAGA 58.884 43.478 0.00 0.00 44.19 4.26
635 638 4.507710 AGAATGCGTAGAAGAATGCAGAA 58.492 39.130 0.00 0.00 44.19 3.02
636 639 4.331168 AGAATGCGTAGAAGAATGCAGAAC 59.669 41.667 0.00 0.00 44.19 3.01
637 640 3.319137 TGCGTAGAAGAATGCAGAACT 57.681 42.857 0.00 0.00 36.48 3.01
638 641 2.995939 TGCGTAGAAGAATGCAGAACTG 59.004 45.455 0.00 0.00 36.48 3.16
639 642 2.349886 GCGTAGAAGAATGCAGAACTGG 59.650 50.000 3.99 0.00 0.00 4.00
640 643 2.932614 CGTAGAAGAATGCAGAACTGGG 59.067 50.000 3.99 0.00 0.00 4.45
641 644 3.617531 CGTAGAAGAATGCAGAACTGGGT 60.618 47.826 3.99 0.00 0.00 4.51
642 645 2.787994 AGAAGAATGCAGAACTGGGTG 58.212 47.619 3.99 0.00 0.00 4.61
643 646 1.200948 GAAGAATGCAGAACTGGGTGC 59.799 52.381 3.99 0.00 40.29 5.01
646 649 4.162592 TGCAGAACTGGGTGCAAG 57.837 55.556 3.99 0.00 46.53 4.01
647 650 1.531259 TGCAGAACTGGGTGCAAGA 59.469 52.632 3.99 0.00 46.53 3.02
648 651 0.111061 TGCAGAACTGGGTGCAAGAT 59.889 50.000 3.99 0.00 46.53 2.40
649 652 1.251251 GCAGAACTGGGTGCAAGATT 58.749 50.000 3.99 0.00 39.62 2.40
650 653 1.615392 GCAGAACTGGGTGCAAGATTT 59.385 47.619 3.99 0.00 39.62 2.17
651 654 2.036346 GCAGAACTGGGTGCAAGATTTT 59.964 45.455 3.99 0.00 39.62 1.82
652 655 3.858503 GCAGAACTGGGTGCAAGATTTTC 60.859 47.826 3.99 0.00 39.62 2.29
653 656 2.893489 AGAACTGGGTGCAAGATTTTCC 59.107 45.455 0.00 0.00 0.00 3.13
654 657 2.380064 ACTGGGTGCAAGATTTTCCA 57.620 45.000 0.00 0.00 0.00 3.53
655 658 2.893424 ACTGGGTGCAAGATTTTCCAT 58.107 42.857 0.00 0.00 0.00 3.41
656 659 4.046286 ACTGGGTGCAAGATTTTCCATA 57.954 40.909 0.00 0.00 0.00 2.74
657 660 4.613437 ACTGGGTGCAAGATTTTCCATAT 58.387 39.130 0.00 0.00 0.00 1.78
658 661 4.646492 ACTGGGTGCAAGATTTTCCATATC 59.354 41.667 0.00 0.00 0.00 1.63
659 662 4.608269 TGGGTGCAAGATTTTCCATATCA 58.392 39.130 0.00 0.00 0.00 2.15
660 663 4.402155 TGGGTGCAAGATTTTCCATATCAC 59.598 41.667 0.00 0.00 0.00 3.06
661 664 4.202151 GGGTGCAAGATTTTCCATATCACC 60.202 45.833 0.00 0.00 40.33 4.02
662 665 4.402155 GGTGCAAGATTTTCCATATCACCA 59.598 41.667 0.00 0.00 40.65 4.17
663 666 5.343249 GTGCAAGATTTTCCATATCACCAC 58.657 41.667 0.00 0.00 0.00 4.16
664 667 4.096231 TGCAAGATTTTCCATATCACCACG 59.904 41.667 0.00 0.00 0.00 4.94
665 668 4.096382 GCAAGATTTTCCATATCACCACGT 59.904 41.667 0.00 0.00 0.00 4.49
666 669 5.572211 CAAGATTTTCCATATCACCACGTG 58.428 41.667 9.08 9.08 34.45 4.49
667 670 4.843728 AGATTTTCCATATCACCACGTGT 58.156 39.130 15.65 0.00 34.79 4.49
668 671 5.253330 AGATTTTCCATATCACCACGTGTT 58.747 37.500 15.65 0.00 34.79 3.32
669 672 6.411376 AGATTTTCCATATCACCACGTGTTA 58.589 36.000 15.65 0.00 34.79 2.41
670 673 5.866335 TTTTCCATATCACCACGTGTTAC 57.134 39.130 15.65 0.00 34.79 2.50
671 674 4.811969 TTCCATATCACCACGTGTTACT 57.188 40.909 15.65 0.00 34.79 2.24
672 675 4.811969 TCCATATCACCACGTGTTACTT 57.188 40.909 15.65 0.00 34.79 2.24
673 676 4.500127 TCCATATCACCACGTGTTACTTG 58.500 43.478 15.65 4.88 34.79 3.16
674 677 4.020928 TCCATATCACCACGTGTTACTTGT 60.021 41.667 15.65 0.42 34.79 3.16
675 678 4.328983 CCATATCACCACGTGTTACTTGTC 59.671 45.833 15.65 0.00 34.79 3.18
676 679 2.228138 TCACCACGTGTTACTTGTCC 57.772 50.000 15.65 0.00 34.79 4.02
677 680 0.856641 CACCACGTGTTACTTGTCCG 59.143 55.000 15.65 0.00 0.00 4.79
678 681 0.746063 ACCACGTGTTACTTGTCCGA 59.254 50.000 15.65 0.00 0.00 4.55
679 682 1.269413 ACCACGTGTTACTTGTCCGAG 60.269 52.381 15.65 0.00 0.00 4.63
680 683 1.415374 CACGTGTTACTTGTCCGAGG 58.585 55.000 7.58 0.00 0.00 4.63
681 684 0.319297 ACGTGTTACTTGTCCGAGGC 60.319 55.000 0.00 0.00 0.00 4.70
682 685 0.319211 CGTGTTACTTGTCCGAGGCA 60.319 55.000 0.00 0.00 0.00 4.75
683 686 1.429463 GTGTTACTTGTCCGAGGCAG 58.571 55.000 0.00 0.00 0.00 4.85
684 687 1.000506 GTGTTACTTGTCCGAGGCAGA 59.999 52.381 0.00 0.00 0.00 4.26
685 688 1.689813 TGTTACTTGTCCGAGGCAGAA 59.310 47.619 0.00 0.00 0.00 3.02
686 689 2.103432 TGTTACTTGTCCGAGGCAGAAA 59.897 45.455 0.00 0.00 0.00 2.52
687 690 3.244422 TGTTACTTGTCCGAGGCAGAAAT 60.244 43.478 0.00 0.00 0.00 2.17
688 691 4.020928 TGTTACTTGTCCGAGGCAGAAATA 60.021 41.667 0.00 0.00 0.00 1.40
689 692 3.695830 ACTTGTCCGAGGCAGAAATAA 57.304 42.857 0.00 0.00 0.00 1.40
690 693 3.335579 ACTTGTCCGAGGCAGAAATAAC 58.664 45.455 0.00 0.00 0.00 1.89
691 694 3.244422 ACTTGTCCGAGGCAGAAATAACA 60.244 43.478 0.00 0.00 0.00 2.41
692 695 3.410631 TGTCCGAGGCAGAAATAACAA 57.589 42.857 0.00 0.00 0.00 2.83
693 696 3.950397 TGTCCGAGGCAGAAATAACAAT 58.050 40.909 0.00 0.00 0.00 2.71
694 697 3.689161 TGTCCGAGGCAGAAATAACAATG 59.311 43.478 0.00 0.00 0.00 2.82
695 698 3.938963 GTCCGAGGCAGAAATAACAATGA 59.061 43.478 0.00 0.00 0.00 2.57
696 699 3.938963 TCCGAGGCAGAAATAACAATGAC 59.061 43.478 0.00 0.00 0.00 3.06
697 700 3.689161 CCGAGGCAGAAATAACAATGACA 59.311 43.478 0.00 0.00 0.00 3.58
698 701 4.201851 CCGAGGCAGAAATAACAATGACAG 60.202 45.833 0.00 0.00 0.00 3.51
699 702 4.201851 CGAGGCAGAAATAACAATGACAGG 60.202 45.833 0.00 0.00 0.00 4.00
700 703 4.666512 AGGCAGAAATAACAATGACAGGT 58.333 39.130 0.00 0.00 0.00 4.00
701 704 4.702131 AGGCAGAAATAACAATGACAGGTC 59.298 41.667 0.00 0.00 0.00 3.85
702 705 4.142381 GGCAGAAATAACAATGACAGGTCC 60.142 45.833 0.00 0.00 0.00 4.46
703 706 4.702131 GCAGAAATAACAATGACAGGTCCT 59.298 41.667 0.00 0.00 0.00 3.85
704 707 5.880332 GCAGAAATAACAATGACAGGTCCTA 59.120 40.000 0.00 0.00 0.00 2.94
705 708 6.543831 GCAGAAATAACAATGACAGGTCCTAT 59.456 38.462 0.00 0.00 0.00 2.57
706 709 7.467811 GCAGAAATAACAATGACAGGTCCTATG 60.468 40.741 0.00 0.00 0.00 2.23
707 710 7.770433 CAGAAATAACAATGACAGGTCCTATGA 59.230 37.037 0.00 0.00 0.00 2.15
708 711 7.770897 AGAAATAACAATGACAGGTCCTATGAC 59.229 37.037 0.00 0.00 40.98 3.06
709 712 4.908601 AACAATGACAGGTCCTATGACA 57.091 40.909 0.00 0.00 43.65 3.58
710 713 4.908601 ACAATGACAGGTCCTATGACAA 57.091 40.909 0.00 0.00 43.65 3.18
711 714 5.441718 ACAATGACAGGTCCTATGACAAT 57.558 39.130 0.00 0.00 43.65 2.71
712 715 5.188434 ACAATGACAGGTCCTATGACAATG 58.812 41.667 0.00 1.57 43.65 2.82
713 716 3.912496 TGACAGGTCCTATGACAATGG 57.088 47.619 0.00 0.00 43.65 3.16
714 717 2.092968 TGACAGGTCCTATGACAATGGC 60.093 50.000 0.00 1.68 43.65 4.40
715 718 1.915489 ACAGGTCCTATGACAATGGCA 59.085 47.619 0.00 0.00 43.65 4.92
716 719 2.092753 ACAGGTCCTATGACAATGGCAG 60.093 50.000 0.00 0.00 43.65 4.85
717 720 1.492176 AGGTCCTATGACAATGGCAGG 59.508 52.381 0.00 0.00 43.65 4.85
718 721 1.212935 GGTCCTATGACAATGGCAGGT 59.787 52.381 0.00 0.00 43.65 4.00
719 722 2.565841 GTCCTATGACAATGGCAGGTC 58.434 52.381 13.43 13.43 41.37 3.85
720 723 1.490490 TCCTATGACAATGGCAGGTCC 59.510 52.381 16.52 3.24 33.09 4.46
721 724 1.492176 CCTATGACAATGGCAGGTCCT 59.508 52.381 16.52 10.95 35.26 3.85
722 725 2.705658 CCTATGACAATGGCAGGTCCTA 59.294 50.000 16.52 11.40 35.26 2.94
723 726 3.328931 CCTATGACAATGGCAGGTCCTAT 59.671 47.826 16.52 8.98 35.26 2.57
724 727 4.532126 CCTATGACAATGGCAGGTCCTATA 59.468 45.833 16.52 9.50 35.26 1.31
725 728 5.190528 CCTATGACAATGGCAGGTCCTATAT 59.809 44.000 16.52 8.15 35.26 0.86
726 729 6.384015 CCTATGACAATGGCAGGTCCTATATA 59.616 42.308 16.52 8.71 35.26 0.86
727 730 6.898171 ATGACAATGGCAGGTCCTATATAT 57.102 37.500 16.52 0.00 35.26 0.86
728 731 7.995052 ATGACAATGGCAGGTCCTATATATA 57.005 36.000 16.52 0.00 35.26 0.86
729 732 7.995052 TGACAATGGCAGGTCCTATATATAT 57.005 36.000 16.52 0.00 35.26 0.86
730 733 9.674705 ATGACAATGGCAGGTCCTATATATATA 57.325 33.333 16.52 2.49 35.26 0.86
731 734 9.674705 TGACAATGGCAGGTCCTATATATATAT 57.325 33.333 16.52 10.10 35.26 0.86
844 847 2.138320 CAGGATGCCTAGCACATTACG 58.862 52.381 0.00 0.00 43.04 3.18
848 851 3.554960 GGATGCCTAGCACATTACGATGA 60.555 47.826 0.00 0.00 43.04 2.92
852 855 4.119862 GCCTAGCACATTACGATGAAAGA 58.880 43.478 0.00 0.00 36.73 2.52
945 949 5.303971 CATCCTGATCACTGGGAATTCTAC 58.696 45.833 6.29 0.00 36.08 2.59
946 950 4.361783 TCCTGATCACTGGGAATTCTACA 58.638 43.478 5.23 4.45 36.08 2.74
947 951 4.971282 TCCTGATCACTGGGAATTCTACAT 59.029 41.667 5.23 0.00 36.08 2.29
948 952 5.429762 TCCTGATCACTGGGAATTCTACATT 59.570 40.000 5.23 0.00 36.08 2.71
949 953 6.069440 TCCTGATCACTGGGAATTCTACATTT 60.069 38.462 5.23 0.00 36.08 2.32
950 954 6.261826 CCTGATCACTGGGAATTCTACATTTC 59.738 42.308 5.23 0.00 0.00 2.17
951 955 6.720309 TGATCACTGGGAATTCTACATTTCA 58.280 36.000 5.23 0.00 0.00 2.69
952 956 7.348815 TGATCACTGGGAATTCTACATTTCAT 58.651 34.615 5.23 0.00 0.00 2.57
953 957 8.493607 TGATCACTGGGAATTCTACATTTCATA 58.506 33.333 5.23 0.00 0.00 2.15
954 958 8.682936 ATCACTGGGAATTCTACATTTCATAC 57.317 34.615 5.23 0.00 0.00 2.39
955 959 7.629157 TCACTGGGAATTCTACATTTCATACA 58.371 34.615 5.23 0.00 0.00 2.29
956 960 7.552687 TCACTGGGAATTCTACATTTCATACAC 59.447 37.037 5.23 0.00 0.00 2.90
957 961 6.538742 ACTGGGAATTCTACATTTCATACACG 59.461 38.462 5.23 0.00 0.00 4.49
958 962 6.411376 TGGGAATTCTACATTTCATACACGT 58.589 36.000 5.23 0.00 0.00 4.49
959 963 6.315144 TGGGAATTCTACATTTCATACACGTG 59.685 38.462 15.48 15.48 0.00 4.49
960 964 6.537301 GGGAATTCTACATTTCATACACGTGA 59.463 38.462 25.01 6.34 0.00 4.35
961 965 7.065324 GGGAATTCTACATTTCATACACGTGAA 59.935 37.037 25.01 5.73 36.38 3.18
969 973 2.683968 TCATACACGTGAAACCTGAGC 58.316 47.619 25.01 0.00 0.00 4.26
970 974 1.732259 CATACACGTGAAACCTGAGCC 59.268 52.381 25.01 0.00 0.00 4.70
971 975 0.034337 TACACGTGAAACCTGAGCCC 59.966 55.000 25.01 0.00 0.00 5.19
1031 1035 0.106519 ACACAAGCTGGTGCCTCTTT 60.107 50.000 21.62 0.00 42.55 2.52
1050 1054 2.581354 CGCCTCCTTCAGTCTGGG 59.419 66.667 0.00 0.00 0.00 4.45
1075 1079 0.684479 TCACCAGTCCATCCTCCTCG 60.684 60.000 0.00 0.00 0.00 4.63
1201 1208 1.228657 GCGTCCTTCCACTGAACCAC 61.229 60.000 0.00 0.00 0.00 4.16
1207 1230 0.598158 TTCCACTGAACCACGTACGC 60.598 55.000 16.72 0.00 0.00 4.42
1222 1245 2.269172 GTACGCCTTCTTCTGGTAAGC 58.731 52.381 0.00 0.00 0.00 3.09
1239 1262 2.409948 AGCAGTTTGAGTCCATAGCC 57.590 50.000 0.00 0.00 0.00 3.93
1244 1267 1.745653 GTTTGAGTCCATAGCCTTGCC 59.254 52.381 0.00 0.00 0.00 4.52
1245 1268 0.107703 TTGAGTCCATAGCCTTGCCG 60.108 55.000 0.00 0.00 0.00 5.69
1247 1270 1.972660 GAGTCCATAGCCTTGCCGGT 61.973 60.000 1.90 0.00 34.25 5.28
1248 1271 1.077716 GTCCATAGCCTTGCCGGTT 60.078 57.895 1.90 0.00 34.25 4.44
1249 1272 0.179468 GTCCATAGCCTTGCCGGTTA 59.821 55.000 1.90 0.00 32.63 2.85
1251 1274 0.180406 CCATAGCCTTGCCGGTTAGT 59.820 55.000 1.90 0.00 31.51 2.24
1252 1275 1.408266 CCATAGCCTTGCCGGTTAGTT 60.408 52.381 1.90 0.00 31.51 2.24
1255 1278 0.179001 AGCCTTGCCGGTTAGTTGTT 60.179 50.000 1.90 0.00 34.25 2.83
1258 1526 2.482316 GCCTTGCCGGTTAGTTGTTTTT 60.482 45.455 1.90 0.00 34.25 1.94
1285 1599 1.061546 TGGAAGGGGTACACTGGTTC 58.938 55.000 0.00 0.00 0.00 3.62
1288 1602 1.278413 GAAGGGGTACACTGGTTCCTC 59.722 57.143 0.00 0.00 35.28 3.71
1307 1717 8.537858 GGTTCCTCCTAAAATGTAACTCTTCTA 58.462 37.037 0.00 0.00 0.00 2.10
1343 1753 4.980339 AAAAATGCCTCCAATTTGGACT 57.020 36.364 14.24 0.00 42.67 3.85
1353 1766 4.398319 TCCAATTTGGACTCTCTCAAACC 58.602 43.478 14.24 0.00 42.67 3.27
1490 1936 3.460857 ACATCGCTCTCATAACCCTTC 57.539 47.619 0.00 0.00 0.00 3.46
1898 2389 9.988350 ATTTAATACTCGTATTTTCACTTGCTG 57.012 29.630 7.53 0.00 37.07 4.41
1957 2448 6.882140 TCGCAGGACTAGAATTTATTGGAAAA 59.118 34.615 0.00 0.00 0.00 2.29
2169 2969 9.103861 TGACAATTAGTATCATAATGTGCGAAA 57.896 29.630 0.00 0.00 0.00 3.46
2696 4148 5.938125 AGGCATACATGTAATAATCCGAACC 59.062 40.000 10.14 0.23 0.00 3.62
3685 5191 4.871993 AAATTGTTATCTCTCTGCTGCG 57.128 40.909 0.00 0.00 0.00 5.18
3721 5227 0.598562 ACGAACTCTCTGATGCACGT 59.401 50.000 0.00 0.00 0.00 4.49
4125 5652 6.283694 TGTCCTGAGATACATTACATTGAGC 58.716 40.000 0.00 0.00 0.00 4.26
5111 6668 2.269940 AGGTAGCTGGAGGTGATGTTT 58.730 47.619 0.00 0.00 0.00 2.83
5202 6759 3.173953 TCAATCAAAGATGGGCTTGGT 57.826 42.857 0.00 0.00 36.80 3.67
5247 6805 3.998522 TGAAAAAGTAGCGCGCTATTTC 58.001 40.909 36.01 36.01 31.17 2.17
5260 6818 2.056577 GCTATTTCGGCGTTATAGCGT 58.943 47.619 26.76 5.37 37.91 5.07
5327 6954 1.691196 GCTACAATGCTAATGGCCCA 58.309 50.000 0.00 0.00 40.92 5.36
5453 7080 2.158623 AGTGGGTCATCACATGTGTTGT 60.159 45.455 27.75 13.86 39.93 3.32
5477 7104 7.387673 TGTGTTAGAAGTGTCACAAATATCAGG 59.612 37.037 5.62 0.00 37.77 3.86
5558 7444 3.823873 AGACATCAACCGGTATGCAAAAA 59.176 39.130 8.00 0.00 0.00 1.94
5594 7480 2.227757 TGGATCGAGGCCCACCAAA 61.228 57.895 0.00 0.00 39.06 3.28
5595 7481 1.749258 GGATCGAGGCCCACCAAAC 60.749 63.158 0.00 0.00 39.06 2.93
5596 7482 1.002624 GATCGAGGCCCACCAAACA 60.003 57.895 0.00 0.00 39.06 2.83
5669 7556 1.208535 CTTATGCTTCGGTACACCCCA 59.791 52.381 0.00 0.00 0.00 4.96
5676 7563 3.677190 CTTCGGTACACCCCATAAACAA 58.323 45.455 0.00 0.00 0.00 2.83
5725 7612 4.972568 TCCTTTGTAGGTTAGGGCATGATA 59.027 41.667 0.00 0.00 42.60 2.15
5824 7784 2.502093 CAGTGGCCGCCCGTATTA 59.498 61.111 14.07 0.00 0.00 0.98
5838 7798 4.261447 GCCCGTATTATTCCCAAACATGTC 60.261 45.833 0.00 0.00 0.00 3.06
5871 7831 5.642919 CCAGAGATTCTTTTTGAGAGGACAG 59.357 44.000 0.00 0.00 35.37 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.470437 GGTATTGCTTTAGCTGGGAGTAATC 59.530 44.000 0.00 0.00 42.66 1.75
1 2 5.104109 TGGTATTGCTTTAGCTGGGAGTAAT 60.104 40.000 0.00 5.52 42.66 1.89
2 3 4.226394 TGGTATTGCTTTAGCTGGGAGTAA 59.774 41.667 0.00 0.00 42.66 2.24
3 4 3.778075 TGGTATTGCTTTAGCTGGGAGTA 59.222 43.478 0.00 0.00 42.66 2.59
4 5 2.576191 TGGTATTGCTTTAGCTGGGAGT 59.424 45.455 0.00 0.00 42.66 3.85
5 6 3.281727 TGGTATTGCTTTAGCTGGGAG 57.718 47.619 0.00 0.00 42.66 4.30
6 7 3.459598 AGATGGTATTGCTTTAGCTGGGA 59.540 43.478 0.00 0.00 42.66 4.37
7 8 3.825328 AGATGGTATTGCTTTAGCTGGG 58.175 45.455 0.00 0.00 42.66 4.45
9 10 5.303971 AGCTAGATGGTATTGCTTTAGCTG 58.696 41.667 0.00 0.00 40.40 4.24
10 11 5.559148 AGCTAGATGGTATTGCTTTAGCT 57.441 39.130 3.10 0.00 42.66 3.32
11 12 5.529060 ACAAGCTAGATGGTATTGCTTTAGC 59.471 40.000 0.00 0.00 41.31 3.09
12 13 6.074088 CGACAAGCTAGATGGTATTGCTTTAG 60.074 42.308 0.00 0.00 41.31 1.85
14 15 4.572389 CGACAAGCTAGATGGTATTGCTTT 59.428 41.667 0.00 0.00 41.31 3.51
15 16 4.122776 CGACAAGCTAGATGGTATTGCTT 58.877 43.478 0.00 0.00 43.61 3.91
16 17 3.493350 CCGACAAGCTAGATGGTATTGCT 60.493 47.826 0.00 0.00 35.30 3.91
17 18 2.802816 CCGACAAGCTAGATGGTATTGC 59.197 50.000 0.00 0.00 0.00 3.56
19 20 3.039011 ACCCGACAAGCTAGATGGTATT 58.961 45.455 0.00 0.00 0.00 1.89
20 21 2.365617 CACCCGACAAGCTAGATGGTAT 59.634 50.000 0.00 0.00 0.00 2.73
21 22 1.754803 CACCCGACAAGCTAGATGGTA 59.245 52.381 0.00 0.00 0.00 3.25
22 23 0.537188 CACCCGACAAGCTAGATGGT 59.463 55.000 0.00 0.00 0.00 3.55
23 24 0.811616 GCACCCGACAAGCTAGATGG 60.812 60.000 0.00 0.00 0.00 3.51
24 25 0.176680 AGCACCCGACAAGCTAGATG 59.823 55.000 0.00 0.00 36.73 2.90
25 26 0.176680 CAGCACCCGACAAGCTAGAT 59.823 55.000 0.00 0.00 36.73 1.98
26 27 1.591703 CAGCACCCGACAAGCTAGA 59.408 57.895 0.00 0.00 36.73 2.43
27 28 1.448540 CCAGCACCCGACAAGCTAG 60.449 63.158 0.00 0.00 36.73 3.42
28 29 2.662596 CCAGCACCCGACAAGCTA 59.337 61.111 0.00 0.00 36.73 3.32
31 32 3.052082 CAGCCAGCACCCGACAAG 61.052 66.667 0.00 0.00 0.00 3.16
32 33 4.641645 CCAGCCAGCACCCGACAA 62.642 66.667 0.00 0.00 0.00 3.18
34 35 4.329545 TTCCAGCCAGCACCCGAC 62.330 66.667 0.00 0.00 0.00 4.79
35 36 4.020617 CTTCCAGCCAGCACCCGA 62.021 66.667 0.00 0.00 0.00 5.14
37 38 4.748144 CCCTTCCAGCCAGCACCC 62.748 72.222 0.00 0.00 0.00 4.61
45 46 2.045536 CACCTCAGCCCTTCCAGC 60.046 66.667 0.00 0.00 0.00 4.85
68 71 2.715749 TGATGCGGAGGATGAAACAT 57.284 45.000 0.00 0.00 40.04 2.71
87 90 1.821061 CGCCTAGATCCGCCATCCTT 61.821 60.000 0.00 0.00 30.71 3.36
89 92 2.262915 CGCCTAGATCCGCCATCC 59.737 66.667 0.00 0.00 30.71 3.51
107 110 4.357947 GAGTCCACTGCGCCACGA 62.358 66.667 4.18 0.00 0.00 4.35
114 117 1.227853 AACAACCCGAGTCCACTGC 60.228 57.895 0.00 0.00 0.00 4.40
122 125 0.802494 CCCAAATCGAACAACCCGAG 59.198 55.000 0.00 0.00 39.55 4.63
125 128 1.957877 TCAACCCAAATCGAACAACCC 59.042 47.619 0.00 0.00 0.00 4.11
126 129 3.574614 CATCAACCCAAATCGAACAACC 58.425 45.455 0.00 0.00 0.00 3.77
128 131 3.254657 GTCCATCAACCCAAATCGAACAA 59.745 43.478 0.00 0.00 0.00 2.83
129 132 2.817258 GTCCATCAACCCAAATCGAACA 59.183 45.455 0.00 0.00 0.00 3.18
132 135 2.676750 CGAGTCCATCAACCCAAATCGA 60.677 50.000 0.00 0.00 0.00 3.59
137 140 1.375396 CGCGAGTCCATCAACCCAA 60.375 57.895 0.00 0.00 0.00 4.12
138 141 2.264480 CGCGAGTCCATCAACCCA 59.736 61.111 0.00 0.00 0.00 4.51
145 148 2.107750 CCTCATGCGCGAGTCCAT 59.892 61.111 12.10 0.00 0.00 3.41
146 149 3.068064 TCCTCATGCGCGAGTCCA 61.068 61.111 12.10 0.00 0.00 4.02
158 161 1.890041 CCAAACAACGCCGTCCTCA 60.890 57.895 0.00 0.00 0.00 3.86
173 176 1.669760 GATTCCACCACGACGCCAA 60.670 57.895 0.00 0.00 0.00 4.52
188 191 1.046472 TCCCAGACATACCGCCGATT 61.046 55.000 0.00 0.00 0.00 3.34
189 192 1.046472 TTCCCAGACATACCGCCGAT 61.046 55.000 0.00 0.00 0.00 4.18
193 196 0.252197 AACCTTCCCAGACATACCGC 59.748 55.000 0.00 0.00 0.00 5.68
194 197 1.553248 TCAACCTTCCCAGACATACCG 59.447 52.381 0.00 0.00 0.00 4.02
195 198 3.545703 CATCAACCTTCCCAGACATACC 58.454 50.000 0.00 0.00 0.00 2.73
196 199 2.945668 GCATCAACCTTCCCAGACATAC 59.054 50.000 0.00 0.00 0.00 2.39
197 200 2.575735 TGCATCAACCTTCCCAGACATA 59.424 45.455 0.00 0.00 0.00 2.29
198 201 1.355381 TGCATCAACCTTCCCAGACAT 59.645 47.619 0.00 0.00 0.00 3.06
199 202 0.770499 TGCATCAACCTTCCCAGACA 59.230 50.000 0.00 0.00 0.00 3.41
200 203 2.019984 GATGCATCAACCTTCCCAGAC 58.980 52.381 21.92 0.00 0.00 3.51
201 204 1.407299 CGATGCATCAACCTTCCCAGA 60.407 52.381 25.70 0.00 0.00 3.86
202 205 1.019673 CGATGCATCAACCTTCCCAG 58.980 55.000 25.70 2.16 0.00 4.45
203 206 0.394216 CCGATGCATCAACCTTCCCA 60.394 55.000 25.70 0.00 0.00 4.37
204 207 0.394352 ACCGATGCATCAACCTTCCC 60.394 55.000 25.70 0.00 0.00 3.97
205 208 2.325583 TACCGATGCATCAACCTTCC 57.674 50.000 25.70 0.00 0.00 3.46
206 209 3.063997 CAGTTACCGATGCATCAACCTTC 59.936 47.826 25.70 11.15 0.00 3.46
207 210 3.009723 CAGTTACCGATGCATCAACCTT 58.990 45.455 25.70 6.01 0.00 3.50
208 211 2.632377 CAGTTACCGATGCATCAACCT 58.368 47.619 25.70 10.80 0.00 3.50
209 212 1.064060 GCAGTTACCGATGCATCAACC 59.936 52.381 25.70 8.79 42.11 3.77
210 213 2.009774 AGCAGTTACCGATGCATCAAC 58.990 47.619 25.70 20.69 45.01 3.18
211 214 2.093500 AGAGCAGTTACCGATGCATCAA 60.093 45.455 25.70 10.45 45.01 2.57
212 215 1.482182 AGAGCAGTTACCGATGCATCA 59.518 47.619 25.70 4.21 45.01 3.07
213 216 1.863454 CAGAGCAGTTACCGATGCATC 59.137 52.381 17.10 17.10 45.01 3.91
214 217 1.482182 TCAGAGCAGTTACCGATGCAT 59.518 47.619 0.00 0.00 45.01 3.96
215 218 0.894835 TCAGAGCAGTTACCGATGCA 59.105 50.000 0.00 0.00 45.01 3.96
216 219 1.929836 CTTCAGAGCAGTTACCGATGC 59.070 52.381 0.00 0.00 42.87 3.91
217 220 2.093973 ACCTTCAGAGCAGTTACCGATG 60.094 50.000 0.00 0.00 0.00 3.84
218 221 2.180276 ACCTTCAGAGCAGTTACCGAT 58.820 47.619 0.00 0.00 0.00 4.18
219 222 1.629043 ACCTTCAGAGCAGTTACCGA 58.371 50.000 0.00 0.00 0.00 4.69
220 223 2.753452 TCTACCTTCAGAGCAGTTACCG 59.247 50.000 0.00 0.00 0.00 4.02
221 224 4.498345 CGATCTACCTTCAGAGCAGTTACC 60.498 50.000 0.00 0.00 30.18 2.85
222 225 4.335874 TCGATCTACCTTCAGAGCAGTTAC 59.664 45.833 0.00 0.00 30.18 2.50
223 226 4.524053 TCGATCTACCTTCAGAGCAGTTA 58.476 43.478 0.00 0.00 30.18 2.24
224 227 3.357203 TCGATCTACCTTCAGAGCAGTT 58.643 45.455 0.00 0.00 30.18 3.16
225 228 3.006112 TCGATCTACCTTCAGAGCAGT 57.994 47.619 0.00 0.00 30.18 4.40
226 229 3.305267 CCATCGATCTACCTTCAGAGCAG 60.305 52.174 0.00 0.00 30.18 4.24
227 230 2.625314 CCATCGATCTACCTTCAGAGCA 59.375 50.000 0.00 0.00 30.18 4.26
228 231 2.887783 TCCATCGATCTACCTTCAGAGC 59.112 50.000 0.00 0.00 0.00 4.09
229 232 4.824537 TCTTCCATCGATCTACCTTCAGAG 59.175 45.833 0.00 0.00 0.00 3.35
230 233 4.793201 TCTTCCATCGATCTACCTTCAGA 58.207 43.478 0.00 0.00 0.00 3.27
231 234 5.468592 CATCTTCCATCGATCTACCTTCAG 58.531 45.833 0.00 0.00 0.00 3.02
232 235 4.281941 CCATCTTCCATCGATCTACCTTCA 59.718 45.833 0.00 0.00 0.00 3.02
233 236 4.815269 CCATCTTCCATCGATCTACCTTC 58.185 47.826 0.00 0.00 0.00 3.46
234 237 3.007398 GCCATCTTCCATCGATCTACCTT 59.993 47.826 0.00 0.00 0.00 3.50
235 238 2.564947 GCCATCTTCCATCGATCTACCT 59.435 50.000 0.00 0.00 0.00 3.08
236 239 2.300152 TGCCATCTTCCATCGATCTACC 59.700 50.000 0.00 0.00 0.00 3.18
237 240 3.321497 GTGCCATCTTCCATCGATCTAC 58.679 50.000 0.00 0.00 0.00 2.59
238 241 2.300152 GGTGCCATCTTCCATCGATCTA 59.700 50.000 0.00 0.00 0.00 1.98
239 242 1.071385 GGTGCCATCTTCCATCGATCT 59.929 52.381 0.00 0.00 0.00 2.75
240 243 1.517242 GGTGCCATCTTCCATCGATC 58.483 55.000 0.00 0.00 0.00 3.69
241 244 0.250038 CGGTGCCATCTTCCATCGAT 60.250 55.000 0.00 0.00 37.76 3.59
242 245 1.143838 CGGTGCCATCTTCCATCGA 59.856 57.895 0.00 0.00 37.76 3.59
243 246 1.889105 CCGGTGCCATCTTCCATCG 60.889 63.158 0.00 0.00 35.47 3.84
244 247 2.189499 GCCGGTGCCATCTTCCATC 61.189 63.158 1.90 0.00 0.00 3.51
245 248 2.124151 GCCGGTGCCATCTTCCAT 60.124 61.111 1.90 0.00 0.00 3.41
246 249 3.626996 CTGCCGGTGCCATCTTCCA 62.627 63.158 1.90 0.00 36.33 3.53
247 250 2.825836 CTGCCGGTGCCATCTTCC 60.826 66.667 1.90 0.00 36.33 3.46
248 251 2.045926 ACTGCCGGTGCCATCTTC 60.046 61.111 1.90 0.00 36.33 2.87
249 252 2.045926 GACTGCCGGTGCCATCTT 60.046 61.111 1.90 0.00 36.33 2.40
250 253 4.101448 GGACTGCCGGTGCCATCT 62.101 66.667 1.90 0.00 36.33 2.90
263 266 0.764369 TTGGCACACTCTCAGGGACT 60.764 55.000 0.00 0.00 39.29 3.85
264 267 0.108585 TTTGGCACACTCTCAGGGAC 59.891 55.000 0.00 0.00 39.29 4.46
265 268 0.108585 GTTTGGCACACTCTCAGGGA 59.891 55.000 0.00 0.00 39.29 4.20
266 269 0.890996 GGTTTGGCACACTCTCAGGG 60.891 60.000 3.51 0.00 39.29 4.45
267 270 1.230635 CGGTTTGGCACACTCTCAGG 61.231 60.000 3.51 0.00 39.29 3.86
268 271 1.230635 CCGGTTTGGCACACTCTCAG 61.231 60.000 3.51 0.00 39.29 3.35
269 272 1.227823 CCGGTTTGGCACACTCTCA 60.228 57.895 3.51 0.00 39.29 3.27
270 273 1.227853 ACCGGTTTGGCACACTCTC 60.228 57.895 0.00 0.00 43.94 3.20
271 274 1.227853 GACCGGTTTGGCACACTCT 60.228 57.895 9.42 0.00 43.94 3.24
272 275 1.227853 AGACCGGTTTGGCACACTC 60.228 57.895 9.42 0.00 43.94 3.51
273 276 1.525995 CAGACCGGTTTGGCACACT 60.526 57.895 17.22 0.00 43.94 3.55
274 277 1.822186 ACAGACCGGTTTGGCACAC 60.822 57.895 27.09 3.74 43.94 3.82
275 278 1.821759 CACAGACCGGTTTGGCACA 60.822 57.895 27.09 0.00 43.94 4.57
276 279 3.030652 CACAGACCGGTTTGGCAC 58.969 61.111 27.09 5.30 43.94 5.01
277 280 2.904866 GCACAGACCGGTTTGGCA 60.905 61.111 27.09 0.00 43.94 4.92
278 281 3.670377 GGCACAGACCGGTTTGGC 61.670 66.667 27.09 24.37 43.94 4.52
279 282 2.983592 GGGCACAGACCGGTTTGG 60.984 66.667 27.09 17.24 46.41 3.28
280 283 2.983592 GGGGCACAGACCGGTTTG 60.984 66.667 22.75 22.75 0.00 2.93
281 284 3.494254 TGGGGCACAGACCGGTTT 61.494 61.111 9.42 0.00 0.00 3.27
290 293 2.075355 ATTTTCGGGTCTGGGGCACA 62.075 55.000 0.00 0.00 0.00 4.57
291 294 1.304134 ATTTTCGGGTCTGGGGCAC 60.304 57.895 0.00 0.00 0.00 5.01
292 295 1.304052 CATTTTCGGGTCTGGGGCA 60.304 57.895 0.00 0.00 0.00 5.36
293 296 1.304134 ACATTTTCGGGTCTGGGGC 60.304 57.895 0.00 0.00 0.00 5.80
294 297 0.965363 CCACATTTTCGGGTCTGGGG 60.965 60.000 0.00 0.00 0.00 4.96
295 298 1.595093 GCCACATTTTCGGGTCTGGG 61.595 60.000 0.00 0.00 0.00 4.45
296 299 0.609131 AGCCACATTTTCGGGTCTGG 60.609 55.000 0.00 0.00 0.00 3.86
297 300 1.068333 CAAGCCACATTTTCGGGTCTG 60.068 52.381 0.00 0.00 31.11 3.51
298 301 1.247567 CAAGCCACATTTTCGGGTCT 58.752 50.000 0.00 0.00 31.11 3.85
299 302 0.243636 CCAAGCCACATTTTCGGGTC 59.756 55.000 0.00 0.00 31.11 4.46
300 303 0.469144 ACCAAGCCACATTTTCGGGT 60.469 50.000 0.00 0.00 33.45 5.28
301 304 0.678950 AACCAAGCCACATTTTCGGG 59.321 50.000 0.00 0.00 0.00 5.14
302 305 1.339610 TCAACCAAGCCACATTTTCGG 59.660 47.619 0.00 0.00 0.00 4.30
303 306 2.607771 CCTCAACCAAGCCACATTTTCG 60.608 50.000 0.00 0.00 0.00 3.46
304 307 2.867647 GCCTCAACCAAGCCACATTTTC 60.868 50.000 0.00 0.00 0.00 2.29
305 308 1.070601 GCCTCAACCAAGCCACATTTT 59.929 47.619 0.00 0.00 0.00 1.82
306 309 0.681175 GCCTCAACCAAGCCACATTT 59.319 50.000 0.00 0.00 0.00 2.32
307 310 1.187567 GGCCTCAACCAAGCCACATT 61.188 55.000 0.00 0.00 46.34 2.71
308 311 1.607467 GGCCTCAACCAAGCCACAT 60.607 57.895 0.00 0.00 46.34 3.21
309 312 2.203480 GGCCTCAACCAAGCCACA 60.203 61.111 0.00 0.00 46.34 4.17
313 316 2.747855 CGGAGGCCTCAACCAAGC 60.748 66.667 33.29 13.59 0.00 4.01
314 317 2.045926 CCGGAGGCCTCAACCAAG 60.046 66.667 33.29 16.00 46.14 3.61
326 329 4.138487 AGCCTAACATCTAAAACCGGAG 57.862 45.455 9.46 0.00 0.00 4.63
327 330 4.563140 AAGCCTAACATCTAAAACCGGA 57.437 40.909 9.46 0.00 0.00 5.14
328 331 4.142469 CCAAAGCCTAACATCTAAAACCGG 60.142 45.833 0.00 0.00 0.00 5.28
329 332 4.457949 ACCAAAGCCTAACATCTAAAACCG 59.542 41.667 0.00 0.00 0.00 4.44
330 333 5.709966 CACCAAAGCCTAACATCTAAAACC 58.290 41.667 0.00 0.00 0.00 3.27
331 334 5.161358 GCACCAAAGCCTAACATCTAAAAC 58.839 41.667 0.00 0.00 0.00 2.43
332 335 4.083003 CGCACCAAAGCCTAACATCTAAAA 60.083 41.667 0.00 0.00 0.00 1.52
333 336 3.438781 CGCACCAAAGCCTAACATCTAAA 59.561 43.478 0.00 0.00 0.00 1.85
334 337 3.006940 CGCACCAAAGCCTAACATCTAA 58.993 45.455 0.00 0.00 0.00 2.10
335 338 2.235155 TCGCACCAAAGCCTAACATCTA 59.765 45.455 0.00 0.00 0.00 1.98
336 339 1.003118 TCGCACCAAAGCCTAACATCT 59.997 47.619 0.00 0.00 0.00 2.90
337 340 1.448985 TCGCACCAAAGCCTAACATC 58.551 50.000 0.00 0.00 0.00 3.06
338 341 1.812571 CTTCGCACCAAAGCCTAACAT 59.187 47.619 0.00 0.00 0.00 2.71
339 342 1.234821 CTTCGCACCAAAGCCTAACA 58.765 50.000 0.00 0.00 0.00 2.41
340 343 1.235724 ACTTCGCACCAAAGCCTAAC 58.764 50.000 0.00 0.00 0.00 2.34
341 344 1.975660 AACTTCGCACCAAAGCCTAA 58.024 45.000 0.00 0.00 0.00 2.69
342 345 1.606668 CAAACTTCGCACCAAAGCCTA 59.393 47.619 0.00 0.00 0.00 3.93
343 346 0.385390 CAAACTTCGCACCAAAGCCT 59.615 50.000 0.00 0.00 0.00 4.58
344 347 0.597377 CCAAACTTCGCACCAAAGCC 60.597 55.000 0.00 0.00 0.00 4.35
345 348 0.102300 ACCAAACTTCGCACCAAAGC 59.898 50.000 0.00 0.00 0.00 3.51
346 349 2.192624 CAACCAAACTTCGCACCAAAG 58.807 47.619 0.00 0.00 0.00 2.77
347 350 1.134965 CCAACCAAACTTCGCACCAAA 60.135 47.619 0.00 0.00 0.00 3.28
348 351 0.457851 CCAACCAAACTTCGCACCAA 59.542 50.000 0.00 0.00 0.00 3.67
349 352 0.681564 ACCAACCAAACTTCGCACCA 60.682 50.000 0.00 0.00 0.00 4.17
350 353 1.310904 TACCAACCAAACTTCGCACC 58.689 50.000 0.00 0.00 0.00 5.01
351 354 3.252458 AGAATACCAACCAAACTTCGCAC 59.748 43.478 0.00 0.00 0.00 5.34
352 355 3.252215 CAGAATACCAACCAAACTTCGCA 59.748 43.478 0.00 0.00 0.00 5.10
353 356 3.821841 CAGAATACCAACCAAACTTCGC 58.178 45.455 0.00 0.00 0.00 4.70
354 357 3.502211 AGCAGAATACCAACCAAACTTCG 59.498 43.478 0.00 0.00 0.00 3.79
355 358 4.518970 TGAGCAGAATACCAACCAAACTTC 59.481 41.667 0.00 0.00 0.00 3.01
356 359 4.469657 TGAGCAGAATACCAACCAAACTT 58.530 39.130 0.00 0.00 0.00 2.66
357 360 4.074970 CTGAGCAGAATACCAACCAAACT 58.925 43.478 0.00 0.00 0.00 2.66
358 361 4.072131 TCTGAGCAGAATACCAACCAAAC 58.928 43.478 0.00 0.00 33.91 2.93
359 362 4.072131 GTCTGAGCAGAATACCAACCAAA 58.928 43.478 1.08 0.00 39.48 3.28
360 363 3.327757 AGTCTGAGCAGAATACCAACCAA 59.672 43.478 1.08 0.00 39.48 3.67
361 364 2.906389 AGTCTGAGCAGAATACCAACCA 59.094 45.455 1.08 0.00 39.48 3.67
362 365 3.618690 AGTCTGAGCAGAATACCAACC 57.381 47.619 1.08 0.00 39.48 3.77
363 366 6.451393 CCTATAGTCTGAGCAGAATACCAAC 58.549 44.000 9.51 0.00 40.25 3.77
364 367 5.011125 GCCTATAGTCTGAGCAGAATACCAA 59.989 44.000 9.51 0.00 40.25 3.67
365 368 4.524714 GCCTATAGTCTGAGCAGAATACCA 59.475 45.833 9.51 1.55 40.25 3.25
366 369 4.524714 TGCCTATAGTCTGAGCAGAATACC 59.475 45.833 9.51 1.40 40.25 2.73
367 370 5.465935 GTGCCTATAGTCTGAGCAGAATAC 58.534 45.833 9.51 0.00 40.25 1.89
368 371 4.524714 GGTGCCTATAGTCTGAGCAGAATA 59.475 45.833 9.70 9.70 41.44 1.75
369 372 3.323403 GGTGCCTATAGTCTGAGCAGAAT 59.677 47.826 5.73 5.73 39.48 2.40
370 373 2.695666 GGTGCCTATAGTCTGAGCAGAA 59.304 50.000 1.08 0.00 39.48 3.02
371 374 2.311463 GGTGCCTATAGTCTGAGCAGA 58.689 52.381 0.00 0.00 33.37 4.26
372 375 1.342819 GGGTGCCTATAGTCTGAGCAG 59.657 57.143 0.00 0.00 33.37 4.24
373 376 1.414158 GGGTGCCTATAGTCTGAGCA 58.586 55.000 0.00 0.00 0.00 4.26
374 377 0.682292 GGGGTGCCTATAGTCTGAGC 59.318 60.000 0.00 0.00 0.00 4.26
375 378 2.390225 AGGGGTGCCTATAGTCTGAG 57.610 55.000 0.00 0.00 0.00 3.35
376 379 2.023404 TGAAGGGGTGCCTATAGTCTGA 60.023 50.000 0.00 0.00 0.00 3.27
377 380 2.398588 TGAAGGGGTGCCTATAGTCTG 58.601 52.381 0.00 0.00 0.00 3.51
378 381 2.868964 TGAAGGGGTGCCTATAGTCT 57.131 50.000 0.00 0.00 0.00 3.24
379 382 2.972713 TGATGAAGGGGTGCCTATAGTC 59.027 50.000 0.00 0.00 0.00 2.59
380 383 2.975489 CTGATGAAGGGGTGCCTATAGT 59.025 50.000 0.00 0.00 0.00 2.12
381 384 2.975489 ACTGATGAAGGGGTGCCTATAG 59.025 50.000 0.00 0.00 0.00 1.31
382 385 3.060479 ACTGATGAAGGGGTGCCTATA 57.940 47.619 0.00 0.00 0.00 1.31
383 386 1.898863 ACTGATGAAGGGGTGCCTAT 58.101 50.000 0.00 0.00 0.00 2.57
384 387 1.281867 CAACTGATGAAGGGGTGCCTA 59.718 52.381 0.00 0.00 0.00 3.93
385 388 0.038744 CAACTGATGAAGGGGTGCCT 59.961 55.000 0.00 0.00 0.00 4.75
386 389 0.967380 CCAACTGATGAAGGGGTGCC 60.967 60.000 0.00 0.00 0.00 5.01
387 390 0.038166 TCCAACTGATGAAGGGGTGC 59.962 55.000 0.00 0.00 0.00 5.01
388 391 2.814805 ATCCAACTGATGAAGGGGTG 57.185 50.000 0.00 0.00 30.54 4.61
389 392 2.780010 CCTATCCAACTGATGAAGGGGT 59.220 50.000 0.00 0.00 34.76 4.95
390 393 3.048600 TCCTATCCAACTGATGAAGGGG 58.951 50.000 0.00 0.00 34.76 4.79
391 394 3.713764 ACTCCTATCCAACTGATGAAGGG 59.286 47.826 0.00 0.00 34.76 3.95
392 395 5.221541 GGTACTCCTATCCAACTGATGAAGG 60.222 48.000 0.00 0.00 34.76 3.46
393 396 5.508153 CGGTACTCCTATCCAACTGATGAAG 60.508 48.000 0.00 0.00 34.76 3.02
394 397 4.341235 CGGTACTCCTATCCAACTGATGAA 59.659 45.833 0.00 0.00 34.76 2.57
395 398 3.889538 CGGTACTCCTATCCAACTGATGA 59.110 47.826 0.00 0.00 34.76 2.92
396 399 3.889538 TCGGTACTCCTATCCAACTGATG 59.110 47.826 0.00 0.00 34.76 3.07
397 400 3.890147 GTCGGTACTCCTATCCAACTGAT 59.110 47.826 0.00 0.00 37.49 2.90
398 401 3.285484 GTCGGTACTCCTATCCAACTGA 58.715 50.000 0.00 0.00 0.00 3.41
399 402 3.021695 TGTCGGTACTCCTATCCAACTG 58.978 50.000 0.00 0.00 0.00 3.16
400 403 3.053842 TCTGTCGGTACTCCTATCCAACT 60.054 47.826 0.00 0.00 0.00 3.16
401 404 3.285484 TCTGTCGGTACTCCTATCCAAC 58.715 50.000 0.00 0.00 0.00 3.77
402 405 3.657398 TCTGTCGGTACTCCTATCCAA 57.343 47.619 0.00 0.00 0.00 3.53
403 406 3.053842 ACTTCTGTCGGTACTCCTATCCA 60.054 47.826 0.00 0.00 0.00 3.41
404 407 3.553904 ACTTCTGTCGGTACTCCTATCC 58.446 50.000 0.00 0.00 0.00 2.59
405 408 6.347563 CGATAACTTCTGTCGGTACTCCTATC 60.348 46.154 0.00 0.00 35.21 2.08
406 409 5.469421 CGATAACTTCTGTCGGTACTCCTAT 59.531 44.000 0.00 0.00 35.21 2.57
407 410 4.813161 CGATAACTTCTGTCGGTACTCCTA 59.187 45.833 0.00 0.00 35.21 2.94
408 411 3.626670 CGATAACTTCTGTCGGTACTCCT 59.373 47.826 0.00 0.00 35.21 3.69
409 412 3.624861 TCGATAACTTCTGTCGGTACTCC 59.375 47.826 0.00 0.00 39.02 3.85
410 413 4.569966 TCTCGATAACTTCTGTCGGTACTC 59.430 45.833 0.00 0.00 39.02 2.59
411 414 4.332268 GTCTCGATAACTTCTGTCGGTACT 59.668 45.833 0.00 0.00 39.02 2.73
412 415 4.093998 TGTCTCGATAACTTCTGTCGGTAC 59.906 45.833 0.00 0.00 39.02 3.34
413 416 4.256110 TGTCTCGATAACTTCTGTCGGTA 58.744 43.478 0.00 0.00 39.02 4.02
414 417 3.079578 TGTCTCGATAACTTCTGTCGGT 58.920 45.455 0.00 0.00 39.02 4.69
415 418 3.127203 ACTGTCTCGATAACTTCTGTCGG 59.873 47.826 0.00 0.00 39.02 4.79
416 419 4.092120 CACTGTCTCGATAACTTCTGTCG 58.908 47.826 0.00 0.00 39.82 4.35
417 420 4.082679 ACCACTGTCTCGATAACTTCTGTC 60.083 45.833 0.00 0.00 0.00 3.51
418 421 3.827302 ACCACTGTCTCGATAACTTCTGT 59.173 43.478 0.00 0.00 0.00 3.41
419 422 4.442375 ACCACTGTCTCGATAACTTCTG 57.558 45.455 0.00 0.00 0.00 3.02
420 423 5.470047 AAACCACTGTCTCGATAACTTCT 57.530 39.130 0.00 0.00 0.00 2.85
421 424 7.647907 TTAAAACCACTGTCTCGATAACTTC 57.352 36.000 0.00 0.00 0.00 3.01
422 425 7.713942 AGTTTAAAACCACTGTCTCGATAACTT 59.286 33.333 0.00 0.00 0.00 2.66
423 426 7.215085 AGTTTAAAACCACTGTCTCGATAACT 58.785 34.615 0.00 0.00 0.00 2.24
424 427 7.417496 AGTTTAAAACCACTGTCTCGATAAC 57.583 36.000 0.00 0.00 0.00 1.89
425 428 8.981647 GTAAGTTTAAAACCACTGTCTCGATAA 58.018 33.333 0.00 0.00 0.00 1.75
426 429 8.362639 AGTAAGTTTAAAACCACTGTCTCGATA 58.637 33.333 0.00 0.00 0.00 2.92
427 430 7.170998 CAGTAAGTTTAAAACCACTGTCTCGAT 59.829 37.037 12.74 0.00 38.85 3.59
428 431 6.477688 CAGTAAGTTTAAAACCACTGTCTCGA 59.522 38.462 12.74 0.00 38.85 4.04
429 432 6.477688 TCAGTAAGTTTAAAACCACTGTCTCG 59.522 38.462 17.27 0.00 41.79 4.04
430 433 7.781548 TCAGTAAGTTTAAAACCACTGTCTC 57.218 36.000 17.27 0.00 41.79 3.36
483 486 8.918658 GCGATGCATACAATCATTTTATGAATT 58.081 29.630 7.60 0.00 43.50 2.17
484 487 7.543172 GGCGATGCATACAATCATTTTATGAAT 59.457 33.333 7.60 2.59 43.50 2.57
485 488 6.862608 GGCGATGCATACAATCATTTTATGAA 59.137 34.615 7.60 0.00 43.50 2.57
486 489 6.380995 GGCGATGCATACAATCATTTTATGA 58.619 36.000 7.60 0.00 44.55 2.15
487 490 5.574055 GGGCGATGCATACAATCATTTTATG 59.426 40.000 0.00 0.00 0.00 1.90
488 491 5.243507 TGGGCGATGCATACAATCATTTTAT 59.756 36.000 0.00 0.00 0.00 1.40
489 492 4.582240 TGGGCGATGCATACAATCATTTTA 59.418 37.500 0.00 0.00 0.00 1.52
490 493 3.384146 TGGGCGATGCATACAATCATTTT 59.616 39.130 0.00 0.00 0.00 1.82
491 494 2.957680 TGGGCGATGCATACAATCATTT 59.042 40.909 0.00 0.00 0.00 2.32
492 495 2.555325 CTGGGCGATGCATACAATCATT 59.445 45.455 0.00 0.00 0.00 2.57
493 496 2.156917 CTGGGCGATGCATACAATCAT 58.843 47.619 0.00 0.00 0.00 2.45
494 497 1.140652 TCTGGGCGATGCATACAATCA 59.859 47.619 0.00 0.00 0.00 2.57
495 498 1.882912 TCTGGGCGATGCATACAATC 58.117 50.000 0.00 0.00 0.00 2.67
496 499 2.156917 CATCTGGGCGATGCATACAAT 58.843 47.619 0.00 0.00 42.75 2.71
497 500 1.596603 CATCTGGGCGATGCATACAA 58.403 50.000 0.00 0.00 42.75 2.41
498 501 3.310727 CATCTGGGCGATGCATACA 57.689 52.632 0.00 0.00 42.75 2.29
505 508 1.600076 GCATCTGCATCTGGGCGAT 60.600 57.895 0.00 0.00 41.59 4.58
506 509 2.203112 GCATCTGCATCTGGGCGA 60.203 61.111 0.00 0.00 41.59 5.54
507 510 3.285215 GGCATCTGCATCTGGGCG 61.285 66.667 4.33 0.00 44.36 6.13
508 511 2.910994 GGGCATCTGCATCTGGGC 60.911 66.667 4.33 0.00 44.36 5.36
509 512 2.593725 CGGGCATCTGCATCTGGG 60.594 66.667 4.33 0.00 44.36 4.45
510 513 2.593725 CCGGGCATCTGCATCTGG 60.594 66.667 4.33 0.00 44.36 3.86
511 514 2.593725 CCCGGGCATCTGCATCTG 60.594 66.667 8.08 0.00 44.36 2.90
512 515 3.882326 CCCCGGGCATCTGCATCT 61.882 66.667 17.73 0.00 44.36 2.90
513 516 4.195334 ACCCCGGGCATCTGCATC 62.195 66.667 17.73 0.00 44.36 3.91
514 517 4.195334 GACCCCGGGCATCTGCAT 62.195 66.667 17.73 0.00 44.36 3.96
516 519 4.195334 ATGACCCCGGGCATCTGC 62.195 66.667 17.73 0.00 41.14 4.26
517 520 2.111878 GATGACCCCGGGCATCTG 59.888 66.667 25.71 12.14 35.20 2.90
518 521 3.171388 GGATGACCCCGGGCATCT 61.171 66.667 29.29 14.56 36.87 2.90
519 522 3.171388 AGGATGACCCCGGGCATC 61.171 66.667 25.25 25.25 36.35 3.91
520 523 3.171388 GAGGATGACCCCGGGCAT 61.171 66.667 17.73 14.92 36.73 4.40
523 526 1.571773 AAAAGGAGGATGACCCCGGG 61.572 60.000 15.80 15.80 36.73 5.73
524 527 0.107165 GAAAAGGAGGATGACCCCGG 60.107 60.000 0.00 0.00 36.73 5.73
525 528 0.618458 TGAAAAGGAGGATGACCCCG 59.382 55.000 0.00 0.00 36.73 5.73
526 529 2.899303 TTGAAAAGGAGGATGACCCC 57.101 50.000 0.00 0.00 36.73 4.95
527 530 5.745312 ATTTTTGAAAAGGAGGATGACCC 57.255 39.130 0.00 0.00 36.73 4.46
528 531 9.554395 TTTTTATTTTTGAAAAGGAGGATGACC 57.446 29.630 0.00 0.00 0.00 4.02
555 558 9.326413 GCAAGTGGAAGCTAGATTACTATTTTA 57.674 33.333 4.27 0.00 0.00 1.52
556 559 7.829211 TGCAAGTGGAAGCTAGATTACTATTTT 59.171 33.333 4.27 0.00 0.00 1.82
557 560 7.338710 TGCAAGTGGAAGCTAGATTACTATTT 58.661 34.615 4.27 0.00 0.00 1.40
558 561 6.889198 TGCAAGTGGAAGCTAGATTACTATT 58.111 36.000 4.27 0.00 0.00 1.73
559 562 6.485830 TGCAAGTGGAAGCTAGATTACTAT 57.514 37.500 4.27 0.00 0.00 2.12
560 563 5.682471 GCTGCAAGTGGAAGCTAGATTACTA 60.682 44.000 4.27 0.00 35.30 1.82
561 564 4.764172 CTGCAAGTGGAAGCTAGATTACT 58.236 43.478 4.27 0.00 0.00 2.24
562 565 3.311048 GCTGCAAGTGGAAGCTAGATTAC 59.689 47.826 0.00 0.00 35.30 1.89
563 566 3.055167 TGCTGCAAGTGGAAGCTAGATTA 60.055 43.478 0.00 0.00 35.30 1.75
564 567 2.290514 TGCTGCAAGTGGAAGCTAGATT 60.291 45.455 0.00 0.00 35.30 2.40
565 568 1.280133 TGCTGCAAGTGGAAGCTAGAT 59.720 47.619 0.00 0.00 35.30 1.98
566 569 0.686789 TGCTGCAAGTGGAAGCTAGA 59.313 50.000 0.00 0.00 35.30 2.43
567 570 0.801251 GTGCTGCAAGTGGAAGCTAG 59.199 55.000 2.77 0.00 35.30 3.42
568 571 0.950555 CGTGCTGCAAGTGGAAGCTA 60.951 55.000 2.77 0.00 35.30 3.32
569 572 2.256591 CGTGCTGCAAGTGGAAGCT 61.257 57.895 2.77 0.00 35.30 3.74
570 573 2.253452 CGTGCTGCAAGTGGAAGC 59.747 61.111 2.77 0.00 35.30 3.86
571 574 1.280746 CACGTGCTGCAAGTGGAAG 59.719 57.895 31.95 13.56 39.46 3.46
572 575 2.833533 GCACGTGCTGCAAGTGGAA 61.834 57.895 36.73 0.11 46.29 3.53
573 576 3.279116 GCACGTGCTGCAAGTGGA 61.279 61.111 36.73 0.86 46.29 4.02
581 584 4.360027 GTCTGCGTGCACGTGCTG 62.360 66.667 37.59 29.89 42.66 4.41
584 587 3.705638 CAGGTCTGCGTGCACGTG 61.706 66.667 36.80 28.73 42.22 4.49
585 588 3.848347 CTCAGGTCTGCGTGCACGT 62.848 63.158 36.80 16.34 42.22 4.49
586 589 2.825726 ATCTCAGGTCTGCGTGCACG 62.826 60.000 34.01 34.01 43.27 5.34
587 590 1.079543 ATCTCAGGTCTGCGTGCAC 60.080 57.895 6.82 6.82 0.00 4.57
588 591 1.079612 CATCTCAGGTCTGCGTGCA 60.080 57.895 0.00 0.00 0.00 4.57
589 592 2.459442 GCATCTCAGGTCTGCGTGC 61.459 63.158 0.00 0.69 0.00 5.34
590 593 1.812922 GGCATCTCAGGTCTGCGTG 60.813 63.158 0.00 0.00 36.76 5.34
591 594 1.830587 TTGGCATCTCAGGTCTGCGT 61.831 55.000 0.00 0.00 36.76 5.24
592 595 0.674581 TTTGGCATCTCAGGTCTGCG 60.675 55.000 0.00 0.00 36.76 5.18
593 596 1.093159 CTTTGGCATCTCAGGTCTGC 58.907 55.000 0.00 0.00 35.16 4.26
594 597 2.235650 TCTCTTTGGCATCTCAGGTCTG 59.764 50.000 0.00 0.00 0.00 3.51
595 598 2.544721 TCTCTTTGGCATCTCAGGTCT 58.455 47.619 0.00 0.00 0.00 3.85
596 599 3.340814 TTCTCTTTGGCATCTCAGGTC 57.659 47.619 0.00 0.00 0.00 3.85
597 600 3.618351 CATTCTCTTTGGCATCTCAGGT 58.382 45.455 0.00 0.00 0.00 4.00
598 601 2.358267 GCATTCTCTTTGGCATCTCAGG 59.642 50.000 0.00 0.00 0.00 3.86
599 602 2.031807 CGCATTCTCTTTGGCATCTCAG 59.968 50.000 0.00 0.00 0.00 3.35
600 603 2.011947 CGCATTCTCTTTGGCATCTCA 58.988 47.619 0.00 0.00 0.00 3.27
601 604 2.012673 ACGCATTCTCTTTGGCATCTC 58.987 47.619 0.00 0.00 0.00 2.75
602 605 2.119801 ACGCATTCTCTTTGGCATCT 57.880 45.000 0.00 0.00 0.00 2.90
603 606 3.198068 TCTACGCATTCTCTTTGGCATC 58.802 45.455 0.00 0.00 0.00 3.91
604 607 3.266510 TCTACGCATTCTCTTTGGCAT 57.733 42.857 0.00 0.00 0.00 4.40
605 608 2.760634 TCTACGCATTCTCTTTGGCA 57.239 45.000 0.00 0.00 0.00 4.92
606 609 3.262420 TCTTCTACGCATTCTCTTTGGC 58.738 45.455 0.00 0.00 0.00 4.52
607 610 5.728898 GCATTCTTCTACGCATTCTCTTTGG 60.729 44.000 0.00 0.00 0.00 3.28
608 611 5.163824 TGCATTCTTCTACGCATTCTCTTTG 60.164 40.000 0.00 0.00 0.00 2.77
609 612 4.937620 TGCATTCTTCTACGCATTCTCTTT 59.062 37.500 0.00 0.00 0.00 2.52
610 613 4.507710 TGCATTCTTCTACGCATTCTCTT 58.492 39.130 0.00 0.00 0.00 2.85
611 614 4.118410 CTGCATTCTTCTACGCATTCTCT 58.882 43.478 0.00 0.00 33.15 3.10
612 615 4.115516 TCTGCATTCTTCTACGCATTCTC 58.884 43.478 0.00 0.00 33.15 2.87
613 616 4.128925 TCTGCATTCTTCTACGCATTCT 57.871 40.909 0.00 0.00 33.15 2.40
614 617 4.331168 AGTTCTGCATTCTTCTACGCATTC 59.669 41.667 0.00 0.00 33.15 2.67
615 618 4.093998 CAGTTCTGCATTCTTCTACGCATT 59.906 41.667 0.00 0.00 33.15 3.56
616 619 3.620374 CAGTTCTGCATTCTTCTACGCAT 59.380 43.478 0.00 0.00 33.15 4.73
617 620 2.995939 CAGTTCTGCATTCTTCTACGCA 59.004 45.455 0.00 0.00 0.00 5.24
618 621 2.349886 CCAGTTCTGCATTCTTCTACGC 59.650 50.000 0.00 0.00 0.00 4.42
619 622 2.932614 CCCAGTTCTGCATTCTTCTACG 59.067 50.000 0.00 0.00 0.00 3.51
620 623 3.686726 CACCCAGTTCTGCATTCTTCTAC 59.313 47.826 0.00 0.00 0.00 2.59
621 624 3.869912 GCACCCAGTTCTGCATTCTTCTA 60.870 47.826 0.00 0.00 33.31 2.10
622 625 2.787994 CACCCAGTTCTGCATTCTTCT 58.212 47.619 0.00 0.00 0.00 2.85
623 626 1.200948 GCACCCAGTTCTGCATTCTTC 59.799 52.381 0.00 0.00 33.31 2.87
624 627 1.251251 GCACCCAGTTCTGCATTCTT 58.749 50.000 0.00 0.00 33.31 2.52
625 628 0.111061 TGCACCCAGTTCTGCATTCT 59.889 50.000 0.00 0.00 38.49 2.40
626 629 0.961019 TTGCACCCAGTTCTGCATTC 59.039 50.000 0.00 0.00 42.86 2.67
627 630 0.963962 CTTGCACCCAGTTCTGCATT 59.036 50.000 0.00 0.00 42.86 3.56
628 631 0.111061 TCTTGCACCCAGTTCTGCAT 59.889 50.000 0.00 0.00 42.86 3.96
629 632 0.111061 ATCTTGCACCCAGTTCTGCA 59.889 50.000 0.00 0.00 41.68 4.41
630 633 1.251251 AATCTTGCACCCAGTTCTGC 58.749 50.000 0.00 0.00 0.00 4.26
631 634 3.305608 GGAAAATCTTGCACCCAGTTCTG 60.306 47.826 0.00 0.00 0.00 3.02
632 635 2.893489 GGAAAATCTTGCACCCAGTTCT 59.107 45.455 0.00 0.00 0.00 3.01
633 636 2.627699 TGGAAAATCTTGCACCCAGTTC 59.372 45.455 0.00 0.00 0.00 3.01
634 637 2.676748 TGGAAAATCTTGCACCCAGTT 58.323 42.857 0.00 0.00 0.00 3.16
635 638 2.380064 TGGAAAATCTTGCACCCAGT 57.620 45.000 0.00 0.00 0.00 4.00
636 639 4.646040 TGATATGGAAAATCTTGCACCCAG 59.354 41.667 0.00 0.00 35.51 4.45
637 640 4.402155 GTGATATGGAAAATCTTGCACCCA 59.598 41.667 0.00 0.00 35.51 4.51
638 641 4.202151 GGTGATATGGAAAATCTTGCACCC 60.202 45.833 0.00 0.00 35.51 4.61
639 642 4.402155 TGGTGATATGGAAAATCTTGCACC 59.598 41.667 0.00 0.00 42.59 5.01
640 643 5.343249 GTGGTGATATGGAAAATCTTGCAC 58.657 41.667 0.00 0.00 35.51 4.57
641 644 4.096231 CGTGGTGATATGGAAAATCTTGCA 59.904 41.667 0.00 0.00 37.29 4.08
642 645 4.096382 ACGTGGTGATATGGAAAATCTTGC 59.904 41.667 0.00 0.00 0.00 4.01
643 646 5.123820 ACACGTGGTGATATGGAAAATCTTG 59.876 40.000 21.57 0.00 36.96 3.02
644 647 5.253330 ACACGTGGTGATATGGAAAATCTT 58.747 37.500 21.57 0.00 36.96 2.40
645 648 4.843728 ACACGTGGTGATATGGAAAATCT 58.156 39.130 21.57 0.00 36.96 2.40
646 649 5.560966 AACACGTGGTGATATGGAAAATC 57.439 39.130 21.57 0.00 36.96 2.17
647 650 6.177610 AGTAACACGTGGTGATATGGAAAAT 58.822 36.000 18.38 0.00 36.96 1.82
648 651 5.553123 AGTAACACGTGGTGATATGGAAAA 58.447 37.500 18.38 0.00 36.96 2.29
649 652 5.155278 AGTAACACGTGGTGATATGGAAA 57.845 39.130 18.38 0.00 36.96 3.13
650 653 4.811969 AGTAACACGTGGTGATATGGAA 57.188 40.909 18.38 0.00 36.96 3.53
651 654 4.020928 ACAAGTAACACGTGGTGATATGGA 60.021 41.667 18.38 0.00 36.96 3.41
652 655 4.250464 ACAAGTAACACGTGGTGATATGG 58.750 43.478 18.38 3.29 36.96 2.74
653 656 4.328983 GGACAAGTAACACGTGGTGATATG 59.671 45.833 18.38 12.23 36.96 1.78
654 657 4.501071 GGACAAGTAACACGTGGTGATAT 58.499 43.478 18.38 0.00 36.96 1.63
655 658 3.612241 CGGACAAGTAACACGTGGTGATA 60.612 47.826 18.38 2.33 36.96 2.15
656 659 2.762745 GGACAAGTAACACGTGGTGAT 58.237 47.619 18.38 0.55 36.96 3.06
657 660 1.536496 CGGACAAGTAACACGTGGTGA 60.536 52.381 18.38 0.00 36.96 4.02
658 661 0.856641 CGGACAAGTAACACGTGGTG 59.143 55.000 18.38 9.88 39.75 4.17
659 662 0.746063 TCGGACAAGTAACACGTGGT 59.254 50.000 21.57 17.39 31.79 4.16
660 663 1.415374 CTCGGACAAGTAACACGTGG 58.585 55.000 21.57 2.84 31.79 4.94
661 664 1.415374 CCTCGGACAAGTAACACGTG 58.585 55.000 15.48 15.48 33.76 4.49
662 665 0.319297 GCCTCGGACAAGTAACACGT 60.319 55.000 0.00 0.00 0.00 4.49
663 666 0.319211 TGCCTCGGACAAGTAACACG 60.319 55.000 0.00 0.00 0.00 4.49
664 667 1.000506 TCTGCCTCGGACAAGTAACAC 59.999 52.381 0.00 0.00 0.00 3.32
665 668 1.334160 TCTGCCTCGGACAAGTAACA 58.666 50.000 0.00 0.00 0.00 2.41
666 669 2.450609 TTCTGCCTCGGACAAGTAAC 57.549 50.000 0.00 0.00 0.00 2.50
667 670 3.695830 ATTTCTGCCTCGGACAAGTAA 57.304 42.857 0.00 0.00 0.00 2.24
668 671 4.020928 TGTTATTTCTGCCTCGGACAAGTA 60.021 41.667 0.00 0.00 0.00 2.24
669 672 3.244422 TGTTATTTCTGCCTCGGACAAGT 60.244 43.478 0.00 0.00 0.00 3.16
670 673 3.334691 TGTTATTTCTGCCTCGGACAAG 58.665 45.455 0.00 0.00 0.00 3.16
671 674 3.410631 TGTTATTTCTGCCTCGGACAA 57.589 42.857 0.00 0.00 0.00 3.18
672 675 3.410631 TTGTTATTTCTGCCTCGGACA 57.589 42.857 0.00 0.00 0.00 4.02
673 676 3.938963 TCATTGTTATTTCTGCCTCGGAC 59.061 43.478 0.00 0.00 0.00 4.79
674 677 3.938963 GTCATTGTTATTTCTGCCTCGGA 59.061 43.478 0.00 0.00 0.00 4.55
675 678 3.689161 TGTCATTGTTATTTCTGCCTCGG 59.311 43.478 0.00 0.00 0.00 4.63
676 679 4.201851 CCTGTCATTGTTATTTCTGCCTCG 60.202 45.833 0.00 0.00 0.00 4.63
677 680 4.702131 ACCTGTCATTGTTATTTCTGCCTC 59.298 41.667 0.00 0.00 0.00 4.70
678 681 4.666512 ACCTGTCATTGTTATTTCTGCCT 58.333 39.130 0.00 0.00 0.00 4.75
679 682 4.142381 GGACCTGTCATTGTTATTTCTGCC 60.142 45.833 0.00 0.00 0.00 4.85
680 683 4.702131 AGGACCTGTCATTGTTATTTCTGC 59.298 41.667 0.00 0.00 0.00 4.26
681 684 7.770433 TCATAGGACCTGTCATTGTTATTTCTG 59.230 37.037 3.53 0.00 0.00 3.02
682 685 7.770897 GTCATAGGACCTGTCATTGTTATTTCT 59.229 37.037 3.53 0.00 38.12 2.52
683 686 7.552687 TGTCATAGGACCTGTCATTGTTATTTC 59.447 37.037 3.53 0.00 43.65 2.17
684 687 7.402054 TGTCATAGGACCTGTCATTGTTATTT 58.598 34.615 3.53 0.00 43.65 1.40
685 688 6.957631 TGTCATAGGACCTGTCATTGTTATT 58.042 36.000 3.53 0.00 43.65 1.40
686 689 6.560003 TGTCATAGGACCTGTCATTGTTAT 57.440 37.500 3.53 0.00 43.65 1.89
687 690 6.367374 TTGTCATAGGACCTGTCATTGTTA 57.633 37.500 3.53 0.00 43.65 2.41
688 691 4.908601 TGTCATAGGACCTGTCATTGTT 57.091 40.909 3.53 0.00 43.65 2.83
689 692 4.908601 TTGTCATAGGACCTGTCATTGT 57.091 40.909 3.53 0.00 43.65 2.71
690 693 4.577693 CCATTGTCATAGGACCTGTCATTG 59.422 45.833 3.53 0.17 43.65 2.82
691 694 4.785301 CCATTGTCATAGGACCTGTCATT 58.215 43.478 3.53 0.00 43.65 2.57
692 695 3.434167 GCCATTGTCATAGGACCTGTCAT 60.434 47.826 3.53 0.00 43.65 3.06
693 696 2.092968 GCCATTGTCATAGGACCTGTCA 60.093 50.000 3.53 0.00 43.65 3.58
694 697 2.092968 TGCCATTGTCATAGGACCTGTC 60.093 50.000 3.53 0.00 43.65 3.51
695 698 1.915489 TGCCATTGTCATAGGACCTGT 59.085 47.619 3.53 0.00 43.65 4.00
696 699 2.569059 CTGCCATTGTCATAGGACCTG 58.431 52.381 3.53 2.86 43.65 4.00
697 700 1.492176 CCTGCCATTGTCATAGGACCT 59.508 52.381 4.87 0.00 43.65 3.85
698 701 1.212935 ACCTGCCATTGTCATAGGACC 59.787 52.381 4.87 0.00 43.65 4.46
699 702 2.565841 GACCTGCCATTGTCATAGGAC 58.434 52.381 0.00 0.00 44.57 3.85
700 703 1.490490 GGACCTGCCATTGTCATAGGA 59.510 52.381 0.00 0.00 36.34 2.94
701 704 1.492176 AGGACCTGCCATTGTCATAGG 59.508 52.381 0.00 0.00 40.02 2.57
702 705 4.630644 ATAGGACCTGCCATTGTCATAG 57.369 45.455 3.53 0.00 40.02 2.23
703 706 7.995052 ATATATAGGACCTGCCATTGTCATA 57.005 36.000 3.53 0.00 40.02 2.15
704 707 6.898171 ATATATAGGACCTGCCATTGTCAT 57.102 37.500 3.53 0.00 40.02 3.06
705 708 7.995052 ATATATATAGGACCTGCCATTGTCA 57.005 36.000 3.53 0.00 40.02 3.58
772 775 9.231297 GTTGCACCAACCTTGTCATATATATAT 57.769 33.333 0.00 0.00 38.30 0.86
773 776 8.214364 TGTTGCACCAACCTTGTCATATATATA 58.786 33.333 5.72 0.00 42.96 0.86
774 777 7.059788 TGTTGCACCAACCTTGTCATATATAT 58.940 34.615 5.72 0.00 42.96 0.86
775 778 6.418946 TGTTGCACCAACCTTGTCATATATA 58.581 36.000 5.72 0.00 42.96 0.86
776 779 5.260424 TGTTGCACCAACCTTGTCATATAT 58.740 37.500 5.72 0.00 42.96 0.86
777 780 4.657013 TGTTGCACCAACCTTGTCATATA 58.343 39.130 5.72 0.00 42.96 0.86
778 781 3.495331 TGTTGCACCAACCTTGTCATAT 58.505 40.909 5.72 0.00 42.96 1.78
779 782 2.937519 TGTTGCACCAACCTTGTCATA 58.062 42.857 5.72 0.00 42.96 2.15
780 783 1.774110 TGTTGCACCAACCTTGTCAT 58.226 45.000 5.72 0.00 42.96 3.06
781 784 1.680735 GATGTTGCACCAACCTTGTCA 59.319 47.619 5.72 0.00 42.96 3.58
782 785 1.680735 TGATGTTGCACCAACCTTGTC 59.319 47.619 5.72 1.00 42.96 3.18
783 786 1.408702 GTGATGTTGCACCAACCTTGT 59.591 47.619 5.72 0.00 42.96 3.16
887 890 6.095160 AGACCGCCGGAAGACTATATATAAAG 59.905 42.308 11.71 0.00 0.00 1.85
947 951 3.496884 GCTCAGGTTTCACGTGTATGAAA 59.503 43.478 16.51 5.72 44.40 2.69
948 952 3.064207 GCTCAGGTTTCACGTGTATGAA 58.936 45.455 16.51 0.00 36.80 2.57
949 953 2.611971 GGCTCAGGTTTCACGTGTATGA 60.612 50.000 16.51 11.99 35.64 2.15
950 954 1.732259 GGCTCAGGTTTCACGTGTATG 59.268 52.381 16.51 8.43 35.64 2.39
951 955 1.338769 GGGCTCAGGTTTCACGTGTAT 60.339 52.381 16.51 0.00 35.64 2.29
952 956 0.034337 GGGCTCAGGTTTCACGTGTA 59.966 55.000 16.51 2.27 35.64 2.90
953 957 1.227853 GGGCTCAGGTTTCACGTGT 60.228 57.895 16.51 0.00 35.64 4.49
954 958 0.606401 ATGGGCTCAGGTTTCACGTG 60.606 55.000 9.94 9.94 35.48 4.49
955 959 0.110486 AATGGGCTCAGGTTTCACGT 59.890 50.000 0.00 0.00 0.00 4.49
956 960 0.523072 CAATGGGCTCAGGTTTCACG 59.477 55.000 0.00 0.00 0.00 4.35
957 961 0.244721 GCAATGGGCTCAGGTTTCAC 59.755 55.000 0.00 0.00 40.25 3.18
958 962 0.178967 TGCAATGGGCTCAGGTTTCA 60.179 50.000 0.00 0.00 45.15 2.69
959 963 1.134907 CATGCAATGGGCTCAGGTTTC 60.135 52.381 0.00 0.00 41.79 2.78
960 964 0.899720 CATGCAATGGGCTCAGGTTT 59.100 50.000 0.00 0.00 41.79 3.27
961 965 0.040058 TCATGCAATGGGCTCAGGTT 59.960 50.000 0.00 0.00 46.73 3.50
962 966 0.395311 CTCATGCAATGGGCTCAGGT 60.395 55.000 0.00 0.00 46.73 4.00
963 967 1.107538 CCTCATGCAATGGGCTCAGG 61.108 60.000 0.00 0.00 45.87 3.86
964 968 0.395311 ACCTCATGCAATGGGCTCAG 60.395 55.000 0.00 0.00 45.87 3.35
965 969 0.681887 CACCTCATGCAATGGGCTCA 60.682 55.000 0.00 0.00 45.87 4.26
966 970 0.394762 TCACCTCATGCAATGGGCTC 60.395 55.000 0.00 0.00 45.87 4.70
967 971 0.260816 ATCACCTCATGCAATGGGCT 59.739 50.000 0.00 0.00 45.87 5.19
968 972 0.672342 GATCACCTCATGCAATGGGC 59.328 55.000 0.00 0.00 45.87 5.36
970 974 0.309922 GCGATCACCTCATGCAATGG 59.690 55.000 0.00 0.00 46.73 3.16
1031 1035 1.984570 CCAGACTGAAGGAGGCGGA 60.985 63.158 3.32 0.00 33.15 5.54
1050 1054 0.179034 GGATGGACTGGTGATGAGGC 60.179 60.000 0.00 0.00 0.00 4.70
1075 1079 1.297745 CTAACGAGAGAGCGGTCGC 60.298 63.158 10.56 10.56 39.89 5.19
1201 1208 2.527100 CTTACCAGAAGAAGGCGTACG 58.473 52.381 11.84 11.84 0.00 3.67
1207 1230 4.389374 TCAAACTGCTTACCAGAAGAAGG 58.611 43.478 0.00 0.00 44.64 3.46
1222 1245 2.421424 GCAAGGCTATGGACTCAAACTG 59.579 50.000 0.00 0.00 0.00 3.16
1263 1531 1.189524 CCAGTGTACCCCTTCCACGA 61.190 60.000 0.00 0.00 34.34 4.35
1266 1534 1.061546 GAACCAGTGTACCCCTTCCA 58.938 55.000 0.00 0.00 0.00 3.53
1267 1535 0.327259 GGAACCAGTGTACCCCTTCC 59.673 60.000 0.00 0.00 0.00 3.46
1268 1536 1.278413 GAGGAACCAGTGTACCCCTTC 59.722 57.143 0.00 0.00 0.00 3.46
1285 1599 9.892130 AACATAGAAGAGTTACATTTTAGGAGG 57.108 33.333 0.00 0.00 0.00 4.30
1490 1936 7.288672 ACGAACTTAAAGCATTTAGTCGAAAG 58.711 34.615 14.62 0.19 42.24 2.62
1898 2389 2.354821 ACGTGTCAAGACCTTTCAAAGC 59.645 45.455 0.00 0.00 0.00 3.51
1957 2448 3.992943 TCCATTACCGTGGAGATGTTT 57.007 42.857 0.00 0.00 43.20 2.83
1991 2482 2.407340 AGACTGAAGCCTATAGGGGG 57.593 55.000 20.58 0.00 35.18 5.40
2169 2969 3.706086 AGCACCTTTCCTGTCAAATTTGT 59.294 39.130 17.47 0.00 0.00 2.83
3519 5011 4.221924 TGGTCAAATTACCTCTCGATGTGA 59.778 41.667 0.00 0.00 40.44 3.58
3685 5191 0.532862 CGTGAGTGGATATGGTGGCC 60.533 60.000 0.00 0.00 0.00 5.36
3721 5227 7.078011 TGCAATAGTTTTCGCACATGTAATA 57.922 32.000 0.00 0.00 0.00 0.98
4125 5652 5.096169 CACGTGGTAGTTATCAACTCAGAG 58.904 45.833 7.95 0.00 41.77 3.35
4365 5899 6.969473 GCTTTTGATAATGTACTCTTTGAGGC 59.031 38.462 0.00 0.00 33.35 4.70
5111 6668 4.979943 TTGTGACAAAAGCATCACTGAA 57.020 36.364 0.00 0.00 44.59 3.02
5179 6736 4.081309 ACCAAGCCCATCTTTGATTGAATG 60.081 41.667 0.00 0.00 31.27 2.67
5217 6774 4.262976 CGCGCTACTTTTTCATGGATTTTC 59.737 41.667 5.56 0.00 0.00 2.29
5257 6815 2.096069 TCTGGATACGTTATAGCGACGC 60.096 50.000 16.28 13.03 43.92 5.19
5260 6818 3.057736 GCCTTCTGGATACGTTATAGCGA 60.058 47.826 16.28 0.01 42.51 4.93
5268 6826 0.833287 AGCATGCCTTCTGGATACGT 59.167 50.000 15.66 0.00 42.51 3.57
5332 6959 7.094631 TGGCTGATTTGAGATTTCAGAAATTG 58.905 34.615 9.84 0.00 39.36 2.32
5334 6961 6.845758 TGGCTGATTTGAGATTTCAGAAAT 57.154 33.333 8.20 8.20 39.36 2.17
5423 7050 8.150296 CACATGTGATGACCCACTATATAAAGA 58.850 37.037 21.64 0.00 37.89 2.52
5453 7080 7.676004 TCCTGATATTTGTGACACTTCTAACA 58.324 34.615 7.20 0.84 0.00 2.41
5477 7104 6.307318 CACATGCATAGCTTTTCTTTTCACTC 59.693 38.462 0.00 0.00 0.00 3.51
5512 7139 4.244862 GGCCCAACAAAATCATAAGTGTG 58.755 43.478 0.00 0.00 0.00 3.82
5526 7412 0.605319 GTTGATGTCTCGGCCCAACA 60.605 55.000 12.26 7.72 37.59 3.33
5558 7444 5.812642 CGATCCACTTACTATGCAACTCTTT 59.187 40.000 0.00 0.00 0.00 2.52
5568 7454 2.249139 GGGCCTCGATCCACTTACTAT 58.751 52.381 0.84 0.00 0.00 2.12
5572 7458 4.798585 TGGGCCTCGATCCACTTA 57.201 55.556 4.53 0.00 0.00 2.24
5658 7545 3.004862 GACTTGTTTATGGGGTGTACCG 58.995 50.000 0.00 0.00 41.60 4.02
5669 7556 5.520288 CGATCTTGACCATCGACTTGTTTAT 59.480 40.000 0.00 0.00 44.95 1.40
5676 7563 1.405821 GACCGATCTTGACCATCGACT 59.594 52.381 3.68 0.00 44.95 4.18
5774 7661 8.092068 CCCCATGATACGAATACAACTGTAATA 58.908 37.037 0.00 0.00 33.76 0.98
5824 7784 2.892852 CACCACTGACATGTTTGGGAAT 59.107 45.455 20.32 3.54 33.00 3.01
5838 7798 0.617413 AGAATCTCTGGCCACCACTG 59.383 55.000 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.