Multiple sequence alignment - TraesCS2D01G028000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G028000 chr2D 100.000 3934 0 0 1 3934 11523974 11520041 0.000000e+00 7265.0
1 TraesCS2D01G028000 chr2D 96.314 407 14 1 1 407 430919700 430920105 0.000000e+00 667.0
2 TraesCS2D01G028000 chr2D 95.823 407 16 1 1 407 610725246 610724841 0.000000e+00 656.0
3 TraesCS2D01G028000 chr2D 85.378 595 76 7 1052 1636 11462509 11461916 1.210000e-169 606.0
4 TraesCS2D01G028000 chr2D 82.365 499 72 11 2080 2572 11432783 11432295 1.690000e-113 420.0
5 TraesCS2D01G028000 chr2D 98.000 50 1 0 3018 3067 331544187 331544236 1.950000e-13 87.9
6 TraesCS2D01G028000 chr2D 94.643 56 2 1 3012 3066 566655120 566655175 7.000000e-13 86.1
7 TraesCS2D01G028000 chr2D 93.023 43 3 0 3859 3901 382130334 382130292 3.280000e-06 63.9
8 TraesCS2D01G028000 chr2A 93.898 3032 165 12 812 3834 12131865 12128845 0.000000e+00 4556.0
9 TraesCS2D01G028000 chr2A 91.422 921 69 4 2084 2995 12140711 12139792 0.000000e+00 1254.0
10 TraesCS2D01G028000 chr2A 89.302 860 58 8 812 1671 12141846 12141021 0.000000e+00 1048.0
11 TraesCS2D01G028000 chr2A 81.604 723 116 13 2229 2946 12290330 12289620 2.040000e-162 582.0
12 TraesCS2D01G028000 chr2A 82.353 510 80 8 2069 2572 12035113 12034608 6.040000e-118 435.0
13 TraesCS2D01G028000 chr2A 80.814 516 82 9 2069 2572 12026483 12025973 4.770000e-104 388.0
14 TraesCS2D01G028000 chr2A 78.996 538 98 9 1080 1611 12249927 12249399 1.740000e-93 353.0
15 TraesCS2D01G028000 chr2A 84.694 294 43 2 2657 2950 12025492 12025201 3.840000e-75 292.0
16 TraesCS2D01G028000 chr2A 76.907 485 71 23 3138 3609 12025087 12024631 1.830000e-58 237.0
17 TraesCS2D01G028000 chr2A 85.787 197 28 0 2762 2958 12218926 12218730 3.980000e-50 209.0
18 TraesCS2D01G028000 chr2A 87.730 163 19 1 1907 2068 778130759 778130597 5.190000e-44 189.0
19 TraesCS2D01G028000 chr2A 85.635 181 12 8 3063 3231 12139792 12139614 1.120000e-40 178.0
20 TraesCS2D01G028000 chr2A 82.911 158 25 1 1382 1537 12220063 12219906 1.470000e-29 141.0
21 TraesCS2D01G028000 chr2A 96.429 56 1 1 484 538 12133650 12133595 1.510000e-14 91.6
22 TraesCS2D01G028000 chr2A 89.231 65 5 2 3018 3082 708157934 708157996 3.260000e-11 80.5
23 TraesCS2D01G028000 chr2B 92.663 2167 122 17 873 3018 17899832 17897682 0.000000e+00 3086.0
24 TraesCS2D01G028000 chr2B 83.599 878 116 15 2080 2941 17836650 17835785 0.000000e+00 798.0
25 TraesCS2D01G028000 chr2B 95.823 407 15 1 1 407 239087565 239087969 0.000000e+00 656.0
26 TraesCS2D01G028000 chr2B 91.232 479 30 7 407 874 17900391 17899914 3.310000e-180 641.0
27 TraesCS2D01G028000 chr2B 84.821 560 64 12 1059 1611 17838160 17837615 9.610000e-151 544.0
28 TraesCS2D01G028000 chr2B 90.674 386 31 3 3061 3443 17897668 17897285 3.510000e-140 508.0
29 TraesCS2D01G028000 chr2B 89.620 395 30 4 3439 3831 17895979 17895594 3.530000e-135 492.0
30 TraesCS2D01G028000 chr2B 78.427 445 60 18 3152 3591 17835633 17835220 1.400000e-64 257.0
31 TraesCS2D01G028000 chr7B 97.059 408 11 1 1 408 262056760 262056354 0.000000e+00 686.0
32 TraesCS2D01G028000 chr6D 95.823 407 17 0 1 407 374599167 374598761 0.000000e+00 658.0
33 TraesCS2D01G028000 chr6D 86.391 169 21 2 1907 2073 428908338 428908506 2.410000e-42 183.0
34 TraesCS2D01G028000 chr6D 85.802 162 22 1 1907 2067 338408565 338408404 1.880000e-38 171.0
35 TraesCS2D01G028000 chr6D 85.135 74 7 3 2991 3063 420744308 420744238 5.450000e-09 73.1
36 TraesCS2D01G028000 chr6B 95.823 407 16 1 1 407 66941489 66941894 0.000000e+00 656.0
37 TraesCS2D01G028000 chr4D 94.762 420 19 2 1 420 330420608 330420192 0.000000e+00 651.0
38 TraesCS2D01G028000 chr4D 100.000 50 0 0 3018 3067 478671897 478671848 4.190000e-15 93.5
39 TraesCS2D01G028000 chr4D 83.951 81 6 6 3018 3095 236940172 236940096 1.960000e-08 71.3
40 TraesCS2D01G028000 chr3D 95.343 408 15 1 1 408 28006714 28006311 0.000000e+00 645.0
41 TraesCS2D01G028000 chr3D 95.086 407 19 1 1 407 28005565 28005970 1.190000e-179 640.0
42 TraesCS2D01G028000 chr3B 78.272 787 146 16 2167 2941 752440433 752441206 2.130000e-132 483.0
43 TraesCS2D01G028000 chr3B 82.432 518 74 10 1088 1604 752439359 752439860 1.680000e-118 436.0
44 TraesCS2D01G028000 chr3B 98.039 51 1 0 3018 3068 46302547 46302497 5.410000e-14 89.8
45 TraesCS2D01G028000 chrUn 82.353 510 80 8 2069 2572 276512299 276511794 6.040000e-118 435.0
46 TraesCS2D01G028000 chrUn 92.157 153 12 0 1484 1636 276513926 276513774 2.380000e-52 217.0
47 TraesCS2D01G028000 chr1A 78.269 520 102 7 1086 1604 12355209 12355718 1.360000e-84 324.0
48 TraesCS2D01G028000 chr1A 83.529 170 27 1 1907 2075 586049394 586049225 1.460000e-34 158.0
49 TraesCS2D01G028000 chr7A 86.164 159 19 2 1910 2067 507432963 507432807 6.760000e-38 169.0
50 TraesCS2D01G028000 chr4B 85.366 164 23 1 1907 2069 167243473 167243636 6.760000e-38 169.0
51 TraesCS2D01G028000 chr1D 84.663 163 22 3 1907 2067 286378482 286378321 4.070000e-35 159.0
52 TraesCS2D01G028000 chr4A 91.803 61 2 3 3018 3076 685751143 685751084 9.060000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G028000 chr2D 11520041 11523974 3933 True 7265.000000 7265 100.000000 1 3934 1 chr2D.!!$R3 3933
1 TraesCS2D01G028000 chr2D 11461916 11462509 593 True 606.000000 606 85.378000 1052 1636 1 chr2D.!!$R2 584
2 TraesCS2D01G028000 chr2A 12128845 12133650 4805 True 2323.800000 4556 95.163500 484 3834 2 chr2A.!!$R6 3350
3 TraesCS2D01G028000 chr2A 12139614 12141846 2232 True 826.666667 1254 88.786333 812 3231 3 chr2A.!!$R7 2419
4 TraesCS2D01G028000 chr2A 12289620 12290330 710 True 582.000000 582 81.604000 2229 2946 1 chr2A.!!$R3 717
5 TraesCS2D01G028000 chr2A 12034608 12035113 505 True 435.000000 435 82.353000 2069 2572 1 chr2A.!!$R1 503
6 TraesCS2D01G028000 chr2A 12249399 12249927 528 True 353.000000 353 78.996000 1080 1611 1 chr2A.!!$R2 531
7 TraesCS2D01G028000 chr2A 12024631 12026483 1852 True 305.666667 388 80.805000 2069 3609 3 chr2A.!!$R5 1540
8 TraesCS2D01G028000 chr2B 17895594 17900391 4797 True 1181.750000 3086 91.047250 407 3831 4 chr2B.!!$R2 3424
9 TraesCS2D01G028000 chr2B 17835220 17838160 2940 True 533.000000 798 82.282333 1059 3591 3 chr2B.!!$R1 2532
10 TraesCS2D01G028000 chr3B 752439359 752441206 1847 False 459.500000 483 80.352000 1088 2941 2 chr3B.!!$F1 1853
11 TraesCS2D01G028000 chrUn 276511794 276513926 2132 True 326.000000 435 87.255000 1484 2572 2 chrUn.!!$R1 1088
12 TraesCS2D01G028000 chr1A 12355209 12355718 509 False 324.000000 324 78.269000 1086 1604 1 chr1A.!!$F1 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
385 386 0.034896 ACCTAGAACCCGTGTTGCTG 59.965 55.0 0.00 0.00 33.97 4.41 F
387 388 0.320771 CTAGAACCCGTGTTGCTGCT 60.321 55.0 0.00 0.00 33.97 4.24 F
389 390 0.320771 AGAACCCGTGTTGCTGCTAG 60.321 55.0 0.00 0.00 33.97 3.42 F
395 396 0.593128 CGTGTTGCTGCTAGGCTTTT 59.407 50.0 0.00 0.00 0.00 2.27 F
1030 2593 0.679002 GCAGAGAGGAGGCAATTGCA 60.679 55.0 30.32 0.00 44.36 4.08 F
1033 2596 1.101331 GAGAGGAGGCAATTGCAAGG 58.899 55.0 30.32 0.34 44.36 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 3994 0.033601 TTCCATTCCCAATCCCACGG 60.034 55.000 0.00 0.0 0.00 4.94 R
1688 3995 1.102978 GTTCCATTCCCAATCCCACG 58.897 55.000 0.00 0.0 0.00 4.94 R
2137 5302 5.476945 GTGGGAAGTAATTTCACTGGACAAT 59.523 40.000 4.00 0.0 40.05 2.71 R
2608 5791 9.676861 CATGACACCCATATGTTGAATAGATAT 57.323 33.333 1.24 0.0 33.31 1.63 R
2683 6287 1.374252 CTGAACCCGTCGTTGGAGG 60.374 63.158 0.00 0.0 33.74 4.30 R
3051 6669 1.475403 CACTCATGTACTCCCTCCGT 58.525 55.000 0.00 0.0 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.818141 ATACTATGATTACATTTGTGGTCTCG 57.182 34.615 0.00 0.00 37.87 4.04
44 45 4.882671 ATGATTACATTTGTGGTCTCGC 57.117 40.909 0.00 0.00 32.21 5.03
45 46 3.669536 TGATTACATTTGTGGTCTCGCA 58.330 40.909 0.00 0.00 0.00 5.10
46 47 3.684305 TGATTACATTTGTGGTCTCGCAG 59.316 43.478 0.00 0.00 34.60 5.18
47 48 2.093306 TACATTTGTGGTCTCGCAGG 57.907 50.000 0.00 0.00 34.60 4.85
48 49 1.237285 ACATTTGTGGTCTCGCAGGC 61.237 55.000 0.00 0.00 34.60 4.85
49 50 1.073025 ATTTGTGGTCTCGCAGGCA 59.927 52.632 0.00 0.00 34.60 4.75
50 51 0.322816 ATTTGTGGTCTCGCAGGCAT 60.323 50.000 0.00 0.00 34.60 4.40
51 52 0.537143 TTTGTGGTCTCGCAGGCATT 60.537 50.000 0.00 0.00 34.60 3.56
52 53 0.537143 TTGTGGTCTCGCAGGCATTT 60.537 50.000 0.00 0.00 34.60 2.32
53 54 1.236616 TGTGGTCTCGCAGGCATTTG 61.237 55.000 0.00 0.00 0.00 2.32
54 55 1.073025 TGGTCTCGCAGGCATTTGT 59.927 52.632 0.00 0.00 0.00 2.83
55 56 0.323302 TGGTCTCGCAGGCATTTGTA 59.677 50.000 0.00 0.00 0.00 2.41
56 57 1.065491 TGGTCTCGCAGGCATTTGTAT 60.065 47.619 0.00 0.00 0.00 2.29
57 58 1.331756 GGTCTCGCAGGCATTTGTATG 59.668 52.381 0.00 0.00 34.76 2.39
58 59 2.009774 GTCTCGCAGGCATTTGTATGT 58.990 47.619 0.00 0.00 34.12 2.29
59 60 2.009051 TCTCGCAGGCATTTGTATGTG 58.991 47.619 0.00 0.00 34.12 3.21
60 61 1.739466 CTCGCAGGCATTTGTATGTGT 59.261 47.619 0.00 0.00 34.12 3.72
61 62 2.935849 CTCGCAGGCATTTGTATGTGTA 59.064 45.455 0.00 0.00 34.12 2.90
62 63 3.540617 TCGCAGGCATTTGTATGTGTAT 58.459 40.909 0.00 0.00 34.12 2.29
63 64 3.559655 TCGCAGGCATTTGTATGTGTATC 59.440 43.478 0.00 0.00 34.12 2.24
64 65 3.312146 CGCAGGCATTTGTATGTGTATCA 59.688 43.478 0.00 0.00 34.12 2.15
65 66 4.023792 CGCAGGCATTTGTATGTGTATCAT 60.024 41.667 0.00 0.00 40.25 2.45
66 67 5.217393 GCAGGCATTTGTATGTGTATCATG 58.783 41.667 0.00 0.00 37.91 3.07
67 68 5.008911 GCAGGCATTTGTATGTGTATCATGA 59.991 40.000 0.00 0.00 37.91 3.07
68 69 6.294342 GCAGGCATTTGTATGTGTATCATGAT 60.294 38.462 13.81 13.81 37.91 2.45
69 70 7.081976 CAGGCATTTGTATGTGTATCATGATG 58.918 38.462 18.72 0.00 37.91 3.07
70 71 6.999871 AGGCATTTGTATGTGTATCATGATGA 59.000 34.615 18.72 0.00 37.91 2.92
71 72 7.040892 AGGCATTTGTATGTGTATCATGATGAC 60.041 37.037 18.72 14.29 37.91 3.06
72 73 7.255208 GGCATTTGTATGTGTATCATGATGACA 60.255 37.037 18.72 19.00 37.91 3.58
73 74 8.294577 GCATTTGTATGTGTATCATGATGACAT 58.705 33.333 26.12 26.12 37.91 3.06
77 78 8.735692 TGTATGTGTATCATGATGACATTTGT 57.264 30.769 27.21 14.80 37.91 2.83
78 79 9.829507 TGTATGTGTATCATGATGACATTTGTA 57.170 29.630 27.21 14.79 37.91 2.41
81 82 9.346005 ATGTGTATCATGATGACATTTGTATGT 57.654 29.630 21.16 6.09 40.34 2.29
82 83 8.614346 TGTGTATCATGATGACATTTGTATGTG 58.386 33.333 18.72 0.00 44.90 3.21
83 84 7.588854 GTGTATCATGATGACATTTGTATGTGC 59.411 37.037 18.72 0.00 44.90 4.57
84 85 6.954487 ATCATGATGACATTTGTATGTGCT 57.046 33.333 7.59 0.00 44.90 4.40
85 86 8.992073 GTATCATGATGACATTTGTATGTGCTA 58.008 33.333 18.72 0.00 44.90 3.49
86 87 7.862512 TCATGATGACATTTGTATGTGCTAA 57.137 32.000 0.00 0.00 44.90 3.09
87 88 8.278729 TCATGATGACATTTGTATGTGCTAAA 57.721 30.769 0.00 0.00 44.90 1.85
88 89 8.400186 TCATGATGACATTTGTATGTGCTAAAG 58.600 33.333 0.00 0.00 44.90 1.85
89 90 7.920160 TGATGACATTTGTATGTGCTAAAGA 57.080 32.000 0.00 0.00 44.90 2.52
90 91 8.510243 TGATGACATTTGTATGTGCTAAAGAT 57.490 30.769 0.00 0.00 44.90 2.40
91 92 8.959548 TGATGACATTTGTATGTGCTAAAGATT 58.040 29.630 0.00 0.00 44.90 2.40
92 93 9.443283 GATGACATTTGTATGTGCTAAAGATTC 57.557 33.333 0.00 0.00 44.90 2.52
93 94 8.565896 TGACATTTGTATGTGCTAAAGATTCT 57.434 30.769 0.00 0.00 44.90 2.40
94 95 9.013229 TGACATTTGTATGTGCTAAAGATTCTT 57.987 29.630 0.00 0.00 44.90 2.52
95 96 9.495754 GACATTTGTATGTGCTAAAGATTCTTC 57.504 33.333 0.00 0.00 44.90 2.87
96 97 9.236006 ACATTTGTATGTGCTAAAGATTCTTCT 57.764 29.630 0.00 0.00 43.29 2.85
104 105 8.438676 TGTGCTAAAGATTCTTCTATAAAGCC 57.561 34.615 0.00 0.00 0.00 4.35
105 106 8.267894 TGTGCTAAAGATTCTTCTATAAAGCCT 58.732 33.333 0.00 0.00 0.00 4.58
106 107 8.555361 GTGCTAAAGATTCTTCTATAAAGCCTG 58.445 37.037 0.00 0.00 0.00 4.85
107 108 8.267894 TGCTAAAGATTCTTCTATAAAGCCTGT 58.732 33.333 0.00 0.00 0.00 4.00
108 109 9.114952 GCTAAAGATTCTTCTATAAAGCCTGTT 57.885 33.333 0.00 0.00 0.00 3.16
111 112 9.520515 AAAGATTCTTCTATAAAGCCTGTTCAA 57.479 29.630 0.00 0.00 0.00 2.69
112 113 9.520515 AAGATTCTTCTATAAAGCCTGTTCAAA 57.479 29.630 0.00 0.00 0.00 2.69
113 114 9.692325 AGATTCTTCTATAAAGCCTGTTCAAAT 57.308 29.630 0.00 0.00 0.00 2.32
116 117 9.733556 TTCTTCTATAAAGCCTGTTCAAATACA 57.266 29.630 0.00 0.00 0.00 2.29
117 118 9.733556 TCTTCTATAAAGCCTGTTCAAATACAA 57.266 29.630 0.00 0.00 0.00 2.41
121 122 9.906660 CTATAAAGCCTGTTCAAATACAAAACA 57.093 29.630 0.00 0.00 0.00 2.83
123 124 7.913674 AAAGCCTGTTCAAATACAAAACAAA 57.086 28.000 0.00 0.00 32.89 2.83
124 125 8.504812 AAAGCCTGTTCAAATACAAAACAAAT 57.495 26.923 0.00 0.00 32.89 2.32
125 126 9.606631 AAAGCCTGTTCAAATACAAAACAAATA 57.393 25.926 0.00 0.00 32.89 1.40
126 127 9.777297 AAGCCTGTTCAAATACAAAACAAATAT 57.223 25.926 0.00 0.00 32.89 1.28
127 128 9.206870 AGCCTGTTCAAATACAAAACAAATATG 57.793 29.630 0.00 0.00 32.89 1.78
128 129 7.956943 GCCTGTTCAAATACAAAACAAATATGC 59.043 33.333 0.00 0.00 32.89 3.14
129 130 8.986847 CCTGTTCAAATACAAAACAAATATGCA 58.013 29.630 0.00 0.00 32.89 3.96
131 132 9.755804 TGTTCAAATACAAAACAAATATGCAGA 57.244 25.926 0.00 0.00 30.39 4.26
134 135 9.755804 TCAAATACAAAACAAATATGCAGAACA 57.244 25.926 0.00 0.00 0.00 3.18
176 177 3.814577 GCAGTAGCGAGTGGAGAAA 57.185 52.632 3.71 0.00 0.00 2.52
177 178 2.080286 GCAGTAGCGAGTGGAGAAAA 57.920 50.000 3.71 0.00 0.00 2.29
178 179 1.996191 GCAGTAGCGAGTGGAGAAAAG 59.004 52.381 3.71 0.00 0.00 2.27
179 180 2.610727 GCAGTAGCGAGTGGAGAAAAGT 60.611 50.000 3.71 0.00 0.00 2.66
180 181 3.654414 CAGTAGCGAGTGGAGAAAAGTT 58.346 45.455 0.00 0.00 0.00 2.66
181 182 4.806330 CAGTAGCGAGTGGAGAAAAGTTA 58.194 43.478 0.00 0.00 0.00 2.24
182 183 4.859798 CAGTAGCGAGTGGAGAAAAGTTAG 59.140 45.833 0.00 0.00 0.00 2.34
183 184 2.689646 AGCGAGTGGAGAAAAGTTAGC 58.310 47.619 0.00 0.00 0.00 3.09
184 185 2.037251 AGCGAGTGGAGAAAAGTTAGCA 59.963 45.455 0.00 0.00 0.00 3.49
185 186 2.413453 GCGAGTGGAGAAAAGTTAGCAG 59.587 50.000 0.00 0.00 0.00 4.24
186 187 2.413453 CGAGTGGAGAAAAGTTAGCAGC 59.587 50.000 0.00 0.00 0.00 5.25
187 188 3.403038 GAGTGGAGAAAAGTTAGCAGCA 58.597 45.455 0.00 0.00 0.00 4.41
188 189 3.406764 AGTGGAGAAAAGTTAGCAGCAG 58.593 45.455 0.00 0.00 0.00 4.24
189 190 2.095516 GTGGAGAAAAGTTAGCAGCAGC 60.096 50.000 0.00 0.00 42.56 5.25
199 200 3.531829 GCAGCAGCGCGATAGTAG 58.468 61.111 12.10 0.00 39.35 2.57
200 201 2.653022 GCAGCAGCGCGATAGTAGC 61.653 63.158 12.10 2.35 41.01 3.58
201 202 1.299392 CAGCAGCGCGATAGTAGCA 60.299 57.895 12.10 0.00 42.62 3.49
202 203 1.007964 AGCAGCGCGATAGTAGCAG 60.008 57.895 12.10 0.00 42.62 4.24
203 204 1.299468 GCAGCGCGATAGTAGCAGT 60.299 57.895 12.10 0.00 42.62 4.40
204 205 0.040336 GCAGCGCGATAGTAGCAGTA 60.040 55.000 12.10 0.00 42.62 2.74
205 206 1.957089 CAGCGCGATAGTAGCAGTAG 58.043 55.000 12.10 0.00 42.62 2.57
206 207 0.238817 AGCGCGATAGTAGCAGTAGC 59.761 55.000 12.10 0.00 42.62 3.58
207 208 2.988931 CGCGATAGTAGCAGTAGCG 58.011 57.895 0.00 4.87 42.62 4.26
209 210 1.060726 GCGATAGTAGCAGTAGCGCG 61.061 60.000 14.52 0.00 46.55 6.86
216 217 3.112075 GCAGTAGCGCGCACAAGA 61.112 61.111 35.10 9.85 0.00 3.02
217 218 3.075998 CAGTAGCGCGCACAAGAG 58.924 61.111 35.10 13.78 0.00 2.85
218 219 1.444383 CAGTAGCGCGCACAAGAGA 60.444 57.895 35.10 5.87 0.00 3.10
219 220 1.008875 CAGTAGCGCGCACAAGAGAA 61.009 55.000 35.10 4.56 0.00 2.87
220 221 0.734253 AGTAGCGCGCACAAGAGAAG 60.734 55.000 35.10 0.00 0.00 2.85
221 222 2.094659 TAGCGCGCACAAGAGAAGC 61.095 57.895 35.10 0.00 0.00 3.86
225 226 4.783841 CGCACAAGAGAAGCGCGC 62.784 66.667 26.66 26.66 45.14 6.86
226 227 3.418068 GCACAAGAGAAGCGCGCT 61.418 61.111 31.32 31.32 0.00 5.92
227 228 2.094659 GCACAAGAGAAGCGCGCTA 61.095 57.895 36.73 0.00 0.00 4.26
228 229 1.424493 GCACAAGAGAAGCGCGCTAT 61.424 55.000 36.73 26.38 0.00 2.97
229 230 1.840181 CACAAGAGAAGCGCGCTATA 58.160 50.000 36.73 0.00 0.00 1.31
230 231 1.783711 CACAAGAGAAGCGCGCTATAG 59.216 52.381 36.73 22.04 0.00 1.31
231 232 0.781191 CAAGAGAAGCGCGCTATAGC 59.219 55.000 36.73 22.94 37.78 2.97
232 233 0.671251 AAGAGAAGCGCGCTATAGCT 59.329 50.000 36.73 27.14 46.97 3.32
233 234 1.524848 AGAGAAGCGCGCTATAGCTA 58.475 50.000 36.73 0.00 43.78 3.32
234 235 2.088423 AGAGAAGCGCGCTATAGCTAT 58.912 47.619 36.73 22.26 43.78 2.97
235 236 2.490115 AGAGAAGCGCGCTATAGCTATT 59.510 45.455 36.73 16.85 43.78 1.73
236 237 3.690139 AGAGAAGCGCGCTATAGCTATTA 59.310 43.478 36.73 0.00 43.78 0.98
237 238 4.022464 AGAAGCGCGCTATAGCTATTAG 57.978 45.455 36.73 7.61 43.78 1.73
238 239 2.196295 AGCGCGCTATAGCTATTAGC 57.804 50.000 35.79 15.79 42.60 3.09
239 240 1.472878 AGCGCGCTATAGCTATTAGCA 59.527 47.619 35.79 4.61 45.56 3.49
240 241 1.849219 GCGCGCTATAGCTATTAGCAG 59.151 52.381 26.67 19.10 45.56 4.24
241 242 2.732597 GCGCGCTATAGCTATTAGCAGT 60.733 50.000 26.67 8.03 45.56 4.40
242 243 3.487042 GCGCGCTATAGCTATTAGCAGTA 60.487 47.826 26.67 8.70 45.56 2.74
243 244 4.275662 CGCGCTATAGCTATTAGCAGTAG 58.724 47.826 21.98 17.08 45.56 2.57
244 245 4.039032 GCGCTATAGCTATTAGCAGTAGC 58.961 47.826 26.30 26.30 45.56 3.58
254 255 2.580867 GCAGTAGCGAGCTCCACG 60.581 66.667 8.47 0.00 0.00 4.94
255 256 2.103143 CAGTAGCGAGCTCCACGG 59.897 66.667 8.47 0.92 0.00 4.94
256 257 2.045242 AGTAGCGAGCTCCACGGA 60.045 61.111 8.47 0.00 0.00 4.69
257 258 1.677966 AGTAGCGAGCTCCACGGAA 60.678 57.895 8.47 0.00 0.00 4.30
258 259 1.226717 GTAGCGAGCTCCACGGAAG 60.227 63.158 8.47 0.00 0.00 3.46
259 260 1.378119 TAGCGAGCTCCACGGAAGA 60.378 57.895 8.47 0.00 0.00 2.87
260 261 0.963856 TAGCGAGCTCCACGGAAGAA 60.964 55.000 8.47 0.00 0.00 2.52
261 262 1.153549 GCGAGCTCCACGGAAGAAT 60.154 57.895 8.47 0.00 0.00 2.40
262 263 1.424493 GCGAGCTCCACGGAAGAATG 61.424 60.000 8.47 0.00 0.00 2.67
263 264 0.108615 CGAGCTCCACGGAAGAATGT 60.109 55.000 8.47 0.00 0.00 2.71
264 265 1.673033 CGAGCTCCACGGAAGAATGTT 60.673 52.381 8.47 0.00 0.00 2.71
265 266 1.734465 GAGCTCCACGGAAGAATGTTG 59.266 52.381 0.87 0.00 0.00 3.33
266 267 0.169009 GCTCCACGGAAGAATGTTGC 59.831 55.000 0.00 0.00 0.00 4.17
267 268 1.813513 CTCCACGGAAGAATGTTGCT 58.186 50.000 0.00 0.00 0.00 3.91
268 269 1.466167 CTCCACGGAAGAATGTTGCTG 59.534 52.381 0.00 0.00 0.00 4.41
269 270 0.109597 CCACGGAAGAATGTTGCTGC 60.110 55.000 0.00 0.00 0.00 5.25
270 271 0.877071 CACGGAAGAATGTTGCTGCT 59.123 50.000 0.00 0.00 0.00 4.24
271 272 2.076100 CACGGAAGAATGTTGCTGCTA 58.924 47.619 0.00 0.00 0.00 3.49
272 273 2.076863 ACGGAAGAATGTTGCTGCTAC 58.923 47.619 7.29 7.29 0.00 3.58
273 274 2.076100 CGGAAGAATGTTGCTGCTACA 58.924 47.619 18.46 18.46 0.00 2.74
274 275 2.159653 CGGAAGAATGTTGCTGCTACAC 60.160 50.000 18.52 7.77 0.00 2.90
275 276 3.077359 GGAAGAATGTTGCTGCTACACT 58.923 45.455 18.52 8.56 0.00 3.55
276 277 3.503748 GGAAGAATGTTGCTGCTACACTT 59.496 43.478 18.52 16.96 0.00 3.16
277 278 4.470462 GAAGAATGTTGCTGCTACACTTG 58.530 43.478 18.52 0.00 0.00 3.16
278 279 3.480470 AGAATGTTGCTGCTACACTTGT 58.520 40.909 18.52 10.10 0.00 3.16
279 280 4.641396 AGAATGTTGCTGCTACACTTGTA 58.359 39.130 18.52 0.00 0.00 2.41
280 281 5.248640 AGAATGTTGCTGCTACACTTGTAT 58.751 37.500 18.52 0.00 0.00 2.29
281 282 6.406370 AGAATGTTGCTGCTACACTTGTATA 58.594 36.000 18.52 0.00 0.00 1.47
282 283 7.050377 AGAATGTTGCTGCTACACTTGTATAT 58.950 34.615 18.52 0.00 0.00 0.86
283 284 6.851222 ATGTTGCTGCTACACTTGTATATC 57.149 37.500 18.52 0.00 0.00 1.63
284 285 5.729510 TGTTGCTGCTACACTTGTATATCA 58.270 37.500 12.74 0.00 0.00 2.15
285 286 5.812127 TGTTGCTGCTACACTTGTATATCAG 59.188 40.000 12.74 8.14 0.00 2.90
286 287 5.598416 TGCTGCTACACTTGTATATCAGT 57.402 39.130 0.00 0.00 31.25 3.41
287 288 6.709018 TGCTGCTACACTTGTATATCAGTA 57.291 37.500 0.00 7.29 31.25 2.74
288 289 6.739112 TGCTGCTACACTTGTATATCAGTAG 58.261 40.000 0.00 0.00 33.82 2.57
291 292 4.617645 GCTACACTTGTATATCAGTAGCGC 59.382 45.833 0.00 0.00 43.09 5.92
292 293 3.629058 ACACTTGTATATCAGTAGCGCG 58.371 45.455 0.00 0.00 0.00 6.86
293 294 2.980476 CACTTGTATATCAGTAGCGCGG 59.020 50.000 8.83 0.00 0.00 6.46
294 295 2.030185 ACTTGTATATCAGTAGCGCGGG 60.030 50.000 8.83 0.00 0.00 6.13
295 296 0.242825 TGTATATCAGTAGCGCGGGC 59.757 55.000 17.92 17.92 40.37 6.13
296 297 0.797249 GTATATCAGTAGCGCGGGCG 60.797 60.000 19.46 8.99 46.35 6.13
314 315 4.139420 CGCACGCACTGCTGCTAC 62.139 66.667 17.69 0.00 44.64 3.58
315 316 4.139420 GCACGCACTGCTGCTACG 62.139 66.667 14.56 1.97 43.33 3.51
316 317 3.481903 CACGCACTGCTGCTACGG 61.482 66.667 0.00 0.00 41.77 4.02
317 318 4.742201 ACGCACTGCTGCTACGGG 62.742 66.667 0.00 0.00 41.77 5.28
318 319 4.742201 CGCACTGCTGCTACGGGT 62.742 66.667 0.00 0.00 41.77 5.28
319 320 2.358737 GCACTGCTGCTACGGGTT 60.359 61.111 0.00 0.00 40.63 4.11
320 321 1.079405 GCACTGCTGCTACGGGTTA 60.079 57.895 0.00 0.00 40.63 2.85
321 322 1.084370 GCACTGCTGCTACGGGTTAG 61.084 60.000 0.00 0.00 40.63 2.34
342 343 2.987821 GCTGTAGCGCCTTATTAGTAGC 59.012 50.000 2.29 0.00 0.00 3.58
346 347 2.431539 CGCCTTATTAGTAGCGCCG 58.568 57.895 2.29 0.00 42.31 6.46
347 348 1.615107 CGCCTTATTAGTAGCGCCGC 61.615 60.000 2.29 0.00 42.31 6.53
348 349 1.289800 GCCTTATTAGTAGCGCCGCC 61.290 60.000 4.98 0.00 0.00 6.13
349 350 0.317479 CCTTATTAGTAGCGCCGCCT 59.683 55.000 4.98 0.00 0.00 5.52
350 351 1.669211 CCTTATTAGTAGCGCCGCCTC 60.669 57.143 4.98 0.00 0.00 4.70
351 352 0.316204 TTATTAGTAGCGCCGCCTCC 59.684 55.000 4.98 0.00 0.00 4.30
352 353 1.530013 TATTAGTAGCGCCGCCTCCC 61.530 60.000 4.98 0.00 0.00 4.30
363 364 3.917760 GCCTCCCGCGCTACTGAT 61.918 66.667 5.56 0.00 0.00 2.90
364 365 2.561956 GCCTCCCGCGCTACTGATA 61.562 63.158 5.56 0.00 0.00 2.15
365 366 1.878656 GCCTCCCGCGCTACTGATAT 61.879 60.000 5.56 0.00 0.00 1.63
366 367 1.460504 CCTCCCGCGCTACTGATATA 58.539 55.000 5.56 0.00 0.00 0.86
367 368 1.132643 CCTCCCGCGCTACTGATATAC 59.867 57.143 5.56 0.00 0.00 1.47
368 369 1.132643 CTCCCGCGCTACTGATATACC 59.867 57.143 5.56 0.00 0.00 2.73
369 370 1.174783 CCCGCGCTACTGATATACCT 58.825 55.000 5.56 0.00 0.00 3.08
370 371 2.026915 TCCCGCGCTACTGATATACCTA 60.027 50.000 5.56 0.00 0.00 3.08
371 372 2.355132 CCCGCGCTACTGATATACCTAG 59.645 54.545 5.56 0.00 0.00 3.02
372 373 3.268330 CCGCGCTACTGATATACCTAGA 58.732 50.000 5.56 0.00 0.00 2.43
373 374 3.688185 CCGCGCTACTGATATACCTAGAA 59.312 47.826 5.56 0.00 0.00 2.10
374 375 4.437121 CCGCGCTACTGATATACCTAGAAC 60.437 50.000 5.56 0.00 0.00 3.01
375 376 4.437121 CGCGCTACTGATATACCTAGAACC 60.437 50.000 5.56 0.00 0.00 3.62
376 377 4.142425 GCGCTACTGATATACCTAGAACCC 60.142 50.000 0.00 0.00 0.00 4.11
377 378 4.094590 CGCTACTGATATACCTAGAACCCG 59.905 50.000 0.00 0.00 0.00 5.28
378 379 5.008980 GCTACTGATATACCTAGAACCCGT 58.991 45.833 0.00 0.00 0.00 5.28
379 380 5.106237 GCTACTGATATACCTAGAACCCGTG 60.106 48.000 0.00 0.00 0.00 4.94
380 381 4.801164 ACTGATATACCTAGAACCCGTGT 58.199 43.478 0.00 0.00 0.00 4.49
381 382 5.206587 ACTGATATACCTAGAACCCGTGTT 58.793 41.667 0.00 0.00 37.42 3.32
382 383 5.068723 ACTGATATACCTAGAACCCGTGTTG 59.931 44.000 0.00 0.00 33.97 3.33
383 384 2.685850 ATACCTAGAACCCGTGTTGC 57.314 50.000 0.00 0.00 33.97 4.17
384 385 1.636148 TACCTAGAACCCGTGTTGCT 58.364 50.000 0.00 0.00 33.97 3.91
385 386 0.034896 ACCTAGAACCCGTGTTGCTG 59.965 55.000 0.00 0.00 33.97 4.41
386 387 1.298859 CCTAGAACCCGTGTTGCTGC 61.299 60.000 0.00 0.00 33.97 5.25
387 388 0.320771 CTAGAACCCGTGTTGCTGCT 60.321 55.000 0.00 0.00 33.97 4.24
388 389 0.970640 TAGAACCCGTGTTGCTGCTA 59.029 50.000 0.00 0.00 33.97 3.49
389 390 0.320771 AGAACCCGTGTTGCTGCTAG 60.321 55.000 0.00 0.00 33.97 3.42
390 391 1.298859 GAACCCGTGTTGCTGCTAGG 61.299 60.000 0.00 0.00 33.97 3.02
391 392 3.127533 CCCGTGTTGCTGCTAGGC 61.128 66.667 0.00 0.00 0.00 3.93
392 393 2.046892 CCGTGTTGCTGCTAGGCT 60.047 61.111 0.00 0.00 0.00 4.58
393 394 1.672356 CCGTGTTGCTGCTAGGCTT 60.672 57.895 0.00 0.00 0.00 4.35
394 395 1.237285 CCGTGTTGCTGCTAGGCTTT 61.237 55.000 0.00 0.00 0.00 3.51
395 396 0.593128 CGTGTTGCTGCTAGGCTTTT 59.407 50.000 0.00 0.00 0.00 2.27
396 397 1.001378 CGTGTTGCTGCTAGGCTTTTT 60.001 47.619 0.00 0.00 0.00 1.94
397 398 2.666026 GTGTTGCTGCTAGGCTTTTTC 58.334 47.619 0.00 0.00 0.00 2.29
398 399 1.613437 TGTTGCTGCTAGGCTTTTTCC 59.387 47.619 0.00 0.00 0.00 3.13
399 400 1.889170 GTTGCTGCTAGGCTTTTTCCT 59.111 47.619 0.00 0.00 40.21 3.36
400 401 3.081804 GTTGCTGCTAGGCTTTTTCCTA 58.918 45.455 0.00 0.00 37.66 2.94
401 402 2.711542 TGCTGCTAGGCTTTTTCCTAC 58.288 47.619 0.00 0.00 37.66 3.18
402 403 2.305927 TGCTGCTAGGCTTTTTCCTACT 59.694 45.455 0.00 0.00 37.66 2.57
403 404 3.517901 TGCTGCTAGGCTTTTTCCTACTA 59.482 43.478 0.00 0.00 37.66 1.82
404 405 4.123506 GCTGCTAGGCTTTTTCCTACTAG 58.876 47.826 0.00 0.00 37.66 2.57
405 406 4.383226 GCTGCTAGGCTTTTTCCTACTAGT 60.383 45.833 0.00 0.00 37.66 2.57
406 407 5.086104 TGCTAGGCTTTTTCCTACTAGTG 57.914 43.478 5.39 0.00 37.66 2.74
407 408 4.530946 TGCTAGGCTTTTTCCTACTAGTGT 59.469 41.667 5.39 0.00 37.66 3.55
408 409 5.718130 TGCTAGGCTTTTTCCTACTAGTGTA 59.282 40.000 5.39 0.00 37.66 2.90
409 410 6.383147 TGCTAGGCTTTTTCCTACTAGTGTAT 59.617 38.462 5.39 0.00 37.66 2.29
410 411 7.562454 TGCTAGGCTTTTTCCTACTAGTGTATA 59.438 37.037 5.39 0.00 37.66 1.47
453 454 8.717821 CCAAACATTCGAAAAGATACTAGAACA 58.282 33.333 0.00 0.00 0.00 3.18
545 1742 1.269723 GTCATGATCATACTCGGCGGA 59.730 52.381 8.15 0.00 0.00 5.54
756 1954 8.410912 TCCTTTTTCTAGTTAACTGCTTTTTCC 58.589 33.333 18.56 0.00 0.00 3.13
757 1960 7.652105 CCTTTTTCTAGTTAACTGCTTTTTCCC 59.348 37.037 18.56 0.00 0.00 3.97
777 1980 3.118075 CCCTTTTTGTTTGATGGGGTTGT 60.118 43.478 0.00 0.00 0.00 3.32
803 2006 7.878127 TCAGACTGTCTAAAGGGACTAAATTTG 59.122 37.037 10.47 0.00 38.49 2.32
853 2327 5.427036 TGTCCGGTTTTTAAGCTTACAAG 57.573 39.130 5.45 0.00 0.00 3.16
935 2492 4.751098 ACGGAGTACTCTAGAAGATTAGCG 59.249 45.833 21.88 14.00 41.94 4.26
968 2525 4.520874 TGAAACTTTGGTGACAGTTGACAA 59.479 37.500 0.00 0.00 44.54 3.18
1022 2581 1.113788 CAGAGGAAGCAGAGAGGAGG 58.886 60.000 0.00 0.00 0.00 4.30
1030 2593 0.679002 GCAGAGAGGAGGCAATTGCA 60.679 55.000 30.32 0.00 44.36 4.08
1031 2594 1.830279 CAGAGAGGAGGCAATTGCAA 58.170 50.000 30.32 0.00 44.36 4.08
1032 2595 1.743958 CAGAGAGGAGGCAATTGCAAG 59.256 52.381 30.32 6.35 44.36 4.01
1033 2596 1.101331 GAGAGGAGGCAATTGCAAGG 58.899 55.000 30.32 0.34 44.36 3.61
1251 2832 1.573108 TCTTCCAAGAATCGCCCTCT 58.427 50.000 0.00 0.00 30.73 3.69
1467 3048 1.729470 CCAGGCTCTACTCGCGTGAT 61.729 60.000 16.04 1.96 43.71 3.06
1687 3994 8.350722 AGTATCTGATGATTGCATGATTTTCAC 58.649 33.333 0.00 0.00 34.11 3.18
1688 3995 5.898174 TCTGATGATTGCATGATTTTCACC 58.102 37.500 0.00 0.00 34.11 4.02
1727 4035 5.048713 GGAACCACCTTCACAGTTTCTATTG 60.049 44.000 0.00 0.00 35.41 1.90
1935 4613 9.408648 TCCTTCCATTCCAAAATATAAGTCTTC 57.591 33.333 0.00 0.00 0.00 2.87
2012 4690 5.700722 AAAGTGCGTCTATATACATCCGA 57.299 39.130 0.00 0.00 0.00 4.55
2137 5302 9.897744 CTATTGAAAACATGTCAAGAGCTAAAA 57.102 29.630 0.00 0.00 37.47 1.52
2512 5695 1.337384 CCTCCATGATGACCGGTGGA 61.337 60.000 14.63 10.91 38.37 4.02
2608 5791 6.550938 ACTGTGATACATCTGATCCTGAAA 57.449 37.500 0.00 0.00 0.00 2.69
2683 6287 4.367450 TGTTAAAACAATGTTCAGCTGGC 58.633 39.130 15.13 8.06 35.67 4.85
2909 6513 2.389962 TCGGGTTAGATGGGAAAACG 57.610 50.000 0.00 0.00 0.00 3.60
2972 6586 7.982354 AGTTTATGTCCTACTTGTCTAATGCTC 59.018 37.037 0.00 0.00 0.00 4.26
3051 6669 9.639563 TGTCAAAAATGCTCTTATATTATGGGA 57.360 29.630 0.00 0.00 0.00 4.37
3101 6719 3.326588 TGGTCTTATTGTGCACTGGTACT 59.673 43.478 19.41 0.00 0.00 2.73
3131 6757 6.974622 CAGAACAAGCACACTACAAAATCTTT 59.025 34.615 0.00 0.00 0.00 2.52
3262 6895 2.763710 TCAGGCTAGCGGGCATCA 60.764 61.111 9.00 0.00 43.56 3.07
3275 6908 2.736400 CGGGCATCAAATTCTTTCCTGC 60.736 50.000 0.00 0.00 0.00 4.85
3317 6951 4.034279 CCATTTTGGTTTGTGCTGTTTGAG 59.966 41.667 0.00 0.00 31.35 3.02
3345 6985 1.200948 GTGCCCAAACTGCTCAATCTC 59.799 52.381 0.00 0.00 0.00 2.75
3351 6991 2.486472 AACTGCTCAATCTCCACCTG 57.514 50.000 0.00 0.00 0.00 4.00
3416 7058 0.980423 GAGAGGTCTTGCTGGGAAGT 59.020 55.000 2.09 0.00 0.00 3.01
3443 8398 8.421784 CAATCCTAGTCAGTTAGTTAGGCAATA 58.578 37.037 0.00 0.00 34.08 1.90
3454 8409 5.916661 AGTTAGGCAATAGTTCGAAGAGA 57.083 39.130 0.00 0.00 38.43 3.10
3596 8551 2.092968 TCTTCTGGCGCATCAAACCTAT 60.093 45.455 10.83 0.00 0.00 2.57
3781 8737 1.198094 TCCTTGGATCAGTGGCGGAA 61.198 55.000 0.00 0.00 0.00 4.30
3819 8776 5.710409 TCTCTAACCAATCCCCTAAAAGG 57.290 43.478 0.00 0.00 34.30 3.11
3831 8788 4.080526 TCCCCTAAAAGGTGTAAGAGCATC 60.081 45.833 0.00 0.00 31.93 3.91
3834 8791 6.183361 CCCCTAAAAGGTGTAAGAGCATCTAT 60.183 42.308 0.00 0.00 38.07 1.98
3835 8792 7.016268 CCCCTAAAAGGTGTAAGAGCATCTATA 59.984 40.741 0.00 0.00 38.07 1.31
3836 8793 8.598041 CCCTAAAAGGTGTAAGAGCATCTATAT 58.402 37.037 0.00 0.00 38.07 0.86
3848 8805 5.773575 GAGCATCTATATTCGGACTTCACA 58.226 41.667 0.00 0.00 0.00 3.58
3849 8806 6.161855 AGCATCTATATTCGGACTTCACAA 57.838 37.500 0.00 0.00 0.00 3.33
3850 8807 6.582636 AGCATCTATATTCGGACTTCACAAA 58.417 36.000 0.00 0.00 0.00 2.83
3851 8808 6.480320 AGCATCTATATTCGGACTTCACAAAC 59.520 38.462 0.00 0.00 0.00 2.93
3852 8809 6.480320 GCATCTATATTCGGACTTCACAAACT 59.520 38.462 0.00 0.00 0.00 2.66
3853 8810 7.011482 GCATCTATATTCGGACTTCACAAACTT 59.989 37.037 0.00 0.00 0.00 2.66
3854 8811 7.827819 TCTATATTCGGACTTCACAAACTTG 57.172 36.000 0.00 0.00 0.00 3.16
3855 8812 5.880054 ATATTCGGACTTCACAAACTTGG 57.120 39.130 0.00 0.00 0.00 3.61
3856 8813 2.702592 TCGGACTTCACAAACTTGGT 57.297 45.000 0.00 0.00 0.00 3.67
3857 8814 2.557317 TCGGACTTCACAAACTTGGTC 58.443 47.619 0.00 0.00 0.00 4.02
3858 8815 1.602377 CGGACTTCACAAACTTGGTCC 59.398 52.381 0.00 0.00 39.60 4.46
3859 8816 1.954382 GGACTTCACAAACTTGGTCCC 59.046 52.381 0.00 0.00 37.75 4.46
3860 8817 2.422945 GGACTTCACAAACTTGGTCCCT 60.423 50.000 0.00 0.00 37.75 4.20
3861 8818 2.618709 GACTTCACAAACTTGGTCCCTG 59.381 50.000 0.00 0.00 0.00 4.45
3862 8819 1.338020 CTTCACAAACTTGGTCCCTGC 59.662 52.381 0.00 0.00 0.00 4.85
3863 8820 0.817634 TCACAAACTTGGTCCCTGCG 60.818 55.000 0.00 0.00 0.00 5.18
3864 8821 1.528309 ACAAACTTGGTCCCTGCGG 60.528 57.895 0.00 0.00 0.00 5.69
3865 8822 1.228124 CAAACTTGGTCCCTGCGGA 60.228 57.895 0.00 0.00 35.01 5.54
3901 8858 4.129737 CGGACGCTGACCGGACAT 62.130 66.667 9.46 0.00 45.65 3.06
3902 8859 2.264794 GGACGCTGACCGGACATT 59.735 61.111 9.46 0.00 42.52 2.71
3903 8860 1.810030 GGACGCTGACCGGACATTC 60.810 63.158 9.46 5.09 42.52 2.67
3904 8861 1.810030 GACGCTGACCGGACATTCC 60.810 63.158 9.46 0.00 42.52 3.01
3905 8862 2.511600 CGCTGACCGGACATTCCC 60.512 66.667 9.46 0.00 31.13 3.97
3906 8863 2.990479 GCTGACCGGACATTCCCT 59.010 61.111 9.46 0.00 31.13 4.20
3907 8864 1.672854 CGCTGACCGGACATTCCCTA 61.673 60.000 9.46 0.00 31.13 3.53
3908 8865 0.179081 GCTGACCGGACATTCCCTAC 60.179 60.000 9.46 0.00 31.13 3.18
3909 8866 1.191535 CTGACCGGACATTCCCTACA 58.808 55.000 9.46 0.00 31.13 2.74
3910 8867 1.762957 CTGACCGGACATTCCCTACAT 59.237 52.381 9.46 0.00 31.13 2.29
3911 8868 1.760613 TGACCGGACATTCCCTACATC 59.239 52.381 9.46 0.00 31.13 3.06
3912 8869 1.070289 GACCGGACATTCCCTACATCC 59.930 57.143 9.46 0.00 31.13 3.51
3913 8870 3.588277 CGGACATTCCCTACATCCG 57.412 57.895 0.00 0.00 45.61 4.18
3914 8871 0.600255 CGGACATTCCCTACATCCGC 60.600 60.000 0.00 0.00 45.13 5.54
3915 8872 0.600255 GGACATTCCCTACATCCGCG 60.600 60.000 0.00 0.00 0.00 6.46
3916 8873 1.222115 GACATTCCCTACATCCGCGC 61.222 60.000 0.00 0.00 0.00 6.86
3917 8874 1.961277 CATTCCCTACATCCGCGCC 60.961 63.158 0.00 0.00 0.00 6.53
3918 8875 2.140792 ATTCCCTACATCCGCGCCT 61.141 57.895 0.00 0.00 0.00 5.52
3919 8876 2.100879 ATTCCCTACATCCGCGCCTC 62.101 60.000 0.00 0.00 0.00 4.70
3920 8877 4.301027 CCCTACATCCGCGCCTCC 62.301 72.222 0.00 0.00 0.00 4.30
3921 8878 3.536917 CCTACATCCGCGCCTCCA 61.537 66.667 0.00 0.00 0.00 3.86
3922 8879 2.279517 CTACATCCGCGCCTCCAC 60.280 66.667 0.00 0.00 0.00 4.02
3923 8880 3.071837 TACATCCGCGCCTCCACA 61.072 61.111 0.00 0.00 0.00 4.17
3924 8881 3.365291 TACATCCGCGCCTCCACAC 62.365 63.158 0.00 0.00 0.00 3.82
3933 8890 2.954868 CCTCCACACGCGCGTATC 60.955 66.667 37.24 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 9.908152 CGAGACCACAAATGTAATCATAGTATA 57.092 33.333 0.00 0.00 33.49 1.47
18 19 7.385205 GCGAGACCACAAATGTAATCATAGTAT 59.615 37.037 0.00 0.00 33.49 2.12
19 20 6.700081 GCGAGACCACAAATGTAATCATAGTA 59.300 38.462 0.00 0.00 33.49 1.82
20 21 5.523916 GCGAGACCACAAATGTAATCATAGT 59.476 40.000 0.00 0.00 33.49 2.12
21 22 5.523552 TGCGAGACCACAAATGTAATCATAG 59.476 40.000 0.00 0.00 33.49 2.23
22 23 5.423886 TGCGAGACCACAAATGTAATCATA 58.576 37.500 0.00 0.00 33.49 2.15
23 24 4.260985 TGCGAGACCACAAATGTAATCAT 58.739 39.130 0.00 0.00 35.59 2.45
24 25 3.669536 TGCGAGACCACAAATGTAATCA 58.330 40.909 0.00 0.00 0.00 2.57
25 26 3.063997 CCTGCGAGACCACAAATGTAATC 59.936 47.826 0.00 0.00 0.00 1.75
26 27 3.009723 CCTGCGAGACCACAAATGTAAT 58.990 45.455 0.00 0.00 0.00 1.89
27 28 2.422597 CCTGCGAGACCACAAATGTAA 58.577 47.619 0.00 0.00 0.00 2.41
28 29 1.943968 GCCTGCGAGACCACAAATGTA 60.944 52.381 0.00 0.00 0.00 2.29
29 30 1.237285 GCCTGCGAGACCACAAATGT 61.237 55.000 0.00 0.00 0.00 2.71
30 31 1.236616 TGCCTGCGAGACCACAAATG 61.237 55.000 0.00 0.00 0.00 2.32
31 32 0.322816 ATGCCTGCGAGACCACAAAT 60.323 50.000 0.00 0.00 0.00 2.32
32 33 0.537143 AATGCCTGCGAGACCACAAA 60.537 50.000 0.00 0.00 0.00 2.83
33 34 0.537143 AAATGCCTGCGAGACCACAA 60.537 50.000 0.00 0.00 0.00 3.33
34 35 1.073025 AAATGCCTGCGAGACCACA 59.927 52.632 0.00 0.00 0.00 4.17
35 36 1.237285 ACAAATGCCTGCGAGACCAC 61.237 55.000 0.00 0.00 0.00 4.16
36 37 0.323302 TACAAATGCCTGCGAGACCA 59.677 50.000 0.00 0.00 0.00 4.02
37 38 1.331756 CATACAAATGCCTGCGAGACC 59.668 52.381 0.00 0.00 0.00 3.85
38 39 2.009774 ACATACAAATGCCTGCGAGAC 58.990 47.619 0.00 0.00 36.50 3.36
39 40 2.009051 CACATACAAATGCCTGCGAGA 58.991 47.619 0.00 0.00 36.50 4.04
40 41 1.739466 ACACATACAAATGCCTGCGAG 59.261 47.619 0.00 0.00 36.50 5.03
41 42 1.819928 ACACATACAAATGCCTGCGA 58.180 45.000 0.00 0.00 36.50 5.10
42 43 3.312146 TGATACACATACAAATGCCTGCG 59.688 43.478 0.00 0.00 36.50 5.18
43 44 4.898829 TGATACACATACAAATGCCTGC 57.101 40.909 0.00 0.00 36.50 4.85
44 45 6.622833 TCATGATACACATACAAATGCCTG 57.377 37.500 0.00 0.00 37.46 4.85
45 46 6.999871 TCATCATGATACACATACAAATGCCT 59.000 34.615 8.15 0.00 37.46 4.75
46 47 7.080099 GTCATCATGATACACATACAAATGCC 58.920 38.462 8.15 0.00 37.46 4.40
47 48 7.641760 TGTCATCATGATACACATACAAATGC 58.358 34.615 8.15 0.00 37.46 3.56
51 52 9.176460 ACAAATGTCATCATGATACACATACAA 57.824 29.630 23.39 5.20 37.46 2.41
52 53 8.735692 ACAAATGTCATCATGATACACATACA 57.264 30.769 23.39 14.83 37.46 2.29
55 56 9.346005 ACATACAAATGTCATCATGATACACAT 57.654 29.630 19.85 19.85 42.92 3.21
56 57 8.614346 CACATACAAATGTCATCATGATACACA 58.386 33.333 17.70 17.70 44.70 3.72
57 58 7.588854 GCACATACAAATGTCATCATGATACAC 59.411 37.037 8.15 8.80 44.70 2.90
58 59 7.499895 AGCACATACAAATGTCATCATGATACA 59.500 33.333 8.15 13.02 44.70 2.29
59 60 7.868775 AGCACATACAAATGTCATCATGATAC 58.131 34.615 8.15 7.94 44.70 2.24
60 61 9.558396 TTAGCACATACAAATGTCATCATGATA 57.442 29.630 8.15 0.00 44.70 2.15
61 62 6.954487 AGCACATACAAATGTCATCATGAT 57.046 33.333 1.18 1.18 44.70 2.45
62 63 7.862512 TTAGCACATACAAATGTCATCATGA 57.137 32.000 0.00 0.00 44.70 3.07
63 64 8.400186 TCTTTAGCACATACAAATGTCATCATG 58.600 33.333 0.00 0.00 44.70 3.07
64 65 8.510243 TCTTTAGCACATACAAATGTCATCAT 57.490 30.769 0.00 0.00 44.70 2.45
65 66 7.920160 TCTTTAGCACATACAAATGTCATCA 57.080 32.000 0.00 0.00 44.70 3.07
66 67 9.443283 GAATCTTTAGCACATACAAATGTCATC 57.557 33.333 0.00 0.00 44.70 2.92
67 68 9.182214 AGAATCTTTAGCACATACAAATGTCAT 57.818 29.630 0.00 0.00 44.70 3.06
68 69 8.565896 AGAATCTTTAGCACATACAAATGTCA 57.434 30.769 0.00 0.00 44.70 3.58
69 70 9.495754 GAAGAATCTTTAGCACATACAAATGTC 57.504 33.333 0.00 0.00 44.70 3.06
70 71 9.236006 AGAAGAATCTTTAGCACATACAAATGT 57.764 29.630 0.00 0.00 38.76 2.71
78 79 9.061435 GGCTTTATAGAAGAATCTTTAGCACAT 57.939 33.333 0.00 0.00 37.10 3.21
79 80 8.267894 AGGCTTTATAGAAGAATCTTTAGCACA 58.732 33.333 0.00 0.00 37.10 4.57
80 81 8.555361 CAGGCTTTATAGAAGAATCTTTAGCAC 58.445 37.037 0.00 0.00 37.10 4.40
81 82 8.267894 ACAGGCTTTATAGAAGAATCTTTAGCA 58.732 33.333 0.00 0.00 37.10 3.49
82 83 8.669946 ACAGGCTTTATAGAAGAATCTTTAGC 57.330 34.615 0.00 0.72 37.10 3.09
85 86 9.520515 TTGAACAGGCTTTATAGAAGAATCTTT 57.479 29.630 0.00 0.00 37.10 2.52
86 87 9.520515 TTTGAACAGGCTTTATAGAAGAATCTT 57.479 29.630 0.00 0.00 37.10 2.40
87 88 9.692325 ATTTGAACAGGCTTTATAGAAGAATCT 57.308 29.630 0.00 0.00 39.82 2.40
90 91 9.733556 TGTATTTGAACAGGCTTTATAGAAGAA 57.266 29.630 0.00 0.00 0.00 2.52
91 92 9.733556 TTGTATTTGAACAGGCTTTATAGAAGA 57.266 29.630 0.00 0.00 0.00 2.87
95 96 9.906660 TGTTTTGTATTTGAACAGGCTTTATAG 57.093 29.630 0.00 0.00 0.00 1.31
97 98 9.606631 TTTGTTTTGTATTTGAACAGGCTTTAT 57.393 25.926 0.00 0.00 35.04 1.40
98 99 9.606631 ATTTGTTTTGTATTTGAACAGGCTTTA 57.393 25.926 0.00 0.00 35.04 1.85
99 100 7.913674 TTTGTTTTGTATTTGAACAGGCTTT 57.086 28.000 0.00 0.00 35.04 3.51
100 101 9.777297 ATATTTGTTTTGTATTTGAACAGGCTT 57.223 25.926 0.00 0.00 35.04 4.35
101 102 9.206870 CATATTTGTTTTGTATTTGAACAGGCT 57.793 29.630 0.00 0.00 35.04 4.58
102 103 7.956943 GCATATTTGTTTTGTATTTGAACAGGC 59.043 33.333 0.00 0.00 35.04 4.85
103 104 8.986847 TGCATATTTGTTTTGTATTTGAACAGG 58.013 29.630 0.00 0.00 35.04 4.00
105 106 9.755804 TCTGCATATTTGTTTTGTATTTGAACA 57.244 25.926 0.00 0.00 0.00 3.18
108 109 9.755804 TGTTCTGCATATTTGTTTTGTATTTGA 57.244 25.926 0.00 0.00 0.00 2.69
143 144 9.379791 ACTCGCTACTGCTAATTTTAATAGTTT 57.620 29.630 0.00 0.00 36.97 2.66
144 145 8.818057 CACTCGCTACTGCTAATTTTAATAGTT 58.182 33.333 0.00 0.00 36.97 2.24
145 146 7.438459 CCACTCGCTACTGCTAATTTTAATAGT 59.562 37.037 0.00 0.00 36.97 2.12
146 147 7.652105 TCCACTCGCTACTGCTAATTTTAATAG 59.348 37.037 0.00 0.00 36.97 1.73
147 148 7.494211 TCCACTCGCTACTGCTAATTTTAATA 58.506 34.615 0.00 0.00 36.97 0.98
148 149 6.346096 TCCACTCGCTACTGCTAATTTTAAT 58.654 36.000 0.00 0.00 36.97 1.40
149 150 5.726397 TCCACTCGCTACTGCTAATTTTAA 58.274 37.500 0.00 0.00 36.97 1.52
150 151 5.126545 TCTCCACTCGCTACTGCTAATTTTA 59.873 40.000 0.00 0.00 36.97 1.52
151 152 4.081642 TCTCCACTCGCTACTGCTAATTTT 60.082 41.667 0.00 0.00 36.97 1.82
152 153 3.447586 TCTCCACTCGCTACTGCTAATTT 59.552 43.478 0.00 0.00 36.97 1.82
153 154 3.024547 TCTCCACTCGCTACTGCTAATT 58.975 45.455 0.00 0.00 36.97 1.40
154 155 2.656002 TCTCCACTCGCTACTGCTAAT 58.344 47.619 0.00 0.00 36.97 1.73
155 156 2.124277 TCTCCACTCGCTACTGCTAA 57.876 50.000 0.00 0.00 36.97 3.09
156 157 2.124277 TTCTCCACTCGCTACTGCTA 57.876 50.000 0.00 0.00 36.97 3.49
157 158 1.257743 TTTCTCCACTCGCTACTGCT 58.742 50.000 0.00 0.00 36.97 4.24
158 159 1.996191 CTTTTCTCCACTCGCTACTGC 59.004 52.381 0.00 0.00 0.00 4.40
159 160 3.305398 ACTTTTCTCCACTCGCTACTG 57.695 47.619 0.00 0.00 0.00 2.74
160 161 4.618693 GCTAACTTTTCTCCACTCGCTACT 60.619 45.833 0.00 0.00 0.00 2.57
161 162 3.613299 GCTAACTTTTCTCCACTCGCTAC 59.387 47.826 0.00 0.00 0.00 3.58
162 163 3.257375 TGCTAACTTTTCTCCACTCGCTA 59.743 43.478 0.00 0.00 0.00 4.26
163 164 2.037251 TGCTAACTTTTCTCCACTCGCT 59.963 45.455 0.00 0.00 0.00 4.93
164 165 2.413453 CTGCTAACTTTTCTCCACTCGC 59.587 50.000 0.00 0.00 0.00 5.03
165 166 2.413453 GCTGCTAACTTTTCTCCACTCG 59.587 50.000 0.00 0.00 0.00 4.18
166 167 3.403038 TGCTGCTAACTTTTCTCCACTC 58.597 45.455 0.00 0.00 0.00 3.51
167 168 3.406764 CTGCTGCTAACTTTTCTCCACT 58.593 45.455 0.00 0.00 0.00 4.00
168 169 2.095516 GCTGCTGCTAACTTTTCTCCAC 60.096 50.000 8.53 0.00 36.03 4.02
169 170 2.154462 GCTGCTGCTAACTTTTCTCCA 58.846 47.619 8.53 0.00 36.03 3.86
170 171 1.129437 CGCTGCTGCTAACTTTTCTCC 59.871 52.381 14.03 0.00 36.97 3.71
171 172 1.464854 GCGCTGCTGCTAACTTTTCTC 60.465 52.381 14.03 0.00 36.97 2.87
172 173 0.519077 GCGCTGCTGCTAACTTTTCT 59.481 50.000 14.03 0.00 36.97 2.52
173 174 0.790866 CGCGCTGCTGCTAACTTTTC 60.791 55.000 14.03 0.00 36.97 2.29
174 175 1.207593 CGCGCTGCTGCTAACTTTT 59.792 52.632 14.03 0.00 36.97 2.27
175 176 1.021390 ATCGCGCTGCTGCTAACTTT 61.021 50.000 14.03 0.00 36.97 2.66
176 177 0.179111 TATCGCGCTGCTGCTAACTT 60.179 50.000 14.03 0.00 36.97 2.66
177 178 0.596083 CTATCGCGCTGCTGCTAACT 60.596 55.000 14.03 0.00 36.97 2.24
178 179 0.872021 ACTATCGCGCTGCTGCTAAC 60.872 55.000 14.03 2.33 36.97 2.34
179 180 0.666374 TACTATCGCGCTGCTGCTAA 59.334 50.000 14.03 0.00 36.97 3.09
180 181 0.238553 CTACTATCGCGCTGCTGCTA 59.761 55.000 14.03 4.51 36.97 3.49
181 182 1.007964 CTACTATCGCGCTGCTGCT 60.008 57.895 14.03 0.00 36.97 4.24
182 183 2.653022 GCTACTATCGCGCTGCTGC 61.653 63.158 5.56 5.34 0.00 5.25
183 184 1.274126 CTGCTACTATCGCGCTGCTG 61.274 60.000 5.56 0.00 0.00 4.41
184 185 1.007964 CTGCTACTATCGCGCTGCT 60.008 57.895 5.56 0.00 0.00 4.24
185 186 0.040336 TACTGCTACTATCGCGCTGC 60.040 55.000 5.56 0.00 0.00 5.25
186 187 1.957089 CTACTGCTACTATCGCGCTG 58.043 55.000 5.56 0.00 0.00 5.18
187 188 0.238817 GCTACTGCTACTATCGCGCT 59.761 55.000 5.56 0.00 36.03 5.92
188 189 1.060726 CGCTACTGCTACTATCGCGC 61.061 60.000 0.00 0.00 36.97 6.86
189 190 1.060726 GCGCTACTGCTACTATCGCG 61.061 60.000 0.00 0.00 41.74 5.87
190 191 1.060726 CGCGCTACTGCTACTATCGC 61.061 60.000 5.56 0.00 36.97 4.58
191 192 1.060726 GCGCGCTACTGCTACTATCG 61.061 60.000 26.67 0.00 36.97 2.92
192 193 0.040336 TGCGCGCTACTGCTACTATC 60.040 55.000 33.29 0.00 36.97 2.08
193 194 0.317938 GTGCGCGCTACTGCTACTAT 60.318 55.000 33.29 0.00 36.97 2.12
194 195 1.063649 GTGCGCGCTACTGCTACTA 59.936 57.895 33.29 4.14 36.97 1.82
195 196 2.202623 GTGCGCGCTACTGCTACT 60.203 61.111 33.29 0.00 36.97 2.57
196 197 2.014093 CTTGTGCGCGCTACTGCTAC 62.014 60.000 33.29 20.12 36.97 3.58
197 198 1.805539 CTTGTGCGCGCTACTGCTA 60.806 57.895 33.29 6.82 36.97 3.49
198 199 3.114616 CTTGTGCGCGCTACTGCT 61.115 61.111 33.29 0.00 36.97 4.24
199 200 3.076296 CTCTTGTGCGCGCTACTGC 62.076 63.158 33.29 16.62 0.00 4.40
200 201 1.008875 TTCTCTTGTGCGCGCTACTG 61.009 55.000 33.29 21.60 0.00 2.74
201 202 0.734253 CTTCTCTTGTGCGCGCTACT 60.734 55.000 33.29 0.00 0.00 2.57
202 203 1.704582 CTTCTCTTGTGCGCGCTAC 59.295 57.895 33.29 26.44 0.00 3.58
203 204 2.094659 GCTTCTCTTGTGCGCGCTA 61.095 57.895 33.29 18.69 0.00 4.26
204 205 3.418068 GCTTCTCTTGTGCGCGCT 61.418 61.111 33.29 0.00 0.00 5.92
205 206 4.783841 CGCTTCTCTTGTGCGCGC 62.784 66.667 27.26 27.26 43.08 6.86
209 210 1.424493 ATAGCGCGCTTCTCTTGTGC 61.424 55.000 41.04 0.17 39.33 4.57
210 211 1.783711 CTATAGCGCGCTTCTCTTGTG 59.216 52.381 41.04 16.28 0.00 3.33
211 212 1.866063 GCTATAGCGCGCTTCTCTTGT 60.866 52.381 41.04 15.41 0.00 3.16
212 213 0.781191 GCTATAGCGCGCTTCTCTTG 59.219 55.000 41.04 22.56 0.00 3.02
213 214 3.187211 GCTATAGCGCGCTTCTCTT 57.813 52.632 41.04 20.42 0.00 2.85
214 215 4.955089 GCTATAGCGCGCTTCTCT 57.045 55.556 41.04 22.78 0.00 3.10
221 222 5.304781 GCTACTGCTAATAGCTATAGCGCG 61.305 50.000 22.76 0.00 41.69 6.86
222 223 4.039032 GCTACTGCTAATAGCTATAGCGC 58.961 47.826 22.76 15.52 41.69 5.92
224 225 5.487153 TCGCTACTGCTAATAGCTATAGC 57.513 43.478 25.13 25.13 44.52 2.97
225 226 5.295787 AGCTCGCTACTGCTAATAGCTATAG 59.704 44.000 13.88 14.43 42.97 1.31
226 227 5.186942 AGCTCGCTACTGCTAATAGCTATA 58.813 41.667 13.88 5.05 42.97 1.31
227 228 4.013728 AGCTCGCTACTGCTAATAGCTAT 58.986 43.478 13.88 0.00 42.97 2.97
228 229 3.413327 AGCTCGCTACTGCTAATAGCTA 58.587 45.455 13.88 0.00 42.97 3.32
229 230 2.227865 GAGCTCGCTACTGCTAATAGCT 59.772 50.000 13.88 0.00 42.97 3.32
230 231 2.591133 GAGCTCGCTACTGCTAATAGC 58.409 52.381 5.12 5.12 42.82 2.97
231 232 2.554462 TGGAGCTCGCTACTGCTAATAG 59.446 50.000 7.83 0.00 39.91 1.73
232 233 2.293677 GTGGAGCTCGCTACTGCTAATA 59.706 50.000 7.83 0.00 39.91 0.98
233 234 1.067821 GTGGAGCTCGCTACTGCTAAT 59.932 52.381 7.83 0.00 39.91 1.73
234 235 0.456221 GTGGAGCTCGCTACTGCTAA 59.544 55.000 7.83 0.00 39.91 3.09
235 236 1.715862 CGTGGAGCTCGCTACTGCTA 61.716 60.000 7.83 0.00 39.91 3.49
236 237 2.888863 GTGGAGCTCGCTACTGCT 59.111 61.111 7.83 0.00 42.82 4.24
237 238 2.580867 CGTGGAGCTCGCTACTGC 60.581 66.667 7.83 0.00 0.00 4.40
238 239 1.934220 TTCCGTGGAGCTCGCTACTG 61.934 60.000 7.83 3.80 0.00 2.74
239 240 1.658686 CTTCCGTGGAGCTCGCTACT 61.659 60.000 7.83 0.00 0.00 2.57
240 241 1.226717 CTTCCGTGGAGCTCGCTAC 60.227 63.158 7.83 6.01 0.00 3.58
241 242 0.963856 TTCTTCCGTGGAGCTCGCTA 60.964 55.000 7.83 0.00 0.00 4.26
242 243 1.608717 ATTCTTCCGTGGAGCTCGCT 61.609 55.000 7.83 0.00 0.00 4.93
243 244 1.153549 ATTCTTCCGTGGAGCTCGC 60.154 57.895 7.83 2.06 0.00 5.03
244 245 0.108615 ACATTCTTCCGTGGAGCTCG 60.109 55.000 7.83 0.00 0.00 5.03
245 246 1.734465 CAACATTCTTCCGTGGAGCTC 59.266 52.381 4.71 4.71 0.00 4.09
246 247 1.813513 CAACATTCTTCCGTGGAGCT 58.186 50.000 0.00 0.00 0.00 4.09
247 248 0.169009 GCAACATTCTTCCGTGGAGC 59.831 55.000 0.00 0.00 0.00 4.70
248 249 1.466167 CAGCAACATTCTTCCGTGGAG 59.534 52.381 0.00 0.00 0.00 3.86
249 250 1.522668 CAGCAACATTCTTCCGTGGA 58.477 50.000 0.00 0.00 0.00 4.02
250 251 0.109597 GCAGCAACATTCTTCCGTGG 60.110 55.000 0.00 0.00 0.00 4.94
251 252 0.877071 AGCAGCAACATTCTTCCGTG 59.123 50.000 0.00 0.00 0.00 4.94
252 253 2.076863 GTAGCAGCAACATTCTTCCGT 58.923 47.619 0.00 0.00 0.00 4.69
253 254 2.076100 TGTAGCAGCAACATTCTTCCG 58.924 47.619 0.00 0.00 0.00 4.30
254 255 3.077359 AGTGTAGCAGCAACATTCTTCC 58.923 45.455 0.00 0.00 0.00 3.46
255 256 4.023707 ACAAGTGTAGCAGCAACATTCTTC 60.024 41.667 0.00 0.00 0.00 2.87
256 257 3.885297 ACAAGTGTAGCAGCAACATTCTT 59.115 39.130 0.00 0.00 0.00 2.52
257 258 3.480470 ACAAGTGTAGCAGCAACATTCT 58.520 40.909 0.00 0.00 0.00 2.40
258 259 3.904136 ACAAGTGTAGCAGCAACATTC 57.096 42.857 0.00 0.00 0.00 2.67
259 260 6.823182 TGATATACAAGTGTAGCAGCAACATT 59.177 34.615 0.00 0.00 33.52 2.71
260 261 6.348498 TGATATACAAGTGTAGCAGCAACAT 58.652 36.000 0.00 0.00 33.52 2.71
261 262 5.729510 TGATATACAAGTGTAGCAGCAACA 58.270 37.500 0.00 0.00 33.52 3.33
262 263 5.812642 ACTGATATACAAGTGTAGCAGCAAC 59.187 40.000 18.10 0.00 34.41 4.17
263 264 5.977635 ACTGATATACAAGTGTAGCAGCAA 58.022 37.500 18.10 0.00 34.41 3.91
264 265 5.598416 ACTGATATACAAGTGTAGCAGCA 57.402 39.130 18.10 5.86 34.41 4.41
265 266 5.631512 GCTACTGATATACAAGTGTAGCAGC 59.368 44.000 18.10 5.89 43.72 5.25
266 267 5.853810 CGCTACTGATATACAAGTGTAGCAG 59.146 44.000 17.03 17.03 44.09 4.24
267 268 5.758924 CGCTACTGATATACAAGTGTAGCA 58.241 41.667 18.63 6.78 44.09 3.49
268 269 4.617645 GCGCTACTGATATACAAGTGTAGC 59.382 45.833 0.00 11.48 42.30 3.58
269 270 4.846677 CGCGCTACTGATATACAAGTGTAG 59.153 45.833 5.56 0.00 33.52 2.74
270 271 4.319984 CCGCGCTACTGATATACAAGTGTA 60.320 45.833 5.56 0.00 34.67 2.90
271 272 3.550233 CCGCGCTACTGATATACAAGTGT 60.550 47.826 5.56 0.00 0.00 3.55
272 273 2.980476 CCGCGCTACTGATATACAAGTG 59.020 50.000 5.56 0.00 0.00 3.16
273 274 2.030185 CCCGCGCTACTGATATACAAGT 60.030 50.000 5.56 0.00 0.00 3.16
274 275 2.596452 CCCGCGCTACTGATATACAAG 58.404 52.381 5.56 0.00 0.00 3.16
275 276 1.336517 GCCCGCGCTACTGATATACAA 60.337 52.381 5.56 0.00 0.00 2.41
276 277 0.242825 GCCCGCGCTACTGATATACA 59.757 55.000 5.56 0.00 0.00 2.29
277 278 0.797249 CGCCCGCGCTACTGATATAC 60.797 60.000 5.56 0.00 0.00 1.47
278 279 1.504900 CGCCCGCGCTACTGATATA 59.495 57.895 5.56 0.00 0.00 0.86
279 280 2.258591 CGCCCGCGCTACTGATAT 59.741 61.111 5.56 0.00 0.00 1.63
303 304 3.050703 CTAACCCGTAGCAGCAGTG 57.949 57.895 0.00 0.00 0.00 3.66
311 312 0.594284 GCGCTACAGCTAACCCGTAG 60.594 60.000 0.00 4.25 39.32 3.51
312 313 1.434696 GCGCTACAGCTAACCCGTA 59.565 57.895 0.00 0.00 39.32 4.02
313 314 2.183555 GCGCTACAGCTAACCCGT 59.816 61.111 0.00 0.00 39.32 5.28
314 315 2.573609 AAGGCGCTACAGCTAACCCG 62.574 60.000 7.64 0.00 39.32 5.28
315 316 0.462789 TAAGGCGCTACAGCTAACCC 59.537 55.000 7.64 0.00 39.32 4.11
316 317 2.528041 ATAAGGCGCTACAGCTAACC 57.472 50.000 7.64 0.00 39.32 2.85
317 318 4.618965 ACTAATAAGGCGCTACAGCTAAC 58.381 43.478 7.64 0.00 39.32 2.34
318 319 4.931661 ACTAATAAGGCGCTACAGCTAA 57.068 40.909 7.64 0.00 39.32 3.09
319 320 4.082895 GCTACTAATAAGGCGCTACAGCTA 60.083 45.833 7.64 0.00 39.32 3.32
320 321 3.305471 GCTACTAATAAGGCGCTACAGCT 60.305 47.826 7.64 0.00 39.32 4.24
321 322 2.987821 GCTACTAATAAGGCGCTACAGC 59.012 50.000 7.64 0.00 37.78 4.40
322 323 3.235195 CGCTACTAATAAGGCGCTACAG 58.765 50.000 7.64 0.00 41.08 2.74
323 324 3.278367 CGCTACTAATAAGGCGCTACA 57.722 47.619 7.64 0.00 41.08 2.74
329 330 1.289800 GGCGGCGCTACTAATAAGGC 61.290 60.000 32.30 6.19 0.00 4.35
330 331 0.317479 AGGCGGCGCTACTAATAAGG 59.683 55.000 32.30 0.00 0.00 2.69
331 332 1.669211 GGAGGCGGCGCTACTAATAAG 60.669 57.143 32.30 0.00 0.00 1.73
332 333 0.316204 GGAGGCGGCGCTACTAATAA 59.684 55.000 32.30 0.00 0.00 1.40
333 334 1.530013 GGGAGGCGGCGCTACTAATA 61.530 60.000 32.30 0.00 0.00 0.98
334 335 2.735237 GGAGGCGGCGCTACTAAT 59.265 61.111 32.30 10.73 0.00 1.73
335 336 3.534056 GGGAGGCGGCGCTACTAA 61.534 66.667 32.30 0.00 0.00 2.24
346 347 1.878656 ATATCAGTAGCGCGGGAGGC 61.879 60.000 8.83 0.00 38.69 4.70
347 348 1.132643 GTATATCAGTAGCGCGGGAGG 59.867 57.143 8.83 0.00 0.00 4.30
348 349 1.132643 GGTATATCAGTAGCGCGGGAG 59.867 57.143 8.83 0.00 0.00 4.30
349 350 1.171308 GGTATATCAGTAGCGCGGGA 58.829 55.000 8.83 0.00 0.00 5.14
350 351 1.174783 AGGTATATCAGTAGCGCGGG 58.825 55.000 8.83 0.00 0.00 6.13
351 352 3.268330 TCTAGGTATATCAGTAGCGCGG 58.732 50.000 8.83 0.00 0.00 6.46
352 353 4.437121 GGTTCTAGGTATATCAGTAGCGCG 60.437 50.000 0.00 0.00 0.00 6.86
353 354 4.142425 GGGTTCTAGGTATATCAGTAGCGC 60.142 50.000 0.00 0.00 0.00 5.92
354 355 4.094590 CGGGTTCTAGGTATATCAGTAGCG 59.905 50.000 0.00 0.00 0.00 4.26
355 356 5.008980 ACGGGTTCTAGGTATATCAGTAGC 58.991 45.833 0.00 0.00 0.00 3.58
356 357 6.002704 ACACGGGTTCTAGGTATATCAGTAG 58.997 44.000 0.00 0.00 0.00 2.57
357 358 5.945310 ACACGGGTTCTAGGTATATCAGTA 58.055 41.667 0.00 0.00 0.00 2.74
358 359 4.801164 ACACGGGTTCTAGGTATATCAGT 58.199 43.478 0.00 0.00 0.00 3.41
359 360 5.529791 CAACACGGGTTCTAGGTATATCAG 58.470 45.833 0.00 0.00 34.21 2.90
360 361 4.202182 GCAACACGGGTTCTAGGTATATCA 60.202 45.833 0.00 0.00 34.21 2.15
361 362 4.038883 AGCAACACGGGTTCTAGGTATATC 59.961 45.833 0.00 0.00 34.21 1.63
362 363 3.965347 AGCAACACGGGTTCTAGGTATAT 59.035 43.478 0.00 0.00 34.21 0.86
363 364 3.131577 CAGCAACACGGGTTCTAGGTATA 59.868 47.826 0.00 0.00 34.21 1.47
364 365 2.093658 CAGCAACACGGGTTCTAGGTAT 60.094 50.000 0.00 0.00 34.21 2.73
365 366 1.274167 CAGCAACACGGGTTCTAGGTA 59.726 52.381 0.00 0.00 34.21 3.08
366 367 0.034896 CAGCAACACGGGTTCTAGGT 59.965 55.000 0.00 0.00 34.21 3.08
367 368 1.298859 GCAGCAACACGGGTTCTAGG 61.299 60.000 0.00 0.00 34.21 3.02
368 369 0.320771 AGCAGCAACACGGGTTCTAG 60.321 55.000 0.00 0.00 34.21 2.43
369 370 0.970640 TAGCAGCAACACGGGTTCTA 59.029 50.000 0.00 0.00 34.21 2.10
370 371 0.320771 CTAGCAGCAACACGGGTTCT 60.321 55.000 0.00 0.00 34.21 3.01
371 372 1.298859 CCTAGCAGCAACACGGGTTC 61.299 60.000 0.00 0.00 34.21 3.62
372 373 1.302511 CCTAGCAGCAACACGGGTT 60.303 57.895 0.00 0.00 37.87 4.11
373 374 2.347490 CCTAGCAGCAACACGGGT 59.653 61.111 0.00 0.00 0.00 5.28
374 375 3.127533 GCCTAGCAGCAACACGGG 61.128 66.667 0.00 0.00 0.00 5.28
375 376 1.237285 AAAGCCTAGCAGCAACACGG 61.237 55.000 0.00 0.00 34.23 4.94
376 377 0.593128 AAAAGCCTAGCAGCAACACG 59.407 50.000 0.00 0.00 34.23 4.49
377 378 2.608016 GGAAAAAGCCTAGCAGCAACAC 60.608 50.000 0.00 0.00 34.23 3.32
378 379 1.613437 GGAAAAAGCCTAGCAGCAACA 59.387 47.619 0.00 0.00 34.23 3.33
379 380 1.889170 AGGAAAAAGCCTAGCAGCAAC 59.111 47.619 0.00 0.00 36.22 4.17
380 381 2.292828 AGGAAAAAGCCTAGCAGCAA 57.707 45.000 0.00 0.00 36.22 3.91
381 382 2.305927 AGTAGGAAAAAGCCTAGCAGCA 59.694 45.455 0.00 0.00 41.05 4.41
382 383 2.992593 AGTAGGAAAAAGCCTAGCAGC 58.007 47.619 0.00 0.00 41.05 5.25
383 384 5.112686 CACTAGTAGGAAAAAGCCTAGCAG 58.887 45.833 1.45 0.00 41.05 4.24
384 385 4.530946 ACACTAGTAGGAAAAAGCCTAGCA 59.469 41.667 1.45 0.00 41.05 3.49
385 386 5.087391 ACACTAGTAGGAAAAAGCCTAGC 57.913 43.478 1.45 0.00 41.05 3.42
386 387 9.134055 AGTATACACTAGTAGGAAAAAGCCTAG 57.866 37.037 5.50 0.00 35.72 3.02
388 389 7.974730 AGTATACACTAGTAGGAAAAAGCCT 57.025 36.000 5.50 0.00 36.18 4.58
389 390 9.911138 GATAGTATACACTAGTAGGAAAAAGCC 57.089 37.037 5.50 0.00 40.57 4.35
390 391 9.911138 GGATAGTATACACTAGTAGGAAAAAGC 57.089 37.037 5.50 0.00 40.57 3.51
403 404 9.166222 TGGATGGTAATTTGGATAGTATACACT 57.834 33.333 5.50 0.00 38.91 3.55
404 405 9.787435 TTGGATGGTAATTTGGATAGTATACAC 57.213 33.333 5.50 0.00 0.00 2.90
408 409 9.881773 ATGTTTGGATGGTAATTTGGATAGTAT 57.118 29.630 0.00 0.00 0.00 2.12
409 410 9.707957 AATGTTTGGATGGTAATTTGGATAGTA 57.292 29.630 0.00 0.00 0.00 1.82
410 411 8.608185 AATGTTTGGATGGTAATTTGGATAGT 57.392 30.769 0.00 0.00 0.00 2.12
460 461 9.638239 ACACGCAATTTATGTGAATTTATTTCT 57.362 25.926 8.11 0.00 42.32 2.52
463 464 9.847706 TGTACACGCAATTTATGTGAATTTATT 57.152 25.926 8.11 0.00 42.32 1.40
464 465 9.502145 CTGTACACGCAATTTATGTGAATTTAT 57.498 29.630 8.11 0.00 42.32 1.40
545 1742 4.855340 ACCACATTCACGGAAAATCCTAT 58.145 39.130 0.00 0.00 33.30 2.57
630 1827 3.680786 GGCTTTGGGACCGGCAAC 61.681 66.667 0.00 0.00 0.00 4.17
691 1888 5.531659 TGAAAAAGGCATGAATGTTTGCAAT 59.468 32.000 0.00 0.00 40.66 3.56
693 1890 4.449131 TGAAAAAGGCATGAATGTTTGCA 58.551 34.783 0.00 0.00 40.66 4.08
699 1896 8.945481 TGGTAATATTGAAAAAGGCATGAATG 57.055 30.769 0.00 0.00 0.00 2.67
739 1937 7.842982 ACAAAAAGGGAAAAAGCAGTTAACTA 58.157 30.769 8.04 0.00 0.00 2.24
742 1940 7.661847 TCAAACAAAAAGGGAAAAAGCAGTTAA 59.338 29.630 0.00 0.00 0.00 2.01
747 1945 5.356470 CCATCAAACAAAAAGGGAAAAAGCA 59.644 36.000 0.00 0.00 0.00 3.91
749 1947 5.299028 CCCCATCAAACAAAAAGGGAAAAAG 59.701 40.000 0.00 0.00 38.60 2.27
756 1954 4.126437 GACAACCCCATCAAACAAAAAGG 58.874 43.478 0.00 0.00 0.00 3.11
757 1960 4.764172 TGACAACCCCATCAAACAAAAAG 58.236 39.130 0.00 0.00 0.00 2.27
777 1980 7.554959 AATTTAGTCCCTTTAGACAGTCTGA 57.445 36.000 13.84 1.42 39.34 3.27
803 2006 8.603242 TCAGAGACTAGACATTAAAACCAAAC 57.397 34.615 0.00 0.00 0.00 2.93
818 2290 4.457834 AACCGGACAAATCAGAGACTAG 57.542 45.455 9.46 0.00 0.00 2.57
819 2291 4.884668 AAACCGGACAAATCAGAGACTA 57.115 40.909 9.46 0.00 0.00 2.59
935 2492 6.156519 GTCACCAAAGTTTCAAATATGGACC 58.843 40.000 5.97 0.00 0.00 4.46
987 2546 6.264067 GCTTCCTCTGCATTTATACTGGAAAT 59.736 38.462 0.00 0.00 32.83 2.17
988 2547 5.590259 GCTTCCTCTGCATTTATACTGGAAA 59.410 40.000 0.00 0.00 32.83 3.13
989 2548 5.126067 GCTTCCTCTGCATTTATACTGGAA 58.874 41.667 0.00 0.00 0.00 3.53
1022 2581 1.135721 GGATGGTCTCCTTGCAATTGC 59.864 52.381 23.69 23.69 41.29 3.56
1030 2593 2.122768 GGATGACTGGATGGTCTCCTT 58.877 52.381 0.00 0.00 45.21 3.36
1031 2594 1.008815 TGGATGACTGGATGGTCTCCT 59.991 52.381 0.00 0.00 45.21 3.69
1032 2595 1.415659 CTGGATGACTGGATGGTCTCC 59.584 57.143 0.00 0.00 45.19 3.71
1033 2596 2.364970 CTCTGGATGACTGGATGGTCTC 59.635 54.545 0.00 0.00 37.16 3.36
1114 2677 4.008933 GGTGGTGTCCAGCGCTCT 62.009 66.667 7.13 0.00 42.21 4.09
1251 2832 2.046700 GGAATGGACGCCGGTGAA 60.047 61.111 24.59 7.16 0.00 3.18
1326 2907 4.115199 AATCCCCACTCAGCGGCC 62.115 66.667 0.00 0.00 0.00 6.13
1332 2913 1.289160 CCTGGAAGAATCCCCACTCA 58.711 55.000 0.00 0.00 45.95 3.41
1467 3048 1.371183 CTTGACCGCCTTGTCAGGA 59.629 57.895 2.73 0.00 45.37 3.86
1687 3994 0.033601 TTCCATTCCCAATCCCACGG 60.034 55.000 0.00 0.00 0.00 4.94
1688 3995 1.102978 GTTCCATTCCCAATCCCACG 58.897 55.000 0.00 0.00 0.00 4.94
1993 4671 8.557864 ACTATATTCGGATGTATATAGACGCAC 58.442 37.037 16.56 0.00 39.19 5.34
2137 5302 5.476945 GTGGGAAGTAATTTCACTGGACAAT 59.523 40.000 4.00 0.00 40.05 2.71
2608 5791 9.676861 CATGACACCCATATGTTGAATAGATAT 57.323 33.333 1.24 0.00 33.31 1.63
2683 6287 1.374252 CTGAACCCGTCGTTGGAGG 60.374 63.158 0.00 0.00 33.74 4.30
2771 6375 2.883828 CGAGGCAGGGTGGAACTGT 61.884 63.158 0.00 0.00 38.22 3.55
2909 6513 2.611225 ACCTGAAATCAGAGATCGCC 57.389 50.000 11.94 0.00 46.59 5.54
2972 6586 6.449698 ACTGCCATTTTACAATCACTTTCTG 58.550 36.000 0.00 0.00 0.00 3.02
3004 6622 9.457436 TTGACACTACACTATACAGTATTCTGA 57.543 33.333 6.32 0.00 43.76 3.27
3034 6652 4.466370 CCTCCGTCCCATAATATAAGAGCA 59.534 45.833 0.00 0.00 0.00 4.26
3051 6669 1.475403 CACTCATGTACTCCCTCCGT 58.525 55.000 0.00 0.00 0.00 4.69
3101 6719 2.620251 AGTGTGCTTGTTCTGCTACA 57.380 45.000 0.00 0.00 0.00 2.74
3131 6757 5.525012 CCATGCGAGAAAGTTGAATCTGATA 59.475 40.000 0.00 0.00 0.00 2.15
3205 6831 4.144297 GGCTGCATAAATCCAACCTATGA 58.856 43.478 0.50 0.00 0.00 2.15
3243 6872 3.083349 ATGCCCGCTAGCCTGACA 61.083 61.111 9.66 2.88 0.00 3.58
3251 6884 2.687935 GGAAAGAATTTGATGCCCGCTA 59.312 45.455 0.00 0.00 39.27 4.26
3262 6895 8.913487 ATCAAGAATTTTGCAGGAAAGAATTT 57.087 26.923 0.00 0.00 43.98 1.82
3275 6908 6.995511 AATGGATGGCAATCAAGAATTTTG 57.004 33.333 2.85 0.00 34.17 2.44
3317 6951 1.202336 GCAGTTTGGGCACTATGATGC 60.202 52.381 0.00 0.00 45.34 3.91
3345 6985 5.645497 CAGATAGAAGAGGAAAAACAGGTGG 59.355 44.000 0.00 0.00 0.00 4.61
3351 6991 7.606073 AGCTCTTTCAGATAGAAGAGGAAAAAC 59.394 37.037 13.21 0.00 37.57 2.43
3416 7058 5.955959 TGCCTAACTAACTGACTAGGATTGA 59.044 40.000 0.00 0.00 34.00 2.57
3596 8551 1.887242 GCGACGAATATGCTGGCCA 60.887 57.895 4.71 4.71 0.00 5.36
3694 8650 0.247460 CCGGAGACAGACATCAAGCA 59.753 55.000 0.00 0.00 0.00 3.91
3819 8776 6.915349 AGTCCGAATATAGATGCTCTTACAC 58.085 40.000 0.00 0.00 0.00 2.90
3831 8788 6.594159 ACCAAGTTTGTGAAGTCCGAATATAG 59.406 38.462 0.00 0.00 0.00 1.31
3834 8791 4.710324 ACCAAGTTTGTGAAGTCCGAATA 58.290 39.130 0.00 0.00 0.00 1.75
3835 8792 3.551846 ACCAAGTTTGTGAAGTCCGAAT 58.448 40.909 0.00 0.00 0.00 3.34
3836 8793 2.940410 GACCAAGTTTGTGAAGTCCGAA 59.060 45.455 0.00 0.00 0.00 4.30
3837 8794 2.557317 GACCAAGTTTGTGAAGTCCGA 58.443 47.619 0.00 0.00 0.00 4.55
3838 8795 1.602377 GGACCAAGTTTGTGAAGTCCG 59.398 52.381 0.00 0.00 34.92 4.79
3839 8796 1.954382 GGGACCAAGTTTGTGAAGTCC 59.046 52.381 8.59 8.59 42.48 3.85
3840 8797 2.618709 CAGGGACCAAGTTTGTGAAGTC 59.381 50.000 0.00 0.00 0.00 3.01
3841 8798 2.654863 CAGGGACCAAGTTTGTGAAGT 58.345 47.619 0.00 0.00 0.00 3.01
3842 8799 1.338020 GCAGGGACCAAGTTTGTGAAG 59.662 52.381 0.00 0.00 0.00 3.02
3843 8800 1.398692 GCAGGGACCAAGTTTGTGAA 58.601 50.000 0.00 0.00 0.00 3.18
3844 8801 0.817634 CGCAGGGACCAAGTTTGTGA 60.818 55.000 0.00 0.00 0.00 3.58
3845 8802 1.654220 CGCAGGGACCAAGTTTGTG 59.346 57.895 0.00 0.00 0.00 3.33
3846 8803 4.157607 CGCAGGGACCAAGTTTGT 57.842 55.556 0.00 0.00 0.00 2.83
3884 8841 3.642778 AATGTCCGGTCAGCGTCCG 62.643 63.158 7.60 9.59 46.49 4.79
3885 8842 1.810030 GAATGTCCGGTCAGCGTCC 60.810 63.158 7.60 0.00 0.00 4.79
3886 8843 1.810030 GGAATGTCCGGTCAGCGTC 60.810 63.158 7.60 4.64 0.00 5.19
3887 8844 2.264794 GGAATGTCCGGTCAGCGT 59.735 61.111 7.60 0.00 0.00 5.07
3888 8845 1.672854 TAGGGAATGTCCGGTCAGCG 61.673 60.000 7.60 0.00 37.43 5.18
3889 8846 0.179081 GTAGGGAATGTCCGGTCAGC 60.179 60.000 7.60 1.87 37.43 4.26
3890 8847 1.191535 TGTAGGGAATGTCCGGTCAG 58.808 55.000 7.60 0.00 37.43 3.51
3891 8848 1.760613 GATGTAGGGAATGTCCGGTCA 59.239 52.381 3.25 3.25 37.43 4.02
3892 8849 1.070289 GGATGTAGGGAATGTCCGGTC 59.930 57.143 0.00 0.00 37.43 4.79
3893 8850 1.129058 GGATGTAGGGAATGTCCGGT 58.871 55.000 0.00 0.00 37.43 5.28
3894 8851 0.033504 CGGATGTAGGGAATGTCCGG 59.966 60.000 0.00 0.00 45.92 5.14
3895 8852 3.588277 CGGATGTAGGGAATGTCCG 57.412 57.895 0.00 0.00 44.72 4.79
3896 8853 0.600255 CGCGGATGTAGGGAATGTCC 60.600 60.000 0.00 0.00 35.23 4.02
3897 8854 1.222115 GCGCGGATGTAGGGAATGTC 61.222 60.000 8.83 0.00 0.00 3.06
3898 8855 1.227556 GCGCGGATGTAGGGAATGT 60.228 57.895 8.83 0.00 0.00 2.71
3899 8856 1.961277 GGCGCGGATGTAGGGAATG 60.961 63.158 8.83 0.00 0.00 2.67
3900 8857 2.100879 GAGGCGCGGATGTAGGGAAT 62.101 60.000 8.83 0.00 0.00 3.01
3901 8858 2.762459 AGGCGCGGATGTAGGGAA 60.762 61.111 8.83 0.00 0.00 3.97
3902 8859 3.224324 GAGGCGCGGATGTAGGGA 61.224 66.667 8.83 0.00 0.00 4.20
3903 8860 4.301027 GGAGGCGCGGATGTAGGG 62.301 72.222 8.83 0.00 0.00 3.53
3904 8861 3.536917 TGGAGGCGCGGATGTAGG 61.537 66.667 8.83 0.00 0.00 3.18
3905 8862 2.279517 GTGGAGGCGCGGATGTAG 60.280 66.667 8.83 0.00 0.00 2.74
3906 8863 3.071837 TGTGGAGGCGCGGATGTA 61.072 61.111 8.83 0.00 0.00 2.29
3907 8864 4.760047 GTGTGGAGGCGCGGATGT 62.760 66.667 8.83 0.00 0.00 3.06
3916 8873 2.954868 GATACGCGCGTGTGGAGG 60.955 66.667 42.78 9.64 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.