Multiple sequence alignment - TraesCS2D01G023400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G023400 chr2D 100.000 4564 0 0 1 4564 10516098 10520661 0.000000e+00 8429
1 TraesCS2D01G023400 chr2D 91.371 985 67 10 1 970 10558531 10559512 0.000000e+00 1332
2 TraesCS2D01G023400 chr2D 95.602 523 23 0 4042 4564 234253469 234252947 0.000000e+00 839
3 TraesCS2D01G023400 chr2D 83.636 825 89 17 689 1508 10660169 10660952 0.000000e+00 734
4 TraesCS2D01G023400 chr2D 86.861 548 47 12 152 681 10657983 10658523 1.410000e-164 590
5 TraesCS2D01G023400 chr2D 99.254 268 2 0 1 268 10462238 10462505 6.860000e-133 484
6 TraesCS2D01G023400 chr2D 98.507 268 4 0 1 268 10288043 10287776 1.490000e-129 473
7 TraesCS2D01G023400 chr2D 97.761 268 6 0 1 268 10497459 10497726 3.220000e-126 462
8 TraesCS2D01G023400 chr2D 94.565 184 10 0 1855 2038 7955506 7955689 7.470000e-73 285
9 TraesCS2D01G023400 chr2D 94.054 185 11 0 1855 2039 636047981 636048165 9.670000e-72 281
10 TraesCS2D01G023400 chr2D 92.432 185 14 0 1854 2038 188525893 188525709 9.740000e-67 265
11 TraesCS2D01G023400 chr2B 95.042 1775 52 7 2166 3935 14413619 14415362 0.000000e+00 2758
12 TraesCS2D01G023400 chr2B 85.327 1622 197 29 2166 3770 13812363 13810766 0.000000e+00 1639
13 TraesCS2D01G023400 chr2B 90.918 1013 52 15 651 1662 14411854 14412827 0.000000e+00 1325
14 TraesCS2D01G023400 chr2B 81.899 1580 225 39 2239 3797 15822310 15823849 0.000000e+00 1277
15 TraesCS2D01G023400 chr2B 81.772 1580 227 39 2239 3797 15699002 15700541 0.000000e+00 1266
16 TraesCS2D01G023400 chr2B 83.446 1329 175 28 2239 3555 15761126 15762421 0.000000e+00 1194
17 TraesCS2D01G023400 chr2B 83.775 1171 156 16 2396 3563 15683617 15684756 0.000000e+00 1079
18 TraesCS2D01G023400 chr2B 83.775 1171 156 16 2396 3563 15745868 15747007 0.000000e+00 1079
19 TraesCS2D01G023400 chr2B 83.954 966 109 27 554 1508 14540771 14541701 0.000000e+00 883
20 TraesCS2D01G023400 chr2B 89.799 696 59 5 813 1508 14788502 14789185 0.000000e+00 881
21 TraesCS2D01G023400 chr2B 89.870 691 60 6 825 1511 13815112 13814428 0.000000e+00 880
22 TraesCS2D01G023400 chr2B 84.050 953 104 29 568 1508 14522919 14523835 0.000000e+00 874
23 TraesCS2D01G023400 chr2B 82.665 773 109 14 723 1485 15762436 15763193 0.000000e+00 662
24 TraesCS2D01G023400 chr2B 82.147 801 112 17 730 1514 15805436 15806221 0.000000e+00 658
25 TraesCS2D01G023400 chr2B 82.147 801 112 17 730 1514 15903776 15904561 0.000000e+00 658
26 TraesCS2D01G023400 chr2B 82.000 800 119 14 723 1512 15759700 15760484 0.000000e+00 656
27 TraesCS2D01G023400 chr2B 82.000 800 119 14 723 1512 15820884 15821668 0.000000e+00 656
28 TraesCS2D01G023400 chr2B 88.988 336 31 4 1 331 14539723 14540057 1.180000e-110 411
29 TraesCS2D01G023400 chr2B 80.952 210 32 8 292 495 14540075 14540282 4.730000e-35 159
30 TraesCS2D01G023400 chr2B 82.609 161 20 7 798 952 15743077 15743235 7.960000e-28 135
31 TraesCS2D01G023400 chr2A 80.725 1655 247 43 2166 3797 11216361 11217966 0.000000e+00 1223
32 TraesCS2D01G023400 chr2A 80.593 1654 252 40 2166 3797 11188936 11190542 0.000000e+00 1212
33 TraesCS2D01G023400 chr2A 85.421 487 46 11 152 619 10909968 10910448 2.470000e-132 483
34 TraesCS2D01G023400 chr2A 94.340 212 9 2 763 971 10910856 10911067 5.700000e-84 322
35 TraesCS2D01G023400 chr2A 96.341 82 3 0 2035 2116 173637932 173638013 7.960000e-28 135
36 TraesCS2D01G023400 chrUn 96.176 523 20 0 4042 4564 171691771 171691249 0.000000e+00 856
37 TraesCS2D01G023400 chrUn 77.687 1219 232 24 2354 3560 38680116 38678926 0.000000e+00 708
38 TraesCS2D01G023400 chrUn 82.147 801 112 17 730 1514 354973754 354972969 0.000000e+00 658
39 TraesCS2D01G023400 chrUn 98.134 268 5 0 1 268 365994628 365994361 6.910000e-128 468
40 TraesCS2D01G023400 chrUn 98.134 268 5 0 1 268 414314688 414314421 6.910000e-128 468
41 TraesCS2D01G023400 chrUn 92.500 120 8 1 2035 2153 263351956 263351837 2.180000e-38 171
42 TraesCS2D01G023400 chr6D 95.463 529 24 0 4036 4564 433167191 433167719 0.000000e+00 845
43 TraesCS2D01G023400 chr6D 94.118 187 10 1 1855 2040 448871793 448871607 2.690000e-72 283
44 TraesCS2D01G023400 chr3D 94.184 533 27 1 4036 4564 261053844 261054376 0.000000e+00 809
45 TraesCS2D01G023400 chr3D 94.626 521 27 1 4044 4564 140232535 140232016 0.000000e+00 806
46 TraesCS2D01G023400 chr3D 78.862 1178 221 16 2390 3563 27060310 27059157 0.000000e+00 771
47 TraesCS2D01G023400 chr3D 78.340 1205 227 21 2365 3564 26682526 26683701 0.000000e+00 749
48 TraesCS2D01G023400 chr3D 77.658 1204 236 21 2365 3564 26815106 26813932 0.000000e+00 702
49 TraesCS2D01G023400 chr3D 77.669 1227 215 33 2354 3563 26677551 26678735 0.000000e+00 693
50 TraesCS2D01G023400 chr3D 92.513 187 14 0 1855 2041 18778811 18778625 7.530000e-68 268
51 TraesCS2D01G023400 chr5D 94.455 523 29 0 4042 4564 382784196 382784718 0.000000e+00 806
52 TraesCS2D01G023400 chr5D 94.118 187 11 0 1855 2041 246284845 246284659 7.470000e-73 285
53 TraesCS2D01G023400 chr5D 87.919 149 17 1 1 149 558869469 558869322 1.690000e-39 174
54 TraesCS2D01G023400 chr1D 93.893 524 30 2 4042 4564 132399487 132398965 0.000000e+00 789
55 TraesCS2D01G023400 chr1D 93.702 524 32 1 4042 4564 132417651 132417128 0.000000e+00 784
56 TraesCS2D01G023400 chr1D 93.396 530 32 3 4036 4564 411616376 411616903 0.000000e+00 782
57 TraesCS2D01G023400 chr1D 94.022 184 11 0 1855 2038 3369091 3369274 3.480000e-71 279
58 TraesCS2D01G023400 chr3A 79.153 1180 214 20 2390 3563 36921121 36922274 0.000000e+00 787
59 TraesCS2D01G023400 chr3A 77.874 348 69 5 2528 2874 37097175 37097515 4.630000e-50 209
60 TraesCS2D01G023400 chr6B 94.022 184 11 0 1855 2038 719776652 719776835 3.480000e-71 279
61 TraesCS2D01G023400 chr6B 96.341 82 3 0 2035 2116 2839461 2839542 7.960000e-28 135
62 TraesCS2D01G023400 chr7D 92.391 184 14 0 1855 2038 28773265 28773082 3.500000e-66 263
63 TraesCS2D01G023400 chr7D 84.500 200 18 8 1670 1861 17471084 17470890 7.800000e-43 185
64 TraesCS2D01G023400 chr7B 88.384 198 14 8 1670 1859 745929979 745930175 3.550000e-56 230
65 TraesCS2D01G023400 chr7B 94.186 86 5 0 2035 2120 745930159 745930244 1.030000e-26 132
66 TraesCS2D01G023400 chr3B 88.265 196 16 5 1670 1858 131329040 131328845 1.280000e-55 228
67 TraesCS2D01G023400 chr3B 90.833 120 10 1 2035 2153 131328860 131328741 4.730000e-35 159
68 TraesCS2D01G023400 chr3B 89.344 122 10 2 2035 2153 711245220 711245099 2.840000e-32 150
69 TraesCS2D01G023400 chr4A 86.911 191 15 6 1670 1854 622786992 622786806 5.990000e-49 206
70 TraesCS2D01G023400 chr4A 83.582 201 25 5 1670 1862 705434041 705433841 1.010000e-41 182
71 TraesCS2D01G023400 chr4A 92.500 120 8 1 2035 2153 641850720 641850601 2.180000e-38 171
72 TraesCS2D01G023400 chr4A 87.200 125 12 3 2033 2153 651098422 651098298 6.160000e-29 139
73 TraesCS2D01G023400 chr7A 94.118 85 5 0 2035 2119 68554875 68554791 3.710000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G023400 chr2D 10516098 10520661 4563 False 8429.000000 8429 100.000000 1 4564 1 chr2D.!!$F4 4563
1 TraesCS2D01G023400 chr2D 10558531 10559512 981 False 1332.000000 1332 91.371000 1 970 1 chr2D.!!$F5 969
2 TraesCS2D01G023400 chr2D 234252947 234253469 522 True 839.000000 839 95.602000 4042 4564 1 chr2D.!!$R3 522
3 TraesCS2D01G023400 chr2D 10657983 10660952 2969 False 662.000000 734 85.248500 152 1508 2 chr2D.!!$F7 1356
4 TraesCS2D01G023400 chr2B 14411854 14415362 3508 False 2041.500000 2758 92.980000 651 3935 2 chr2B.!!$F7 3284
5 TraesCS2D01G023400 chr2B 15699002 15700541 1539 False 1266.000000 1266 81.772000 2239 3797 1 chr2B.!!$F4 1558
6 TraesCS2D01G023400 chr2B 13810766 13815112 4346 True 1259.500000 1639 87.598500 825 3770 2 chr2B.!!$R1 2945
7 TraesCS2D01G023400 chr2B 15683617 15684756 1139 False 1079.000000 1079 83.775000 2396 3563 1 chr2B.!!$F3 1167
8 TraesCS2D01G023400 chr2B 15820884 15823849 2965 False 966.500000 1277 81.949500 723 3797 2 chr2B.!!$F11 3074
9 TraesCS2D01G023400 chr2B 14788502 14789185 683 False 881.000000 881 89.799000 813 1508 1 chr2B.!!$F2 695
10 TraesCS2D01G023400 chr2B 14522919 14523835 916 False 874.000000 874 84.050000 568 1508 1 chr2B.!!$F1 940
11 TraesCS2D01G023400 chr2B 15759700 15763193 3493 False 837.333333 1194 82.703667 723 3555 3 chr2B.!!$F10 2832
12 TraesCS2D01G023400 chr2B 15805436 15806221 785 False 658.000000 658 82.147000 730 1514 1 chr2B.!!$F5 784
13 TraesCS2D01G023400 chr2B 15903776 15904561 785 False 658.000000 658 82.147000 730 1514 1 chr2B.!!$F6 784
14 TraesCS2D01G023400 chr2B 15743077 15747007 3930 False 607.000000 1079 83.192000 798 3563 2 chr2B.!!$F9 2765
15 TraesCS2D01G023400 chr2B 14539723 14541701 1978 False 484.333333 883 84.631333 1 1508 3 chr2B.!!$F8 1507
16 TraesCS2D01G023400 chr2A 11216361 11217966 1605 False 1223.000000 1223 80.725000 2166 3797 1 chr2A.!!$F2 1631
17 TraesCS2D01G023400 chr2A 11188936 11190542 1606 False 1212.000000 1212 80.593000 2166 3797 1 chr2A.!!$F1 1631
18 TraesCS2D01G023400 chr2A 10909968 10911067 1099 False 402.500000 483 89.880500 152 971 2 chr2A.!!$F4 819
19 TraesCS2D01G023400 chrUn 171691249 171691771 522 True 856.000000 856 96.176000 4042 4564 1 chrUn.!!$R2 522
20 TraesCS2D01G023400 chrUn 38678926 38680116 1190 True 708.000000 708 77.687000 2354 3560 1 chrUn.!!$R1 1206
21 TraesCS2D01G023400 chrUn 354972969 354973754 785 True 658.000000 658 82.147000 730 1514 1 chrUn.!!$R4 784
22 TraesCS2D01G023400 chr6D 433167191 433167719 528 False 845.000000 845 95.463000 4036 4564 1 chr6D.!!$F1 528
23 TraesCS2D01G023400 chr3D 261053844 261054376 532 False 809.000000 809 94.184000 4036 4564 1 chr3D.!!$F1 528
24 TraesCS2D01G023400 chr3D 140232016 140232535 519 True 806.000000 806 94.626000 4044 4564 1 chr3D.!!$R4 520
25 TraesCS2D01G023400 chr3D 27059157 27060310 1153 True 771.000000 771 78.862000 2390 3563 1 chr3D.!!$R3 1173
26 TraesCS2D01G023400 chr3D 26677551 26683701 6150 False 721.000000 749 78.004500 2354 3564 2 chr3D.!!$F2 1210
27 TraesCS2D01G023400 chr3D 26813932 26815106 1174 True 702.000000 702 77.658000 2365 3564 1 chr3D.!!$R2 1199
28 TraesCS2D01G023400 chr5D 382784196 382784718 522 False 806.000000 806 94.455000 4042 4564 1 chr5D.!!$F1 522
29 TraesCS2D01G023400 chr1D 132398965 132399487 522 True 789.000000 789 93.893000 4042 4564 1 chr1D.!!$R1 522
30 TraesCS2D01G023400 chr1D 132417128 132417651 523 True 784.000000 784 93.702000 4042 4564 1 chr1D.!!$R2 522
31 TraesCS2D01G023400 chr1D 411616376 411616903 527 False 782.000000 782 93.396000 4036 4564 1 chr1D.!!$F2 528
32 TraesCS2D01G023400 chr3A 36921121 36922274 1153 False 787.000000 787 79.153000 2390 3563 1 chr3A.!!$F1 1173

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.101399 GCACGACGAGATCTGGATGT 59.899 55.0 12.14 6.3 0.00 3.06 F
1908 5111 0.102481 GCGGACCTCGAAATCAGCTA 59.898 55.0 11.76 0.0 42.43 3.32 F
2058 5261 0.114168 TTGGGTGCCATGCTTAAGGT 59.886 50.0 4.29 0.0 31.53 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1920 5123 0.039180 TAGCCTGCTATAGCCCGCTA 59.961 55.0 26.87 26.87 42.16 4.26 R
3171 8288 0.038021 TTGCAGTCAGCCATAGCCAA 59.962 50.0 0.00 0.00 44.83 4.52 R
3974 14322 0.039527 CCCAAAACTACGCACCAAGC 60.040 55.0 0.00 0.00 40.87 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.101399 GCACGACGAGATCTGGATGT 59.899 55.000 12.14 6.30 0.00 3.06
23 24 0.101399 ACGACGAGATCTGGATGTGC 59.899 55.000 12.14 0.00 0.00 4.57
46 47 6.154445 GCGATTAATAAGACCGAACTATCCA 58.846 40.000 0.00 0.00 0.00 3.41
55 56 6.057321 AGACCGAACTATCCAAAAATACCA 57.943 37.500 0.00 0.00 0.00 3.25
86 87 9.918630 TGCCTTAATATACTACCGAAATTCTAC 57.081 33.333 0.00 0.00 0.00 2.59
92 93 4.298744 ACTACCGAAATTCTACCGTAGC 57.701 45.455 0.18 0.00 0.00 3.58
130 133 7.975616 TGAGCCATTAAATCACAGAAATAAAGC 59.024 33.333 0.00 0.00 0.00 3.51
169 175 5.506686 TGTTCCGTCAAAACATTGATCAA 57.493 34.783 11.26 11.26 31.90 2.57
202 208 3.552890 GCAGTGAAGGAATTGGTGTTTCC 60.553 47.826 0.00 0.00 42.51 3.13
214 220 2.035704 TGGTGTTTCCATTGATGTGTGC 59.964 45.455 0.00 0.00 41.93 4.57
332 342 8.021396 GTGAAGTTTAACTCGATGGCTAAAATT 58.979 33.333 0.00 0.00 0.00 1.82
505 596 9.952188 TTGATCAGAGTATAAACACGAGATAAG 57.048 33.333 0.00 0.00 0.00 1.73
518 609 2.100252 CGAGATAAGGGGTTCAACGCTA 59.900 50.000 4.37 0.00 32.86 4.26
519 610 3.243771 CGAGATAAGGGGTTCAACGCTAT 60.244 47.826 4.37 0.00 32.86 2.97
545 636 9.796062 TCTAAAACAAACGTACGTAATTCATTC 57.204 29.630 23.12 0.00 0.00 2.67
703 2848 4.572909 GAGTCTACCAAATAACGGGTTGT 58.427 43.478 0.00 0.00 38.60 3.32
728 2874 1.203052 GTCTTGCCCATGATGTTGGTG 59.797 52.381 0.00 0.00 34.77 4.17
733 2879 2.036992 TGCCCATGATGTTGGTGTTTTC 59.963 45.455 0.00 0.00 34.77 2.29
1076 3243 1.071605 CCGCTCTTCCTCTTGTTTCG 58.928 55.000 0.00 0.00 0.00 3.46
1134 3301 2.359230 GGGCAGCAGCGAGAAAGT 60.359 61.111 0.00 0.00 43.41 2.66
1392 3559 3.580022 TCATCTTGTATGGCTCATCCGAT 59.420 43.478 0.00 0.00 37.80 4.18
1582 4783 3.394674 TTGCGACCAAGATTGTCACTA 57.605 42.857 0.00 0.00 0.00 2.74
1596 4797 1.823899 CACTAGGAATTGCGGGCCC 60.824 63.158 13.57 13.57 0.00 5.80
1614 4817 4.058817 GGCCCTGACTTGAAATACGATAG 58.941 47.826 0.00 0.00 46.19 2.08
1654 4857 6.347160 GGAAAGCATAAACGTCGTTCTAGTTT 60.347 38.462 11.71 7.90 40.61 2.66
1655 4858 7.148755 GGAAAGCATAAACGTCGTTCTAGTTTA 60.149 37.037 11.71 0.00 42.26 2.01
1656 4859 6.866179 AGCATAAACGTCGTTCTAGTTTAG 57.134 37.500 11.71 0.00 41.64 1.85
1657 4860 6.615088 AGCATAAACGTCGTTCTAGTTTAGA 58.385 36.000 11.71 0.00 41.64 2.10
1658 4861 7.256286 AGCATAAACGTCGTTCTAGTTTAGAT 58.744 34.615 11.71 0.00 41.64 1.98
1659 4862 8.400947 AGCATAAACGTCGTTCTAGTTTAGATA 58.599 33.333 11.71 0.00 41.64 1.98
1660 4863 8.680261 GCATAAACGTCGTTCTAGTTTAGATAG 58.320 37.037 11.71 0.00 41.64 2.08
1661 4864 9.926751 CATAAACGTCGTTCTAGTTTAGATAGA 57.073 33.333 11.71 0.00 41.64 1.98
1662 4865 9.928236 ATAAACGTCGTTCTAGTTTAGATAGAC 57.072 33.333 11.71 9.50 41.64 2.59
1663 4866 7.608308 AACGTCGTTCTAGTTTAGATAGACT 57.392 36.000 4.40 0.00 38.40 3.24
1664 4867 8.709386 AACGTCGTTCTAGTTTAGATAGACTA 57.291 34.615 4.40 0.00 38.40 2.59
1666 4869 7.978975 ACGTCGTTCTAGTTTAGATAGACTAGT 59.021 37.037 14.04 0.00 43.61 2.57
1667 4870 8.479280 CGTCGTTCTAGTTTAGATAGACTAGTC 58.521 40.741 15.41 15.41 43.61 2.59
1668 4871 9.311916 GTCGTTCTAGTTTAGATAGACTAGTCA 57.688 37.037 24.44 11.06 43.61 3.41
1669 4872 9.531942 TCGTTCTAGTTTAGATAGACTAGTCAG 57.468 37.037 24.44 9.11 43.61 3.51
1670 4873 8.277713 CGTTCTAGTTTAGATAGACTAGTCAGC 58.722 40.741 24.44 12.99 43.61 4.26
1671 4874 9.111613 GTTCTAGTTTAGATAGACTAGTCAGCA 57.888 37.037 24.44 9.71 43.61 4.41
1673 4876 6.385649 AGTTTAGATAGACTAGTCAGCAGC 57.614 41.667 24.44 11.73 32.30 5.25
1674 4877 5.888724 AGTTTAGATAGACTAGTCAGCAGCA 59.111 40.000 24.44 1.91 32.30 4.41
1675 4878 5.759506 TTAGATAGACTAGTCAGCAGCAC 57.240 43.478 24.44 8.47 32.30 4.40
1676 4879 2.616376 AGATAGACTAGTCAGCAGCACG 59.384 50.000 24.44 0.00 0.00 5.34
1677 4880 1.095600 TAGACTAGTCAGCAGCACGG 58.904 55.000 24.44 0.00 0.00 4.94
1678 4881 1.153745 GACTAGTCAGCAGCACGGG 60.154 63.158 18.20 0.00 0.00 5.28
1679 4882 2.510238 CTAGTCAGCAGCACGGGC 60.510 66.667 0.00 0.00 41.61 6.13
1691 4894 1.459450 GCACGGGCTAATTTTGGAGA 58.541 50.000 0.00 0.00 36.96 3.71
1692 4895 1.132453 GCACGGGCTAATTTTGGAGAC 59.868 52.381 0.00 0.00 36.96 3.36
1693 4896 2.432444 CACGGGCTAATTTTGGAGACA 58.568 47.619 0.00 0.00 39.83 3.41
1694 4897 3.016736 CACGGGCTAATTTTGGAGACAT 58.983 45.455 0.00 0.00 42.32 3.06
1695 4898 3.016736 ACGGGCTAATTTTGGAGACATG 58.983 45.455 0.00 0.00 42.32 3.21
1696 4899 2.223572 CGGGCTAATTTTGGAGACATGC 60.224 50.000 0.00 0.00 42.32 4.06
1697 4900 3.026694 GGGCTAATTTTGGAGACATGCT 58.973 45.455 0.00 0.00 42.32 3.79
1698 4901 4.207165 GGGCTAATTTTGGAGACATGCTA 58.793 43.478 0.00 0.00 42.32 3.49
1699 4902 4.036852 GGGCTAATTTTGGAGACATGCTAC 59.963 45.833 0.00 0.00 42.32 3.58
1700 4903 4.640201 GGCTAATTTTGGAGACATGCTACA 59.360 41.667 0.00 0.00 42.32 2.74
1701 4904 5.125417 GGCTAATTTTGGAGACATGCTACAA 59.875 40.000 9.82 9.82 45.74 2.41
1702 4905 6.183360 GGCTAATTTTGGAGACATGCTACAAT 60.183 38.462 13.39 4.55 46.61 2.71
1703 4906 7.013274 GGCTAATTTTGGAGACATGCTACAATA 59.987 37.037 13.39 10.25 46.61 1.90
1704 4907 8.072567 GCTAATTTTGGAGACATGCTACAATAG 58.927 37.037 13.39 12.77 46.61 1.73
1705 4908 9.330063 CTAATTTTGGAGACATGCTACAATAGA 57.670 33.333 13.39 6.00 46.61 1.98
1706 4909 8.579850 AATTTTGGAGACATGCTACAATAGAA 57.420 30.769 13.39 7.52 46.61 2.10
1707 4910 7.615582 TTTTGGAGACATGCTACAATAGAAG 57.384 36.000 13.39 0.00 46.61 2.85
1708 4911 5.939764 TGGAGACATGCTACAATAGAAGT 57.060 39.130 0.00 0.00 33.41 3.01
1709 4912 7.418337 TTGGAGACATGCTACAATAGAAGTA 57.582 36.000 9.82 0.00 42.56 2.24
1710 4913 6.806751 TGGAGACATGCTACAATAGAAGTAC 58.193 40.000 0.00 0.00 33.41 2.73
1711 4914 6.183360 TGGAGACATGCTACAATAGAAGTACC 60.183 42.308 0.00 0.00 33.41 3.34
1712 4915 6.183360 GGAGACATGCTACAATAGAAGTACCA 60.183 42.308 0.00 0.00 0.00 3.25
1713 4916 7.182817 AGACATGCTACAATAGAAGTACCAA 57.817 36.000 0.00 0.00 0.00 3.67
1714 4917 7.796054 AGACATGCTACAATAGAAGTACCAAT 58.204 34.615 0.00 0.00 0.00 3.16
1715 4918 7.712639 AGACATGCTACAATAGAAGTACCAATG 59.287 37.037 0.00 0.00 0.00 2.82
1716 4919 6.260936 ACATGCTACAATAGAAGTACCAATGC 59.739 38.462 0.00 0.00 0.00 3.56
1717 4920 5.123227 TGCTACAATAGAAGTACCAATGCC 58.877 41.667 0.00 0.00 0.00 4.40
1718 4921 5.123227 GCTACAATAGAAGTACCAATGCCA 58.877 41.667 0.00 0.00 0.00 4.92
1719 4922 5.765182 GCTACAATAGAAGTACCAATGCCAT 59.235 40.000 0.00 0.00 0.00 4.40
1720 4923 6.263168 GCTACAATAGAAGTACCAATGCCATT 59.737 38.462 0.00 0.00 0.00 3.16
1721 4924 7.201821 GCTACAATAGAAGTACCAATGCCATTT 60.202 37.037 0.00 0.00 0.00 2.32
1722 4925 9.337396 CTACAATAGAAGTACCAATGCCATTTA 57.663 33.333 0.00 0.00 0.00 1.40
1723 4926 8.766994 ACAATAGAAGTACCAATGCCATTTAT 57.233 30.769 0.00 0.00 0.00 1.40
1724 4927 9.200817 ACAATAGAAGTACCAATGCCATTTATT 57.799 29.630 0.00 0.00 0.00 1.40
1803 5006 8.907222 ACATGGAAAATTTGTTTTCTTAGCAT 57.093 26.923 11.90 5.78 39.99 3.79
1804 5007 8.776470 ACATGGAAAATTTGTTTTCTTAGCATG 58.224 29.630 18.34 18.34 39.69 4.06
1839 5042 9.295825 TCATAAGAAATGTTACCAAAGACACAT 57.704 29.630 0.00 0.00 0.00 3.21
1841 5044 9.912634 ATAAGAAATGTTACCAAAGACACATTG 57.087 29.630 0.00 0.00 39.31 2.82
1842 5045 7.581213 AGAAATGTTACCAAAGACACATTGA 57.419 32.000 0.00 0.00 39.31 2.57
1844 5047 8.641541 AGAAATGTTACCAAAGACACATTGATT 58.358 29.630 0.00 0.00 39.31 2.57
1845 5048 9.260002 GAAATGTTACCAAAGACACATTGATTT 57.740 29.630 0.00 0.00 39.31 2.17
1849 5052 9.689976 TGTTACCAAAGACACATTGATTTATTG 57.310 29.630 0.00 0.00 0.00 1.90
1850 5053 9.139174 GTTACCAAAGACACATTGATTTATTGG 57.861 33.333 0.00 0.00 0.00 3.16
1851 5054 6.700352 ACCAAAGACACATTGATTTATTGGG 58.300 36.000 14.76 0.00 0.00 4.12
1852 5055 6.269769 ACCAAAGACACATTGATTTATTGGGT 59.730 34.615 14.76 0.00 0.00 4.51
1853 5056 6.591062 CCAAAGACACATTGATTTATTGGGTG 59.409 38.462 0.00 0.00 0.00 4.61
1854 5057 5.329035 AGACACATTGATTTATTGGGTGC 57.671 39.130 0.00 0.00 0.00 5.01
1855 5058 4.771577 AGACACATTGATTTATTGGGTGCA 59.228 37.500 0.00 0.00 0.00 4.57
1856 5059 5.245751 AGACACATTGATTTATTGGGTGCAA 59.754 36.000 0.00 0.00 0.00 4.08
1857 5060 6.052405 ACACATTGATTTATTGGGTGCAAT 57.948 33.333 0.00 0.00 0.00 3.56
1858 5061 5.875910 ACACATTGATTTATTGGGTGCAATG 59.124 36.000 0.00 0.00 44.75 2.82
1859 5062 6.052405 ACATTGATTTATTGGGTGCAATGT 57.948 33.333 11.81 11.81 46.23 2.71
1860 5063 6.988622 CATTGATTTATTGGGTGCAATGTT 57.011 33.333 0.00 0.00 38.34 2.71
1861 5064 7.380431 CATTGATTTATTGGGTGCAATGTTT 57.620 32.000 0.00 0.00 38.34 2.83
1862 5065 7.818642 CATTGATTTATTGGGTGCAATGTTTT 58.181 30.769 0.00 0.00 38.34 2.43
1863 5066 8.944029 CATTGATTTATTGGGTGCAATGTTTTA 58.056 29.630 0.00 0.00 38.34 1.52
1864 5067 8.908786 TTGATTTATTGGGTGCAATGTTTTAA 57.091 26.923 0.00 0.00 0.00 1.52
1865 5068 8.908786 TGATTTATTGGGTGCAATGTTTTAAA 57.091 26.923 0.00 0.00 0.00 1.52
1866 5069 9.512588 TGATTTATTGGGTGCAATGTTTTAAAT 57.487 25.926 0.00 0.00 0.00 1.40
1869 5072 6.983474 ATTGGGTGCAATGTTTTAAATAGC 57.017 33.333 0.00 0.00 0.00 2.97
1870 5073 4.489810 TGGGTGCAATGTTTTAAATAGCG 58.510 39.130 0.00 0.00 0.00 4.26
1871 5074 3.862845 GGGTGCAATGTTTTAAATAGCGG 59.137 43.478 0.00 0.00 0.00 5.52
1872 5075 3.862845 GGTGCAATGTTTTAAATAGCGGG 59.137 43.478 0.00 0.00 0.00 6.13
1873 5076 3.305897 GTGCAATGTTTTAAATAGCGGGC 59.694 43.478 0.00 0.00 0.00 6.13
1874 5077 3.194542 TGCAATGTTTTAAATAGCGGGCT 59.805 39.130 0.00 0.00 0.00 5.19
1875 5078 4.399618 TGCAATGTTTTAAATAGCGGGCTA 59.600 37.500 2.42 2.42 0.00 3.93
1876 5079 5.068460 TGCAATGTTTTAAATAGCGGGCTAT 59.932 36.000 7.36 7.36 40.63 2.97
1878 5081 6.074356 GCAATGTTTTAAATAGCGGGCTATTG 60.074 38.462 22.61 12.69 45.37 1.90
1879 5082 4.927422 TGTTTTAAATAGCGGGCTATTGC 58.073 39.130 22.61 12.89 45.37 3.56
1895 5098 2.518587 GCCAAATAGGGGCGGACC 60.519 66.667 0.00 0.00 42.39 4.46
1896 5099 3.056754 GCCAAATAGGGGCGGACCT 62.057 63.158 0.00 0.00 42.39 3.85
1897 5100 1.148498 CCAAATAGGGGCGGACCTC 59.852 63.158 0.00 0.00 42.09 3.85
1898 5101 1.227556 CAAATAGGGGCGGACCTCG 60.228 63.158 0.00 0.00 43.67 4.63
1899 5102 1.382146 AAATAGGGGCGGACCTCGA 60.382 57.895 0.00 0.00 43.67 4.04
1900 5103 0.979187 AAATAGGGGCGGACCTCGAA 60.979 55.000 0.00 0.00 43.67 3.71
1901 5104 0.979187 AATAGGGGCGGACCTCGAAA 60.979 55.000 0.00 0.00 43.67 3.46
1902 5105 0.763223 ATAGGGGCGGACCTCGAAAT 60.763 55.000 0.00 0.00 43.67 2.17
1903 5106 1.397390 TAGGGGCGGACCTCGAAATC 61.397 60.000 0.00 0.00 43.67 2.17
1904 5107 2.582436 GGGCGGACCTCGAAATCA 59.418 61.111 0.00 0.00 42.43 2.57
1905 5108 1.521681 GGGCGGACCTCGAAATCAG 60.522 63.158 0.00 0.00 42.43 2.90
1906 5109 2.174319 GGCGGACCTCGAAATCAGC 61.174 63.158 10.90 10.90 42.43 4.26
1907 5110 1.153549 GCGGACCTCGAAATCAGCT 60.154 57.895 11.76 0.00 42.43 4.24
1908 5111 0.102481 GCGGACCTCGAAATCAGCTA 59.898 55.000 11.76 0.00 42.43 3.32
1909 5112 1.269831 GCGGACCTCGAAATCAGCTAT 60.270 52.381 11.76 0.00 42.43 2.97
1910 5113 2.030185 GCGGACCTCGAAATCAGCTATA 60.030 50.000 11.76 0.00 42.43 1.31
1911 5114 3.827625 CGGACCTCGAAATCAGCTATAG 58.172 50.000 0.00 0.00 42.43 1.31
1912 5115 3.580731 GGACCTCGAAATCAGCTATAGC 58.419 50.000 17.33 17.33 42.49 2.97
1926 5129 3.694535 CTATAGCGGAGTTATAGCGGG 57.305 52.381 0.00 0.00 44.72 6.13
1927 5130 0.531200 ATAGCGGAGTTATAGCGGGC 59.469 55.000 0.00 0.00 30.45 6.13
1928 5131 0.538977 TAGCGGAGTTATAGCGGGCT 60.539 55.000 0.00 0.00 35.78 5.19
1929 5132 0.538977 AGCGGAGTTATAGCGGGCTA 60.539 55.000 2.42 2.42 35.78 3.93
1930 5133 0.531200 GCGGAGTTATAGCGGGCTAT 59.469 55.000 16.61 16.61 41.58 2.97
1931 5134 1.747355 GCGGAGTTATAGCGGGCTATA 59.253 52.381 14.70 14.70 39.65 1.31
1932 5135 2.223525 GCGGAGTTATAGCGGGCTATAG 60.224 54.545 17.19 9.11 41.02 1.31
1933 5136 2.223525 CGGAGTTATAGCGGGCTATAGC 60.224 54.545 20.35 20.35 41.02 2.97
1934 5137 2.758979 GGAGTTATAGCGGGCTATAGCA 59.241 50.000 26.01 5.60 41.83 3.49
1935 5138 3.181485 GGAGTTATAGCGGGCTATAGCAG 60.181 52.174 26.01 18.85 41.83 4.24
1936 5139 2.761208 AGTTATAGCGGGCTATAGCAGG 59.239 50.000 26.01 16.87 41.83 4.85
1947 5150 2.379972 CTATAGCAGGCTATAGCGGGT 58.620 52.381 26.57 18.90 46.26 5.28
1948 5151 1.645710 ATAGCAGGCTATAGCGGGTT 58.354 50.000 20.21 14.31 43.26 4.11
1949 5152 2.297698 TAGCAGGCTATAGCGGGTTA 57.702 50.000 20.21 13.48 43.26 2.85
1950 5153 1.645710 AGCAGGCTATAGCGGGTTAT 58.354 50.000 18.30 0.00 43.26 1.89
1951 5154 1.978580 AGCAGGCTATAGCGGGTTATT 59.021 47.619 18.30 0.00 43.26 1.40
1952 5155 2.372172 AGCAGGCTATAGCGGGTTATTT 59.628 45.455 18.30 0.00 43.26 1.40
1953 5156 2.484264 GCAGGCTATAGCGGGTTATTTG 59.516 50.000 18.30 7.46 43.26 2.32
1954 5157 3.740115 CAGGCTATAGCGGGTTATTTGT 58.260 45.455 18.30 0.00 43.26 2.83
1955 5158 4.801581 GCAGGCTATAGCGGGTTATTTGTA 60.802 45.833 18.30 0.00 43.26 2.41
1956 5159 4.689345 CAGGCTATAGCGGGTTATTTGTAC 59.311 45.833 18.30 0.00 43.26 2.90
1957 5160 4.345837 AGGCTATAGCGGGTTATTTGTACA 59.654 41.667 18.30 0.00 43.26 2.90
1958 5161 5.012768 AGGCTATAGCGGGTTATTTGTACAT 59.987 40.000 18.30 0.00 43.26 2.29
1959 5162 5.121768 GGCTATAGCGGGTTATTTGTACATG 59.878 44.000 18.30 0.00 43.26 3.21
1960 5163 5.121768 GCTATAGCGGGTTATTTGTACATGG 59.878 44.000 9.40 0.00 0.00 3.66
1961 5164 2.650322 AGCGGGTTATTTGTACATGGG 58.350 47.619 0.00 0.00 0.00 4.00
1962 5165 2.240160 AGCGGGTTATTTGTACATGGGA 59.760 45.455 0.00 0.00 0.00 4.37
1963 5166 2.356695 GCGGGTTATTTGTACATGGGAC 59.643 50.000 0.00 0.00 0.00 4.46
1964 5167 3.881220 CGGGTTATTTGTACATGGGACT 58.119 45.455 0.00 0.00 0.00 3.85
1965 5168 4.683942 GCGGGTTATTTGTACATGGGACTA 60.684 45.833 0.00 0.00 0.00 2.59
1966 5169 5.617252 CGGGTTATTTGTACATGGGACTAT 58.383 41.667 0.00 0.00 0.00 2.12
1967 5170 6.059484 CGGGTTATTTGTACATGGGACTATT 58.941 40.000 0.00 0.00 0.00 1.73
1968 5171 6.544564 CGGGTTATTTGTACATGGGACTATTT 59.455 38.462 0.00 0.00 0.00 1.40
1969 5172 7.716123 CGGGTTATTTGTACATGGGACTATTTA 59.284 37.037 0.00 0.00 0.00 1.40
1970 5173 9.063615 GGGTTATTTGTACATGGGACTATTTAG 57.936 37.037 0.00 0.00 0.00 1.85
1971 5174 8.565416 GGTTATTTGTACATGGGACTATTTAGC 58.435 37.037 0.00 0.00 0.00 3.09
1972 5175 6.861065 ATTTGTACATGGGACTATTTAGCG 57.139 37.500 0.00 0.00 0.00 4.26
1973 5176 4.330944 TGTACATGGGACTATTTAGCGG 57.669 45.455 0.00 0.00 0.00 5.52
1974 5177 2.256117 ACATGGGACTATTTAGCGGC 57.744 50.000 0.00 0.00 0.00 6.53
1975 5178 1.488812 ACATGGGACTATTTAGCGGCA 59.511 47.619 1.45 0.00 0.00 5.69
1976 5179 1.873591 CATGGGACTATTTAGCGGCAC 59.126 52.381 1.45 0.00 0.00 5.01
1977 5180 0.179468 TGGGACTATTTAGCGGCACC 59.821 55.000 1.45 0.00 0.00 5.01
1978 5181 0.534427 GGGACTATTTAGCGGCACCC 60.534 60.000 1.45 0.00 0.00 4.61
1979 5182 0.468648 GGACTATTTAGCGGCACCCT 59.531 55.000 1.45 0.00 0.00 4.34
1980 5183 1.583054 GACTATTTAGCGGCACCCTG 58.417 55.000 1.45 0.00 0.00 4.45
1981 5184 0.463833 ACTATTTAGCGGCACCCTGC 60.464 55.000 1.45 0.00 44.08 4.85
1982 5185 0.179045 CTATTTAGCGGCACCCTGCT 60.179 55.000 1.45 2.32 44.28 4.24
1989 5192 3.369921 GGCACCCTGCTGAAAAGG 58.630 61.111 0.00 0.00 44.28 3.11
1990 5193 2.653115 GCACCCTGCTGAAAAGGC 59.347 61.111 0.00 0.00 40.96 4.35
1991 5194 1.905354 GCACCCTGCTGAAAAGGCT 60.905 57.895 0.00 0.00 40.96 4.58
1992 5195 0.609131 GCACCCTGCTGAAAAGGCTA 60.609 55.000 0.00 0.00 40.96 3.93
1993 5196 1.957113 GCACCCTGCTGAAAAGGCTAT 60.957 52.381 0.00 0.00 40.96 2.97
1994 5197 2.683742 GCACCCTGCTGAAAAGGCTATA 60.684 50.000 0.00 0.00 40.96 1.31
1995 5198 3.825328 CACCCTGCTGAAAAGGCTATAT 58.175 45.455 0.00 0.00 33.07 0.86
1996 5199 4.746702 GCACCCTGCTGAAAAGGCTATATA 60.747 45.833 0.00 0.00 40.96 0.86
1997 5200 4.999950 CACCCTGCTGAAAAGGCTATATAG 59.000 45.833 5.30 5.30 33.07 1.31
2010 5213 4.825546 GCTATATAGCGGGTTATAGCGA 57.174 45.455 18.61 0.00 41.79 4.93
2011 5214 5.179045 GCTATATAGCGGGTTATAGCGAA 57.821 43.478 18.61 0.00 41.79 4.70
2012 5215 5.213675 GCTATATAGCGGGTTATAGCGAAG 58.786 45.833 18.61 0.00 41.79 3.79
2027 5230 2.656560 CGAAGCTATAGCCGGCTATT 57.343 50.000 44.65 31.63 43.38 1.73
2028 5231 2.960819 CGAAGCTATAGCCGGCTATTT 58.039 47.619 44.65 34.49 43.38 1.40
2029 5232 4.106029 CGAAGCTATAGCCGGCTATTTA 57.894 45.455 44.65 30.51 43.38 1.40
2030 5233 4.491676 CGAAGCTATAGCCGGCTATTTAA 58.508 43.478 44.65 29.85 43.38 1.52
2031 5234 4.927425 CGAAGCTATAGCCGGCTATTTAAA 59.073 41.667 44.65 29.52 43.38 1.52
2032 5235 5.407387 CGAAGCTATAGCCGGCTATTTAAAA 59.593 40.000 44.65 29.19 43.38 1.52
2033 5236 6.555812 AAGCTATAGCCGGCTATTTAAAAC 57.444 37.500 44.65 28.54 43.38 2.43
2034 5237 5.617252 AGCTATAGCCGGCTATTTAAAACA 58.383 37.500 44.65 27.89 43.38 2.83
2035 5238 6.238648 AGCTATAGCCGGCTATTTAAAACAT 58.761 36.000 44.65 26.89 43.38 2.71
2036 5239 6.715264 AGCTATAGCCGGCTATTTAAAACATT 59.285 34.615 44.65 25.26 43.38 2.71
2037 5240 6.801862 GCTATAGCCGGCTATTTAAAACATTG 59.198 38.462 44.65 25.37 39.65 2.82
2038 5241 6.952773 ATAGCCGGCTATTTAAAACATTGA 57.047 33.333 37.79 15.44 35.92 2.57
2039 5242 5.852282 AGCCGGCTATTTAAAACATTGAT 57.148 34.783 31.86 0.00 0.00 2.57
2040 5243 6.220726 AGCCGGCTATTTAAAACATTGATT 57.779 33.333 31.86 0.00 0.00 2.57
2041 5244 6.042143 AGCCGGCTATTTAAAACATTGATTG 58.958 36.000 31.86 0.00 0.00 2.67
2042 5245 5.234116 GCCGGCTATTTAAAACATTGATTGG 59.766 40.000 22.15 0.00 0.00 3.16
2043 5246 5.752955 CCGGCTATTTAAAACATTGATTGGG 59.247 40.000 0.00 0.00 0.00 4.12
2044 5247 6.337356 CGGCTATTTAAAACATTGATTGGGT 58.663 36.000 0.00 0.00 0.00 4.51
2045 5248 6.255453 CGGCTATTTAAAACATTGATTGGGTG 59.745 38.462 0.00 0.00 0.00 4.61
2046 5249 6.037062 GGCTATTTAAAACATTGATTGGGTGC 59.963 38.462 0.00 0.00 0.00 5.01
2047 5250 6.037062 GCTATTTAAAACATTGATTGGGTGCC 59.963 38.462 0.00 0.00 0.00 5.01
2048 5251 4.963318 TTAAAACATTGATTGGGTGCCA 57.037 36.364 0.00 0.00 0.00 4.92
2049 5252 5.495926 TTAAAACATTGATTGGGTGCCAT 57.504 34.783 0.00 0.00 31.53 4.40
2050 5253 3.337694 AAACATTGATTGGGTGCCATG 57.662 42.857 0.00 0.00 31.53 3.66
2051 5254 0.538118 ACATTGATTGGGTGCCATGC 59.462 50.000 0.00 0.00 31.53 4.06
2052 5255 0.828022 CATTGATTGGGTGCCATGCT 59.172 50.000 0.00 0.00 31.53 3.79
2053 5256 1.208535 CATTGATTGGGTGCCATGCTT 59.791 47.619 0.00 0.00 31.53 3.91
2054 5257 2.228545 TTGATTGGGTGCCATGCTTA 57.771 45.000 0.00 0.00 31.53 3.09
2055 5258 2.228545 TGATTGGGTGCCATGCTTAA 57.771 45.000 0.00 0.00 31.53 1.85
2056 5259 2.101783 TGATTGGGTGCCATGCTTAAG 58.898 47.619 0.00 0.00 31.53 1.85
2057 5260 1.410153 GATTGGGTGCCATGCTTAAGG 59.590 52.381 4.29 0.00 31.53 2.69
2058 5261 0.114168 TTGGGTGCCATGCTTAAGGT 59.886 50.000 4.29 0.00 31.53 3.50
2059 5262 0.611618 TGGGTGCCATGCTTAAGGTG 60.612 55.000 4.29 0.00 0.00 4.00
2060 5263 0.611896 GGGTGCCATGCTTAAGGTGT 60.612 55.000 4.29 0.00 0.00 4.16
2061 5264 1.256812 GGTGCCATGCTTAAGGTGTT 58.743 50.000 4.29 0.00 0.00 3.32
2062 5265 1.067635 GGTGCCATGCTTAAGGTGTTG 60.068 52.381 4.29 0.00 0.00 3.33
2063 5266 1.067635 GTGCCATGCTTAAGGTGTTGG 60.068 52.381 4.29 0.00 0.00 3.77
2064 5267 1.202989 TGCCATGCTTAAGGTGTTGGA 60.203 47.619 4.29 0.00 0.00 3.53
2065 5268 1.892474 GCCATGCTTAAGGTGTTGGAA 59.108 47.619 4.29 0.00 0.00 3.53
2066 5269 2.298729 GCCATGCTTAAGGTGTTGGAAA 59.701 45.455 4.29 0.00 0.00 3.13
2081 5284 5.134202 GTTGGAAACCTTGTGGAAATAGG 57.866 43.478 0.00 0.00 42.21 2.57
2082 5285 4.463050 TGGAAACCTTGTGGAAATAGGT 57.537 40.909 0.00 0.00 43.98 3.08
2095 5483 8.746052 TGTGGAAATAGGTAAATACATCTTGG 57.254 34.615 0.00 0.00 0.00 3.61
2097 5485 9.574516 GTGGAAATAGGTAAATACATCTTGGAT 57.425 33.333 0.00 0.00 0.00 3.41
2098 5486 9.793259 TGGAAATAGGTAAATACATCTTGGATC 57.207 33.333 0.00 0.00 0.00 3.36
2117 5854 7.071069 TGGATCAAGATACATCTGCTTGTAT 57.929 36.000 0.00 7.09 43.70 2.29
2127 5864 4.940046 ACATCTGCTTGTATCACCAAAGAG 59.060 41.667 0.00 0.00 0.00 2.85
2132 5869 3.557595 GCTTGTATCACCAAAGAGGATCG 59.442 47.826 0.00 0.00 42.67 3.69
2134 5871 5.605534 CTTGTATCACCAAAGAGGATCGAT 58.394 41.667 0.00 0.00 42.67 3.59
2135 5872 5.614324 TGTATCACCAAAGAGGATCGATT 57.386 39.130 0.00 0.00 42.67 3.34
2138 5875 6.538742 TGTATCACCAAAGAGGATCGATTTTC 59.461 38.462 0.00 0.36 42.67 2.29
2139 5876 4.905429 TCACCAAAGAGGATCGATTTTCA 58.095 39.130 0.00 0.00 42.67 2.69
2140 5877 4.937620 TCACCAAAGAGGATCGATTTTCAG 59.062 41.667 0.00 0.00 42.67 3.02
2143 5880 5.046304 ACCAAAGAGGATCGATTTTCAGAGA 60.046 40.000 0.00 0.00 42.67 3.10
2144 5881 5.293079 CCAAAGAGGATCGATTTTCAGAGAC 59.707 44.000 0.00 0.00 42.67 3.36
2145 5882 4.664150 AGAGGATCGATTTTCAGAGACC 57.336 45.455 0.00 0.00 42.67 3.85
2147 5884 2.101582 AGGATCGATTTTCAGAGACCCG 59.898 50.000 0.00 0.00 0.00 5.28
2149 5886 3.067742 GGATCGATTTTCAGAGACCCGTA 59.932 47.826 0.00 0.00 0.00 4.02
2150 5887 4.441079 GGATCGATTTTCAGAGACCCGTAA 60.441 45.833 0.00 0.00 0.00 3.18
2152 5889 5.080969 TCGATTTTCAGAGACCCGTAAAT 57.919 39.130 0.00 0.00 0.00 1.40
2153 5890 5.484715 TCGATTTTCAGAGACCCGTAAATT 58.515 37.500 0.00 0.00 0.00 1.82
2154 5891 5.350365 TCGATTTTCAGAGACCCGTAAATTG 59.650 40.000 0.00 0.00 0.00 2.32
2155 5892 5.447279 CGATTTTCAGAGACCCGTAAATTGG 60.447 44.000 0.00 0.00 0.00 3.16
2245 7338 3.032459 TGTTGCCACTATATACGTCCCA 58.968 45.455 0.00 0.00 0.00 4.37
2313 7413 2.195096 TCACAAACTTACCACGTCACG 58.805 47.619 0.00 0.00 0.00 4.35
2316 7416 3.062369 CACAAACTTACCACGTCACGAAA 59.938 43.478 2.91 0.00 0.00 3.46
2318 7418 4.201744 ACAAACTTACCACGTCACGAAAAG 60.202 41.667 2.91 4.16 0.00 2.27
2548 7657 5.803237 ACTTCCTAAAAGAAGGACGAAGA 57.197 39.130 6.28 0.00 45.49 2.87
2637 7746 2.348411 CCAACATTGGCTAGGGTAGG 57.652 55.000 0.00 0.00 42.21 3.18
2638 7747 1.843851 CCAACATTGGCTAGGGTAGGA 59.156 52.381 0.00 0.00 42.21 2.94
3003 8120 3.003068 GGAATTCACATTGGCTGAGATCG 59.997 47.826 7.93 0.00 0.00 3.69
3171 8288 1.878102 CGCCTTTACTTGCTCCACACT 60.878 52.381 0.00 0.00 0.00 3.55
3293 8410 2.094182 GGACGCTGAAGAGTTCATACCA 60.094 50.000 0.00 0.00 39.30 3.25
3699 13792 9.841880 GAGGTCAAGAAAATAATAACCAAAGAC 57.158 33.333 0.00 0.00 0.00 3.01
3747 14088 9.527157 TGTTTGAATTACCATGGAATTCTCTAA 57.473 29.630 29.53 22.70 41.75 2.10
3876 14222 1.612156 CGATCGCGATGGAGATTCTC 58.388 55.000 29.09 8.52 40.82 2.87
3879 14225 2.959507 TCGCGATGGAGATTCTCAAA 57.040 45.000 15.36 3.62 31.08 2.69
3883 14229 5.356426 TCGCGATGGAGATTCTCAAAATTA 58.644 37.500 15.36 0.00 31.08 1.40
3884 14230 5.815222 TCGCGATGGAGATTCTCAAAATTAA 59.185 36.000 15.36 0.00 31.08 1.40
3885 14231 6.315144 TCGCGATGGAGATTCTCAAAATTAAA 59.685 34.615 15.36 0.00 31.08 1.52
3886 14232 6.966632 CGCGATGGAGATTCTCAAAATTAAAA 59.033 34.615 15.36 0.00 31.08 1.52
3888 14234 9.305925 GCGATGGAGATTCTCAAAATTAAAAAT 57.694 29.630 15.36 0.00 31.08 1.82
3935 14283 2.740981 GCTCCTCTTAATGATGCCATCG 59.259 50.000 0.00 0.00 31.40 3.84
3936 14284 3.805108 GCTCCTCTTAATGATGCCATCGT 60.805 47.826 0.00 0.00 31.40 3.73
3937 14285 3.993081 CTCCTCTTAATGATGCCATCGTC 59.007 47.826 0.00 0.00 31.40 4.20
3938 14286 3.070018 CCTCTTAATGATGCCATCGTCC 58.930 50.000 0.00 0.00 31.40 4.79
3939 14287 3.244353 CCTCTTAATGATGCCATCGTCCT 60.244 47.826 0.00 0.00 31.40 3.85
3940 14288 3.732212 TCTTAATGATGCCATCGTCCTG 58.268 45.455 0.00 0.00 31.40 3.86
3941 14289 2.549064 TAATGATGCCATCGTCCTGG 57.451 50.000 0.00 0.00 39.45 4.45
3942 14290 0.179009 AATGATGCCATCGTCCTGGG 60.179 55.000 0.00 0.00 36.75 4.45
3943 14291 2.060567 ATGATGCCATCGTCCTGGGG 62.061 60.000 0.00 0.00 36.75 4.96
3944 14292 4.195334 ATGCCATCGTCCTGGGGC 62.195 66.667 4.18 4.18 46.58 5.80
3946 14294 4.864334 GCCATCGTCCTGGGGCTG 62.864 72.222 3.93 0.00 43.09 4.85
3947 14295 3.402681 CCATCGTCCTGGGGCTGT 61.403 66.667 0.00 0.00 32.28 4.40
3948 14296 2.671070 CATCGTCCTGGGGCTGTT 59.329 61.111 0.00 0.00 0.00 3.16
3949 14297 1.746615 CATCGTCCTGGGGCTGTTG 60.747 63.158 0.00 0.00 0.00 3.33
3950 14298 1.918293 ATCGTCCTGGGGCTGTTGA 60.918 57.895 0.00 0.00 0.00 3.18
3951 14299 2.185310 ATCGTCCTGGGGCTGTTGAC 62.185 60.000 0.00 0.00 0.00 3.18
3952 14300 2.836154 GTCCTGGGGCTGTTGACA 59.164 61.111 0.00 0.00 0.00 3.58
3953 14301 1.380302 GTCCTGGGGCTGTTGACAT 59.620 57.895 0.00 0.00 0.00 3.06
3954 14302 0.678048 GTCCTGGGGCTGTTGACATC 60.678 60.000 0.00 0.00 0.00 3.06
3955 14303 1.379044 CCTGGGGCTGTTGACATCC 60.379 63.158 0.00 0.00 0.00 3.51
3956 14304 1.746615 CTGGGGCTGTTGACATCCG 60.747 63.158 0.00 0.00 33.13 4.18
3957 14305 2.184020 CTGGGGCTGTTGACATCCGA 62.184 60.000 0.00 0.00 33.13 4.55
3958 14306 1.450312 GGGGCTGTTGACATCCGAG 60.450 63.158 0.00 0.00 33.13 4.63
3959 14307 1.596934 GGGCTGTTGACATCCGAGA 59.403 57.895 0.00 0.00 33.13 4.04
3960 14308 0.179000 GGGCTGTTGACATCCGAGAT 59.821 55.000 0.00 0.00 33.13 2.75
3961 14309 1.407437 GGGCTGTTGACATCCGAGATT 60.407 52.381 0.00 0.00 33.13 2.40
3962 14310 2.158957 GGGCTGTTGACATCCGAGATTA 60.159 50.000 0.00 0.00 33.13 1.75
3963 14311 2.866762 GGCTGTTGACATCCGAGATTAC 59.133 50.000 0.00 0.00 0.00 1.89
3964 14312 2.866762 GCTGTTGACATCCGAGATTACC 59.133 50.000 0.00 0.00 0.00 2.85
3965 14313 3.678806 GCTGTTGACATCCGAGATTACCA 60.679 47.826 0.00 0.00 0.00 3.25
3966 14314 3.857052 TGTTGACATCCGAGATTACCAC 58.143 45.455 0.00 0.00 0.00 4.16
3967 14315 3.195661 GTTGACATCCGAGATTACCACC 58.804 50.000 0.00 0.00 0.00 4.61
3968 14316 1.760613 TGACATCCGAGATTACCACCC 59.239 52.381 0.00 0.00 0.00 4.61
3969 14317 1.070289 GACATCCGAGATTACCACCCC 59.930 57.143 0.00 0.00 0.00 4.95
3970 14318 1.128200 CATCCGAGATTACCACCCCA 58.872 55.000 0.00 0.00 0.00 4.96
3971 14319 1.699634 CATCCGAGATTACCACCCCAT 59.300 52.381 0.00 0.00 0.00 4.00
3972 14320 1.420430 TCCGAGATTACCACCCCATC 58.580 55.000 0.00 0.00 0.00 3.51
3973 14321 1.128200 CCGAGATTACCACCCCATCA 58.872 55.000 0.00 0.00 0.00 3.07
3974 14322 1.070758 CCGAGATTACCACCCCATCAG 59.929 57.143 0.00 0.00 0.00 2.90
3975 14323 1.541233 CGAGATTACCACCCCATCAGC 60.541 57.143 0.00 0.00 0.00 4.26
3976 14324 1.771255 GAGATTACCACCCCATCAGCT 59.229 52.381 0.00 0.00 0.00 4.24
3977 14325 2.173569 GAGATTACCACCCCATCAGCTT 59.826 50.000 0.00 0.00 0.00 3.74
3978 14326 2.092212 AGATTACCACCCCATCAGCTTG 60.092 50.000 0.00 0.00 0.00 4.01
3979 14327 0.331278 TTACCACCCCATCAGCTTGG 59.669 55.000 0.00 0.00 36.46 3.61
3980 14328 0.844661 TACCACCCCATCAGCTTGGT 60.845 55.000 8.91 8.91 43.17 3.67
3981 14329 1.679977 CCACCCCATCAGCTTGGTG 60.680 63.158 3.76 6.45 46.22 4.17
3982 14330 2.036256 ACCCCATCAGCTTGGTGC 59.964 61.111 3.76 0.00 43.29 5.01
3992 14340 3.472263 GCTTGGTGCGTAGTTTTGG 57.528 52.632 0.00 0.00 0.00 3.28
3993 14341 0.039527 GCTTGGTGCGTAGTTTTGGG 60.040 55.000 0.00 0.00 0.00 4.12
3994 14342 1.600023 CTTGGTGCGTAGTTTTGGGA 58.400 50.000 0.00 0.00 0.00 4.37
3995 14343 1.950909 CTTGGTGCGTAGTTTTGGGAA 59.049 47.619 0.00 0.00 0.00 3.97
3996 14344 2.054232 TGGTGCGTAGTTTTGGGAAA 57.946 45.000 0.00 0.00 0.00 3.13
3997 14345 2.376109 TGGTGCGTAGTTTTGGGAAAA 58.624 42.857 0.00 0.00 0.00 2.29
3998 14346 2.758979 TGGTGCGTAGTTTTGGGAAAAA 59.241 40.909 0.00 0.00 31.13 1.94
4019 14367 5.743636 AAATCTTTAAAAGCTGATGGCCA 57.256 34.783 8.56 8.56 43.05 5.36
4020 14368 5.945144 AATCTTTAAAAGCTGATGGCCAT 57.055 34.783 20.96 20.96 43.05 4.40
4021 14369 5.945144 ATCTTTAAAAGCTGATGGCCATT 57.055 34.783 21.84 5.06 43.05 3.16
4022 14370 5.075858 TCTTTAAAAGCTGATGGCCATTG 57.924 39.130 21.84 16.79 43.05 2.82
4023 14371 3.891422 TTAAAAGCTGATGGCCATTGG 57.109 42.857 21.84 16.34 43.05 3.16
4024 14372 1.941377 AAAAGCTGATGGCCATTGGA 58.059 45.000 21.84 6.27 43.05 3.53
4025 14373 1.481871 AAAGCTGATGGCCATTGGAG 58.518 50.000 21.84 16.72 43.05 3.86
4026 14374 1.041447 AAGCTGATGGCCATTGGAGC 61.041 55.000 26.48 26.48 43.05 4.70
4027 14375 1.755395 GCTGATGGCCATTGGAGCA 60.755 57.895 27.82 18.07 34.27 4.26
4028 14376 1.324740 GCTGATGGCCATTGGAGCAA 61.325 55.000 27.82 8.55 34.27 3.91
4029 14377 1.410004 CTGATGGCCATTGGAGCAAT 58.590 50.000 21.84 0.00 34.04 3.56
4030 14378 2.589720 CTGATGGCCATTGGAGCAATA 58.410 47.619 21.84 0.00 32.35 1.90
4031 14379 2.960384 CTGATGGCCATTGGAGCAATAA 59.040 45.455 21.84 0.00 32.35 1.40
4032 14380 3.576982 CTGATGGCCATTGGAGCAATAAT 59.423 43.478 21.84 0.00 32.35 1.28
4033 14381 4.738685 TGATGGCCATTGGAGCAATAATA 58.261 39.130 21.84 0.00 32.35 0.98
4034 14382 5.335261 TGATGGCCATTGGAGCAATAATAT 58.665 37.500 21.84 0.00 32.35 1.28
4035 14383 5.781306 TGATGGCCATTGGAGCAATAATATT 59.219 36.000 21.84 0.00 32.35 1.28
4036 14384 5.471556 TGGCCATTGGAGCAATAATATTG 57.528 39.130 0.00 8.55 32.35 1.90
4037 14385 4.900652 TGGCCATTGGAGCAATAATATTGT 59.099 37.500 13.77 2.08 32.35 2.71
4038 14386 5.010922 TGGCCATTGGAGCAATAATATTGTC 59.989 40.000 13.77 9.86 32.35 3.18
4039 14387 5.244626 GGCCATTGGAGCAATAATATTGTCT 59.755 40.000 13.77 11.06 32.35 3.41
4040 14388 6.434028 GGCCATTGGAGCAATAATATTGTCTA 59.566 38.462 13.77 6.29 32.35 2.59
4072 14420 4.911901 GGCACACCTTTGTACCCA 57.088 55.556 0.00 0.00 33.38 4.51
4085 14433 5.047377 CCTTTGTACCCATTTACTTGTGCAT 60.047 40.000 0.00 0.00 0.00 3.96
4230 14582 4.649705 TGGACTCCCCCGGCAAGA 62.650 66.667 0.00 0.00 0.00 3.02
4231 14677 3.787001 GGACTCCCCCGGCAAGAG 61.787 72.222 10.96 10.96 0.00 2.85
4325 14893 2.421388 CCACATTGGAATTAGGGCTCGA 60.421 50.000 0.00 0.00 40.96 4.04
4373 14941 7.094634 GCAAATCTTTGTCAAGACCATAGAGAA 60.095 37.037 4.71 0.00 42.05 2.87
4386 14954 9.599056 AAGACCATAGAGAAATGAGATCAGATA 57.401 33.333 0.00 0.00 0.00 1.98
4397 14965 9.388506 GAAATGAGATCAGATAAGAACCAGAAA 57.611 33.333 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 6.154445 GGATAGTTCGGTCTTATTAATCGCA 58.846 40.000 0.00 0.00 0.00 5.10
23 24 8.583810 TTTGGATAGTTCGGTCTTATTAATCG 57.416 34.615 0.00 0.00 0.00 3.34
77 78 4.495844 GCCACAATGCTACGGTAGAATTTC 60.496 45.833 17.07 5.41 31.54 2.17
85 86 0.253044 AGATGCCACAATGCTACGGT 59.747 50.000 0.00 0.00 0.00 4.83
86 87 0.659427 CAGATGCCACAATGCTACGG 59.341 55.000 0.00 0.00 0.00 4.02
130 133 6.090129 ACGGAACATCAAATAAATTTGGACG 58.910 36.000 13.89 11.56 45.39 4.79
150 153 5.766150 AGTTTGATCAATGTTTTGACGGA 57.234 34.783 9.40 0.00 44.36 4.69
155 161 7.965107 GCTCCTACTAGTTTGATCAATGTTTTG 59.035 37.037 9.40 1.11 0.00 2.44
169 175 4.048970 TCCTTCACTGCTCCTACTAGTT 57.951 45.455 0.00 0.00 0.00 2.24
202 208 6.848800 CACAAGAAAAATTGCACACATCAATG 59.151 34.615 0.00 0.00 34.67 2.82
399 475 6.183360 CGACTAAATCCATCTCTAACTGACCA 60.183 42.308 0.00 0.00 0.00 4.02
497 574 1.134788 AGCGTTGAACCCCTTATCTCG 60.135 52.381 0.00 0.00 0.00 4.04
505 596 4.004982 TGTTTTAGATAGCGTTGAACCCC 58.995 43.478 0.00 0.00 0.00 4.95
519 610 9.796062 GAATGAATTACGTACGTTTGTTTTAGA 57.204 29.630 27.92 1.29 0.00 2.10
545 636 8.341173 GCTGATCCATTAAAACTGAGAGTTATG 58.659 37.037 0.00 0.00 37.47 1.90
703 2848 3.719268 ACATCATGGGCAAGACAACTA 57.281 42.857 0.00 0.00 0.00 2.24
752 2898 8.539674 GTTAGGTGCTTTATGAACTTTTTGTTG 58.460 33.333 0.00 0.00 39.30 3.33
1076 3243 9.669353 CATTCACAGTGAAGCAATAATAATACC 57.331 33.333 20.55 0.00 40.05 2.73
1157 3324 0.464036 GTGTCCGATGATGGGCAGTA 59.536 55.000 0.00 0.00 46.10 2.74
1363 3530 1.532868 GCCATACAAGATGATGTCGGC 59.467 52.381 5.41 5.41 41.76 5.54
1563 4764 2.353704 CCTAGTGACAATCTTGGTCGCA 60.354 50.000 8.56 0.00 45.70 5.10
1582 4783 3.338250 TCAGGGCCCGCAATTCCT 61.338 61.111 18.44 0.00 0.00 3.36
1596 4797 5.463724 GGCTTCCTATCGTATTTCAAGTCAG 59.536 44.000 0.00 0.00 0.00 3.51
1614 4817 3.244181 TGCTTTCCAATTTCAAGGCTTCC 60.244 43.478 0.00 0.00 0.00 3.46
1654 4857 3.810386 CGTGCTGCTGACTAGTCTATCTA 59.190 47.826 23.01 2.10 0.00 1.98
1655 4858 2.616376 CGTGCTGCTGACTAGTCTATCT 59.384 50.000 23.01 0.00 0.00 1.98
1656 4859 2.287308 CCGTGCTGCTGACTAGTCTATC 60.287 54.545 23.01 12.32 0.00 2.08
1657 4860 1.678627 CCGTGCTGCTGACTAGTCTAT 59.321 52.381 23.01 0.00 0.00 1.98
1658 4861 1.095600 CCGTGCTGCTGACTAGTCTA 58.904 55.000 23.01 9.26 0.00 2.59
1659 4862 1.599606 CCCGTGCTGCTGACTAGTCT 61.600 60.000 23.01 0.00 0.00 3.24
1660 4863 1.153745 CCCGTGCTGCTGACTAGTC 60.154 63.158 16.32 16.32 0.00 2.59
1661 4864 2.973899 CCCGTGCTGCTGACTAGT 59.026 61.111 0.00 0.00 0.00 2.57
1662 4865 2.510238 GCCCGTGCTGCTGACTAG 60.510 66.667 0.00 0.00 33.53 2.57
1673 4876 2.432444 TGTCTCCAAAATTAGCCCGTG 58.568 47.619 0.00 0.00 0.00 4.94
1674 4877 2.871096 TGTCTCCAAAATTAGCCCGT 57.129 45.000 0.00 0.00 0.00 5.28
1675 4878 2.223572 GCATGTCTCCAAAATTAGCCCG 60.224 50.000 0.00 0.00 0.00 6.13
1676 4879 3.026694 AGCATGTCTCCAAAATTAGCCC 58.973 45.455 0.00 0.00 0.00 5.19
1677 4880 4.640201 TGTAGCATGTCTCCAAAATTAGCC 59.360 41.667 0.00 0.00 0.00 3.93
1678 4881 5.818136 TGTAGCATGTCTCCAAAATTAGC 57.182 39.130 0.00 0.00 0.00 3.09
1679 4882 9.330063 TCTATTGTAGCATGTCTCCAAAATTAG 57.670 33.333 0.00 0.00 0.00 1.73
1680 4883 9.679661 TTCTATTGTAGCATGTCTCCAAAATTA 57.320 29.630 0.00 0.00 0.00 1.40
1681 4884 8.579850 TTCTATTGTAGCATGTCTCCAAAATT 57.420 30.769 0.00 0.00 0.00 1.82
1682 4885 7.831193 ACTTCTATTGTAGCATGTCTCCAAAAT 59.169 33.333 0.00 0.00 0.00 1.82
1683 4886 7.168219 ACTTCTATTGTAGCATGTCTCCAAAA 58.832 34.615 0.00 0.00 0.00 2.44
1684 4887 6.711277 ACTTCTATTGTAGCATGTCTCCAAA 58.289 36.000 0.00 0.00 0.00 3.28
1685 4888 6.299805 ACTTCTATTGTAGCATGTCTCCAA 57.700 37.500 0.00 0.00 0.00 3.53
1686 4889 5.939764 ACTTCTATTGTAGCATGTCTCCA 57.060 39.130 0.00 0.00 0.00 3.86
1687 4890 6.183360 TGGTACTTCTATTGTAGCATGTCTCC 60.183 42.308 0.00 0.00 41.52 3.71
1688 4891 6.806751 TGGTACTTCTATTGTAGCATGTCTC 58.193 40.000 0.00 0.00 41.52 3.36
1689 4892 6.791867 TGGTACTTCTATTGTAGCATGTCT 57.208 37.500 0.00 0.00 41.52 3.41
1690 4893 7.519008 GCATTGGTACTTCTATTGTAGCATGTC 60.519 40.741 6.62 0.00 44.37 3.06
1691 4894 6.260936 GCATTGGTACTTCTATTGTAGCATGT 59.739 38.462 6.62 0.00 44.37 3.21
1692 4895 6.293626 GGCATTGGTACTTCTATTGTAGCATG 60.294 42.308 6.62 0.00 44.37 4.06
1693 4896 5.765182 GGCATTGGTACTTCTATTGTAGCAT 59.235 40.000 6.62 0.00 44.37 3.79
1694 4897 5.123227 GGCATTGGTACTTCTATTGTAGCA 58.877 41.667 0.00 0.00 43.66 3.49
1695 4898 5.123227 TGGCATTGGTACTTCTATTGTAGC 58.877 41.667 0.00 0.00 38.45 3.58
1696 4899 7.807977 AATGGCATTGGTACTTCTATTGTAG 57.192 36.000 12.82 0.00 0.00 2.74
1697 4900 9.860650 ATAAATGGCATTGGTACTTCTATTGTA 57.139 29.630 14.47 0.00 0.00 2.41
1698 4901 8.766994 ATAAATGGCATTGGTACTTCTATTGT 57.233 30.769 14.47 0.00 0.00 2.71
1824 5027 9.139174 CCAATAAATCAATGTGTCTTTGGTAAC 57.861 33.333 0.00 0.00 0.00 2.50
1825 5028 8.310382 CCCAATAAATCAATGTGTCTTTGGTAA 58.690 33.333 0.00 0.00 31.34 2.85
1826 5029 7.453126 ACCCAATAAATCAATGTGTCTTTGGTA 59.547 33.333 0.00 0.00 31.34 3.25
1829 5032 6.091169 GCACCCAATAAATCAATGTGTCTTTG 59.909 38.462 0.00 0.00 0.00 2.77
1831 5034 5.245751 TGCACCCAATAAATCAATGTGTCTT 59.754 36.000 0.00 0.00 0.00 3.01
1832 5035 4.771577 TGCACCCAATAAATCAATGTGTCT 59.228 37.500 0.00 0.00 0.00 3.41
1835 5038 5.875910 ACATTGCACCCAATAAATCAATGTG 59.124 36.000 14.97 0.00 46.74 3.21
1837 5040 6.988622 AACATTGCACCCAATAAATCAATG 57.011 33.333 10.17 10.17 43.56 2.82
1839 5042 8.908786 TTAAAACATTGCACCCAATAAATCAA 57.091 26.923 0.00 0.00 39.60 2.57
1844 5047 7.276658 CGCTATTTAAAACATTGCACCCAATAA 59.723 33.333 0.00 0.00 39.60 1.40
1845 5048 6.754209 CGCTATTTAAAACATTGCACCCAATA 59.246 34.615 0.00 0.00 39.60 1.90
1847 5050 4.926238 CGCTATTTAAAACATTGCACCCAA 59.074 37.500 0.00 0.00 35.01 4.12
1848 5051 4.489810 CGCTATTTAAAACATTGCACCCA 58.510 39.130 0.00 0.00 0.00 4.51
1849 5052 3.862845 CCGCTATTTAAAACATTGCACCC 59.137 43.478 0.00 0.00 0.00 4.61
1850 5053 3.862845 CCCGCTATTTAAAACATTGCACC 59.137 43.478 0.00 0.00 0.00 5.01
1851 5054 3.305897 GCCCGCTATTTAAAACATTGCAC 59.694 43.478 0.00 0.00 0.00 4.57
1852 5055 3.194542 AGCCCGCTATTTAAAACATTGCA 59.805 39.130 0.00 0.00 0.00 4.08
1853 5056 3.780902 AGCCCGCTATTTAAAACATTGC 58.219 40.909 0.00 0.00 0.00 3.56
1854 5057 6.074356 GCAATAGCCCGCTATTTAAAACATTG 60.074 38.462 17.30 8.45 44.18 2.82
1855 5058 5.983118 GCAATAGCCCGCTATTTAAAACATT 59.017 36.000 17.30 0.00 44.18 2.71
1856 5059 5.528870 GCAATAGCCCGCTATTTAAAACAT 58.471 37.500 17.30 0.00 44.18 2.71
1857 5060 4.927422 GCAATAGCCCGCTATTTAAAACA 58.073 39.130 17.30 0.00 44.18 2.83
1878 5081 2.518587 GGTCCGCCCCTATTTGGC 60.519 66.667 0.00 0.00 45.70 4.52
1879 5082 1.148498 GAGGTCCGCCCCTATTTGG 59.852 63.158 0.00 0.00 34.03 3.28
1880 5083 1.227556 CGAGGTCCGCCCCTATTTG 60.228 63.158 0.00 0.00 34.03 2.32
1881 5084 0.979187 TTCGAGGTCCGCCCCTATTT 60.979 55.000 0.00 0.00 38.37 1.40
1882 5085 0.979187 TTTCGAGGTCCGCCCCTATT 60.979 55.000 0.00 0.00 38.37 1.73
1883 5086 0.763223 ATTTCGAGGTCCGCCCCTAT 60.763 55.000 0.00 0.00 38.37 2.57
1884 5087 1.382146 ATTTCGAGGTCCGCCCCTA 60.382 57.895 0.00 0.00 38.37 3.53
1885 5088 2.687566 ATTTCGAGGTCCGCCCCT 60.688 61.111 0.00 0.00 38.37 4.79
1886 5089 2.203029 GATTTCGAGGTCCGCCCC 60.203 66.667 0.00 0.00 38.37 5.80
1887 5090 1.521681 CTGATTTCGAGGTCCGCCC 60.522 63.158 0.00 0.00 38.37 6.13
1888 5091 2.174319 GCTGATTTCGAGGTCCGCC 61.174 63.158 4.82 0.00 38.37 6.13
1889 5092 0.102481 TAGCTGATTTCGAGGTCCGC 59.898 55.000 0.00 7.22 38.37 5.54
1890 5093 2.802787 ATAGCTGATTTCGAGGTCCG 57.197 50.000 0.00 0.00 40.25 4.79
1891 5094 3.580731 GCTATAGCTGATTTCGAGGTCC 58.419 50.000 17.75 0.00 38.21 4.46
1892 5095 3.238441 CGCTATAGCTGATTTCGAGGTC 58.762 50.000 21.98 0.00 39.32 3.85
1893 5096 2.029828 CCGCTATAGCTGATTTCGAGGT 60.030 50.000 21.98 0.00 39.32 3.85
1894 5097 2.229062 TCCGCTATAGCTGATTTCGAGG 59.771 50.000 21.98 12.29 39.32 4.63
1895 5098 3.057876 ACTCCGCTATAGCTGATTTCGAG 60.058 47.826 21.98 16.37 39.32 4.04
1896 5099 2.885266 ACTCCGCTATAGCTGATTTCGA 59.115 45.455 21.98 7.47 39.32 3.71
1897 5100 3.290308 ACTCCGCTATAGCTGATTTCG 57.710 47.619 21.98 11.42 39.32 3.46
1898 5101 6.474102 GCTATAACTCCGCTATAGCTGATTTC 59.526 42.308 21.98 6.55 45.70 2.17
1899 5102 6.334202 GCTATAACTCCGCTATAGCTGATTT 58.666 40.000 21.98 20.94 45.70 2.17
1900 5103 5.449314 CGCTATAACTCCGCTATAGCTGATT 60.449 44.000 21.98 12.54 46.44 2.57
1901 5104 4.035792 CGCTATAACTCCGCTATAGCTGAT 59.964 45.833 21.98 9.85 46.44 2.90
1902 5105 3.374367 CGCTATAACTCCGCTATAGCTGA 59.626 47.826 21.98 19.24 46.44 4.26
1903 5106 3.487711 CCGCTATAACTCCGCTATAGCTG 60.488 52.174 21.98 15.96 46.44 4.24
1904 5107 2.683867 CCGCTATAACTCCGCTATAGCT 59.316 50.000 21.98 5.94 46.44 3.32
1905 5108 2.223525 CCCGCTATAACTCCGCTATAGC 60.224 54.545 15.09 15.09 45.71 2.97
1906 5109 2.223525 GCCCGCTATAACTCCGCTATAG 60.224 54.545 0.00 0.00 33.99 1.31
1907 5110 1.747355 GCCCGCTATAACTCCGCTATA 59.253 52.381 0.00 0.00 0.00 1.31
1908 5111 0.531200 GCCCGCTATAACTCCGCTAT 59.469 55.000 0.00 0.00 0.00 2.97
1909 5112 0.538977 AGCCCGCTATAACTCCGCTA 60.539 55.000 0.00 0.00 0.00 4.26
1910 5113 0.538977 TAGCCCGCTATAACTCCGCT 60.539 55.000 0.00 0.00 0.00 5.52
1911 5114 0.531200 ATAGCCCGCTATAACTCCGC 59.469 55.000 7.44 0.00 37.47 5.54
1912 5115 2.223525 GCTATAGCCCGCTATAACTCCG 60.224 54.545 14.13 6.69 39.94 4.63
1913 5116 2.758979 TGCTATAGCCCGCTATAACTCC 59.241 50.000 21.84 6.98 39.94 3.85
1914 5117 3.181485 CCTGCTATAGCCCGCTATAACTC 60.181 52.174 21.84 9.39 39.94 3.01
1915 5118 2.761208 CCTGCTATAGCCCGCTATAACT 59.239 50.000 21.84 0.00 39.94 2.24
1916 5119 2.738964 GCCTGCTATAGCCCGCTATAAC 60.739 54.545 21.84 12.29 39.94 1.89
1917 5120 1.480954 GCCTGCTATAGCCCGCTATAA 59.519 52.381 21.84 0.00 39.94 0.98
1918 5121 1.112113 GCCTGCTATAGCCCGCTATA 58.888 55.000 21.84 14.20 39.65 1.31
1919 5122 0.616111 AGCCTGCTATAGCCCGCTAT 60.616 55.000 25.96 13.46 40.93 2.97
1920 5123 0.039180 TAGCCTGCTATAGCCCGCTA 59.961 55.000 26.87 26.87 42.16 4.26
1921 5124 0.616111 ATAGCCTGCTATAGCCCGCT 60.616 55.000 28.43 28.43 43.69 5.52
1922 5125 1.067821 CTATAGCCTGCTATAGCCCGC 59.932 57.143 25.26 20.87 46.26 6.13
1928 5131 2.526888 ACCCGCTATAGCCTGCTATA 57.473 50.000 19.00 15.94 39.65 1.31
1929 5132 1.645710 AACCCGCTATAGCCTGCTAT 58.354 50.000 19.00 15.41 41.58 2.97
1930 5133 2.297698 TAACCCGCTATAGCCTGCTA 57.702 50.000 19.00 0.64 37.91 3.49
1931 5134 1.645710 ATAACCCGCTATAGCCTGCT 58.354 50.000 19.00 4.42 37.91 4.24
1932 5135 2.474410 AATAACCCGCTATAGCCTGC 57.526 50.000 19.00 0.00 37.91 4.85
1933 5136 3.740115 ACAAATAACCCGCTATAGCCTG 58.260 45.455 19.00 12.25 37.91 4.85
1934 5137 4.345837 TGTACAAATAACCCGCTATAGCCT 59.654 41.667 19.00 4.07 37.91 4.58
1935 5138 4.634199 TGTACAAATAACCCGCTATAGCC 58.366 43.478 19.00 1.80 37.91 3.93
1936 5139 5.121768 CCATGTACAAATAACCCGCTATAGC 59.878 44.000 15.09 15.09 37.78 2.97
1937 5140 5.642063 CCCATGTACAAATAACCCGCTATAG 59.358 44.000 0.00 0.00 0.00 1.31
1938 5141 5.307456 TCCCATGTACAAATAACCCGCTATA 59.693 40.000 0.00 0.00 0.00 1.31
1939 5142 4.103469 TCCCATGTACAAATAACCCGCTAT 59.897 41.667 0.00 0.00 0.00 2.97
1940 5143 3.455177 TCCCATGTACAAATAACCCGCTA 59.545 43.478 0.00 0.00 0.00 4.26
1941 5144 2.240160 TCCCATGTACAAATAACCCGCT 59.760 45.455 0.00 0.00 0.00 5.52
1942 5145 2.356695 GTCCCATGTACAAATAACCCGC 59.643 50.000 0.00 0.00 0.00 6.13
1943 5146 3.881220 AGTCCCATGTACAAATAACCCG 58.119 45.455 0.00 0.00 0.00 5.28
1944 5147 7.891498 AAATAGTCCCATGTACAAATAACCC 57.109 36.000 0.00 0.00 0.00 4.11
1945 5148 8.565416 GCTAAATAGTCCCATGTACAAATAACC 58.435 37.037 0.00 0.00 0.00 2.85
1946 5149 8.280497 CGCTAAATAGTCCCATGTACAAATAAC 58.720 37.037 0.00 0.00 0.00 1.89
1947 5150 7.442969 CCGCTAAATAGTCCCATGTACAAATAA 59.557 37.037 0.00 0.00 0.00 1.40
1948 5151 6.932400 CCGCTAAATAGTCCCATGTACAAATA 59.068 38.462 0.00 0.00 0.00 1.40
1949 5152 5.763204 CCGCTAAATAGTCCCATGTACAAAT 59.237 40.000 0.00 0.00 0.00 2.32
1950 5153 5.120399 CCGCTAAATAGTCCCATGTACAAA 58.880 41.667 0.00 0.00 0.00 2.83
1951 5154 4.699637 CCGCTAAATAGTCCCATGTACAA 58.300 43.478 0.00 0.00 0.00 2.41
1952 5155 3.493699 GCCGCTAAATAGTCCCATGTACA 60.494 47.826 0.00 0.00 0.00 2.90
1953 5156 3.064931 GCCGCTAAATAGTCCCATGTAC 58.935 50.000 0.00 0.00 0.00 2.90
1954 5157 2.701423 TGCCGCTAAATAGTCCCATGTA 59.299 45.455 0.00 0.00 0.00 2.29
1955 5158 1.488812 TGCCGCTAAATAGTCCCATGT 59.511 47.619 0.00 0.00 0.00 3.21
1956 5159 1.873591 GTGCCGCTAAATAGTCCCATG 59.126 52.381 0.00 0.00 0.00 3.66
1957 5160 1.202770 GGTGCCGCTAAATAGTCCCAT 60.203 52.381 0.00 0.00 0.00 4.00
1958 5161 0.179468 GGTGCCGCTAAATAGTCCCA 59.821 55.000 0.00 0.00 0.00 4.37
1959 5162 0.534427 GGGTGCCGCTAAATAGTCCC 60.534 60.000 0.00 0.00 0.00 4.46
1960 5163 0.468648 AGGGTGCCGCTAAATAGTCC 59.531 55.000 0.00 0.00 0.00 3.85
1961 5164 1.583054 CAGGGTGCCGCTAAATAGTC 58.417 55.000 0.00 0.00 0.00 2.59
1962 5165 0.463833 GCAGGGTGCCGCTAAATAGT 60.464 55.000 0.00 0.00 37.42 2.12
1963 5166 0.179045 AGCAGGGTGCCGCTAAATAG 60.179 55.000 0.00 0.00 46.52 1.73
1964 5167 0.463654 CAGCAGGGTGCCGCTAAATA 60.464 55.000 0.00 0.00 46.52 1.40
1965 5168 1.750399 CAGCAGGGTGCCGCTAAAT 60.750 57.895 0.00 0.00 46.52 1.40
1966 5169 2.359850 CAGCAGGGTGCCGCTAAA 60.360 61.111 0.00 0.00 46.52 1.85
1967 5170 2.404566 TTTCAGCAGGGTGCCGCTAA 62.405 55.000 0.00 0.00 46.52 3.09
1968 5171 2.404566 TTTTCAGCAGGGTGCCGCTA 62.405 55.000 0.00 0.00 46.52 4.26
1969 5172 3.790416 TTTTCAGCAGGGTGCCGCT 62.790 57.895 0.00 0.00 46.52 5.52
1970 5173 3.273080 CTTTTCAGCAGGGTGCCGC 62.273 63.158 0.00 0.00 46.52 6.53
1971 5174 2.629656 CCTTTTCAGCAGGGTGCCG 61.630 63.158 0.00 0.00 46.52 5.69
1972 5175 2.935740 GCCTTTTCAGCAGGGTGCC 61.936 63.158 0.00 0.00 46.52 5.01
1973 5176 0.609131 TAGCCTTTTCAGCAGGGTGC 60.609 55.000 2.17 0.00 42.32 5.01
1974 5177 2.134789 ATAGCCTTTTCAGCAGGGTG 57.865 50.000 2.17 0.00 42.32 4.61
1975 5178 4.505742 GCTATATAGCCTTTTCAGCAGGGT 60.506 45.833 22.02 0.00 44.56 4.34
1976 5179 4.006319 GCTATATAGCCTTTTCAGCAGGG 58.994 47.826 22.02 0.00 43.39 4.45
1977 5180 3.681897 CGCTATATAGCCTTTTCAGCAGG 59.318 47.826 25.48 6.35 46.34 4.85
1978 5181 3.681897 CCGCTATATAGCCTTTTCAGCAG 59.318 47.826 25.48 9.82 46.34 4.24
1979 5182 3.557054 CCCGCTATATAGCCTTTTCAGCA 60.557 47.826 25.48 0.00 46.34 4.41
1980 5183 3.003480 CCCGCTATATAGCCTTTTCAGC 58.997 50.000 25.48 3.90 46.34 4.26
1981 5184 4.273148 ACCCGCTATATAGCCTTTTCAG 57.727 45.455 25.48 11.73 46.34 3.02
1982 5185 4.699925 AACCCGCTATATAGCCTTTTCA 57.300 40.909 25.48 0.00 46.34 2.69
1983 5186 6.479331 GCTATAACCCGCTATATAGCCTTTTC 59.521 42.308 25.48 5.88 45.77 2.29
1984 5187 6.346896 GCTATAACCCGCTATATAGCCTTTT 58.653 40.000 25.48 17.86 45.77 2.27
1985 5188 5.915175 GCTATAACCCGCTATATAGCCTTT 58.085 41.667 25.48 18.15 45.77 3.11
1986 5189 5.532664 GCTATAACCCGCTATATAGCCTT 57.467 43.478 25.48 17.03 45.77 4.35
1989 5192 4.825546 TCGCTATAACCCGCTATATAGC 57.174 45.455 22.56 22.56 46.99 2.97
1990 5193 5.008811 AGCTTCGCTATAACCCGCTATATAG 59.991 44.000 5.30 5.30 36.99 1.31
1991 5194 4.885907 AGCTTCGCTATAACCCGCTATATA 59.114 41.667 0.00 0.00 36.99 0.86
1992 5195 3.700038 AGCTTCGCTATAACCCGCTATAT 59.300 43.478 0.00 0.00 36.99 0.86
1993 5196 3.087031 AGCTTCGCTATAACCCGCTATA 58.913 45.455 0.00 0.00 36.99 1.31
1994 5197 1.893801 AGCTTCGCTATAACCCGCTAT 59.106 47.619 0.00 0.00 36.99 2.97
1995 5198 1.325355 AGCTTCGCTATAACCCGCTA 58.675 50.000 0.00 0.00 36.99 4.26
1996 5199 1.325355 TAGCTTCGCTATAACCCGCT 58.675 50.000 0.00 0.00 40.44 5.52
1997 5200 3.879912 TAGCTTCGCTATAACCCGC 57.120 52.632 0.00 0.00 40.44 6.13
2005 5208 0.894184 AGCCGGCTATAGCTTCGCTA 60.894 55.000 31.86 0.00 45.55 4.26
2006 5209 0.894184 TAGCCGGCTATAGCTTCGCT 60.894 55.000 32.24 25.87 43.41 4.93
2007 5210 0.173708 ATAGCCGGCTATAGCTTCGC 59.826 55.000 41.03 20.23 40.56 4.70
2008 5211 2.656560 AATAGCCGGCTATAGCTTCG 57.343 50.000 41.53 18.50 40.56 3.79
2009 5212 6.204108 TGTTTTAAATAGCCGGCTATAGCTTC 59.796 38.462 41.53 29.16 40.56 3.86
2010 5213 6.059484 TGTTTTAAATAGCCGGCTATAGCTT 58.941 36.000 41.53 33.42 40.56 3.74
2011 5214 5.617252 TGTTTTAAATAGCCGGCTATAGCT 58.383 37.500 41.53 30.77 43.20 3.32
2012 5215 5.934935 TGTTTTAAATAGCCGGCTATAGC 57.065 39.130 41.53 29.25 38.20 2.97
2013 5216 8.094798 TCAATGTTTTAAATAGCCGGCTATAG 57.905 34.615 41.53 22.50 38.20 1.31
2014 5217 8.630054 ATCAATGTTTTAAATAGCCGGCTATA 57.370 30.769 41.53 28.18 38.20 1.31
2015 5218 6.952773 TCAATGTTTTAAATAGCCGGCTAT 57.047 33.333 37.79 37.79 40.63 2.97
2016 5219 6.952773 ATCAATGTTTTAAATAGCCGGCTA 57.047 33.333 36.88 36.88 0.00 3.93
2017 5220 5.852282 ATCAATGTTTTAAATAGCCGGCT 57.148 34.783 34.85 34.85 0.00 5.52
2018 5221 5.234116 CCAATCAATGTTTTAAATAGCCGGC 59.766 40.000 21.89 21.89 0.00 6.13
2019 5222 5.752955 CCCAATCAATGTTTTAAATAGCCGG 59.247 40.000 0.00 0.00 0.00 6.13
2020 5223 6.255453 CACCCAATCAATGTTTTAAATAGCCG 59.745 38.462 0.00 0.00 0.00 5.52
2021 5224 6.037062 GCACCCAATCAATGTTTTAAATAGCC 59.963 38.462 0.00 0.00 0.00 3.93
2022 5225 6.037062 GGCACCCAATCAATGTTTTAAATAGC 59.963 38.462 0.00 0.00 0.00 2.97
2023 5226 7.102346 TGGCACCCAATCAATGTTTTAAATAG 58.898 34.615 0.00 0.00 0.00 1.73
2024 5227 7.009179 TGGCACCCAATCAATGTTTTAAATA 57.991 32.000 0.00 0.00 0.00 1.40
2025 5228 5.874093 TGGCACCCAATCAATGTTTTAAAT 58.126 33.333 0.00 0.00 0.00 1.40
2026 5229 5.296151 TGGCACCCAATCAATGTTTTAAA 57.704 34.783 0.00 0.00 0.00 1.52
2027 5230 4.963318 TGGCACCCAATCAATGTTTTAA 57.037 36.364 0.00 0.00 0.00 1.52
2028 5231 4.829968 CATGGCACCCAATCAATGTTTTA 58.170 39.130 0.00 0.00 36.95 1.52
2029 5232 3.677190 CATGGCACCCAATCAATGTTTT 58.323 40.909 0.00 0.00 36.95 2.43
2030 5233 2.616001 GCATGGCACCCAATCAATGTTT 60.616 45.455 0.00 0.00 36.95 2.83
2031 5234 1.065998 GCATGGCACCCAATCAATGTT 60.066 47.619 0.00 0.00 36.95 2.71
2032 5235 0.538118 GCATGGCACCCAATCAATGT 59.462 50.000 0.00 0.00 36.95 2.71
2033 5236 0.828022 AGCATGGCACCCAATCAATG 59.172 50.000 0.00 0.00 36.95 2.82
2034 5237 1.575419 AAGCATGGCACCCAATCAAT 58.425 45.000 0.00 0.00 36.95 2.57
2035 5238 2.228545 TAAGCATGGCACCCAATCAA 57.771 45.000 0.00 0.00 36.95 2.57
2036 5239 2.101783 CTTAAGCATGGCACCCAATCA 58.898 47.619 0.00 0.00 36.95 2.57
2037 5240 1.410153 CCTTAAGCATGGCACCCAATC 59.590 52.381 0.00 0.00 36.95 2.67
2038 5241 1.273211 ACCTTAAGCATGGCACCCAAT 60.273 47.619 0.00 0.00 36.95 3.16
2039 5242 0.114168 ACCTTAAGCATGGCACCCAA 59.886 50.000 0.00 0.00 36.95 4.12
2040 5243 0.611618 CACCTTAAGCATGGCACCCA 60.612 55.000 0.00 0.00 38.19 4.51
2041 5244 0.611896 ACACCTTAAGCATGGCACCC 60.612 55.000 0.00 0.00 0.00 4.61
2042 5245 1.067635 CAACACCTTAAGCATGGCACC 60.068 52.381 0.00 0.00 0.00 5.01
2043 5246 1.067635 CCAACACCTTAAGCATGGCAC 60.068 52.381 0.00 0.00 0.00 5.01
2044 5247 1.202989 TCCAACACCTTAAGCATGGCA 60.203 47.619 0.00 0.00 0.00 4.92
2045 5248 1.544724 TCCAACACCTTAAGCATGGC 58.455 50.000 0.00 0.00 0.00 4.40
2046 5249 3.306019 GGTTTCCAACACCTTAAGCATGG 60.306 47.826 0.00 2.67 0.00 3.66
2047 5250 3.573967 AGGTTTCCAACACCTTAAGCATG 59.426 43.478 0.00 0.09 42.45 4.06
2048 5251 3.844640 AGGTTTCCAACACCTTAAGCAT 58.155 40.909 0.00 0.00 42.45 3.79
2049 5252 3.306472 AGGTTTCCAACACCTTAAGCA 57.694 42.857 0.00 0.00 42.45 3.91
2056 5259 1.770294 TCCACAAGGTTTCCAACACC 58.230 50.000 0.00 0.00 35.89 4.16
2057 5260 3.878160 TTTCCACAAGGTTTCCAACAC 57.122 42.857 0.00 0.00 35.89 3.32
2058 5261 4.586841 CCTATTTCCACAAGGTTTCCAACA 59.413 41.667 0.00 0.00 35.89 3.33
2059 5262 4.587262 ACCTATTTCCACAAGGTTTCCAAC 59.413 41.667 0.00 0.00 40.82 3.77
2060 5263 4.810345 ACCTATTTCCACAAGGTTTCCAA 58.190 39.130 0.00 0.00 40.82 3.53
2061 5264 4.463050 ACCTATTTCCACAAGGTTTCCA 57.537 40.909 0.00 0.00 40.82 3.53
2062 5265 6.904463 TTTACCTATTTCCACAAGGTTTCC 57.096 37.500 0.00 0.00 40.82 3.13
2063 5266 9.016438 TGTATTTACCTATTTCCACAAGGTTTC 57.984 33.333 0.00 0.00 40.82 2.78
2064 5267 8.943594 TGTATTTACCTATTTCCACAAGGTTT 57.056 30.769 0.00 0.00 40.82 3.27
2065 5268 9.185680 GATGTATTTACCTATTTCCACAAGGTT 57.814 33.333 0.00 0.00 40.82 3.50
2066 5269 8.557450 AGATGTATTTACCTATTTCCACAAGGT 58.443 33.333 0.00 0.00 45.53 3.50
2067 5270 8.980481 AGATGTATTTACCTATTTCCACAAGG 57.020 34.615 0.00 0.00 36.42 3.61
2105 5493 4.334759 CCTCTTTGGTGATACAAGCAGATG 59.665 45.833 0.00 0.00 0.00 2.90
2106 5494 4.225942 TCCTCTTTGGTGATACAAGCAGAT 59.774 41.667 0.00 0.00 37.07 2.90
2109 5497 4.517285 GATCCTCTTTGGTGATACAAGCA 58.483 43.478 0.00 0.00 37.07 3.91
2110 5498 3.557595 CGATCCTCTTTGGTGATACAAGC 59.442 47.826 0.00 0.00 37.07 4.01
2111 5499 5.011090 TCGATCCTCTTTGGTGATACAAG 57.989 43.478 0.00 0.00 37.07 3.16
2117 5854 4.905429 TGAAAATCGATCCTCTTTGGTGA 58.095 39.130 0.00 0.00 37.07 4.02
2120 5857 5.293079 GTCTCTGAAAATCGATCCTCTTTGG 59.707 44.000 0.00 0.00 37.10 3.28
2127 5864 2.159085 ACGGGTCTCTGAAAATCGATCC 60.159 50.000 0.00 0.00 0.00 3.36
2132 5869 5.163652 CCCAATTTACGGGTCTCTGAAAATC 60.164 44.000 0.00 0.00 39.05 2.17
2134 5871 4.076394 CCCAATTTACGGGTCTCTGAAAA 58.924 43.478 0.00 0.00 39.05 2.29
2135 5872 3.328343 TCCCAATTTACGGGTCTCTGAAA 59.672 43.478 0.00 0.00 44.81 2.69
2138 5875 2.906354 CTCCCAATTTACGGGTCTCTG 58.094 52.381 0.00 0.00 44.81 3.35
2139 5876 1.209747 GCTCCCAATTTACGGGTCTCT 59.790 52.381 0.00 0.00 44.81 3.10
2140 5877 1.209747 AGCTCCCAATTTACGGGTCTC 59.790 52.381 0.00 0.00 44.81 3.36
2143 5880 1.353022 TCAAGCTCCCAATTTACGGGT 59.647 47.619 0.00 0.00 44.81 5.28
2144 5881 2.122783 TCAAGCTCCCAATTTACGGG 57.877 50.000 0.00 0.00 46.03 5.28
2145 5882 7.148239 GGAATATATCAAGCTCCCAATTTACGG 60.148 40.741 0.00 0.00 0.00 4.02
2147 5884 8.515414 GTGGAATATATCAAGCTCCCAATTTAC 58.485 37.037 0.00 0.00 0.00 2.01
2149 5886 7.068702 TGTGGAATATATCAAGCTCCCAATTT 58.931 34.615 0.00 0.00 0.00 1.82
2150 5887 6.613699 TGTGGAATATATCAAGCTCCCAATT 58.386 36.000 0.00 0.00 0.00 2.32
2152 5889 5.645056 TGTGGAATATATCAAGCTCCCAA 57.355 39.130 0.00 0.00 0.00 4.12
2153 5890 5.848286 ATGTGGAATATATCAAGCTCCCA 57.152 39.130 0.00 0.00 0.00 4.37
2154 5891 6.944862 AGAAATGTGGAATATATCAAGCTCCC 59.055 38.462 0.00 0.00 0.00 4.30
2155 5892 7.992754 AGAAATGTGGAATATATCAAGCTCC 57.007 36.000 0.00 0.00 0.00 4.70
2157 5894 9.851686 TGTAAGAAATGTGGAATATATCAAGCT 57.148 29.630 0.00 0.00 0.00 3.74
2378 7482 8.699130 TGATGACATGTATCTTGAAGTATGAGT 58.301 33.333 0.00 0.00 0.00 3.41
2548 7657 2.173569 AGTGAGCTCCTGGAACAACTTT 59.826 45.455 12.15 0.00 38.70 2.66
2633 7742 4.581409 CCTCTTAAGCAGTCCTACTCCTAC 59.419 50.000 0.00 0.00 0.00 3.18
2634 7743 4.477581 TCCTCTTAAGCAGTCCTACTCCTA 59.522 45.833 0.00 0.00 0.00 2.94
2635 7744 3.269906 TCCTCTTAAGCAGTCCTACTCCT 59.730 47.826 0.00 0.00 0.00 3.69
2636 7745 3.633418 TCCTCTTAAGCAGTCCTACTCC 58.367 50.000 0.00 0.00 0.00 3.85
2637 7746 4.463186 TGTTCCTCTTAAGCAGTCCTACTC 59.537 45.833 0.00 0.00 0.00 2.59
2638 7747 4.417437 TGTTCCTCTTAAGCAGTCCTACT 58.583 43.478 0.00 0.00 0.00 2.57
3171 8288 0.038021 TTGCAGTCAGCCATAGCCAA 59.962 50.000 0.00 0.00 44.83 4.52
3293 8410 8.489489 TCACTGCCTTCATCTATAAATCTTTCT 58.511 33.333 0.00 0.00 0.00 2.52
3766 14107 9.264719 TCATTTCAGTTGTATGCATACTCATAG 57.735 33.333 31.35 19.37 34.41 2.23
3861 14207 4.542662 AATTTTGAGAATCTCCATCGCG 57.457 40.909 7.91 0.00 34.92 5.87
3879 14225 7.925483 TGCCATCGCTGCTATTTATTTTTAATT 59.075 29.630 0.00 0.00 35.36 1.40
3883 14229 5.067674 TCTGCCATCGCTGCTATTTATTTTT 59.932 36.000 0.00 0.00 35.36 1.94
3884 14230 4.580167 TCTGCCATCGCTGCTATTTATTTT 59.420 37.500 0.00 0.00 35.36 1.82
3885 14231 4.136796 TCTGCCATCGCTGCTATTTATTT 58.863 39.130 0.00 0.00 35.36 1.40
3886 14232 3.743521 TCTGCCATCGCTGCTATTTATT 58.256 40.909 0.00 0.00 35.36 1.40
3888 14234 2.548707 CCTCTGCCATCGCTGCTATTTA 60.549 50.000 0.00 0.00 35.36 1.40
3935 14283 0.678048 GATGTCAACAGCCCCAGGAC 60.678 60.000 0.00 0.00 0.00 3.85
3936 14284 1.685224 GATGTCAACAGCCCCAGGA 59.315 57.895 0.00 0.00 0.00 3.86
3937 14285 1.379044 GGATGTCAACAGCCCCAGG 60.379 63.158 6.14 0.00 46.17 4.45
3938 14286 4.326255 GGATGTCAACAGCCCCAG 57.674 61.111 6.14 0.00 46.17 4.45
3943 14291 2.866762 GGTAATCTCGGATGTCAACAGC 59.133 50.000 0.00 0.00 0.00 4.40
3944 14292 3.865745 GTGGTAATCTCGGATGTCAACAG 59.134 47.826 0.00 0.00 0.00 3.16
3945 14293 3.369052 GGTGGTAATCTCGGATGTCAACA 60.369 47.826 0.00 0.00 0.00 3.33
3946 14294 3.195661 GGTGGTAATCTCGGATGTCAAC 58.804 50.000 0.00 0.00 0.00 3.18
3947 14295 2.169769 GGGTGGTAATCTCGGATGTCAA 59.830 50.000 0.00 0.00 0.00 3.18
3948 14296 1.760613 GGGTGGTAATCTCGGATGTCA 59.239 52.381 0.00 0.00 0.00 3.58
3949 14297 1.070289 GGGGTGGTAATCTCGGATGTC 59.930 57.143 0.00 0.00 0.00 3.06
3950 14298 1.129058 GGGGTGGTAATCTCGGATGT 58.871 55.000 0.00 0.00 0.00 3.06
3951 14299 1.128200 TGGGGTGGTAATCTCGGATG 58.872 55.000 0.00 0.00 0.00 3.51
3952 14300 1.978580 GATGGGGTGGTAATCTCGGAT 59.021 52.381 0.00 0.00 0.00 4.18
3953 14301 1.343580 TGATGGGGTGGTAATCTCGGA 60.344 52.381 0.00 0.00 0.00 4.55
3954 14302 1.070758 CTGATGGGGTGGTAATCTCGG 59.929 57.143 0.00 0.00 0.00 4.63
3955 14303 1.541233 GCTGATGGGGTGGTAATCTCG 60.541 57.143 0.00 0.00 0.00 4.04
3956 14304 1.771255 AGCTGATGGGGTGGTAATCTC 59.229 52.381 0.00 0.00 0.00 2.75
3957 14305 1.898863 AGCTGATGGGGTGGTAATCT 58.101 50.000 0.00 0.00 0.00 2.40
3958 14306 2.301346 CAAGCTGATGGGGTGGTAATC 58.699 52.381 0.00 0.00 0.00 1.75
3959 14307 1.063717 CCAAGCTGATGGGGTGGTAAT 60.064 52.381 0.00 0.00 36.79 1.89
3960 14308 0.331278 CCAAGCTGATGGGGTGGTAA 59.669 55.000 0.00 0.00 36.79 2.85
3961 14309 0.844661 ACCAAGCTGATGGGGTGGTA 60.845 55.000 9.27 0.00 45.18 3.25
3962 14310 2.162906 ACCAAGCTGATGGGGTGGT 61.163 57.895 9.27 3.80 45.18 4.16
3963 14311 1.679977 CACCAAGCTGATGGGGTGG 60.680 63.158 9.27 3.13 45.48 4.61
3964 14312 4.007457 CACCAAGCTGATGGGGTG 57.993 61.111 9.27 8.10 45.18 4.61
3965 14313 2.036256 GCACCAAGCTGATGGGGT 59.964 61.111 8.49 0.00 46.16 4.95
3967 14315 1.078497 TACGCACCAAGCTGATGGG 60.078 57.895 9.27 8.24 45.18 4.00
3968 14316 0.391661 ACTACGCACCAAGCTGATGG 60.392 55.000 2.71 2.71 46.38 3.51
3969 14317 1.442769 AACTACGCACCAAGCTGATG 58.557 50.000 0.00 0.00 42.61 3.07
3970 14318 2.185004 AAACTACGCACCAAGCTGAT 57.815 45.000 0.00 0.00 42.61 2.90
3971 14319 1.601903 CAAAACTACGCACCAAGCTGA 59.398 47.619 0.00 0.00 42.61 4.26
3972 14320 1.334960 CCAAAACTACGCACCAAGCTG 60.335 52.381 0.00 0.00 42.61 4.24
3973 14321 0.951558 CCAAAACTACGCACCAAGCT 59.048 50.000 0.00 0.00 42.61 3.74
3974 14322 0.039527 CCCAAAACTACGCACCAAGC 60.040 55.000 0.00 0.00 40.87 4.01
3975 14323 1.600023 TCCCAAAACTACGCACCAAG 58.400 50.000 0.00 0.00 0.00 3.61
3976 14324 2.054232 TTCCCAAAACTACGCACCAA 57.946 45.000 0.00 0.00 0.00 3.67
3977 14325 2.054232 TTTCCCAAAACTACGCACCA 57.946 45.000 0.00 0.00 0.00 4.17
3978 14326 3.439895 TTTTTCCCAAAACTACGCACC 57.560 42.857 0.00 0.00 0.00 5.01
3995 14343 6.532826 TGGCCATCAGCTTTTAAAGATTTTT 58.467 32.000 0.00 0.00 43.05 1.94
3996 14344 6.112927 TGGCCATCAGCTTTTAAAGATTTT 57.887 33.333 0.00 0.00 43.05 1.82
3997 14345 5.743636 TGGCCATCAGCTTTTAAAGATTT 57.256 34.783 0.00 0.00 43.05 2.17
3998 14346 5.945144 ATGGCCATCAGCTTTTAAAGATT 57.055 34.783 14.09 0.00 43.05 2.40
3999 14347 5.395990 CCAATGGCCATCAGCTTTTAAAGAT 60.396 40.000 21.08 0.00 43.05 2.40
4000 14348 4.081531 CCAATGGCCATCAGCTTTTAAAGA 60.082 41.667 21.08 0.00 43.05 2.52
4001 14349 4.081531 TCCAATGGCCATCAGCTTTTAAAG 60.082 41.667 21.08 0.00 43.05 1.85
4002 14350 3.837146 TCCAATGGCCATCAGCTTTTAAA 59.163 39.130 21.08 0.00 43.05 1.52
4003 14351 3.439154 TCCAATGGCCATCAGCTTTTAA 58.561 40.909 21.08 0.00 43.05 1.52
4004 14352 3.025978 CTCCAATGGCCATCAGCTTTTA 58.974 45.455 21.08 0.00 43.05 1.52
4005 14353 1.829222 CTCCAATGGCCATCAGCTTTT 59.171 47.619 21.08 0.00 43.05 2.27
4006 14354 1.481871 CTCCAATGGCCATCAGCTTT 58.518 50.000 21.08 0.00 43.05 3.51
4007 14355 1.041447 GCTCCAATGGCCATCAGCTT 61.041 55.000 26.26 9.42 43.05 3.74
4008 14356 1.455217 GCTCCAATGGCCATCAGCT 60.455 57.895 26.26 9.06 43.05 4.24
4009 14357 1.324740 TTGCTCCAATGGCCATCAGC 61.325 55.000 26.59 26.59 42.60 4.26
4010 14358 1.410004 ATTGCTCCAATGGCCATCAG 58.590 50.000 21.08 16.05 32.39 2.90
4011 14359 2.752075 TATTGCTCCAATGGCCATCA 57.248 45.000 21.08 9.56 35.54 3.07
4012 14360 5.927281 ATATTATTGCTCCAATGGCCATC 57.073 39.130 21.08 6.55 35.54 3.51
4013 14361 5.544948 ACAATATTATTGCTCCAATGGCCAT 59.455 36.000 14.09 14.09 35.54 4.40
4014 14362 4.900652 ACAATATTATTGCTCCAATGGCCA 59.099 37.500 8.56 8.56 35.54 5.36
4015 14363 5.244626 AGACAATATTATTGCTCCAATGGCC 59.755 40.000 14.88 0.00 35.54 5.36
4016 14364 6.336842 AGACAATATTATTGCTCCAATGGC 57.663 37.500 14.88 0.00 35.54 4.40
4017 14365 9.017509 ACATAGACAATATTATTGCTCCAATGG 57.982 33.333 14.88 0.00 35.54 3.16
4030 14378 9.847224 CCCCTACTTTTGTACATAGACAATATT 57.153 33.333 11.31 0.00 39.04 1.28
4031 14379 7.937394 GCCCCTACTTTTGTACATAGACAATAT 59.063 37.037 11.31 0.00 39.04 1.28
4032 14380 7.092802 TGCCCCTACTTTTGTACATAGACAATA 60.093 37.037 11.31 0.00 39.04 1.90
4033 14381 6.120220 GCCCCTACTTTTGTACATAGACAAT 58.880 40.000 11.31 0.00 39.04 2.71
4034 14382 5.013287 TGCCCCTACTTTTGTACATAGACAA 59.987 40.000 11.31 0.00 37.54 3.18
4035 14383 4.532916 TGCCCCTACTTTTGTACATAGACA 59.467 41.667 11.31 1.71 0.00 3.41
4036 14384 4.874396 GTGCCCCTACTTTTGTACATAGAC 59.126 45.833 11.31 0.00 0.00 2.59
4037 14385 4.532916 TGTGCCCCTACTTTTGTACATAGA 59.467 41.667 11.31 0.00 0.00 1.98
4038 14386 4.634443 GTGTGCCCCTACTTTTGTACATAG 59.366 45.833 0.00 0.00 0.00 2.23
4039 14387 4.566070 GGTGTGCCCCTACTTTTGTACATA 60.566 45.833 0.00 0.00 0.00 2.29
4040 14388 3.418047 GTGTGCCCCTACTTTTGTACAT 58.582 45.455 0.00 0.00 0.00 2.29
4072 14420 2.493278 GACTGCCCATGCACAAGTAAAT 59.507 45.455 0.00 0.00 44.23 1.40
4105 14453 1.005037 CTGCTTAGTGTGGCCGTGA 60.005 57.895 0.00 0.00 0.00 4.35
4315 14883 2.058595 GGTGCCTCTCGAGCCCTAA 61.059 63.158 7.81 0.00 0.00 2.69
4373 14941 9.171877 GTTTTCTGGTTCTTATCTGATCTCATT 57.828 33.333 0.00 0.00 0.00 2.57
4386 14954 0.942252 GTCGCCGTTTTCTGGTTCTT 59.058 50.000 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.