Multiple sequence alignment - TraesCS2D01G018500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G018500 chr2D 100.000 3179 0 0 1 3179 8694970 8698148 0.000000e+00 5871.0
1 TraesCS2D01G018500 chr2D 83.607 1885 280 28 333 2204 9604387 9606255 0.000000e+00 1742.0
2 TraesCS2D01G018500 chr2D 82.785 1853 293 21 334 2179 19586656 19588489 0.000000e+00 1631.0
3 TraesCS2D01G018500 chr2D 97.872 47 0 1 3126 3172 645666373 645666328 2.630000e-11 80.5
4 TraesCS2D01G018500 chrUn 96.046 1492 46 6 948 2437 225597637 225596157 0.000000e+00 2416.0
5 TraesCS2D01G018500 chrUn 96.046 1492 46 6 948 2437 261780588 261782068 0.000000e+00 2416.0
6 TraesCS2D01G018500 chrUn 96.046 1492 46 6 948 2437 273226883 273225403 0.000000e+00 2416.0
7 TraesCS2D01G018500 chrUn 96.970 957 22 2 2 955 273228003 273227051 0.000000e+00 1600.0
8 TraesCS2D01G018500 chrUn 96.970 957 22 2 2 955 292881849 292882801 0.000000e+00 1600.0
9 TraesCS2D01G018500 chrUn 95.906 171 6 1 2595 2764 225596152 225595982 3.120000e-70 276.0
10 TraesCS2D01G018500 chrUn 95.906 171 6 1 2595 2764 261782073 261782243 3.120000e-70 276.0
11 TraesCS2D01G018500 chrUn 95.906 171 6 1 2595 2764 273225398 273225228 3.120000e-70 276.0
12 TraesCS2D01G018500 chr2B 83.241 1993 292 31 333 2300 11518677 11516702 0.000000e+00 1792.0
13 TraesCS2D01G018500 chr2B 83.667 1898 282 26 333 2220 12421954 12423833 0.000000e+00 1762.0
14 TraesCS2D01G018500 chr2B 85.270 1704 238 7 522 2224 768807173 768805482 0.000000e+00 1744.0
15 TraesCS2D01G018500 chr2B 84.927 1705 241 11 522 2224 768929593 768927903 0.000000e+00 1711.0
16 TraesCS2D01G018500 chr2B 92.440 291 9 5 1 288 11420675 11420955 1.370000e-108 403.0
17 TraesCS2D01G018500 chr7A 96.000 50 0 2 3123 3172 10422942 10422989 2.630000e-11 80.5
18 TraesCS2D01G018500 chr7B 100.000 42 0 0 3131 3172 579491009 579491050 9.450000e-11 78.7
19 TraesCS2D01G018500 chr6A 100.000 41 0 0 3132 3172 590370890 590370930 3.400000e-10 76.8
20 TraesCS2D01G018500 chr4B 100.000 41 0 0 3132 3172 39047179 39047139 3.400000e-10 76.8
21 TraesCS2D01G018500 chr2A 100.000 41 0 0 3132 3172 26933183 26933143 3.400000e-10 76.8
22 TraesCS2D01G018500 chr1D 100.000 41 0 0 3132 3172 66381017 66380977 3.400000e-10 76.8
23 TraesCS2D01G018500 chr1D 100.000 41 0 0 3132 3172 394818555 394818515 3.400000e-10 76.8
24 TraesCS2D01G018500 chr1A 100.000 40 0 0 3133 3172 556272583 556272544 1.220000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G018500 chr2D 8694970 8698148 3178 False 5871.000000 5871 100.000000 1 3179 1 chr2D.!!$F1 3178
1 TraesCS2D01G018500 chr2D 9604387 9606255 1868 False 1742.000000 1742 83.607000 333 2204 1 chr2D.!!$F2 1871
2 TraesCS2D01G018500 chr2D 19586656 19588489 1833 False 1631.000000 1631 82.785000 334 2179 1 chr2D.!!$F3 1845
3 TraesCS2D01G018500 chrUn 292881849 292882801 952 False 1600.000000 1600 96.970000 2 955 1 chrUn.!!$F1 953
4 TraesCS2D01G018500 chrUn 273225228 273228003 2775 True 1430.666667 2416 96.307333 2 2764 3 chrUn.!!$R2 2762
5 TraesCS2D01G018500 chrUn 225595982 225597637 1655 True 1346.000000 2416 95.976000 948 2764 2 chrUn.!!$R1 1816
6 TraesCS2D01G018500 chrUn 261780588 261782243 1655 False 1346.000000 2416 95.976000 948 2764 2 chrUn.!!$F2 1816
7 TraesCS2D01G018500 chr2B 11516702 11518677 1975 True 1792.000000 1792 83.241000 333 2300 1 chr2B.!!$R1 1967
8 TraesCS2D01G018500 chr2B 12421954 12423833 1879 False 1762.000000 1762 83.667000 333 2220 1 chr2B.!!$F2 1887
9 TraesCS2D01G018500 chr2B 768805482 768807173 1691 True 1744.000000 1744 85.270000 522 2224 1 chr2B.!!$R2 1702
10 TraesCS2D01G018500 chr2B 768927903 768929593 1690 True 1711.000000 1711 84.927000 522 2224 1 chr2B.!!$R3 1702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 832 0.035725 TGGTGAGGAGATTGCAGCAG 60.036 55.0 0.0 0.0 35.39 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2803 3013 0.10412 CATGGTCGTAGCCGGATTCA 59.896 55.0 5.05 0.0 33.95 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 2.350772 GGTTTGTCCATCAACAGAAGCG 60.351 50.000 0.00 0.00 35.61 4.68
126 127 1.360192 GCGCAACAGTTTTGAGCCT 59.640 52.632 0.30 0.00 38.91 4.58
324 328 0.249120 TGACGCCGTCATCTCCAAAT 59.751 50.000 17.22 0.00 37.67 2.32
476 481 3.371595 CCAACTAGTGTATTCCTTGGGGG 60.372 52.174 0.00 0.00 0.00 5.40
821 832 0.035725 TGGTGAGGAGATTGCAGCAG 60.036 55.000 0.00 0.00 35.39 4.24
977 1163 1.002468 CAAAACCTCCAAGACAGTGCG 60.002 52.381 0.00 0.00 0.00 5.34
1120 1307 3.092301 GGTGCCTTGGAAAGCTTAGAAT 58.908 45.455 0.00 0.00 44.44 2.40
1230 1417 1.238439 ACAACTTCATGTTCAGCCGG 58.762 50.000 0.00 0.00 36.63 6.13
1405 1594 2.610479 CGCTTCTCCTCTACTTTGCACA 60.610 50.000 0.00 0.00 0.00 4.57
1430 1619 1.340248 TGGAGACAACCTCTTGACGAC 59.660 52.381 0.00 0.00 41.66 4.34
1627 1816 5.644977 ACCTATTTTCCTAAGTGCTTTGC 57.355 39.130 0.00 0.00 0.00 3.68
1718 1907 7.333423 TCCACAACTAGTACAATTAACAGATGC 59.667 37.037 0.00 0.00 0.00 3.91
1719 1908 7.119116 CCACAACTAGTACAATTAACAGATGCA 59.881 37.037 0.00 0.00 0.00 3.96
1731 1920 2.250031 ACAGATGCATTTGCCAAGGAA 58.750 42.857 16.67 0.00 41.18 3.36
1891 2080 2.482839 GCACACCCAAGCAAGCTTAAAA 60.483 45.455 7.03 0.00 34.50 1.52
2040 2229 1.903183 AGTGTTAGGCCAGAAGGAGAC 59.097 52.381 5.01 0.00 36.89 3.36
2106 2295 9.934190 AAATCATTTGTTCATTTTGTTACAAGC 57.066 25.926 0.00 0.00 32.67 4.01
2109 2298 3.971150 TGTTCATTTTGTTACAAGCCGG 58.029 40.909 0.00 0.00 0.00 6.13
2179 2371 1.304952 CGGGGTGGGCCAATCTAAA 59.695 57.895 8.40 0.00 36.17 1.85
2183 2376 2.843730 GGGGTGGGCCAATCTAAATTTT 59.156 45.455 8.40 0.00 36.17 1.82
2287 2497 9.330063 TGAATTACAGATCTCAATCAATGTACC 57.670 33.333 0.00 0.00 34.07 3.34
2323 2533 5.530176 AAGTATTTGTTATGAGTGGGGGT 57.470 39.130 0.00 0.00 0.00 4.95
2324 2534 5.112129 AGTATTTGTTATGAGTGGGGGTC 57.888 43.478 0.00 0.00 0.00 4.46
2325 2535 2.891191 TTTGTTATGAGTGGGGGTCC 57.109 50.000 0.00 0.00 0.00 4.46
2326 2536 2.053747 TTGTTATGAGTGGGGGTCCT 57.946 50.000 0.00 0.00 0.00 3.85
2327 2537 2.953093 TGTTATGAGTGGGGGTCCTA 57.047 50.000 0.00 0.00 0.00 2.94
2328 2538 3.208570 TGTTATGAGTGGGGGTCCTAA 57.791 47.619 0.00 0.00 0.00 2.69
2329 2539 3.533146 TGTTATGAGTGGGGGTCCTAAA 58.467 45.455 0.00 0.00 0.00 1.85
2330 2540 4.116113 TGTTATGAGTGGGGGTCCTAAAT 58.884 43.478 0.00 0.00 0.00 1.40
2331 2541 5.290335 TGTTATGAGTGGGGGTCCTAAATA 58.710 41.667 0.00 0.00 0.00 1.40
2332 2542 5.732170 TGTTATGAGTGGGGGTCCTAAATAA 59.268 40.000 0.00 0.00 0.00 1.40
2333 2543 6.217900 TGTTATGAGTGGGGGTCCTAAATAAA 59.782 38.462 0.00 0.00 0.00 1.40
2334 2544 7.091720 TGTTATGAGTGGGGGTCCTAAATAAAT 60.092 37.037 0.00 0.00 0.00 1.40
2335 2545 5.806955 TGAGTGGGGGTCCTAAATAAATT 57.193 39.130 0.00 0.00 0.00 1.82
2336 2546 6.160483 TGAGTGGGGGTCCTAAATAAATTT 57.840 37.500 0.00 0.00 0.00 1.82
2337 2547 6.192044 TGAGTGGGGGTCCTAAATAAATTTC 58.808 40.000 0.00 0.00 0.00 2.17
2338 2548 6.160483 AGTGGGGGTCCTAAATAAATTTCA 57.840 37.500 0.00 0.00 0.00 2.69
2384 2594 4.437682 TTTATAGCATGGACAAGGGGAG 57.562 45.455 0.00 0.00 0.00 4.30
2430 2640 5.715439 TTATCAGATCCAACAATCCACCT 57.285 39.130 0.00 0.00 0.00 4.00
2437 2647 1.457346 CAACAATCCACCTCCTGCTC 58.543 55.000 0.00 0.00 0.00 4.26
2438 2648 1.004044 CAACAATCCACCTCCTGCTCT 59.996 52.381 0.00 0.00 0.00 4.09
2440 2650 2.551270 ACAATCCACCTCCTGCTCTTA 58.449 47.619 0.00 0.00 0.00 2.10
2441 2651 3.118531 ACAATCCACCTCCTGCTCTTAT 58.881 45.455 0.00 0.00 0.00 1.73
2442 2652 3.525199 ACAATCCACCTCCTGCTCTTATT 59.475 43.478 0.00 0.00 0.00 1.40
2443 2653 4.133078 CAATCCACCTCCTGCTCTTATTC 58.867 47.826 0.00 0.00 0.00 1.75
2444 2654 1.757118 TCCACCTCCTGCTCTTATTCG 59.243 52.381 0.00 0.00 0.00 3.34
2445 2655 1.757118 CCACCTCCTGCTCTTATTCGA 59.243 52.381 0.00 0.00 0.00 3.71
2446 2656 2.482142 CCACCTCCTGCTCTTATTCGAC 60.482 54.545 0.00 0.00 0.00 4.20
2447 2657 2.166459 CACCTCCTGCTCTTATTCGACA 59.834 50.000 0.00 0.00 0.00 4.35
2448 2658 2.832129 ACCTCCTGCTCTTATTCGACAA 59.168 45.455 0.00 0.00 0.00 3.18
2449 2659 3.452627 ACCTCCTGCTCTTATTCGACAAT 59.547 43.478 0.00 0.00 0.00 2.71
2450 2660 4.054671 CCTCCTGCTCTTATTCGACAATC 58.945 47.826 0.00 0.00 0.00 2.67
2451 2661 4.442052 CCTCCTGCTCTTATTCGACAATCA 60.442 45.833 0.00 0.00 0.00 2.57
2452 2662 5.084818 TCCTGCTCTTATTCGACAATCAA 57.915 39.130 0.00 0.00 0.00 2.57
2453 2663 4.870426 TCCTGCTCTTATTCGACAATCAAC 59.130 41.667 0.00 0.00 0.00 3.18
2454 2664 4.631377 CCTGCTCTTATTCGACAATCAACA 59.369 41.667 0.00 0.00 0.00 3.33
2455 2665 5.295292 CCTGCTCTTATTCGACAATCAACAT 59.705 40.000 0.00 0.00 0.00 2.71
2456 2666 6.349973 TGCTCTTATTCGACAATCAACATC 57.650 37.500 0.00 0.00 0.00 3.06
2457 2667 5.874261 TGCTCTTATTCGACAATCAACATCA 59.126 36.000 0.00 0.00 0.00 3.07
2458 2668 6.036408 TGCTCTTATTCGACAATCAACATCAG 59.964 38.462 0.00 0.00 0.00 2.90
2459 2669 6.349973 TCTTATTCGACAATCAACATCAGC 57.650 37.500 0.00 0.00 0.00 4.26
2460 2670 5.874261 TCTTATTCGACAATCAACATCAGCA 59.126 36.000 0.00 0.00 0.00 4.41
2461 2671 6.371271 TCTTATTCGACAATCAACATCAGCAA 59.629 34.615 0.00 0.00 0.00 3.91
2462 2672 4.827304 TTCGACAATCAACATCAGCAAA 57.173 36.364 0.00 0.00 0.00 3.68
2463 2673 4.827304 TCGACAATCAACATCAGCAAAA 57.173 36.364 0.00 0.00 0.00 2.44
2464 2674 4.786507 TCGACAATCAACATCAGCAAAAG 58.213 39.130 0.00 0.00 0.00 2.27
2465 2675 4.275689 TCGACAATCAACATCAGCAAAAGT 59.724 37.500 0.00 0.00 0.00 2.66
2466 2676 4.380678 CGACAATCAACATCAGCAAAAGTG 59.619 41.667 0.00 0.00 0.00 3.16
2467 2677 5.266733 ACAATCAACATCAGCAAAAGTGT 57.733 34.783 0.00 0.00 0.00 3.55
2468 2678 5.284079 ACAATCAACATCAGCAAAAGTGTC 58.716 37.500 0.00 0.00 0.00 3.67
2469 2679 3.988379 TCAACATCAGCAAAAGTGTCC 57.012 42.857 0.00 0.00 0.00 4.02
2470 2680 3.554934 TCAACATCAGCAAAAGTGTCCT 58.445 40.909 0.00 0.00 0.00 3.85
2471 2681 3.565482 TCAACATCAGCAAAAGTGTCCTC 59.435 43.478 0.00 0.00 0.00 3.71
2472 2682 3.498774 ACATCAGCAAAAGTGTCCTCT 57.501 42.857 0.00 0.00 0.00 3.69
2473 2683 3.406764 ACATCAGCAAAAGTGTCCTCTC 58.593 45.455 0.00 0.00 0.00 3.20
2474 2684 2.550830 TCAGCAAAAGTGTCCTCTCC 57.449 50.000 0.00 0.00 0.00 3.71
2475 2685 2.050144 TCAGCAAAAGTGTCCTCTCCT 58.950 47.619 0.00 0.00 0.00 3.69
2476 2686 2.037772 TCAGCAAAAGTGTCCTCTCCTC 59.962 50.000 0.00 0.00 0.00 3.71
2477 2687 2.050144 AGCAAAAGTGTCCTCTCCTCA 58.950 47.619 0.00 0.00 0.00 3.86
2478 2688 2.147150 GCAAAAGTGTCCTCTCCTCAC 58.853 52.381 0.00 0.00 0.00 3.51
2479 2689 2.224402 GCAAAAGTGTCCTCTCCTCACT 60.224 50.000 0.00 0.00 43.04 3.41
2480 2690 3.006967 GCAAAAGTGTCCTCTCCTCACTA 59.993 47.826 0.00 0.00 40.81 2.74
2481 2691 4.323104 GCAAAAGTGTCCTCTCCTCACTAT 60.323 45.833 0.00 0.00 40.81 2.12
2482 2692 5.415221 CAAAAGTGTCCTCTCCTCACTATC 58.585 45.833 0.00 0.00 40.81 2.08
2483 2693 4.601406 AAGTGTCCTCTCCTCACTATCT 57.399 45.455 0.00 0.00 40.81 1.98
2484 2694 3.897239 AGTGTCCTCTCCTCACTATCTG 58.103 50.000 0.00 0.00 40.06 2.90
2485 2695 3.268334 AGTGTCCTCTCCTCACTATCTGT 59.732 47.826 0.00 0.00 40.06 3.41
2486 2696 4.475381 AGTGTCCTCTCCTCACTATCTGTA 59.525 45.833 0.00 0.00 40.06 2.74
2487 2697 4.819630 GTGTCCTCTCCTCACTATCTGTAG 59.180 50.000 0.00 0.00 0.00 2.74
2488 2698 3.818773 GTCCTCTCCTCACTATCTGTAGC 59.181 52.174 0.00 0.00 0.00 3.58
2489 2699 3.153919 CCTCTCCTCACTATCTGTAGCC 58.846 54.545 0.00 0.00 0.00 3.93
2490 2700 3.435746 CCTCTCCTCACTATCTGTAGCCA 60.436 52.174 0.00 0.00 0.00 4.75
2491 2701 3.820467 CTCTCCTCACTATCTGTAGCCAG 59.180 52.174 0.00 0.00 40.25 4.85
2492 2702 3.203263 TCTCCTCACTATCTGTAGCCAGT 59.797 47.826 0.00 0.00 39.82 4.00
2493 2703 3.556999 TCCTCACTATCTGTAGCCAGTC 58.443 50.000 0.00 0.00 39.82 3.51
2494 2704 3.203263 TCCTCACTATCTGTAGCCAGTCT 59.797 47.826 0.00 0.00 39.82 3.24
2495 2705 3.568007 CCTCACTATCTGTAGCCAGTCTC 59.432 52.174 0.00 0.00 39.82 3.36
2496 2706 3.206964 TCACTATCTGTAGCCAGTCTCG 58.793 50.000 0.00 0.00 39.82 4.04
2497 2707 2.292016 CACTATCTGTAGCCAGTCTCGG 59.708 54.545 0.00 0.00 39.82 4.63
2505 2715 4.528674 CCAGTCTCGGCAAGGATG 57.471 61.111 0.00 0.00 0.00 3.51
2506 2716 1.153289 CCAGTCTCGGCAAGGATGG 60.153 63.158 0.00 0.00 0.00 3.51
2517 2727 3.543680 GCAAGGATGGCTTACTAGTGA 57.456 47.619 5.39 0.00 26.77 3.41
2518 2728 3.873910 GCAAGGATGGCTTACTAGTGAA 58.126 45.455 5.39 0.00 26.77 3.18
2519 2729 4.261801 GCAAGGATGGCTTACTAGTGAAA 58.738 43.478 5.39 0.00 26.77 2.69
2520 2730 4.095036 GCAAGGATGGCTTACTAGTGAAAC 59.905 45.833 5.39 0.00 26.77 2.78
2521 2731 5.245531 CAAGGATGGCTTACTAGTGAAACA 58.754 41.667 5.39 0.00 41.43 2.83
2522 2732 5.091261 AGGATGGCTTACTAGTGAAACAG 57.909 43.478 5.39 0.00 41.43 3.16
2523 2733 4.080863 AGGATGGCTTACTAGTGAAACAGG 60.081 45.833 5.39 0.00 41.43 4.00
2524 2734 4.081087 GGATGGCTTACTAGTGAAACAGGA 60.081 45.833 5.39 0.00 41.43 3.86
2525 2735 4.967084 TGGCTTACTAGTGAAACAGGAA 57.033 40.909 5.39 0.00 41.43 3.36
2526 2736 5.298989 TGGCTTACTAGTGAAACAGGAAA 57.701 39.130 5.39 0.00 41.43 3.13
2527 2737 5.876357 TGGCTTACTAGTGAAACAGGAAAT 58.124 37.500 5.39 0.00 41.43 2.17
2528 2738 6.303839 TGGCTTACTAGTGAAACAGGAAATT 58.696 36.000 5.39 0.00 41.43 1.82
2529 2739 7.455058 TGGCTTACTAGTGAAACAGGAAATTA 58.545 34.615 5.39 0.00 41.43 1.40
2530 2740 7.940137 TGGCTTACTAGTGAAACAGGAAATTAA 59.060 33.333 5.39 0.00 41.43 1.40
2531 2741 8.789762 GGCTTACTAGTGAAACAGGAAATTAAA 58.210 33.333 5.39 0.00 41.43 1.52
2532 2742 9.608617 GCTTACTAGTGAAACAGGAAATTAAAC 57.391 33.333 5.39 0.00 41.43 2.01
2536 2746 9.000486 ACTAGTGAAACAGGAAATTAAACTAGC 58.000 33.333 0.00 0.00 41.43 3.42
2537 2747 7.817418 AGTGAAACAGGAAATTAAACTAGCA 57.183 32.000 0.00 0.00 41.43 3.49
2538 2748 8.232913 AGTGAAACAGGAAATTAAACTAGCAA 57.767 30.769 0.00 0.00 41.43 3.91
2539 2749 8.352942 AGTGAAACAGGAAATTAAACTAGCAAG 58.647 33.333 0.00 0.00 41.43 4.01
2540 2750 8.349983 GTGAAACAGGAAATTAAACTAGCAAGA 58.650 33.333 0.00 0.00 36.32 3.02
2541 2751 8.908903 TGAAACAGGAAATTAAACTAGCAAGAA 58.091 29.630 0.00 0.00 0.00 2.52
2542 2752 9.744468 GAAACAGGAAATTAAACTAGCAAGAAA 57.256 29.630 0.00 0.00 0.00 2.52
2543 2753 9.750125 AAACAGGAAATTAAACTAGCAAGAAAG 57.250 29.630 0.00 0.00 0.00 2.62
2544 2754 7.886338 ACAGGAAATTAAACTAGCAAGAAAGG 58.114 34.615 0.00 0.00 0.00 3.11
2545 2755 7.039714 ACAGGAAATTAAACTAGCAAGAAAGGG 60.040 37.037 0.00 0.00 0.00 3.95
2546 2756 6.437477 AGGAAATTAAACTAGCAAGAAAGGGG 59.563 38.462 0.00 0.00 0.00 4.79
2547 2757 6.210784 GGAAATTAAACTAGCAAGAAAGGGGT 59.789 38.462 0.00 0.00 0.00 4.95
2548 2758 6.835819 AATTAAACTAGCAAGAAAGGGGTC 57.164 37.500 0.00 0.00 0.00 4.46
2549 2759 5.578157 TTAAACTAGCAAGAAAGGGGTCT 57.422 39.130 0.00 0.00 0.00 3.85
2550 2760 6.691255 TTAAACTAGCAAGAAAGGGGTCTA 57.309 37.500 0.00 0.00 0.00 2.59
2551 2761 5.780958 AAACTAGCAAGAAAGGGGTCTAT 57.219 39.130 0.00 0.00 0.00 1.98
2552 2762 4.762289 ACTAGCAAGAAAGGGGTCTATG 57.238 45.455 0.00 0.00 0.00 2.23
2553 2763 2.426842 AGCAAGAAAGGGGTCTATGC 57.573 50.000 0.00 0.00 34.56 3.14
2554 2764 1.635487 AGCAAGAAAGGGGTCTATGCA 59.365 47.619 0.00 0.00 35.70 3.96
2555 2765 2.243221 AGCAAGAAAGGGGTCTATGCAT 59.757 45.455 3.79 3.79 35.70 3.96
2556 2766 2.620585 GCAAGAAAGGGGTCTATGCATC 59.379 50.000 0.19 0.00 34.53 3.91
2557 2767 3.889815 CAAGAAAGGGGTCTATGCATCA 58.110 45.455 0.19 0.00 0.00 3.07
2558 2768 4.467769 CAAGAAAGGGGTCTATGCATCAT 58.532 43.478 0.19 0.00 0.00 2.45
2559 2769 4.363991 AGAAAGGGGTCTATGCATCATC 57.636 45.455 0.19 0.00 0.00 2.92
2560 2770 3.979347 AGAAAGGGGTCTATGCATCATCT 59.021 43.478 0.19 0.00 0.00 2.90
2561 2771 5.158141 AGAAAGGGGTCTATGCATCATCTA 58.842 41.667 0.19 0.00 0.00 1.98
2562 2772 5.789575 AGAAAGGGGTCTATGCATCATCTAT 59.210 40.000 0.19 0.00 0.00 1.98
2563 2773 6.962311 AGAAAGGGGTCTATGCATCATCTATA 59.038 38.462 0.19 0.00 0.00 1.31
2564 2774 6.552445 AAGGGGTCTATGCATCATCTATAC 57.448 41.667 0.19 0.00 0.00 1.47
2565 2775 4.646945 AGGGGTCTATGCATCATCTATACG 59.353 45.833 0.19 0.00 0.00 3.06
2566 2776 4.402793 GGGGTCTATGCATCATCTATACGT 59.597 45.833 0.19 0.00 0.00 3.57
2567 2777 5.344066 GGGTCTATGCATCATCTATACGTG 58.656 45.833 0.19 0.00 0.00 4.49
2568 2778 5.105716 GGGTCTATGCATCATCTATACGTGT 60.106 44.000 0.19 0.00 0.00 4.49
2569 2779 6.390721 GGTCTATGCATCATCTATACGTGTT 58.609 40.000 0.19 0.00 0.00 3.32
2570 2780 6.868864 GGTCTATGCATCATCTATACGTGTTT 59.131 38.462 0.19 0.00 0.00 2.83
2571 2781 7.385205 GGTCTATGCATCATCTATACGTGTTTT 59.615 37.037 0.19 0.00 0.00 2.43
2572 2782 8.217115 GTCTATGCATCATCTATACGTGTTTTG 58.783 37.037 0.19 0.00 0.00 2.44
2573 2783 5.155509 TGCATCATCTATACGTGTTTTGC 57.844 39.130 0.00 0.00 0.00 3.68
2574 2784 4.875536 TGCATCATCTATACGTGTTTTGCT 59.124 37.500 0.00 0.00 0.00 3.91
2575 2785 5.006649 TGCATCATCTATACGTGTTTTGCTC 59.993 40.000 0.00 0.00 0.00 4.26
2576 2786 5.006649 GCATCATCTATACGTGTTTTGCTCA 59.993 40.000 0.00 0.00 0.00 4.26
2577 2787 6.293081 GCATCATCTATACGTGTTTTGCTCAT 60.293 38.462 0.00 0.00 0.00 2.90
2578 2788 7.095649 GCATCATCTATACGTGTTTTGCTCATA 60.096 37.037 0.00 0.00 0.00 2.15
2579 2789 7.694388 TCATCTATACGTGTTTTGCTCATAC 57.306 36.000 0.00 0.00 0.00 2.39
2580 2790 6.700081 TCATCTATACGTGTTTTGCTCATACC 59.300 38.462 0.00 0.00 0.00 2.73
2581 2791 5.038683 TCTATACGTGTTTTGCTCATACCG 58.961 41.667 0.00 0.00 0.00 4.02
2582 2792 1.153353 ACGTGTTTTGCTCATACCGG 58.847 50.000 0.00 0.00 0.00 5.28
2583 2793 1.153353 CGTGTTTTGCTCATACCGGT 58.847 50.000 13.98 13.98 0.00 5.28
2584 2794 1.136085 CGTGTTTTGCTCATACCGGTG 60.136 52.381 19.93 0.25 0.00 4.94
2585 2795 0.878416 TGTTTTGCTCATACCGGTGC 59.122 50.000 19.93 13.05 0.00 5.01
2586 2796 0.878416 GTTTTGCTCATACCGGTGCA 59.122 50.000 19.93 15.96 35.68 4.57
2587 2797 1.472480 GTTTTGCTCATACCGGTGCAT 59.528 47.619 19.93 0.00 37.16 3.96
2588 2798 2.680841 GTTTTGCTCATACCGGTGCATA 59.319 45.455 19.93 10.58 37.16 3.14
2589 2799 2.928801 TTGCTCATACCGGTGCATAT 57.071 45.000 19.93 0.00 37.16 1.78
2590 2800 4.344359 TTTGCTCATACCGGTGCATATA 57.656 40.909 19.93 0.00 37.16 0.86
2591 2801 4.344359 TTGCTCATACCGGTGCATATAA 57.656 40.909 19.93 0.00 37.16 0.98
2592 2802 4.344359 TGCTCATACCGGTGCATATAAA 57.656 40.909 19.93 0.00 32.86 1.40
2593 2803 4.709250 TGCTCATACCGGTGCATATAAAA 58.291 39.130 19.93 0.00 32.86 1.52
2615 2825 4.628074 AGAGCAACAATACTACGTGTGTT 58.372 39.130 0.00 0.00 34.60 3.32
2629 2839 3.949113 ACGTGTGTTTAAACTCCATGGTT 59.051 39.130 23.01 0.96 0.00 3.67
2645 2855 5.134169 TCCATGGTTCCATTCCATCTAATCA 59.866 40.000 12.58 0.00 42.92 2.57
2653 2863 4.285292 CATTCCATCTAATCAAGCAACGC 58.715 43.478 0.00 0.00 0.00 4.84
2681 2891 4.738740 GCTGCATATAAAAGAGCAAAGCAG 59.261 41.667 0.00 0.00 46.95 4.24
2761 2971 4.130857 TCAGATGAGATCAGACTACGGTC 58.869 47.826 0.00 0.00 42.41 4.79
2769 2979 2.875485 GACTACGGTCTGCTCGCA 59.125 61.111 0.00 0.00 39.24 5.10
2770 2980 1.226435 GACTACGGTCTGCTCGCAG 60.226 63.158 12.54 12.54 44.86 5.18
2771 2981 1.924320 GACTACGGTCTGCTCGCAGT 61.924 60.000 17.53 3.10 43.96 4.40
2772 2982 1.515088 CTACGGTCTGCTCGCAGTG 60.515 63.158 17.53 11.55 43.96 3.66
2773 2983 2.874010 CTACGGTCTGCTCGCAGTGG 62.874 65.000 17.53 10.77 43.96 4.00
2774 2984 4.056125 CGGTCTGCTCGCAGTGGA 62.056 66.667 17.53 0.00 43.96 4.02
2775 2985 2.433318 GGTCTGCTCGCAGTGGAC 60.433 66.667 17.53 9.49 43.96 4.02
2776 2986 2.433318 GTCTGCTCGCAGTGGACC 60.433 66.667 17.53 0.00 43.96 4.46
2777 2987 2.601666 TCTGCTCGCAGTGGACCT 60.602 61.111 17.53 0.00 43.96 3.85
2778 2988 2.433838 CTGCTCGCAGTGGACCTG 60.434 66.667 10.65 0.00 44.53 4.00
2779 2989 3.947132 CTGCTCGCAGTGGACCTGG 62.947 68.421 10.65 0.00 41.81 4.45
2781 2991 4.767255 CTCGCAGTGGACCTGGCC 62.767 72.222 0.00 0.00 41.81 5.36
2804 3014 4.479993 CCTCCCTCGCCTGGCTTG 62.480 72.222 17.92 8.88 0.00 4.01
2805 3015 3.393970 CTCCCTCGCCTGGCTTGA 61.394 66.667 17.92 6.61 0.00 3.02
2806 3016 2.927856 TCCCTCGCCTGGCTTGAA 60.928 61.111 17.92 0.00 0.00 2.69
2807 3017 2.262774 CTCCCTCGCCTGGCTTGAAT 62.263 60.000 17.92 0.00 0.00 2.57
2808 3018 1.821332 CCCTCGCCTGGCTTGAATC 60.821 63.158 17.92 0.00 0.00 2.52
2809 3019 1.821332 CCTCGCCTGGCTTGAATCC 60.821 63.158 17.92 0.00 0.00 3.01
2810 3020 2.125147 TCGCCTGGCTTGAATCCG 60.125 61.111 17.92 0.00 0.00 4.18
2811 3021 3.204827 CGCCTGGCTTGAATCCGG 61.205 66.667 17.92 0.00 0.00 5.14
2812 3022 3.521796 GCCTGGCTTGAATCCGGC 61.522 66.667 12.43 5.47 36.61 6.13
2813 3023 2.273449 CCTGGCTTGAATCCGGCT 59.727 61.111 0.00 0.00 0.00 5.52
2814 3024 1.526887 CCTGGCTTGAATCCGGCTA 59.473 57.895 0.00 0.00 0.00 3.93
2815 3025 0.815615 CCTGGCTTGAATCCGGCTAC 60.816 60.000 0.00 0.00 0.00 3.58
2816 3026 1.153449 TGGCTTGAATCCGGCTACG 60.153 57.895 0.00 0.00 40.55 3.51
2817 3027 1.143183 GGCTTGAATCCGGCTACGA 59.857 57.895 0.00 0.00 44.60 3.43
2818 3028 1.152383 GGCTTGAATCCGGCTACGAC 61.152 60.000 0.00 0.00 44.60 4.34
2819 3029 1.152383 GCTTGAATCCGGCTACGACC 61.152 60.000 0.00 0.00 44.60 4.79
2820 3030 0.174845 CTTGAATCCGGCTACGACCA 59.825 55.000 0.00 0.00 44.60 4.02
2821 3031 0.828022 TTGAATCCGGCTACGACCAT 59.172 50.000 0.00 0.00 44.60 3.55
2822 3032 0.104120 TGAATCCGGCTACGACCATG 59.896 55.000 0.00 0.00 44.60 3.66
2823 3033 0.600255 GAATCCGGCTACGACCATGG 60.600 60.000 11.19 11.19 44.60 3.66
2824 3034 2.040009 AATCCGGCTACGACCATGGG 62.040 60.000 18.09 0.85 44.60 4.00
2825 3035 3.467226 CCGGCTACGACCATGGGT 61.467 66.667 18.09 7.84 44.60 4.51
2838 3048 3.660571 TGGGTCCACCATGGCTGG 61.661 66.667 21.11 21.11 46.80 4.85
2862 3072 3.807538 GTGCAGCTCGCCATGGTG 61.808 66.667 19.75 19.75 41.33 4.17
2865 3075 2.360350 CAGCTCGCCATGGTGGTT 60.360 61.111 24.82 10.93 40.46 3.67
2866 3076 1.973281 CAGCTCGCCATGGTGGTTT 60.973 57.895 24.82 7.89 40.46 3.27
2867 3077 1.973281 AGCTCGCCATGGTGGTTTG 60.973 57.895 24.82 13.39 40.46 2.93
2868 3078 1.971167 GCTCGCCATGGTGGTTTGA 60.971 57.895 24.82 4.43 40.46 2.69
2869 3079 1.926511 GCTCGCCATGGTGGTTTGAG 61.927 60.000 24.82 15.08 40.46 3.02
2870 3080 1.303236 TCGCCATGGTGGTTTGAGG 60.303 57.895 24.82 0.00 40.46 3.86
2871 3081 1.603455 CGCCATGGTGGTTTGAGGT 60.603 57.895 18.06 0.00 40.46 3.85
2872 3082 1.178534 CGCCATGGTGGTTTGAGGTT 61.179 55.000 18.06 0.00 40.46 3.50
2873 3083 0.318120 GCCATGGTGGTTTGAGGTTG 59.682 55.000 14.67 0.00 40.46 3.77
2874 3084 0.968405 CCATGGTGGTTTGAGGTTGG 59.032 55.000 2.57 0.00 31.35 3.77
2875 3085 0.968405 CATGGTGGTTTGAGGTTGGG 59.032 55.000 0.00 0.00 0.00 4.12
2876 3086 0.178935 ATGGTGGTTTGAGGTTGGGG 60.179 55.000 0.00 0.00 0.00 4.96
2877 3087 1.533033 GGTGGTTTGAGGTTGGGGG 60.533 63.158 0.00 0.00 0.00 5.40
2878 3088 1.539665 GTGGTTTGAGGTTGGGGGA 59.460 57.895 0.00 0.00 0.00 4.81
2879 3089 0.105913 GTGGTTTGAGGTTGGGGGAA 60.106 55.000 0.00 0.00 0.00 3.97
2880 3090 0.637195 TGGTTTGAGGTTGGGGGAAA 59.363 50.000 0.00 0.00 0.00 3.13
2881 3091 1.338107 GGTTTGAGGTTGGGGGAAAG 58.662 55.000 0.00 0.00 0.00 2.62
2882 3092 1.338107 GTTTGAGGTTGGGGGAAAGG 58.662 55.000 0.00 0.00 0.00 3.11
2883 3093 1.133294 GTTTGAGGTTGGGGGAAAGGA 60.133 52.381 0.00 0.00 0.00 3.36
2884 3094 1.466858 TTGAGGTTGGGGGAAAGGAT 58.533 50.000 0.00 0.00 0.00 3.24
2885 3095 1.466858 TGAGGTTGGGGGAAAGGATT 58.533 50.000 0.00 0.00 0.00 3.01
2886 3096 1.357761 TGAGGTTGGGGGAAAGGATTC 59.642 52.381 0.00 0.00 34.66 2.52
2887 3097 1.357761 GAGGTTGGGGGAAAGGATTCA 59.642 52.381 0.00 0.00 37.29 2.57
2888 3098 2.010699 AGGTTGGGGGAAAGGATTCAT 58.989 47.619 0.00 0.00 37.29 2.57
2889 3099 2.386811 AGGTTGGGGGAAAGGATTCATT 59.613 45.455 0.00 0.00 37.29 2.57
2890 3100 2.501316 GGTTGGGGGAAAGGATTCATTG 59.499 50.000 0.00 0.00 37.29 2.82
2891 3101 1.864669 TGGGGGAAAGGATTCATTGC 58.135 50.000 0.00 0.00 37.29 3.56
2892 3102 1.362237 TGGGGGAAAGGATTCATTGCT 59.638 47.619 0.00 0.00 37.29 3.91
2893 3103 1.758862 GGGGGAAAGGATTCATTGCTG 59.241 52.381 0.00 0.00 37.29 4.41
2894 3104 1.758862 GGGGAAAGGATTCATTGCTGG 59.241 52.381 0.00 0.00 37.29 4.85
2895 3105 2.460669 GGGAAAGGATTCATTGCTGGT 58.539 47.619 0.00 0.00 37.29 4.00
2896 3106 3.627237 GGGGAAAGGATTCATTGCTGGTA 60.627 47.826 0.00 0.00 37.29 3.25
2897 3107 3.633986 GGGAAAGGATTCATTGCTGGTAG 59.366 47.826 0.00 0.00 37.29 3.18
2898 3108 4.526970 GGAAAGGATTCATTGCTGGTAGA 58.473 43.478 0.00 0.00 37.29 2.59
2899 3109 4.336713 GGAAAGGATTCATTGCTGGTAGAC 59.663 45.833 0.00 0.00 37.29 2.59
2900 3110 4.574674 AAGGATTCATTGCTGGTAGACA 57.425 40.909 0.00 0.00 0.00 3.41
2901 3111 3.878778 AGGATTCATTGCTGGTAGACAC 58.121 45.455 0.00 0.00 0.00 3.67
2902 3112 3.521126 AGGATTCATTGCTGGTAGACACT 59.479 43.478 0.00 0.00 0.00 3.55
2903 3113 3.624861 GGATTCATTGCTGGTAGACACTG 59.375 47.826 0.00 0.00 0.00 3.66
2904 3114 4.507710 GATTCATTGCTGGTAGACACTGA 58.492 43.478 0.00 0.00 0.00 3.41
2905 3115 3.319137 TCATTGCTGGTAGACACTGAC 57.681 47.619 0.00 0.00 0.00 3.51
2906 3116 2.028112 TCATTGCTGGTAGACACTGACC 60.028 50.000 0.00 0.00 36.17 4.02
2907 3117 1.419381 TTGCTGGTAGACACTGACCA 58.581 50.000 0.00 0.00 43.55 4.02
2908 3118 0.679505 TGCTGGTAGACACTGACCAC 59.320 55.000 0.00 0.00 40.87 4.16
2909 3119 0.969894 GCTGGTAGACACTGACCACT 59.030 55.000 0.00 0.00 40.87 4.00
2910 3120 1.337260 GCTGGTAGACACTGACCACTG 60.337 57.143 0.00 0.00 40.87 3.66
2911 3121 1.273606 CTGGTAGACACTGACCACTGG 59.726 57.143 0.00 0.00 40.87 4.00
2912 3122 0.608640 GGTAGACACTGACCACTGGG 59.391 60.000 0.00 0.00 41.29 4.45
2913 3123 0.037232 GTAGACACTGACCACTGGGC 60.037 60.000 0.00 0.00 37.90 5.36
2914 3124 1.192146 TAGACACTGACCACTGGGCC 61.192 60.000 0.00 0.00 37.90 5.80
2915 3125 3.553095 GACACTGACCACTGGGCCC 62.553 68.421 17.59 17.59 37.90 5.80
2916 3126 4.704833 CACTGACCACTGGGCCCG 62.705 72.222 19.37 14.85 37.90 6.13
2944 3154 2.620562 GGAAACGGTTTGGCTACGT 58.379 52.632 11.43 0.00 43.43 3.57
2945 3155 0.236449 GGAAACGGTTTGGCTACGTG 59.764 55.000 11.43 0.00 41.12 4.49
2946 3156 1.219646 GAAACGGTTTGGCTACGTGA 58.780 50.000 11.43 0.00 41.12 4.35
2947 3157 1.598601 GAAACGGTTTGGCTACGTGAA 59.401 47.619 11.43 0.00 41.12 3.18
2948 3158 1.886886 AACGGTTTGGCTACGTGAAT 58.113 45.000 0.00 0.00 41.12 2.57
2949 3159 1.153353 ACGGTTTGGCTACGTGAATG 58.847 50.000 0.00 0.00 39.64 2.67
2950 3160 0.446222 CGGTTTGGCTACGTGAATGG 59.554 55.000 0.00 0.00 0.00 3.16
2951 3161 0.170339 GGTTTGGCTACGTGAATGGC 59.830 55.000 0.00 0.00 0.00 4.40
2952 3162 0.878416 GTTTGGCTACGTGAATGGCA 59.122 50.000 0.00 1.34 34.48 4.92
2953 3163 1.135689 GTTTGGCTACGTGAATGGCAG 60.136 52.381 0.00 0.00 37.55 4.85
2954 3164 0.323302 TTGGCTACGTGAATGGCAGA 59.677 50.000 0.00 0.00 37.55 4.26
2955 3165 0.323302 TGGCTACGTGAATGGCAGAA 59.677 50.000 0.00 0.00 0.00 3.02
2956 3166 0.727398 GGCTACGTGAATGGCAGAAC 59.273 55.000 0.00 0.00 0.00 3.01
2957 3167 1.438651 GCTACGTGAATGGCAGAACA 58.561 50.000 0.00 0.00 0.00 3.18
2958 3168 1.804151 GCTACGTGAATGGCAGAACAA 59.196 47.619 0.00 0.00 0.00 2.83
2959 3169 2.159653 GCTACGTGAATGGCAGAACAAG 60.160 50.000 0.00 0.00 0.00 3.16
2960 3170 1.967319 ACGTGAATGGCAGAACAAGT 58.033 45.000 0.00 0.00 0.00 3.16
2961 3171 2.297701 ACGTGAATGGCAGAACAAGTT 58.702 42.857 0.00 0.00 0.00 2.66
2962 3172 2.033299 ACGTGAATGGCAGAACAAGTTG 59.967 45.455 0.00 0.00 0.00 3.16
2963 3173 2.605338 CGTGAATGGCAGAACAAGTTGG 60.605 50.000 7.96 0.00 0.00 3.77
2964 3174 1.962807 TGAATGGCAGAACAAGTTGGG 59.037 47.619 7.96 0.00 0.00 4.12
2965 3175 0.681175 AATGGCAGAACAAGTTGGGC 59.319 50.000 7.96 5.29 0.00 5.36
2966 3176 1.187567 ATGGCAGAACAAGTTGGGCC 61.188 55.000 17.85 17.85 38.28 5.80
2967 3177 2.644992 GCAGAACAAGTTGGGCCG 59.355 61.111 7.96 0.00 0.00 6.13
2968 3178 1.896660 GCAGAACAAGTTGGGCCGA 60.897 57.895 7.96 0.00 0.00 5.54
2969 3179 1.452145 GCAGAACAAGTTGGGCCGAA 61.452 55.000 7.96 0.00 0.00 4.30
2970 3180 1.028905 CAGAACAAGTTGGGCCGAAA 58.971 50.000 0.01 0.00 0.00 3.46
2971 3181 1.613437 CAGAACAAGTTGGGCCGAAAT 59.387 47.619 0.01 0.00 0.00 2.17
2972 3182 1.613437 AGAACAAGTTGGGCCGAAATG 59.387 47.619 0.01 7.36 0.00 2.32
2973 3183 1.339929 GAACAAGTTGGGCCGAAATGT 59.660 47.619 12.59 12.59 0.00 2.71
2974 3184 0.958822 ACAAGTTGGGCCGAAATGTC 59.041 50.000 12.59 0.00 0.00 3.06
2975 3185 1.247567 CAAGTTGGGCCGAAATGTCT 58.752 50.000 0.01 0.00 0.00 3.41
2976 3186 1.068333 CAAGTTGGGCCGAAATGTCTG 60.068 52.381 0.01 0.00 0.00 3.51
2977 3187 0.110486 AGTTGGGCCGAAATGTCTGT 59.890 50.000 0.01 0.00 0.00 3.41
2978 3188 0.521735 GTTGGGCCGAAATGTCTGTC 59.478 55.000 0.01 0.00 0.00 3.51
2979 3189 0.109532 TTGGGCCGAAATGTCTGTCA 59.890 50.000 0.00 0.00 0.00 3.58
2980 3190 0.321564 TGGGCCGAAATGTCTGTCAG 60.322 55.000 0.00 0.00 0.00 3.51
2981 3191 1.648467 GGGCCGAAATGTCTGTCAGC 61.648 60.000 0.00 0.00 0.00 4.26
2982 3192 1.648467 GGCCGAAATGTCTGTCAGCC 61.648 60.000 0.00 0.00 0.00 4.85
2983 3193 1.970917 GCCGAAATGTCTGTCAGCCG 61.971 60.000 0.00 0.00 0.00 5.52
2984 3194 0.389817 CCGAAATGTCTGTCAGCCGA 60.390 55.000 0.00 0.00 0.00 5.54
2985 3195 0.994995 CGAAATGTCTGTCAGCCGAG 59.005 55.000 0.00 0.00 0.00 4.63
2986 3196 1.402852 CGAAATGTCTGTCAGCCGAGA 60.403 52.381 0.00 0.00 0.00 4.04
2987 3197 2.688507 GAAATGTCTGTCAGCCGAGAA 58.311 47.619 0.00 0.00 0.00 2.87
2988 3198 2.839486 AATGTCTGTCAGCCGAGAAA 57.161 45.000 0.00 0.00 0.00 2.52
2989 3199 2.086054 ATGTCTGTCAGCCGAGAAAC 57.914 50.000 0.00 0.00 0.00 2.78
2990 3200 0.750249 TGTCTGTCAGCCGAGAAACA 59.250 50.000 0.00 0.00 0.00 2.83
2991 3201 1.138069 TGTCTGTCAGCCGAGAAACAA 59.862 47.619 0.00 0.00 0.00 2.83
2992 3202 2.210116 GTCTGTCAGCCGAGAAACAAA 58.790 47.619 0.00 0.00 0.00 2.83
2993 3203 2.612212 GTCTGTCAGCCGAGAAACAAAA 59.388 45.455 0.00 0.00 0.00 2.44
2994 3204 3.251004 GTCTGTCAGCCGAGAAACAAAAT 59.749 43.478 0.00 0.00 0.00 1.82
2995 3205 3.250762 TCTGTCAGCCGAGAAACAAAATG 59.749 43.478 0.00 0.00 0.00 2.32
2996 3206 2.293122 TGTCAGCCGAGAAACAAAATGG 59.707 45.455 0.00 0.00 0.00 3.16
2997 3207 2.552315 GTCAGCCGAGAAACAAAATGGA 59.448 45.455 0.00 0.00 0.00 3.41
2998 3208 2.552315 TCAGCCGAGAAACAAAATGGAC 59.448 45.455 0.00 0.00 0.00 4.02
2999 3209 2.554032 CAGCCGAGAAACAAAATGGACT 59.446 45.455 0.00 0.00 0.00 3.85
3000 3210 2.814336 AGCCGAGAAACAAAATGGACTC 59.186 45.455 0.00 0.00 0.00 3.36
3001 3211 2.814336 GCCGAGAAACAAAATGGACTCT 59.186 45.455 0.00 0.00 0.00 3.24
3002 3212 4.000988 GCCGAGAAACAAAATGGACTCTA 58.999 43.478 0.00 0.00 0.00 2.43
3003 3213 4.093556 GCCGAGAAACAAAATGGACTCTAG 59.906 45.833 0.00 0.00 0.00 2.43
3004 3214 4.093556 CCGAGAAACAAAATGGACTCTAGC 59.906 45.833 0.00 0.00 0.00 3.42
3005 3215 4.932200 CGAGAAACAAAATGGACTCTAGCT 59.068 41.667 0.00 0.00 0.00 3.32
3006 3216 5.409826 CGAGAAACAAAATGGACTCTAGCTT 59.590 40.000 0.00 0.00 0.00 3.74
3007 3217 6.590292 CGAGAAACAAAATGGACTCTAGCTTA 59.410 38.462 0.00 0.00 0.00 3.09
3008 3218 7.201478 CGAGAAACAAAATGGACTCTAGCTTAG 60.201 40.741 0.00 0.00 0.00 2.18
3009 3219 6.881602 AGAAACAAAATGGACTCTAGCTTAGG 59.118 38.462 0.00 0.00 0.00 2.69
3010 3220 4.518249 ACAAAATGGACTCTAGCTTAGGC 58.482 43.478 0.00 0.00 39.06 3.93
3027 3237 7.208225 GCTTAGGCTTAATAATCCTTTCCTG 57.792 40.000 0.33 0.00 35.22 3.86
3028 3238 6.207614 GCTTAGGCTTAATAATCCTTTCCTGG 59.792 42.308 0.33 0.00 35.22 4.45
3029 3239 5.066913 AGGCTTAATAATCCTTTCCTGGG 57.933 43.478 0.00 0.00 0.00 4.45
3030 3240 3.574396 GGCTTAATAATCCTTTCCTGGGC 59.426 47.826 0.00 0.00 0.00 5.36
3031 3241 3.574396 GCTTAATAATCCTTTCCTGGGCC 59.426 47.826 0.00 0.00 0.00 5.80
3032 3242 2.364972 AATAATCCTTTCCTGGGCCG 57.635 50.000 0.00 0.00 0.00 6.13
3033 3243 0.478507 ATAATCCTTTCCTGGGCCGG 59.521 55.000 5.01 5.01 0.00 6.13
3034 3244 1.641552 TAATCCTTTCCTGGGCCGGG 61.642 60.000 26.50 26.50 0.00 5.73
3035 3245 3.962530 ATCCTTTCCTGGGCCGGGA 62.963 63.158 30.71 30.71 37.09 5.14
3036 3246 3.420482 CCTTTCCTGGGCCGGGAT 61.420 66.667 34.22 0.00 38.86 3.85
3037 3247 2.124151 CTTTCCTGGGCCGGGATG 60.124 66.667 34.22 24.55 38.86 3.51
3038 3248 2.938798 TTTCCTGGGCCGGGATGT 60.939 61.111 34.22 0.00 38.86 3.06
3039 3249 2.499303 CTTTCCTGGGCCGGGATGTT 62.499 60.000 34.22 0.00 38.86 2.71
3040 3250 2.087857 TTTCCTGGGCCGGGATGTTT 62.088 55.000 34.22 0.00 38.86 2.83
3041 3251 2.037208 CCTGGGCCGGGATGTTTT 59.963 61.111 28.43 0.00 29.82 2.43
3042 3252 2.350458 CCTGGGCCGGGATGTTTTG 61.350 63.158 28.43 0.00 29.82 2.44
3043 3253 2.283532 TGGGCCGGGATGTTTTGG 60.284 61.111 2.18 0.00 0.00 3.28
3044 3254 3.074369 GGGCCGGGATGTTTTGGG 61.074 66.667 2.18 0.00 0.00 4.12
3045 3255 3.770040 GGCCGGGATGTTTTGGGC 61.770 66.667 2.18 0.00 43.01 5.36
3046 3256 2.679996 GCCGGGATGTTTTGGGCT 60.680 61.111 2.18 0.00 40.59 5.19
3047 3257 3.005540 GCCGGGATGTTTTGGGCTG 62.006 63.158 2.18 0.00 40.59 4.85
3048 3258 2.350458 CCGGGATGTTTTGGGCTGG 61.350 63.158 0.00 0.00 0.00 4.85
3049 3259 2.350458 CGGGATGTTTTGGGCTGGG 61.350 63.158 0.00 0.00 0.00 4.45
3050 3260 2.659063 GGGATGTTTTGGGCTGGGC 61.659 63.158 0.00 0.00 0.00 5.36
3051 3261 1.912763 GGATGTTTTGGGCTGGGCA 60.913 57.895 0.00 0.00 0.00 5.36
3052 3262 1.293179 GATGTTTTGGGCTGGGCAC 59.707 57.895 0.00 0.00 0.00 5.01
3053 3263 1.152269 ATGTTTTGGGCTGGGCACT 60.152 52.632 0.00 0.00 30.56 4.40
3054 3264 0.114168 ATGTTTTGGGCTGGGCACTA 59.886 50.000 0.00 0.00 30.56 2.74
3055 3265 0.539438 TGTTTTGGGCTGGGCACTAG 60.539 55.000 0.00 0.00 41.08 2.57
3056 3266 0.251165 GTTTTGGGCTGGGCACTAGA 60.251 55.000 0.00 0.00 40.33 2.43
3057 3267 0.480690 TTTTGGGCTGGGCACTAGAA 59.519 50.000 0.00 0.00 40.33 2.10
3058 3268 0.480690 TTTGGGCTGGGCACTAGAAA 59.519 50.000 0.00 0.00 40.33 2.52
3059 3269 0.251165 TTGGGCTGGGCACTAGAAAC 60.251 55.000 0.00 0.00 40.33 2.78
3060 3270 1.378646 GGGCTGGGCACTAGAAACC 60.379 63.158 0.00 0.00 40.33 3.27
3061 3271 1.685820 GGCTGGGCACTAGAAACCT 59.314 57.895 0.00 0.00 40.33 3.50
3062 3272 0.678048 GGCTGGGCACTAGAAACCTG 60.678 60.000 0.00 0.51 40.33 4.00
3063 3273 0.678048 GCTGGGCACTAGAAACCTGG 60.678 60.000 0.00 0.00 40.33 4.45
3064 3274 0.984230 CTGGGCACTAGAAACCTGGA 59.016 55.000 0.00 0.00 40.33 3.86
3065 3275 1.351017 CTGGGCACTAGAAACCTGGAA 59.649 52.381 0.00 0.00 40.33 3.53
3066 3276 1.777878 TGGGCACTAGAAACCTGGAAA 59.222 47.619 0.00 0.00 0.00 3.13
3067 3277 2.175931 TGGGCACTAGAAACCTGGAAAA 59.824 45.455 0.00 0.00 0.00 2.29
3068 3278 3.227614 GGGCACTAGAAACCTGGAAAAA 58.772 45.455 0.00 0.00 0.00 1.94
3087 3297 5.887214 AAAAATATATCCAAACCCCAGCC 57.113 39.130 0.00 0.00 0.00 4.85
3088 3298 3.542969 AATATATCCAAACCCCAGCCC 57.457 47.619 0.00 0.00 0.00 5.19
3089 3299 0.768622 TATATCCAAACCCCAGCCCG 59.231 55.000 0.00 0.00 0.00 6.13
3090 3300 2.006805 ATATCCAAACCCCAGCCCGG 62.007 60.000 0.00 0.00 0.00 5.73
3098 3308 4.447342 CCCAGCCCGGCCTGAAAT 62.447 66.667 15.35 0.00 34.77 2.17
3099 3309 2.595095 CCAGCCCGGCCTGAAATA 59.405 61.111 15.35 0.00 34.77 1.40
3100 3310 1.151450 CCAGCCCGGCCTGAAATAT 59.849 57.895 15.35 0.00 34.77 1.28
3101 3311 0.400213 CCAGCCCGGCCTGAAATATA 59.600 55.000 15.35 0.00 34.77 0.86
3102 3312 1.004745 CCAGCCCGGCCTGAAATATAT 59.995 52.381 15.35 0.00 34.77 0.86
3103 3313 2.086869 CAGCCCGGCCTGAAATATATG 58.913 52.381 6.58 0.00 34.77 1.78
3104 3314 0.811281 GCCCGGCCTGAAATATATGC 59.189 55.000 0.00 0.00 0.00 3.14
3105 3315 1.886222 GCCCGGCCTGAAATATATGCA 60.886 52.381 0.00 0.00 0.00 3.96
3106 3316 2.513753 CCCGGCCTGAAATATATGCAA 58.486 47.619 0.00 0.00 0.00 4.08
3107 3317 2.890311 CCCGGCCTGAAATATATGCAAA 59.110 45.455 0.00 0.00 0.00 3.68
3108 3318 3.320541 CCCGGCCTGAAATATATGCAAAA 59.679 43.478 0.00 0.00 0.00 2.44
3109 3319 4.202202 CCCGGCCTGAAATATATGCAAAAA 60.202 41.667 0.00 0.00 0.00 1.94
3125 3335 3.772096 AAAAATGGGGAGCAGAGCA 57.228 47.368 0.00 0.00 0.00 4.26
3126 3336 2.014010 AAAAATGGGGAGCAGAGCAA 57.986 45.000 0.00 0.00 0.00 3.91
3127 3337 1.260544 AAAATGGGGAGCAGAGCAAC 58.739 50.000 0.00 0.00 0.00 4.17
3128 3338 0.407139 AAATGGGGAGCAGAGCAACT 59.593 50.000 0.00 0.00 0.00 3.16
3129 3339 1.289160 AATGGGGAGCAGAGCAACTA 58.711 50.000 0.00 0.00 0.00 2.24
3130 3340 0.543749 ATGGGGAGCAGAGCAACTAC 59.456 55.000 0.00 0.00 0.00 2.73
3131 3341 0.545309 TGGGGAGCAGAGCAACTACT 60.545 55.000 0.00 0.00 0.00 2.57
3132 3342 0.615850 GGGGAGCAGAGCAACTACTT 59.384 55.000 0.00 0.00 0.00 2.24
3133 3343 1.003696 GGGGAGCAGAGCAACTACTTT 59.996 52.381 0.00 0.00 0.00 2.66
3134 3344 2.553247 GGGGAGCAGAGCAACTACTTTT 60.553 50.000 0.00 0.00 0.00 2.27
3135 3345 3.149981 GGGAGCAGAGCAACTACTTTTT 58.850 45.455 0.00 0.00 0.00 1.94
3160 3370 9.912634 TTTTTGCGAGAGAAATTTTCAATCTAT 57.087 25.926 11.53 0.00 0.00 1.98
3161 3371 9.912634 TTTTGCGAGAGAAATTTTCAATCTATT 57.087 25.926 11.53 0.00 0.00 1.73
3162 3372 9.559958 TTTGCGAGAGAAATTTTCAATCTATTC 57.440 29.630 11.53 0.00 0.00 1.75
3163 3373 8.267620 TGCGAGAGAAATTTTCAATCTATTCA 57.732 30.769 11.53 3.45 0.00 2.57
3164 3374 8.896744 TGCGAGAGAAATTTTCAATCTATTCAT 58.103 29.630 11.53 0.00 0.00 2.57
3165 3375 9.379811 GCGAGAGAAATTTTCAATCTATTCATC 57.620 33.333 11.53 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.767665 TCTCTGCAATGGTAAAGCTTTTGTA 59.232 36.000 18.47 7.68 0.00 2.41
38 39 2.751806 GCTCTCTGCAATGGTAAAGCTT 59.248 45.455 0.00 0.00 42.31 3.74
86 87 3.067180 CCATATGTGTTCTTCATGGCCAC 59.933 47.826 8.16 0.00 30.49 5.01
126 127 9.434275 TGGAAGATATATCTACCAGTTCTTCAA 57.566 33.333 15.64 0.00 39.39 2.69
162 163 7.012044 GCAAACTTGAAGTTACTTCCTGAGTAA 59.988 37.037 20.69 7.68 46.07 2.24
312 316 4.630111 TGTTTTTGGCATTTGGAGATGAC 58.370 39.130 0.00 0.00 35.53 3.06
314 318 3.998341 CCTGTTTTTGGCATTTGGAGATG 59.002 43.478 0.00 0.00 0.00 2.90
324 328 2.428890 CCACACTAACCTGTTTTTGGCA 59.571 45.455 0.00 0.00 0.00 4.92
518 526 2.695666 AGACGGCTGCTAACATGTATCT 59.304 45.455 0.00 0.00 0.00 1.98
779 790 3.118334 CCTTCTCCTCTGATTGTGCATCT 60.118 47.826 0.00 0.00 32.34 2.90
821 832 0.822811 TGCTGACTCTCATCAGGAGC 59.177 55.000 5.02 0.00 45.35 4.70
977 1163 3.445857 GATGCTAACCTCGTTAGTGTCC 58.554 50.000 11.96 0.00 44.95 4.02
1027 1213 3.441572 AGAACGCTTGAAAGGAATGGATG 59.558 43.478 0.00 0.00 0.00 3.51
1059 1245 2.429610 GGCCATGTCATGCTTCTCAATT 59.570 45.455 7.35 0.00 0.00 2.32
1120 1307 1.685517 TGCCATGTTAGCAACAGCAAA 59.314 42.857 11.00 0.00 45.95 3.68
1405 1594 4.583871 GTCAAGAGGTTGTCTCCATTCAT 58.416 43.478 0.00 0.00 43.44 2.57
1430 1619 3.001514 CCCCTCCATGGTCCAGTG 58.998 66.667 12.58 0.00 0.00 3.66
1627 1816 8.970859 AAAAGATACCTCAACTCATCATAAGG 57.029 34.615 0.00 0.00 0.00 2.69
1718 1907 7.599998 GCTTACCATATAATTCCTTGGCAAATG 59.400 37.037 0.00 0.00 32.26 2.32
1719 1908 7.289782 TGCTTACCATATAATTCCTTGGCAAAT 59.710 33.333 0.00 0.00 32.26 2.32
1731 1920 8.225603 CAAGTGAACCTTGCTTACCATATAAT 57.774 34.615 0.00 0.00 43.84 1.28
1891 2080 0.472471 TCGACTGGAAGGCCTTGTTT 59.528 50.000 26.25 3.65 40.92 2.83
1963 2152 3.950395 GGTGATTCCTCCTTGATTGGAAG 59.050 47.826 0.00 0.00 42.27 3.46
2049 2238 7.340487 GGGGGTATCCTTGATTCATATTCAATC 59.660 40.741 0.00 0.00 32.94 2.67
2106 2295 0.250038 CATGTGTATCCTGAGCCCGG 60.250 60.000 0.00 0.00 0.00 5.73
2109 2298 2.435805 TCCTTCATGTGTATCCTGAGCC 59.564 50.000 0.00 0.00 0.00 4.70
2186 2379 9.809096 AGAGTTACATACATTACACAATCTCAG 57.191 33.333 0.00 0.00 0.00 3.35
2327 2537 9.875691 GTCTGCCCTTTATTCTGAAATTTATTT 57.124 29.630 0.00 0.00 0.00 1.40
2328 2538 8.478066 GGTCTGCCCTTTATTCTGAAATTTATT 58.522 33.333 0.00 0.00 0.00 1.40
2329 2539 8.011844 GGTCTGCCCTTTATTCTGAAATTTAT 57.988 34.615 0.00 0.00 0.00 1.40
2330 2540 7.404671 GGTCTGCCCTTTATTCTGAAATTTA 57.595 36.000 0.00 0.00 0.00 1.40
2331 2541 6.286240 GGTCTGCCCTTTATTCTGAAATTT 57.714 37.500 0.00 0.00 0.00 1.82
2332 2542 5.921962 GGTCTGCCCTTTATTCTGAAATT 57.078 39.130 0.00 0.00 0.00 1.82
2384 2594 8.479313 AAAAGACACAAATTTTCCTTCTGTTC 57.521 30.769 0.00 0.00 0.00 3.18
2430 2640 4.736126 TGATTGTCGAATAAGAGCAGGA 57.264 40.909 0.00 0.00 0.00 3.86
2437 2647 6.110543 TGCTGATGTTGATTGTCGAATAAG 57.889 37.500 0.00 0.00 0.00 1.73
2438 2648 6.493449 TTGCTGATGTTGATTGTCGAATAA 57.507 33.333 0.00 0.00 0.00 1.40
2440 2650 5.375417 TTTGCTGATGTTGATTGTCGAAT 57.625 34.783 0.00 0.00 0.00 3.34
2441 2651 4.827304 TTTGCTGATGTTGATTGTCGAA 57.173 36.364 0.00 0.00 0.00 3.71
2442 2652 4.275689 ACTTTTGCTGATGTTGATTGTCGA 59.724 37.500 0.00 0.00 0.00 4.20
2443 2653 4.380678 CACTTTTGCTGATGTTGATTGTCG 59.619 41.667 0.00 0.00 0.00 4.35
2444 2654 5.284079 ACACTTTTGCTGATGTTGATTGTC 58.716 37.500 0.00 0.00 0.00 3.18
2445 2655 5.266733 ACACTTTTGCTGATGTTGATTGT 57.733 34.783 0.00 0.00 0.00 2.71
2446 2656 4.682860 GGACACTTTTGCTGATGTTGATTG 59.317 41.667 0.00 0.00 0.00 2.67
2447 2657 4.586001 AGGACACTTTTGCTGATGTTGATT 59.414 37.500 0.00 0.00 0.00 2.57
2448 2658 4.147321 AGGACACTTTTGCTGATGTTGAT 58.853 39.130 0.00 0.00 0.00 2.57
2449 2659 3.554934 AGGACACTTTTGCTGATGTTGA 58.445 40.909 0.00 0.00 0.00 3.18
2450 2660 3.567164 AGAGGACACTTTTGCTGATGTTG 59.433 43.478 0.00 0.00 0.00 3.33
2451 2661 3.817647 GAGAGGACACTTTTGCTGATGTT 59.182 43.478 0.00 0.00 0.00 2.71
2452 2662 3.406764 GAGAGGACACTTTTGCTGATGT 58.593 45.455 0.00 0.00 0.00 3.06
2453 2663 2.746362 GGAGAGGACACTTTTGCTGATG 59.254 50.000 0.00 0.00 0.00 3.07
2454 2664 2.641815 AGGAGAGGACACTTTTGCTGAT 59.358 45.455 0.00 0.00 0.00 2.90
2455 2665 2.037772 GAGGAGAGGACACTTTTGCTGA 59.962 50.000 0.00 0.00 0.00 4.26
2456 2666 2.224378 TGAGGAGAGGACACTTTTGCTG 60.224 50.000 0.00 0.00 0.00 4.41
2457 2667 2.050144 TGAGGAGAGGACACTTTTGCT 58.950 47.619 0.00 0.00 0.00 3.91
2458 2668 2.147150 GTGAGGAGAGGACACTTTTGC 58.853 52.381 0.00 0.00 0.00 3.68
2459 2669 3.760580 AGTGAGGAGAGGACACTTTTG 57.239 47.619 0.00 0.00 41.21 2.44
2460 2670 5.186797 CAGATAGTGAGGAGAGGACACTTTT 59.813 44.000 0.00 0.00 43.27 2.27
2461 2671 4.709397 CAGATAGTGAGGAGAGGACACTTT 59.291 45.833 0.00 0.00 43.27 2.66
2462 2672 4.264172 ACAGATAGTGAGGAGAGGACACTT 60.264 45.833 0.00 0.00 43.27 3.16
2463 2673 3.268334 ACAGATAGTGAGGAGAGGACACT 59.732 47.826 0.00 0.00 45.06 3.55
2464 2674 3.626930 ACAGATAGTGAGGAGAGGACAC 58.373 50.000 0.00 0.00 35.15 3.67
2465 2675 4.687494 GCTACAGATAGTGAGGAGAGGACA 60.687 50.000 0.00 0.00 0.00 4.02
2466 2676 3.818773 GCTACAGATAGTGAGGAGAGGAC 59.181 52.174 0.00 0.00 0.00 3.85
2467 2677 3.181438 GGCTACAGATAGTGAGGAGAGGA 60.181 52.174 0.00 0.00 0.00 3.71
2468 2678 3.153919 GGCTACAGATAGTGAGGAGAGG 58.846 54.545 0.00 0.00 0.00 3.69
2469 2679 3.826524 TGGCTACAGATAGTGAGGAGAG 58.173 50.000 0.00 0.00 0.00 3.20
2470 2680 3.953542 TGGCTACAGATAGTGAGGAGA 57.046 47.619 0.00 0.00 0.00 3.71
2488 2698 1.153289 CCATCCTTGCCGAGACTGG 60.153 63.158 0.00 0.00 0.00 4.00
2489 2699 1.817099 GCCATCCTTGCCGAGACTG 60.817 63.158 0.00 0.00 0.00 3.51
2490 2700 1.557269 AAGCCATCCTTGCCGAGACT 61.557 55.000 0.00 0.00 30.99 3.24
2491 2701 0.178068 TAAGCCATCCTTGCCGAGAC 59.822 55.000 0.00 0.00 34.95 3.36
2492 2702 0.178068 GTAAGCCATCCTTGCCGAGA 59.822 55.000 0.00 0.00 34.95 4.04
2493 2703 0.179000 AGTAAGCCATCCTTGCCGAG 59.821 55.000 0.00 0.00 36.90 4.63
2494 2704 1.412710 CTAGTAAGCCATCCTTGCCGA 59.587 52.381 0.00 0.00 36.90 5.54
2495 2705 1.139058 ACTAGTAAGCCATCCTTGCCG 59.861 52.381 0.00 0.00 36.90 5.69
2496 2706 2.170607 TCACTAGTAAGCCATCCTTGCC 59.829 50.000 0.00 0.00 36.90 4.52
2497 2707 3.543680 TCACTAGTAAGCCATCCTTGC 57.456 47.619 0.00 0.00 36.53 4.01
2498 2708 5.245531 TGTTTCACTAGTAAGCCATCCTTG 58.754 41.667 0.00 0.00 34.95 3.61
2499 2709 5.491982 CTGTTTCACTAGTAAGCCATCCTT 58.508 41.667 0.00 0.00 37.57 3.36
2500 2710 4.080863 CCTGTTTCACTAGTAAGCCATCCT 60.081 45.833 0.00 0.00 0.00 3.24
2501 2711 4.081087 TCCTGTTTCACTAGTAAGCCATCC 60.081 45.833 0.00 0.00 0.00 3.51
2502 2712 5.086104 TCCTGTTTCACTAGTAAGCCATC 57.914 43.478 0.00 0.00 0.00 3.51
2503 2713 5.499004 TTCCTGTTTCACTAGTAAGCCAT 57.501 39.130 0.00 0.00 0.00 4.40
2504 2714 4.967084 TTCCTGTTTCACTAGTAAGCCA 57.033 40.909 0.00 0.00 0.00 4.75
2505 2715 6.819397 AATTTCCTGTTTCACTAGTAAGCC 57.181 37.500 0.00 0.00 0.00 4.35
2506 2716 9.608617 GTTTAATTTCCTGTTTCACTAGTAAGC 57.391 33.333 0.00 0.00 0.00 3.09
2510 2720 9.000486 GCTAGTTTAATTTCCTGTTTCACTAGT 58.000 33.333 0.00 0.00 35.59 2.57
2511 2721 8.999431 TGCTAGTTTAATTTCCTGTTTCACTAG 58.001 33.333 0.00 0.00 36.04 2.57
2512 2722 8.911918 TGCTAGTTTAATTTCCTGTTTCACTA 57.088 30.769 0.00 0.00 0.00 2.74
2513 2723 7.817418 TGCTAGTTTAATTTCCTGTTTCACT 57.183 32.000 0.00 0.00 0.00 3.41
2514 2724 8.349983 TCTTGCTAGTTTAATTTCCTGTTTCAC 58.650 33.333 0.00 0.00 0.00 3.18
2515 2725 8.458573 TCTTGCTAGTTTAATTTCCTGTTTCA 57.541 30.769 0.00 0.00 0.00 2.69
2516 2726 9.744468 TTTCTTGCTAGTTTAATTTCCTGTTTC 57.256 29.630 0.00 0.00 0.00 2.78
2517 2727 9.750125 CTTTCTTGCTAGTTTAATTTCCTGTTT 57.250 29.630 0.00 0.00 0.00 2.83
2518 2728 8.360390 CCTTTCTTGCTAGTTTAATTTCCTGTT 58.640 33.333 0.00 0.00 0.00 3.16
2519 2729 7.039714 CCCTTTCTTGCTAGTTTAATTTCCTGT 60.040 37.037 0.00 0.00 0.00 4.00
2520 2730 7.315890 CCCTTTCTTGCTAGTTTAATTTCCTG 58.684 38.462 0.00 0.00 0.00 3.86
2521 2731 6.437477 CCCCTTTCTTGCTAGTTTAATTTCCT 59.563 38.462 0.00 0.00 0.00 3.36
2522 2732 6.210784 ACCCCTTTCTTGCTAGTTTAATTTCC 59.789 38.462 0.00 0.00 0.00 3.13
2523 2733 7.176865 AGACCCCTTTCTTGCTAGTTTAATTTC 59.823 37.037 0.00 0.00 0.00 2.17
2524 2734 7.010771 AGACCCCTTTCTTGCTAGTTTAATTT 58.989 34.615 0.00 0.00 0.00 1.82
2525 2735 6.552932 AGACCCCTTTCTTGCTAGTTTAATT 58.447 36.000 0.00 0.00 0.00 1.40
2526 2736 6.140968 AGACCCCTTTCTTGCTAGTTTAAT 57.859 37.500 0.00 0.00 0.00 1.40
2527 2737 5.578157 AGACCCCTTTCTTGCTAGTTTAA 57.422 39.130 0.00 0.00 0.00 1.52
2528 2738 6.650120 CATAGACCCCTTTCTTGCTAGTTTA 58.350 40.000 0.00 0.00 0.00 2.01
2529 2739 5.501156 CATAGACCCCTTTCTTGCTAGTTT 58.499 41.667 0.00 0.00 0.00 2.66
2530 2740 4.626529 GCATAGACCCCTTTCTTGCTAGTT 60.627 45.833 0.00 0.00 31.95 2.24
2531 2741 3.118223 GCATAGACCCCTTTCTTGCTAGT 60.118 47.826 0.00 0.00 31.95 2.57
2532 2742 3.118261 TGCATAGACCCCTTTCTTGCTAG 60.118 47.826 0.00 0.00 33.95 3.42
2533 2743 2.843730 TGCATAGACCCCTTTCTTGCTA 59.156 45.455 0.00 0.00 33.95 3.49
2534 2744 1.635487 TGCATAGACCCCTTTCTTGCT 59.365 47.619 0.00 0.00 33.95 3.91
2535 2745 2.128771 TGCATAGACCCCTTTCTTGC 57.871 50.000 0.00 0.00 33.67 4.01
2536 2746 3.889815 TGATGCATAGACCCCTTTCTTG 58.110 45.455 0.00 0.00 0.00 3.02
2537 2747 4.414846 AGATGATGCATAGACCCCTTTCTT 59.585 41.667 0.00 0.00 0.00 2.52
2538 2748 3.979347 AGATGATGCATAGACCCCTTTCT 59.021 43.478 0.00 0.00 0.00 2.52
2539 2749 4.363991 AGATGATGCATAGACCCCTTTC 57.636 45.455 0.00 0.00 0.00 2.62
2540 2750 6.351371 CGTATAGATGATGCATAGACCCCTTT 60.351 42.308 0.00 0.00 0.00 3.11
2541 2751 5.127845 CGTATAGATGATGCATAGACCCCTT 59.872 44.000 0.00 0.00 0.00 3.95
2542 2752 4.646945 CGTATAGATGATGCATAGACCCCT 59.353 45.833 0.00 0.00 0.00 4.79
2543 2753 4.402793 ACGTATAGATGATGCATAGACCCC 59.597 45.833 0.00 0.00 0.00 4.95
2544 2754 5.105716 ACACGTATAGATGATGCATAGACCC 60.106 44.000 0.00 0.00 0.00 4.46
2545 2755 5.955488 ACACGTATAGATGATGCATAGACC 58.045 41.667 0.00 0.00 0.00 3.85
2546 2756 7.875316 AAACACGTATAGATGATGCATAGAC 57.125 36.000 0.00 0.00 0.00 2.59
2547 2757 7.095649 GCAAAACACGTATAGATGATGCATAGA 60.096 37.037 0.00 0.00 0.00 1.98
2548 2758 7.011773 GCAAAACACGTATAGATGATGCATAG 58.988 38.462 0.00 0.00 0.00 2.23
2549 2759 6.705825 AGCAAAACACGTATAGATGATGCATA 59.294 34.615 0.00 0.00 0.00 3.14
2550 2760 5.528690 AGCAAAACACGTATAGATGATGCAT 59.471 36.000 0.00 0.00 0.00 3.96
2551 2761 4.875536 AGCAAAACACGTATAGATGATGCA 59.124 37.500 0.00 0.00 0.00 3.96
2552 2762 5.006649 TGAGCAAAACACGTATAGATGATGC 59.993 40.000 0.00 0.00 0.00 3.91
2553 2763 6.588348 TGAGCAAAACACGTATAGATGATG 57.412 37.500 0.00 0.00 0.00 3.07
2554 2764 7.385205 GGTATGAGCAAAACACGTATAGATGAT 59.615 37.037 0.00 0.00 0.00 2.45
2555 2765 6.700081 GGTATGAGCAAAACACGTATAGATGA 59.300 38.462 0.00 0.00 0.00 2.92
2556 2766 6.345803 CGGTATGAGCAAAACACGTATAGATG 60.346 42.308 0.00 0.00 0.00 2.90
2557 2767 5.690409 CGGTATGAGCAAAACACGTATAGAT 59.310 40.000 0.00 0.00 0.00 1.98
2558 2768 5.038683 CGGTATGAGCAAAACACGTATAGA 58.961 41.667 0.00 0.00 0.00 1.98
2559 2769 4.208460 CCGGTATGAGCAAAACACGTATAG 59.792 45.833 0.00 0.00 0.00 1.31
2560 2770 4.114073 CCGGTATGAGCAAAACACGTATA 58.886 43.478 0.00 0.00 0.00 1.47
2561 2771 2.933906 CCGGTATGAGCAAAACACGTAT 59.066 45.455 0.00 0.00 0.00 3.06
2562 2772 2.288948 ACCGGTATGAGCAAAACACGTA 60.289 45.455 4.49 0.00 0.00 3.57
2563 2773 1.153353 CCGGTATGAGCAAAACACGT 58.847 50.000 0.00 0.00 0.00 4.49
2564 2774 1.136085 CACCGGTATGAGCAAAACACG 60.136 52.381 6.87 0.00 0.00 4.49
2565 2775 1.401018 GCACCGGTATGAGCAAAACAC 60.401 52.381 6.87 0.00 0.00 3.32
2566 2776 0.878416 GCACCGGTATGAGCAAAACA 59.122 50.000 6.87 0.00 0.00 2.83
2567 2777 0.878416 TGCACCGGTATGAGCAAAAC 59.122 50.000 14.38 0.00 33.48 2.43
2568 2778 1.832883 ATGCACCGGTATGAGCAAAA 58.167 45.000 19.77 0.00 40.76 2.44
2569 2779 2.700722 TATGCACCGGTATGAGCAAA 57.299 45.000 19.77 0.00 40.76 3.68
2570 2780 2.928801 ATATGCACCGGTATGAGCAA 57.071 45.000 19.77 10.60 40.76 3.91
2571 2781 4.344359 TTTATATGCACCGGTATGAGCA 57.656 40.909 18.42 18.42 41.73 4.26
2572 2782 4.994852 TCTTTTATATGCACCGGTATGAGC 59.005 41.667 6.87 7.35 0.00 4.26
2573 2783 5.120830 GCTCTTTTATATGCACCGGTATGAG 59.879 44.000 6.87 7.50 0.00 2.90
2574 2784 4.994852 GCTCTTTTATATGCACCGGTATGA 59.005 41.667 6.87 0.00 0.00 2.15
2575 2785 4.754618 TGCTCTTTTATATGCACCGGTATG 59.245 41.667 6.87 0.00 0.00 2.39
2576 2786 4.968259 TGCTCTTTTATATGCACCGGTAT 58.032 39.130 6.87 0.00 0.00 2.73
2577 2787 4.409718 TGCTCTTTTATATGCACCGGTA 57.590 40.909 6.87 0.00 0.00 4.02
2578 2788 3.275617 TGCTCTTTTATATGCACCGGT 57.724 42.857 0.00 0.00 0.00 5.28
2579 2789 3.376859 TGTTGCTCTTTTATATGCACCGG 59.623 43.478 0.00 0.00 35.01 5.28
2580 2790 4.614555 TGTTGCTCTTTTATATGCACCG 57.385 40.909 0.00 0.00 35.01 4.94
2581 2791 7.707104 AGTATTGTTGCTCTTTTATATGCACC 58.293 34.615 0.00 0.00 35.01 5.01
2582 2792 9.651718 GTAGTATTGTTGCTCTTTTATATGCAC 57.348 33.333 0.00 0.00 35.01 4.57
2583 2793 8.547894 CGTAGTATTGTTGCTCTTTTATATGCA 58.452 33.333 0.00 0.00 0.00 3.96
2584 2794 8.548721 ACGTAGTATTGTTGCTCTTTTATATGC 58.451 33.333 0.00 0.00 41.94 3.14
2585 2795 9.849607 CACGTAGTATTGTTGCTCTTTTATATG 57.150 33.333 0.00 0.00 41.61 1.78
2586 2796 9.595823 ACACGTAGTATTGTTGCTCTTTTATAT 57.404 29.630 0.00 0.00 41.61 0.86
2587 2797 8.865978 CACACGTAGTATTGTTGCTCTTTTATA 58.134 33.333 0.00 0.00 41.61 0.98
2588 2798 7.386848 ACACACGTAGTATTGTTGCTCTTTTAT 59.613 33.333 0.00 0.00 41.61 1.40
2589 2799 6.702723 ACACACGTAGTATTGTTGCTCTTTTA 59.297 34.615 0.00 0.00 41.61 1.52
2590 2800 5.526111 ACACACGTAGTATTGTTGCTCTTTT 59.474 36.000 0.00 0.00 41.61 2.27
2591 2801 5.054477 ACACACGTAGTATTGTTGCTCTTT 58.946 37.500 0.00 0.00 41.61 2.52
2592 2802 4.628074 ACACACGTAGTATTGTTGCTCTT 58.372 39.130 0.00 0.00 41.61 2.85
2593 2803 4.252971 ACACACGTAGTATTGTTGCTCT 57.747 40.909 0.00 0.00 41.61 4.09
2615 2825 5.004361 TGGAATGGAACCATGGAGTTTAA 57.996 39.130 21.47 0.00 36.68 1.52
2629 2839 4.576053 CGTTGCTTGATTAGATGGAATGGA 59.424 41.667 0.00 0.00 0.00 3.41
2653 2863 4.661125 TGCTCTTTTATATGCAGCGTTTG 58.339 39.130 0.00 0.00 32.43 2.93
2681 2891 1.399791 CAGGAAAAATCAGAGCTCCGC 59.600 52.381 10.93 0.00 0.00 5.54
2761 2971 3.947132 CCAGGTCCACTGCGAGCAG 62.947 68.421 22.01 22.01 46.14 4.24
2762 2972 4.007644 CCAGGTCCACTGCGAGCA 62.008 66.667 0.00 0.00 46.14 4.26
2764 2974 4.767255 GGCCAGGTCCACTGCGAG 62.767 72.222 0.00 0.00 46.14 5.03
2767 2977 4.729918 CCTGGCCAGGTCCACTGC 62.730 72.222 39.52 0.00 46.14 4.40
2787 2997 4.479993 CAAGCCAGGCGAGGGAGG 62.480 72.222 5.55 0.00 0.00 4.30
2788 2998 2.262774 ATTCAAGCCAGGCGAGGGAG 62.263 60.000 5.55 0.00 0.00 4.30
2789 2999 2.257409 GATTCAAGCCAGGCGAGGGA 62.257 60.000 5.55 0.00 0.00 4.20
2790 3000 1.821332 GATTCAAGCCAGGCGAGGG 60.821 63.158 5.55 0.00 0.00 4.30
2791 3001 1.821332 GGATTCAAGCCAGGCGAGG 60.821 63.158 5.55 0.00 0.00 4.63
2792 3002 2.176273 CGGATTCAAGCCAGGCGAG 61.176 63.158 5.55 2.38 0.00 5.03
2793 3003 2.125147 CGGATTCAAGCCAGGCGA 60.125 61.111 5.55 0.00 0.00 5.54
2794 3004 3.204827 CCGGATTCAAGCCAGGCG 61.205 66.667 5.55 0.00 0.00 5.52
2795 3005 2.608970 TAGCCGGATTCAAGCCAGGC 62.609 60.000 16.80 16.80 41.91 4.85
2796 3006 0.815615 GTAGCCGGATTCAAGCCAGG 60.816 60.000 5.05 0.00 0.00 4.45
2797 3007 1.154205 CGTAGCCGGATTCAAGCCAG 61.154 60.000 5.05 0.00 0.00 4.85
2798 3008 1.153449 CGTAGCCGGATTCAAGCCA 60.153 57.895 5.05 0.00 0.00 4.75
2799 3009 1.143183 TCGTAGCCGGATTCAAGCC 59.857 57.895 5.05 0.00 33.95 4.35
2800 3010 1.152383 GGTCGTAGCCGGATTCAAGC 61.152 60.000 5.05 0.00 33.95 4.01
2801 3011 0.174845 TGGTCGTAGCCGGATTCAAG 59.825 55.000 5.05 0.00 33.95 3.02
2802 3012 0.828022 ATGGTCGTAGCCGGATTCAA 59.172 50.000 5.05 0.00 33.95 2.69
2803 3013 0.104120 CATGGTCGTAGCCGGATTCA 59.896 55.000 5.05 0.00 33.95 2.57
2804 3014 0.600255 CCATGGTCGTAGCCGGATTC 60.600 60.000 5.05 0.00 33.95 2.52
2805 3015 1.445942 CCATGGTCGTAGCCGGATT 59.554 57.895 5.05 0.00 33.95 3.01
2806 3016 2.507854 CCCATGGTCGTAGCCGGAT 61.508 63.158 5.05 0.00 33.95 4.18
2807 3017 3.151710 CCCATGGTCGTAGCCGGA 61.152 66.667 5.05 0.00 33.95 5.14
2808 3018 3.441011 GACCCATGGTCGTAGCCGG 62.441 68.421 11.73 0.00 43.14 6.13
2809 3019 2.106332 GACCCATGGTCGTAGCCG 59.894 66.667 11.73 0.00 43.14 5.52
2848 3058 1.973281 AAACCACCATGGCGAGCTG 60.973 57.895 13.04 1.37 42.67 4.24
2849 3059 1.973281 CAAACCACCATGGCGAGCT 60.973 57.895 13.04 0.00 42.67 4.09
2850 3060 1.926511 CTCAAACCACCATGGCGAGC 61.927 60.000 13.04 0.00 42.67 5.03
2851 3061 1.308069 CCTCAAACCACCATGGCGAG 61.308 60.000 13.04 8.14 42.67 5.03
2852 3062 1.303236 CCTCAAACCACCATGGCGA 60.303 57.895 13.04 0.00 42.67 5.54
2853 3063 1.178534 AACCTCAAACCACCATGGCG 61.179 55.000 13.04 0.90 42.67 5.69
2854 3064 0.318120 CAACCTCAAACCACCATGGC 59.682 55.000 13.04 0.00 42.67 4.40
2855 3065 0.968405 CCAACCTCAAACCACCATGG 59.032 55.000 11.19 11.19 45.02 3.66
2856 3066 0.968405 CCCAACCTCAAACCACCATG 59.032 55.000 0.00 0.00 0.00 3.66
2857 3067 0.178935 CCCCAACCTCAAACCACCAT 60.179 55.000 0.00 0.00 0.00 3.55
2858 3068 1.231641 CCCCAACCTCAAACCACCA 59.768 57.895 0.00 0.00 0.00 4.17
2859 3069 1.533033 CCCCCAACCTCAAACCACC 60.533 63.158 0.00 0.00 0.00 4.61
2860 3070 0.105913 TTCCCCCAACCTCAAACCAC 60.106 55.000 0.00 0.00 0.00 4.16
2861 3071 0.637195 TTTCCCCCAACCTCAAACCA 59.363 50.000 0.00 0.00 0.00 3.67
2862 3072 1.338107 CTTTCCCCCAACCTCAAACC 58.662 55.000 0.00 0.00 0.00 3.27
2863 3073 1.133294 TCCTTTCCCCCAACCTCAAAC 60.133 52.381 0.00 0.00 0.00 2.93
2864 3074 1.236708 TCCTTTCCCCCAACCTCAAA 58.763 50.000 0.00 0.00 0.00 2.69
2865 3075 1.466858 ATCCTTTCCCCCAACCTCAA 58.533 50.000 0.00 0.00 0.00 3.02
2866 3076 1.357761 GAATCCTTTCCCCCAACCTCA 59.642 52.381 0.00 0.00 0.00 3.86
2867 3077 1.357761 TGAATCCTTTCCCCCAACCTC 59.642 52.381 0.00 0.00 0.00 3.85
2868 3078 1.466858 TGAATCCTTTCCCCCAACCT 58.533 50.000 0.00 0.00 0.00 3.50
2869 3079 2.501316 CAATGAATCCTTTCCCCCAACC 59.499 50.000 0.00 0.00 0.00 3.77
2870 3080 2.093500 GCAATGAATCCTTTCCCCCAAC 60.093 50.000 0.00 0.00 0.00 3.77
2871 3081 2.187100 GCAATGAATCCTTTCCCCCAA 58.813 47.619 0.00 0.00 0.00 4.12
2872 3082 1.362237 AGCAATGAATCCTTTCCCCCA 59.638 47.619 0.00 0.00 0.00 4.96
2873 3083 1.758862 CAGCAATGAATCCTTTCCCCC 59.241 52.381 0.00 0.00 0.00 5.40
2874 3084 1.758862 CCAGCAATGAATCCTTTCCCC 59.241 52.381 0.00 0.00 0.00 4.81
2875 3085 2.460669 ACCAGCAATGAATCCTTTCCC 58.539 47.619 0.00 0.00 0.00 3.97
2876 3086 4.336713 GTCTACCAGCAATGAATCCTTTCC 59.663 45.833 0.00 0.00 0.00 3.13
2877 3087 4.943705 TGTCTACCAGCAATGAATCCTTTC 59.056 41.667 0.00 0.00 0.00 2.62
2878 3088 4.702131 GTGTCTACCAGCAATGAATCCTTT 59.298 41.667 0.00 0.00 0.00 3.11
2879 3089 4.018960 AGTGTCTACCAGCAATGAATCCTT 60.019 41.667 0.00 0.00 0.00 3.36
2880 3090 3.521126 AGTGTCTACCAGCAATGAATCCT 59.479 43.478 0.00 0.00 0.00 3.24
2881 3091 3.624861 CAGTGTCTACCAGCAATGAATCC 59.375 47.826 0.00 0.00 33.17 3.01
2882 3092 4.331168 GTCAGTGTCTACCAGCAATGAATC 59.669 45.833 0.00 0.00 40.56 2.52
2883 3093 4.256920 GTCAGTGTCTACCAGCAATGAAT 58.743 43.478 0.00 0.00 40.56 2.57
2884 3094 3.557054 GGTCAGTGTCTACCAGCAATGAA 60.557 47.826 0.00 0.00 40.56 2.57
2885 3095 2.028112 GGTCAGTGTCTACCAGCAATGA 60.028 50.000 0.00 0.00 37.37 2.57
2886 3096 2.289631 TGGTCAGTGTCTACCAGCAATG 60.290 50.000 0.00 0.00 40.84 2.82
2887 3097 1.977854 TGGTCAGTGTCTACCAGCAAT 59.022 47.619 0.00 0.00 40.84 3.56
2888 3098 1.070134 GTGGTCAGTGTCTACCAGCAA 59.930 52.381 2.49 0.00 46.19 3.91
2889 3099 0.679505 GTGGTCAGTGTCTACCAGCA 59.320 55.000 2.49 0.00 46.19 4.41
2890 3100 0.969894 AGTGGTCAGTGTCTACCAGC 59.030 55.000 2.49 0.00 46.19 4.85
2891 3101 1.273606 CCAGTGGTCAGTGTCTACCAG 59.726 57.143 0.00 0.00 46.19 4.00
2892 3102 1.338107 CCAGTGGTCAGTGTCTACCA 58.662 55.000 0.00 0.00 43.47 3.25
2893 3103 0.608640 CCCAGTGGTCAGTGTCTACC 59.391 60.000 8.74 0.00 36.24 3.18
2894 3104 0.037232 GCCCAGTGGTCAGTGTCTAC 60.037 60.000 8.74 0.00 0.00 2.59
2895 3105 1.192146 GGCCCAGTGGTCAGTGTCTA 61.192 60.000 8.74 0.00 35.79 2.59
2896 3106 2.520536 GGCCCAGTGGTCAGTGTCT 61.521 63.158 8.74 0.00 35.79 3.41
2897 3107 2.032681 GGCCCAGTGGTCAGTGTC 59.967 66.667 8.74 0.00 35.79 3.67
2898 3108 3.570212 GGGCCCAGTGGTCAGTGT 61.570 66.667 19.95 0.00 38.32 3.55
2899 3109 4.704833 CGGGCCCAGTGGTCAGTG 62.705 72.222 24.92 0.00 38.32 3.66
2915 3125 2.127534 CGTTTCCGTTTTCCCGCG 60.128 61.111 0.00 0.00 0.00 6.46
2916 3126 2.062361 AACCGTTTCCGTTTTCCCGC 62.062 55.000 0.00 0.00 0.00 6.13
2917 3127 0.381445 AAACCGTTTCCGTTTTCCCG 59.619 50.000 0.00 0.00 0.00 5.14
2918 3128 1.536496 CCAAACCGTTTCCGTTTTCCC 60.536 52.381 0.00 0.00 0.00 3.97
2919 3129 1.842720 CCAAACCGTTTCCGTTTTCC 58.157 50.000 0.00 0.00 0.00 3.13
2920 3130 1.202203 GCCAAACCGTTTCCGTTTTC 58.798 50.000 0.00 0.00 0.00 2.29
2921 3131 0.818938 AGCCAAACCGTTTCCGTTTT 59.181 45.000 0.00 0.00 0.00 2.43
2922 3132 1.334556 GTAGCCAAACCGTTTCCGTTT 59.665 47.619 0.00 0.00 0.00 3.60
2923 3133 0.946528 GTAGCCAAACCGTTTCCGTT 59.053 50.000 0.00 0.00 0.00 4.44
2924 3134 1.223417 CGTAGCCAAACCGTTTCCGT 61.223 55.000 0.00 0.00 0.00 4.69
2925 3135 1.223417 ACGTAGCCAAACCGTTTCCG 61.223 55.000 0.00 0.00 0.00 4.30
2926 3136 0.236449 CACGTAGCCAAACCGTTTCC 59.764 55.000 0.00 0.00 31.46 3.13
2927 3137 1.219646 TCACGTAGCCAAACCGTTTC 58.780 50.000 0.00 0.00 31.46 2.78
2928 3138 1.666054 TTCACGTAGCCAAACCGTTT 58.334 45.000 0.00 0.00 31.46 3.60
2929 3139 1.533731 CATTCACGTAGCCAAACCGTT 59.466 47.619 0.00 0.00 31.46 4.44
2930 3140 1.153353 CATTCACGTAGCCAAACCGT 58.847 50.000 0.00 0.00 34.71 4.83
2931 3141 0.446222 CCATTCACGTAGCCAAACCG 59.554 55.000 0.00 0.00 0.00 4.44
2932 3142 0.170339 GCCATTCACGTAGCCAAACC 59.830 55.000 0.00 0.00 0.00 3.27
2933 3143 0.878416 TGCCATTCACGTAGCCAAAC 59.122 50.000 0.00 0.00 0.00 2.93
2934 3144 1.164411 CTGCCATTCACGTAGCCAAA 58.836 50.000 0.00 0.00 0.00 3.28
2935 3145 0.323302 TCTGCCATTCACGTAGCCAA 59.677 50.000 0.00 0.00 0.00 4.52
2936 3146 0.323302 TTCTGCCATTCACGTAGCCA 59.677 50.000 0.00 0.00 0.00 4.75
2937 3147 0.727398 GTTCTGCCATTCACGTAGCC 59.273 55.000 0.00 0.00 0.00 3.93
2938 3148 1.438651 TGTTCTGCCATTCACGTAGC 58.561 50.000 0.00 0.00 0.00 3.58
2939 3149 3.067106 ACTTGTTCTGCCATTCACGTAG 58.933 45.455 0.00 0.00 0.00 3.51
2940 3150 3.120321 ACTTGTTCTGCCATTCACGTA 57.880 42.857 0.00 0.00 0.00 3.57
2941 3151 1.967319 ACTTGTTCTGCCATTCACGT 58.033 45.000 0.00 0.00 0.00 4.49
2942 3152 2.605338 CCAACTTGTTCTGCCATTCACG 60.605 50.000 0.00 0.00 0.00 4.35
2943 3153 2.288395 CCCAACTTGTTCTGCCATTCAC 60.288 50.000 0.00 0.00 0.00 3.18
2944 3154 1.962807 CCCAACTTGTTCTGCCATTCA 59.037 47.619 0.00 0.00 0.00 2.57
2945 3155 1.337167 GCCCAACTTGTTCTGCCATTC 60.337 52.381 0.00 0.00 0.00 2.67
2946 3156 0.681175 GCCCAACTTGTTCTGCCATT 59.319 50.000 0.00 0.00 0.00 3.16
2947 3157 1.187567 GGCCCAACTTGTTCTGCCAT 61.188 55.000 14.31 0.00 38.73 4.40
2948 3158 1.832167 GGCCCAACTTGTTCTGCCA 60.832 57.895 14.31 0.00 38.73 4.92
2949 3159 2.919494 CGGCCCAACTTGTTCTGCC 61.919 63.158 0.00 10.89 35.55 4.85
2950 3160 1.452145 TTCGGCCCAACTTGTTCTGC 61.452 55.000 0.00 0.00 0.00 4.26
2951 3161 1.028905 TTTCGGCCCAACTTGTTCTG 58.971 50.000 0.00 0.00 0.00 3.02
2952 3162 1.613437 CATTTCGGCCCAACTTGTTCT 59.387 47.619 0.00 0.00 0.00 3.01
2953 3163 1.339929 ACATTTCGGCCCAACTTGTTC 59.660 47.619 0.00 0.00 0.00 3.18
2954 3164 1.339929 GACATTTCGGCCCAACTTGTT 59.660 47.619 0.00 0.00 0.00 2.83
2955 3165 0.958822 GACATTTCGGCCCAACTTGT 59.041 50.000 0.00 0.00 0.00 3.16
2956 3166 1.068333 CAGACATTTCGGCCCAACTTG 60.068 52.381 0.00 0.00 0.00 3.16
2957 3167 1.247567 CAGACATTTCGGCCCAACTT 58.752 50.000 0.00 0.00 0.00 2.66
2958 3168 0.110486 ACAGACATTTCGGCCCAACT 59.890 50.000 0.00 0.00 0.00 3.16
2959 3169 0.521735 GACAGACATTTCGGCCCAAC 59.478 55.000 0.00 0.00 0.00 3.77
2960 3170 0.109532 TGACAGACATTTCGGCCCAA 59.890 50.000 0.00 0.00 0.00 4.12
2961 3171 0.321564 CTGACAGACATTTCGGCCCA 60.322 55.000 0.00 0.00 0.00 5.36
2962 3172 1.648467 GCTGACAGACATTTCGGCCC 61.648 60.000 6.65 0.00 38.06 5.80
2963 3173 1.796796 GCTGACAGACATTTCGGCC 59.203 57.895 6.65 0.00 38.06 6.13
2964 3174 1.796796 GGCTGACAGACATTTCGGC 59.203 57.895 6.65 0.00 42.50 5.54
2965 3175 0.389817 TCGGCTGACAGACATTTCGG 60.390 55.000 9.48 0.00 0.00 4.30
2966 3176 0.994995 CTCGGCTGACAGACATTTCG 59.005 55.000 9.48 1.41 0.00 3.46
2967 3177 2.370281 TCTCGGCTGACAGACATTTC 57.630 50.000 9.48 0.00 0.00 2.17
2968 3178 2.808543 GTTTCTCGGCTGACAGACATTT 59.191 45.455 9.48 0.00 0.00 2.32
2969 3179 2.224281 TGTTTCTCGGCTGACAGACATT 60.224 45.455 9.48 0.00 0.00 2.71
2970 3180 1.344438 TGTTTCTCGGCTGACAGACAT 59.656 47.619 9.48 0.00 0.00 3.06
2971 3181 0.750249 TGTTTCTCGGCTGACAGACA 59.250 50.000 9.48 0.00 0.00 3.41
2972 3182 1.865865 TTGTTTCTCGGCTGACAGAC 58.134 50.000 6.65 1.15 0.00 3.51
2973 3183 2.613026 TTTGTTTCTCGGCTGACAGA 57.387 45.000 6.65 0.00 0.00 3.41
2974 3184 3.558505 CATTTTGTTTCTCGGCTGACAG 58.441 45.455 0.00 0.00 0.00 3.51
2975 3185 2.293122 CCATTTTGTTTCTCGGCTGACA 59.707 45.455 0.00 0.00 0.00 3.58
2976 3186 2.552315 TCCATTTTGTTTCTCGGCTGAC 59.448 45.455 0.00 0.00 0.00 3.51
2977 3187 2.552315 GTCCATTTTGTTTCTCGGCTGA 59.448 45.455 0.00 0.00 0.00 4.26
2978 3188 2.554032 AGTCCATTTTGTTTCTCGGCTG 59.446 45.455 0.00 0.00 0.00 4.85
2979 3189 2.814336 GAGTCCATTTTGTTTCTCGGCT 59.186 45.455 0.00 0.00 0.00 5.52
2980 3190 2.814336 AGAGTCCATTTTGTTTCTCGGC 59.186 45.455 0.00 0.00 0.00 5.54
2981 3191 4.093556 GCTAGAGTCCATTTTGTTTCTCGG 59.906 45.833 0.00 0.00 0.00 4.63
2982 3192 4.932200 AGCTAGAGTCCATTTTGTTTCTCG 59.068 41.667 0.00 0.00 0.00 4.04
2983 3193 6.809630 AAGCTAGAGTCCATTTTGTTTCTC 57.190 37.500 0.00 0.00 0.00 2.87
2984 3194 6.881602 CCTAAGCTAGAGTCCATTTTGTTTCT 59.118 38.462 0.00 0.00 0.00 2.52
2985 3195 6.403746 GCCTAAGCTAGAGTCCATTTTGTTTC 60.404 42.308 0.00 0.00 35.50 2.78
2986 3196 5.416013 GCCTAAGCTAGAGTCCATTTTGTTT 59.584 40.000 0.00 0.00 35.50 2.83
2987 3197 4.944317 GCCTAAGCTAGAGTCCATTTTGTT 59.056 41.667 0.00 0.00 35.50 2.83
2988 3198 4.518249 GCCTAAGCTAGAGTCCATTTTGT 58.482 43.478 0.00 0.00 35.50 2.83
3008 3218 3.574396 GCCCAGGAAAGGATTATTAAGCC 59.426 47.826 2.37 2.37 37.16 4.35
3009 3219 3.574396 GGCCCAGGAAAGGATTATTAAGC 59.426 47.826 0.00 0.00 0.00 3.09
3010 3220 3.821033 CGGCCCAGGAAAGGATTATTAAG 59.179 47.826 0.00 0.00 0.00 1.85
3011 3221 3.435890 CCGGCCCAGGAAAGGATTATTAA 60.436 47.826 0.00 0.00 0.00 1.40
3012 3222 2.107552 CCGGCCCAGGAAAGGATTATTA 59.892 50.000 0.00 0.00 0.00 0.98
3013 3223 1.133482 CCGGCCCAGGAAAGGATTATT 60.133 52.381 0.00 0.00 0.00 1.40
3014 3224 0.478507 CCGGCCCAGGAAAGGATTAT 59.521 55.000 0.00 0.00 0.00 1.28
3015 3225 1.641552 CCCGGCCCAGGAAAGGATTA 61.642 60.000 0.00 0.00 0.00 1.75
3016 3226 2.683475 CCGGCCCAGGAAAGGATT 59.317 61.111 0.00 0.00 0.00 3.01
3017 3227 3.420482 CCCGGCCCAGGAAAGGAT 61.420 66.667 0.00 0.00 0.00 3.24
3018 3228 3.962530 ATCCCGGCCCAGGAAAGGA 62.963 63.158 13.02 1.01 36.85 3.36
3019 3229 3.420482 ATCCCGGCCCAGGAAAGG 61.420 66.667 13.02 0.00 36.85 3.11
3020 3230 2.124151 CATCCCGGCCCAGGAAAG 60.124 66.667 13.02 5.71 36.85 2.62
3021 3231 2.087857 AAACATCCCGGCCCAGGAAA 62.088 55.000 13.02 0.00 36.85 3.13
3022 3232 2.087857 AAAACATCCCGGCCCAGGAA 62.088 55.000 13.02 0.00 36.85 3.36
3023 3233 2.543797 AAAACATCCCGGCCCAGGA 61.544 57.895 11.49 11.49 37.93 3.86
3024 3234 2.037208 AAAACATCCCGGCCCAGG 59.963 61.111 0.00 0.00 0.00 4.45
3025 3235 2.350458 CCAAAACATCCCGGCCCAG 61.350 63.158 0.00 0.00 0.00 4.45
3026 3236 2.283532 CCAAAACATCCCGGCCCA 60.284 61.111 0.00 0.00 0.00 5.36
3027 3237 3.074369 CCCAAAACATCCCGGCCC 61.074 66.667 0.00 0.00 0.00 5.80
3028 3238 3.770040 GCCCAAAACATCCCGGCC 61.770 66.667 0.00 0.00 33.30 6.13
3029 3239 2.679996 AGCCCAAAACATCCCGGC 60.680 61.111 0.00 0.00 40.03 6.13
3030 3240 2.350458 CCAGCCCAAAACATCCCGG 61.350 63.158 0.00 0.00 0.00 5.73
3031 3241 2.350458 CCCAGCCCAAAACATCCCG 61.350 63.158 0.00 0.00 0.00 5.14
3032 3242 2.659063 GCCCAGCCCAAAACATCCC 61.659 63.158 0.00 0.00 0.00 3.85
3033 3243 1.912763 TGCCCAGCCCAAAACATCC 60.913 57.895 0.00 0.00 0.00 3.51
3034 3244 1.187567 AGTGCCCAGCCCAAAACATC 61.188 55.000 0.00 0.00 0.00 3.06
3035 3245 0.114168 TAGTGCCCAGCCCAAAACAT 59.886 50.000 0.00 0.00 0.00 2.71
3036 3246 0.539438 CTAGTGCCCAGCCCAAAACA 60.539 55.000 0.00 0.00 0.00 2.83
3037 3247 0.251165 TCTAGTGCCCAGCCCAAAAC 60.251 55.000 0.00 0.00 0.00 2.43
3038 3248 0.480690 TTCTAGTGCCCAGCCCAAAA 59.519 50.000 0.00 0.00 0.00 2.44
3039 3249 0.480690 TTTCTAGTGCCCAGCCCAAA 59.519 50.000 0.00 0.00 0.00 3.28
3040 3250 0.251165 GTTTCTAGTGCCCAGCCCAA 60.251 55.000 0.00 0.00 0.00 4.12
3041 3251 1.378762 GTTTCTAGTGCCCAGCCCA 59.621 57.895 0.00 0.00 0.00 5.36
3042 3252 1.378646 GGTTTCTAGTGCCCAGCCC 60.379 63.158 0.00 0.00 0.00 5.19
3043 3253 0.678048 CAGGTTTCTAGTGCCCAGCC 60.678 60.000 0.00 0.00 0.00 4.85
3044 3254 0.678048 CCAGGTTTCTAGTGCCCAGC 60.678 60.000 0.00 0.00 0.00 4.85
3045 3255 0.984230 TCCAGGTTTCTAGTGCCCAG 59.016 55.000 0.00 0.00 0.00 4.45
3046 3256 1.440618 TTCCAGGTTTCTAGTGCCCA 58.559 50.000 0.00 0.00 0.00 5.36
3047 3257 2.579410 TTTCCAGGTTTCTAGTGCCC 57.421 50.000 0.00 0.00 0.00 5.36
3065 3275 4.658435 GGGCTGGGGTTTGGATATATTTTT 59.342 41.667 0.00 0.00 0.00 1.94
3066 3276 4.231273 GGGCTGGGGTTTGGATATATTTT 58.769 43.478 0.00 0.00 0.00 1.82
3067 3277 3.753846 CGGGCTGGGGTTTGGATATATTT 60.754 47.826 0.00 0.00 0.00 1.40
3068 3278 2.225017 CGGGCTGGGGTTTGGATATATT 60.225 50.000 0.00 0.00 0.00 1.28
3069 3279 1.354368 CGGGCTGGGGTTTGGATATAT 59.646 52.381 0.00 0.00 0.00 0.86
3070 3280 0.768622 CGGGCTGGGGTTTGGATATA 59.231 55.000 0.00 0.00 0.00 0.86
3071 3281 1.536676 CGGGCTGGGGTTTGGATAT 59.463 57.895 0.00 0.00 0.00 1.63
3072 3282 2.685534 CCGGGCTGGGGTTTGGATA 61.686 63.158 3.77 0.00 0.00 2.59
3073 3283 4.060667 CCGGGCTGGGGTTTGGAT 62.061 66.667 3.77 0.00 0.00 3.41
3081 3291 2.357593 ATATTTCAGGCCGGGCTGGG 62.358 60.000 45.92 29.51 38.63 4.45
3082 3292 0.400213 TATATTTCAGGCCGGGCTGG 59.600 55.000 45.92 31.66 42.50 4.85
3083 3293 2.086869 CATATATTTCAGGCCGGGCTG 58.913 52.381 43.64 43.64 0.00 4.85
3084 3294 1.614317 GCATATATTTCAGGCCGGGCT 60.614 52.381 27.45 27.45 0.00 5.19
3085 3295 0.811281 GCATATATTTCAGGCCGGGC 59.189 55.000 22.67 22.67 0.00 6.13
3086 3296 2.198827 TGCATATATTTCAGGCCGGG 57.801 50.000 2.18 0.00 0.00 5.73
3087 3297 4.582701 TTTTGCATATATTTCAGGCCGG 57.417 40.909 0.00 0.00 0.00 6.13
3107 3317 1.620323 GTTGCTCTGCTCCCCATTTTT 59.380 47.619 0.00 0.00 0.00 1.94
3108 3318 1.203100 AGTTGCTCTGCTCCCCATTTT 60.203 47.619 0.00 0.00 0.00 1.82
3109 3319 0.407139 AGTTGCTCTGCTCCCCATTT 59.593 50.000 0.00 0.00 0.00 2.32
3110 3320 1.065126 GTAGTTGCTCTGCTCCCCATT 60.065 52.381 0.00 0.00 0.00 3.16
3111 3321 0.543749 GTAGTTGCTCTGCTCCCCAT 59.456 55.000 0.00 0.00 0.00 4.00
3112 3322 0.545309 AGTAGTTGCTCTGCTCCCCA 60.545 55.000 0.00 0.00 34.04 4.96
3113 3323 0.615850 AAGTAGTTGCTCTGCTCCCC 59.384 55.000 1.56 0.00 38.12 4.81
3114 3324 2.481289 AAAGTAGTTGCTCTGCTCCC 57.519 50.000 1.56 0.00 38.12 4.30
3134 3344 9.912634 ATAGATTGAAAATTTCTCTCGCAAAAA 57.087 25.926 7.29 0.00 0.00 1.94
3135 3345 9.912634 AATAGATTGAAAATTTCTCTCGCAAAA 57.087 25.926 7.29 0.00 0.00 2.44
3136 3346 9.559958 GAATAGATTGAAAATTTCTCTCGCAAA 57.440 29.630 7.29 0.00 0.00 3.68
3137 3347 8.729756 TGAATAGATTGAAAATTTCTCTCGCAA 58.270 29.630 7.29 0.00 0.00 4.85
3138 3348 8.267620 TGAATAGATTGAAAATTTCTCTCGCA 57.732 30.769 7.29 0.46 0.00 5.10
3139 3349 9.379811 GATGAATAGATTGAAAATTTCTCTCGC 57.620 33.333 7.29 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.