Multiple sequence alignment - TraesCS2D01G013400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G013400 chr2D 100.000 8106 0 0 1 8106 6643101 6634996 0.000000e+00 14970.0
1 TraesCS2D01G013400 chr2D 91.950 323 22 2 6195 6514 6529047 6528726 4.460000e-122 449.0
2 TraesCS2D01G013400 chr2B 96.088 6825 156 42 877 7630 3399859 3406643 0.000000e+00 11021.0
3 TraesCS2D01G013400 chr2B 96.438 3565 93 12 3095 6634 1268307 1271862 0.000000e+00 5849.0
4 TraesCS2D01G013400 chr2B 96.756 1449 23 7 877 2315 1266850 1268284 0.000000e+00 2394.0
5 TraesCS2D01G013400 chr2B 91.832 1408 56 17 6300 7678 3656265 3657642 0.000000e+00 1908.0
6 TraesCS2D01G013400 chr2B 91.149 1062 49 21 6659 7678 1305783 1306841 0.000000e+00 1399.0
7 TraesCS2D01G013400 chr2B 90.383 1071 49 22 6659 7678 3689490 3688423 0.000000e+00 1362.0
8 TraesCS2D01G013400 chr2B 86.747 1245 127 22 2685 3909 3460614 3461840 0.000000e+00 1351.0
9 TraesCS2D01G013400 chr2B 91.266 916 50 11 6741 7631 3654516 3655426 0.000000e+00 1221.0
10 TraesCS2D01G013400 chr2B 84.682 1038 98 37 5000 6010 3470816 3471819 0.000000e+00 979.0
11 TraesCS2D01G013400 chr2B 94.290 648 17 11 98 745 3399250 3399877 0.000000e+00 974.0
12 TraesCS2D01G013400 chr2B 88.369 791 58 13 6867 7630 3472890 3473673 0.000000e+00 920.0
13 TraesCS2D01G013400 chr2B 88.717 709 40 16 6659 7343 1272047 1272739 0.000000e+00 830.0
14 TraesCS2D01G013400 chr2B 90.458 524 32 5 6659 7165 3424506 3423984 0.000000e+00 675.0
15 TraesCS2D01G013400 chr2B 86.175 651 47 16 3903 4517 3462330 3462973 0.000000e+00 664.0
16 TraesCS2D01G013400 chr2B 96.399 361 12 1 348 708 1266389 1266748 1.950000e-165 593.0
17 TraesCS2D01G013400 chr2B 90.855 339 22 5 6197 6528 3472502 3472838 5.770000e-121 446.0
18 TraesCS2D01G013400 chr2B 89.655 319 32 1 7789 8106 43136686 43136368 9.800000e-109 405.0
19 TraesCS2D01G013400 chr2B 89.342 319 33 1 7789 8106 43119587 43119269 4.560000e-107 399.0
20 TraesCS2D01G013400 chr2B 88.179 313 37 0 7791 8103 378058629 378058941 2.760000e-99 374.0
21 TraesCS2D01G013400 chr2B 92.568 148 11 0 4793 4940 3470662 3470809 6.370000e-51 213.0
22 TraesCS2D01G013400 chr2B 82.264 265 22 9 4569 4811 3463088 3463349 1.070000e-48 206.0
23 TraesCS2D01G013400 chr2B 78.859 298 23 10 7224 7494 1175150 1174866 1.810000e-36 165.0
24 TraesCS2D01G013400 chr2B 87.838 148 8 5 7343 7488 1264468 1264607 1.810000e-36 165.0
25 TraesCS2D01G013400 chr2B 87.805 123 11 3 6085 6204 3472273 3472394 3.050000e-29 141.0
26 TraesCS2D01G013400 chr2B 93.846 65 4 0 1 65 3399185 3399249 1.860000e-16 99.0
27 TraesCS2D01G013400 chr2B 100.000 39 0 0 707 745 1266830 1266868 1.130000e-08 73.1
28 TraesCS2D01G013400 chr2A 95.728 5758 186 30 881 6604 4956477 4950746 0.000000e+00 9215.0
29 TraesCS2D01G013400 chr2A 93.248 1170 36 14 6659 7791 4950409 4949246 0.000000e+00 1683.0
30 TraesCS2D01G013400 chr2A 90.957 752 46 11 1 745 4957198 4956462 0.000000e+00 992.0
31 TraesCS2D01G013400 chr2A 97.386 153 2 2 740 891 605168129 605168280 8.070000e-65 259.0
32 TraesCS2D01G013400 chr2A 87.013 154 10 5 7343 7494 4941059 4940914 1.810000e-36 165.0
33 TraesCS2D01G013400 chr2A 90.000 80 6 1 7714 7791 762648347 762648268 1.440000e-17 102.0
34 TraesCS2D01G013400 chrUn 85.163 1530 115 53 4555 6019 16167582 16166100 0.000000e+00 1465.0
35 TraesCS2D01G013400 chrUn 92.083 480 31 6 6865 7343 313256319 313256792 0.000000e+00 669.0
36 TraesCS2D01G013400 chrUn 94.236 399 10 5 6306 6704 480580615 480581000 1.510000e-166 597.0
37 TraesCS2D01G013400 chrUn 90.200 449 31 6 6197 6634 313255528 313255974 2.540000e-159 573.0
38 TraesCS2D01G013400 chrUn 89.076 119 10 2 6085 6201 313255300 313255417 2.360000e-30 145.0
39 TraesCS2D01G013400 chr3B 94.304 316 14 1 7791 8106 815975813 815976124 1.580000e-131 481.0
40 TraesCS2D01G013400 chr3B 94.479 163 8 1 740 901 511505965 511505803 4.860000e-62 250.0
41 TraesCS2D01G013400 chr7D 91.950 323 26 0 7784 8106 606677921 606677599 3.450000e-123 453.0
42 TraesCS2D01G013400 chr7D 87.302 63 6 2 7725 7785 167633955 167634017 4.060000e-08 71.3
43 TraesCS2D01G013400 chr3A 92.138 318 25 0 7789 8106 448306650 448306333 4.460000e-122 449.0
44 TraesCS2D01G013400 chr6D 90.221 317 31 0 7790 8106 25817268 25817584 1.630000e-111 414.0
45 TraesCS2D01G013400 chr6D 94.675 169 5 4 2076 2243 267532969 267532804 8.070000e-65 259.0
46 TraesCS2D01G013400 chr5B 88.924 316 35 0 7791 8106 581217518 581217203 2.740000e-104 390.0
47 TraesCS2D01G013400 chr3D 87.736 318 37 2 7790 8106 68329665 68329981 3.570000e-98 370.0
48 TraesCS2D01G013400 chr3D 98.592 142 2 0 741 882 319743639 319743780 1.350000e-62 252.0
49 TraesCS2D01G013400 chr4A 96.296 162 6 0 740 901 117840727 117840888 4.820000e-67 267.0
50 TraesCS2D01G013400 chr4A 96.226 159 4 2 740 898 621283566 621283410 8.070000e-65 259.0
51 TraesCS2D01G013400 chr7B 96.774 155 3 2 740 893 319239087 319239240 2.900000e-64 257.0
52 TraesCS2D01G013400 chr7B 94.083 169 4 5 2074 2241 511856731 511856894 1.350000e-62 252.0
53 TraesCS2D01G013400 chr7B 89.024 82 5 1 6753 6830 99203862 99203781 1.860000e-16 99.0
54 TraesCS2D01G013400 chr1B 96.753 154 5 0 740 893 511477125 511477278 2.900000e-64 257.0
55 TraesCS2D01G013400 chr1B 98.611 144 2 0 740 883 255507633 255507776 1.040000e-63 255.0
56 TraesCS2D01G013400 chr1B 94.083 169 6 3 2076 2243 39380605 39380770 3.750000e-63 254.0
57 TraesCS2D01G013400 chr1B 87.931 58 4 3 7722 7778 563367638 563367693 1.890000e-06 65.8
58 TraesCS2D01G013400 chr7A 94.152 171 5 4 2074 2243 552975372 552975538 1.040000e-63 255.0
59 TraesCS2D01G013400 chr6A 95.652 161 4 2 2076 2236 381088862 381088705 1.040000e-63 255.0
60 TraesCS2D01G013400 chr6A 91.111 180 11 4 2076 2253 173329315 173329139 1.050000e-58 239.0
61 TraesCS2D01G013400 chr6A 87.387 111 8 2 7683 7791 471163649 471163543 1.100000e-23 122.0
62 TraesCS2D01G013400 chr4B 93.529 170 6 5 717 883 564984919 564985086 1.750000e-61 248.0
63 TraesCS2D01G013400 chr1A 93.976 166 6 3 2076 2240 24135782 24135944 1.750000e-61 248.0
64 TraesCS2D01G013400 chr1D 81.250 112 13 5 7680 7791 328073478 328073375 5.210000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G013400 chr2D 6634996 6643101 8105 True 14970.000000 14970 100.000000 1 8106 1 chr2D.!!$R2 8105
1 TraesCS2D01G013400 chr2B 3399185 3406643 7458 False 4031.333333 11021 94.741333 1 7630 3 chr2B.!!$F4 7629
2 TraesCS2D01G013400 chr2B 1264468 1272739 8271 False 1650.683333 5849 94.358000 348 7488 6 chr2B.!!$F3 7140
3 TraesCS2D01G013400 chr2B 3654516 3657642 3126 False 1564.500000 1908 91.549000 6300 7678 2 chr2B.!!$F7 1378
4 TraesCS2D01G013400 chr2B 1305783 1306841 1058 False 1399.000000 1399 91.149000 6659 7678 1 chr2B.!!$F1 1019
5 TraesCS2D01G013400 chr2B 3688423 3689490 1067 True 1362.000000 1362 90.383000 6659 7678 1 chr2B.!!$R3 1019
6 TraesCS2D01G013400 chr2B 3460614 3463349 2735 False 740.333333 1351 85.062000 2685 4811 3 chr2B.!!$F5 2126
7 TraesCS2D01G013400 chr2B 3423984 3424506 522 True 675.000000 675 90.458000 6659 7165 1 chr2B.!!$R2 506
8 TraesCS2D01G013400 chr2B 3470662 3473673 3011 False 539.800000 979 88.855800 4793 7630 5 chr2B.!!$F6 2837
9 TraesCS2D01G013400 chr2A 4949246 4957198 7952 True 3963.333333 9215 93.311000 1 7791 3 chr2A.!!$R3 7790
10 TraesCS2D01G013400 chrUn 16166100 16167582 1482 True 1465.000000 1465 85.163000 4555 6019 1 chrUn.!!$R1 1464
11 TraesCS2D01G013400 chrUn 313255300 313256792 1492 False 462.333333 669 90.453000 6085 7343 3 chrUn.!!$F2 1258

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
795 2461 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09 F
803 2469 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01 F
804 2470 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16 F
2588 4274 1.073923 ACCAAAATCGGACCAGCTCTT 59.926 47.619 0.00 0.00 0.00 2.85 F
2781 4476 2.613026 TTGGTCTGCTCAAGTCGAAA 57.387 45.000 0.00 0.00 0.00 3.46 F
2882 4578 4.285517 TCTTTTCAAATAGGGCATGGCAAA 59.714 37.500 22.06 8.47 0.00 3.68 F
4418 6667 0.250467 TTGCAGCACTCCTTCAGACC 60.250 55.000 0.00 0.00 0.00 3.85 F
6044 8756 6.086502 GCACTACGTTACGAGCTATTCATTAG 59.913 42.308 13.03 0.98 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2100 3774 2.072487 GCCCCTGTCCATGGCTAGA 61.072 63.158 6.96 0.00 42.01 2.43 R
2151 3825 2.839486 AGATCTCGCAACCAACTCAA 57.161 45.000 0.00 0.00 0.00 3.02 R
2701 4393 3.573538 TGCTGGTAGGTTTACGTAGTGAA 59.426 43.478 0.00 0.00 45.73 3.18 R
4146 6364 1.737793 CGACAAGGTTAAGCATGGTCC 59.262 52.381 13.77 0.00 0.00 4.46 R
4345 6592 6.561519 ACCATCAGCTAGTTAACTTACCAT 57.438 37.500 14.49 0.00 0.00 3.55 R
4621 6958 8.796475 ACAATTCACAACTGCAGTTATAATCTT 58.204 29.630 30.67 16.73 36.32 2.40 R
6156 8941 0.248843 GTCTCTAGCAACTGCAGGCT 59.751 55.000 19.93 19.63 45.16 4.58 R
8016 11360 0.101759 TACGACGGTCAGCTTATGGC 59.898 55.000 9.10 0.00 42.19 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 5.065988 TCTGAACTTTTTCTGTAGTTGTGCC 59.934 40.000 0.00 0.00 34.88 5.01
81 82 3.632145 ACTTTTTCTGTAGTTGTGCCCAG 59.368 43.478 0.00 0.00 0.00 4.45
162 163 3.243724 AGAGGGTGTGCTAAGAGAACTT 58.756 45.455 0.00 0.00 39.81 2.66
348 349 3.504906 GGGTGATCAACGATACCGAGATA 59.495 47.826 4.29 0.00 39.50 1.98
349 350 4.022589 GGGTGATCAACGATACCGAGATAA 60.023 45.833 4.29 0.00 39.50 1.75
350 351 4.916249 GGTGATCAACGATACCGAGATAAC 59.084 45.833 0.00 0.00 39.50 1.89
363 1938 4.219944 ACCGAGATAACTGCTGAAACTACA 59.780 41.667 0.00 0.00 0.00 2.74
366 1941 4.508662 AGATAACTGCTGAAACTACAGGC 58.491 43.478 0.00 0.00 38.22 4.85
486 2061 4.042934 AGGAAAAAGGTGTGTATAGCTGGT 59.957 41.667 0.00 0.00 0.00 4.00
696 2278 5.959618 AATTGTAAGTGCTTTAGTGGGTC 57.040 39.130 0.00 0.00 0.00 4.46
751 2417 8.616076 AGTTTTGACATATTACAATGAGCTAGC 58.384 33.333 6.62 6.62 0.00 3.42
752 2418 8.616076 GTTTTGACATATTACAATGAGCTAGCT 58.384 33.333 19.45 19.45 0.00 3.32
753 2419 9.830975 TTTTGACATATTACAATGAGCTAGCTA 57.169 29.630 19.38 6.79 0.00 3.32
755 2421 8.992835 TGACATATTACAATGAGCTAGCTATG 57.007 34.615 19.38 18.66 0.00 2.23
756 2422 8.037166 TGACATATTACAATGAGCTAGCTATGG 58.963 37.037 19.38 11.48 0.00 2.74
757 2423 8.138928 ACATATTACAATGAGCTAGCTATGGA 57.861 34.615 19.38 11.30 0.00 3.41
758 2424 8.037758 ACATATTACAATGAGCTAGCTATGGAC 58.962 37.037 19.38 5.21 0.00 4.02
759 2425 5.869649 TTACAATGAGCTAGCTATGGACA 57.130 39.130 19.38 11.57 0.00 4.02
760 2426 4.333913 ACAATGAGCTAGCTATGGACAG 57.666 45.455 19.38 6.81 0.00 3.51
761 2427 3.070734 ACAATGAGCTAGCTATGGACAGG 59.929 47.826 19.38 9.78 0.00 4.00
762 2428 1.709578 TGAGCTAGCTATGGACAGGG 58.290 55.000 19.38 0.00 0.00 4.45
763 2429 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
764 2430 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
765 2431 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
766 2432 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
767 2433 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
768 2434 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
769 2435 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
770 2436 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
772 2438 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
773 2439 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
774 2440 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
775 2441 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
776 2442 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
777 2443 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
778 2444 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
779 2445 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
780 2446 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
781 2447 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
782 2448 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
783 2449 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
784 2450 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
785 2451 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
786 2452 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
787 2453 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
788 2454 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
789 2455 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
790 2456 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
791 2457 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
792 2458 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
793 2459 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
794 2460 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
795 2461 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
796 2462 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
797 2463 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
798 2464 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
799 2465 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
800 2466 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
801 2467 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
802 2468 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
803 2469 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
804 2470 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
813 2479 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
814 2480 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
815 2481 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
816 2482 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
817 2483 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
818 2484 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
819 2485 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
820 2486 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
821 2487 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
822 2488 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
823 2489 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
824 2490 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
825 2491 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
826 2492 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
827 2493 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
828 2494 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
829 2495 3.197766 TGCGAGATCTTATGGGTTTCACT 59.802 43.478 0.00 0.00 0.00 3.41
830 2496 4.192317 GCGAGATCTTATGGGTTTCACTT 58.808 43.478 0.00 0.00 0.00 3.16
831 2497 4.271291 GCGAGATCTTATGGGTTTCACTTC 59.729 45.833 0.00 0.00 0.00 3.01
832 2498 5.665459 CGAGATCTTATGGGTTTCACTTCT 58.335 41.667 0.00 0.00 0.00 2.85
833 2499 6.683110 GCGAGATCTTATGGGTTTCACTTCTA 60.683 42.308 0.00 0.00 0.00 2.10
834 2500 6.920758 CGAGATCTTATGGGTTTCACTTCTAG 59.079 42.308 0.00 0.00 0.00 2.43
835 2501 6.587273 AGATCTTATGGGTTTCACTTCTAGC 58.413 40.000 0.00 0.00 0.00 3.42
836 2502 5.099042 TCTTATGGGTTTCACTTCTAGCC 57.901 43.478 0.00 0.00 0.00 3.93
837 2503 4.783227 TCTTATGGGTTTCACTTCTAGCCT 59.217 41.667 0.00 0.00 0.00 4.58
838 2504 5.962031 TCTTATGGGTTTCACTTCTAGCCTA 59.038 40.000 0.00 0.00 0.00 3.93
839 2505 3.975168 TGGGTTTCACTTCTAGCCTAC 57.025 47.619 0.00 0.00 0.00 3.18
840 2506 2.570302 TGGGTTTCACTTCTAGCCTACC 59.430 50.000 0.00 0.00 0.00 3.18
841 2507 2.093075 GGGTTTCACTTCTAGCCTACCC 60.093 54.545 0.00 0.00 37.41 3.69
842 2508 2.093075 GGTTTCACTTCTAGCCTACCCC 60.093 54.545 0.00 0.00 0.00 4.95
843 2509 2.570302 GTTTCACTTCTAGCCTACCCCA 59.430 50.000 0.00 0.00 0.00 4.96
844 2510 2.634639 TCACTTCTAGCCTACCCCAA 57.365 50.000 0.00 0.00 0.00 4.12
845 2511 2.185387 TCACTTCTAGCCTACCCCAAC 58.815 52.381 0.00 0.00 0.00 3.77
846 2512 2.188817 CACTTCTAGCCTACCCCAACT 58.811 52.381 0.00 0.00 0.00 3.16
847 2513 2.572104 CACTTCTAGCCTACCCCAACTT 59.428 50.000 0.00 0.00 0.00 2.66
848 2514 2.572104 ACTTCTAGCCTACCCCAACTTG 59.428 50.000 0.00 0.00 0.00 3.16
849 2515 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
850 2516 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
851 2517 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
852 2518 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
863 2529 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
864 2530 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
865 2531 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
866 2532 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
867 2533 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
868 2534 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
869 2535 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
870 2536 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
871 2537 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
872 2538 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
873 2539 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
874 2540 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
875 2541 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
876 2542 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
877 2543 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
878 2544 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
879 2545 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
1799 3471 4.556942 TGACTGAAACACAAAGCTCATG 57.443 40.909 0.00 0.00 0.00 3.07
1968 3642 4.907879 GGATTGAATTCTCCCACATGAC 57.092 45.455 7.05 0.00 0.00 3.06
2100 3774 6.735556 AGGACTGGAATATCACCAAAGAAAT 58.264 36.000 3.72 0.00 36.95 2.17
2151 3825 1.133976 GCTATCCATGTGCCAGAACCT 60.134 52.381 0.00 0.00 0.00 3.50
2262 3945 9.195411 GTTGTTGAGATTAATTTCATTGCAGAA 57.805 29.630 9.31 0.00 0.00 3.02
2544 4230 4.020307 TGAATGAACTGCACCTCATGACTA 60.020 41.667 6.55 0.00 32.60 2.59
2545 4231 4.558226 ATGAACTGCACCTCATGACTAA 57.442 40.909 5.21 0.00 31.04 2.24
2588 4274 1.073923 ACCAAAATCGGACCAGCTCTT 59.926 47.619 0.00 0.00 0.00 2.85
2635 4327 5.891551 ACAATAAACACTCACCCAGTTTCTT 59.108 36.000 0.00 0.00 36.85 2.52
2701 4393 8.410912 GGTGAGTTAACATTTAAAACCTTGACT 58.589 33.333 8.61 0.00 0.00 3.41
2753 4448 7.122650 TGAAATCATCCTAAAAACCAGATCCAC 59.877 37.037 0.00 0.00 0.00 4.02
2781 4476 2.613026 TTGGTCTGCTCAAGTCGAAA 57.387 45.000 0.00 0.00 0.00 3.46
2864 4560 5.074515 TGGAGTATGGACCTTTTCCTCTTTT 59.925 40.000 10.24 0.00 46.10 2.27
2882 4578 4.285517 TCTTTTCAAATAGGGCATGGCAAA 59.714 37.500 22.06 8.47 0.00 3.68
3048 4750 4.995124 ACGCGTCCATATATTATGAGGTC 58.005 43.478 5.58 0.00 0.00 3.85
3049 4751 4.705507 ACGCGTCCATATATTATGAGGTCT 59.294 41.667 5.58 0.00 0.00 3.85
3050 4752 5.037385 CGCGTCCATATATTATGAGGTCTG 58.963 45.833 0.00 0.00 0.00 3.51
3475 5190 7.201393 CGAGTGACTAATGTGAAGCTTTTCTAG 60.201 40.741 0.00 0.82 0.00 2.43
3529 5244 8.079809 ACAAAAATCGGTACTTGTGGAAATTAG 58.920 33.333 0.00 0.00 31.00 1.73
4345 6592 9.733556 TTTGCTAGTATTTAGAAGAATTGGACA 57.266 29.630 0.00 0.00 0.00 4.02
4418 6667 0.250467 TTGCAGCACTCCTTCAGACC 60.250 55.000 0.00 0.00 0.00 3.85
4505 6764 9.884636 TTTACTACAAGCTAGCAGATTGAAATA 57.115 29.630 18.83 5.48 43.78 1.40
4621 6958 6.222038 AGGAGCTTCTATAATTCGTGTTCA 57.778 37.500 0.00 0.00 0.00 3.18
6044 8756 6.086502 GCACTACGTTACGAGCTATTCATTAG 59.913 42.308 13.03 0.98 0.00 1.73
6096 8880 9.760660 CTTGATGCAACTACAGTATTACTTTTC 57.239 33.333 0.00 0.00 0.00 2.29
6125 8910 7.715686 AGCCAATTATTGTTAGGTAGAGTTAGC 59.284 37.037 4.15 0.00 0.00 3.09
6177 8964 1.406614 GCCTGCAGTTGCTAGAGACAT 60.407 52.381 13.81 0.00 42.66 3.06
6183 8970 4.453478 TGCAGTTGCTAGAGACATCTTTTG 59.547 41.667 5.62 0.00 42.66 2.44
6186 8973 6.597614 CAGTTGCTAGAGACATCTTTTGTTC 58.402 40.000 0.00 0.00 39.18 3.18
6652 9736 5.970501 ATTACTCCCTCCGTTCCTAATTT 57.029 39.130 0.00 0.00 0.00 1.82
6654 9904 2.167900 ACTCCCTCCGTTCCTAATTTCG 59.832 50.000 0.00 0.00 0.00 3.46
6860 10139 9.847224 TCCCTGATTCAGAACTTATTTATAACC 57.153 33.333 15.36 0.00 32.44 2.85
7310 10617 7.766738 TGTGTTGTGTAAAGAGTATTTGTCTGA 59.233 33.333 0.00 0.00 0.00 3.27
7668 11012 7.208080 ACTTGTACGAAAAGACAACTCTATGT 58.792 34.615 0.00 0.00 35.90 2.29
7686 11030 2.492025 TGTCTATTCATTGGGAGGGCT 58.508 47.619 0.00 0.00 0.00 5.19
7696 11040 1.979155 GGGAGGGCTGTTTTGGCTC 60.979 63.158 0.00 0.00 0.00 4.70
7701 11045 2.278330 GGCTGTTTTGGCTCTGGGG 61.278 63.158 0.00 0.00 0.00 4.96
7702 11046 1.531602 GCTGTTTTGGCTCTGGGGT 60.532 57.895 0.00 0.00 0.00 4.95
7703 11047 1.809567 GCTGTTTTGGCTCTGGGGTG 61.810 60.000 0.00 0.00 0.00 4.61
7704 11048 1.809567 CTGTTTTGGCTCTGGGGTGC 61.810 60.000 0.00 0.00 0.00 5.01
7705 11049 1.832167 GTTTTGGCTCTGGGGTGCA 60.832 57.895 0.00 0.00 34.07 4.57
7706 11050 1.155859 TTTTGGCTCTGGGGTGCAT 59.844 52.632 0.00 0.00 34.07 3.96
7707 11051 0.407528 TTTTGGCTCTGGGGTGCATA 59.592 50.000 0.00 0.00 34.07 3.14
7708 11052 0.630673 TTTGGCTCTGGGGTGCATAT 59.369 50.000 0.00 0.00 34.07 1.78
7811 11155 1.964552 TTTTTGCGACGGTAAAGGGA 58.035 45.000 0.00 0.00 0.00 4.20
7812 11156 1.515081 TTTTGCGACGGTAAAGGGAG 58.485 50.000 0.00 0.00 0.00 4.30
7813 11157 0.393820 TTTGCGACGGTAAAGGGAGT 59.606 50.000 0.00 0.00 0.00 3.85
7814 11158 0.393820 TTGCGACGGTAAAGGGAGTT 59.606 50.000 0.00 0.00 0.00 3.01
7815 11159 0.393820 TGCGACGGTAAAGGGAGTTT 59.606 50.000 0.00 0.00 0.00 2.66
7816 11160 0.794473 GCGACGGTAAAGGGAGTTTG 59.206 55.000 0.00 0.00 0.00 2.93
7817 11161 1.606224 GCGACGGTAAAGGGAGTTTGA 60.606 52.381 0.00 0.00 0.00 2.69
7818 11162 2.933928 GCGACGGTAAAGGGAGTTTGAT 60.934 50.000 0.00 0.00 0.00 2.57
7819 11163 3.332034 CGACGGTAAAGGGAGTTTGATT 58.668 45.455 0.00 0.00 0.00 2.57
7820 11164 3.124636 CGACGGTAAAGGGAGTTTGATTG 59.875 47.826 0.00 0.00 0.00 2.67
7821 11165 2.817844 ACGGTAAAGGGAGTTTGATTGC 59.182 45.455 0.00 0.00 0.00 3.56
7822 11166 2.817258 CGGTAAAGGGAGTTTGATTGCA 59.183 45.455 0.00 0.00 0.00 4.08
7823 11167 3.254657 CGGTAAAGGGAGTTTGATTGCAA 59.745 43.478 0.00 0.00 0.00 4.08
7824 11168 4.261825 CGGTAAAGGGAGTTTGATTGCAAA 60.262 41.667 1.71 0.00 41.47 3.68
7825 11169 5.230182 GGTAAAGGGAGTTTGATTGCAAAG 58.770 41.667 1.71 0.00 44.12 2.77
7827 11171 5.357742 AAAGGGAGTTTGATTGCAAAGTT 57.642 34.783 1.71 0.00 45.25 2.66
7828 11172 6.478512 AAAGGGAGTTTGATTGCAAAGTTA 57.521 33.333 1.71 0.00 45.25 2.24
7829 11173 6.670695 AAGGGAGTTTGATTGCAAAGTTAT 57.329 33.333 1.71 0.00 45.25 1.89
7830 11174 7.775053 AAGGGAGTTTGATTGCAAAGTTATA 57.225 32.000 1.71 0.00 45.25 0.98
7831 11175 7.396540 AGGGAGTTTGATTGCAAAGTTATAG 57.603 36.000 1.71 0.00 45.25 1.31
7832 11176 7.175104 AGGGAGTTTGATTGCAAAGTTATAGA 58.825 34.615 1.71 0.00 45.25 1.98
7833 11177 7.337942 AGGGAGTTTGATTGCAAAGTTATAGAG 59.662 37.037 1.71 0.00 45.25 2.43
7834 11178 7.121315 GGGAGTTTGATTGCAAAGTTATAGAGT 59.879 37.037 1.71 0.00 45.25 3.24
7835 11179 8.515414 GGAGTTTGATTGCAAAGTTATAGAGTT 58.485 33.333 1.71 0.00 45.25 3.01
7840 11184 9.502091 TTGATTGCAAAGTTATAGAGTTACAGT 57.498 29.630 1.71 0.00 0.00 3.55
7841 11185 9.151471 TGATTGCAAAGTTATAGAGTTACAGTC 57.849 33.333 1.71 0.00 0.00 3.51
7842 11186 7.576750 TTGCAAAGTTATAGAGTTACAGTCG 57.423 36.000 0.00 0.00 0.00 4.18
7843 11187 6.916440 TGCAAAGTTATAGAGTTACAGTCGA 58.084 36.000 0.00 0.00 0.00 4.20
7844 11188 7.027760 TGCAAAGTTATAGAGTTACAGTCGAG 58.972 38.462 0.00 0.00 0.00 4.04
7845 11189 7.094506 TGCAAAGTTATAGAGTTACAGTCGAGA 60.095 37.037 0.00 0.00 0.00 4.04
7846 11190 7.429920 GCAAAGTTATAGAGTTACAGTCGAGAG 59.570 40.741 0.00 0.00 0.00 3.20
7847 11191 7.556733 AAGTTATAGAGTTACAGTCGAGAGG 57.443 40.000 0.00 0.00 0.00 3.69
7848 11192 5.528320 AGTTATAGAGTTACAGTCGAGAGGC 59.472 44.000 0.00 0.00 0.00 4.70
7849 11193 1.465794 AGAGTTACAGTCGAGAGGCC 58.534 55.000 0.00 0.00 35.23 5.19
7850 11194 1.174783 GAGTTACAGTCGAGAGGCCA 58.825 55.000 5.01 0.00 35.23 5.36
7851 11195 0.889306 AGTTACAGTCGAGAGGCCAC 59.111 55.000 5.01 0.00 35.23 5.01
7852 11196 0.601558 GTTACAGTCGAGAGGCCACA 59.398 55.000 5.01 0.00 35.23 4.17
7853 11197 1.000506 GTTACAGTCGAGAGGCCACAA 59.999 52.381 5.01 0.00 35.23 3.33
7854 11198 1.334160 TACAGTCGAGAGGCCACAAA 58.666 50.000 5.01 0.00 35.23 2.83
7855 11199 0.687354 ACAGTCGAGAGGCCACAAAT 59.313 50.000 5.01 0.00 35.23 2.32
7856 11200 1.338200 ACAGTCGAGAGGCCACAAATC 60.338 52.381 5.01 0.00 35.23 2.17
7857 11201 0.250513 AGTCGAGAGGCCACAAATCC 59.749 55.000 5.01 0.00 35.23 3.01
7858 11202 0.250513 GTCGAGAGGCCACAAATCCT 59.749 55.000 5.01 0.00 34.90 3.24
7859 11203 0.984230 TCGAGAGGCCACAAATCCTT 59.016 50.000 5.01 0.00 31.71 3.36
7860 11204 1.089920 CGAGAGGCCACAAATCCTTG 58.910 55.000 5.01 0.00 38.61 3.61
7861 11205 1.339055 CGAGAGGCCACAAATCCTTGA 60.339 52.381 5.01 0.00 36.33 3.02
7862 11206 2.681976 CGAGAGGCCACAAATCCTTGAT 60.682 50.000 5.01 0.00 36.33 2.57
7863 11207 3.432186 CGAGAGGCCACAAATCCTTGATA 60.432 47.826 5.01 0.00 36.33 2.15
7864 11208 3.879892 GAGAGGCCACAAATCCTTGATAC 59.120 47.826 5.01 0.00 36.33 2.24
7865 11209 3.266772 AGAGGCCACAAATCCTTGATACA 59.733 43.478 5.01 0.00 36.33 2.29
7866 11210 4.016444 GAGGCCACAAATCCTTGATACAA 58.984 43.478 5.01 0.00 36.33 2.41
7867 11211 4.019174 AGGCCACAAATCCTTGATACAAG 58.981 43.478 5.01 4.73 36.33 3.16
7868 11212 3.131046 GGCCACAAATCCTTGATACAAGG 59.869 47.826 20.43 20.43 38.78 3.61
7869 11213 3.763897 GCCACAAATCCTTGATACAAGGT 59.236 43.478 23.82 12.66 38.55 3.50
7870 11214 4.380867 GCCACAAATCCTTGATACAAGGTG 60.381 45.833 23.82 18.62 38.55 4.00
7871 11215 4.158394 CCACAAATCCTTGATACAAGGTGG 59.842 45.833 23.82 20.04 38.55 4.61
7872 11216 5.009631 CACAAATCCTTGATACAAGGTGGA 58.990 41.667 23.82 10.67 38.55 4.02
7873 11217 5.476599 CACAAATCCTTGATACAAGGTGGAA 59.523 40.000 23.82 10.19 38.55 3.53
7874 11218 5.476945 ACAAATCCTTGATACAAGGTGGAAC 59.523 40.000 23.82 0.00 38.55 3.62
7875 11219 5.520748 AATCCTTGATACAAGGTGGAACT 57.479 39.130 23.82 6.67 38.55 3.01
7876 11220 4.286297 TCCTTGATACAAGGTGGAACTG 57.714 45.455 23.82 3.14 38.55 3.16
7877 11221 3.907474 TCCTTGATACAAGGTGGAACTGA 59.093 43.478 23.82 5.59 38.55 3.41
7878 11222 4.349636 TCCTTGATACAAGGTGGAACTGAA 59.650 41.667 23.82 5.01 38.55 3.02
7879 11223 5.014123 TCCTTGATACAAGGTGGAACTGAAT 59.986 40.000 23.82 0.00 38.55 2.57
7880 11224 5.124457 CCTTGATACAAGGTGGAACTGAATG 59.876 44.000 18.81 0.00 36.74 2.67
7881 11225 5.497464 TGATACAAGGTGGAACTGAATGA 57.503 39.130 0.00 0.00 36.74 2.57
7882 11226 5.875224 TGATACAAGGTGGAACTGAATGAA 58.125 37.500 0.00 0.00 36.74 2.57
7883 11227 5.939883 TGATACAAGGTGGAACTGAATGAAG 59.060 40.000 0.00 0.00 36.74 3.02
7884 11228 2.887152 ACAAGGTGGAACTGAATGAAGC 59.113 45.455 0.00 0.00 36.74 3.86
7885 11229 2.206576 AGGTGGAACTGAATGAAGCC 57.793 50.000 0.00 0.00 36.74 4.35
7886 11230 1.425066 AGGTGGAACTGAATGAAGCCA 59.575 47.619 0.00 0.00 36.74 4.75
7887 11231 2.158475 AGGTGGAACTGAATGAAGCCAA 60.158 45.455 0.00 0.00 36.74 4.52
7888 11232 2.627699 GGTGGAACTGAATGAAGCCAAA 59.372 45.455 0.00 0.00 36.74 3.28
7889 11233 3.259123 GGTGGAACTGAATGAAGCCAAAT 59.741 43.478 0.00 0.00 36.74 2.32
7890 11234 4.462483 GGTGGAACTGAATGAAGCCAAATA 59.538 41.667 0.00 0.00 36.74 1.40
7891 11235 5.393461 GGTGGAACTGAATGAAGCCAAATAG 60.393 44.000 0.00 0.00 36.74 1.73
7892 11236 4.158394 TGGAACTGAATGAAGCCAAATAGC 59.842 41.667 0.00 0.00 0.00 2.97
7893 11237 4.158394 GGAACTGAATGAAGCCAAATAGCA 59.842 41.667 0.00 0.00 34.23 3.49
7894 11238 4.978083 ACTGAATGAAGCCAAATAGCAG 57.022 40.909 0.00 0.00 34.23 4.24
7895 11239 4.338879 ACTGAATGAAGCCAAATAGCAGT 58.661 39.130 0.00 0.00 34.23 4.40
7896 11240 4.768968 ACTGAATGAAGCCAAATAGCAGTT 59.231 37.500 0.00 0.00 30.66 3.16
7897 11241 5.063180 TGAATGAAGCCAAATAGCAGTTG 57.937 39.130 0.00 0.00 34.23 3.16
7898 11242 3.515330 ATGAAGCCAAATAGCAGTTGC 57.485 42.857 0.00 0.00 42.49 4.17
7908 11252 2.126071 GCAGTTGCTCGCTCCGTA 60.126 61.111 0.00 0.00 38.21 4.02
7909 11253 2.445438 GCAGTTGCTCGCTCCGTAC 61.445 63.158 0.00 0.00 38.21 3.67
7910 11254 2.152699 CAGTTGCTCGCTCCGTACG 61.153 63.158 8.69 8.69 0.00 3.67
7911 11255 2.879462 GTTGCTCGCTCCGTACGG 60.879 66.667 28.66 28.66 0.00 4.02
7912 11256 4.789075 TTGCTCGCTCCGTACGGC 62.789 66.667 29.64 17.44 34.68 5.68
7915 11259 3.812019 CTCGCTCCGTACGGCTGT 61.812 66.667 29.64 2.42 34.68 4.40
7916 11260 2.436469 TCGCTCCGTACGGCTGTA 60.436 61.111 29.64 11.45 34.68 2.74
7917 11261 1.985447 CTCGCTCCGTACGGCTGTAA 61.985 60.000 29.64 11.05 34.68 2.41
7918 11262 1.870901 CGCTCCGTACGGCTGTAAC 60.871 63.158 29.64 12.75 34.68 2.50
7919 11263 1.213537 GCTCCGTACGGCTGTAACA 59.786 57.895 29.64 9.48 34.68 2.41
7920 11264 0.388907 GCTCCGTACGGCTGTAACAA 60.389 55.000 29.64 8.69 34.68 2.83
7921 11265 1.625616 CTCCGTACGGCTGTAACAAG 58.374 55.000 29.64 14.78 34.68 3.16
7922 11266 0.388907 TCCGTACGGCTGTAACAAGC 60.389 55.000 29.64 0.00 42.75 4.01
7930 11274 2.989422 GCTGTAACAAGCCAAACGAT 57.011 45.000 0.00 0.00 37.20 3.73
7931 11275 2.851534 GCTGTAACAAGCCAAACGATC 58.148 47.619 0.00 0.00 37.20 3.69
7932 11276 2.724839 GCTGTAACAAGCCAAACGATCG 60.725 50.000 14.88 14.88 37.20 3.69
7933 11277 1.801771 TGTAACAAGCCAAACGATCGG 59.198 47.619 20.98 2.04 0.00 4.18
7939 11283 3.093278 CCAAACGATCGGCAGCTC 58.907 61.111 20.98 0.00 0.00 4.09
7940 11284 1.448540 CCAAACGATCGGCAGCTCT 60.449 57.895 20.98 0.00 0.00 4.09
7941 11285 0.179111 CCAAACGATCGGCAGCTCTA 60.179 55.000 20.98 0.00 0.00 2.43
7942 11286 1.539065 CCAAACGATCGGCAGCTCTAT 60.539 52.381 20.98 0.00 0.00 1.98
7943 11287 2.205074 CAAACGATCGGCAGCTCTATT 58.795 47.619 20.98 0.00 0.00 1.73
7944 11288 2.141535 AACGATCGGCAGCTCTATTC 57.858 50.000 20.98 0.00 0.00 1.75
7945 11289 1.323412 ACGATCGGCAGCTCTATTCT 58.677 50.000 20.98 0.00 0.00 2.40
7946 11290 1.000827 ACGATCGGCAGCTCTATTCTG 60.001 52.381 20.98 0.00 34.79 3.02
7947 11291 1.000827 CGATCGGCAGCTCTATTCTGT 60.001 52.381 7.38 0.00 34.21 3.41
7948 11292 2.226674 CGATCGGCAGCTCTATTCTGTA 59.773 50.000 7.38 0.00 34.21 2.74
7949 11293 3.669290 CGATCGGCAGCTCTATTCTGTAG 60.669 52.174 7.38 0.00 34.21 2.74
7950 11294 2.932261 TCGGCAGCTCTATTCTGTAGA 58.068 47.619 0.00 0.00 34.21 2.59
7951 11295 2.619177 TCGGCAGCTCTATTCTGTAGAC 59.381 50.000 0.00 0.00 34.21 2.59
7952 11296 2.603412 CGGCAGCTCTATTCTGTAGACG 60.603 54.545 0.00 0.00 34.21 4.18
7953 11297 2.619177 GGCAGCTCTATTCTGTAGACGA 59.381 50.000 0.00 0.00 34.21 4.20
7954 11298 3.549221 GGCAGCTCTATTCTGTAGACGAC 60.549 52.174 0.00 0.00 34.21 4.34
7955 11299 3.314080 GCAGCTCTATTCTGTAGACGACT 59.686 47.826 0.00 0.00 34.21 4.18
7956 11300 4.512198 GCAGCTCTATTCTGTAGACGACTA 59.488 45.833 0.00 0.00 34.21 2.59
7957 11301 5.007823 GCAGCTCTATTCTGTAGACGACTAA 59.992 44.000 0.00 0.00 34.21 2.24
7958 11302 6.293735 GCAGCTCTATTCTGTAGACGACTAAT 60.294 42.308 0.00 0.00 34.21 1.73
7959 11303 7.295201 CAGCTCTATTCTGTAGACGACTAATC 58.705 42.308 0.00 0.00 0.00 1.75
7960 11304 7.172532 CAGCTCTATTCTGTAGACGACTAATCT 59.827 40.741 0.00 0.00 0.00 2.40
7961 11305 7.717875 AGCTCTATTCTGTAGACGACTAATCTT 59.282 37.037 0.00 0.00 0.00 2.40
7962 11306 8.013378 GCTCTATTCTGTAGACGACTAATCTTC 58.987 40.741 0.00 0.00 0.00 2.87
7963 11307 9.268268 CTCTATTCTGTAGACGACTAATCTTCT 57.732 37.037 0.00 0.00 37.27 2.85
7964 11308 9.047371 TCTATTCTGTAGACGACTAATCTTCTG 57.953 37.037 0.00 0.00 34.48 3.02
7965 11309 7.867305 ATTCTGTAGACGACTAATCTTCTGA 57.133 36.000 0.00 0.00 34.48 3.27
7966 11310 6.912203 TCTGTAGACGACTAATCTTCTGAG 57.088 41.667 0.00 0.00 34.48 3.35
7967 11311 5.818336 TCTGTAGACGACTAATCTTCTGAGG 59.182 44.000 0.00 0.00 34.48 3.86
7968 11312 5.498393 TGTAGACGACTAATCTTCTGAGGT 58.502 41.667 0.00 0.00 34.48 3.85
7969 11313 6.647229 TGTAGACGACTAATCTTCTGAGGTA 58.353 40.000 0.00 0.00 34.48 3.08
7970 11314 6.538021 TGTAGACGACTAATCTTCTGAGGTAC 59.462 42.308 0.00 0.00 34.48 3.34
7971 11315 5.498393 AGACGACTAATCTTCTGAGGTACA 58.502 41.667 0.00 0.00 32.42 2.90
7972 11316 5.944599 AGACGACTAATCTTCTGAGGTACAA 59.055 40.000 0.00 0.00 32.42 2.41
7973 11317 6.433404 AGACGACTAATCTTCTGAGGTACAAA 59.567 38.462 0.00 0.00 32.42 2.83
7974 11318 6.388278 ACGACTAATCTTCTGAGGTACAAAC 58.612 40.000 0.00 0.00 0.00 2.93
7975 11319 6.208994 ACGACTAATCTTCTGAGGTACAAACT 59.791 38.462 0.00 0.00 0.00 2.66
7976 11320 6.748198 CGACTAATCTTCTGAGGTACAAACTC 59.252 42.308 0.00 0.00 35.55 3.01
7977 11321 6.937392 ACTAATCTTCTGAGGTACAAACTCC 58.063 40.000 0.00 0.00 34.06 3.85
7978 11322 4.828072 ATCTTCTGAGGTACAAACTCCC 57.172 45.455 0.00 0.00 34.06 4.30
7979 11323 3.858135 TCTTCTGAGGTACAAACTCCCT 58.142 45.455 0.00 0.00 34.06 4.20
7980 11324 5.006896 TCTTCTGAGGTACAAACTCCCTA 57.993 43.478 0.00 0.00 34.06 3.53
7981 11325 4.771054 TCTTCTGAGGTACAAACTCCCTAC 59.229 45.833 0.00 0.00 34.06 3.18
7982 11326 4.399483 TCTGAGGTACAAACTCCCTACT 57.601 45.455 0.00 0.00 34.06 2.57
7983 11327 5.525454 TCTGAGGTACAAACTCCCTACTA 57.475 43.478 0.00 0.00 34.06 1.82
7984 11328 5.259632 TCTGAGGTACAAACTCCCTACTAC 58.740 45.833 0.00 0.00 34.06 2.73
7985 11329 5.014966 TCTGAGGTACAAACTCCCTACTACT 59.985 44.000 0.00 0.00 34.06 2.57
7986 11330 6.216251 TCTGAGGTACAAACTCCCTACTACTA 59.784 42.308 0.00 0.00 34.06 1.82
7987 11331 6.421485 TGAGGTACAAACTCCCTACTACTAG 58.579 44.000 0.00 0.00 34.06 2.57
7988 11332 5.199723 AGGTACAAACTCCCTACTACTAGC 58.800 45.833 0.00 0.00 0.00 3.42
7989 11333 5.044254 AGGTACAAACTCCCTACTACTAGCT 60.044 44.000 0.00 0.00 0.00 3.32
7990 11334 6.159398 AGGTACAAACTCCCTACTACTAGCTA 59.841 42.308 0.00 0.00 0.00 3.32
7991 11335 6.830838 GGTACAAACTCCCTACTACTAGCTAA 59.169 42.308 0.00 0.00 0.00 3.09
7992 11336 7.340487 GGTACAAACTCCCTACTACTAGCTAAA 59.660 40.741 0.00 0.00 0.00 1.85
7993 11337 7.974730 ACAAACTCCCTACTACTAGCTAAAT 57.025 36.000 0.00 0.00 0.00 1.40
7995 11339 8.911965 ACAAACTCCCTACTACTAGCTAAATAC 58.088 37.037 0.00 0.00 0.00 1.89
7996 11340 9.134055 CAAACTCCCTACTACTAGCTAAATACT 57.866 37.037 0.00 0.00 0.00 2.12
7997 11341 9.712250 AAACTCCCTACTACTAGCTAAATACTT 57.288 33.333 0.00 0.00 0.00 2.24
8009 11353 9.027202 ACTAGCTAAATACTTAATCTCTAGGGC 57.973 37.037 0.00 0.00 0.00 5.19
8010 11354 9.250246 CTAGCTAAATACTTAATCTCTAGGGCT 57.750 37.037 0.00 0.00 0.00 5.19
8012 11356 9.603189 AGCTAAATACTTAATCTCTAGGGCTAA 57.397 33.333 0.00 0.00 0.00 3.09
8013 11357 9.642327 GCTAAATACTTAATCTCTAGGGCTAAC 57.358 37.037 0.00 0.00 0.00 2.34
8016 11360 7.784470 ATACTTAATCTCTAGGGCTAACTGG 57.216 40.000 0.00 0.00 0.00 4.00
8017 11361 4.345547 ACTTAATCTCTAGGGCTAACTGGC 59.654 45.833 0.00 0.00 40.96 4.85
8027 11371 2.332063 GCTAACTGGCCATAAGCTGA 57.668 50.000 20.99 0.00 43.05 4.26
8028 11372 1.943340 GCTAACTGGCCATAAGCTGAC 59.057 52.381 20.99 0.00 43.05 3.51
8029 11373 2.565841 CTAACTGGCCATAAGCTGACC 58.434 52.381 5.51 0.00 43.05 4.02
8030 11374 0.392998 AACTGGCCATAAGCTGACCG 60.393 55.000 5.51 0.00 43.05 4.79
8031 11375 1.221840 CTGGCCATAAGCTGACCGT 59.778 57.895 5.51 0.00 43.05 4.83
8032 11376 0.811616 CTGGCCATAAGCTGACCGTC 60.812 60.000 5.51 0.00 43.05 4.79
8033 11377 1.883084 GGCCATAAGCTGACCGTCG 60.883 63.158 0.00 0.00 43.05 5.12
8034 11378 1.153628 GCCATAAGCTGACCGTCGT 60.154 57.895 0.00 0.00 38.99 4.34
8035 11379 0.101759 GCCATAAGCTGACCGTCGTA 59.898 55.000 0.00 0.00 38.99 3.43
8036 11380 1.864435 GCCATAAGCTGACCGTCGTAG 60.864 57.143 0.00 0.00 38.99 3.51
8037 11381 1.674441 CCATAAGCTGACCGTCGTAGA 59.326 52.381 0.00 0.00 0.00 2.59
8038 11382 2.287069 CCATAAGCTGACCGTCGTAGAG 60.287 54.545 0.00 0.00 36.95 2.43
8039 11383 0.731417 TAAGCTGACCGTCGTAGAGC 59.269 55.000 0.00 1.25 36.95 4.09
8040 11384 1.241990 AAGCTGACCGTCGTAGAGCA 61.242 55.000 10.30 0.00 36.95 4.26
8041 11385 1.032657 AGCTGACCGTCGTAGAGCAT 61.033 55.000 10.30 0.00 36.95 3.79
8042 11386 0.179134 GCTGACCGTCGTAGAGCATT 60.179 55.000 4.19 0.00 36.95 3.56
8043 11387 1.736032 GCTGACCGTCGTAGAGCATTT 60.736 52.381 4.19 0.00 36.95 2.32
8044 11388 1.920574 CTGACCGTCGTAGAGCATTTG 59.079 52.381 0.00 0.00 36.95 2.32
8045 11389 1.271379 TGACCGTCGTAGAGCATTTGT 59.729 47.619 0.00 0.00 36.95 2.83
8046 11390 2.288579 TGACCGTCGTAGAGCATTTGTT 60.289 45.455 0.00 0.00 36.95 2.83
8047 11391 2.066262 ACCGTCGTAGAGCATTTGTTG 58.934 47.619 0.00 0.00 36.95 3.33
8048 11392 2.288579 ACCGTCGTAGAGCATTTGTTGA 60.289 45.455 0.00 0.00 36.95 3.18
8049 11393 2.930040 CCGTCGTAGAGCATTTGTTGAT 59.070 45.455 0.00 0.00 36.95 2.57
8050 11394 4.109766 CCGTCGTAGAGCATTTGTTGATA 58.890 43.478 0.00 0.00 36.95 2.15
8051 11395 4.207224 CCGTCGTAGAGCATTTGTTGATAG 59.793 45.833 0.00 0.00 36.95 2.08
8052 11396 4.207224 CGTCGTAGAGCATTTGTTGATAGG 59.793 45.833 0.00 0.00 36.95 2.57
8053 11397 4.025647 GTCGTAGAGCATTTGTTGATAGGC 60.026 45.833 0.00 0.00 36.95 3.93
8054 11398 3.871006 CGTAGAGCATTTGTTGATAGGCA 59.129 43.478 0.00 0.00 0.00 4.75
8055 11399 4.025396 CGTAGAGCATTTGTTGATAGGCAG 60.025 45.833 0.00 0.00 0.00 4.85
8056 11400 3.285484 AGAGCATTTGTTGATAGGCAGG 58.715 45.455 0.00 0.00 0.00 4.85
8057 11401 3.054139 AGAGCATTTGTTGATAGGCAGGA 60.054 43.478 0.00 0.00 0.00 3.86
8058 11402 3.887716 GAGCATTTGTTGATAGGCAGGAT 59.112 43.478 0.00 0.00 0.00 3.24
8059 11403 5.052693 AGCATTTGTTGATAGGCAGGATA 57.947 39.130 0.00 0.00 0.00 2.59
8060 11404 5.448654 AGCATTTGTTGATAGGCAGGATAA 58.551 37.500 0.00 0.00 0.00 1.75
8061 11405 5.893255 AGCATTTGTTGATAGGCAGGATAAA 59.107 36.000 0.00 0.00 0.00 1.40
8062 11406 6.040166 AGCATTTGTTGATAGGCAGGATAAAG 59.960 38.462 0.00 0.00 0.00 1.85
8063 11407 5.835113 TTTGTTGATAGGCAGGATAAAGC 57.165 39.130 0.00 0.00 0.00 3.51
8064 11408 4.778213 TGTTGATAGGCAGGATAAAGCT 57.222 40.909 0.00 0.00 0.00 3.74
8065 11409 5.116084 TGTTGATAGGCAGGATAAAGCTT 57.884 39.130 0.00 0.00 0.00 3.74
8066 11410 5.126067 TGTTGATAGGCAGGATAAAGCTTC 58.874 41.667 0.00 0.00 0.00 3.86
8067 11411 4.357918 TGATAGGCAGGATAAAGCTTCC 57.642 45.455 0.00 0.00 0.00 3.46
8068 11412 3.716353 TGATAGGCAGGATAAAGCTTCCA 59.284 43.478 0.00 0.00 35.59 3.53
8069 11413 2.725221 AGGCAGGATAAAGCTTCCAG 57.275 50.000 0.00 0.00 35.59 3.86
8070 11414 1.213926 AGGCAGGATAAAGCTTCCAGG 59.786 52.381 0.00 0.00 35.59 4.45
8071 11415 1.685148 GCAGGATAAAGCTTCCAGGG 58.315 55.000 0.00 0.00 35.59 4.45
8072 11416 1.212935 GCAGGATAAAGCTTCCAGGGA 59.787 52.381 0.00 0.00 35.59 4.20
8073 11417 2.357154 GCAGGATAAAGCTTCCAGGGAA 60.357 50.000 0.00 0.09 35.59 3.97
8074 11418 3.689569 GCAGGATAAAGCTTCCAGGGAAT 60.690 47.826 0.00 0.00 35.59 3.01
8075 11419 4.140536 CAGGATAAAGCTTCCAGGGAATC 58.859 47.826 0.00 0.00 35.59 2.52
8076 11420 3.139211 AGGATAAAGCTTCCAGGGAATCC 59.861 47.826 0.00 4.78 35.59 3.01
8077 11421 2.710096 TAAAGCTTCCAGGGAATCCG 57.290 50.000 0.00 0.00 38.33 4.18
8078 11422 0.991920 AAAGCTTCCAGGGAATCCGA 59.008 50.000 0.00 0.00 38.33 4.55
8079 11423 1.216990 AAGCTTCCAGGGAATCCGAT 58.783 50.000 0.39 0.00 38.33 4.18
8080 11424 1.216990 AGCTTCCAGGGAATCCGATT 58.783 50.000 0.39 0.00 38.33 3.34
8081 11425 1.133976 AGCTTCCAGGGAATCCGATTG 60.134 52.381 0.39 0.00 38.33 2.67
8082 11426 1.312815 CTTCCAGGGAATCCGATTGC 58.687 55.000 4.10 4.10 38.33 3.56
8083 11427 0.623194 TTCCAGGGAATCCGATTGCA 59.377 50.000 13.88 0.00 38.33 4.08
8084 11428 0.623194 TCCAGGGAATCCGATTGCAA 59.377 50.000 13.88 0.00 38.33 4.08
8085 11429 0.740737 CCAGGGAATCCGATTGCAAC 59.259 55.000 13.88 0.00 38.33 4.17
8086 11430 1.462616 CAGGGAATCCGATTGCAACA 58.537 50.000 13.88 0.00 38.33 3.33
8087 11431 1.133025 CAGGGAATCCGATTGCAACAC 59.867 52.381 13.88 0.00 38.33 3.32
8088 11432 0.455815 GGGAATCCGATTGCAACACC 59.544 55.000 13.88 1.08 31.57 4.16
8089 11433 1.173043 GGAATCCGATTGCAACACCA 58.827 50.000 0.00 0.00 0.00 4.17
8090 11434 1.135402 GGAATCCGATTGCAACACCAC 60.135 52.381 0.00 0.00 0.00 4.16
8091 11435 0.887933 AATCCGATTGCAACACCACC 59.112 50.000 0.00 0.00 0.00 4.61
8092 11436 1.305219 ATCCGATTGCAACACCACCG 61.305 55.000 0.00 0.00 0.00 4.94
8093 11437 2.560861 CGATTGCAACACCACCGG 59.439 61.111 0.00 0.00 0.00 5.28
8094 11438 2.258013 CGATTGCAACACCACCGGT 61.258 57.895 0.00 0.00 35.62 5.28
8105 11449 1.604604 ACCACCGGTGAATTTGAGTG 58.395 50.000 36.07 17.46 32.98 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 3.684908 TGTGTGTCATGGGATAAACTGG 58.315 45.455 0.00 0.00 0.00 4.00
81 82 4.615912 GCAACTGTGTGTCATGGGATAAAC 60.616 45.833 0.00 0.00 0.00 2.01
162 163 8.659925 TTGTACGAACAGAAAACCAACTAATA 57.340 30.769 0.00 0.00 36.83 0.98
348 349 1.545651 GGGCCTGTAGTTTCAGCAGTT 60.546 52.381 0.84 0.00 34.47 3.16
349 350 0.036875 GGGCCTGTAGTTTCAGCAGT 59.963 55.000 0.84 0.00 34.47 4.40
350 351 0.036732 TGGGCCTGTAGTTTCAGCAG 59.963 55.000 4.53 0.00 34.47 4.24
363 1938 2.625087 CCTTTCCAGATTTGATGGGCCT 60.625 50.000 4.53 0.00 38.44 5.19
366 1941 3.700538 TGACCTTTCCAGATTTGATGGG 58.299 45.455 0.00 0.00 38.44 4.00
486 2061 9.883293 TTCATCATACTAAGGAAGATAAGAGGA 57.117 33.333 0.00 0.00 0.00 3.71
729 2395 9.428097 CATAGCTAGCTCATTGTAATATGTCAA 57.572 33.333 23.26 0.00 0.00 3.18
730 2396 8.037166 CCATAGCTAGCTCATTGTAATATGTCA 58.963 37.037 23.26 0.00 0.00 3.58
731 2397 8.253810 TCCATAGCTAGCTCATTGTAATATGTC 58.746 37.037 23.26 0.00 0.00 3.06
732 2398 8.037758 GTCCATAGCTAGCTCATTGTAATATGT 58.962 37.037 23.26 0.00 0.00 2.29
733 2399 8.037166 TGTCCATAGCTAGCTCATTGTAATATG 58.963 37.037 23.26 15.21 0.00 1.78
734 2400 8.138928 TGTCCATAGCTAGCTCATTGTAATAT 57.861 34.615 23.26 2.36 0.00 1.28
735 2401 7.310052 CCTGTCCATAGCTAGCTCATTGTAATA 60.310 40.741 23.26 0.00 0.00 0.98
736 2402 6.425210 TGTCCATAGCTAGCTCATTGTAAT 57.575 37.500 23.26 4.03 0.00 1.89
737 2403 5.221521 CCTGTCCATAGCTAGCTCATTGTAA 60.222 44.000 23.26 1.17 0.00 2.41
738 2404 4.281941 CCTGTCCATAGCTAGCTCATTGTA 59.718 45.833 23.26 2.06 0.00 2.41
739 2405 3.070734 CCTGTCCATAGCTAGCTCATTGT 59.929 47.826 23.26 0.00 0.00 2.71
740 2406 3.556633 CCCTGTCCATAGCTAGCTCATTG 60.557 52.174 23.26 16.78 0.00 2.82
741 2407 2.636893 CCCTGTCCATAGCTAGCTCATT 59.363 50.000 23.26 4.57 0.00 2.57
742 2408 2.255406 CCCTGTCCATAGCTAGCTCAT 58.745 52.381 23.26 10.50 0.00 2.90
743 2409 1.709578 CCCTGTCCATAGCTAGCTCA 58.290 55.000 23.26 11.77 0.00 4.26
744 2410 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
745 2411 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
746 2412 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
747 2413 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
748 2414 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
749 2415 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
750 2416 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
751 2417 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
752 2418 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
753 2419 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
755 2421 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
756 2422 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
757 2423 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
758 2424 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
759 2425 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
760 2426 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
761 2427 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
762 2428 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
763 2429 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
764 2430 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
765 2431 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
766 2432 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
767 2433 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
768 2434 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
769 2435 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
770 2436 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
771 2437 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
772 2438 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
773 2439 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
774 2440 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
775 2441 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
776 2442 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
777 2443 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
778 2444 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
779 2445 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
780 2446 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
781 2447 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
782 2448 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
783 2449 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
784 2450 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
785 2451 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
786 2452 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
787 2453 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
788 2454 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
796 2462 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
797 2463 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
798 2464 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
799 2465 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
800 2466 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
801 2467 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
802 2468 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
803 2469 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
804 2470 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
805 2471 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
806 2472 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
807 2473 3.197766 AGTGAAACCCATAAGATCTCGCA 59.802 43.478 0.00 0.00 37.80 5.10
808 2474 3.798202 AGTGAAACCCATAAGATCTCGC 58.202 45.455 0.00 0.00 37.80 5.03
809 2475 5.665459 AGAAGTGAAACCCATAAGATCTCG 58.335 41.667 0.00 0.00 37.80 4.04
810 2476 6.704050 GCTAGAAGTGAAACCCATAAGATCTC 59.296 42.308 0.00 0.00 37.80 2.75
811 2477 6.408662 GGCTAGAAGTGAAACCCATAAGATCT 60.409 42.308 0.00 0.00 37.80 2.75
812 2478 5.760743 GGCTAGAAGTGAAACCCATAAGATC 59.239 44.000 0.00 0.00 37.80 2.75
813 2479 5.430089 AGGCTAGAAGTGAAACCCATAAGAT 59.570 40.000 0.00 0.00 37.80 2.40
814 2480 4.783227 AGGCTAGAAGTGAAACCCATAAGA 59.217 41.667 0.00 0.00 37.80 2.10
815 2481 5.104259 AGGCTAGAAGTGAAACCCATAAG 57.896 43.478 0.00 0.00 37.80 1.73
816 2482 5.104652 GGTAGGCTAGAAGTGAAACCCATAA 60.105 44.000 0.00 0.00 37.80 1.90
817 2483 4.407945 GGTAGGCTAGAAGTGAAACCCATA 59.592 45.833 0.00 0.00 37.80 2.74
818 2484 3.200165 GGTAGGCTAGAAGTGAAACCCAT 59.800 47.826 0.00 0.00 37.80 4.00
819 2485 2.570302 GGTAGGCTAGAAGTGAAACCCA 59.430 50.000 0.00 0.00 37.80 4.51
820 2486 2.093075 GGGTAGGCTAGAAGTGAAACCC 60.093 54.545 0.00 0.00 37.80 4.11
821 2487 2.093075 GGGGTAGGCTAGAAGTGAAACC 60.093 54.545 0.00 0.00 37.80 3.27
822 2488 2.570302 TGGGGTAGGCTAGAAGTGAAAC 59.430 50.000 0.00 0.00 0.00 2.78
823 2489 2.910544 TGGGGTAGGCTAGAAGTGAAA 58.089 47.619 0.00 0.00 0.00 2.69
824 2490 2.570302 GTTGGGGTAGGCTAGAAGTGAA 59.430 50.000 0.00 0.00 0.00 3.18
825 2491 2.185387 GTTGGGGTAGGCTAGAAGTGA 58.815 52.381 0.00 0.00 0.00 3.41
826 2492 2.188817 AGTTGGGGTAGGCTAGAAGTG 58.811 52.381 0.00 0.00 0.00 3.16
827 2493 2.572104 CAAGTTGGGGTAGGCTAGAAGT 59.428 50.000 0.00 0.00 0.00 3.01
828 2494 2.572104 ACAAGTTGGGGTAGGCTAGAAG 59.428 50.000 7.96 0.00 0.00 2.85
829 2495 2.627933 ACAAGTTGGGGTAGGCTAGAA 58.372 47.619 7.96 0.00 0.00 2.10
830 2496 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
831 2497 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
832 2498 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
833 2499 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
842 2508 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
843 2509 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
844 2510 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
845 2511 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
846 2512 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
847 2513 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
848 2514 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
849 2515 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
850 2516 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
851 2517 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
852 2518 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
853 2519 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
854 2520 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
855 2521 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
856 2522 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
857 2523 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
858 2524 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
859 2525 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
860 2526 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
861 2527 3.743396 TCAACAACAACAACAACAAAGCC 59.257 39.130 0.00 0.00 0.00 4.35
862 2528 4.210120 TGTCAACAACAACAACAACAAAGC 59.790 37.500 0.00 0.00 34.03 3.51
863 2529 5.896922 TGTCAACAACAACAACAACAAAG 57.103 34.783 0.00 0.00 34.03 2.77
864 2530 8.539770 AATATGTCAACAACAACAACAACAAA 57.460 26.923 0.00 0.00 42.37 2.83
865 2531 9.077674 GTAATATGTCAACAACAACAACAACAA 57.922 29.630 0.00 0.00 42.37 2.83
866 2532 8.244113 TGTAATATGTCAACAACAACAACAACA 58.756 29.630 0.00 0.00 42.37 3.33
867 2533 8.621921 TGTAATATGTCAACAACAACAACAAC 57.378 30.769 0.00 0.00 42.37 3.32
868 2534 9.809096 ATTGTAATATGTCAACAACAACAACAA 57.191 25.926 1.41 0.00 42.37 2.83
869 2535 9.242477 CATTGTAATATGTCAACAACAACAACA 57.758 29.630 1.41 0.00 42.37 3.33
870 2536 8.213812 GCATTGTAATATGTCAACAACAACAAC 58.786 33.333 1.41 0.00 42.37 3.32
871 2537 7.922811 TGCATTGTAATATGTCAACAACAACAA 59.077 29.630 1.41 4.15 42.37 2.83
872 2538 7.428826 TGCATTGTAATATGTCAACAACAACA 58.571 30.769 1.41 0.00 42.37 3.33
873 2539 7.865875 TGCATTGTAATATGTCAACAACAAC 57.134 32.000 1.41 0.00 42.37 3.32
874 2540 8.923683 CAATGCATTGTAATATGTCAACAACAA 58.076 29.630 27.81 1.79 36.06 2.83
875 2541 7.063191 GCAATGCATTGTAATATGTCAACAACA 59.937 33.333 33.67 0.00 40.04 3.33
876 2542 7.063191 TGCAATGCATTGTAATATGTCAACAAC 59.937 33.333 33.67 15.76 39.88 3.32
877 2543 7.095270 TGCAATGCATTGTAATATGTCAACAA 58.905 30.769 33.67 7.12 39.88 2.83
878 2544 6.628185 TGCAATGCATTGTAATATGTCAACA 58.372 32.000 33.67 18.89 39.88 3.33
1555 3225 3.256558 CATGTCTGCTCGAAGTGAATGA 58.743 45.455 0.00 0.00 0.00 2.57
1874 3546 8.980596 TCATTATAACCAAGATTTTTGAGGCAT 58.019 29.630 0.00 0.00 0.00 4.40
2100 3774 2.072487 GCCCCTGTCCATGGCTAGA 61.072 63.158 6.96 0.00 42.01 2.43
2151 3825 2.839486 AGATCTCGCAACCAACTCAA 57.161 45.000 0.00 0.00 0.00 3.02
2635 4327 8.637099 TGTCCTTTTGATGATTTTCACATACAA 58.363 29.630 0.00 0.00 0.00 2.41
2701 4393 3.573538 TGCTGGTAGGTTTACGTAGTGAA 59.426 43.478 0.00 0.00 45.73 3.18
2753 4448 6.422776 ACTTGAGCAGACCAAATTATAACG 57.577 37.500 0.00 0.00 0.00 3.18
2781 4476 7.335924 TCTCTAATTTAACCAGCATTTAACGCT 59.664 33.333 0.00 0.00 41.47 5.07
2864 4560 3.106054 ACATTTGCCATGCCCTATTTGA 58.894 40.909 0.00 0.00 0.00 2.69
3048 4750 2.485426 CACATAAGGGACACAACAGCAG 59.515 50.000 0.00 0.00 0.00 4.24
3049 4751 2.158682 ACACATAAGGGACACAACAGCA 60.159 45.455 0.00 0.00 0.00 4.41
3050 4752 2.504367 ACACATAAGGGACACAACAGC 58.496 47.619 0.00 0.00 0.00 4.40
3475 5190 8.259049 TCCTTTTCATGAAATTTGCAATGATC 57.741 30.769 21.10 0.00 0.00 2.92
3547 5262 7.105588 ACAGATGGCAAAGTTTTTCTTCTTTT 58.894 30.769 0.00 0.00 35.02 2.27
3851 5569 7.922278 GGATTTGCTCTATGTTTTGCAATATCA 59.078 33.333 0.00 0.29 43.53 2.15
4146 6364 1.737793 CGACAAGGTTAAGCATGGTCC 59.262 52.381 13.77 0.00 0.00 4.46
4345 6592 6.561519 ACCATCAGCTAGTTAACTTACCAT 57.438 37.500 14.49 0.00 0.00 3.55
4621 6958 8.796475 ACAATTCACAACTGCAGTTATAATCTT 58.204 29.630 30.67 16.73 36.32 2.40
5165 7531 3.706086 ACAAAGATTCCAAGTGGCAAACT 59.294 39.130 0.00 0.00 42.60 2.66
5286 7652 4.600692 AACAGCAAACCCCTATTTGAAC 57.399 40.909 2.50 0.00 41.28 3.18
5547 7938 3.257375 AGTGCAACATGCTCACAAATCAT 59.743 39.130 12.94 0.00 45.31 2.45
6044 8756 2.095059 GTGTGGAAGTCATGTGGCATTC 60.095 50.000 0.00 0.00 0.00 2.67
6096 8880 6.828785 ACTCTACCTAACAATAATTGGCTTGG 59.171 38.462 0.00 0.00 34.12 3.61
6125 8910 5.381174 TCAGGAATTGTTTTCAGCTGATG 57.619 39.130 19.04 8.76 0.00 3.07
6156 8941 0.248843 GTCTCTAGCAACTGCAGGCT 59.751 55.000 19.93 19.63 45.16 4.58
6169 8954 3.679980 GCTGCGAACAAAAGATGTCTCTA 59.320 43.478 0.00 0.00 42.99 2.43
6177 8964 4.515191 AGAGTAAATGCTGCGAACAAAAGA 59.485 37.500 0.00 0.00 0.00 2.52
6183 8970 7.235430 AGTTATAAGAGTAAATGCTGCGAAC 57.765 36.000 0.00 0.00 0.00 3.95
6186 8973 6.642950 AGCTAGTTATAAGAGTAAATGCTGCG 59.357 38.462 0.00 0.00 0.00 5.18
6652 9736 0.037697 AACTACGAATGCACCAGCGA 60.038 50.000 0.00 0.00 46.23 4.93
6654 9904 1.135689 CCAAACTACGAATGCACCAGC 60.136 52.381 0.00 0.00 42.57 4.85
6860 10139 6.227298 ACAGGAGATCATACAAACTAGTGG 57.773 41.667 0.00 0.00 0.00 4.00
7668 11012 2.492025 ACAGCCCTCCCAATGAATAGA 58.508 47.619 0.00 0.00 0.00 1.98
7678 11022 1.979155 GAGCCAAAACAGCCCTCCC 60.979 63.158 0.00 0.00 0.00 4.30
7686 11030 1.832167 GCACCCCAGAGCCAAAACA 60.832 57.895 0.00 0.00 0.00 2.83
7708 11052 9.851686 AATTTACTGTTCATGAAGGAGCATATA 57.148 29.630 8.80 0.00 0.00 0.86
7793 11137 1.202675 ACTCCCTTTACCGTCGCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
7794 11138 0.393820 ACTCCCTTTACCGTCGCAAA 59.606 50.000 0.00 0.00 0.00 3.68
7795 11139 0.393820 AACTCCCTTTACCGTCGCAA 59.606 50.000 0.00 0.00 0.00 4.85
7796 11140 0.393820 AAACTCCCTTTACCGTCGCA 59.606 50.000 0.00 0.00 0.00 5.10
7797 11141 0.794473 CAAACTCCCTTTACCGTCGC 59.206 55.000 0.00 0.00 0.00 5.19
7798 11142 2.443887 TCAAACTCCCTTTACCGTCG 57.556 50.000 0.00 0.00 0.00 5.12
7799 11143 3.119955 GCAATCAAACTCCCTTTACCGTC 60.120 47.826 0.00 0.00 0.00 4.79
7800 11144 2.817844 GCAATCAAACTCCCTTTACCGT 59.182 45.455 0.00 0.00 0.00 4.83
7801 11145 2.817258 TGCAATCAAACTCCCTTTACCG 59.183 45.455 0.00 0.00 0.00 4.02
7802 11146 4.864704 TTGCAATCAAACTCCCTTTACC 57.135 40.909 0.00 0.00 0.00 2.85
7803 11147 5.842907 ACTTTGCAATCAAACTCCCTTTAC 58.157 37.500 0.00 0.00 37.28 2.01
7804 11148 6.478512 AACTTTGCAATCAAACTCCCTTTA 57.521 33.333 0.00 0.00 37.28 1.85
7805 11149 5.357742 AACTTTGCAATCAAACTCCCTTT 57.642 34.783 0.00 0.00 37.28 3.11
7806 11150 6.670695 ATAACTTTGCAATCAAACTCCCTT 57.329 33.333 0.00 0.00 37.28 3.95
7807 11151 7.175104 TCTATAACTTTGCAATCAAACTCCCT 58.825 34.615 0.00 0.00 37.28 4.20
7808 11152 7.121315 ACTCTATAACTTTGCAATCAAACTCCC 59.879 37.037 0.00 0.00 37.28 4.30
7809 11153 8.045176 ACTCTATAACTTTGCAATCAAACTCC 57.955 34.615 0.00 0.00 37.28 3.85
7814 11158 9.502091 ACTGTAACTCTATAACTTTGCAATCAA 57.498 29.630 0.00 0.00 0.00 2.57
7815 11159 9.151471 GACTGTAACTCTATAACTTTGCAATCA 57.849 33.333 0.00 0.00 0.00 2.57
7816 11160 8.321716 CGACTGTAACTCTATAACTTTGCAATC 58.678 37.037 0.00 0.00 0.00 2.67
7817 11161 8.033038 TCGACTGTAACTCTATAACTTTGCAAT 58.967 33.333 0.00 0.00 0.00 3.56
7818 11162 7.372714 TCGACTGTAACTCTATAACTTTGCAA 58.627 34.615 0.00 0.00 0.00 4.08
7819 11163 6.916440 TCGACTGTAACTCTATAACTTTGCA 58.084 36.000 0.00 0.00 0.00 4.08
7820 11164 7.249147 TCTCGACTGTAACTCTATAACTTTGC 58.751 38.462 0.00 0.00 0.00 3.68
7821 11165 7.911205 CCTCTCGACTGTAACTCTATAACTTTG 59.089 40.741 0.00 0.00 0.00 2.77
7822 11166 7.415429 GCCTCTCGACTGTAACTCTATAACTTT 60.415 40.741 0.00 0.00 0.00 2.66
7823 11167 6.038492 GCCTCTCGACTGTAACTCTATAACTT 59.962 42.308 0.00 0.00 0.00 2.66
7824 11168 5.528320 GCCTCTCGACTGTAACTCTATAACT 59.472 44.000 0.00 0.00 0.00 2.24
7825 11169 5.277925 GGCCTCTCGACTGTAACTCTATAAC 60.278 48.000 0.00 0.00 0.00 1.89
7826 11170 4.820716 GGCCTCTCGACTGTAACTCTATAA 59.179 45.833 0.00 0.00 0.00 0.98
7827 11171 4.141551 TGGCCTCTCGACTGTAACTCTATA 60.142 45.833 3.32 0.00 0.00 1.31
7828 11172 3.215975 GGCCTCTCGACTGTAACTCTAT 58.784 50.000 0.00 0.00 0.00 1.98
7829 11173 2.026542 TGGCCTCTCGACTGTAACTCTA 60.027 50.000 3.32 0.00 0.00 2.43
7830 11174 1.271982 TGGCCTCTCGACTGTAACTCT 60.272 52.381 3.32 0.00 0.00 3.24
7831 11175 1.135344 GTGGCCTCTCGACTGTAACTC 60.135 57.143 3.32 0.00 0.00 3.01
7832 11176 0.889306 GTGGCCTCTCGACTGTAACT 59.111 55.000 3.32 0.00 0.00 2.24
7833 11177 0.601558 TGTGGCCTCTCGACTGTAAC 59.398 55.000 3.32 0.00 0.00 2.50
7834 11178 1.334160 TTGTGGCCTCTCGACTGTAA 58.666 50.000 3.32 0.00 0.00 2.41
7835 11179 1.334160 TTTGTGGCCTCTCGACTGTA 58.666 50.000 3.32 0.00 0.00 2.74
7836 11180 0.687354 ATTTGTGGCCTCTCGACTGT 59.313 50.000 3.32 0.00 0.00 3.55
7837 11181 1.363744 GATTTGTGGCCTCTCGACTG 58.636 55.000 3.32 0.00 0.00 3.51
7838 11182 0.250513 GGATTTGTGGCCTCTCGACT 59.749 55.000 3.32 0.00 0.00 4.18
7839 11183 0.250513 AGGATTTGTGGCCTCTCGAC 59.749 55.000 3.32 0.00 0.00 4.20
7840 11184 0.984230 AAGGATTTGTGGCCTCTCGA 59.016 50.000 3.32 0.00 32.07 4.04
7841 11185 1.089920 CAAGGATTTGTGGCCTCTCG 58.910 55.000 3.32 0.00 32.07 4.04
7842 11186 2.496899 TCAAGGATTTGTGGCCTCTC 57.503 50.000 3.32 0.00 35.73 3.20
7843 11187 3.266772 TGTATCAAGGATTTGTGGCCTCT 59.733 43.478 3.32 0.00 35.73 3.69
7844 11188 3.620488 TGTATCAAGGATTTGTGGCCTC 58.380 45.455 3.32 0.00 35.73 4.70
7845 11189 3.737559 TGTATCAAGGATTTGTGGCCT 57.262 42.857 3.32 0.00 35.73 5.19
7846 11190 3.131046 CCTTGTATCAAGGATTTGTGGCC 59.869 47.826 19.98 0.00 39.81 5.36
7847 11191 3.763897 ACCTTGTATCAAGGATTTGTGGC 59.236 43.478 28.08 0.00 39.81 5.01
7848 11192 4.158394 CCACCTTGTATCAAGGATTTGTGG 59.842 45.833 28.08 21.32 39.81 4.17
7849 11193 5.009631 TCCACCTTGTATCAAGGATTTGTG 58.990 41.667 28.08 17.60 39.81 3.33
7850 11194 5.255397 TCCACCTTGTATCAAGGATTTGT 57.745 39.130 28.08 8.65 39.81 2.83
7851 11195 5.711976 AGTTCCACCTTGTATCAAGGATTTG 59.288 40.000 28.08 18.16 39.81 2.32
7852 11196 5.711976 CAGTTCCACCTTGTATCAAGGATTT 59.288 40.000 28.08 9.27 39.81 2.17
7853 11197 5.014123 TCAGTTCCACCTTGTATCAAGGATT 59.986 40.000 28.08 9.89 39.81 3.01
7854 11198 4.536090 TCAGTTCCACCTTGTATCAAGGAT 59.464 41.667 28.08 13.89 39.81 3.24
7855 11199 3.907474 TCAGTTCCACCTTGTATCAAGGA 59.093 43.478 28.08 9.48 39.81 3.36
7856 11200 4.286297 TCAGTTCCACCTTGTATCAAGG 57.714 45.455 22.11 22.11 43.05 3.61
7857 11201 5.939883 TCATTCAGTTCCACCTTGTATCAAG 59.060 40.000 2.90 2.90 0.00 3.02
7858 11202 5.875224 TCATTCAGTTCCACCTTGTATCAA 58.125 37.500 0.00 0.00 0.00 2.57
7859 11203 5.497464 TCATTCAGTTCCACCTTGTATCA 57.503 39.130 0.00 0.00 0.00 2.15
7860 11204 5.163713 GCTTCATTCAGTTCCACCTTGTATC 60.164 44.000 0.00 0.00 0.00 2.24
7861 11205 4.702131 GCTTCATTCAGTTCCACCTTGTAT 59.298 41.667 0.00 0.00 0.00 2.29
7862 11206 4.072131 GCTTCATTCAGTTCCACCTTGTA 58.928 43.478 0.00 0.00 0.00 2.41
7863 11207 2.887152 GCTTCATTCAGTTCCACCTTGT 59.113 45.455 0.00 0.00 0.00 3.16
7864 11208 2.229784 GGCTTCATTCAGTTCCACCTTG 59.770 50.000 0.00 0.00 0.00 3.61
7865 11209 2.158475 TGGCTTCATTCAGTTCCACCTT 60.158 45.455 0.00 0.00 0.00 3.50
7866 11210 1.425066 TGGCTTCATTCAGTTCCACCT 59.575 47.619 0.00 0.00 0.00 4.00
7867 11211 1.909700 TGGCTTCATTCAGTTCCACC 58.090 50.000 0.00 0.00 0.00 4.61
7868 11212 4.525912 ATTTGGCTTCATTCAGTTCCAC 57.474 40.909 0.00 0.00 0.00 4.02
7869 11213 4.158394 GCTATTTGGCTTCATTCAGTTCCA 59.842 41.667 0.00 0.00 0.00 3.53
7870 11214 4.158394 TGCTATTTGGCTTCATTCAGTTCC 59.842 41.667 0.00 0.00 0.00 3.62
7871 11215 5.105997 ACTGCTATTTGGCTTCATTCAGTTC 60.106 40.000 0.00 0.00 0.00 3.01
7872 11216 4.768968 ACTGCTATTTGGCTTCATTCAGTT 59.231 37.500 0.00 0.00 0.00 3.16
7873 11217 4.338879 ACTGCTATTTGGCTTCATTCAGT 58.661 39.130 0.00 0.00 0.00 3.41
7874 11218 4.978083 ACTGCTATTTGGCTTCATTCAG 57.022 40.909 0.00 0.00 0.00 3.02
7875 11219 4.618927 GCAACTGCTATTTGGCTTCATTCA 60.619 41.667 0.00 0.00 38.21 2.57
7876 11220 3.861689 GCAACTGCTATTTGGCTTCATTC 59.138 43.478 0.00 0.00 38.21 2.67
7877 11221 3.853475 GCAACTGCTATTTGGCTTCATT 58.147 40.909 0.00 0.00 38.21 2.57
7878 11222 3.515330 GCAACTGCTATTTGGCTTCAT 57.485 42.857 0.00 0.00 38.21 2.57
7891 11235 2.126071 TACGGAGCGAGCAACTGC 60.126 61.111 0.00 0.00 42.49 4.40
7892 11236 2.152699 CGTACGGAGCGAGCAACTG 61.153 63.158 7.57 0.00 0.00 3.16
7893 11237 2.178521 CGTACGGAGCGAGCAACT 59.821 61.111 7.57 0.00 0.00 3.16
7894 11238 2.879462 CCGTACGGAGCGAGCAAC 60.879 66.667 30.64 0.00 37.50 4.17
7895 11239 4.789075 GCCGTACGGAGCGAGCAA 62.789 66.667 37.62 0.00 37.50 3.91
7898 11242 1.985447 TTACAGCCGTACGGAGCGAG 61.985 60.000 37.62 21.51 37.50 5.03
7899 11243 2.039974 TTACAGCCGTACGGAGCGA 61.040 57.895 37.62 16.33 37.50 4.93
7900 11244 1.870901 GTTACAGCCGTACGGAGCG 60.871 63.158 37.62 24.64 37.50 5.03
7901 11245 0.388907 TTGTTACAGCCGTACGGAGC 60.389 55.000 37.62 22.55 37.50 4.70
7902 11246 1.625616 CTTGTTACAGCCGTACGGAG 58.374 55.000 37.62 28.41 37.50 4.63
7903 11247 0.388907 GCTTGTTACAGCCGTACGGA 60.389 55.000 37.62 14.37 37.50 4.69
7904 11248 2.075761 GCTTGTTACAGCCGTACGG 58.924 57.895 30.06 30.06 33.21 4.02
7911 11255 2.724839 CGATCGTTTGGCTTGTTACAGC 60.725 50.000 7.03 0.00 39.28 4.40
7912 11256 2.159707 CCGATCGTTTGGCTTGTTACAG 60.160 50.000 15.09 0.00 0.00 2.74
7913 11257 1.801771 CCGATCGTTTGGCTTGTTACA 59.198 47.619 15.09 0.00 0.00 2.41
7914 11258 2.520686 CCGATCGTTTGGCTTGTTAC 57.479 50.000 15.09 0.00 0.00 2.50
7922 11266 0.179111 TAGAGCTGCCGATCGTTTGG 60.179 55.000 15.09 0.00 0.00 3.28
7923 11267 1.858091 ATAGAGCTGCCGATCGTTTG 58.142 50.000 15.09 4.31 0.00 2.93
7924 11268 2.101582 AGAATAGAGCTGCCGATCGTTT 59.898 45.455 15.09 0.00 0.00 3.60
7925 11269 1.683917 AGAATAGAGCTGCCGATCGTT 59.316 47.619 15.09 0.00 0.00 3.85
7926 11270 1.000827 CAGAATAGAGCTGCCGATCGT 60.001 52.381 15.09 0.00 0.00 3.73
7927 11271 1.000827 ACAGAATAGAGCTGCCGATCG 60.001 52.381 8.51 8.51 36.86 3.69
7928 11272 2.810439 ACAGAATAGAGCTGCCGATC 57.190 50.000 0.00 0.00 36.86 3.69
7929 11273 3.254657 GTCTACAGAATAGAGCTGCCGAT 59.745 47.826 0.00 0.00 36.86 4.18
7930 11274 2.619177 GTCTACAGAATAGAGCTGCCGA 59.381 50.000 0.00 0.00 36.86 5.54
7931 11275 2.603412 CGTCTACAGAATAGAGCTGCCG 60.603 54.545 0.00 0.00 36.86 5.69
7932 11276 2.619177 TCGTCTACAGAATAGAGCTGCC 59.381 50.000 0.00 0.00 36.86 4.85
7933 11277 3.314080 AGTCGTCTACAGAATAGAGCTGC 59.686 47.826 0.00 0.00 36.86 5.25
7934 11278 6.606234 TTAGTCGTCTACAGAATAGAGCTG 57.394 41.667 0.00 0.00 39.26 4.24
7935 11279 7.221450 AGATTAGTCGTCTACAGAATAGAGCT 58.779 38.462 0.00 0.00 0.00 4.09
7936 11280 7.429636 AGATTAGTCGTCTACAGAATAGAGC 57.570 40.000 0.00 0.00 0.00 4.09
7937 11281 9.268268 AGAAGATTAGTCGTCTACAGAATAGAG 57.732 37.037 1.88 0.00 40.68 2.43
7938 11282 9.047371 CAGAAGATTAGTCGTCTACAGAATAGA 57.953 37.037 3.49 0.00 40.54 1.98
7939 11283 9.047371 TCAGAAGATTAGTCGTCTACAGAATAG 57.953 37.037 3.49 0.00 40.54 1.73
7940 11284 8.959705 TCAGAAGATTAGTCGTCTACAGAATA 57.040 34.615 3.49 0.00 40.54 1.75
7941 11285 7.012894 CCTCAGAAGATTAGTCGTCTACAGAAT 59.987 40.741 3.49 0.00 40.54 2.40
7942 11286 6.316640 CCTCAGAAGATTAGTCGTCTACAGAA 59.683 42.308 3.49 0.00 40.54 3.02
7943 11287 5.818336 CCTCAGAAGATTAGTCGTCTACAGA 59.182 44.000 3.49 0.00 40.54 3.41
7944 11288 5.587043 ACCTCAGAAGATTAGTCGTCTACAG 59.413 44.000 3.49 3.65 40.54 2.74
7945 11289 5.498393 ACCTCAGAAGATTAGTCGTCTACA 58.502 41.667 3.49 0.00 40.54 2.74
7946 11290 6.538021 TGTACCTCAGAAGATTAGTCGTCTAC 59.462 42.308 3.49 0.00 40.54 2.59
7947 11291 6.647229 TGTACCTCAGAAGATTAGTCGTCTA 58.353 40.000 3.49 0.00 40.54 2.59
7948 11292 5.498393 TGTACCTCAGAAGATTAGTCGTCT 58.502 41.667 0.00 0.00 42.77 4.18
7949 11293 5.814764 TGTACCTCAGAAGATTAGTCGTC 57.185 43.478 0.00 0.00 33.67 4.20
7950 11294 6.208994 AGTTTGTACCTCAGAAGATTAGTCGT 59.791 38.462 0.00 0.00 0.00 4.34
7951 11295 6.622549 AGTTTGTACCTCAGAAGATTAGTCG 58.377 40.000 0.00 0.00 0.00 4.18
7952 11296 7.036829 GGAGTTTGTACCTCAGAAGATTAGTC 58.963 42.308 0.00 0.00 0.00 2.59
7953 11297 6.070710 GGGAGTTTGTACCTCAGAAGATTAGT 60.071 42.308 0.00 0.00 0.00 2.24
7954 11298 6.155393 AGGGAGTTTGTACCTCAGAAGATTAG 59.845 42.308 0.00 0.00 0.00 1.73
7955 11299 6.023603 AGGGAGTTTGTACCTCAGAAGATTA 58.976 40.000 0.00 0.00 0.00 1.75
7956 11300 4.846940 AGGGAGTTTGTACCTCAGAAGATT 59.153 41.667 0.00 0.00 0.00 2.40
7957 11301 4.430441 AGGGAGTTTGTACCTCAGAAGAT 58.570 43.478 0.00 0.00 0.00 2.40
7958 11302 3.858135 AGGGAGTTTGTACCTCAGAAGA 58.142 45.455 0.00 0.00 0.00 2.87
7959 11303 4.773149 AGTAGGGAGTTTGTACCTCAGAAG 59.227 45.833 0.00 0.00 35.84 2.85
7960 11304 4.748701 AGTAGGGAGTTTGTACCTCAGAA 58.251 43.478 0.00 0.00 35.84 3.02
7961 11305 4.399483 AGTAGGGAGTTTGTACCTCAGA 57.601 45.455 0.00 0.00 35.84 3.27
7962 11306 5.262804 AGTAGTAGGGAGTTTGTACCTCAG 58.737 45.833 0.00 0.00 35.84 3.35
7963 11307 5.266709 AGTAGTAGGGAGTTTGTACCTCA 57.733 43.478 0.00 0.00 35.84 3.86
7964 11308 5.299028 GCTAGTAGTAGGGAGTTTGTACCTC 59.701 48.000 6.73 0.00 35.84 3.85
7965 11309 5.044254 AGCTAGTAGTAGGGAGTTTGTACCT 60.044 44.000 6.73 0.00 38.40 3.08
7966 11310 5.199723 AGCTAGTAGTAGGGAGTTTGTACC 58.800 45.833 6.73 0.00 0.00 3.34
7967 11311 7.872113 TTAGCTAGTAGTAGGGAGTTTGTAC 57.128 40.000 6.73 0.00 0.00 2.90
7969 11313 7.974730 ATTTAGCTAGTAGTAGGGAGTTTGT 57.025 36.000 6.73 0.00 0.00 2.83
7970 11314 9.134055 AGTATTTAGCTAGTAGTAGGGAGTTTG 57.866 37.037 6.73 0.00 0.00 2.93
7971 11315 9.712250 AAGTATTTAGCTAGTAGTAGGGAGTTT 57.288 33.333 6.73 0.00 0.00 2.66
7983 11327 9.027202 GCCCTAGAGATTAAGTATTTAGCTAGT 57.973 37.037 0.00 0.00 0.00 2.57
7984 11328 9.250246 AGCCCTAGAGATTAAGTATTTAGCTAG 57.750 37.037 0.00 0.00 0.00 3.42
7986 11330 9.603189 TTAGCCCTAGAGATTAAGTATTTAGCT 57.397 33.333 0.00 0.00 0.00 3.32
7987 11331 9.642327 GTTAGCCCTAGAGATTAAGTATTTAGC 57.358 37.037 0.00 0.00 0.00 3.09
7990 11334 8.652290 CCAGTTAGCCCTAGAGATTAAGTATTT 58.348 37.037 0.00 0.00 0.00 1.40
7991 11335 7.256368 GCCAGTTAGCCCTAGAGATTAAGTATT 60.256 40.741 0.00 0.00 0.00 1.89
7992 11336 6.211785 GCCAGTTAGCCCTAGAGATTAAGTAT 59.788 42.308 0.00 0.00 0.00 2.12
7993 11337 5.539193 GCCAGTTAGCCCTAGAGATTAAGTA 59.461 44.000 0.00 0.00 0.00 2.24
7994 11338 4.345547 GCCAGTTAGCCCTAGAGATTAAGT 59.654 45.833 0.00 0.00 0.00 2.24
7995 11339 4.888917 GCCAGTTAGCCCTAGAGATTAAG 58.111 47.826 0.00 0.00 0.00 1.85
7996 11340 4.957684 GCCAGTTAGCCCTAGAGATTAA 57.042 45.455 0.00 0.00 0.00 1.40
8008 11352 1.943340 GTCAGCTTATGGCCAGTTAGC 59.057 52.381 22.35 22.35 43.05 3.09
8016 11360 0.101759 TACGACGGTCAGCTTATGGC 59.898 55.000 9.10 0.00 42.19 4.40
8017 11361 1.674441 TCTACGACGGTCAGCTTATGG 59.326 52.381 9.10 0.00 0.00 2.74
8018 11362 2.855187 GCTCTACGACGGTCAGCTTATG 60.855 54.545 9.10 0.00 32.16 1.90
8019 11363 1.334243 GCTCTACGACGGTCAGCTTAT 59.666 52.381 9.10 0.00 32.16 1.73
8020 11364 0.731417 GCTCTACGACGGTCAGCTTA 59.269 55.000 9.10 0.00 32.16 3.09
8021 11365 1.241990 TGCTCTACGACGGTCAGCTT 61.242 55.000 16.17 0.00 34.68 3.74
8022 11366 1.032657 ATGCTCTACGACGGTCAGCT 61.033 55.000 16.17 3.27 34.68 4.24
8023 11367 0.179134 AATGCTCTACGACGGTCAGC 60.179 55.000 9.10 9.80 34.34 4.26
8024 11368 1.920574 CAAATGCTCTACGACGGTCAG 59.079 52.381 9.10 3.87 0.00 3.51
8025 11369 1.271379 ACAAATGCTCTACGACGGTCA 59.729 47.619 9.10 0.00 0.00 4.02
8026 11370 1.992170 ACAAATGCTCTACGACGGTC 58.008 50.000 0.00 0.00 0.00 4.79
8027 11371 2.066262 CAACAAATGCTCTACGACGGT 58.934 47.619 0.00 0.00 0.00 4.83
8028 11372 2.333926 TCAACAAATGCTCTACGACGG 58.666 47.619 0.00 0.00 0.00 4.79
8029 11373 4.207224 CCTATCAACAAATGCTCTACGACG 59.793 45.833 0.00 0.00 0.00 5.12
8030 11374 4.025647 GCCTATCAACAAATGCTCTACGAC 60.026 45.833 0.00 0.00 0.00 4.34
8031 11375 4.119862 GCCTATCAACAAATGCTCTACGA 58.880 43.478 0.00 0.00 0.00 3.43
8032 11376 3.871006 TGCCTATCAACAAATGCTCTACG 59.129 43.478 0.00 0.00 0.00 3.51
8033 11377 4.274459 CCTGCCTATCAACAAATGCTCTAC 59.726 45.833 0.00 0.00 0.00 2.59
8034 11378 4.164030 TCCTGCCTATCAACAAATGCTCTA 59.836 41.667 0.00 0.00 0.00 2.43
8035 11379 3.054139 TCCTGCCTATCAACAAATGCTCT 60.054 43.478 0.00 0.00 0.00 4.09
8036 11380 3.282021 TCCTGCCTATCAACAAATGCTC 58.718 45.455 0.00 0.00 0.00 4.26
8037 11381 3.370840 TCCTGCCTATCAACAAATGCT 57.629 42.857 0.00 0.00 0.00 3.79
8038 11382 5.772825 TTATCCTGCCTATCAACAAATGC 57.227 39.130 0.00 0.00 0.00 3.56
8039 11383 6.040166 AGCTTTATCCTGCCTATCAACAAATG 59.960 38.462 0.00 0.00 0.00 2.32
8040 11384 6.131961 AGCTTTATCCTGCCTATCAACAAAT 58.868 36.000 0.00 0.00 0.00 2.32
8041 11385 5.509498 AGCTTTATCCTGCCTATCAACAAA 58.491 37.500 0.00 0.00 0.00 2.83
8042 11386 5.116084 AGCTTTATCCTGCCTATCAACAA 57.884 39.130 0.00 0.00 0.00 2.83
8043 11387 4.778213 AGCTTTATCCTGCCTATCAACA 57.222 40.909 0.00 0.00 0.00 3.33
8044 11388 4.517075 GGAAGCTTTATCCTGCCTATCAAC 59.483 45.833 0.00 0.00 33.98 3.18
8045 11389 4.165950 TGGAAGCTTTATCCTGCCTATCAA 59.834 41.667 0.00 0.00 37.85 2.57
8046 11390 3.716353 TGGAAGCTTTATCCTGCCTATCA 59.284 43.478 0.00 0.00 37.85 2.15
8047 11391 4.322567 CTGGAAGCTTTATCCTGCCTATC 58.677 47.826 0.00 0.00 37.85 2.08
8048 11392 3.073650 CCTGGAAGCTTTATCCTGCCTAT 59.926 47.826 0.00 0.00 37.85 2.57
8049 11393 2.439507 CCTGGAAGCTTTATCCTGCCTA 59.560 50.000 0.00 0.00 37.85 3.93
8050 11394 1.213926 CCTGGAAGCTTTATCCTGCCT 59.786 52.381 0.00 0.00 37.85 4.75
8051 11395 1.685148 CCTGGAAGCTTTATCCTGCC 58.315 55.000 0.00 0.00 37.85 4.85
8052 11396 1.212935 TCCCTGGAAGCTTTATCCTGC 59.787 52.381 0.00 0.00 37.85 4.85
8053 11397 3.652057 TTCCCTGGAAGCTTTATCCTG 57.348 47.619 0.00 1.29 37.85 3.86
8054 11398 3.139211 GGATTCCCTGGAAGCTTTATCCT 59.861 47.826 13.38 0.00 40.05 3.24
8055 11399 3.491342 GGATTCCCTGGAAGCTTTATCC 58.509 50.000 13.38 6.24 40.05 2.59
8056 11400 3.142174 CGGATTCCCTGGAAGCTTTATC 58.858 50.000 13.38 0.95 40.05 1.75
8057 11401 2.777692 TCGGATTCCCTGGAAGCTTTAT 59.222 45.455 13.38 0.00 40.05 1.40
8058 11402 2.193127 TCGGATTCCCTGGAAGCTTTA 58.807 47.619 13.38 0.00 40.05 1.85
8059 11403 0.991920 TCGGATTCCCTGGAAGCTTT 59.008 50.000 13.38 0.00 40.05 3.51
8060 11404 1.216990 ATCGGATTCCCTGGAAGCTT 58.783 50.000 13.38 0.00 40.05 3.74
8061 11405 1.133976 CAATCGGATTCCCTGGAAGCT 60.134 52.381 13.38 0.00 40.05 3.74
8062 11406 1.312815 CAATCGGATTCCCTGGAAGC 58.687 55.000 5.62 5.62 39.52 3.86
8063 11407 1.312815 GCAATCGGATTCCCTGGAAG 58.687 55.000 4.72 0.00 37.56 3.46
8064 11408 0.623194 TGCAATCGGATTCCCTGGAA 59.377 50.000 0.00 0.22 38.59 3.53
8065 11409 0.623194 TTGCAATCGGATTCCCTGGA 59.377 50.000 0.00 0.00 0.00 3.86
8066 11410 0.740737 GTTGCAATCGGATTCCCTGG 59.259 55.000 0.59 0.00 0.00 4.45
8067 11411 1.133025 GTGTTGCAATCGGATTCCCTG 59.867 52.381 0.59 0.00 0.00 4.45
8068 11412 1.463674 GTGTTGCAATCGGATTCCCT 58.536 50.000 0.59 0.00 0.00 4.20
8069 11413 0.455815 GGTGTTGCAATCGGATTCCC 59.544 55.000 0.59 0.00 0.00 3.97
8070 11414 1.135402 GTGGTGTTGCAATCGGATTCC 60.135 52.381 0.59 0.00 0.00 3.01
8071 11415 1.135402 GGTGGTGTTGCAATCGGATTC 60.135 52.381 0.59 0.00 0.00 2.52
8072 11416 0.887933 GGTGGTGTTGCAATCGGATT 59.112 50.000 0.59 0.00 0.00 3.01
8073 11417 1.305219 CGGTGGTGTTGCAATCGGAT 61.305 55.000 0.59 0.00 0.00 4.18
8074 11418 1.963855 CGGTGGTGTTGCAATCGGA 60.964 57.895 0.59 0.00 0.00 4.55
8075 11419 2.560861 CGGTGGTGTTGCAATCGG 59.439 61.111 0.59 0.00 0.00 4.18
8076 11420 2.258013 ACCGGTGGTGTTGCAATCG 61.258 57.895 6.12 0.00 32.98 3.34
8077 11421 3.758172 ACCGGTGGTGTTGCAATC 58.242 55.556 6.12 0.00 32.98 2.67
8086 11430 1.604604 CACTCAAATTCACCGGTGGT 58.395 50.000 33.40 20.02 35.62 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.