Multiple sequence alignment - TraesCS2D01G012800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G012800 chr2D 100.000 4866 0 0 1 4866 6203776 6208641 0.000000e+00 8986
1 TraesCS2D01G012800 chr2D 94.326 282 13 3 2287 2567 481281923 481282202 3.480000e-116 429
2 TraesCS2D01G012800 chr2D 86.869 99 10 2 1 97 246229628 246229531 1.850000e-19 108
3 TraesCS2D01G012800 chr2B 93.930 2323 113 7 2557 4866 5042073 5039766 0.000000e+00 3483
4 TraesCS2D01G012800 chr2B 91.581 1651 110 12 2754 4387 5335623 5333985 0.000000e+00 2252
5 TraesCS2D01G012800 chr2B 90.213 1788 79 38 164 1922 5044338 5042618 0.000000e+00 2244
6 TraesCS2D01G012800 chr2B 92.873 463 27 4 4410 4866 5333189 5332727 0.000000e+00 667
7 TraesCS2D01G012800 chr2B 96.970 363 11 0 1919 2281 5042461 5042099 1.160000e-170 610
8 TraesCS2D01G012800 chr5A 79.922 1026 161 31 892 1909 640399886 640400874 0.000000e+00 712
9 TraesCS2D01G012800 chr5A 79.469 716 93 30 3204 3908 640403407 640404079 4.440000e-125 459
10 TraesCS2D01G012800 chr5A 82.317 328 41 9 2807 3131 640403095 640403408 8.030000e-68 268
11 TraesCS2D01G012800 chr5A 87.629 97 8 3 3 97 224644301 224644207 5.150000e-20 110
12 TraesCS2D01G012800 chr5A 87.629 97 9 2 3 97 592192269 592192174 5.150000e-20 110
13 TraesCS2D01G012800 chr5B 80.530 642 90 24 3285 3910 702757677 702757055 1.230000e-125 460
14 TraesCS2D01G012800 chr5B 80.374 642 90 24 3285 3910 702606800 702606179 5.740000e-124 455
15 TraesCS2D01G012800 chr5B 80.374 642 90 23 3285 3910 702739394 702738773 5.740000e-124 455
16 TraesCS2D01G012800 chr5B 80.249 643 90 26 3285 3910 702644587 702643965 2.670000e-122 449
17 TraesCS2D01G012800 chr5B 80.062 642 93 23 3285 3910 702625437 702624815 1.240000e-120 444
18 TraesCS2D01G012800 chr5B 80.062 642 93 23 3285 3910 702796231 702795609 1.240000e-120 444
19 TraesCS2D01G012800 chr5B 91.667 252 21 0 2002 2253 702607972 702607721 2.790000e-92 350
20 TraesCS2D01G012800 chr5B 91.270 252 22 0 2002 2253 702797326 702797075 1.300000e-90 344
21 TraesCS2D01G012800 chr5B 90.873 252 23 0 2002 2253 702740573 702740322 6.030000e-89 339
22 TraesCS2D01G012800 chr5B 90.873 252 23 0 2002 2253 702758760 702758509 6.030000e-89 339
23 TraesCS2D01G012800 chr5B 90.476 252 24 0 2002 2253 702626520 702626269 2.810000e-87 333
24 TraesCS2D01G012800 chr5B 90.476 252 24 0 2002 2253 702645682 702645431 2.810000e-87 333
25 TraesCS2D01G012800 chr5B 88.961 154 14 3 2807 2957 702645027 702644874 2.310000e-43 187
26 TraesCS2D01G012800 chr5B 88.961 154 14 3 2807 2957 702796671 702796518 2.310000e-43 187
27 TraesCS2D01G012800 chr5B 86.471 170 20 2 2788 2957 702607253 702607087 2.990000e-42 183
28 TraesCS2D01G012800 chr5B 90.647 139 10 2 2788 2926 702625885 702625750 1.080000e-41 182
29 TraesCS2D01G012800 chr5B 90.647 139 10 2 2788 2926 702758125 702757990 1.080000e-41 182
30 TraesCS2D01G012800 chr5B 89.412 85 9 0 3 87 285705498 285705582 1.850000e-19 108
31 TraesCS2D01G012800 chrUn 79.525 674 103 21 3250 3908 110464998 110465651 9.610000e-122 448
32 TraesCS2D01G012800 chrUn 87.454 271 34 0 2002 2272 224673465 224673735 3.660000e-81 313
33 TraesCS2D01G012800 chrUn 87.454 271 34 0 2002 2272 340347163 340346893 3.660000e-81 313
34 TraesCS2D01G012800 chrUn 83.972 287 31 6 932 1218 224672279 224672550 1.340000e-65 261
35 TraesCS2D01G012800 chrUn 83.673 294 31 7 932 1225 340348349 340348073 1.340000e-65 261
36 TraesCS2D01G012800 chrUn 83.624 287 32 6 932 1218 327006572 327006843 6.250000e-64 255
37 TraesCS2D01G012800 chrUn 83.226 155 26 0 1754 1908 224673174 224673328 5.080000e-30 143
38 TraesCS2D01G012800 chrUn 83.553 152 25 0 1757 1908 340347451 340347300 5.080000e-30 143
39 TraesCS2D01G012800 chrUn 83.226 155 26 0 1754 1908 351702696 351702850 5.080000e-30 143
40 TraesCS2D01G012800 chrUn 83.226 155 26 0 1754 1908 351725196 351725350 5.080000e-30 143
41 TraesCS2D01G012800 chrUn 83.553 152 25 0 1757 1908 407255765 407255614 5.080000e-30 143
42 TraesCS2D01G012800 chr6D 95.035 282 12 2 2287 2567 151317485 151317205 4.470000e-120 442
43 TraesCS2D01G012800 chr1D 96.617 266 8 1 2300 2565 423924757 423924493 1.610000e-119 440
44 TraesCS2D01G012800 chr1B 95.539 269 12 0 2293 2561 386772387 386772655 9.680000e-117 431
45 TraesCS2D01G012800 chr7D 95.522 268 11 1 2296 2562 209183932 209183665 1.250000e-115 427
46 TraesCS2D01G012800 chr3B 95.833 264 11 0 2297 2560 168523814 168523551 1.250000e-115 427
47 TraesCS2D01G012800 chr2A 95.817 263 11 0 2299 2561 29592010 29591748 4.500000e-115 425
48 TraesCS2D01G012800 chr7A 95.489 266 11 1 2295 2560 558085167 558084903 1.620000e-114 424
49 TraesCS2D01G012800 chr7A 87.778 90 11 0 1 90 566155797 566155708 6.660000e-19 106
50 TraesCS2D01G012800 chr3D 93.885 278 14 3 2284 2561 10339285 10339559 2.710000e-112 416
51 TraesCS2D01G012800 chr4A 87.931 232 26 2 987 1218 629110470 629110699 6.210000e-69 272
52 TraesCS2D01G012800 chr4A 83.333 156 26 0 1754 1909 629118415 629118570 1.410000e-30 145
53 TraesCS2D01G012800 chr4B 93.220 118 8 0 2808 2925 660491322 660491439 1.800000e-39 174
54 TraesCS2D01G012800 chr5D 87.500 96 11 1 3 97 157481780 157481875 5.150000e-20 110
55 TraesCS2D01G012800 chr5D 88.636 88 10 0 3 90 157489218 157489305 1.850000e-19 108
56 TraesCS2D01G012800 chr5D 86.869 99 10 2 1 97 434885973 434885876 1.850000e-19 108
57 TraesCS2D01G012800 chr4D 86.813 91 12 0 1 91 489225796 489225706 8.620000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G012800 chr2D 6203776 6208641 4865 False 8986.000000 8986 100.000000 1 4866 1 chr2D.!!$F1 4865
1 TraesCS2D01G012800 chr2B 5039766 5044338 4572 True 2112.333333 3483 93.704333 164 4866 3 chr2B.!!$R1 4702
2 TraesCS2D01G012800 chr2B 5332727 5335623 2896 True 1459.500000 2252 92.227000 2754 4866 2 chr2B.!!$R2 2112
3 TraesCS2D01G012800 chr5A 640399886 640404079 4193 False 479.666667 712 80.569333 892 3908 3 chr5A.!!$F1 3016
4 TraesCS2D01G012800 chr5B 702738773 702740573 1800 True 397.000000 455 85.623500 2002 3910 2 chr5B.!!$R4 1908
5 TraesCS2D01G012800 chr5B 702606179 702607972 1793 True 329.333333 455 86.170667 2002 3910 3 chr5B.!!$R1 1908
6 TraesCS2D01G012800 chr5B 702757055 702758760 1705 True 327.000000 460 87.350000 2002 3910 3 chr5B.!!$R5 1908
7 TraesCS2D01G012800 chr5B 702795609 702797326 1717 True 325.000000 444 86.764333 2002 3910 3 chr5B.!!$R6 1908
8 TraesCS2D01G012800 chr5B 702643965 702645682 1717 True 323.000000 449 86.562000 2002 3910 3 chr5B.!!$R3 1908
9 TraesCS2D01G012800 chr5B 702624815 702626520 1705 True 319.666667 444 87.061667 2002 3910 3 chr5B.!!$R2 1908
10 TraesCS2D01G012800 chrUn 110464998 110465651 653 False 448.000000 448 79.525000 3250 3908 1 chrUn.!!$F1 658
11 TraesCS2D01G012800 chrUn 224672279 224673735 1456 False 239.000000 313 84.884000 932 2272 3 chrUn.!!$F5 1340
12 TraesCS2D01G012800 chrUn 340346893 340348349 1456 True 239.000000 313 84.893333 932 2272 3 chrUn.!!$R2 1340

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.325272 GGAGTTGTTGGTCTCTCCCC 59.675 60.0 0.00 0.00 40.14 4.81 F
158 159 0.325272 GAGTTGTTGGTCTCTCCCCC 59.675 60.0 0.00 0.00 34.77 5.40 F
1866 2017 0.179062 CAGGGCTCTTCTCATTCCCG 60.179 60.0 0.00 0.00 41.76 5.14 F
2073 2902 0.391793 GAGAGGTTAGGTGCACCAGC 60.392 60.0 36.39 25.53 36.67 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1317 1387 0.106719 CGGACCATACCTGCCCAAAT 60.107 55.000 0.00 0.00 0.00 2.32 R
2073 2902 0.721718 GAGGTCGCCATGTTTCTTCG 59.278 55.000 0.00 0.00 0.00 3.79 R
2772 4581 1.445716 GCATGCAGCTGTCAGGATCC 61.446 60.000 21.36 2.48 41.15 3.36 R
3981 5906 3.257873 CACATGAATGCCCCAAGTAACAA 59.742 43.478 0.00 0.00 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.346766 TGGCACAGTGAACAAGATGT 57.653 45.000 4.15 0.00 0.00 3.06
20 21 2.653726 TGGCACAGTGAACAAGATGTT 58.346 42.857 4.15 0.00 44.37 2.71
21 22 2.358582 TGGCACAGTGAACAAGATGTTG 59.641 45.455 4.15 0.13 41.28 3.33
22 23 2.618241 GGCACAGTGAACAAGATGTTGA 59.382 45.455 9.96 0.00 41.28 3.18
23 24 3.254166 GGCACAGTGAACAAGATGTTGAT 59.746 43.478 9.96 0.00 41.28 2.57
24 25 4.261741 GGCACAGTGAACAAGATGTTGATT 60.262 41.667 9.96 0.05 41.28 2.57
25 26 4.913924 GCACAGTGAACAAGATGTTGATTC 59.086 41.667 9.96 9.65 41.28 2.52
26 27 5.506151 GCACAGTGAACAAGATGTTGATTCA 60.506 40.000 9.96 11.89 41.28 2.57
27 28 6.675026 CACAGTGAACAAGATGTTGATTCAT 58.325 36.000 9.96 4.19 41.28 2.57
28 29 6.581166 CACAGTGAACAAGATGTTGATTCATG 59.419 38.462 9.96 14.66 41.28 3.07
29 30 6.090783 CAGTGAACAAGATGTTGATTCATGG 58.909 40.000 9.96 7.97 41.28 3.66
30 31 5.184479 AGTGAACAAGATGTTGATTCATGGG 59.816 40.000 9.96 0.00 41.28 4.00
31 32 4.463539 TGAACAAGATGTTGATTCATGGGG 59.536 41.667 9.96 0.00 41.28 4.96
32 33 4.320546 ACAAGATGTTGATTCATGGGGA 57.679 40.909 9.96 0.00 37.10 4.81
33 34 4.875389 ACAAGATGTTGATTCATGGGGAT 58.125 39.130 9.96 0.00 37.10 3.85
34 35 4.647853 ACAAGATGTTGATTCATGGGGATG 59.352 41.667 9.96 0.00 37.10 3.51
35 36 3.228453 AGATGTTGATTCATGGGGATGC 58.772 45.455 0.00 0.00 0.00 3.91
36 37 1.779221 TGTTGATTCATGGGGATGCC 58.221 50.000 0.00 0.00 0.00 4.40
37 38 1.006878 TGTTGATTCATGGGGATGCCA 59.993 47.619 5.30 0.00 0.00 4.92
38 39 2.322658 GTTGATTCATGGGGATGCCAT 58.677 47.619 5.30 0.00 0.00 4.40
39 40 2.701951 GTTGATTCATGGGGATGCCATT 59.298 45.455 5.30 0.00 0.00 3.16
40 41 3.896888 GTTGATTCATGGGGATGCCATTA 59.103 43.478 5.30 0.00 0.00 1.90
41 42 4.196118 TGATTCATGGGGATGCCATTAA 57.804 40.909 5.30 0.00 0.00 1.40
42 43 4.554683 TGATTCATGGGGATGCCATTAAA 58.445 39.130 5.30 0.00 0.00 1.52
43 44 5.156649 TGATTCATGGGGATGCCATTAAAT 58.843 37.500 5.30 0.00 0.00 1.40
44 45 5.246656 TGATTCATGGGGATGCCATTAAATC 59.753 40.000 5.30 9.27 0.00 2.17
45 46 4.474303 TCATGGGGATGCCATTAAATCT 57.526 40.909 5.30 0.00 0.00 2.40
46 47 4.410099 TCATGGGGATGCCATTAAATCTC 58.590 43.478 5.30 0.00 0.00 2.75
47 48 3.969466 TGGGGATGCCATTAAATCTCA 57.031 42.857 5.30 0.00 0.00 3.27
48 49 3.565307 TGGGGATGCCATTAAATCTCAC 58.435 45.455 5.30 0.00 0.00 3.51
49 50 2.893489 GGGGATGCCATTAAATCTCACC 59.107 50.000 5.30 0.00 0.00 4.02
50 51 3.437052 GGGGATGCCATTAAATCTCACCT 60.437 47.826 5.30 0.00 0.00 4.00
51 52 3.823304 GGGATGCCATTAAATCTCACCTC 59.177 47.826 0.00 0.00 0.00 3.85
52 53 3.499918 GGATGCCATTAAATCTCACCTCG 59.500 47.826 0.00 0.00 0.00 4.63
53 54 2.917933 TGCCATTAAATCTCACCTCGG 58.082 47.619 0.00 0.00 0.00 4.63
54 55 2.503765 TGCCATTAAATCTCACCTCGGA 59.496 45.455 0.00 0.00 0.00 4.55
55 56 3.136443 TGCCATTAAATCTCACCTCGGAT 59.864 43.478 0.00 0.00 0.00 4.18
56 57 4.346709 TGCCATTAAATCTCACCTCGGATA 59.653 41.667 0.00 0.00 0.00 2.59
57 58 5.013079 TGCCATTAAATCTCACCTCGGATAT 59.987 40.000 0.00 0.00 0.00 1.63
58 59 5.940470 GCCATTAAATCTCACCTCGGATATT 59.060 40.000 0.00 0.00 0.00 1.28
59 60 6.431234 GCCATTAAATCTCACCTCGGATATTT 59.569 38.462 0.00 0.00 31.24 1.40
60 61 7.573843 GCCATTAAATCTCACCTCGGATATTTG 60.574 40.741 0.00 0.00 29.70 2.32
61 62 7.445402 CCATTAAATCTCACCTCGGATATTTGT 59.555 37.037 0.00 0.00 29.70 2.83
62 63 9.489084 CATTAAATCTCACCTCGGATATTTGTA 57.511 33.333 0.00 0.00 29.70 2.41
64 65 7.787725 AAATCTCACCTCGGATATTTGTAAC 57.212 36.000 0.00 0.00 0.00 2.50
65 66 5.925506 TCTCACCTCGGATATTTGTAACA 57.074 39.130 0.00 0.00 0.00 2.41
66 67 6.479972 TCTCACCTCGGATATTTGTAACAT 57.520 37.500 0.00 0.00 0.00 2.71
67 68 7.591421 TCTCACCTCGGATATTTGTAACATA 57.409 36.000 0.00 0.00 0.00 2.29
68 69 8.190326 TCTCACCTCGGATATTTGTAACATAT 57.810 34.615 0.00 0.00 0.00 1.78
69 70 8.304596 TCTCACCTCGGATATTTGTAACATATC 58.695 37.037 0.00 0.00 34.17 1.63
70 71 7.958088 TCACCTCGGATATTTGTAACATATCA 58.042 34.615 0.00 0.00 35.92 2.15
71 72 7.870954 TCACCTCGGATATTTGTAACATATCAC 59.129 37.037 0.00 0.00 35.92 3.06
72 73 6.866770 ACCTCGGATATTTGTAACATATCACG 59.133 38.462 0.00 0.00 35.92 4.35
73 74 7.088272 CCTCGGATATTTGTAACATATCACGA 58.912 38.462 0.00 0.00 35.92 4.35
74 75 7.597369 CCTCGGATATTTGTAACATATCACGAA 59.403 37.037 0.00 0.00 36.70 3.85
75 76 8.515473 TCGGATATTTGTAACATATCACGAAG 57.485 34.615 0.00 0.00 35.59 3.79
76 77 7.115805 TCGGATATTTGTAACATATCACGAAGC 59.884 37.037 0.00 0.00 35.59 3.86
77 78 7.095816 CGGATATTTGTAACATATCACGAAGCA 60.096 37.037 0.00 0.00 35.92 3.91
78 79 8.556194 GGATATTTGTAACATATCACGAAGCAA 58.444 33.333 0.00 0.00 35.92 3.91
79 80 9.370126 GATATTTGTAACATATCACGAAGCAAC 57.630 33.333 0.00 0.00 34.80 4.17
80 81 6.546972 TTTGTAACATATCACGAAGCAACA 57.453 33.333 0.00 0.00 0.00 3.33
81 82 6.735678 TTGTAACATATCACGAAGCAACAT 57.264 33.333 0.00 0.00 0.00 2.71
82 83 6.105657 TGTAACATATCACGAAGCAACATG 57.894 37.500 0.00 0.00 0.00 3.21
83 84 5.872070 TGTAACATATCACGAAGCAACATGA 59.128 36.000 0.00 0.00 0.00 3.07
84 85 5.878332 AACATATCACGAAGCAACATGAA 57.122 34.783 0.00 0.00 0.00 2.57
85 86 6.441093 AACATATCACGAAGCAACATGAAT 57.559 33.333 0.00 0.00 0.00 2.57
86 87 7.552458 AACATATCACGAAGCAACATGAATA 57.448 32.000 0.00 0.00 0.00 1.75
87 88 7.552458 ACATATCACGAAGCAACATGAATAA 57.448 32.000 0.00 0.00 0.00 1.40
88 89 7.409697 ACATATCACGAAGCAACATGAATAAC 58.590 34.615 0.00 0.00 0.00 1.89
89 90 5.878332 ATCACGAAGCAACATGAATAACA 57.122 34.783 0.00 0.00 0.00 2.41
90 91 5.878332 TCACGAAGCAACATGAATAACAT 57.122 34.783 0.00 0.00 40.17 2.71
91 92 5.868257 TCACGAAGCAACATGAATAACATC 58.132 37.500 0.00 0.00 37.07 3.06
92 93 4.725280 CACGAAGCAACATGAATAACATCG 59.275 41.667 0.00 3.29 37.07 3.84
93 94 4.201812 ACGAAGCAACATGAATAACATCGG 60.202 41.667 0.00 0.00 37.07 4.18
94 95 3.698029 AGCAACATGAATAACATCGGC 57.302 42.857 0.00 0.00 37.07 5.54
95 96 3.016031 AGCAACATGAATAACATCGGCA 58.984 40.909 0.00 0.00 37.07 5.69
96 97 3.443329 AGCAACATGAATAACATCGGCAA 59.557 39.130 0.00 0.00 37.07 4.52
97 98 4.098349 AGCAACATGAATAACATCGGCAAT 59.902 37.500 0.00 0.00 37.07 3.56
98 99 4.207635 GCAACATGAATAACATCGGCAATG 59.792 41.667 0.00 0.00 41.48 2.82
99 100 5.580661 CAACATGAATAACATCGGCAATGA 58.419 37.500 0.00 0.00 38.83 2.57
100 101 5.428496 ACATGAATAACATCGGCAATGAG 57.572 39.130 0.00 0.00 38.83 2.90
101 102 3.969117 TGAATAACATCGGCAATGAGC 57.031 42.857 5.42 0.00 44.65 4.26
102 103 3.884693 ATGAATAACATCGGCAATGAGCA 59.115 39.130 5.42 0.00 39.01 4.26
103 104 4.521639 ATGAATAACATCGGCAATGAGCAT 59.478 37.500 5.42 0.00 39.01 3.79
104 105 5.335426 ATGAATAACATCGGCAATGAGCATC 60.335 40.000 5.42 0.69 39.01 3.91
105 106 7.686366 ATGAATAACATCGGCAATGAGCATCA 61.686 38.462 5.42 5.24 42.49 3.07
106 107 9.078452 ATGAATAACATCGGCAATGAGCATCAA 62.078 37.037 5.42 0.00 41.82 2.57
118 119 4.522722 TGAGCATCAATGTGCAATTCAA 57.477 36.364 9.65 0.00 45.97 2.69
119 120 4.239304 TGAGCATCAATGTGCAATTCAAC 58.761 39.130 9.65 0.00 45.97 3.18
120 121 4.856561 TGAGCATCAATGTGCAATTCAACC 60.857 41.667 9.65 0.00 45.97 3.77
121 122 3.592059 GCATCAATGTGCAATTCAACCT 58.408 40.909 0.00 0.00 44.43 3.50
122 123 3.615496 GCATCAATGTGCAATTCAACCTC 59.385 43.478 0.00 0.00 44.43 3.85
123 124 4.619863 GCATCAATGTGCAATTCAACCTCT 60.620 41.667 0.00 0.00 44.43 3.69
124 125 5.475719 CATCAATGTGCAATTCAACCTCTT 58.524 37.500 0.00 0.00 0.00 2.85
125 126 4.873817 TCAATGTGCAATTCAACCTCTTG 58.126 39.130 0.00 0.00 0.00 3.02
126 127 4.583907 TCAATGTGCAATTCAACCTCTTGA 59.416 37.500 0.00 0.00 34.39 3.02
127 128 3.988379 TGTGCAATTCAACCTCTTGAC 57.012 42.857 0.00 0.00 36.06 3.18
128 129 2.622942 TGTGCAATTCAACCTCTTGACC 59.377 45.455 0.00 0.00 36.06 4.02
129 130 2.622942 GTGCAATTCAACCTCTTGACCA 59.377 45.455 0.00 0.00 36.06 4.02
130 131 3.256631 GTGCAATTCAACCTCTTGACCAT 59.743 43.478 0.00 0.00 36.06 3.55
131 132 3.507233 TGCAATTCAACCTCTTGACCATC 59.493 43.478 0.00 0.00 36.06 3.51
132 133 3.119352 GCAATTCAACCTCTTGACCATCC 60.119 47.826 0.00 0.00 36.06 3.51
133 134 4.081406 CAATTCAACCTCTTGACCATCCA 58.919 43.478 0.00 0.00 36.06 3.41
134 135 3.874383 TTCAACCTCTTGACCATCCAA 57.126 42.857 0.00 0.00 36.06 3.53
135 136 3.874383 TCAACCTCTTGACCATCCAAA 57.126 42.857 0.00 0.00 31.00 3.28
136 137 3.486383 TCAACCTCTTGACCATCCAAAC 58.514 45.455 0.00 0.00 31.00 2.93
137 138 3.117701 TCAACCTCTTGACCATCCAAACA 60.118 43.478 0.00 0.00 31.00 2.83
138 139 3.146104 ACCTCTTGACCATCCAAACAG 57.854 47.619 0.00 0.00 0.00 3.16
139 140 2.224867 ACCTCTTGACCATCCAAACAGG 60.225 50.000 0.00 0.00 34.58 4.00
155 156 1.694696 ACAGGAGTTGTTGGTCTCTCC 59.305 52.381 0.00 0.00 44.61 3.71
156 157 1.002544 CAGGAGTTGTTGGTCTCTCCC 59.997 57.143 6.46 0.00 45.16 4.30
157 158 0.325272 GGAGTTGTTGGTCTCTCCCC 59.675 60.000 0.00 0.00 40.14 4.81
158 159 0.325272 GAGTTGTTGGTCTCTCCCCC 59.675 60.000 0.00 0.00 34.77 5.40
200 201 3.264450 GTCTCTCTCCCCTTGAATTCCAA 59.736 47.826 2.27 0.00 0.00 3.53
236 237 4.397730 TGGACATCCAAACACCATAATTCG 59.602 41.667 0.00 0.00 44.35 3.34
239 240 3.722908 TCCAAACACCATAATTCGGGA 57.277 42.857 2.52 0.00 0.00 5.14
245 246 5.772825 AACACCATAATTCGGGATGAATG 57.227 39.130 2.52 0.00 46.65 2.67
248 249 5.065914 CACCATAATTCGGGATGAATGTCT 58.934 41.667 2.52 0.00 46.65 3.41
274 275 3.320826 TCAGTGTCGTGGAGAGATTTGAA 59.679 43.478 0.00 0.00 0.00 2.69
280 281 5.762711 TGTCGTGGAGAGATTTGAAATTTGA 59.237 36.000 0.00 0.00 0.00 2.69
302 303 6.751157 TGATATTGGAGCCAATGCAATTTAG 58.249 36.000 21.82 0.00 46.74 1.85
332 333 2.885135 TGTGCCATCCAAACAGATCT 57.115 45.000 0.00 0.00 0.00 2.75
349 350 9.979578 AAACAGATCTTAAGATATAGCAGACAG 57.020 33.333 17.94 3.48 34.37 3.51
350 351 8.932434 ACAGATCTTAAGATATAGCAGACAGA 57.068 34.615 17.94 0.00 34.37 3.41
356 357 9.503399 TCTTAAGATATAGCAGACAGATTACGA 57.497 33.333 0.00 0.00 0.00 3.43
357 358 9.549509 CTTAAGATATAGCAGACAGATTACGAC 57.450 37.037 0.00 0.00 0.00 4.34
358 359 7.753309 AAGATATAGCAGACAGATTACGACT 57.247 36.000 0.00 0.00 0.00 4.18
385 386 3.444742 GGCTCATGAACATCCAAACATCA 59.555 43.478 0.00 0.00 0.00 3.07
391 392 8.905660 TCATGAACATCCAAACATCAAAATTT 57.094 26.923 0.00 0.00 0.00 1.82
404 405 6.590068 ACATCAAAATTTGGGTTGAATGTCA 58.410 32.000 5.83 0.00 37.31 3.58
415 416 5.647658 TGGGTTGAATGTCAGTATCATTGTC 59.352 40.000 0.00 0.00 35.94 3.18
416 417 5.066505 GGGTTGAATGTCAGTATCATTGTCC 59.933 44.000 0.00 0.00 35.94 4.02
493 494 4.573607 CGAAACAAAGGCTAAGGTATACCC 59.426 45.833 18.65 2.77 36.42 3.69
496 497 5.727243 ACAAAGGCTAAGGTATACCCAAT 57.273 39.130 18.65 7.90 36.42 3.16
506 507 7.942894 GCTAAGGTATACCCAATGGATTAGTTT 59.057 37.037 18.65 4.07 36.42 2.66
514 515 5.656859 ACCCAATGGATTAGTTTTAGGCTTC 59.343 40.000 0.00 0.00 34.81 3.86
520 521 5.646360 TGGATTAGTTTTAGGCTTCGAAAGG 59.354 40.000 0.00 0.00 0.00 3.11
529 530 0.951558 GCTTCGAAAGGTGCTTCCAA 59.048 50.000 0.00 0.00 39.02 3.53
532 533 3.190535 GCTTCGAAAGGTGCTTCCAATTA 59.809 43.478 0.00 0.00 39.02 1.40
618 622 6.790282 AGAACAAAAGAGAAAGAAAGACTGC 58.210 36.000 0.00 0.00 0.00 4.40
642 646 1.876263 GTGCACCAAACCACGCAAC 60.876 57.895 5.22 0.00 35.87 4.17
693 697 0.512952 GGCAGCAAACTCACGTACTG 59.487 55.000 0.00 0.00 0.00 2.74
704 708 1.893137 TCACGTACTGGCATCTTCAGT 59.107 47.619 0.00 0.00 46.02 3.41
732 736 8.885494 TTTTTGCAAAAACTGTAGATAAGCAT 57.115 26.923 28.85 0.00 33.29 3.79
733 737 9.973450 TTTTTGCAAAAACTGTAGATAAGCATA 57.027 25.926 28.85 5.23 33.29 3.14
734 738 8.964420 TTTGCAAAAACTGTAGATAAGCATAC 57.036 30.769 10.02 0.00 0.00 2.39
735 739 7.680442 TGCAAAAACTGTAGATAAGCATACA 57.320 32.000 0.00 0.00 0.00 2.29
744 748 8.287439 CTGTAGATAAGCATACAGTAGGCTAT 57.713 38.462 19.73 12.95 46.20 2.97
780 784 1.818674 CATTACCTGCCCTGACAAACC 59.181 52.381 0.00 0.00 0.00 3.27
798 802 6.038356 ACAAACCAAGTTAGGTATCGATACG 58.962 40.000 25.21 13.53 42.25 3.06
812 816 1.264557 CGATACGAGCCAGACACCTAG 59.735 57.143 0.00 0.00 0.00 3.02
814 818 1.035932 TACGAGCCAGACACCTAGCC 61.036 60.000 0.00 0.00 0.00 3.93
815 819 2.055042 CGAGCCAGACACCTAGCCT 61.055 63.158 0.00 0.00 0.00 4.58
818 822 1.831736 GAGCCAGACACCTAGCCTAAA 59.168 52.381 0.00 0.00 0.00 1.85
819 823 1.834263 AGCCAGACACCTAGCCTAAAG 59.166 52.381 0.00 0.00 0.00 1.85
834 841 8.643324 CCTAGCCTAAAGTAATAGAAGTCACAT 58.357 37.037 0.00 0.00 0.00 3.21
837 844 7.982354 AGCCTAAAGTAATAGAAGTCACATGTC 59.018 37.037 0.00 0.00 0.00 3.06
838 845 7.764443 GCCTAAAGTAATAGAAGTCACATGTCA 59.236 37.037 0.00 0.00 0.00 3.58
839 846 9.088512 CCTAAAGTAATAGAAGTCACATGTCAC 57.911 37.037 0.00 0.00 0.00 3.67
840 847 7.907214 AAAGTAATAGAAGTCACATGTCACC 57.093 36.000 0.00 0.00 0.00 4.02
841 848 6.859112 AGTAATAGAAGTCACATGTCACCT 57.141 37.500 0.00 0.00 0.00 4.00
843 850 8.001881 AGTAATAGAAGTCACATGTCACCTAG 57.998 38.462 0.00 0.00 0.00 3.02
844 851 5.860941 ATAGAAGTCACATGTCACCTAGG 57.139 43.478 7.41 7.41 0.00 3.02
852 867 4.964897 TCACATGTCACCTAGGAATCATCT 59.035 41.667 17.98 1.66 0.00 2.90
865 880 8.043710 CCTAGGAATCATCTTAACACTTGTCTT 58.956 37.037 1.05 0.00 0.00 3.01
898 913 4.691216 ACGTCTTATTCTGGAAGCACTTTC 59.309 41.667 0.00 0.00 34.93 2.62
947 962 4.277174 TCAACAATCCGCACACAACTAATT 59.723 37.500 0.00 0.00 0.00 1.40
948 963 5.470437 TCAACAATCCGCACACAACTAATTA 59.530 36.000 0.00 0.00 0.00 1.40
966 981 4.864704 ATTAAACCACACCGCTCATTTT 57.135 36.364 0.00 0.00 0.00 1.82
968 983 3.915437 AAACCACACCGCTCATTTTAG 57.085 42.857 0.00 0.00 0.00 1.85
1055 1079 1.574702 GGGGTTACGCTTGTGAGTGC 61.575 60.000 0.00 0.00 36.87 4.40
1219 1243 9.268282 ACTTCAAACTAAGGATGAAGAGGTATA 57.732 33.333 20.48 0.00 0.00 1.47
1220 1244 9.535878 CTTCAAACTAAGGATGAAGAGGTATAC 57.464 37.037 12.36 0.00 0.00 1.47
1221 1245 8.019656 TCAAACTAAGGATGAAGAGGTATACC 57.980 38.462 14.54 14.54 0.00 2.73
1222 1246 6.651975 AACTAAGGATGAAGAGGTATACCG 57.348 41.667 16.31 0.00 42.08 4.02
1223 1247 5.703310 ACTAAGGATGAAGAGGTATACCGT 58.297 41.667 16.31 5.14 42.08 4.83
1224 1248 6.845908 ACTAAGGATGAAGAGGTATACCGTA 58.154 40.000 16.31 3.02 42.08 4.02
1225 1249 7.468496 ACTAAGGATGAAGAGGTATACCGTAT 58.532 38.462 16.31 6.19 42.08 3.06
1226 1250 8.609483 ACTAAGGATGAAGAGGTATACCGTATA 58.391 37.037 16.31 4.06 42.08 1.47
1300 1352 6.843676 CGTAATAATTCTACGTACCATCCG 57.156 41.667 10.42 0.00 37.85 4.18
1302 1354 7.518161 CGTAATAATTCTACGTACCATCCGTA 58.482 38.462 10.42 0.00 39.60 4.02
1315 1385 0.818938 ATCCGTACGTACCACATGCA 59.181 50.000 19.67 0.00 0.00 3.96
1317 1387 2.022934 TCCGTACGTACCACATGCATA 58.977 47.619 19.67 0.00 0.00 3.14
1583 1653 1.074623 CTCCCTGAGATGGAGGCCT 60.075 63.158 3.86 3.86 44.73 5.19
1709 1822 7.557358 TCCTGCAATATTCATTTCAGTGTATGT 59.443 33.333 0.00 0.00 34.66 2.29
1779 1930 3.449018 AGATTATGTTCGAGCTGGTGACT 59.551 43.478 0.00 0.00 0.00 3.41
1860 2011 2.289945 GCTTTTCTCAGGGCTCTTCTCA 60.290 50.000 0.00 0.00 0.00 3.27
1866 2017 0.179062 CAGGGCTCTTCTCATTCCCG 60.179 60.000 0.00 0.00 41.76 5.14
2073 2902 0.391793 GAGAGGTTAGGTGCACCAGC 60.392 60.000 36.39 25.53 36.67 4.85
2134 2963 1.817099 GCAGGGTGAAGAGCCATCG 60.817 63.158 0.00 0.00 42.81 3.84
2276 3109 1.463553 GCTCCAGGTTGGTTGGTTGG 61.464 60.000 0.00 0.00 39.03 3.77
2291 3124 5.248640 GTTGGTTGGATGATCTTTCTCTCA 58.751 41.667 0.00 0.00 0.00 3.27
2309 3958 8.507582 TTCTCTCATATGTAGTACTCCCTCTA 57.492 38.462 0.00 0.00 0.00 2.43
2314 3963 7.996788 TCATATGTAGTACTCCCTCTATTCCA 58.003 38.462 0.00 0.00 0.00 3.53
2315 3964 8.624670 TCATATGTAGTACTCCCTCTATTCCAT 58.375 37.037 0.00 0.00 0.00 3.41
2319 3968 8.651589 TGTAGTACTCCCTCTATTCCATAATG 57.348 38.462 0.00 0.00 0.00 1.90
2322 3971 8.887264 AGTACTCCCTCTATTCCATAATGTAG 57.113 38.462 0.00 0.00 0.00 2.74
2323 3972 8.457757 AGTACTCCCTCTATTCCATAATGTAGT 58.542 37.037 0.00 0.00 0.00 2.73
2324 3973 7.546250 ACTCCCTCTATTCCATAATGTAGTG 57.454 40.000 0.00 0.00 0.00 2.74
2326 3975 5.248477 TCCCTCTATTCCATAATGTAGTGCC 59.752 44.000 0.00 0.00 0.00 5.01
2328 3977 6.440647 CCCTCTATTCCATAATGTAGTGCCTA 59.559 42.308 0.00 0.00 0.00 3.93
2330 3979 9.201989 CCTCTATTCCATAATGTAGTGCCTATA 57.798 37.037 0.00 0.00 0.00 1.31
2342 3991 8.588290 ATGTAGTGCCTATAAATTTTTGTGGA 57.412 30.769 0.00 0.00 0.00 4.02
2350 3999 8.708742 GCCTATAAATTTTTGTGGAAGTCAAAC 58.291 33.333 0.00 0.00 35.05 2.93
2356 4005 3.518634 TTGTGGAAGTCAAACTTTGCC 57.481 42.857 0.00 0.00 38.80 4.52
2357 4006 2.451490 TGTGGAAGTCAAACTTTGCCA 58.549 42.857 0.00 0.00 38.80 4.92
2359 4008 3.186909 GTGGAAGTCAAACTTTGCCAAC 58.813 45.455 2.79 0.00 38.80 3.77
2360 4009 3.096092 TGGAAGTCAAACTTTGCCAACT 58.904 40.909 0.00 0.00 38.80 3.16
2362 4011 4.020662 TGGAAGTCAAACTTTGCCAACTTT 60.021 37.500 7.95 0.00 38.80 2.66
2363 4012 4.329801 GGAAGTCAAACTTTGCCAACTTTG 59.670 41.667 7.95 1.84 38.80 2.77
2365 4014 4.494484 AGTCAAACTTTGCCAACTTTGAC 58.506 39.130 21.64 21.64 46.84 3.18
2366 4015 3.616821 GTCAAACTTTGCCAACTTTGACC 59.383 43.478 19.93 9.30 43.35 4.02
2367 4016 3.259374 TCAAACTTTGCCAACTTTGACCA 59.741 39.130 5.68 0.00 29.66 4.02
2369 4018 3.525268 ACTTTGCCAACTTTGACCAAG 57.475 42.857 0.00 0.00 38.64 3.61
2371 4020 2.957491 TTGCCAACTTTGACCAAGTG 57.043 45.000 0.00 0.00 45.77 3.16
2372 4021 1.846007 TGCCAACTTTGACCAAGTGT 58.154 45.000 0.00 0.00 45.77 3.55
2373 4022 3.006112 TGCCAACTTTGACCAAGTGTA 57.994 42.857 0.00 0.00 45.77 2.90
2374 4023 3.561143 TGCCAACTTTGACCAAGTGTAT 58.439 40.909 0.00 0.00 45.77 2.29
2375 4024 4.720046 TGCCAACTTTGACCAAGTGTATA 58.280 39.130 0.00 0.00 45.77 1.47
2376 4025 4.759693 TGCCAACTTTGACCAAGTGTATAG 59.240 41.667 0.00 0.00 45.77 1.31
2377 4026 5.001232 GCCAACTTTGACCAAGTGTATAGA 58.999 41.667 0.00 0.00 45.77 1.98
2378 4027 5.122396 GCCAACTTTGACCAAGTGTATAGAG 59.878 44.000 0.00 0.00 45.77 2.43
2379 4028 6.464222 CCAACTTTGACCAAGTGTATAGAGA 58.536 40.000 0.00 0.00 45.77 3.10
2380 4029 6.934645 CCAACTTTGACCAAGTGTATAGAGAA 59.065 38.462 0.00 0.00 45.77 2.87
2381 4030 7.444183 CCAACTTTGACCAAGTGTATAGAGAAA 59.556 37.037 0.00 0.00 45.77 2.52
2382 4031 8.836413 CAACTTTGACCAAGTGTATAGAGAAAA 58.164 33.333 0.00 0.00 45.77 2.29
2383 4032 8.379457 ACTTTGACCAAGTGTATAGAGAAAAC 57.621 34.615 0.00 0.00 44.70 2.43
2384 4033 7.990886 ACTTTGACCAAGTGTATAGAGAAAACA 59.009 33.333 0.00 0.00 44.70 2.83
2385 4034 7.962964 TTGACCAAGTGTATAGAGAAAACAG 57.037 36.000 0.00 0.00 0.00 3.16
2386 4035 7.062749 TGACCAAGTGTATAGAGAAAACAGT 57.937 36.000 0.00 0.00 0.00 3.55
2387 4036 7.152645 TGACCAAGTGTATAGAGAAAACAGTC 58.847 38.462 0.00 0.00 0.00 3.51
2388 4037 7.015292 TGACCAAGTGTATAGAGAAAACAGTCT 59.985 37.037 0.00 0.00 0.00 3.24
2389 4038 8.418597 ACCAAGTGTATAGAGAAAACAGTCTA 57.581 34.615 0.00 0.00 0.00 2.59
2390 4039 8.305317 ACCAAGTGTATAGAGAAAACAGTCTAC 58.695 37.037 0.00 0.00 0.00 2.59
2391 4040 8.304596 CCAAGTGTATAGAGAAAACAGTCTACA 58.695 37.037 0.00 0.00 0.00 2.74
2392 4041 9.862371 CAAGTGTATAGAGAAAACAGTCTACAT 57.138 33.333 0.00 0.00 0.00 2.29
2394 4043 9.469097 AGTGTATAGAGAAAACAGTCTACATCT 57.531 33.333 0.00 0.00 0.00 2.90
2402 4051 9.303537 GAGAAAACAGTCTACATCTACAATACC 57.696 37.037 0.00 0.00 0.00 2.73
2403 4052 8.812972 AGAAAACAGTCTACATCTACAATACCA 58.187 33.333 0.00 0.00 0.00 3.25
2404 4053 9.431887 GAAAACAGTCTACATCTACAATACCAA 57.568 33.333 0.00 0.00 0.00 3.67
2405 4054 9.787435 AAAACAGTCTACATCTACAATACCAAA 57.213 29.630 0.00 0.00 0.00 3.28
2406 4055 8.773404 AACAGTCTACATCTACAATACCAAAC 57.227 34.615 0.00 0.00 0.00 2.93
2407 4056 7.903145 ACAGTCTACATCTACAATACCAAACA 58.097 34.615 0.00 0.00 0.00 2.83
2408 4057 8.540388 ACAGTCTACATCTACAATACCAAACAT 58.460 33.333 0.00 0.00 0.00 2.71
2409 4058 8.820933 CAGTCTACATCTACAATACCAAACATG 58.179 37.037 0.00 0.00 0.00 3.21
2410 4059 8.540388 AGTCTACATCTACAATACCAAACATGT 58.460 33.333 0.00 0.00 0.00 3.21
2411 4060 9.811995 GTCTACATCTACAATACCAAACATGTA 57.188 33.333 0.00 0.00 0.00 2.29
2412 4061 9.811995 TCTACATCTACAATACCAAACATGTAC 57.188 33.333 0.00 0.00 0.00 2.90
2413 4062 9.594478 CTACATCTACAATACCAAACATGTACA 57.406 33.333 0.00 0.00 0.00 2.90
2415 4064 9.461312 ACATCTACAATACCAAACATGTACATT 57.539 29.630 5.37 0.00 0.00 2.71
2416 4065 9.935682 CATCTACAATACCAAACATGTACATTC 57.064 33.333 5.37 0.00 0.00 2.67
2417 4066 9.905713 ATCTACAATACCAAACATGTACATTCT 57.094 29.630 5.37 0.00 0.00 2.40
2418 4067 9.161629 TCTACAATACCAAACATGTACATTCTG 57.838 33.333 5.37 0.00 0.00 3.02
2419 4068 7.994425 ACAATACCAAACATGTACATTCTGA 57.006 32.000 5.37 0.00 0.00 3.27
2420 4069 8.402798 ACAATACCAAACATGTACATTCTGAA 57.597 30.769 5.37 0.00 0.00 3.02
2421 4070 8.855110 ACAATACCAAACATGTACATTCTGAAA 58.145 29.630 5.37 0.00 0.00 2.69
2422 4071 9.689976 CAATACCAAACATGTACATTCTGAAAA 57.310 29.630 5.37 0.00 0.00 2.29
2450 4099 7.506328 AACTCATGATGTATCCAATGATGTG 57.494 36.000 0.00 0.00 32.18 3.21
2451 4100 5.472478 ACTCATGATGTATCCAATGATGTGC 59.528 40.000 0.00 0.00 32.18 4.57
2456 4105 6.508777 TGATGTATCCAATGATGTGCATTTG 58.491 36.000 0.00 0.00 44.68 2.32
2457 4106 5.265350 TGTATCCAATGATGTGCATTTGG 57.735 39.130 8.57 8.57 44.68 3.28
2458 4107 4.710865 TGTATCCAATGATGTGCATTTGGT 59.289 37.500 12.63 6.06 44.68 3.67
2460 4109 6.550481 TGTATCCAATGATGTGCATTTGGTAT 59.450 34.615 12.63 9.03 44.68 2.73
2462 4111 5.904941 TCCAATGATGTGCATTTGGTATTC 58.095 37.500 12.63 0.00 44.68 1.75
2468 4117 7.500720 TGATGTGCATTTGGTATTCTAGATG 57.499 36.000 0.00 0.00 0.00 2.90
2469 4118 7.056006 TGATGTGCATTTGGTATTCTAGATGT 58.944 34.615 0.00 0.00 0.00 3.06
2472 4121 6.765989 TGTGCATTTGGTATTCTAGATGTACC 59.234 38.462 20.29 20.29 38.65 3.34
2475 4124 8.148351 TGCATTTGGTATTCTAGATGTACCTAC 58.852 37.037 24.31 14.77 38.89 3.18
2517 4274 9.868277 TGATCAAAGTTTGTAATGTTTGACTTT 57.132 25.926 15.08 0.00 40.67 2.66
2520 4277 8.439286 TCAAAGTTTGTAATGTTTGACTTTTGC 58.561 29.630 15.08 0.00 35.75 3.68
2521 4278 7.897575 AAGTTTGTAATGTTTGACTTTTGCA 57.102 28.000 0.00 0.00 0.00 4.08
2522 4279 7.897575 AGTTTGTAATGTTTGACTTTTGCAA 57.102 28.000 0.00 0.00 0.00 4.08
2523 4280 8.316640 AGTTTGTAATGTTTGACTTTTGCAAA 57.683 26.923 8.05 8.05 33.22 3.68
2524 4281 8.778358 AGTTTGTAATGTTTGACTTTTGCAAAA 58.222 25.926 22.61 22.61 37.03 2.44
2525 4282 9.387123 GTTTGTAATGTTTGACTTTTGCAAAAA 57.613 25.926 23.92 8.29 37.03 1.94
2527 4284 9.766277 TTGTAATGTTTGACTTTTGCAAAAATC 57.234 25.926 22.90 22.90 37.03 2.17
2528 4285 9.160496 TGTAATGTTTGACTTTTGCAAAAATCT 57.840 25.926 27.69 13.35 37.03 2.40
2533 4290 9.474920 TGTTTGACTTTTGCAAAAATCTATAGG 57.525 29.630 27.69 15.71 37.03 2.57
2534 4291 8.435430 GTTTGACTTTTGCAAAAATCTATAGGC 58.565 33.333 27.69 16.81 37.03 3.93
2535 4292 7.225784 TGACTTTTGCAAAAATCTATAGGCA 57.774 32.000 27.69 18.92 0.00 4.75
2536 4293 7.090173 TGACTTTTGCAAAAATCTATAGGCAC 58.910 34.615 27.69 12.10 0.00 5.01
2537 4294 7.039784 TGACTTTTGCAAAAATCTATAGGCACT 60.040 33.333 27.69 1.15 46.37 4.40
2554 4314 3.131396 GCACTACATTATGGAACGGAGG 58.869 50.000 0.00 0.00 0.00 4.30
2561 4321 4.283722 ACATTATGGAACGGAGGGAGTATC 59.716 45.833 0.00 0.00 0.00 2.24
2581 4341 8.488308 AGTATCTATTACCCCGTCTGTATTTT 57.512 34.615 0.00 0.00 0.00 1.82
2691 4462 7.563556 GGATTAATAAACCCAGATGGAGGAAAA 59.436 37.037 0.00 0.00 37.39 2.29
2692 4463 7.954666 TTAATAAACCCAGATGGAGGAAAAG 57.045 36.000 0.00 0.00 37.39 2.27
2799 4611 1.523934 GACAGCTGCATGCAAAACAAC 59.476 47.619 22.88 8.12 45.94 3.32
2805 4617 5.287752 CAGCTGCATGCAAAACAACTAATAG 59.712 40.000 22.88 6.10 45.94 1.73
2844 4664 3.244112 ACTTTACACAGAAGGAGAACCGG 60.244 47.826 0.00 0.00 41.83 5.28
2864 4684 2.498167 GGCTATGCTCAATGGTCGAAT 58.502 47.619 0.00 0.00 0.00 3.34
3057 4939 5.761726 TGAGATCATTCGAATAAGCAATGCT 59.238 36.000 10.97 0.00 42.56 3.79
3159 5045 5.603395 TCCCTCCGTTACATAATTCATGGTA 59.397 40.000 0.00 0.00 39.13 3.25
3181 5069 5.834239 ATTAGTTCACTAAAACCACGACG 57.166 39.130 3.54 0.00 41.27 5.12
3218 5106 5.183969 GGAGGGAGTAGTAATTTGTTCCAC 58.816 45.833 0.00 0.00 0.00 4.02
3659 5571 4.142026 CCATGTCTTGGTGACCGAGTATAA 60.142 45.833 18.12 3.79 44.75 0.98
3721 5639 4.673580 GCTTTCGTCAGATTGTTCATGCAT 60.674 41.667 0.00 0.00 0.00 3.96
3981 5906 8.399529 TCTATGGACTACTAAGCATTATACCCT 58.600 37.037 0.00 0.00 0.00 4.34
3995 5920 1.447099 TACCCTTGTTACTTGGGGCA 58.553 50.000 15.09 3.14 44.97 5.36
4016 5941 4.092383 GCATTCATGTGAACTGGATTTTGC 59.908 41.667 0.00 0.00 36.80 3.68
4023 5948 7.546316 TCATGTGAACTGGATTTTGCATTATTG 59.454 33.333 0.00 0.00 0.00 1.90
4062 5987 3.404899 ACGGTGTTACCAATCGTCATTT 58.595 40.909 0.00 0.00 38.47 2.32
4169 6094 3.128415 CCATGGTGTGCATTTGTATTCGA 59.872 43.478 2.57 0.00 0.00 3.71
4178 6103 6.086222 GTGCATTTGTATTCGATTGAACTGT 58.914 36.000 0.00 0.00 36.81 3.55
4179 6104 6.032775 GTGCATTTGTATTCGATTGAACTGTG 59.967 38.462 0.00 0.00 36.81 3.66
4187 6112 9.161629 TGTATTCGATTGAACTGTGTTTGATAT 57.838 29.630 0.00 0.00 36.81 1.63
4192 6117 6.957635 CGATTGAACTGTGTTTGATATGACAG 59.042 38.462 0.00 0.00 41.37 3.51
4262 6187 7.667557 AGTCTATTTATCACCGCATTAGCTTA 58.332 34.615 0.00 0.00 39.10 3.09
4272 6197 5.119279 CACCGCATTAGCTTAGATGTATCAC 59.881 44.000 0.00 0.00 39.10 3.06
4301 6233 6.331369 TCTTGAAATAGCCAAAGTCCAAAG 57.669 37.500 0.00 0.00 0.00 2.77
4354 6286 2.023673 CAACTTGTGCTCTTGGACCAA 58.976 47.619 6.76 6.76 33.32 3.67
4380 6312 3.935203 ACATTAGAGTGATCTGGTTTGCG 59.065 43.478 0.00 0.00 0.00 4.85
4423 7129 8.267894 TGAGAGCCTAAACTTATCAAGCTAATT 58.732 33.333 0.00 0.00 0.00 1.40
4526 7233 0.900647 CTCCCTCGAAGTGTGACCCT 60.901 60.000 0.00 0.00 0.00 4.34
4527 7234 0.406750 TCCCTCGAAGTGTGACCCTA 59.593 55.000 0.00 0.00 0.00 3.53
4528 7235 1.006758 TCCCTCGAAGTGTGACCCTAT 59.993 52.381 0.00 0.00 0.00 2.57
4529 7236 1.137086 CCCTCGAAGTGTGACCCTATG 59.863 57.143 0.00 0.00 0.00 2.23
4530 7237 1.471676 CCTCGAAGTGTGACCCTATGC 60.472 57.143 0.00 0.00 0.00 3.14
4531 7238 0.535335 TCGAAGTGTGACCCTATGCC 59.465 55.000 0.00 0.00 0.00 4.40
4532 7239 0.249120 CGAAGTGTGACCCTATGCCA 59.751 55.000 0.00 0.00 0.00 4.92
4582 7296 7.121759 CCATAGAACCTTGAGATGATGTGTTTT 59.878 37.037 0.00 0.00 0.00 2.43
4668 7383 4.022603 TCTTGAGATCTCCTGAAGACCAG 58.977 47.826 20.03 2.75 39.64 4.00
4722 7440 3.822735 TGCTTCATGCTAAAGTGAGCTTT 59.177 39.130 0.00 0.00 43.27 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.346766 ACATCTTGTTCACTGTGCCA 57.653 45.000 2.12 0.00 0.00 4.92
1 2 2.618241 TCAACATCTTGTTCACTGTGCC 59.382 45.455 2.12 0.00 38.77 5.01
2 3 3.969117 TCAACATCTTGTTCACTGTGC 57.031 42.857 2.12 0.00 38.77 4.57
3 4 6.063640 TGAATCAACATCTTGTTCACTGTG 57.936 37.500 0.17 0.17 38.77 3.66
4 5 6.294342 CCATGAATCAACATCTTGTTCACTGT 60.294 38.462 0.00 0.00 38.77 3.55
5 6 6.090783 CCATGAATCAACATCTTGTTCACTG 58.909 40.000 0.00 0.00 38.77 3.66
6 7 5.184479 CCCATGAATCAACATCTTGTTCACT 59.816 40.000 0.00 0.00 38.77 3.41
7 8 5.404946 CCCATGAATCAACATCTTGTTCAC 58.595 41.667 0.00 0.00 38.77 3.18
8 9 4.463539 CCCCATGAATCAACATCTTGTTCA 59.536 41.667 0.00 0.00 38.77 3.18
9 10 4.706476 TCCCCATGAATCAACATCTTGTTC 59.294 41.667 0.00 0.00 38.77 3.18
10 11 4.676109 TCCCCATGAATCAACATCTTGTT 58.324 39.130 0.00 0.00 42.08 2.83
11 12 4.320546 TCCCCATGAATCAACATCTTGT 57.679 40.909 0.00 0.00 0.00 3.16
12 13 4.500887 GCATCCCCATGAATCAACATCTTG 60.501 45.833 0.00 0.00 30.57 3.02
13 14 3.640029 GCATCCCCATGAATCAACATCTT 59.360 43.478 0.00 0.00 30.57 2.40
14 15 3.228453 GCATCCCCATGAATCAACATCT 58.772 45.455 0.00 0.00 30.57 2.90
15 16 2.298163 GGCATCCCCATGAATCAACATC 59.702 50.000 0.00 0.00 30.57 3.06
16 17 2.322658 GGCATCCCCATGAATCAACAT 58.677 47.619 0.00 0.00 30.57 2.71
17 18 1.006878 TGGCATCCCCATGAATCAACA 59.993 47.619 0.00 0.00 39.18 3.33
18 19 1.779221 TGGCATCCCCATGAATCAAC 58.221 50.000 0.00 0.00 39.18 3.18
28 29 2.893489 GGTGAGATTTAATGGCATCCCC 59.107 50.000 0.00 0.00 0.00 4.81
29 30 3.823304 GAGGTGAGATTTAATGGCATCCC 59.177 47.826 0.00 0.00 0.00 3.85
30 31 3.499918 CGAGGTGAGATTTAATGGCATCC 59.500 47.826 0.00 0.00 0.00 3.51
31 32 3.499918 CCGAGGTGAGATTTAATGGCATC 59.500 47.826 0.00 0.00 0.00 3.91
32 33 3.136443 TCCGAGGTGAGATTTAATGGCAT 59.864 43.478 0.00 0.00 0.00 4.40
33 34 2.503765 TCCGAGGTGAGATTTAATGGCA 59.496 45.455 0.00 0.00 0.00 4.92
34 35 3.194005 TCCGAGGTGAGATTTAATGGC 57.806 47.619 0.00 0.00 0.00 4.40
35 36 7.445402 ACAAATATCCGAGGTGAGATTTAATGG 59.555 37.037 0.00 0.00 34.79 3.16
36 37 8.383318 ACAAATATCCGAGGTGAGATTTAATG 57.617 34.615 0.00 0.00 34.79 1.90
38 39 9.321562 GTTACAAATATCCGAGGTGAGATTTAA 57.678 33.333 0.00 0.00 34.79 1.52
39 40 8.479689 TGTTACAAATATCCGAGGTGAGATTTA 58.520 33.333 0.00 0.00 34.79 1.40
40 41 7.335627 TGTTACAAATATCCGAGGTGAGATTT 58.664 34.615 0.00 0.00 36.80 2.17
41 42 6.884832 TGTTACAAATATCCGAGGTGAGATT 58.115 36.000 0.00 0.00 0.00 2.40
42 43 6.479972 TGTTACAAATATCCGAGGTGAGAT 57.520 37.500 0.00 0.00 0.00 2.75
43 44 5.925506 TGTTACAAATATCCGAGGTGAGA 57.074 39.130 0.00 0.00 0.00 3.27
44 45 8.088365 TGATATGTTACAAATATCCGAGGTGAG 58.912 37.037 4.21 0.00 36.55 3.51
45 46 7.870954 GTGATATGTTACAAATATCCGAGGTGA 59.129 37.037 4.21 0.00 36.55 4.02
46 47 7.148804 CGTGATATGTTACAAATATCCGAGGTG 60.149 40.741 4.21 0.00 36.55 4.00
47 48 6.866770 CGTGATATGTTACAAATATCCGAGGT 59.133 38.462 4.21 0.00 36.55 3.85
48 49 7.088272 TCGTGATATGTTACAAATATCCGAGG 58.912 38.462 11.61 0.00 36.24 4.63
49 50 8.515473 TTCGTGATATGTTACAAATATCCGAG 57.485 34.615 13.54 4.42 38.88 4.63
50 51 7.115805 GCTTCGTGATATGTTACAAATATCCGA 59.884 37.037 11.61 11.61 37.61 4.55
51 52 7.095816 TGCTTCGTGATATGTTACAAATATCCG 60.096 37.037 4.21 6.88 36.55 4.18
52 53 8.083462 TGCTTCGTGATATGTTACAAATATCC 57.917 34.615 4.21 0.00 36.55 2.59
53 54 9.370126 GTTGCTTCGTGATATGTTACAAATATC 57.630 33.333 0.00 0.00 37.47 1.63
54 55 8.888716 TGTTGCTTCGTGATATGTTACAAATAT 58.111 29.630 0.00 0.00 0.00 1.28
55 56 8.257830 TGTTGCTTCGTGATATGTTACAAATA 57.742 30.769 0.00 0.00 0.00 1.40
56 57 7.139896 TGTTGCTTCGTGATATGTTACAAAT 57.860 32.000 0.00 0.00 0.00 2.32
57 58 6.546972 TGTTGCTTCGTGATATGTTACAAA 57.453 33.333 0.00 0.00 0.00 2.83
58 59 6.370166 TCATGTTGCTTCGTGATATGTTACAA 59.630 34.615 0.00 0.00 0.00 2.41
59 60 5.872070 TCATGTTGCTTCGTGATATGTTACA 59.128 36.000 0.00 0.00 0.00 2.41
60 61 6.344572 TCATGTTGCTTCGTGATATGTTAC 57.655 37.500 0.00 0.00 0.00 2.50
61 62 6.976636 TTCATGTTGCTTCGTGATATGTTA 57.023 33.333 0.00 0.00 34.05 2.41
62 63 5.878332 TTCATGTTGCTTCGTGATATGTT 57.122 34.783 0.00 0.00 34.05 2.71
63 64 7.065683 TGTTATTCATGTTGCTTCGTGATATGT 59.934 33.333 0.00 0.00 34.05 2.29
64 65 7.408910 TGTTATTCATGTTGCTTCGTGATATG 58.591 34.615 0.00 0.00 34.05 1.78
65 66 7.552458 TGTTATTCATGTTGCTTCGTGATAT 57.448 32.000 0.00 5.04 34.05 1.63
66 67 6.976636 TGTTATTCATGTTGCTTCGTGATA 57.023 33.333 0.00 0.00 34.05 2.15
67 68 5.878332 TGTTATTCATGTTGCTTCGTGAT 57.122 34.783 0.00 0.62 34.05 3.06
68 69 5.445806 CGATGTTATTCATGTTGCTTCGTGA 60.446 40.000 0.00 0.79 36.83 4.35
69 70 4.725280 CGATGTTATTCATGTTGCTTCGTG 59.275 41.667 0.00 0.00 36.83 4.35
70 71 4.201812 CCGATGTTATTCATGTTGCTTCGT 60.202 41.667 0.00 0.00 36.83 3.85
71 72 4.274069 CCGATGTTATTCATGTTGCTTCG 58.726 43.478 0.00 0.00 36.83 3.79
72 73 4.037690 GCCGATGTTATTCATGTTGCTTC 58.962 43.478 0.00 0.00 36.83 3.86
73 74 3.443329 TGCCGATGTTATTCATGTTGCTT 59.557 39.130 0.00 0.00 36.83 3.91
74 75 3.016031 TGCCGATGTTATTCATGTTGCT 58.984 40.909 0.00 0.00 36.83 3.91
75 76 3.419264 TGCCGATGTTATTCATGTTGC 57.581 42.857 0.00 0.00 36.83 4.17
76 77 5.580661 TCATTGCCGATGTTATTCATGTTG 58.419 37.500 0.00 0.00 36.83 3.33
77 78 5.734220 GCTCATTGCCGATGTTATTCATGTT 60.734 40.000 0.00 0.00 37.06 2.71
78 79 4.261322 GCTCATTGCCGATGTTATTCATGT 60.261 41.667 0.00 0.00 37.06 3.21
79 80 4.224433 GCTCATTGCCGATGTTATTCATG 58.776 43.478 0.00 0.00 37.06 3.07
80 81 3.884693 TGCTCATTGCCGATGTTATTCAT 59.115 39.130 0.00 0.00 42.00 2.57
81 82 3.277715 TGCTCATTGCCGATGTTATTCA 58.722 40.909 0.00 0.00 42.00 2.57
82 83 3.969117 TGCTCATTGCCGATGTTATTC 57.031 42.857 0.00 0.00 42.00 1.75
83 84 3.884693 TGATGCTCATTGCCGATGTTATT 59.115 39.130 0.00 0.00 42.00 1.40
84 85 3.479489 TGATGCTCATTGCCGATGTTAT 58.521 40.909 0.00 0.00 42.00 1.89
85 86 2.916640 TGATGCTCATTGCCGATGTTA 58.083 42.857 0.00 0.00 42.00 2.41
86 87 1.753930 TGATGCTCATTGCCGATGTT 58.246 45.000 0.00 0.00 42.00 2.71
87 88 1.753930 TTGATGCTCATTGCCGATGT 58.246 45.000 0.00 0.00 42.00 3.06
88 89 2.034179 ACATTGATGCTCATTGCCGATG 59.966 45.455 0.00 0.00 42.00 3.84
89 90 2.034179 CACATTGATGCTCATTGCCGAT 59.966 45.455 0.00 0.00 42.00 4.18
90 91 1.402613 CACATTGATGCTCATTGCCGA 59.597 47.619 0.00 0.00 42.00 5.54
91 92 1.835121 CACATTGATGCTCATTGCCG 58.165 50.000 0.00 0.00 42.00 5.69
92 93 1.134936 TGCACATTGATGCTCATTGCC 60.135 47.619 10.93 2.61 46.28 4.52
93 94 2.287393 TGCACATTGATGCTCATTGC 57.713 45.000 10.93 0.00 46.28 3.56
94 95 4.867608 TGAATTGCACATTGATGCTCATTG 59.132 37.500 10.93 6.54 46.28 2.82
95 96 5.079689 TGAATTGCACATTGATGCTCATT 57.920 34.783 10.93 9.26 46.28 2.57
96 97 4.729227 TGAATTGCACATTGATGCTCAT 57.271 36.364 10.93 0.00 46.28 2.90
97 98 4.239304 GTTGAATTGCACATTGATGCTCA 58.761 39.130 10.93 5.64 46.28 4.26
98 99 3.615496 GGTTGAATTGCACATTGATGCTC 59.385 43.478 10.93 3.76 46.28 4.26
99 100 3.259876 AGGTTGAATTGCACATTGATGCT 59.740 39.130 10.93 0.00 46.28 3.79
100 101 3.592059 AGGTTGAATTGCACATTGATGC 58.408 40.909 0.00 0.00 46.32 3.91
101 102 5.068234 AGAGGTTGAATTGCACATTGATG 57.932 39.130 0.00 0.00 0.00 3.07
102 103 5.244402 TCAAGAGGTTGAATTGCACATTGAT 59.756 36.000 0.00 0.00 39.85 2.57
103 104 4.583907 TCAAGAGGTTGAATTGCACATTGA 59.416 37.500 0.00 0.00 39.85 2.57
104 105 4.682860 GTCAAGAGGTTGAATTGCACATTG 59.317 41.667 0.00 0.00 44.44 2.82
105 106 4.262164 GGTCAAGAGGTTGAATTGCACATT 60.262 41.667 0.00 0.00 44.44 2.71
106 107 3.256631 GGTCAAGAGGTTGAATTGCACAT 59.743 43.478 0.00 0.00 44.44 3.21
107 108 2.622942 GGTCAAGAGGTTGAATTGCACA 59.377 45.455 0.00 0.00 44.44 4.57
108 109 2.622942 TGGTCAAGAGGTTGAATTGCAC 59.377 45.455 0.00 0.00 44.44 4.57
109 110 2.942804 TGGTCAAGAGGTTGAATTGCA 58.057 42.857 0.00 0.00 44.44 4.08
110 111 3.119352 GGATGGTCAAGAGGTTGAATTGC 60.119 47.826 0.00 0.00 44.44 3.56
111 112 4.081406 TGGATGGTCAAGAGGTTGAATTG 58.919 43.478 0.00 0.00 44.44 2.32
112 113 4.387026 TGGATGGTCAAGAGGTTGAATT 57.613 40.909 0.00 0.00 44.44 2.17
113 114 4.387026 TTGGATGGTCAAGAGGTTGAAT 57.613 40.909 0.00 0.00 44.44 2.57
114 115 3.874383 TTGGATGGTCAAGAGGTTGAA 57.126 42.857 0.00 0.00 44.44 2.69
115 116 3.117701 TGTTTGGATGGTCAAGAGGTTGA 60.118 43.478 0.00 0.00 40.55 3.18
116 117 3.221771 TGTTTGGATGGTCAAGAGGTTG 58.778 45.455 0.00 0.00 34.67 3.77
117 118 3.490348 CTGTTTGGATGGTCAAGAGGTT 58.510 45.455 0.00 0.00 0.00 3.50
118 119 2.224867 CCTGTTTGGATGGTCAAGAGGT 60.225 50.000 0.00 0.00 38.35 3.85
119 120 2.040278 TCCTGTTTGGATGGTCAAGAGG 59.960 50.000 0.00 0.00 40.56 3.69
120 121 3.244700 ACTCCTGTTTGGATGGTCAAGAG 60.245 47.826 0.00 0.00 45.16 2.85
121 122 2.711009 ACTCCTGTTTGGATGGTCAAGA 59.289 45.455 0.00 0.00 45.16 3.02
122 123 3.146104 ACTCCTGTTTGGATGGTCAAG 57.854 47.619 0.00 0.00 45.16 3.02
123 124 3.221771 CAACTCCTGTTTGGATGGTCAA 58.778 45.455 0.00 0.00 45.16 3.18
124 125 2.174639 ACAACTCCTGTTTGGATGGTCA 59.825 45.455 0.00 0.00 45.16 4.02
125 126 2.863809 ACAACTCCTGTTTGGATGGTC 58.136 47.619 0.00 0.00 45.16 4.02
126 127 2.958355 CAACAACTCCTGTTTGGATGGT 59.042 45.455 0.00 0.00 46.49 3.55
127 128 2.297033 CCAACAACTCCTGTTTGGATGG 59.703 50.000 0.00 0.00 46.49 3.51
128 129 2.958355 ACCAACAACTCCTGTTTGGATG 59.042 45.455 6.22 0.00 46.49 3.51
129 130 3.117512 AGACCAACAACTCCTGTTTGGAT 60.118 43.478 6.22 0.00 46.49 3.41
130 131 2.241176 AGACCAACAACTCCTGTTTGGA 59.759 45.455 6.22 0.00 46.49 3.53
131 132 2.618709 GAGACCAACAACTCCTGTTTGG 59.381 50.000 0.00 0.00 46.49 3.28
132 133 3.545703 AGAGACCAACAACTCCTGTTTG 58.454 45.455 0.00 0.00 46.49 2.93
133 134 3.433740 GGAGAGACCAACAACTCCTGTTT 60.434 47.826 0.00 0.00 46.49 2.83
135 136 1.694696 GGAGAGACCAACAACTCCTGT 59.305 52.381 0.00 0.00 43.64 4.00
136 137 1.002544 GGGAGAGACCAACAACTCCTG 59.997 57.143 0.00 0.00 45.52 3.86
137 138 1.353091 GGGAGAGACCAACAACTCCT 58.647 55.000 0.00 0.00 45.52 3.69
138 139 0.325272 GGGGAGAGACCAACAACTCC 59.675 60.000 0.00 0.00 45.50 3.85
139 140 0.325272 GGGGGAGAGACCAACAACTC 59.675 60.000 0.00 0.00 41.20 3.01
140 141 2.464582 GGGGGAGAGACCAACAACT 58.535 57.895 0.00 0.00 41.20 3.16
155 156 1.133482 ACAACTCCTGTTTCAAGGGGG 60.133 52.381 0.00 0.00 42.77 5.40
156 157 2.362077 CAACAACTCCTGTTTCAAGGGG 59.638 50.000 0.00 0.00 46.49 4.79
157 158 2.362077 CCAACAACTCCTGTTTCAAGGG 59.638 50.000 0.00 0.00 46.49 3.95
158 159 3.023832 ACCAACAACTCCTGTTTCAAGG 58.976 45.455 0.00 0.00 46.49 3.61
159 160 3.947834 AGACCAACAACTCCTGTTTCAAG 59.052 43.478 0.00 0.00 46.49 3.02
160 161 3.945285 GAGACCAACAACTCCTGTTTCAA 59.055 43.478 0.00 0.00 46.49 2.69
161 162 3.199946 AGAGACCAACAACTCCTGTTTCA 59.800 43.478 0.00 0.00 46.49 2.69
162 163 3.809905 AGAGACCAACAACTCCTGTTTC 58.190 45.455 0.00 0.00 46.49 2.78
172 173 1.699634 CAAGGGGAGAGAGACCAACAA 59.300 52.381 0.00 0.00 0.00 2.83
228 229 7.603784 TGATACAGACATTCATCCCGAATTATG 59.396 37.037 0.00 0.00 41.83 1.90
236 237 5.028549 ACACTGATACAGACATTCATCCC 57.971 43.478 5.76 0.00 35.18 3.85
239 240 5.105063 CACGACACTGATACAGACATTCAT 58.895 41.667 5.76 0.00 35.18 2.57
245 246 2.747989 TCTCCACGACACTGATACAGAC 59.252 50.000 5.76 0.00 35.18 3.51
248 249 3.067684 TCTCTCCACGACACTGATACA 57.932 47.619 0.00 0.00 0.00 2.29
274 275 5.617528 TGCATTGGCTCCAATATCAAATT 57.382 34.783 13.29 0.00 43.92 1.82
280 281 5.012354 CCCTAAATTGCATTGGCTCCAATAT 59.988 40.000 13.29 2.26 43.92 1.28
332 333 9.286170 AGTCGTAATCTGTCTGCTATATCTTAA 57.714 33.333 0.00 0.00 0.00 1.85
349 350 6.312918 TGTTCATGAGCCTAAAAGTCGTAATC 59.687 38.462 7.13 0.00 0.00 1.75
350 351 6.170506 TGTTCATGAGCCTAAAAGTCGTAAT 58.829 36.000 7.13 0.00 0.00 1.89
355 356 4.943705 TGGATGTTCATGAGCCTAAAAGTC 59.056 41.667 7.13 0.00 0.00 3.01
356 357 4.922206 TGGATGTTCATGAGCCTAAAAGT 58.078 39.130 7.13 0.00 0.00 2.66
357 358 5.902613 TTGGATGTTCATGAGCCTAAAAG 57.097 39.130 7.13 0.00 0.00 2.27
358 359 5.538053 TGTTTGGATGTTCATGAGCCTAAAA 59.462 36.000 7.13 0.74 0.00 1.52
385 386 7.961351 TGATACTGACATTCAACCCAAATTTT 58.039 30.769 0.00 0.00 0.00 1.82
391 392 5.569355 ACAATGATACTGACATTCAACCCA 58.431 37.500 0.00 0.00 36.07 4.51
404 405 6.385176 TCAAATCTCTCCAGGACAATGATACT 59.615 38.462 0.00 0.00 0.00 2.12
415 416 5.002516 GCTCCAATATCAAATCTCTCCAGG 58.997 45.833 0.00 0.00 0.00 4.45
416 417 5.002516 GGCTCCAATATCAAATCTCTCCAG 58.997 45.833 0.00 0.00 0.00 3.86
493 494 6.677781 TCGAAGCCTAAAACTAATCCATTG 57.322 37.500 0.00 0.00 0.00 2.82
496 497 5.646360 CCTTTCGAAGCCTAAAACTAATCCA 59.354 40.000 0.00 0.00 0.00 3.41
506 507 2.423577 GAAGCACCTTTCGAAGCCTAA 58.576 47.619 0.00 0.00 0.00 2.69
514 515 5.873179 TTACTAATTGGAAGCACCTTTCG 57.127 39.130 0.00 0.00 39.86 3.46
596 600 5.163509 GGGCAGTCTTTCTTTCTCTTTTGTT 60.164 40.000 0.00 0.00 0.00 2.83
603 607 4.633565 CACTATGGGCAGTCTTTCTTTCTC 59.366 45.833 0.00 0.00 0.00 2.87
610 614 1.614317 GGTGCACTATGGGCAGTCTTT 60.614 52.381 17.98 0.00 42.85 2.52
618 622 0.887933 GTGGTTTGGTGCACTATGGG 59.112 55.000 17.98 0.00 0.00 4.00
642 646 3.495670 TCGGTGTTTGTCTTGTTTTGG 57.504 42.857 0.00 0.00 0.00 3.28
710 714 8.105097 TGTATGCTTATCTACAGTTTTTGCAA 57.895 30.769 0.00 0.00 0.00 4.08
711 715 7.680442 TGTATGCTTATCTACAGTTTTTGCA 57.320 32.000 0.00 0.00 0.00 4.08
719 723 6.582677 AGCCTACTGTATGCTTATCTACAG 57.417 41.667 11.19 7.89 46.61 2.74
720 724 9.922477 ATATAGCCTACTGTATGCTTATCTACA 57.078 33.333 20.08 3.95 36.57 2.74
728 732 9.357161 GGAGTATTATATAGCCTACTGTATGCT 57.643 37.037 19.10 19.10 39.10 3.79
729 733 9.132923 TGGAGTATTATATAGCCTACTGTATGC 57.867 37.037 6.95 6.95 32.91 3.14
735 739 9.784376 TGGAAATGGAGTATTATATAGCCTACT 57.216 33.333 0.00 2.91 0.00 2.57
744 748 8.107095 GGCAGGTAATGGAAATGGAGTATTATA 58.893 37.037 0.00 0.00 0.00 0.98
780 784 4.023450 TGGCTCGTATCGATACCTAACTTG 60.023 45.833 25.89 12.62 34.61 3.16
798 802 1.486211 TTAGGCTAGGTGTCTGGCTC 58.514 55.000 0.00 0.00 45.37 4.70
812 816 7.764443 TGACATGTGACTTCTATTACTTTAGGC 59.236 37.037 1.15 0.00 0.00 3.93
814 818 9.088512 GGTGACATGTGACTTCTATTACTTTAG 57.911 37.037 15.23 0.00 0.00 1.85
815 819 8.812972 AGGTGACATGTGACTTCTATTACTTTA 58.187 33.333 15.23 0.00 0.00 1.85
818 822 6.859112 AGGTGACATGTGACTTCTATTACT 57.141 37.500 15.23 0.00 0.00 2.24
819 823 7.068348 TCCTAGGTGACATGTGACTTCTATTAC 59.932 40.741 15.23 0.00 0.00 1.89
834 841 6.440647 AGTGTTAAGATGATTCCTAGGTGACA 59.559 38.462 9.08 7.74 0.00 3.58
837 844 7.106239 ACAAGTGTTAAGATGATTCCTAGGTG 58.894 38.462 9.08 0.00 0.00 4.00
838 845 7.181125 AGACAAGTGTTAAGATGATTCCTAGGT 59.819 37.037 9.08 0.00 0.00 3.08
839 846 7.560368 AGACAAGTGTTAAGATGATTCCTAGG 58.440 38.462 0.82 0.82 0.00 3.02
840 847 9.442047 AAAGACAAGTGTTAAGATGATTCCTAG 57.558 33.333 0.00 0.00 0.00 3.02
870 885 6.152323 AGTGCTTCCAGAATAAGACGTACTTA 59.848 38.462 9.04 9.04 43.89 2.24
871 886 5.047235 AGTGCTTCCAGAATAAGACGTACTT 60.047 40.000 0.00 0.00 42.04 2.24
872 887 4.463186 AGTGCTTCCAGAATAAGACGTACT 59.537 41.667 0.00 0.00 0.00 2.73
873 888 4.745649 AGTGCTTCCAGAATAAGACGTAC 58.254 43.478 0.00 0.00 0.00 3.67
875 890 3.963428 AGTGCTTCCAGAATAAGACGT 57.037 42.857 0.00 0.00 0.00 4.34
888 903 9.712305 TTAGATGCTTATATAGGAAAGTGCTTC 57.288 33.333 0.00 0.00 0.00 3.86
890 905 9.717942 CTTTAGATGCTTATATAGGAAAGTGCT 57.282 33.333 0.00 0.00 0.00 4.40
919 934 3.261580 TGTGTGCGGATTGTTGATAGAG 58.738 45.455 0.00 0.00 0.00 2.43
923 938 2.229792 AGTTGTGTGCGGATTGTTGAT 58.770 42.857 0.00 0.00 0.00 2.57
924 939 1.674359 AGTTGTGTGCGGATTGTTGA 58.326 45.000 0.00 0.00 0.00 3.18
947 962 4.391155 ACTAAAATGAGCGGTGTGGTTTA 58.609 39.130 0.00 0.00 0.00 2.01
948 963 3.219281 ACTAAAATGAGCGGTGTGGTTT 58.781 40.909 0.00 0.00 0.00 3.27
1018 1042 0.249238 CCACAGAGAGCTACGCATCC 60.249 60.000 0.00 0.00 0.00 3.51
1055 1079 4.587262 TGTATACCCAGTGTACTAGCCATG 59.413 45.833 0.00 0.00 32.62 3.66
1291 1343 1.742831 TGTGGTACGTACGGATGGTAC 59.257 52.381 21.06 11.92 46.54 3.34
1293 1345 1.135527 CATGTGGTACGTACGGATGGT 59.864 52.381 21.06 0.00 0.00 3.55
1295 1347 1.205657 GCATGTGGTACGTACGGATG 58.794 55.000 21.06 18.81 0.00 3.51
1297 1349 0.818938 ATGCATGTGGTACGTACGGA 59.181 50.000 21.06 8.59 0.00 4.69
1298 1350 2.495409 TATGCATGTGGTACGTACGG 57.505 50.000 21.06 7.46 0.00 4.02
1299 1351 4.318475 CCAAATATGCATGTGGTACGTACG 60.318 45.833 18.98 15.01 35.08 3.67
1300 1352 4.024387 CCCAAATATGCATGTGGTACGTAC 60.024 45.833 17.56 17.56 37.81 3.67
1302 1354 2.948979 CCCAAATATGCATGTGGTACGT 59.051 45.455 10.16 0.00 37.81 3.57
1305 1357 2.957680 CTGCCCAAATATGCATGTGGTA 59.042 45.455 10.16 0.00 37.81 3.25
1306 1358 1.758280 CTGCCCAAATATGCATGTGGT 59.242 47.619 10.16 0.00 37.81 4.16
1315 1385 2.224769 CGGACCATACCTGCCCAAATAT 60.225 50.000 0.00 0.00 0.00 1.28
1317 1387 0.106719 CGGACCATACCTGCCCAAAT 60.107 55.000 0.00 0.00 0.00 2.32
1709 1822 7.468141 AGCTAGCACTTGCATGTATACTATA 57.532 36.000 18.83 0.00 45.16 1.31
1712 1825 4.679373 AGCTAGCACTTGCATGTATACT 57.321 40.909 18.83 6.19 45.16 2.12
1779 1930 2.123589 TCGAATCCCAGGCATTTCCTA 58.876 47.619 0.00 0.00 45.52 2.94
1794 1945 3.347216 CCTGGACTTTGTGGAATCGAAT 58.653 45.455 0.00 0.00 0.00 3.34
1860 2011 4.227527 GTCCCAGGGAAATATATCGGGAAT 59.772 45.833 10.89 0.00 42.71 3.01
1866 2017 4.993705 TGGTGTCCCAGGGAAATATATC 57.006 45.455 10.89 0.00 35.17 1.63
1943 2636 6.735678 TTGAAGGAAAACCAAAAAGAAAGC 57.264 33.333 0.00 0.00 0.00 3.51
1949 2642 8.798859 TTGATTGATTGAAGGAAAACCAAAAA 57.201 26.923 0.00 0.00 0.00 1.94
1960 2653 3.181489 GCCAGCTCTTGATTGATTGAAGG 60.181 47.826 0.00 0.00 0.00 3.46
2073 2902 0.721718 GAGGTCGCCATGTTTCTTCG 59.278 55.000 0.00 0.00 0.00 3.79
2322 3971 7.375053 TGACTTCCACAAAAATTTATAGGCAC 58.625 34.615 0.00 0.00 0.00 5.01
2323 3972 7.531857 TGACTTCCACAAAAATTTATAGGCA 57.468 32.000 0.00 0.00 0.00 4.75
2324 3973 8.708742 GTTTGACTTCCACAAAAATTTATAGGC 58.291 33.333 0.00 0.00 38.63 3.93
2330 3979 7.304735 GCAAAGTTTGACTTCCACAAAAATTT 58.695 30.769 19.82 0.00 37.47 1.82
2334 3983 4.249661 GGCAAAGTTTGACTTCCACAAAA 58.750 39.130 19.82 0.00 37.47 2.44
2338 3987 3.119137 AGTTGGCAAAGTTTGACTTCCAC 60.119 43.478 21.83 12.78 37.47 4.02
2339 3988 3.096092 AGTTGGCAAAGTTTGACTTCCA 58.904 40.909 21.83 14.49 37.47 3.53
2340 3989 3.801114 AGTTGGCAAAGTTTGACTTCC 57.199 42.857 21.83 12.17 37.47 3.46
2359 4008 8.378172 TGTTTTCTCTATACACTTGGTCAAAG 57.622 34.615 0.00 0.00 42.07 2.77
2360 4009 7.990886 ACTGTTTTCTCTATACACTTGGTCAAA 59.009 33.333 0.00 0.00 0.00 2.69
2362 4011 7.015292 AGACTGTTTTCTCTATACACTTGGTCA 59.985 37.037 0.00 0.00 0.00 4.02
2363 4012 7.379750 AGACTGTTTTCTCTATACACTTGGTC 58.620 38.462 0.00 0.00 0.00 4.02
2365 4014 8.304596 TGTAGACTGTTTTCTCTATACACTTGG 58.695 37.037 0.00 0.00 0.00 3.61
2366 4015 9.862371 ATGTAGACTGTTTTCTCTATACACTTG 57.138 33.333 0.00 0.00 0.00 3.16
2376 4025 9.303537 GGTATTGTAGATGTAGACTGTTTTCTC 57.696 37.037 0.00 0.00 0.00 2.87
2377 4026 8.812972 TGGTATTGTAGATGTAGACTGTTTTCT 58.187 33.333 0.00 0.00 0.00 2.52
2378 4027 8.997621 TGGTATTGTAGATGTAGACTGTTTTC 57.002 34.615 0.00 0.00 0.00 2.29
2379 4028 9.787435 TTTGGTATTGTAGATGTAGACTGTTTT 57.213 29.630 0.00 0.00 0.00 2.43
2380 4029 9.216117 GTTTGGTATTGTAGATGTAGACTGTTT 57.784 33.333 0.00 0.00 0.00 2.83
2381 4030 8.372459 TGTTTGGTATTGTAGATGTAGACTGTT 58.628 33.333 0.00 0.00 0.00 3.16
2382 4031 7.903145 TGTTTGGTATTGTAGATGTAGACTGT 58.097 34.615 0.00 0.00 0.00 3.55
2383 4032 8.820933 CATGTTTGGTATTGTAGATGTAGACTG 58.179 37.037 0.00 0.00 0.00 3.51
2384 4033 8.540388 ACATGTTTGGTATTGTAGATGTAGACT 58.460 33.333 0.00 0.00 0.00 3.24
2385 4034 8.718102 ACATGTTTGGTATTGTAGATGTAGAC 57.282 34.615 0.00 0.00 0.00 2.59
2386 4035 9.811995 GTACATGTTTGGTATTGTAGATGTAGA 57.188 33.333 2.30 0.00 0.00 2.59
2387 4036 9.594478 TGTACATGTTTGGTATTGTAGATGTAG 57.406 33.333 2.30 0.00 0.00 2.74
2389 4038 9.461312 AATGTACATGTTTGGTATTGTAGATGT 57.539 29.630 9.63 0.00 31.34 3.06
2390 4039 9.935682 GAATGTACATGTTTGGTATTGTAGATG 57.064 33.333 9.63 0.00 31.34 2.90
2391 4040 9.905713 AGAATGTACATGTTTGGTATTGTAGAT 57.094 29.630 9.63 0.00 31.99 1.98
2392 4041 9.161629 CAGAATGTACATGTTTGGTATTGTAGA 57.838 33.333 9.63 0.00 0.00 2.59
2393 4042 9.161629 TCAGAATGTACATGTTTGGTATTGTAG 57.838 33.333 9.63 0.00 37.40 2.74
2394 4043 9.508642 TTCAGAATGTACATGTTTGGTATTGTA 57.491 29.630 9.63 0.00 37.40 2.41
2395 4044 7.994425 TCAGAATGTACATGTTTGGTATTGT 57.006 32.000 9.63 0.00 37.40 2.71
2396 4045 9.689976 TTTTCAGAATGTACATGTTTGGTATTG 57.310 29.630 9.63 0.00 37.40 1.90
2436 4085 5.266733 ACCAAATGCACATCATTGGATAC 57.733 39.130 17.12 0.00 44.23 2.24
2437 4086 7.506599 AGAATACCAAATGCACATCATTGGATA 59.493 33.333 17.12 8.79 44.23 2.59
2438 4087 6.325545 AGAATACCAAATGCACATCATTGGAT 59.674 34.615 17.12 6.97 44.23 3.41
2439 4088 5.657745 AGAATACCAAATGCACATCATTGGA 59.342 36.000 17.12 5.42 44.23 3.53
2440 4089 5.909477 AGAATACCAAATGCACATCATTGG 58.091 37.500 11.02 11.02 44.23 3.16
2441 4090 7.933396 TCTAGAATACCAAATGCACATCATTG 58.067 34.615 0.00 0.00 44.23 2.82
2442 4091 8.573885 CATCTAGAATACCAAATGCACATCATT 58.426 33.333 0.00 0.00 46.82 2.57
2443 4092 7.722728 ACATCTAGAATACCAAATGCACATCAT 59.277 33.333 0.00 0.00 36.87 2.45
2444 4093 7.056006 ACATCTAGAATACCAAATGCACATCA 58.944 34.615 0.00 0.00 0.00 3.07
2445 4094 7.502120 ACATCTAGAATACCAAATGCACATC 57.498 36.000 0.00 0.00 0.00 3.06
2446 4095 7.445402 GGTACATCTAGAATACCAAATGCACAT 59.555 37.037 22.87 0.00 38.61 3.21
2447 4096 6.765989 GGTACATCTAGAATACCAAATGCACA 59.234 38.462 22.87 0.00 38.61 4.57
2448 4097 6.992715 AGGTACATCTAGAATACCAAATGCAC 59.007 38.462 26.72 9.05 40.81 4.57
2449 4098 7.136822 AGGTACATCTAGAATACCAAATGCA 57.863 36.000 26.72 0.00 40.81 3.96
2450 4099 8.368668 AGTAGGTACATCTAGAATACCAAATGC 58.631 37.037 26.72 15.90 40.81 3.56
2491 4248 9.868277 AAAGTCAAACATTACAAACTTTGATCA 57.132 25.926 8.55 0.00 36.06 2.92
2495 4252 8.226448 TGCAAAAGTCAAACATTACAAACTTTG 58.774 29.630 0.00 0.00 37.12 2.77
2496 4253 8.316640 TGCAAAAGTCAAACATTACAAACTTT 57.683 26.923 0.00 0.00 38.27 2.66
2498 4255 7.897575 TTGCAAAAGTCAAACATTACAAACT 57.102 28.000 0.00 0.00 0.00 2.66
2499 4256 8.941127 TTTTGCAAAAGTCAAACATTACAAAC 57.059 26.923 20.46 0.00 33.66 2.93
2502 4259 9.160496 AGATTTTTGCAAAAGTCAAACATTACA 57.840 25.926 34.74 15.56 37.17 2.41
2507 4264 9.474920 CCTATAGATTTTTGCAAAAGTCAAACA 57.525 29.630 34.74 22.58 37.17 2.83
2511 4268 7.039784 AGTGCCTATAGATTTTTGCAAAAGTCA 60.040 33.333 34.74 25.12 37.17 3.41
2516 4273 7.695480 TGTAGTGCCTATAGATTTTTGCAAA 57.305 32.000 8.05 8.05 0.00 3.68
2517 4274 7.880160 ATGTAGTGCCTATAGATTTTTGCAA 57.120 32.000 0.00 0.00 0.00 4.08
2518 4275 7.880160 AATGTAGTGCCTATAGATTTTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
2519 4276 9.831737 CATAATGTAGTGCCTATAGATTTTTGC 57.168 33.333 0.00 0.00 0.00 3.68
2523 4280 9.726438 GTTCCATAATGTAGTGCCTATAGATTT 57.274 33.333 0.00 0.00 0.00 2.17
2524 4281 8.035394 CGTTCCATAATGTAGTGCCTATAGATT 58.965 37.037 0.00 0.00 0.00 2.40
2525 4282 7.363880 CCGTTCCATAATGTAGTGCCTATAGAT 60.364 40.741 0.00 0.00 0.00 1.98
2526 4283 6.071560 CCGTTCCATAATGTAGTGCCTATAGA 60.072 42.308 0.00 0.00 0.00 1.98
2527 4284 6.071560 TCCGTTCCATAATGTAGTGCCTATAG 60.072 42.308 0.00 0.00 0.00 1.31
2528 4285 5.776208 TCCGTTCCATAATGTAGTGCCTATA 59.224 40.000 0.00 0.00 0.00 1.31
2529 4286 4.591498 TCCGTTCCATAATGTAGTGCCTAT 59.409 41.667 0.00 0.00 0.00 2.57
2530 4287 3.962063 TCCGTTCCATAATGTAGTGCCTA 59.038 43.478 0.00 0.00 0.00 3.93
2531 4288 2.769663 TCCGTTCCATAATGTAGTGCCT 59.230 45.455 0.00 0.00 0.00 4.75
2532 4289 3.131396 CTCCGTTCCATAATGTAGTGCC 58.869 50.000 0.00 0.00 0.00 5.01
2533 4290 3.131396 CCTCCGTTCCATAATGTAGTGC 58.869 50.000 0.00 0.00 0.00 4.40
2534 4291 3.386726 TCCCTCCGTTCCATAATGTAGTG 59.613 47.826 0.00 0.00 0.00 2.74
2535 4292 3.641906 CTCCCTCCGTTCCATAATGTAGT 59.358 47.826 0.00 0.00 0.00 2.73
2536 4293 3.641906 ACTCCCTCCGTTCCATAATGTAG 59.358 47.826 0.00 0.00 0.00 2.74
2537 4294 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
2538 4295 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
2539 4296 4.528596 AGATACTCCCTCCGTTCCATAATG 59.471 45.833 0.00 0.00 0.00 1.90
2561 4321 6.579865 ACTGAAAATACAGACGGGGTAATAG 58.420 40.000 0.00 0.00 40.63 1.73
2719 4490 6.463614 GCCATCAGTATACCTTGAAGATGACT 60.464 42.308 0.00 0.00 34.79 3.41
2730 4501 5.887214 TTACATGTGCCATCAGTATACCT 57.113 39.130 9.11 0.00 0.00 3.08
2731 4502 8.615878 TTTATTACATGTGCCATCAGTATACC 57.384 34.615 9.11 0.00 0.00 2.73
2772 4581 1.445716 GCATGCAGCTGTCAGGATCC 61.446 60.000 21.36 2.48 41.15 3.36
2799 4611 6.094603 AGTGCAAGTTTTCAGGATGCTATTAG 59.905 38.462 0.00 0.00 37.86 1.73
2805 4617 3.375782 AAGTGCAAGTTTTCAGGATGC 57.624 42.857 0.00 0.00 37.52 3.91
2844 4664 1.953559 TTCGACCATTGAGCATAGCC 58.046 50.000 0.00 0.00 0.00 3.93
3057 4939 7.878127 AGAGCTTTTCTAAATACTACAAGTGCA 59.122 33.333 0.00 0.00 33.23 4.57
3159 5045 5.531634 TCGTCGTGGTTTTAGTGAACTAAT 58.468 37.500 3.84 0.00 38.16 1.73
3168 5054 7.745022 TGTATAATTCTCGTCGTGGTTTTAG 57.255 36.000 0.00 0.00 0.00 1.85
3169 5055 7.201342 CGTTGTATAATTCTCGTCGTGGTTTTA 60.201 37.037 0.00 0.00 0.00 1.52
3181 5069 5.532664 ACTCCCTCCGTTGTATAATTCTC 57.467 43.478 0.00 0.00 0.00 2.87
3218 5106 6.926313 AGAACTCTACTGGTTTGTTAGCTAG 58.074 40.000 0.00 0.00 0.00 3.42
3492 5395 7.487829 CGATTTGTCCAATTTATTTACACCCAG 59.512 37.037 0.00 0.00 0.00 4.45
3948 5873 6.817184 TGCTTAGTAGTCCATAGAAACATCC 58.183 40.000 0.00 0.00 0.00 3.51
3949 5874 8.894768 AATGCTTAGTAGTCCATAGAAACATC 57.105 34.615 0.00 0.00 0.00 3.06
3981 5906 3.257873 CACATGAATGCCCCAAGTAACAA 59.742 43.478 0.00 0.00 0.00 2.83
3995 5920 5.471556 TGCAAAATCCAGTTCACATGAAT 57.528 34.783 0.00 0.00 36.33 2.57
4023 5948 5.048991 ACACCGTCCAAATAGATGTGAAAAC 60.049 40.000 0.00 0.00 0.00 2.43
4062 5987 7.500992 TGGCACTTTTATTCAATGGTAAACAA 58.499 30.769 0.00 0.00 0.00 2.83
4107 6032 7.309805 GGGCAAACTCACTTAAATACCAGATTT 60.310 37.037 0.00 0.00 0.00 2.17
4169 6094 6.207221 TGCTGTCATATCAAACACAGTTCAAT 59.793 34.615 0.00 0.00 38.83 2.57
4187 6112 6.016276 GGGAGACTTTTATTTTCTTGCTGTCA 60.016 38.462 0.00 0.00 0.00 3.58
4192 6117 9.521503 GAATATGGGAGACTTTTATTTTCTTGC 57.478 33.333 0.00 0.00 0.00 4.01
4206 6131 9.450807 CGATTATTTTTGTTGAATATGGGAGAC 57.549 33.333 0.00 0.00 0.00 3.36
4272 6197 7.031975 GGACTTTGGCTATTTCAAGATTTGAG 58.968 38.462 0.00 0.00 41.38 3.02
4279 6204 5.011023 ACCTTTGGACTTTGGCTATTTCAAG 59.989 40.000 0.00 0.00 0.00 3.02
4320 6252 2.687935 ACAAGTTGAGCGTGTTTCCAAT 59.312 40.909 10.54 0.00 36.41 3.16
4354 6286 6.595716 GCAAACCAGATCACTCTAATGTACTT 59.404 38.462 0.00 0.00 0.00 2.24
4380 6312 5.125100 CTCTCAGGAAGAGCACTATCATC 57.875 47.826 0.00 0.00 44.95 2.92
4461 7167 6.442885 TGATGATGGTGAGATATAGCAGGATT 59.557 38.462 0.00 0.00 0.00 3.01
4582 7296 9.153721 GATCTTCAATAATGGAAAAATGTTGCA 57.846 29.630 0.00 0.00 0.00 4.08
4668 7383 6.869913 TCGGTATATTCCACGACAAAATATCC 59.130 38.462 0.00 0.00 30.40 2.59
4722 7440 4.968719 TGAAATACTCCTCCCATGCTCTAA 59.031 41.667 0.00 0.00 0.00 2.10
4811 7530 7.770897 GCTTTCCATAATTCTAGAAGTCTTCCA 59.229 37.037 9.02 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.