Multiple sequence alignment - TraesCS2D01G010800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G010800 chr2D 100.000 4564 0 0 1 4564 5329407 5324844 0.000000e+00 8429.0
1 TraesCS2D01G010800 chr2B 86.709 3160 217 104 770 3855 6265842 6262812 0.000000e+00 3321.0
2 TraesCS2D01G010800 chr2B 86.638 696 61 14 3886 4563 6262359 6261678 0.000000e+00 741.0
3 TraesCS2D01G010800 chr2A 94.294 1998 84 16 2577 4563 3965858 3963880 0.000000e+00 3031.0
4 TraesCS2D01G010800 chr2A 88.074 1568 94 43 1073 2570 3967451 3965907 0.000000e+00 1773.0
5 TraesCS2D01G010800 chr2A 82.169 415 34 17 555 937 3967992 3967586 2.050000e-83 320.0
6 TraesCS2D01G010800 chr3B 76.573 1144 172 48 1450 2541 793273090 793271991 1.440000e-149 540.0
7 TraesCS2D01G010800 chr3B 76.729 1070 161 44 1525 2541 402460573 402461607 2.430000e-142 516.0
8 TraesCS2D01G010800 chr4A 76.801 1069 162 44 1525 2541 615519816 615520850 5.230000e-144 521.0
9 TraesCS2D01G010800 chr7B 80.132 302 41 13 2137 2426 683943214 683943508 1.660000e-49 207.0
10 TraesCS2D01G010800 chr3D 77.836 379 52 14 1525 1886 308777279 308776916 5.990000e-49 206.0
11 TraesCS2D01G010800 chr3D 75.420 476 75 23 2094 2541 308776860 308776399 4.660000e-45 193.0
12 TraesCS2D01G010800 chr6D 75.891 477 72 23 2094 2541 27487993 27488455 2.150000e-48 204.0
13 TraesCS2D01G010800 chr6D 79.612 103 20 1 1147 1249 38884655 38884756 6.330000e-09 73.1
14 TraesCS2D01G010800 chr6A 75.758 429 71 20 2137 2541 521443796 521443377 7.800000e-43 185.0
15 TraesCS2D01G010800 chr6A 79.612 103 20 1 1147 1249 51406338 51406439 6.330000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G010800 chr2D 5324844 5329407 4563 True 8429 8429 100.0000 1 4564 1 chr2D.!!$R1 4563
1 TraesCS2D01G010800 chr2B 6261678 6265842 4164 True 2031 3321 86.6735 770 4563 2 chr2B.!!$R1 3793
2 TraesCS2D01G010800 chr2A 3963880 3967992 4112 True 1708 3031 88.1790 555 4563 3 chr2A.!!$R1 4008
3 TraesCS2D01G010800 chr3B 793271991 793273090 1099 True 540 540 76.5730 1450 2541 1 chr3B.!!$R1 1091
4 TraesCS2D01G010800 chr3B 402460573 402461607 1034 False 516 516 76.7290 1525 2541 1 chr3B.!!$F1 1016
5 TraesCS2D01G010800 chr4A 615519816 615520850 1034 False 521 521 76.8010 1525 2541 1 chr4A.!!$F1 1016


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
198 199 0.032416 TAGGGTTTCGGGAGAGGGAG 60.032 60.0 0.00 0.0 41.75 4.30 F
360 361 0.098728 ATCCTTACAAATGCACGCGC 59.901 50.0 5.73 0.0 39.24 6.86 F
536 537 0.169672 CAAACTTGGCTCGCAGATGG 59.830 55.0 0.00 0.0 33.89 3.51 F
620 621 0.252696 AAATTCCCCTTCCCTTGCCC 60.253 55.0 0.00 0.0 0.00 5.36 F
1417 1528 0.260230 TTTGGGGCTTGTGGTTCAGA 59.740 50.0 0.00 0.0 0.00 3.27 F
2130 2308 0.389025 CCTGGCAACCCTTGTGAAAC 59.611 55.0 0.00 0.0 37.35 2.78 F
2133 2311 0.673985 GGCAACCCTTGTGAAACTCC 59.326 55.0 0.00 0.0 38.04 3.85 F
2842 3093 0.966875 ATGGTGCAATGACGGCATGT 60.967 50.0 3.39 0.0 44.11 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2362 0.674581 TGTCGCTGCAGAAGAATGGG 60.675 55.000 20.43 0.00 0.00 4.00 R
2376 2565 0.318955 GCAACAGTGCCCATGTCAAC 60.319 55.000 0.00 0.00 45.68 3.18 R
2492 2697 4.640201 GGAAAGATAACTATGCTTGGCACA 59.360 41.667 0.00 0.00 43.04 4.57 R
2580 2831 6.412362 TCTGTTTGGCCTAAATAAAGCAAA 57.588 33.333 3.32 0.00 0.00 3.68 R
3261 3512 0.164647 GGCATCGCGATGATAAGCAC 59.835 55.000 44.20 27.21 41.20 4.40 R
3262 3513 0.249826 TGGCATCGCGATGATAAGCA 60.250 50.000 44.20 20.46 41.20 3.91 R
3266 3517 0.320596 TGCATGGCATCGCGATGATA 60.321 50.000 44.20 32.61 45.27 2.15 R
4394 5100 0.320697 AGGAGAACACGGCAAGTACC 59.679 55.000 0.00 0.00 0.00 3.34 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.411904 TGCAGGGCAAAATAAAAAGCG 58.588 42.857 0.00 0.00 34.76 4.68
26 27 2.036475 TGCAGGGCAAAATAAAAAGCGA 59.964 40.909 0.00 0.00 34.76 4.93
27 28 2.667969 GCAGGGCAAAATAAAAAGCGAG 59.332 45.455 0.00 0.00 0.00 5.03
28 29 3.613910 GCAGGGCAAAATAAAAAGCGAGA 60.614 43.478 0.00 0.00 0.00 4.04
29 30 3.920412 CAGGGCAAAATAAAAAGCGAGAC 59.080 43.478 0.00 0.00 0.00 3.36
30 31 3.572255 AGGGCAAAATAAAAAGCGAGACA 59.428 39.130 0.00 0.00 0.00 3.41
31 32 4.038642 AGGGCAAAATAAAAAGCGAGACAA 59.961 37.500 0.00 0.00 0.00 3.18
32 33 4.149922 GGGCAAAATAAAAAGCGAGACAAC 59.850 41.667 0.00 0.00 0.00 3.32
33 34 4.742659 GGCAAAATAAAAAGCGAGACAACA 59.257 37.500 0.00 0.00 0.00 3.33
34 35 5.107875 GGCAAAATAAAAAGCGAGACAACAG 60.108 40.000 0.00 0.00 0.00 3.16
35 36 5.458779 GCAAAATAAAAAGCGAGACAACAGT 59.541 36.000 0.00 0.00 0.00 3.55
36 37 6.635239 GCAAAATAAAAAGCGAGACAACAGTA 59.365 34.615 0.00 0.00 0.00 2.74
37 38 7.357287 GCAAAATAAAAAGCGAGACAACAGTAC 60.357 37.037 0.00 0.00 0.00 2.73
38 39 5.857822 ATAAAAAGCGAGACAACAGTACC 57.142 39.130 0.00 0.00 0.00 3.34
39 40 1.779569 AAAGCGAGACAACAGTACCG 58.220 50.000 0.00 0.00 0.00 4.02
40 41 0.672342 AAGCGAGACAACAGTACCGT 59.328 50.000 0.00 0.00 0.00 4.83
41 42 1.527034 AGCGAGACAACAGTACCGTA 58.473 50.000 0.00 0.00 0.00 4.02
42 43 1.198637 AGCGAGACAACAGTACCGTAC 59.801 52.381 0.00 0.00 0.00 3.67
43 44 1.069022 GCGAGACAACAGTACCGTACA 60.069 52.381 11.26 0.00 0.00 2.90
44 45 2.605338 GCGAGACAACAGTACCGTACAA 60.605 50.000 11.26 0.00 0.00 2.41
45 46 2.975851 CGAGACAACAGTACCGTACAAC 59.024 50.000 11.26 0.00 0.00 3.32
46 47 2.975851 GAGACAACAGTACCGTACAACG 59.024 50.000 11.26 1.97 42.11 4.10
47 48 2.618241 AGACAACAGTACCGTACAACGA 59.382 45.455 11.26 0.00 46.05 3.85
48 49 2.721090 GACAACAGTACCGTACAACGAC 59.279 50.000 11.26 0.00 46.05 4.34
49 50 2.098934 ACAACAGTACCGTACAACGACA 59.901 45.455 11.26 0.00 46.05 4.35
50 51 2.405892 ACAGTACCGTACAACGACAC 57.594 50.000 11.26 0.00 46.05 3.67
51 52 1.675483 ACAGTACCGTACAACGACACA 59.325 47.619 11.26 0.00 46.05 3.72
52 53 2.098934 ACAGTACCGTACAACGACACAA 59.901 45.455 11.26 0.00 46.05 3.33
53 54 2.468777 CAGTACCGTACAACGACACAAC 59.531 50.000 11.26 0.00 46.05 3.32
54 55 2.098934 AGTACCGTACAACGACACAACA 59.901 45.455 11.26 0.00 46.05 3.33
55 56 2.007360 ACCGTACAACGACACAACAA 57.993 45.000 0.15 0.00 46.05 2.83
56 57 1.928503 ACCGTACAACGACACAACAAG 59.071 47.619 0.15 0.00 46.05 3.16
57 58 1.928503 CCGTACAACGACACAACAAGT 59.071 47.619 0.15 0.00 46.05 3.16
58 59 2.285371 CCGTACAACGACACAACAAGTG 60.285 50.000 0.15 0.00 46.05 3.16
78 79 9.988815 ACAAGTGTGATAATATATTGTCTCCTC 57.011 33.333 19.29 12.73 0.00 3.71
79 80 9.429359 CAAGTGTGATAATATATTGTCTCCTCC 57.571 37.037 19.29 9.31 0.00 4.30
80 81 7.831753 AGTGTGATAATATATTGTCTCCTCCG 58.168 38.462 19.29 0.00 0.00 4.63
81 82 7.036220 GTGTGATAATATATTGTCTCCTCCGG 58.964 42.308 19.29 0.00 0.00 5.14
82 83 6.951778 TGTGATAATATATTGTCTCCTCCGGA 59.048 38.462 19.29 2.93 0.00 5.14
83 84 7.619698 TGTGATAATATATTGTCTCCTCCGGAT 59.380 37.037 19.29 0.00 0.00 4.18
84 85 9.132923 GTGATAATATATTGTCTCCTCCGGATA 57.867 37.037 19.29 0.00 0.00 2.59
85 86 9.883293 TGATAATATATTGTCTCCTCCGGATAT 57.117 33.333 19.29 0.00 0.00 1.63
91 92 8.927675 ATATTGTCTCCTCCGGATATATAGAC 57.072 38.462 3.57 13.75 0.00 2.59
92 93 5.774102 TGTCTCCTCCGGATATATAGACA 57.226 43.478 21.13 21.13 30.58 3.41
93 94 5.498393 TGTCTCCTCCGGATATATAGACAC 58.502 45.833 21.13 6.74 28.93 3.67
94 95 5.013808 TGTCTCCTCCGGATATATAGACACA 59.986 44.000 21.13 8.58 28.93 3.72
95 96 6.123651 GTCTCCTCCGGATATATAGACACAT 58.876 44.000 3.57 0.00 0.00 3.21
96 97 6.261381 GTCTCCTCCGGATATATAGACACATC 59.739 46.154 3.57 0.00 0.00 3.06
97 98 5.123936 TCCTCCGGATATATAGACACATCG 58.876 45.833 3.57 0.00 0.00 3.84
98 99 4.882427 CCTCCGGATATATAGACACATCGT 59.118 45.833 3.57 0.00 0.00 3.73
99 100 5.007823 CCTCCGGATATATAGACACATCGTC 59.992 48.000 3.57 0.00 45.77 4.20
109 110 0.872451 ACACATCGTCGCAACGTTGA 60.872 50.000 31.62 10.86 46.60 3.18
110 111 0.179275 CACATCGTCGCAACGTTGAG 60.179 55.000 31.62 27.66 46.60 3.02
111 112 0.596600 ACATCGTCGCAACGTTGAGT 60.597 50.000 31.62 9.73 46.60 3.41
112 113 0.091344 CATCGTCGCAACGTTGAGTC 59.909 55.000 31.62 23.39 46.60 3.36
113 114 2.459904 CGTCGCAACGTTGAGTCG 59.540 61.111 31.62 29.90 43.94 4.18
114 115 2.007114 CGTCGCAACGTTGAGTCGA 61.007 57.895 34.12 27.55 43.94 4.20
115 116 1.767388 GTCGCAACGTTGAGTCGAG 59.233 57.895 31.62 13.77 31.17 4.04
116 117 1.371267 TCGCAACGTTGAGTCGAGG 60.371 57.895 31.62 10.41 34.70 4.63
117 118 1.660575 CGCAACGTTGAGTCGAGGT 60.661 57.895 31.62 0.00 34.70 3.85
118 119 1.606350 CGCAACGTTGAGTCGAGGTC 61.606 60.000 31.62 9.39 34.70 3.85
119 120 0.318784 GCAACGTTGAGTCGAGGTCT 60.319 55.000 31.62 0.00 34.70 3.85
120 121 1.868519 GCAACGTTGAGTCGAGGTCTT 60.869 52.381 31.62 0.00 34.70 3.01
121 122 1.787155 CAACGTTGAGTCGAGGTCTTG 59.213 52.381 23.90 0.00 34.70 3.02
122 123 1.315690 ACGTTGAGTCGAGGTCTTGA 58.684 50.000 0.00 0.00 34.70 3.02
123 124 1.887198 ACGTTGAGTCGAGGTCTTGAT 59.113 47.619 0.00 0.00 34.70 2.57
124 125 2.095161 ACGTTGAGTCGAGGTCTTGATC 60.095 50.000 0.00 0.00 34.70 2.92
125 126 2.520979 GTTGAGTCGAGGTCTTGATCG 58.479 52.381 0.00 0.00 40.26 3.69
126 127 2.109425 TGAGTCGAGGTCTTGATCGA 57.891 50.000 0.00 0.00 45.06 3.59
133 134 3.262135 GAGGTCTTGATCGATCTCGTC 57.738 52.381 25.02 17.59 40.80 4.20
134 135 2.614520 GAGGTCTTGATCGATCTCGTCA 59.385 50.000 25.02 4.15 40.80 4.35
135 136 2.356382 AGGTCTTGATCGATCTCGTCAC 59.644 50.000 25.02 13.93 40.80 3.67
136 137 2.367772 GTCTTGATCGATCTCGTCACG 58.632 52.381 25.02 5.13 40.80 4.35
137 138 1.330829 TCTTGATCGATCTCGTCACGG 59.669 52.381 25.02 7.36 40.80 4.94
138 139 1.064208 CTTGATCGATCTCGTCACGGT 59.936 52.381 25.02 0.00 40.80 4.83
139 140 0.377203 TGATCGATCTCGTCACGGTG 59.623 55.000 25.02 0.56 40.80 4.94
140 141 0.930742 GATCGATCTCGTCACGGTGC 60.931 60.000 18.29 0.00 40.80 5.01
141 142 2.337749 ATCGATCTCGTCACGGTGCC 62.338 60.000 2.51 0.00 40.80 5.01
142 143 2.579787 GATCTCGTCACGGTGCCG 60.580 66.667 5.04 5.04 46.03 5.69
143 144 4.796231 ATCTCGTCACGGTGCCGC 62.796 66.667 6.70 0.00 44.19 6.53
148 149 4.025401 GTCACGGTGCCGCCAAAG 62.025 66.667 10.87 0.00 44.19 2.77
149 150 4.243008 TCACGGTGCCGCCAAAGA 62.243 61.111 10.87 0.00 44.19 2.52
150 151 3.726517 CACGGTGCCGCCAAAGAG 61.727 66.667 10.87 0.00 44.19 2.85
160 161 3.668386 CCAAAGAGGGCACGGAAC 58.332 61.111 0.00 0.00 0.00 3.62
161 162 1.971695 CCAAAGAGGGCACGGAACC 60.972 63.158 0.00 0.00 0.00 3.62
162 163 2.032071 AAAGAGGGCACGGAACCG 59.968 61.111 11.83 11.83 46.03 4.44
163 164 3.546714 AAAGAGGGCACGGAACCGG 62.547 63.158 17.44 0.00 44.69 5.28
185 186 4.404098 CCAGCGGCGGTTAGGGTT 62.404 66.667 9.73 0.00 0.00 4.11
186 187 2.359478 CAGCGGCGGTTAGGGTTT 60.359 61.111 9.73 0.00 0.00 3.27
187 188 2.046604 AGCGGCGGTTAGGGTTTC 60.047 61.111 5.44 0.00 0.00 2.78
188 189 3.493440 GCGGCGGTTAGGGTTTCG 61.493 66.667 9.78 0.00 0.00 3.46
189 190 2.816520 CGGCGGTTAGGGTTTCGG 60.817 66.667 0.00 0.00 0.00 4.30
190 191 2.437180 GGCGGTTAGGGTTTCGGG 60.437 66.667 0.00 0.00 0.00 5.14
191 192 2.664398 GCGGTTAGGGTTTCGGGA 59.336 61.111 0.00 0.00 0.00 5.14
192 193 1.449070 GCGGTTAGGGTTTCGGGAG 60.449 63.158 0.00 0.00 0.00 4.30
193 194 1.891722 GCGGTTAGGGTTTCGGGAGA 61.892 60.000 0.00 0.00 0.00 3.71
194 195 0.175073 CGGTTAGGGTTTCGGGAGAG 59.825 60.000 0.00 0.00 41.75 3.20
195 196 0.540454 GGTTAGGGTTTCGGGAGAGG 59.460 60.000 0.00 0.00 41.75 3.69
196 197 0.540454 GTTAGGGTTTCGGGAGAGGG 59.460 60.000 0.00 0.00 41.75 4.30
197 198 0.414629 TTAGGGTTTCGGGAGAGGGA 59.585 55.000 0.00 0.00 41.75 4.20
198 199 0.032416 TAGGGTTTCGGGAGAGGGAG 60.032 60.000 0.00 0.00 41.75 4.30
199 200 2.585153 GGTTTCGGGAGAGGGAGC 59.415 66.667 0.00 0.00 41.75 4.70
200 201 2.184579 GTTTCGGGAGAGGGAGCG 59.815 66.667 0.00 0.00 41.75 5.03
201 202 3.075005 TTTCGGGAGAGGGAGCGG 61.075 66.667 0.00 0.00 41.75 5.52
215 216 4.237809 GCGGCGGGCTTTCGATTC 62.238 66.667 9.78 0.00 39.11 2.52
216 217 3.925238 CGGCGGGCTTTCGATTCG 61.925 66.667 0.00 0.00 0.00 3.34
217 218 4.237809 GGCGGGCTTTCGATTCGC 62.238 66.667 0.00 0.00 44.80 4.70
218 219 3.496131 GCGGGCTTTCGATTCGCA 61.496 61.111 0.00 0.00 44.87 5.10
219 220 2.399611 CGGGCTTTCGATTCGCAC 59.600 61.111 0.00 0.00 0.00 5.34
220 221 2.399611 GGGCTTTCGATTCGCACG 59.600 61.111 0.00 0.00 0.00 5.34
221 222 2.399611 GGCTTTCGATTCGCACGG 59.600 61.111 0.00 0.00 0.00 4.94
222 223 2.399611 GCTTTCGATTCGCACGGG 59.600 61.111 0.00 0.00 0.00 5.28
223 224 2.399611 CTTTCGATTCGCACGGGC 59.600 61.111 0.00 0.00 0.00 6.13
240 241 2.742372 CGCGGTAGGCAGCAAGTT 60.742 61.111 0.00 0.00 43.84 2.66
241 242 2.325082 CGCGGTAGGCAGCAAGTTT 61.325 57.895 0.00 0.00 43.84 2.66
242 243 1.210155 GCGGTAGGCAGCAAGTTTG 59.790 57.895 0.00 0.00 42.87 2.93
243 244 1.875963 CGGTAGGCAGCAAGTTTGG 59.124 57.895 0.00 0.00 0.00 3.28
244 245 1.586154 CGGTAGGCAGCAAGTTTGGG 61.586 60.000 0.00 0.00 0.00 4.12
245 246 0.539669 GGTAGGCAGCAAGTTTGGGT 60.540 55.000 0.00 0.00 0.00 4.51
246 247 1.271707 GGTAGGCAGCAAGTTTGGGTA 60.272 52.381 0.00 0.00 0.00 3.69
247 248 1.810755 GTAGGCAGCAAGTTTGGGTAC 59.189 52.381 0.00 0.00 0.00 3.34
248 249 0.889186 AGGCAGCAAGTTTGGGTACG 60.889 55.000 0.00 0.00 0.00 3.67
249 250 1.081442 GCAGCAAGTTTGGGTACGC 60.081 57.895 2.35 2.35 0.00 4.42
250 251 1.206578 CAGCAAGTTTGGGTACGCG 59.793 57.895 3.53 3.53 0.00 6.01
251 252 2.127003 GCAAGTTTGGGTACGCGC 60.127 61.111 5.73 0.00 0.00 6.86
252 253 2.559330 CAAGTTTGGGTACGCGCC 59.441 61.111 5.73 0.00 0.00 6.53
253 254 2.111460 AAGTTTGGGTACGCGCCA 59.889 55.556 5.73 1.98 0.00 5.69
254 255 1.302993 AAGTTTGGGTACGCGCCAT 60.303 52.632 5.73 0.00 0.00 4.40
255 256 1.582610 AAGTTTGGGTACGCGCCATG 61.583 55.000 5.73 0.00 0.00 3.66
256 257 2.748251 TTTGGGTACGCGCCATGG 60.748 61.111 7.63 7.63 0.00 3.66
257 258 3.554696 TTTGGGTACGCGCCATGGT 62.555 57.895 14.67 0.00 0.00 3.55
258 259 2.181445 TTTGGGTACGCGCCATGGTA 62.181 55.000 14.67 0.00 0.00 3.25
259 260 2.279918 GGGTACGCGCCATGGTAG 60.280 66.667 14.67 9.31 0.00 3.18
260 261 2.497770 GGTACGCGCCATGGTAGT 59.502 61.111 14.67 13.19 0.00 2.73
261 262 1.881252 GGTACGCGCCATGGTAGTG 60.881 63.158 14.67 16.36 0.00 2.74
262 263 1.140161 GTACGCGCCATGGTAGTGA 59.860 57.895 23.32 9.29 0.00 3.41
263 264 0.249322 GTACGCGCCATGGTAGTGAT 60.249 55.000 23.32 13.19 0.00 3.06
264 265 0.249280 TACGCGCCATGGTAGTGATG 60.249 55.000 23.32 7.16 0.00 3.07
265 266 1.521457 CGCGCCATGGTAGTGATGT 60.521 57.895 14.67 0.00 0.00 3.06
266 267 1.765161 CGCGCCATGGTAGTGATGTG 61.765 60.000 14.67 0.00 0.00 3.21
267 268 2.016961 CGCCATGGTAGTGATGTGC 58.983 57.895 14.67 0.00 0.00 4.57
268 269 0.744057 CGCCATGGTAGTGATGTGCA 60.744 55.000 14.67 0.00 0.00 4.57
279 280 3.843426 GTGATGTGCACGCTCTTATAC 57.157 47.619 13.13 2.46 37.83 1.47
280 281 3.186909 GTGATGTGCACGCTCTTATACA 58.813 45.455 13.13 0.00 37.83 2.29
281 282 3.804325 GTGATGTGCACGCTCTTATACAT 59.196 43.478 13.13 0.00 37.83 2.29
282 283 4.271049 GTGATGTGCACGCTCTTATACATT 59.729 41.667 13.13 0.00 37.83 2.71
283 284 4.875536 TGATGTGCACGCTCTTATACATTT 59.124 37.500 13.13 0.00 0.00 2.32
284 285 4.857871 TGTGCACGCTCTTATACATTTC 57.142 40.909 13.13 0.00 0.00 2.17
285 286 4.503910 TGTGCACGCTCTTATACATTTCT 58.496 39.130 13.13 0.00 0.00 2.52
286 287 4.935205 TGTGCACGCTCTTATACATTTCTT 59.065 37.500 13.13 0.00 0.00 2.52
287 288 5.411361 TGTGCACGCTCTTATACATTTCTTT 59.589 36.000 13.13 0.00 0.00 2.52
288 289 6.592220 TGTGCACGCTCTTATACATTTCTTTA 59.408 34.615 13.13 0.00 0.00 1.85
289 290 6.900299 GTGCACGCTCTTATACATTTCTTTAC 59.100 38.462 0.00 0.00 0.00 2.01
290 291 6.120812 GCACGCTCTTATACATTTCTTTACG 58.879 40.000 0.00 0.00 0.00 3.18
291 292 6.637365 CACGCTCTTATACATTTCTTTACGG 58.363 40.000 0.00 0.00 0.00 4.02
292 293 6.474427 CACGCTCTTATACATTTCTTTACGGA 59.526 38.462 0.00 0.00 0.00 4.69
293 294 6.696148 ACGCTCTTATACATTTCTTTACGGAG 59.304 38.462 0.00 0.00 0.00 4.63
294 295 6.144080 CGCTCTTATACATTTCTTTACGGAGG 59.856 42.308 0.00 0.00 0.00 4.30
295 296 6.424207 GCTCTTATACATTTCTTTACGGAGGG 59.576 42.308 0.00 0.00 0.00 4.30
296 297 7.664552 TCTTATACATTTCTTTACGGAGGGA 57.335 36.000 0.00 0.00 0.00 4.20
297 298 7.723324 TCTTATACATTTCTTTACGGAGGGAG 58.277 38.462 0.00 0.00 0.00 4.30
298 299 5.952347 ATACATTTCTTTACGGAGGGAGT 57.048 39.130 0.00 0.00 0.00 3.85
299 300 8.537728 TTATACATTTCTTTACGGAGGGAGTA 57.462 34.615 0.00 0.00 0.00 2.59
300 301 5.082251 ACATTTCTTTACGGAGGGAGTAC 57.918 43.478 0.00 0.00 0.00 2.73
301 302 4.529377 ACATTTCTTTACGGAGGGAGTACA 59.471 41.667 0.00 0.00 0.00 2.90
302 303 5.012354 ACATTTCTTTACGGAGGGAGTACAA 59.988 40.000 0.00 0.00 0.00 2.41
303 304 4.525912 TTCTTTACGGAGGGAGTACAAC 57.474 45.455 0.00 0.00 0.00 3.32
304 305 2.827921 TCTTTACGGAGGGAGTACAACC 59.172 50.000 0.00 0.00 0.00 3.77
306 307 0.327924 TACGGAGGGAGTACAACCGA 59.672 55.000 14.84 0.00 45.31 4.69
307 308 0.540365 ACGGAGGGAGTACAACCGAA 60.540 55.000 14.84 0.00 45.31 4.30
308 309 0.172803 CGGAGGGAGTACAACCGAAG 59.827 60.000 3.76 0.00 45.31 3.79
309 310 1.264295 GGAGGGAGTACAACCGAAGT 58.736 55.000 0.00 0.00 0.00 3.01
310 311 1.204231 GGAGGGAGTACAACCGAAGTC 59.796 57.143 0.00 0.00 0.00 3.01
311 312 1.891150 GAGGGAGTACAACCGAAGTCA 59.109 52.381 0.00 0.00 0.00 3.41
312 313 1.617357 AGGGAGTACAACCGAAGTCAC 59.383 52.381 0.00 0.00 0.00 3.67
313 314 1.617357 GGGAGTACAACCGAAGTCACT 59.383 52.381 0.00 0.00 0.00 3.41
314 315 2.352519 GGGAGTACAACCGAAGTCACTC 60.353 54.545 0.00 0.00 33.31 3.51
315 316 2.295349 GGAGTACAACCGAAGTCACTCA 59.705 50.000 0.00 0.00 35.26 3.41
316 317 3.306818 GAGTACAACCGAAGTCACTCAC 58.693 50.000 0.00 0.00 34.06 3.51
317 318 2.691526 AGTACAACCGAAGTCACTCACA 59.308 45.455 0.00 0.00 0.00 3.58
318 319 1.935933 ACAACCGAAGTCACTCACAC 58.064 50.000 0.00 0.00 0.00 3.82
319 320 1.206132 ACAACCGAAGTCACTCACACA 59.794 47.619 0.00 0.00 0.00 3.72
320 321 1.593006 CAACCGAAGTCACTCACACAC 59.407 52.381 0.00 0.00 0.00 3.82
321 322 0.821517 ACCGAAGTCACTCACACACA 59.178 50.000 0.00 0.00 0.00 3.72
322 323 1.209128 CCGAAGTCACTCACACACAC 58.791 55.000 0.00 0.00 0.00 3.82
323 324 1.470805 CCGAAGTCACTCACACACACA 60.471 52.381 0.00 0.00 0.00 3.72
324 325 1.588404 CGAAGTCACTCACACACACAC 59.412 52.381 0.00 0.00 0.00 3.82
325 326 2.616960 GAAGTCACTCACACACACACA 58.383 47.619 0.00 0.00 0.00 3.72
326 327 2.760634 AGTCACTCACACACACACAA 57.239 45.000 0.00 0.00 0.00 3.33
327 328 3.052455 AGTCACTCACACACACACAAA 57.948 42.857 0.00 0.00 0.00 2.83
328 329 2.742053 AGTCACTCACACACACACAAAC 59.258 45.455 0.00 0.00 0.00 2.93
329 330 1.729517 TCACTCACACACACACAAACG 59.270 47.619 0.00 0.00 0.00 3.60
330 331 1.729517 CACTCACACACACACAAACGA 59.270 47.619 0.00 0.00 0.00 3.85
331 332 1.999735 ACTCACACACACACAAACGAG 59.000 47.619 0.00 0.00 0.00 4.18
332 333 0.724549 TCACACACACACAAACGAGC 59.275 50.000 0.00 0.00 0.00 5.03
333 334 0.445829 CACACACACACAAACGAGCA 59.554 50.000 0.00 0.00 0.00 4.26
334 335 1.063912 CACACACACACAAACGAGCAT 59.936 47.619 0.00 0.00 0.00 3.79
335 336 2.286563 CACACACACACAAACGAGCATA 59.713 45.455 0.00 0.00 0.00 3.14
336 337 2.286833 ACACACACACAAACGAGCATAC 59.713 45.455 0.00 0.00 0.00 2.39
337 338 2.286563 CACACACACAAACGAGCATACA 59.713 45.455 0.00 0.00 0.00 2.29
338 339 2.286833 ACACACACAAACGAGCATACAC 59.713 45.455 0.00 0.00 0.00 2.90
339 340 2.543848 CACACACAAACGAGCATACACT 59.456 45.455 0.00 0.00 0.00 3.55
340 341 2.800544 ACACACAAACGAGCATACACTC 59.199 45.455 0.00 0.00 0.00 3.51
341 342 2.799978 CACACAAACGAGCATACACTCA 59.200 45.455 0.00 0.00 36.42 3.41
342 343 3.433274 CACACAAACGAGCATACACTCAT 59.567 43.478 0.00 0.00 36.42 2.90
343 344 3.679980 ACACAAACGAGCATACACTCATC 59.320 43.478 0.00 0.00 36.42 2.92
344 345 3.062639 CACAAACGAGCATACACTCATCC 59.937 47.826 0.00 0.00 36.42 3.51
345 346 3.055819 ACAAACGAGCATACACTCATCCT 60.056 43.478 0.00 0.00 36.42 3.24
346 347 3.895232 AACGAGCATACACTCATCCTT 57.105 42.857 0.00 0.00 36.42 3.36
347 348 5.109210 CAAACGAGCATACACTCATCCTTA 58.891 41.667 0.00 0.00 36.42 2.69
348 349 4.308899 ACGAGCATACACTCATCCTTAC 57.691 45.455 0.00 0.00 36.42 2.34
349 350 3.699538 ACGAGCATACACTCATCCTTACA 59.300 43.478 0.00 0.00 36.42 2.41
350 351 4.159693 ACGAGCATACACTCATCCTTACAA 59.840 41.667 0.00 0.00 36.42 2.41
351 352 5.109210 CGAGCATACACTCATCCTTACAAA 58.891 41.667 0.00 0.00 36.42 2.83
352 353 5.755375 CGAGCATACACTCATCCTTACAAAT 59.245 40.000 0.00 0.00 36.42 2.32
353 354 6.292542 CGAGCATACACTCATCCTTACAAATG 60.293 42.308 0.00 0.00 36.42 2.32
354 355 5.297776 AGCATACACTCATCCTTACAAATGC 59.702 40.000 0.00 0.00 36.99 3.56
355 356 5.066375 GCATACACTCATCCTTACAAATGCA 59.934 40.000 0.00 0.00 36.79 3.96
356 357 6.489675 CATACACTCATCCTTACAAATGCAC 58.510 40.000 0.00 0.00 0.00 4.57
357 358 3.436704 ACACTCATCCTTACAAATGCACG 59.563 43.478 0.00 0.00 0.00 5.34
358 359 2.420022 ACTCATCCTTACAAATGCACGC 59.580 45.455 0.00 0.00 0.00 5.34
359 360 1.396648 TCATCCTTACAAATGCACGCG 59.603 47.619 3.53 3.53 0.00 6.01
360 361 0.098728 ATCCTTACAAATGCACGCGC 59.901 50.000 5.73 0.00 39.24 6.86
361 362 1.863012 CCTTACAAATGCACGCGCG 60.863 57.895 30.96 30.96 42.97 6.86
362 363 2.487967 CTTACAAATGCACGCGCGC 61.488 57.895 32.58 23.91 42.97 6.86
374 375 3.065015 GCGCGCGCACTATATCTC 58.935 61.111 46.11 15.61 41.49 2.75
375 376 1.442857 GCGCGCGCACTATATCTCT 60.443 57.895 46.11 0.00 41.49 3.10
376 377 0.179197 GCGCGCGCACTATATCTCTA 60.179 55.000 46.11 0.00 41.49 2.43
377 378 1.532090 GCGCGCGCACTATATCTCTAT 60.532 52.381 46.11 0.00 41.49 1.98
378 379 2.786854 CGCGCGCACTATATCTCTATT 58.213 47.619 32.61 0.00 0.00 1.73
379 380 3.172050 CGCGCGCACTATATCTCTATTT 58.828 45.455 32.61 0.00 0.00 1.40
380 381 3.608506 CGCGCGCACTATATCTCTATTTT 59.391 43.478 32.61 0.00 0.00 1.82
381 382 4.090066 CGCGCGCACTATATCTCTATTTTT 59.910 41.667 32.61 0.00 0.00 1.94
382 383 5.308927 GCGCGCACTATATCTCTATTTTTG 58.691 41.667 29.10 0.00 0.00 2.44
383 384 5.118664 GCGCGCACTATATCTCTATTTTTGA 59.881 40.000 29.10 0.00 0.00 2.69
384 385 6.517597 CGCGCACTATATCTCTATTTTTGAC 58.482 40.000 8.75 0.00 0.00 3.18
385 386 6.517597 GCGCACTATATCTCTATTTTTGACG 58.482 40.000 0.30 0.00 0.00 4.35
386 387 6.362551 GCGCACTATATCTCTATTTTTGACGA 59.637 38.462 0.30 0.00 0.00 4.20
387 388 7.096189 GCGCACTATATCTCTATTTTTGACGAA 60.096 37.037 0.30 0.00 0.00 3.85
388 389 8.420945 CGCACTATATCTCTATTTTTGACGAAG 58.579 37.037 0.00 0.00 0.00 3.79
400 401 3.470267 ACGAAGTTATGGCGTGCG 58.530 55.556 0.00 0.00 37.78 5.34
401 402 2.021380 CGAAGTTATGGCGTGCGC 59.979 61.111 8.17 8.17 41.06 6.09
402 403 2.735677 CGAAGTTATGGCGTGCGCA 61.736 57.895 18.36 5.66 44.11 6.09
403 404 1.499949 GAAGTTATGGCGTGCGCAA 59.500 52.632 14.00 7.59 44.11 4.85
404 405 0.793104 GAAGTTATGGCGTGCGCAAC 60.793 55.000 14.00 7.55 44.11 4.17
405 406 1.511318 AAGTTATGGCGTGCGCAACA 61.511 50.000 14.00 12.88 44.11 3.33
406 407 1.136565 GTTATGGCGTGCGCAACAT 59.863 52.632 14.00 19.35 44.11 2.71
407 408 0.861450 GTTATGGCGTGCGCAACATC 60.861 55.000 21.86 6.24 44.11 3.06
408 409 2.303208 TTATGGCGTGCGCAACATCG 62.303 55.000 21.86 17.91 44.11 3.84
416 417 2.098298 CGCAACATCGCCGGAAAG 59.902 61.111 5.05 0.00 0.00 2.62
417 418 2.387445 CGCAACATCGCCGGAAAGA 61.387 57.895 5.05 0.25 0.00 2.52
418 419 1.705337 CGCAACATCGCCGGAAAGAT 61.705 55.000 5.05 3.24 0.00 2.40
419 420 0.451783 GCAACATCGCCGGAAAGATT 59.548 50.000 5.05 0.00 0.00 2.40
420 421 1.668751 GCAACATCGCCGGAAAGATTA 59.331 47.619 5.05 0.00 0.00 1.75
421 422 2.286418 GCAACATCGCCGGAAAGATTAG 60.286 50.000 5.05 0.00 0.00 1.73
422 423 3.194861 CAACATCGCCGGAAAGATTAGA 58.805 45.455 5.05 0.00 0.00 2.10
423 424 3.536956 ACATCGCCGGAAAGATTAGAA 57.463 42.857 5.05 0.00 0.00 2.10
424 425 4.073293 ACATCGCCGGAAAGATTAGAAT 57.927 40.909 5.05 0.00 0.00 2.40
425 426 5.209818 ACATCGCCGGAAAGATTAGAATA 57.790 39.130 5.05 0.00 0.00 1.75
426 427 5.607477 ACATCGCCGGAAAGATTAGAATAA 58.393 37.500 5.05 0.00 0.00 1.40
427 428 6.053005 ACATCGCCGGAAAGATTAGAATAAA 58.947 36.000 5.05 0.00 0.00 1.40
428 429 6.710744 ACATCGCCGGAAAGATTAGAATAAAT 59.289 34.615 5.05 0.00 0.00 1.40
429 430 6.780706 TCGCCGGAAAGATTAGAATAAATC 57.219 37.500 5.05 0.00 36.33 2.17
430 431 5.699458 TCGCCGGAAAGATTAGAATAAATCC 59.301 40.000 5.05 0.00 36.68 3.01
431 432 5.468746 CGCCGGAAAGATTAGAATAAATCCA 59.531 40.000 5.05 0.00 36.68 3.41
432 433 6.347725 CGCCGGAAAGATTAGAATAAATCCAG 60.348 42.308 5.05 0.00 36.68 3.86
433 434 6.710744 GCCGGAAAGATTAGAATAAATCCAGA 59.289 38.462 5.05 0.00 36.68 3.86
434 435 7.228706 GCCGGAAAGATTAGAATAAATCCAGAA 59.771 37.037 5.05 0.00 36.68 3.02
435 436 9.120538 CCGGAAAGATTAGAATAAATCCAGAAA 57.879 33.333 0.00 0.00 36.68 2.52
456 457 5.799681 AAAAAGTGAGCACCAATGTTTTG 57.200 34.783 0.00 0.00 26.58 2.44
457 458 4.470334 AAAGTGAGCACCAATGTTTTGT 57.530 36.364 0.00 0.00 0.00 2.83
458 459 3.715628 AGTGAGCACCAATGTTTTGTC 57.284 42.857 0.00 0.00 0.00 3.18
459 460 2.362077 AGTGAGCACCAATGTTTTGTCC 59.638 45.455 0.00 0.00 0.00 4.02
460 461 2.100584 GTGAGCACCAATGTTTTGTCCA 59.899 45.455 0.00 0.00 0.00 4.02
461 462 2.964464 TGAGCACCAATGTTTTGTCCAT 59.036 40.909 0.00 0.00 0.00 3.41
462 463 3.243805 TGAGCACCAATGTTTTGTCCATG 60.244 43.478 0.00 0.00 0.00 3.66
463 464 2.964464 AGCACCAATGTTTTGTCCATGA 59.036 40.909 0.00 0.00 0.00 3.07
464 465 3.059166 GCACCAATGTTTTGTCCATGAC 58.941 45.455 0.00 0.00 0.00 3.06
465 466 3.243839 GCACCAATGTTTTGTCCATGACT 60.244 43.478 0.00 0.00 33.15 3.41
466 467 4.740334 GCACCAATGTTTTGTCCATGACTT 60.740 41.667 0.00 0.00 33.15 3.01
467 468 4.746115 CACCAATGTTTTGTCCATGACTTG 59.254 41.667 0.00 0.00 33.15 3.16
468 469 4.648762 ACCAATGTTTTGTCCATGACTTGA 59.351 37.500 0.00 0.00 33.15 3.02
469 470 5.221303 ACCAATGTTTTGTCCATGACTTGAG 60.221 40.000 0.00 0.00 33.15 3.02
470 471 3.988379 TGTTTTGTCCATGACTTGAGC 57.012 42.857 0.00 0.00 33.15 4.26
471 472 2.622942 TGTTTTGTCCATGACTTGAGCC 59.377 45.455 0.00 0.00 33.15 4.70
472 473 1.909700 TTTGTCCATGACTTGAGCCC 58.090 50.000 0.00 0.00 33.15 5.19
473 474 1.067295 TTGTCCATGACTTGAGCCCT 58.933 50.000 0.00 0.00 33.15 5.19
474 475 0.615331 TGTCCATGACTTGAGCCCTC 59.385 55.000 0.00 0.00 33.15 4.30
475 476 0.460987 GTCCATGACTTGAGCCCTCG 60.461 60.000 0.00 0.00 0.00 4.63
476 477 0.904865 TCCATGACTTGAGCCCTCGT 60.905 55.000 0.00 0.00 0.00 4.18
477 478 0.742281 CCATGACTTGAGCCCTCGTG 60.742 60.000 0.00 0.00 0.00 4.35
478 479 0.742281 CATGACTTGAGCCCTCGTGG 60.742 60.000 0.00 0.00 37.09 4.94
488 489 2.445845 CCTCGTGGGCTGGGGATA 60.446 66.667 0.00 0.00 0.00 2.59
489 490 1.843376 CCTCGTGGGCTGGGGATAT 60.843 63.158 0.00 0.00 0.00 1.63
490 491 1.674057 CTCGTGGGCTGGGGATATC 59.326 63.158 0.00 0.00 0.00 1.63
491 492 1.074850 TCGTGGGCTGGGGATATCA 60.075 57.895 4.83 0.00 0.00 2.15
492 493 1.071471 CGTGGGCTGGGGATATCAC 59.929 63.158 4.83 0.00 0.00 3.06
493 494 1.071471 GTGGGCTGGGGATATCACG 59.929 63.158 4.83 0.00 0.00 4.35
494 495 2.146724 TGGGCTGGGGATATCACGG 61.147 63.158 4.83 3.23 0.00 4.94
495 496 2.032681 GGCTGGGGATATCACGGC 59.967 66.667 17.55 17.55 35.80 5.68
496 497 2.520536 GGCTGGGGATATCACGGCT 61.521 63.158 22.21 0.00 36.74 5.52
497 498 1.302033 GCTGGGGATATCACGGCTG 60.302 63.158 18.19 0.00 33.81 4.85
498 499 1.372683 CTGGGGATATCACGGCTGG 59.627 63.158 4.83 0.00 0.00 4.85
499 500 2.116983 CTGGGGATATCACGGCTGGG 62.117 65.000 4.83 0.00 0.00 4.45
500 501 2.032681 GGGATATCACGGCTGGGC 59.967 66.667 4.83 0.00 0.00 5.36
501 502 2.357517 GGATATCACGGCTGGGCG 60.358 66.667 14.67 14.67 0.00 6.13
502 503 2.421739 GATATCACGGCTGGGCGT 59.578 61.111 16.05 16.05 0.00 5.68
503 504 1.664965 GATATCACGGCTGGGCGTC 60.665 63.158 18.68 4.58 0.00 5.19
504 505 3.165160 ATATCACGGCTGGGCGTCC 62.165 63.158 18.68 0.00 0.00 4.79
516 517 2.825836 GCGTCCTGGCCATCCAAG 60.826 66.667 5.51 0.00 42.91 3.61
517 518 2.825836 CGTCCTGGCCATCCAAGC 60.826 66.667 5.51 0.00 42.91 4.01
518 519 2.356278 GTCCTGGCCATCCAAGCA 59.644 61.111 5.51 0.00 42.91 3.91
519 520 1.304381 GTCCTGGCCATCCAAGCAA 60.304 57.895 5.51 0.00 42.91 3.91
520 521 0.899717 GTCCTGGCCATCCAAGCAAA 60.900 55.000 5.51 0.00 42.91 3.68
521 522 0.899717 TCCTGGCCATCCAAGCAAAC 60.900 55.000 5.51 0.00 42.91 2.93
522 523 0.901580 CCTGGCCATCCAAGCAAACT 60.902 55.000 5.51 0.00 42.91 2.66
523 524 0.971386 CTGGCCATCCAAGCAAACTT 59.029 50.000 5.51 0.00 42.91 2.66
531 532 3.840437 AAGCAAACTTGGCTCGCA 58.160 50.000 0.00 0.00 41.66 5.10
532 533 1.656441 AAGCAAACTTGGCTCGCAG 59.344 52.632 0.00 0.00 41.66 5.18
533 534 0.819259 AAGCAAACTTGGCTCGCAGA 60.819 50.000 0.00 0.00 41.66 4.26
534 535 0.607489 AGCAAACTTGGCTCGCAGAT 60.607 50.000 0.00 0.00 36.81 2.90
535 536 0.455633 GCAAACTTGGCTCGCAGATG 60.456 55.000 0.00 0.00 33.89 2.90
536 537 0.169672 CAAACTTGGCTCGCAGATGG 59.830 55.000 0.00 0.00 33.89 3.51
537 538 0.962356 AAACTTGGCTCGCAGATGGG 60.962 55.000 0.00 0.00 33.89 4.00
538 539 1.841302 AACTTGGCTCGCAGATGGGA 61.841 55.000 0.00 0.00 33.89 4.37
539 540 1.147824 CTTGGCTCGCAGATGGGAT 59.852 57.895 0.00 0.00 36.39 3.85
540 541 0.465097 CTTGGCTCGCAGATGGGATT 60.465 55.000 0.00 0.00 36.39 3.01
541 542 0.836606 TTGGCTCGCAGATGGGATTA 59.163 50.000 0.00 0.00 36.39 1.75
542 543 0.836606 TGGCTCGCAGATGGGATTAA 59.163 50.000 0.00 0.00 36.39 1.40
543 544 1.211703 TGGCTCGCAGATGGGATTAAA 59.788 47.619 0.00 0.00 36.39 1.52
544 545 1.876156 GGCTCGCAGATGGGATTAAAG 59.124 52.381 0.00 0.00 36.39 1.85
545 546 1.876156 GCTCGCAGATGGGATTAAAGG 59.124 52.381 0.00 0.00 36.39 3.11
546 547 2.746472 GCTCGCAGATGGGATTAAAGGT 60.746 50.000 0.00 0.00 36.39 3.50
547 548 3.545703 CTCGCAGATGGGATTAAAGGTT 58.454 45.455 0.00 0.00 36.39 3.50
548 549 3.947834 CTCGCAGATGGGATTAAAGGTTT 59.052 43.478 0.00 0.00 36.39 3.27
549 550 4.340617 TCGCAGATGGGATTAAAGGTTTT 58.659 39.130 0.00 0.00 31.73 2.43
550 551 4.157656 TCGCAGATGGGATTAAAGGTTTTG 59.842 41.667 0.00 0.00 31.73 2.44
551 552 4.157656 CGCAGATGGGATTAAAGGTTTTGA 59.842 41.667 0.00 0.00 0.00 2.69
552 553 5.654497 GCAGATGGGATTAAAGGTTTTGAG 58.346 41.667 0.00 0.00 0.00 3.02
553 554 5.185828 GCAGATGGGATTAAAGGTTTTGAGT 59.814 40.000 0.00 0.00 0.00 3.41
574 575 3.685139 AGTATATCAATGGCTCCCGTG 57.315 47.619 0.00 0.00 0.00 4.94
600 601 2.124151 ATCCGCAGCCACCAATCC 60.124 61.111 0.00 0.00 0.00 3.01
612 613 2.501316 CCACCAATCCAAATTCCCCTTC 59.499 50.000 0.00 0.00 0.00 3.46
613 614 2.501316 CACCAATCCAAATTCCCCTTCC 59.499 50.000 0.00 0.00 0.00 3.46
616 617 3.453868 CAATCCAAATTCCCCTTCCCTT 58.546 45.455 0.00 0.00 0.00 3.95
617 618 2.621556 TCCAAATTCCCCTTCCCTTG 57.378 50.000 0.00 0.00 0.00 3.61
618 619 0.904649 CCAAATTCCCCTTCCCTTGC 59.095 55.000 0.00 0.00 0.00 4.01
620 621 0.252696 AAATTCCCCTTCCCTTGCCC 60.253 55.000 0.00 0.00 0.00 5.36
621 622 1.155664 AATTCCCCTTCCCTTGCCCT 61.156 55.000 0.00 0.00 0.00 5.19
647 648 2.677848 GCTTGTCCCCTTCCTCCC 59.322 66.667 0.00 0.00 0.00 4.30
648 649 1.925972 GCTTGTCCCCTTCCTCCCT 60.926 63.158 0.00 0.00 0.00 4.20
649 650 1.916206 GCTTGTCCCCTTCCTCCCTC 61.916 65.000 0.00 0.00 0.00 4.30
650 651 1.229853 TTGTCCCCTTCCTCCCTCC 60.230 63.158 0.00 0.00 0.00 4.30
651 652 2.367107 GTCCCCTTCCTCCCTCCC 60.367 72.222 0.00 0.00 0.00 4.30
675 676 1.808390 CCGTCCGTCCGTCCAATTC 60.808 63.158 0.00 0.00 0.00 2.17
717 729 4.562552 GGCTGGACTCTGCTAAATCTATCC 60.563 50.000 0.00 0.00 37.86 2.59
719 731 4.556697 TGGACTCTGCTAAATCTATCCCA 58.443 43.478 0.00 0.00 0.00 4.37
721 733 4.262678 GGACTCTGCTAAATCTATCCCACC 60.263 50.000 0.00 0.00 0.00 4.61
722 734 4.561752 ACTCTGCTAAATCTATCCCACCT 58.438 43.478 0.00 0.00 0.00 4.00
723 735 4.591072 ACTCTGCTAAATCTATCCCACCTC 59.409 45.833 0.00 0.00 0.00 3.85
724 736 3.574396 TCTGCTAAATCTATCCCACCTCG 59.426 47.826 0.00 0.00 0.00 4.63
725 737 3.305720 TGCTAAATCTATCCCACCTCGT 58.694 45.455 0.00 0.00 0.00 4.18
726 738 3.321111 TGCTAAATCTATCCCACCTCGTC 59.679 47.826 0.00 0.00 0.00 4.20
727 739 3.574826 GCTAAATCTATCCCACCTCGTCT 59.425 47.826 0.00 0.00 0.00 4.18
728 740 4.321378 GCTAAATCTATCCCACCTCGTCTC 60.321 50.000 0.00 0.00 0.00 3.36
729 741 1.898902 ATCTATCCCACCTCGTCTCG 58.101 55.000 0.00 0.00 0.00 4.04
730 742 0.545171 TCTATCCCACCTCGTCTCGT 59.455 55.000 0.00 0.00 0.00 4.18
731 743 0.945813 CTATCCCACCTCGTCTCGTC 59.054 60.000 0.00 0.00 0.00 4.20
732 744 0.545171 TATCCCACCTCGTCTCGTCT 59.455 55.000 0.00 0.00 0.00 4.18
733 745 0.748729 ATCCCACCTCGTCTCGTCTC 60.749 60.000 0.00 0.00 0.00 3.36
734 746 2.751913 CCCACCTCGTCTCGTCTCG 61.752 68.421 0.00 0.00 0.00 4.04
735 747 2.033755 CCACCTCGTCTCGTCTCGT 61.034 63.158 0.00 0.00 0.00 4.18
736 748 1.420702 CACCTCGTCTCGTCTCGTC 59.579 63.158 0.00 0.00 0.00 4.20
737 749 1.015085 CACCTCGTCTCGTCTCGTCT 61.015 60.000 0.00 0.00 0.00 4.18
738 750 0.737019 ACCTCGTCTCGTCTCGTCTC 60.737 60.000 0.00 0.00 0.00 3.36
739 751 1.626905 CTCGTCTCGTCTCGTCTCG 59.373 63.158 0.00 0.00 0.00 4.04
793 824 3.134127 GCCACACATTCCTCGCCC 61.134 66.667 0.00 0.00 0.00 6.13
829 860 1.650528 CCACAACCCTCTCTTCTCCT 58.349 55.000 0.00 0.00 0.00 3.69
834 865 1.388174 ACCCTCTCTTCTCCTCTCCA 58.612 55.000 0.00 0.00 0.00 3.86
836 867 1.287739 CCCTCTCTTCTCCTCTCCACT 59.712 57.143 0.00 0.00 0.00 4.00
949 1004 4.624364 TGTCCACGCACCAGCCAG 62.624 66.667 0.00 0.00 37.52 4.85
962 1017 4.459089 GCCAGGCGTGAGTCCCTC 62.459 72.222 8.24 0.00 35.23 4.30
964 1019 2.575993 CAGGCGTGAGTCCCTCTG 59.424 66.667 0.00 0.00 35.23 3.35
984 1042 2.498078 TGATTCATACGCTACCACACCA 59.502 45.455 0.00 0.00 0.00 4.17
986 1044 2.665649 TCATACGCTACCACACCAAG 57.334 50.000 0.00 0.00 0.00 3.61
987 1045 2.172679 TCATACGCTACCACACCAAGA 58.827 47.619 0.00 0.00 0.00 3.02
998 1056 2.878406 CCACACCAAGAACTACCAACAG 59.122 50.000 0.00 0.00 0.00 3.16
1002 1060 2.775384 ACCAAGAACTACCAACAGACCA 59.225 45.455 0.00 0.00 0.00 4.02
1011 1069 2.049063 AACAGACCACGAGCGAGC 60.049 61.111 0.00 0.00 0.00 5.03
1012 1070 3.898627 AACAGACCACGAGCGAGCG 62.899 63.158 0.00 0.00 37.29 5.03
1013 1071 4.103103 CAGACCACGAGCGAGCGA 62.103 66.667 4.36 0.00 34.83 4.93
1014 1072 3.805307 AGACCACGAGCGAGCGAG 61.805 66.667 4.36 0.00 34.83 5.03
1039 1097 3.047877 CGCCCGCCCGGATTTATC 61.048 66.667 0.73 0.00 37.50 1.75
1040 1098 2.112297 GCCCGCCCGGATTTATCA 59.888 61.111 0.73 0.00 37.50 2.15
1041 1099 1.303317 GCCCGCCCGGATTTATCAT 60.303 57.895 0.73 0.00 37.50 2.45
1067 1125 2.825836 CCACCCAGGATTCTGCGC 60.826 66.667 0.00 0.00 41.22 6.09
1094 1189 1.376424 CAAGATGTCGGTGCTGGCT 60.376 57.895 0.00 0.00 0.00 4.75
1124 1219 4.856607 GAGGTCTTCCGCGAGCCG 62.857 72.222 8.23 0.00 39.05 5.52
1187 1282 4.749310 CTCTGGCTCGCGGCACTT 62.749 66.667 18.87 0.00 44.01 3.16
1190 1285 4.927782 TGGCTCGCGGCACTTGTT 62.928 61.111 18.87 0.00 44.01 2.83
1193 1288 3.726517 CTCGCGGCACTTGTTGGG 61.727 66.667 6.13 0.00 0.00 4.12
1374 1481 9.617975 GAGGAGATATTTTGTCTTTCAACAAAG 57.382 33.333 2.85 0.00 46.56 2.77
1390 1497 1.776667 CAAAGATATCCTCCTGCCCCA 59.223 52.381 0.00 0.00 0.00 4.96
1411 1518 1.278537 ATTGGATTTGGGGCTTGTGG 58.721 50.000 0.00 0.00 0.00 4.17
1417 1528 0.260230 TTTGGGGCTTGTGGTTCAGA 59.740 50.000 0.00 0.00 0.00 3.27
1466 1583 3.157949 AGAGCTAAGGCGGCCTCC 61.158 66.667 24.08 13.68 44.37 4.30
1467 1584 3.470888 GAGCTAAGGCGGCCTCCA 61.471 66.667 24.08 12.49 44.37 3.86
1661 1786 4.642429 TCCCAGAGCTTTTTAGTTGAGTC 58.358 43.478 0.00 0.00 0.00 3.36
1669 1797 5.462398 AGCTTTTTAGTTGAGTCACTGTACG 59.538 40.000 0.00 0.00 0.00 3.67
1684 1812 4.274950 CACTGTACGACCCAAGAATTTTGT 59.725 41.667 0.00 0.00 0.00 2.83
1685 1813 4.885325 ACTGTACGACCCAAGAATTTTGTT 59.115 37.500 0.00 0.00 0.00 2.83
1686 1814 5.358725 ACTGTACGACCCAAGAATTTTGTTT 59.641 36.000 0.00 0.00 0.00 2.83
1687 1815 6.127563 ACTGTACGACCCAAGAATTTTGTTTT 60.128 34.615 0.00 0.00 0.00 2.43
1688 1816 6.037098 TGTACGACCCAAGAATTTTGTTTTG 58.963 36.000 0.00 0.00 0.00 2.44
1691 1819 4.260172 CGACCCAAGAATTTTGTTTTGTGC 60.260 41.667 0.00 0.00 0.00 4.57
1806 1959 3.569701 AGCCAGTTGTTGTAGATTTGTGG 59.430 43.478 0.00 0.00 0.00 4.17
1827 1980 3.071479 GGACTAGTTGCAACGGAATTCA 58.929 45.455 23.21 3.94 0.00 2.57
1829 1982 2.484264 ACTAGTTGCAACGGAATTCAGC 59.516 45.455 23.21 6.17 0.00 4.26
1854 2007 8.596380 GCTCAGTAATTCAGTGTTTAGACATAC 58.404 37.037 0.00 0.00 38.23 2.39
2130 2308 0.389025 CCTGGCAACCCTTGTGAAAC 59.611 55.000 0.00 0.00 37.35 2.78
2133 2311 0.673985 GGCAACCCTTGTGAAACTCC 59.326 55.000 0.00 0.00 38.04 3.85
2256 2434 4.160626 GCATCTGGAAAGACCTACTACTGT 59.839 45.833 0.00 0.00 39.86 3.55
2271 2449 4.828829 ACTACTGTGTTACCAAGGTATGC 58.171 43.478 0.00 0.00 0.00 3.14
2376 2565 3.600388 AGAGTTCCTTTGCGTAATGGAG 58.400 45.455 17.92 0.00 40.14 3.86
2381 2570 3.071479 TCCTTTGCGTAATGGAGTTGAC 58.929 45.455 15.41 0.00 35.77 3.18
2444 2648 8.081025 GCAAATTTGGAAAAAGATTTATTGCCA 58.919 29.630 19.47 0.00 0.00 4.92
2445 2649 9.962783 CAAATTTGGAAAAAGATTTATTGCCAA 57.037 25.926 10.49 0.00 30.85 4.52
2492 2697 7.715266 TGCACTGCATTCTATATCTATCTCT 57.285 36.000 0.00 0.00 31.71 3.10
2505 2710 4.597404 TCTATCTCTGTGCCAAGCATAG 57.403 45.455 6.97 6.97 46.57 2.23
2508 2713 4.760530 ATCTCTGTGCCAAGCATAGTTA 57.239 40.909 12.22 3.74 45.63 2.24
2570 2779 7.545265 GCTATCTCTAGTTTAGATGCCATTCAG 59.455 40.741 3.29 0.00 35.36 3.02
2594 2845 8.437742 CAGCATTGAAGTTTTGCTTTATTTAGG 58.562 33.333 6.26 0.00 43.94 2.69
2738 2989 6.488006 CAGGTATTATTCCAGTTCCTTCCATG 59.512 42.308 0.00 0.00 0.00 3.66
2790 3041 2.497273 AGGCCAATGAATTTACACCTGC 59.503 45.455 5.01 0.00 0.00 4.85
2842 3093 0.966875 ATGGTGCAATGACGGCATGT 60.967 50.000 3.39 0.00 44.11 3.21
2863 3114 2.306805 TGAGGTGCTCCTGTTTCATCAT 59.693 45.455 13.11 0.00 45.24 2.45
2923 3174 2.679342 GCAGCAGGGTATGTGGGGA 61.679 63.158 0.00 0.00 0.00 4.81
3001 3252 2.472059 GCCCATCTCGAAATGCGCA 61.472 57.895 14.96 14.96 40.61 6.09
3035 3286 1.135257 CCAACACAAAGTTTGTCGCCA 60.135 47.619 18.34 0.00 43.23 5.69
3118 3369 1.301716 GAAGCCGAAGCACTGGACA 60.302 57.895 0.00 0.00 43.56 4.02
3260 3511 6.012508 AGGAAGAAGATAGGAACCAAACATCA 60.013 38.462 0.00 0.00 0.00 3.07
3261 3512 6.317391 GGAAGAAGATAGGAACCAAACATCAG 59.683 42.308 0.00 0.00 0.00 2.90
3262 3513 6.380079 AGAAGATAGGAACCAAACATCAGT 57.620 37.500 0.00 0.00 0.00 3.41
3264 3515 4.265073 AGATAGGAACCAAACATCAGTGC 58.735 43.478 0.00 0.00 0.00 4.40
3266 3517 2.949447 AGGAACCAAACATCAGTGCTT 58.051 42.857 0.00 0.00 0.00 3.91
3267 3518 4.098914 AGGAACCAAACATCAGTGCTTA 57.901 40.909 0.00 0.00 0.00 3.09
3268 3519 4.666512 AGGAACCAAACATCAGTGCTTAT 58.333 39.130 0.00 0.00 0.00 1.73
3269 3520 4.702131 AGGAACCAAACATCAGTGCTTATC 59.298 41.667 0.00 0.00 0.00 1.75
3270 3521 4.458989 GGAACCAAACATCAGTGCTTATCA 59.541 41.667 0.00 0.00 0.00 2.15
3271 3522 5.126061 GGAACCAAACATCAGTGCTTATCAT 59.874 40.000 0.00 0.00 0.00 2.45
3276 3527 2.223805 ACATCAGTGCTTATCATCGCGA 60.224 45.455 13.09 13.09 0.00 5.87
3277 3528 2.800881 TCAGTGCTTATCATCGCGAT 57.199 45.000 17.62 17.62 38.21 4.58
3278 3529 2.397549 TCAGTGCTTATCATCGCGATG 58.602 47.619 37.19 37.19 40.09 3.84
3279 3530 1.136419 CAGTGCTTATCATCGCGATGC 60.136 52.381 37.84 27.89 38.65 3.91
3280 3531 0.164647 GTGCTTATCATCGCGATGCC 59.835 55.000 37.84 23.76 38.65 4.40
3281 3532 0.249826 TGCTTATCATCGCGATGCCA 60.250 50.000 37.84 26.32 38.65 4.92
3282 3533 1.081892 GCTTATCATCGCGATGCCAT 58.918 50.000 37.84 29.41 38.65 4.40
3283 3534 1.201998 GCTTATCATCGCGATGCCATG 60.202 52.381 37.84 28.00 38.65 3.66
3284 3535 0.798159 TTATCATCGCGATGCCATGC 59.202 50.000 37.84 0.00 38.65 4.06
3285 3536 0.320596 TATCATCGCGATGCCATGCA 60.321 50.000 37.84 23.42 44.86 3.96
3286 3537 1.848932 ATCATCGCGATGCCATGCAC 61.849 55.000 37.84 0.00 43.04 4.57
3287 3538 2.514360 ATCGCGATGCCATGCACA 60.514 55.556 23.04 0.00 43.04 4.57
3288 3539 1.895231 ATCGCGATGCCATGCACAT 60.895 52.632 23.04 0.00 43.04 3.21
3289 3540 1.449726 ATCGCGATGCCATGCACATT 61.450 50.000 23.04 0.00 43.04 2.71
3290 3541 1.656263 CGCGATGCCATGCACATTC 60.656 57.895 0.00 0.00 43.04 2.67
3421 3675 3.073678 TGTAAGCAGGCTTGTGTACATG 58.926 45.455 16.37 0.00 37.47 3.21
3635 3899 2.254546 TTTCTTGCTTTCCTCGCTGA 57.745 45.000 0.00 0.00 0.00 4.26
3644 3908 2.014335 TTCCTCGCTGATGACATGTG 57.986 50.000 1.15 0.00 0.00 3.21
3649 3913 0.179207 CGCTGATGACATGTGTGCAC 60.179 55.000 10.75 10.75 0.00 4.57
3768 4036 7.754924 TGTCAATCTTCAACTTTCTTGTTTCAC 59.245 33.333 0.00 0.00 0.00 3.18
3780 4048 6.524101 TTCTTGTTTCACACTAGCCTTTTT 57.476 33.333 0.00 0.00 0.00 1.94
3795 4063 3.389221 CCTTTTTGGTCAAAATGTCGGG 58.611 45.455 9.32 4.75 39.69 5.14
3854 4525 3.004734 CCTGCCAAGTTTCAACTTCGAAT 59.995 43.478 0.00 0.00 45.65 3.34
3892 4582 9.028284 TGGAATCTAAGAGAAAGCAATTTCAAT 57.972 29.630 3.78 0.00 33.53 2.57
3918 4608 1.543802 TCGTGCCACCAAATTCCAATC 59.456 47.619 0.00 0.00 0.00 2.67
3947 4637 1.126846 CGACCAAAGCGATGACTGAAC 59.873 52.381 0.00 0.00 0.00 3.18
3949 4639 2.146342 ACCAAAGCGATGACTGAACTG 58.854 47.619 0.00 0.00 0.00 3.16
3974 4664 8.128582 TGGATCTTTGAATTTAACGCATCATAC 58.871 33.333 0.00 0.00 0.00 2.39
4031 4722 8.010733 TCTCAAAATTTCTCCAAATGTTGACT 57.989 30.769 8.40 0.00 45.50 3.41
4078 4769 5.828328 CCTTAGGTGAGATAATTTTCCCCAC 59.172 44.000 9.16 9.16 0.00 4.61
4098 4789 5.923684 CCCACCAACATAACACATGTTAAAC 59.076 40.000 8.47 0.00 42.93 2.01
4109 4800 4.062293 CACATGTTAAACGACTCCTTCCA 58.938 43.478 0.00 0.00 0.00 3.53
4123 4814 3.944015 CTCCTTCCAGCAGACTAAAATGG 59.056 47.826 0.00 0.00 0.00 3.16
4127 4818 5.338381 CCTTCCAGCAGACTAAAATGGTCTA 60.338 44.000 0.00 0.00 41.45 2.59
4128 4819 5.957771 TCCAGCAGACTAAAATGGTCTAT 57.042 39.130 0.00 0.00 41.45 1.98
4177 4871 8.125978 TCCGGTCATAATATATTACGAAACCT 57.874 34.615 7.34 0.00 0.00 3.50
4207 4901 4.752661 TTACATACCCGCAAAACAACTC 57.247 40.909 0.00 0.00 0.00 3.01
4227 4921 4.078630 ACTCCCCATGGCAAACCTATTTAT 60.079 41.667 6.09 0.00 36.63 1.40
4234 4928 7.004086 CCATGGCAAACCTATTTATAAGAGGA 58.996 38.462 17.99 0.63 36.63 3.71
4340 5046 3.338249 ACATTCTCCAGAAACATCACCG 58.662 45.455 0.00 0.00 37.61 4.94
4374 5080 6.316890 TCAATATGACACATGTGACCAAGATG 59.683 38.462 31.94 22.54 0.00 2.90
4394 5100 7.116075 AGATGAAGGAAAGAGAGAGAGAATG 57.884 40.000 0.00 0.00 0.00 2.67
4432 5138 3.958147 TCCTTGTTTCCTTTCCACTTTCC 59.042 43.478 0.00 0.00 0.00 3.13
4433 5139 3.960755 CCTTGTTTCCTTTCCACTTTCCT 59.039 43.478 0.00 0.00 0.00 3.36
4435 5141 4.519906 TGTTTCCTTTCCACTTTCCTCT 57.480 40.909 0.00 0.00 0.00 3.69
4436 5142 4.461198 TGTTTCCTTTCCACTTTCCTCTC 58.539 43.478 0.00 0.00 0.00 3.20
4438 5144 4.788925 TTCCTTTCCACTTTCCTCTCAA 57.211 40.909 0.00 0.00 0.00 3.02
4439 5145 4.086706 TCCTTTCCACTTTCCTCTCAAC 57.913 45.455 0.00 0.00 0.00 3.18
4440 5146 3.458118 TCCTTTCCACTTTCCTCTCAACA 59.542 43.478 0.00 0.00 0.00 3.33
4441 5147 3.817647 CCTTTCCACTTTCCTCTCAACAG 59.182 47.826 0.00 0.00 0.00 3.16
4442 5148 2.550830 TCCACTTTCCTCTCAACAGC 57.449 50.000 0.00 0.00 0.00 4.40
4443 5149 1.072331 TCCACTTTCCTCTCAACAGCC 59.928 52.381 0.00 0.00 0.00 4.85
4515 5225 2.817258 TGAGGGAATAAACGTTGCTTGG 59.183 45.455 0.00 0.00 0.00 3.61
4522 5232 1.319614 AAACGTTGCTTGGCACACCT 61.320 50.000 0.00 0.00 38.71 4.00
4563 5273 3.119602 CCCTCACTCACAAATCAATGCTG 60.120 47.826 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.036475 TCGCTTTTTATTTTGCCCTGCA 59.964 40.909 0.00 0.00 36.47 4.41
6 7 2.667969 CTCGCTTTTTATTTTGCCCTGC 59.332 45.455 0.00 0.00 0.00 4.85
7 8 3.920412 GTCTCGCTTTTTATTTTGCCCTG 59.080 43.478 0.00 0.00 0.00 4.45
8 9 3.572255 TGTCTCGCTTTTTATTTTGCCCT 59.428 39.130 0.00 0.00 0.00 5.19
9 10 3.908213 TGTCTCGCTTTTTATTTTGCCC 58.092 40.909 0.00 0.00 0.00 5.36
10 11 4.742659 TGTTGTCTCGCTTTTTATTTTGCC 59.257 37.500 0.00 0.00 0.00 4.52
11 12 5.458779 ACTGTTGTCTCGCTTTTTATTTTGC 59.541 36.000 0.00 0.00 0.00 3.68
12 13 7.112984 GGTACTGTTGTCTCGCTTTTTATTTTG 59.887 37.037 0.00 0.00 0.00 2.44
13 14 7.136772 GGTACTGTTGTCTCGCTTTTTATTTT 58.863 34.615 0.00 0.00 0.00 1.82
14 15 6.565247 CGGTACTGTTGTCTCGCTTTTTATTT 60.565 38.462 0.00 0.00 0.00 1.40
15 16 5.107220 CGGTACTGTTGTCTCGCTTTTTATT 60.107 40.000 0.00 0.00 0.00 1.40
16 17 4.387862 CGGTACTGTTGTCTCGCTTTTTAT 59.612 41.667 0.00 0.00 0.00 1.40
17 18 3.737266 CGGTACTGTTGTCTCGCTTTTTA 59.263 43.478 0.00 0.00 0.00 1.52
18 19 2.542595 CGGTACTGTTGTCTCGCTTTTT 59.457 45.455 0.00 0.00 0.00 1.94
19 20 2.132762 CGGTACTGTTGTCTCGCTTTT 58.867 47.619 0.00 0.00 0.00 2.27
20 21 1.068127 ACGGTACTGTTGTCTCGCTTT 59.932 47.619 0.04 0.00 0.00 3.51
21 22 0.672342 ACGGTACTGTTGTCTCGCTT 59.328 50.000 0.04 0.00 0.00 4.68
22 23 1.198637 GTACGGTACTGTTGTCTCGCT 59.801 52.381 13.66 0.00 0.00 4.93
23 24 1.069022 TGTACGGTACTGTTGTCTCGC 60.069 52.381 13.66 0.00 0.00 5.03
24 25 2.975410 TGTACGGTACTGTTGTCTCG 57.025 50.000 13.66 0.00 0.00 4.04
25 26 2.975851 CGTTGTACGGTACTGTTGTCTC 59.024 50.000 13.66 0.27 38.08 3.36
26 27 2.618241 TCGTTGTACGGTACTGTTGTCT 59.382 45.455 13.66 0.00 42.81 3.41
27 28 2.721090 GTCGTTGTACGGTACTGTTGTC 59.279 50.000 13.66 5.16 42.81 3.18
28 29 2.098934 TGTCGTTGTACGGTACTGTTGT 59.901 45.455 13.66 0.00 42.81 3.32
29 30 2.468777 GTGTCGTTGTACGGTACTGTTG 59.531 50.000 13.66 6.89 42.81 3.33
30 31 2.098934 TGTGTCGTTGTACGGTACTGTT 59.901 45.455 13.66 0.00 42.81 3.16
31 32 1.675483 TGTGTCGTTGTACGGTACTGT 59.325 47.619 18.32 12.92 42.81 3.55
32 33 2.404265 TGTGTCGTTGTACGGTACTG 57.596 50.000 18.32 0.00 42.81 2.74
33 34 2.098934 TGTTGTGTCGTTGTACGGTACT 59.901 45.455 18.32 0.00 42.81 2.73
34 35 2.458951 TGTTGTGTCGTTGTACGGTAC 58.541 47.619 11.33 11.33 42.81 3.34
35 36 2.859526 TGTTGTGTCGTTGTACGGTA 57.140 45.000 0.00 0.00 42.81 4.02
36 37 1.928503 CTTGTTGTGTCGTTGTACGGT 59.071 47.619 0.00 0.00 42.81 4.83
37 38 1.928503 ACTTGTTGTGTCGTTGTACGG 59.071 47.619 0.00 0.00 42.81 4.02
38 39 2.951360 CACTTGTTGTGTCGTTGTACG 58.049 47.619 0.00 0.00 41.53 3.67
52 53 9.988815 GAGGAGACAATATATTATCACACTTGT 57.011 33.333 6.51 0.00 0.00 3.16
53 54 9.429359 GGAGGAGACAATATATTATCACACTTG 57.571 37.037 6.51 0.00 0.00 3.16
54 55 8.307483 CGGAGGAGACAATATATTATCACACTT 58.693 37.037 6.51 0.00 0.00 3.16
55 56 7.831753 CGGAGGAGACAATATATTATCACACT 58.168 38.462 6.51 1.42 0.00 3.55
76 77 5.276915 CGACGATGTGTCTATATATCCGGAG 60.277 48.000 11.34 0.00 45.87 4.63
77 78 4.569564 CGACGATGTGTCTATATATCCGGA 59.430 45.833 6.61 6.61 45.87 5.14
78 79 4.785658 GCGACGATGTGTCTATATATCCGG 60.786 50.000 0.00 0.00 45.87 5.14
79 80 4.201783 TGCGACGATGTGTCTATATATCCG 60.202 45.833 0.00 0.00 45.87 4.18
80 81 5.231265 TGCGACGATGTGTCTATATATCC 57.769 43.478 0.00 0.00 45.87 2.59
81 82 6.541754 GTTGCGACGATGTGTCTATATATC 57.458 41.667 0.00 0.00 45.87 1.63
97 98 1.606350 CCTCGACTCAACGTTGCGAC 61.606 60.000 24.02 16.76 34.70 5.19
98 99 1.371267 CCTCGACTCAACGTTGCGA 60.371 57.895 24.02 22.99 34.70 5.10
99 100 1.606350 GACCTCGACTCAACGTTGCG 61.606 60.000 23.47 19.83 34.70 4.85
100 101 0.318784 AGACCTCGACTCAACGTTGC 60.319 55.000 23.47 8.79 34.70 4.17
101 102 1.787155 CAAGACCTCGACTCAACGTTG 59.213 52.381 22.35 22.35 34.70 4.10
102 103 1.679680 TCAAGACCTCGACTCAACGTT 59.320 47.619 0.00 0.00 34.70 3.99
103 104 1.315690 TCAAGACCTCGACTCAACGT 58.684 50.000 0.00 0.00 34.70 3.99
104 105 2.520979 GATCAAGACCTCGACTCAACG 58.479 52.381 0.00 0.00 0.00 4.10
105 106 2.161808 TCGATCAAGACCTCGACTCAAC 59.838 50.000 0.00 0.00 38.86 3.18
106 107 2.433436 TCGATCAAGACCTCGACTCAA 58.567 47.619 0.00 0.00 38.86 3.02
107 108 2.109425 TCGATCAAGACCTCGACTCA 57.891 50.000 0.00 0.00 38.86 3.41
108 109 2.875933 AGATCGATCAAGACCTCGACTC 59.124 50.000 26.47 0.00 45.63 3.36
109 110 2.875933 GAGATCGATCAAGACCTCGACT 59.124 50.000 26.47 1.56 45.63 4.18
110 111 2.349060 CGAGATCGATCAAGACCTCGAC 60.349 54.545 26.47 0.00 45.63 4.20
111 112 1.867865 CGAGATCGATCAAGACCTCGA 59.132 52.381 26.47 0.00 46.71 4.04
112 113 1.600013 ACGAGATCGATCAAGACCTCG 59.400 52.381 26.47 24.51 46.00 4.63
113 114 2.614520 TGACGAGATCGATCAAGACCTC 59.385 50.000 26.47 13.17 43.02 3.85
114 115 2.356382 GTGACGAGATCGATCAAGACCT 59.644 50.000 26.47 5.20 43.02 3.85
115 116 2.722071 GTGACGAGATCGATCAAGACC 58.278 52.381 26.47 15.65 43.02 3.85
116 117 2.367772 CGTGACGAGATCGATCAAGAC 58.632 52.381 26.47 18.56 43.02 3.01
117 118 1.330829 CCGTGACGAGATCGATCAAGA 59.669 52.381 26.47 3.59 43.02 3.02
118 119 1.064208 ACCGTGACGAGATCGATCAAG 59.936 52.381 26.47 20.49 43.02 3.02
119 120 1.092348 ACCGTGACGAGATCGATCAA 58.908 50.000 26.47 4.61 43.02 2.57
120 121 0.377203 CACCGTGACGAGATCGATCA 59.623 55.000 26.47 4.77 43.02 2.92
121 122 0.930742 GCACCGTGACGAGATCGATC 60.931 60.000 17.91 17.91 43.02 3.69
122 123 1.064296 GCACCGTGACGAGATCGAT 59.936 57.895 6.54 0.00 43.02 3.59
123 124 2.483745 GCACCGTGACGAGATCGA 59.516 61.111 6.54 0.00 43.02 3.59
124 125 2.579787 GGCACCGTGACGAGATCG 60.580 66.667 6.54 0.00 46.33 3.69
131 132 4.025401 CTTTGGCGGCACCGTGAC 62.025 66.667 12.92 0.00 43.94 3.67
132 133 4.243008 TCTTTGGCGGCACCGTGA 62.243 61.111 12.92 4.66 43.94 4.35
133 134 3.726517 CTCTTTGGCGGCACCGTG 61.727 66.667 12.92 2.58 43.94 4.94
143 144 1.971695 GGTTCCGTGCCCTCTTTGG 60.972 63.158 0.00 0.00 0.00 3.28
144 145 2.325082 CGGTTCCGTGCCCTCTTTG 61.325 63.158 2.82 0.00 0.00 2.77
145 146 2.032071 CGGTTCCGTGCCCTCTTT 59.968 61.111 2.82 0.00 0.00 2.52
146 147 4.016706 CCGGTTCCGTGCCCTCTT 62.017 66.667 10.36 0.00 0.00 2.85
168 169 3.912745 AAACCCTAACCGCCGCTGG 62.913 63.158 0.44 0.44 0.00 4.85
169 170 2.359478 AAACCCTAACCGCCGCTG 60.359 61.111 0.00 0.00 0.00 5.18
170 171 2.046604 GAAACCCTAACCGCCGCT 60.047 61.111 0.00 0.00 0.00 5.52
171 172 3.493440 CGAAACCCTAACCGCCGC 61.493 66.667 0.00 0.00 0.00 6.53
172 173 2.816520 CCGAAACCCTAACCGCCG 60.817 66.667 0.00 0.00 0.00 6.46
173 174 2.437180 CCCGAAACCCTAACCGCC 60.437 66.667 0.00 0.00 0.00 6.13
174 175 1.449070 CTCCCGAAACCCTAACCGC 60.449 63.158 0.00 0.00 0.00 5.68
175 176 0.175073 CTCTCCCGAAACCCTAACCG 59.825 60.000 0.00 0.00 0.00 4.44
176 177 0.540454 CCTCTCCCGAAACCCTAACC 59.460 60.000 0.00 0.00 0.00 2.85
177 178 0.540454 CCCTCTCCCGAAACCCTAAC 59.460 60.000 0.00 0.00 0.00 2.34
178 179 0.414629 TCCCTCTCCCGAAACCCTAA 59.585 55.000 0.00 0.00 0.00 2.69
179 180 0.032416 CTCCCTCTCCCGAAACCCTA 60.032 60.000 0.00 0.00 0.00 3.53
180 181 1.306226 CTCCCTCTCCCGAAACCCT 60.306 63.158 0.00 0.00 0.00 4.34
181 182 3.032667 GCTCCCTCTCCCGAAACCC 62.033 68.421 0.00 0.00 0.00 4.11
182 183 2.585153 GCTCCCTCTCCCGAAACC 59.415 66.667 0.00 0.00 0.00 3.27
183 184 2.184579 CGCTCCCTCTCCCGAAAC 59.815 66.667 0.00 0.00 0.00 2.78
184 185 3.075005 CCGCTCCCTCTCCCGAAA 61.075 66.667 0.00 0.00 0.00 3.46
198 199 4.237809 GAATCGAAAGCCCGCCGC 62.238 66.667 0.00 0.00 37.98 6.53
199 200 3.925238 CGAATCGAAAGCCCGCCG 61.925 66.667 0.00 0.00 0.00 6.46
200 201 4.237809 GCGAATCGAAAGCCCGCC 62.238 66.667 6.91 0.00 39.97 6.13
201 202 3.496131 TGCGAATCGAAAGCCCGC 61.496 61.111 6.91 11.42 45.28 6.13
202 203 2.399611 GTGCGAATCGAAAGCCCG 59.600 61.111 6.91 0.47 0.00 6.13
203 204 2.399611 CGTGCGAATCGAAAGCCC 59.600 61.111 6.91 0.00 0.00 5.19
204 205 2.399611 CCGTGCGAATCGAAAGCC 59.600 61.111 6.91 0.00 0.00 4.35
205 206 2.399611 CCCGTGCGAATCGAAAGC 59.600 61.111 6.91 0.00 0.00 3.51
206 207 2.399611 GCCCGTGCGAATCGAAAG 59.600 61.111 6.91 0.00 0.00 2.62
223 224 2.325082 AAACTTGCTGCCTACCGCG 61.325 57.895 0.00 0.00 42.08 6.46
224 225 1.210155 CAAACTTGCTGCCTACCGC 59.790 57.895 0.00 0.00 38.31 5.68
225 226 1.586154 CCCAAACTTGCTGCCTACCG 61.586 60.000 0.00 0.00 0.00 4.02
226 227 0.539669 ACCCAAACTTGCTGCCTACC 60.540 55.000 0.00 0.00 0.00 3.18
227 228 1.810755 GTACCCAAACTTGCTGCCTAC 59.189 52.381 0.00 0.00 0.00 3.18
228 229 1.609580 CGTACCCAAACTTGCTGCCTA 60.610 52.381 0.00 0.00 0.00 3.93
229 230 0.889186 CGTACCCAAACTTGCTGCCT 60.889 55.000 0.00 0.00 0.00 4.75
230 231 1.579429 CGTACCCAAACTTGCTGCC 59.421 57.895 0.00 0.00 0.00 4.85
231 232 1.081442 GCGTACCCAAACTTGCTGC 60.081 57.895 0.00 0.00 0.00 5.25
232 233 1.206578 CGCGTACCCAAACTTGCTG 59.793 57.895 0.00 0.00 0.00 4.41
233 234 2.613506 GCGCGTACCCAAACTTGCT 61.614 57.895 8.43 0.00 0.00 3.91
234 235 2.127003 GCGCGTACCCAAACTTGC 60.127 61.111 8.43 0.00 0.00 4.01
235 236 1.582610 ATGGCGCGTACCCAAACTTG 61.583 55.000 8.43 0.00 35.67 3.16
236 237 1.302993 ATGGCGCGTACCCAAACTT 60.303 52.632 8.43 0.00 35.67 2.66
237 238 2.038269 CATGGCGCGTACCCAAACT 61.038 57.895 8.43 0.00 35.67 2.66
238 239 2.483288 CATGGCGCGTACCCAAAC 59.517 61.111 8.43 0.00 35.67 2.93
239 240 2.181445 TACCATGGCGCGTACCCAAA 62.181 55.000 13.04 0.00 35.67 3.28
240 241 2.581208 CTACCATGGCGCGTACCCAA 62.581 60.000 13.04 0.00 35.67 4.12
241 242 3.075641 TACCATGGCGCGTACCCA 61.076 61.111 13.04 7.27 36.66 4.51
242 243 2.279918 CTACCATGGCGCGTACCC 60.280 66.667 13.04 0.00 0.00 3.69
243 244 1.881252 CACTACCATGGCGCGTACC 60.881 63.158 13.04 0.88 0.00 3.34
244 245 0.249322 ATCACTACCATGGCGCGTAC 60.249 55.000 13.04 1.23 0.00 3.67
245 246 0.249280 CATCACTACCATGGCGCGTA 60.249 55.000 13.04 0.00 0.00 4.42
246 247 1.521457 CATCACTACCATGGCGCGT 60.521 57.895 13.04 3.22 0.00 6.01
247 248 1.521457 ACATCACTACCATGGCGCG 60.521 57.895 13.04 0.00 0.00 6.86
248 249 2.016961 CACATCACTACCATGGCGC 58.983 57.895 13.04 0.00 0.00 6.53
249 250 0.744057 TGCACATCACTACCATGGCG 60.744 55.000 13.04 5.80 0.00 5.69
250 251 0.734889 GTGCACATCACTACCATGGC 59.265 55.000 13.04 0.00 42.38 4.40
251 252 1.009078 CGTGCACATCACTACCATGG 58.991 55.000 18.64 11.19 43.46 3.66
252 253 0.374758 GCGTGCACATCACTACCATG 59.625 55.000 18.64 0.00 43.46 3.66
253 254 0.250234 AGCGTGCACATCACTACCAT 59.750 50.000 18.64 0.00 43.46 3.55
254 255 0.389817 GAGCGTGCACATCACTACCA 60.390 55.000 18.64 0.00 43.46 3.25
255 256 0.108615 AGAGCGTGCACATCACTACC 60.109 55.000 18.64 0.00 43.46 3.18
256 257 1.714794 AAGAGCGTGCACATCACTAC 58.285 50.000 18.64 0.63 43.46 2.73
257 258 3.801114 ATAAGAGCGTGCACATCACTA 57.199 42.857 18.64 9.84 43.46 2.74
258 259 2.680312 ATAAGAGCGTGCACATCACT 57.320 45.000 18.64 8.03 43.46 3.41
259 260 3.186909 TGTATAAGAGCGTGCACATCAC 58.813 45.455 18.64 8.64 42.23 3.06
260 261 3.518634 TGTATAAGAGCGTGCACATCA 57.481 42.857 18.64 0.00 0.00 3.07
261 262 5.235186 AGAAATGTATAAGAGCGTGCACATC 59.765 40.000 18.64 14.02 0.00 3.06
262 263 5.118990 AGAAATGTATAAGAGCGTGCACAT 58.881 37.500 18.64 4.15 0.00 3.21
263 264 4.503910 AGAAATGTATAAGAGCGTGCACA 58.496 39.130 18.64 0.00 0.00 4.57
264 265 5.470845 AAGAAATGTATAAGAGCGTGCAC 57.529 39.130 6.82 6.82 0.00 4.57
265 266 6.237728 CGTAAAGAAATGTATAAGAGCGTGCA 60.238 38.462 0.00 0.00 0.00 4.57
266 267 6.120812 CGTAAAGAAATGTATAAGAGCGTGC 58.879 40.000 0.00 0.00 0.00 5.34
267 268 6.474427 TCCGTAAAGAAATGTATAAGAGCGTG 59.526 38.462 0.00 0.00 0.00 5.34
268 269 6.567050 TCCGTAAAGAAATGTATAAGAGCGT 58.433 36.000 0.00 0.00 0.00 5.07
269 270 6.144080 CCTCCGTAAAGAAATGTATAAGAGCG 59.856 42.308 0.00 0.00 0.00 5.03
270 271 6.424207 CCCTCCGTAAAGAAATGTATAAGAGC 59.576 42.308 0.00 0.00 0.00 4.09
271 272 7.723324 TCCCTCCGTAAAGAAATGTATAAGAG 58.277 38.462 0.00 0.00 0.00 2.85
272 273 7.343833 ACTCCCTCCGTAAAGAAATGTATAAGA 59.656 37.037 0.00 0.00 0.00 2.10
273 274 7.498443 ACTCCCTCCGTAAAGAAATGTATAAG 58.502 38.462 0.00 0.00 0.00 1.73
274 275 7.427989 ACTCCCTCCGTAAAGAAATGTATAA 57.572 36.000 0.00 0.00 0.00 0.98
275 276 7.560991 TGTACTCCCTCCGTAAAGAAATGTATA 59.439 37.037 0.00 0.00 0.00 1.47
276 277 5.952347 ACTCCCTCCGTAAAGAAATGTAT 57.048 39.130 0.00 0.00 0.00 2.29
277 278 5.716228 TGTACTCCCTCCGTAAAGAAATGTA 59.284 40.000 0.00 0.00 0.00 2.29
278 279 4.529377 TGTACTCCCTCCGTAAAGAAATGT 59.471 41.667 0.00 0.00 0.00 2.71
279 280 5.080969 TGTACTCCCTCCGTAAAGAAATG 57.919 43.478 0.00 0.00 0.00 2.32
280 281 5.485620 GTTGTACTCCCTCCGTAAAGAAAT 58.514 41.667 0.00 0.00 0.00 2.17
281 282 4.262592 GGTTGTACTCCCTCCGTAAAGAAA 60.263 45.833 0.00 0.00 0.00 2.52
282 283 3.259123 GGTTGTACTCCCTCCGTAAAGAA 59.741 47.826 0.00 0.00 0.00 2.52
283 284 2.827921 GGTTGTACTCCCTCCGTAAAGA 59.172 50.000 0.00 0.00 0.00 2.52
284 285 2.416431 CGGTTGTACTCCCTCCGTAAAG 60.416 54.545 0.00 0.00 36.99 1.85
285 286 1.545582 CGGTTGTACTCCCTCCGTAAA 59.454 52.381 0.00 0.00 36.99 2.01
286 287 1.176527 CGGTTGTACTCCCTCCGTAA 58.823 55.000 0.00 0.00 36.99 3.18
287 288 0.327924 TCGGTTGTACTCCCTCCGTA 59.672 55.000 0.00 0.00 41.58 4.02
288 289 0.540365 TTCGGTTGTACTCCCTCCGT 60.540 55.000 0.00 0.00 41.58 4.69
289 290 0.172803 CTTCGGTTGTACTCCCTCCG 59.827 60.000 0.00 0.00 42.12 4.63
290 291 1.204231 GACTTCGGTTGTACTCCCTCC 59.796 57.143 0.00 0.00 0.00 4.30
291 292 1.891150 TGACTTCGGTTGTACTCCCTC 59.109 52.381 0.00 0.00 0.00 4.30
292 293 1.617357 GTGACTTCGGTTGTACTCCCT 59.383 52.381 0.00 0.00 0.00 4.20
293 294 1.617357 AGTGACTTCGGTTGTACTCCC 59.383 52.381 0.00 0.00 0.00 4.30
294 295 2.295349 TGAGTGACTTCGGTTGTACTCC 59.705 50.000 0.00 0.00 35.17 3.85
295 296 3.243301 TGTGAGTGACTTCGGTTGTACTC 60.243 47.826 0.00 0.00 35.86 2.59
296 297 2.691526 TGTGAGTGACTTCGGTTGTACT 59.308 45.455 0.00 0.00 0.00 2.73
297 298 2.793232 GTGTGAGTGACTTCGGTTGTAC 59.207 50.000 0.00 0.00 0.00 2.90
298 299 2.427812 TGTGTGAGTGACTTCGGTTGTA 59.572 45.455 0.00 0.00 0.00 2.41
299 300 1.206132 TGTGTGAGTGACTTCGGTTGT 59.794 47.619 0.00 0.00 0.00 3.32
300 301 1.593006 GTGTGTGAGTGACTTCGGTTG 59.407 52.381 0.00 0.00 0.00 3.77
301 302 1.206132 TGTGTGTGAGTGACTTCGGTT 59.794 47.619 0.00 0.00 0.00 4.44
302 303 0.821517 TGTGTGTGAGTGACTTCGGT 59.178 50.000 0.00 0.00 0.00 4.69
303 304 1.209128 GTGTGTGTGAGTGACTTCGG 58.791 55.000 0.00 0.00 0.00 4.30
304 305 1.588404 GTGTGTGTGTGAGTGACTTCG 59.412 52.381 0.00 0.00 0.00 3.79
305 306 2.616960 TGTGTGTGTGTGAGTGACTTC 58.383 47.619 0.00 0.00 0.00 3.01
306 307 2.760634 TGTGTGTGTGTGAGTGACTT 57.239 45.000 0.00 0.00 0.00 3.01
307 308 2.742053 GTTTGTGTGTGTGTGAGTGACT 59.258 45.455 0.00 0.00 0.00 3.41
308 309 2.473868 CGTTTGTGTGTGTGTGAGTGAC 60.474 50.000 0.00 0.00 0.00 3.67
309 310 1.729517 CGTTTGTGTGTGTGTGAGTGA 59.270 47.619 0.00 0.00 0.00 3.41
310 311 1.729517 TCGTTTGTGTGTGTGTGAGTG 59.270 47.619 0.00 0.00 0.00 3.51
311 312 1.999735 CTCGTTTGTGTGTGTGTGAGT 59.000 47.619 0.00 0.00 0.00 3.41
312 313 1.267532 GCTCGTTTGTGTGTGTGTGAG 60.268 52.381 0.00 0.00 0.00 3.51
313 314 0.724549 GCTCGTTTGTGTGTGTGTGA 59.275 50.000 0.00 0.00 0.00 3.58
314 315 0.445829 TGCTCGTTTGTGTGTGTGTG 59.554 50.000 0.00 0.00 0.00 3.82
315 316 1.378531 ATGCTCGTTTGTGTGTGTGT 58.621 45.000 0.00 0.00 0.00 3.72
316 317 2.286563 TGTATGCTCGTTTGTGTGTGTG 59.713 45.455 0.00 0.00 0.00 3.82
317 318 2.286833 GTGTATGCTCGTTTGTGTGTGT 59.713 45.455 0.00 0.00 0.00 3.72
318 319 2.543848 AGTGTATGCTCGTTTGTGTGTG 59.456 45.455 0.00 0.00 0.00 3.82
319 320 2.800544 GAGTGTATGCTCGTTTGTGTGT 59.199 45.455 0.00 0.00 0.00 3.72
320 321 2.799978 TGAGTGTATGCTCGTTTGTGTG 59.200 45.455 0.00 0.00 38.28 3.82
321 322 3.106242 TGAGTGTATGCTCGTTTGTGT 57.894 42.857 0.00 0.00 38.28 3.72
322 323 3.062639 GGATGAGTGTATGCTCGTTTGTG 59.937 47.826 0.00 0.00 38.28 3.33
323 324 3.055819 AGGATGAGTGTATGCTCGTTTGT 60.056 43.478 0.00 0.00 38.28 2.83
324 325 3.525537 AGGATGAGTGTATGCTCGTTTG 58.474 45.455 0.00 0.00 38.28 2.93
325 326 3.895232 AGGATGAGTGTATGCTCGTTT 57.105 42.857 0.00 0.00 38.28 3.60
326 327 3.895232 AAGGATGAGTGTATGCTCGTT 57.105 42.857 0.00 0.00 38.28 3.85
327 328 3.699538 TGTAAGGATGAGTGTATGCTCGT 59.300 43.478 0.00 0.00 38.28 4.18
328 329 4.307443 TGTAAGGATGAGTGTATGCTCG 57.693 45.455 0.00 0.00 38.28 5.03
329 330 6.512415 GCATTTGTAAGGATGAGTGTATGCTC 60.512 42.308 0.00 0.00 33.70 4.26
330 331 5.297776 GCATTTGTAAGGATGAGTGTATGCT 59.702 40.000 0.00 0.00 33.70 3.79
331 332 5.066375 TGCATTTGTAAGGATGAGTGTATGC 59.934 40.000 0.00 0.00 36.21 3.14
332 333 6.489675 GTGCATTTGTAAGGATGAGTGTATG 58.510 40.000 0.00 0.00 0.00 2.39
333 334 5.294306 CGTGCATTTGTAAGGATGAGTGTAT 59.706 40.000 0.00 0.00 0.00 2.29
334 335 4.629634 CGTGCATTTGTAAGGATGAGTGTA 59.370 41.667 0.00 0.00 0.00 2.90
335 336 3.436704 CGTGCATTTGTAAGGATGAGTGT 59.563 43.478 0.00 0.00 0.00 3.55
336 337 3.728864 GCGTGCATTTGTAAGGATGAGTG 60.729 47.826 0.00 0.00 0.00 3.51
337 338 2.420022 GCGTGCATTTGTAAGGATGAGT 59.580 45.455 0.00 0.00 0.00 3.41
338 339 2.537529 CGCGTGCATTTGTAAGGATGAG 60.538 50.000 0.00 0.00 0.00 2.90
339 340 1.396648 CGCGTGCATTTGTAAGGATGA 59.603 47.619 0.00 0.00 0.00 2.92
340 341 1.813896 CGCGTGCATTTGTAAGGATG 58.186 50.000 0.00 0.00 0.00 3.51
341 342 0.098728 GCGCGTGCATTTGTAAGGAT 59.901 50.000 17.66 0.00 42.15 3.24
342 343 1.499949 GCGCGTGCATTTGTAAGGA 59.500 52.632 17.66 0.00 42.15 3.36
343 344 1.863012 CGCGCGTGCATTTGTAAGG 60.863 57.895 24.19 0.00 42.97 2.69
344 345 2.487967 GCGCGCGTGCATTTGTAAG 61.488 57.895 37.29 2.62 42.97 2.34
345 346 2.500795 GCGCGCGTGCATTTGTAA 60.501 55.556 37.29 0.00 42.97 2.41
346 347 4.785569 CGCGCGCGTGCATTTGTA 62.786 61.111 42.49 0.00 42.97 2.41
356 357 2.768920 GAGATATAGTGCGCGCGCG 61.769 63.158 45.73 45.73 45.51 6.86
357 358 0.179197 TAGAGATATAGTGCGCGCGC 60.179 55.000 45.02 45.02 42.35 6.86
358 359 2.460243 ATAGAGATATAGTGCGCGCG 57.540 50.000 28.44 28.44 0.00 6.86
359 360 5.118664 TCAAAAATAGAGATATAGTGCGCGC 59.881 40.000 27.26 27.26 0.00 6.86
360 361 6.517597 GTCAAAAATAGAGATATAGTGCGCG 58.482 40.000 0.00 0.00 0.00 6.86
361 362 6.362551 TCGTCAAAAATAGAGATATAGTGCGC 59.637 38.462 0.00 0.00 0.00 6.09
362 363 7.853377 TCGTCAAAAATAGAGATATAGTGCG 57.147 36.000 0.00 0.00 0.00 5.34
363 364 9.250624 ACTTCGTCAAAAATAGAGATATAGTGC 57.749 33.333 0.00 0.00 0.00 4.40
369 370 9.042008 GCCATAACTTCGTCAAAAATAGAGATA 57.958 33.333 0.00 0.00 0.00 1.98
370 371 7.254455 CGCCATAACTTCGTCAAAAATAGAGAT 60.254 37.037 0.00 0.00 0.00 2.75
371 372 6.035650 CGCCATAACTTCGTCAAAAATAGAGA 59.964 38.462 0.00 0.00 0.00 3.10
372 373 6.183360 ACGCCATAACTTCGTCAAAAATAGAG 60.183 38.462 0.00 0.00 0.00 2.43
373 374 5.640357 ACGCCATAACTTCGTCAAAAATAGA 59.360 36.000 0.00 0.00 0.00 1.98
374 375 5.732647 CACGCCATAACTTCGTCAAAAATAG 59.267 40.000 0.00 0.00 33.84 1.73
375 376 5.623335 CACGCCATAACTTCGTCAAAAATA 58.377 37.500 0.00 0.00 33.84 1.40
376 377 4.472286 CACGCCATAACTTCGTCAAAAAT 58.528 39.130 0.00 0.00 33.84 1.82
377 378 3.850374 GCACGCCATAACTTCGTCAAAAA 60.850 43.478 0.00 0.00 33.84 1.94
378 379 2.350007 GCACGCCATAACTTCGTCAAAA 60.350 45.455 0.00 0.00 33.84 2.44
379 380 1.195900 GCACGCCATAACTTCGTCAAA 59.804 47.619 0.00 0.00 33.84 2.69
380 381 0.793861 GCACGCCATAACTTCGTCAA 59.206 50.000 0.00 0.00 33.84 3.18
381 382 1.348538 CGCACGCCATAACTTCGTCA 61.349 55.000 0.00 0.00 33.84 4.35
382 383 1.343821 CGCACGCCATAACTTCGTC 59.656 57.895 0.00 0.00 33.84 4.20
383 384 2.736682 GCGCACGCCATAACTTCGT 61.737 57.895 0.30 0.00 36.84 3.85
384 385 2.021380 GCGCACGCCATAACTTCG 59.979 61.111 0.30 0.00 34.56 3.79
385 386 0.793104 GTTGCGCACGCCATAACTTC 60.793 55.000 11.12 0.00 41.09 3.01
386 387 1.209127 GTTGCGCACGCCATAACTT 59.791 52.632 11.12 0.00 41.09 2.66
387 388 1.305219 ATGTTGCGCACGCCATAACT 61.305 50.000 11.12 0.00 41.09 2.24
388 389 0.861450 GATGTTGCGCACGCCATAAC 60.861 55.000 11.12 3.95 41.09 1.89
389 390 1.427419 GATGTTGCGCACGCCATAA 59.573 52.632 11.12 0.00 41.09 1.90
390 391 2.807906 CGATGTTGCGCACGCCATA 61.808 57.895 11.12 0.00 41.09 2.74
391 392 4.164664 CGATGTTGCGCACGCCAT 62.165 61.111 11.12 13.17 41.09 4.40
399 400 1.705337 ATCTTTCCGGCGATGTTGCG 61.705 55.000 9.30 0.00 35.06 4.85
400 401 0.451783 AATCTTTCCGGCGATGTTGC 59.548 50.000 9.30 0.00 0.00 4.17
401 402 3.194861 TCTAATCTTTCCGGCGATGTTG 58.805 45.455 9.30 0.00 0.00 3.33
402 403 3.536956 TCTAATCTTTCCGGCGATGTT 57.463 42.857 9.30 0.00 0.00 2.71
403 404 3.536956 TTCTAATCTTTCCGGCGATGT 57.463 42.857 9.30 0.00 0.00 3.06
404 405 6.539649 TTTATTCTAATCTTTCCGGCGATG 57.460 37.500 9.30 0.00 0.00 3.84
405 406 6.371825 GGATTTATTCTAATCTTTCCGGCGAT 59.628 38.462 9.30 0.00 35.37 4.58
406 407 5.699458 GGATTTATTCTAATCTTTCCGGCGA 59.301 40.000 9.30 0.00 35.37 5.54
407 408 5.468746 TGGATTTATTCTAATCTTTCCGGCG 59.531 40.000 0.00 0.00 35.37 6.46
408 409 6.710744 TCTGGATTTATTCTAATCTTTCCGGC 59.289 38.462 0.00 0.00 35.37 6.13
409 410 8.677148 TTCTGGATTTATTCTAATCTTTCCGG 57.323 34.615 0.00 0.00 35.37 5.14
434 435 5.244755 ACAAAACATTGGTGCTCACTTTTT 58.755 33.333 0.00 0.00 0.00 1.94
435 436 4.831107 ACAAAACATTGGTGCTCACTTTT 58.169 34.783 0.00 0.00 0.00 2.27
436 437 4.432712 GACAAAACATTGGTGCTCACTTT 58.567 39.130 0.00 0.00 0.00 2.66
437 438 3.181476 GGACAAAACATTGGTGCTCACTT 60.181 43.478 0.00 0.00 0.00 3.16
438 439 2.362077 GGACAAAACATTGGTGCTCACT 59.638 45.455 0.00 0.00 0.00 3.41
439 440 2.100584 TGGACAAAACATTGGTGCTCAC 59.899 45.455 0.00 0.00 0.00 3.51
440 441 2.382882 TGGACAAAACATTGGTGCTCA 58.617 42.857 0.00 0.00 0.00 4.26
441 442 3.005684 TCATGGACAAAACATTGGTGCTC 59.994 43.478 0.00 0.00 0.00 4.26
442 443 2.964464 TCATGGACAAAACATTGGTGCT 59.036 40.909 0.00 0.00 0.00 4.40
443 444 3.059166 GTCATGGACAAAACATTGGTGC 58.941 45.455 0.00 0.00 32.09 5.01
444 445 4.589216 AGTCATGGACAAAACATTGGTG 57.411 40.909 0.00 0.00 34.60 4.17
445 446 4.648762 TCAAGTCATGGACAAAACATTGGT 59.351 37.500 0.00 0.00 34.60 3.67
446 447 5.199024 TCAAGTCATGGACAAAACATTGG 57.801 39.130 0.00 0.00 34.60 3.16
447 448 4.682860 GCTCAAGTCATGGACAAAACATTG 59.317 41.667 0.00 0.00 34.60 2.82
448 449 4.262164 GGCTCAAGTCATGGACAAAACATT 60.262 41.667 0.00 0.00 34.60 2.71
449 450 3.256631 GGCTCAAGTCATGGACAAAACAT 59.743 43.478 0.00 0.00 34.60 2.71
450 451 2.622942 GGCTCAAGTCATGGACAAAACA 59.377 45.455 0.00 0.00 34.60 2.83
451 452 2.029918 GGGCTCAAGTCATGGACAAAAC 60.030 50.000 0.00 0.00 34.60 2.43
452 453 2.158475 AGGGCTCAAGTCATGGACAAAA 60.158 45.455 0.00 0.00 34.60 2.44
453 454 1.425066 AGGGCTCAAGTCATGGACAAA 59.575 47.619 0.00 0.00 34.60 2.83
454 455 1.003580 GAGGGCTCAAGTCATGGACAA 59.996 52.381 0.00 0.00 34.60 3.18
455 456 0.615331 GAGGGCTCAAGTCATGGACA 59.385 55.000 0.00 0.00 34.60 4.02
456 457 0.460987 CGAGGGCTCAAGTCATGGAC 60.461 60.000 0.00 0.00 0.00 4.02
457 458 0.904865 ACGAGGGCTCAAGTCATGGA 60.905 55.000 0.00 0.00 0.00 3.41
458 459 0.742281 CACGAGGGCTCAAGTCATGG 60.742 60.000 0.00 0.00 0.00 3.66
459 460 0.742281 CCACGAGGGCTCAAGTCATG 60.742 60.000 0.00 0.00 0.00 3.07
460 461 1.599047 CCACGAGGGCTCAAGTCAT 59.401 57.895 0.00 0.00 0.00 3.06
461 462 3.059982 CCACGAGGGCTCAAGTCA 58.940 61.111 0.00 0.00 0.00 3.41
471 472 1.831652 GATATCCCCAGCCCACGAGG 61.832 65.000 0.00 0.00 39.47 4.63
472 473 1.121407 TGATATCCCCAGCCCACGAG 61.121 60.000 0.00 0.00 0.00 4.18
473 474 1.074850 TGATATCCCCAGCCCACGA 60.075 57.895 0.00 0.00 0.00 4.35
474 475 1.071471 GTGATATCCCCAGCCCACG 59.929 63.158 0.00 0.00 0.00 4.94
475 476 1.071471 CGTGATATCCCCAGCCCAC 59.929 63.158 0.00 0.00 0.00 4.61
476 477 2.146724 CCGTGATATCCCCAGCCCA 61.147 63.158 0.00 0.00 0.00 5.36
477 478 2.750350 CCGTGATATCCCCAGCCC 59.250 66.667 0.00 0.00 0.00 5.19
478 479 2.032681 GCCGTGATATCCCCAGCC 59.967 66.667 0.00 0.00 0.00 4.85
479 480 1.302033 CAGCCGTGATATCCCCAGC 60.302 63.158 0.00 0.00 0.00 4.85
480 481 1.372683 CCAGCCGTGATATCCCCAG 59.627 63.158 0.00 0.00 0.00 4.45
481 482 2.146724 CCCAGCCGTGATATCCCCA 61.147 63.158 0.00 0.00 0.00 4.96
482 483 2.750350 CCCAGCCGTGATATCCCC 59.250 66.667 0.00 0.00 0.00 4.81
483 484 2.032681 GCCCAGCCGTGATATCCC 59.967 66.667 0.00 0.00 0.00 3.85
484 485 2.357517 CGCCCAGCCGTGATATCC 60.358 66.667 0.00 0.00 0.00 2.59
485 486 1.664965 GACGCCCAGCCGTGATATC 60.665 63.158 0.00 0.00 42.24 1.63
486 487 2.421739 GACGCCCAGCCGTGATAT 59.578 61.111 0.00 0.00 42.24 1.63
487 488 3.845259 GGACGCCCAGCCGTGATA 61.845 66.667 0.00 0.00 42.24 2.15
498 499 4.424711 TTGGATGGCCAGGACGCC 62.425 66.667 13.05 7.99 46.91 5.68
499 500 2.825836 CTTGGATGGCCAGGACGC 60.826 66.667 13.05 0.00 46.91 5.19
500 501 2.825836 GCTTGGATGGCCAGGACG 60.826 66.667 13.05 0.00 46.91 4.79
501 502 0.899717 TTTGCTTGGATGGCCAGGAC 60.900 55.000 13.05 4.14 46.91 3.85
502 503 0.899717 GTTTGCTTGGATGGCCAGGA 60.900 55.000 13.05 0.00 46.91 3.86
503 504 0.901580 AGTTTGCTTGGATGGCCAGG 60.902 55.000 13.05 0.00 46.91 4.45
504 505 0.971386 AAGTTTGCTTGGATGGCCAG 59.029 50.000 13.05 0.00 46.91 4.85
505 506 0.680618 CAAGTTTGCTTGGATGGCCA 59.319 50.000 8.56 8.56 46.17 5.36
506 507 3.520187 CAAGTTTGCTTGGATGGCC 57.480 52.632 0.00 0.00 46.17 5.36
514 515 0.819259 TCTGCGAGCCAAGTTTGCTT 60.819 50.000 2.55 0.00 39.69 3.91
515 516 0.607489 ATCTGCGAGCCAAGTTTGCT 60.607 50.000 0.14 0.14 43.03 3.91
516 517 0.455633 CATCTGCGAGCCAAGTTTGC 60.456 55.000 0.00 0.00 0.00 3.68
517 518 0.169672 CCATCTGCGAGCCAAGTTTG 59.830 55.000 0.00 0.00 0.00 2.93
518 519 0.962356 CCCATCTGCGAGCCAAGTTT 60.962 55.000 0.00 0.00 0.00 2.66
519 520 1.377725 CCCATCTGCGAGCCAAGTT 60.378 57.895 0.00 0.00 0.00 2.66
520 521 1.630126 ATCCCATCTGCGAGCCAAGT 61.630 55.000 0.00 0.00 0.00 3.16
521 522 0.465097 AATCCCATCTGCGAGCCAAG 60.465 55.000 0.00 0.00 0.00 3.61
522 523 0.836606 TAATCCCATCTGCGAGCCAA 59.163 50.000 0.00 0.00 0.00 4.52
523 524 0.836606 TTAATCCCATCTGCGAGCCA 59.163 50.000 0.00 0.00 0.00 4.75
524 525 1.876156 CTTTAATCCCATCTGCGAGCC 59.124 52.381 0.00 0.00 0.00 4.70
525 526 1.876156 CCTTTAATCCCATCTGCGAGC 59.124 52.381 0.00 0.00 0.00 5.03
526 527 3.199880 ACCTTTAATCCCATCTGCGAG 57.800 47.619 0.00 0.00 0.00 5.03
527 528 3.644966 AACCTTTAATCCCATCTGCGA 57.355 42.857 0.00 0.00 0.00 5.10
528 529 4.157656 TCAAAACCTTTAATCCCATCTGCG 59.842 41.667 0.00 0.00 0.00 5.18
529 530 5.185828 ACTCAAAACCTTTAATCCCATCTGC 59.814 40.000 0.00 0.00 0.00 4.26
530 531 6.840780 ACTCAAAACCTTTAATCCCATCTG 57.159 37.500 0.00 0.00 0.00 2.90
531 532 7.699878 ACTACTCAAAACCTTTAATCCCATCT 58.300 34.615 0.00 0.00 0.00 2.90
532 533 7.939784 ACTACTCAAAACCTTTAATCCCATC 57.060 36.000 0.00 0.00 0.00 3.51
541 542 8.903820 GCCATTGATATACTACTCAAAACCTTT 58.096 33.333 0.00 0.00 35.20 3.11
542 543 8.275040 AGCCATTGATATACTACTCAAAACCTT 58.725 33.333 0.00 0.00 35.20 3.50
543 544 7.806180 AGCCATTGATATACTACTCAAAACCT 58.194 34.615 0.00 0.00 35.20 3.50
544 545 7.173390 GGAGCCATTGATATACTACTCAAAACC 59.827 40.741 0.00 0.00 35.20 3.27
545 546 7.173390 GGGAGCCATTGATATACTACTCAAAAC 59.827 40.741 0.00 0.00 35.20 2.43
546 547 7.224297 GGGAGCCATTGATATACTACTCAAAA 58.776 38.462 0.00 0.00 35.20 2.44
547 548 6.518369 CGGGAGCCATTGATATACTACTCAAA 60.518 42.308 0.00 0.00 35.20 2.69
548 549 5.047306 CGGGAGCCATTGATATACTACTCAA 60.047 44.000 0.00 0.00 35.95 3.02
549 550 4.462834 CGGGAGCCATTGATATACTACTCA 59.537 45.833 0.00 0.00 0.00 3.41
550 551 4.463186 ACGGGAGCCATTGATATACTACTC 59.537 45.833 0.00 0.00 0.00 2.59
551 552 4.220821 CACGGGAGCCATTGATATACTACT 59.779 45.833 0.00 0.00 0.00 2.57
552 553 4.495422 CACGGGAGCCATTGATATACTAC 58.505 47.826 0.00 0.00 0.00 2.73
553 554 3.056107 GCACGGGAGCCATTGATATACTA 60.056 47.826 0.00 0.00 0.00 1.82
587 588 1.405933 GGAATTTGGATTGGTGGCTGC 60.406 52.381 0.00 0.00 0.00 5.25
590 591 0.541392 GGGGAATTTGGATTGGTGGC 59.459 55.000 0.00 0.00 0.00 5.01
600 601 0.904649 GGCAAGGGAAGGGGAATTTG 59.095 55.000 0.00 0.00 0.00 2.32
717 729 1.968703 GACGAGACGAGACGAGGTGG 61.969 65.000 0.00 0.00 0.00 4.61
719 731 0.737019 GAGACGAGACGAGACGAGGT 60.737 60.000 0.00 0.00 0.00 3.85
721 733 1.626905 CGAGACGAGACGAGACGAG 59.373 63.158 0.00 0.00 0.00 4.18
722 734 2.442999 GCGAGACGAGACGAGACGA 61.443 63.158 0.00 0.00 0.00 4.20
723 735 2.020287 GCGAGACGAGACGAGACG 59.980 66.667 0.00 0.00 0.00 4.18
745 757 3.878667 GCGCTGGGGATAAGGCCT 61.879 66.667 0.00 0.00 0.00 5.19
829 860 0.252513 TCCAAATCGGGGAGTGGAGA 60.253 55.000 0.00 0.00 35.22 3.71
834 865 2.092375 GGAAGAATCCAAATCGGGGAGT 60.092 50.000 0.00 0.00 45.79 3.85
836 867 1.134220 CGGAAGAATCCAAATCGGGGA 60.134 52.381 0.00 0.00 46.97 4.81
962 1017 3.123804 GGTGTGGTAGCGTATGAATCAG 58.876 50.000 0.00 0.00 0.00 2.90
964 1019 3.173668 TGGTGTGGTAGCGTATGAATC 57.826 47.619 0.00 0.00 0.00 2.52
984 1042 2.696707 TCGTGGTCTGTTGGTAGTTCTT 59.303 45.455 0.00 0.00 0.00 2.52
986 1044 2.673833 CTCGTGGTCTGTTGGTAGTTC 58.326 52.381 0.00 0.00 0.00 3.01
987 1045 1.270147 GCTCGTGGTCTGTTGGTAGTT 60.270 52.381 0.00 0.00 0.00 2.24
1002 1060 2.983930 AAGAAGCTCGCTCGCTCGT 61.984 57.895 0.00 0.00 39.86 4.18
1028 1086 3.077359 GCAGGAAGATGATAAATCCGGG 58.923 50.000 0.00 0.00 37.05 5.73
1032 1090 3.823304 GGTGGGCAGGAAGATGATAAATC 59.177 47.826 0.00 0.00 0.00 2.17
1033 1091 3.437052 GGGTGGGCAGGAAGATGATAAAT 60.437 47.826 0.00 0.00 0.00 1.40
1034 1092 2.091885 GGGTGGGCAGGAAGATGATAAA 60.092 50.000 0.00 0.00 0.00 1.40
1035 1093 1.494721 GGGTGGGCAGGAAGATGATAA 59.505 52.381 0.00 0.00 0.00 1.75
1037 1095 0.920763 TGGGTGGGCAGGAAGATGAT 60.921 55.000 0.00 0.00 0.00 2.45
1038 1096 1.541118 TGGGTGGGCAGGAAGATGA 60.541 57.895 0.00 0.00 0.00 2.92
1039 1097 1.077212 CTGGGTGGGCAGGAAGATG 60.077 63.158 0.00 0.00 0.00 2.90
1040 1098 2.311854 CCTGGGTGGGCAGGAAGAT 61.312 63.158 0.00 0.00 40.95 2.40
1041 1099 2.935481 CCTGGGTGGGCAGGAAGA 60.935 66.667 0.00 0.00 40.95 2.87
1067 1125 3.363970 GCACCGACATCTTGTTGTTGTAG 60.364 47.826 0.00 0.00 28.19 2.74
1094 1189 3.315142 GACCTCCGCCAGCATGTCA 62.315 63.158 0.00 0.00 0.00 3.58
1181 1276 2.914097 AGCAGCCCAACAAGTGCC 60.914 61.111 0.00 0.00 36.54 5.01
1184 1279 0.957395 CGATGAGCAGCCCAACAAGT 60.957 55.000 0.00 0.00 0.00 3.16
1187 1282 2.046023 CCGATGAGCAGCCCAACA 60.046 61.111 0.00 0.00 0.00 3.33
1190 1285 4.478371 CAGCCGATGAGCAGCCCA 62.478 66.667 0.00 0.00 34.23 5.36
1363 1470 5.067023 GGCAGGAGGATATCTTTGTTGAAAG 59.933 44.000 2.05 0.00 40.13 2.62
1374 1481 3.160269 CAATTTGGGGCAGGAGGATATC 58.840 50.000 0.00 0.00 0.00 1.63
1390 1497 2.040145 CCACAAGCCCCAAATCCAATTT 59.960 45.455 0.00 0.00 0.00 1.82
1661 1786 4.274950 ACAAAATTCTTGGGTCGTACAGTG 59.725 41.667 0.00 0.00 0.00 3.66
1669 1797 4.260172 CGCACAAAACAAAATTCTTGGGTC 60.260 41.667 5.68 0.00 0.00 4.46
1684 1812 2.360844 TGAAAGAGTCCACGCACAAAA 58.639 42.857 0.00 0.00 0.00 2.44
1685 1813 2.031258 TGAAAGAGTCCACGCACAAA 57.969 45.000 0.00 0.00 0.00 2.83
1686 1814 2.031258 TTGAAAGAGTCCACGCACAA 57.969 45.000 0.00 0.00 0.00 3.33
1687 1815 1.939934 CTTTGAAAGAGTCCACGCACA 59.060 47.619 0.00 0.00 0.00 4.57
1688 1816 1.940613 ACTTTGAAAGAGTCCACGCAC 59.059 47.619 12.53 0.00 0.00 5.34
1691 1819 5.007626 TGAATCAACTTTGAAAGAGTCCACG 59.992 40.000 12.53 0.00 41.13 4.94
1786 1939 4.023193 GTCCCACAAATCTACAACAACTGG 60.023 45.833 0.00 0.00 0.00 4.00
1806 1959 3.071479 TGAATTCCGTTGCAACTAGTCC 58.929 45.455 26.09 11.76 0.00 3.85
1827 1980 6.759272 TGTCTAAACACTGAATTACTGAGCT 58.241 36.000 0.00 0.00 0.00 4.09
1829 1982 9.639601 TGTATGTCTAAACACTGAATTACTGAG 57.360 33.333 0.00 0.00 38.48 3.35
1854 2007 8.001881 TCCTGAGCTCTAGAATAGTAACTTTG 57.998 38.462 16.19 0.00 40.38 2.77
1962 2138 1.831736 TCGTCCCAGAAGAAATCCCTC 59.168 52.381 0.00 0.00 0.00 4.30
2130 2308 7.335422 AGCAAAAGATACATAGTTTGTCAGGAG 59.665 37.037 0.00 0.00 39.87 3.69
2133 2311 9.760660 GTAAGCAAAAGATACATAGTTTGTCAG 57.239 33.333 0.00 0.00 39.87 3.51
2184 2362 0.674581 TGTCGCTGCAGAAGAATGGG 60.675 55.000 20.43 0.00 0.00 4.00
2376 2565 0.318955 GCAACAGTGCCCATGTCAAC 60.319 55.000 0.00 0.00 45.68 3.18
2491 2696 5.220931 GGAAAGATAACTATGCTTGGCACAG 60.221 44.000 0.00 0.00 43.04 3.66
2492 2697 4.640201 GGAAAGATAACTATGCTTGGCACA 59.360 41.667 0.00 0.00 43.04 4.57
2508 2713 8.762645 TGTGAGAAACTACAGATATGGAAAGAT 58.237 33.333 0.00 0.00 0.00 2.40
2570 2779 7.236474 GCCTAAATAAAGCAAAACTTCAATGC 58.764 34.615 0.00 0.00 37.75 3.56
2580 2831 6.412362 TCTGTTTGGCCTAAATAAAGCAAA 57.588 33.333 3.32 0.00 0.00 3.68
2594 2845 8.462016 AGTAAGACATTTAATGATCTGTTTGGC 58.538 33.333 12.28 0.00 0.00 4.52
2645 2896 1.301293 GCTCCTTGGAACAGAGGGG 59.699 63.158 0.00 0.00 42.39 4.79
2738 2989 1.474143 GCTAGTGATGAGGAACCTGCC 60.474 57.143 0.00 0.00 0.00 4.85
2842 3093 1.699083 TGATGAAACAGGAGCACCTCA 59.301 47.619 0.00 0.00 45.94 3.86
2899 3150 1.750399 CATACCCTGCTGCACACCC 60.750 63.158 0.00 0.00 0.00 4.61
2902 3153 1.002257 CCACATACCCTGCTGCACA 60.002 57.895 0.00 0.00 0.00 4.57
2923 3174 1.421410 GCTCGATCCGTTTGACGCAT 61.421 55.000 0.00 0.00 40.91 4.73
3118 3369 1.446016 AGACTTTGGGTAGGTTGCCT 58.554 50.000 0.00 0.00 37.71 4.75
3160 3411 2.669569 TCGAAGGTGCAAGCCAGC 60.670 61.111 0.00 0.00 42.22 4.85
3260 3511 1.143305 GCATCGCGATGATAAGCACT 58.857 50.000 44.20 9.64 41.20 4.40
3261 3512 0.164647 GGCATCGCGATGATAAGCAC 59.835 55.000 44.20 27.21 41.20 4.40
3262 3513 0.249826 TGGCATCGCGATGATAAGCA 60.250 50.000 44.20 20.46 41.20 3.91
3264 3515 1.201998 GCATGGCATCGCGATGATAAG 60.202 52.381 44.20 31.05 45.27 1.73
3266 3517 0.320596 TGCATGGCATCGCGATGATA 60.321 50.000 44.20 32.61 45.27 2.15
3267 3518 1.598685 TGCATGGCATCGCGATGAT 60.599 52.632 44.20 29.82 45.27 2.45
3268 3519 2.203042 TGCATGGCATCGCGATGA 60.203 55.556 44.20 29.03 45.27 2.92
3269 3520 2.051614 GTGCATGGCATCGCGATG 60.052 61.111 38.15 38.15 45.23 3.84
3270 3521 1.449726 AATGTGCATGGCATCGCGAT 61.450 50.000 17.62 17.62 41.91 4.58
3271 3522 2.050639 GAATGTGCATGGCATCGCGA 62.051 55.000 13.09 13.09 41.91 5.87
3276 3527 0.742505 CGGAAGAATGTGCATGGCAT 59.257 50.000 0.00 0.00 41.91 4.40
3277 3528 0.322366 TCGGAAGAATGTGCATGGCA 60.322 50.000 0.00 0.00 37.03 4.92
3278 3529 2.481212 TCGGAAGAATGTGCATGGC 58.519 52.632 0.00 0.00 37.03 4.40
3279 3530 3.837409 TGCATCGGAAGAATGTGCATGG 61.837 50.000 0.00 0.00 45.53 3.66
3280 3531 1.402613 TGCATCGGAAGAATGTGCATG 59.597 47.619 0.00 0.00 45.53 4.06
3281 3532 1.753930 TGCATCGGAAGAATGTGCAT 58.246 45.000 0.00 0.00 45.53 3.96
3290 3541 1.970917 GCTCGGTTGTGCATCGGAAG 61.971 60.000 0.00 0.00 34.77 3.46
3466 3720 7.932491 CAGTCTCATTATCATCATGGTTCTTCT 59.068 37.037 0.00 0.00 0.00 2.85
3467 3721 7.930325 TCAGTCTCATTATCATCATGGTTCTTC 59.070 37.037 0.00 0.00 0.00 2.87
3468 3722 7.799081 TCAGTCTCATTATCATCATGGTTCTT 58.201 34.615 0.00 0.00 0.00 2.52
3540 3800 9.683069 CCAAAATATGAGCCTTATTCATTGTAC 57.317 33.333 0.00 0.00 36.68 2.90
3627 3891 1.004595 CACACATGTCATCAGCGAGG 58.995 55.000 0.00 0.00 0.00 4.63
3649 3913 7.574568 ACCATAGGTAAATCAGCACATGTGTG 61.575 42.308 26.01 21.00 40.85 3.82
3652 3916 5.116084 ACCATAGGTAAATCAGCACATGT 57.884 39.130 0.00 0.00 32.11 3.21
3768 4036 5.600696 ACATTTTGACCAAAAAGGCTAGTG 58.399 37.500 11.34 6.60 42.04 2.74
3780 4048 3.639094 ACATTTTCCCGACATTTTGACCA 59.361 39.130 0.00 0.00 0.00 4.02
3795 4063 7.103641 TCACCTCACCTAAGTATGACATTTTC 58.896 38.462 0.00 0.00 0.00 2.29
3854 4525 5.316167 TCTTAGATTCCAAAAGCAGCAGAA 58.684 37.500 0.00 0.00 0.00 3.02
3892 4582 2.969628 ATTTGGTGGCACGAAAACAA 57.030 40.000 27.42 15.47 29.94 2.83
3918 4608 2.876091 TCGCTTTGGTCGTATGAGAAG 58.124 47.619 0.00 0.00 0.00 2.85
3947 4637 6.554419 TGATGCGTTAAATTCAAAGATCCAG 58.446 36.000 0.00 0.00 0.00 3.86
3949 4639 7.321271 CGTATGATGCGTTAAATTCAAAGATCC 59.679 37.037 0.00 0.00 0.00 3.36
4031 4722 5.394224 GGTGCTGAATGCTAACAGTAGAGTA 60.394 44.000 0.00 0.00 43.37 2.59
4078 4769 6.664515 AGTCGTTTAACATGTGTTATGTTGG 58.335 36.000 13.79 3.31 41.73 3.77
4109 4800 6.299805 TGTCATAGACCATTTTAGTCTGCT 57.700 37.500 3.74 0.00 44.25 4.24
4123 4814 5.220416 GCGGTCAAAGTTGTATGTCATAGAC 60.220 44.000 0.00 0.00 0.00 2.59
4127 4818 3.674997 AGCGGTCAAAGTTGTATGTCAT 58.325 40.909 0.00 0.00 0.00 3.06
4128 4819 3.120321 AGCGGTCAAAGTTGTATGTCA 57.880 42.857 0.00 0.00 0.00 3.58
4177 4871 7.039923 TGTTTTGCGGGTATGTAATTTTTCCTA 60.040 33.333 0.00 0.00 0.00 2.94
4193 4887 1.184970 ATGGGGAGTTGTTTTGCGGG 61.185 55.000 0.00 0.00 0.00 6.13
4207 4901 6.074648 TCTTATAAATAGGTTTGCCATGGGG 58.925 40.000 15.13 0.00 37.19 4.96
4243 4949 4.015872 AGATTAGAAGTGTTTCCCGCAA 57.984 40.909 0.00 0.00 33.64 4.85
4313 5019 8.306761 GGTGATGTTTCTGGAGAATGTTTATTT 58.693 33.333 0.00 0.00 33.54 1.40
4314 5020 7.362056 CGGTGATGTTTCTGGAGAATGTTTATT 60.362 37.037 0.00 0.00 33.54 1.40
4315 5021 6.094048 CGGTGATGTTTCTGGAGAATGTTTAT 59.906 38.462 0.00 0.00 33.54 1.40
4329 5035 0.605319 TCTGGTGGCGGTGATGTTTC 60.605 55.000 0.00 0.00 0.00 2.78
4340 5046 3.544684 TGTGTCATATTGATCTGGTGGC 58.455 45.455 0.00 0.00 0.00 5.01
4374 5080 5.675684 ACCATTCTCTCTCTCTTTCCTTC 57.324 43.478 0.00 0.00 0.00 3.46
4394 5100 0.320697 AGGAGAACACGGCAAGTACC 59.679 55.000 0.00 0.00 0.00 3.34
4432 5138 4.298009 CCAGCAGGCTGTTGAGAG 57.702 61.111 29.78 11.74 42.15 3.20
4442 5148 1.305549 AAAAGGATGGGCCAGCAGG 60.306 57.895 25.00 0.00 40.02 4.85
4443 5149 1.325476 GGAAAAGGATGGGCCAGCAG 61.325 60.000 25.00 0.00 40.02 4.24
4515 5225 4.265073 AGATGGTAAGAATCAAGGTGTGC 58.735 43.478 0.00 0.00 0.00 4.57
4522 5232 7.348274 AGTGAGGGATAAGATGGTAAGAATCAA 59.652 37.037 0.00 0.00 0.00 2.57



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.