Multiple sequence alignment - TraesCS2D01G009000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G009000 chr2D 100.000 3569 0 0 1 3569 5078369 5081937 0.000000e+00 6591.0
1 TraesCS2D01G009000 chr2D 98.450 516 8 0 1 516 29507213 29506698 0.000000e+00 909.0
2 TraesCS2D01G009000 chr2D 86.250 80 4 5 516 589 18253671 18253749 2.950000e-11 80.5
3 TraesCS2D01G009000 chr2D 88.525 61 5 2 528 587 45501184 45501243 4.940000e-09 73.1
4 TraesCS2D01G009000 chr2D 89.474 57 5 1 527 582 133782881 133782825 1.780000e-08 71.3
5 TraesCS2D01G009000 chr2B 94.118 1683 80 4 875 2557 6342063 6340400 0.000000e+00 2542.0
6 TraesCS2D01G009000 chr6D 98.656 521 7 0 1 521 470276119 470275599 0.000000e+00 924.0
7 TraesCS2D01G009000 chr6D 98.259 517 8 1 1 516 22277466 22276950 0.000000e+00 904.0
8 TraesCS2D01G009000 chr6D 77.763 760 131 27 1737 2474 148079541 148078798 1.970000e-117 433.0
9 TraesCS2D01G009000 chr5D 98.646 517 7 0 1 517 438144840 438144324 0.000000e+00 917.0
10 TraesCS2D01G009000 chr5D 98.450 516 7 1 1 516 559205442 559204928 0.000000e+00 907.0
11 TraesCS2D01G009000 chr5D 98.256 516 9 0 1 516 324066913 324067428 0.000000e+00 904.0
12 TraesCS2D01G009000 chr5D 98.259 517 8 1 1 516 491691415 491691931 0.000000e+00 904.0
13 TraesCS2D01G009000 chr5D 86.301 73 5 4 521 589 35987296 35987225 1.370000e-09 75.0
14 TraesCS2D01G009000 chr5D 88.525 61 4 1 2944 3001 378905397 378905337 1.780000e-08 71.3
15 TraesCS2D01G009000 chrUn 98.453 517 7 1 1 516 108262060 108261544 0.000000e+00 909.0
16 TraesCS2D01G009000 chrUn 89.286 56 5 1 528 582 104131428 104131483 6.390000e-08 69.4
17 TraesCS2D01G009000 chr4D 98.259 517 8 1 1 516 14674580 14675096 0.000000e+00 904.0
18 TraesCS2D01G009000 chr4D 88.136 59 6 1 2944 3001 487352019 487351961 6.390000e-08 69.4
19 TraesCS2D01G009000 chr4D 85.938 64 6 2 2941 3001 374318686 374318749 8.270000e-07 65.8
20 TraesCS2D01G009000 chr4B 77.641 729 144 14 1127 1847 3831210 3830493 3.290000e-115 425.0
21 TraesCS2D01G009000 chr6A 77.530 761 131 28 1737 2474 199458821 199459564 4.260000e-114 422.0
22 TraesCS2D01G009000 chr6B 77.195 763 130 30 1737 2474 260781346 260780603 4.290000e-109 405.0
23 TraesCS2D01G009000 chr6B 75.610 164 33 6 2156 2317 276302941 276302783 1.370000e-09 75.0
24 TraesCS2D01G009000 chr1D 88.235 340 23 4 3235 3561 21474745 21474410 1.200000e-104 390.0
25 TraesCS2D01G009000 chr1D 95.312 64 3 0 526 589 2063770 2063707 6.300000e-18 102.0
26 TraesCS2D01G009000 chr1D 86.364 66 7 1 2952 3015 202969647 202969582 1.780000e-08 71.3
27 TraesCS2D01G009000 chr3A 83.498 406 42 13 3160 3564 25392858 25393239 4.380000e-94 355.0
28 TraesCS2D01G009000 chr3A 81.315 289 31 11 3276 3564 25390542 25390807 2.790000e-51 213.0
29 TraesCS2D01G009000 chr4A 88.350 103 8 4 2939 3037 591000988 591001090 1.740000e-23 121.0
30 TraesCS2D01G009000 chr1A 92.105 76 5 1 516 590 42108439 42108514 4.870000e-19 106.0
31 TraesCS2D01G009000 chr5B 91.667 60 3 2 2940 2997 528740595 528740536 8.210000e-12 82.4
32 TraesCS2D01G009000 chr3D 89.062 64 4 2 2941 3001 365117636 365117699 3.820000e-10 76.8
33 TraesCS2D01G009000 chr7B 87.500 64 5 1 2941 3001 388857507 388857570 1.780000e-08 71.3
34 TraesCS2D01G009000 chr7B 84.722 72 8 2 521 589 614545972 614545901 6.390000e-08 69.4
35 TraesCS2D01G009000 chr2A 81.928 83 15 0 2941 3023 23425076 23425158 1.780000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G009000 chr2D 5078369 5081937 3568 False 6591 6591 100.0000 1 3569 1 chr2D.!!$F1 3568
1 TraesCS2D01G009000 chr2D 29506698 29507213 515 True 909 909 98.4500 1 516 1 chr2D.!!$R1 515
2 TraesCS2D01G009000 chr2B 6340400 6342063 1663 True 2542 2542 94.1180 875 2557 1 chr2B.!!$R1 1682
3 TraesCS2D01G009000 chr6D 470275599 470276119 520 True 924 924 98.6560 1 521 1 chr6D.!!$R3 520
4 TraesCS2D01G009000 chr6D 22276950 22277466 516 True 904 904 98.2590 1 516 1 chr6D.!!$R1 515
5 TraesCS2D01G009000 chr6D 148078798 148079541 743 True 433 433 77.7630 1737 2474 1 chr6D.!!$R2 737
6 TraesCS2D01G009000 chr5D 438144324 438144840 516 True 917 917 98.6460 1 517 1 chr5D.!!$R3 516
7 TraesCS2D01G009000 chr5D 559204928 559205442 514 True 907 907 98.4500 1 516 1 chr5D.!!$R4 515
8 TraesCS2D01G009000 chr5D 324066913 324067428 515 False 904 904 98.2560 1 516 1 chr5D.!!$F1 515
9 TraesCS2D01G009000 chr5D 491691415 491691931 516 False 904 904 98.2590 1 516 1 chr5D.!!$F2 515
10 TraesCS2D01G009000 chrUn 108261544 108262060 516 True 909 909 98.4530 1 516 1 chrUn.!!$R1 515
11 TraesCS2D01G009000 chr4D 14674580 14675096 516 False 904 904 98.2590 1 516 1 chr4D.!!$F1 515
12 TraesCS2D01G009000 chr4B 3830493 3831210 717 True 425 425 77.6410 1127 1847 1 chr4B.!!$R1 720
13 TraesCS2D01G009000 chr6A 199458821 199459564 743 False 422 422 77.5300 1737 2474 1 chr6A.!!$F1 737
14 TraesCS2D01G009000 chr6B 260780603 260781346 743 True 405 405 77.1950 1737 2474 1 chr6B.!!$R1 737
15 TraesCS2D01G009000 chr3A 25390542 25393239 2697 False 284 355 82.4065 3160 3564 2 chr3A.!!$F1 404

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
706 708 0.034616 GGAGGCTAGCGCAGATTGAT 59.965 55.0 11.47 0.0 38.1 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2623 2643 0.039074 GACCGCGTATAGCTCAGCAT 60.039 55.0 4.92 0.0 45.59 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
451 453 1.496060 ATGCTCACATTAGTCCCGGA 58.504 50.000 0.73 0.00 30.07 5.14
518 520 2.878526 GCCCTGTTTTGTACTAGTGGGG 60.879 54.545 5.39 5.36 34.29 4.96
536 538 3.961414 GGGAACGGGGTGGCTGAA 61.961 66.667 0.00 0.00 0.00 3.02
537 539 2.359975 GGAACGGGGTGGCTGAAG 60.360 66.667 0.00 0.00 0.00 3.02
539 541 2.852075 AACGGGGTGGCTGAAGGA 60.852 61.111 0.00 0.00 0.00 3.36
540 542 2.804828 GAACGGGGTGGCTGAAGGAG 62.805 65.000 0.00 0.00 0.00 3.69
541 543 3.003173 CGGGGTGGCTGAAGGAGA 61.003 66.667 0.00 0.00 0.00 3.71
542 544 2.592993 CGGGGTGGCTGAAGGAGAA 61.593 63.158 0.00 0.00 0.00 2.87
543 545 1.002011 GGGGTGGCTGAAGGAGAAC 60.002 63.158 0.00 0.00 0.00 3.01
544 546 1.376037 GGGTGGCTGAAGGAGAACG 60.376 63.158 0.00 0.00 0.00 3.95
545 547 2.035442 GGTGGCTGAAGGAGAACGC 61.035 63.158 0.00 0.00 0.00 4.84
547 549 0.246635 GTGGCTGAAGGAGAACGCTA 59.753 55.000 0.00 0.00 0.00 4.26
549 551 0.179097 GGCTGAAGGAGAACGCTAGG 60.179 60.000 0.00 0.00 0.00 3.02
550 552 0.179097 GCTGAAGGAGAACGCTAGGG 60.179 60.000 5.05 5.05 0.00 3.53
551 553 1.187087 CTGAAGGAGAACGCTAGGGT 58.813 55.000 6.62 6.62 0.00 4.34
553 555 1.549170 TGAAGGAGAACGCTAGGGTTC 59.451 52.381 33.90 33.90 45.19 3.62
558 560 1.518792 GAACGCTAGGGTTCGCCTC 60.519 63.158 29.82 13.50 37.20 4.70
559 561 3.352338 AACGCTAGGGTTCGCCTCG 62.352 63.158 18.71 0.00 37.45 4.63
562 564 4.570663 CTAGGGTTCGCCTCGCCG 62.571 72.222 0.00 0.00 37.45 6.46
580 582 4.180946 CTCGCGGGAGTGGACGAG 62.181 72.222 20.59 5.90 45.02 4.18
585 587 2.330372 CGGGAGTGGACGAGACGAA 61.330 63.158 0.00 0.00 0.00 3.85
586 588 1.507174 GGGAGTGGACGAGACGAAG 59.493 63.158 0.00 0.00 0.00 3.79
587 589 1.507174 GGAGTGGACGAGACGAAGG 59.493 63.158 0.00 0.00 0.00 3.46
588 590 1.507174 GAGTGGACGAGACGAAGGG 59.493 63.158 0.00 0.00 0.00 3.95
589 591 0.959372 GAGTGGACGAGACGAAGGGA 60.959 60.000 0.00 0.00 0.00 4.20
590 592 0.961358 AGTGGACGAGACGAAGGGAG 60.961 60.000 0.00 0.00 0.00 4.30
592 594 2.490685 GACGAGACGAAGGGAGGC 59.509 66.667 0.00 0.00 0.00 4.70
593 595 3.398353 GACGAGACGAAGGGAGGCG 62.398 68.421 0.00 0.00 0.00 5.52
594 596 3.441290 CGAGACGAAGGGAGGCGT 61.441 66.667 0.00 0.00 44.33 5.68
595 597 2.182030 GAGACGAAGGGAGGCGTG 59.818 66.667 0.00 0.00 41.34 5.34
596 598 2.600769 AGACGAAGGGAGGCGTGT 60.601 61.111 0.00 0.00 41.34 4.49
597 599 2.156051 GAGACGAAGGGAGGCGTGTT 62.156 60.000 0.00 0.00 41.34 3.32
599 601 2.809601 CGAAGGGAGGCGTGTTCG 60.810 66.667 0.00 0.00 36.22 3.95
603 605 0.464916 AAGGGAGGCGTGTTCGTTTT 60.465 50.000 0.00 0.00 39.49 2.43
630 632 7.861630 TCCTAAGAAGAAAATTTGAAGTGTCG 58.138 34.615 0.00 0.00 0.00 4.35
631 633 7.713507 TCCTAAGAAGAAAATTTGAAGTGTCGA 59.286 33.333 0.00 0.00 0.00 4.20
632 634 8.012241 CCTAAGAAGAAAATTTGAAGTGTCGAG 58.988 37.037 0.00 0.00 0.00 4.04
633 635 6.305693 AGAAGAAAATTTGAAGTGTCGAGG 57.694 37.500 0.00 0.00 0.00 4.63
634 636 6.055588 AGAAGAAAATTTGAAGTGTCGAGGA 58.944 36.000 0.00 0.00 0.00 3.71
635 637 5.674933 AGAAAATTTGAAGTGTCGAGGAC 57.325 39.130 0.00 0.00 0.00 3.85
638 640 7.162082 AGAAAATTTGAAGTGTCGAGGACTAT 58.838 34.615 0.00 0.00 33.15 2.12
639 641 7.661847 AGAAAATTTGAAGTGTCGAGGACTATT 59.338 33.333 0.00 0.00 33.15 1.73
641 643 7.745620 AATTTGAAGTGTCGAGGACTATTTT 57.254 32.000 0.00 0.00 33.15 1.82
642 644 6.539649 TTTGAAGTGTCGAGGACTATTTTG 57.460 37.500 0.00 0.00 33.15 2.44
645 647 4.602340 AGTGTCGAGGACTATTTTGTGT 57.398 40.909 0.00 0.00 33.15 3.72
646 648 4.307432 AGTGTCGAGGACTATTTTGTGTG 58.693 43.478 0.00 0.00 33.15 3.82
647 649 4.056050 GTGTCGAGGACTATTTTGTGTGT 58.944 43.478 0.00 0.00 33.15 3.72
648 650 4.055360 TGTCGAGGACTATTTTGTGTGTG 58.945 43.478 0.00 0.00 33.15 3.82
649 651 3.064207 TCGAGGACTATTTTGTGTGTGC 58.936 45.455 0.00 0.00 0.00 4.57
652 654 4.083324 CGAGGACTATTTTGTGTGTGCATT 60.083 41.667 0.00 0.00 0.00 3.56
653 655 5.125100 AGGACTATTTTGTGTGTGCATTG 57.875 39.130 0.00 0.00 0.00 2.82
654 656 4.584325 AGGACTATTTTGTGTGTGCATTGT 59.416 37.500 0.00 0.00 0.00 2.71
655 657 4.681025 GGACTATTTTGTGTGTGCATTGTG 59.319 41.667 0.00 0.00 0.00 3.33
656 658 4.050553 ACTATTTTGTGTGTGCATTGTGC 58.949 39.130 0.00 0.00 45.29 4.57
657 659 1.649664 TTTTGTGTGTGCATTGTGCC 58.350 45.000 0.00 0.00 44.23 5.01
658 660 0.533951 TTTGTGTGTGCATTGTGCCA 59.466 45.000 0.00 0.00 44.23 4.92
659 661 0.533951 TTGTGTGTGCATTGTGCCAA 59.466 45.000 0.00 0.00 44.23 4.52
660 662 0.102663 TGTGTGTGCATTGTGCCAAG 59.897 50.000 0.00 0.00 44.23 3.61
661 663 0.598158 GTGTGTGCATTGTGCCAAGG 60.598 55.000 0.00 0.00 44.23 3.61
663 665 0.958091 GTGTGCATTGTGCCAAGGTA 59.042 50.000 0.00 0.00 44.23 3.08
665 667 0.109132 GTGCATTGTGCCAAGGTAGC 60.109 55.000 0.00 0.00 44.23 3.58
666 668 0.539207 TGCATTGTGCCAAGGTAGCA 60.539 50.000 0.00 0.00 44.23 3.49
667 669 0.819582 GCATTGTGCCAAGGTAGCAT 59.180 50.000 0.00 0.00 43.29 3.79
669 671 2.372264 CATTGTGCCAAGGTAGCATCT 58.628 47.619 0.00 0.00 43.29 2.90
670 672 2.584835 TTGTGCCAAGGTAGCATCTT 57.415 45.000 0.00 0.00 43.29 2.40
672 674 3.266510 TGTGCCAAGGTAGCATCTTAG 57.733 47.619 0.00 0.00 43.29 2.18
673 675 2.092968 TGTGCCAAGGTAGCATCTTAGG 60.093 50.000 0.00 0.00 43.29 2.69
674 676 2.170607 GTGCCAAGGTAGCATCTTAGGA 59.829 50.000 0.00 0.00 43.29 2.94
675 677 3.048600 TGCCAAGGTAGCATCTTAGGAT 58.951 45.455 0.00 0.00 34.69 3.24
676 678 3.071602 TGCCAAGGTAGCATCTTAGGATC 59.928 47.826 0.00 0.00 34.69 3.36
677 679 3.862642 GCCAAGGTAGCATCTTAGGATCG 60.863 52.174 0.00 0.00 0.00 3.69
678 680 3.574396 CCAAGGTAGCATCTTAGGATCGA 59.426 47.826 0.00 0.00 0.00 3.59
679 681 4.221703 CCAAGGTAGCATCTTAGGATCGAT 59.778 45.833 0.00 0.00 0.00 3.59
680 682 5.419155 CCAAGGTAGCATCTTAGGATCGATA 59.581 44.000 0.00 0.00 0.00 2.92
681 683 6.097554 CCAAGGTAGCATCTTAGGATCGATAT 59.902 42.308 0.00 0.00 0.00 1.63
683 685 8.687242 CAAGGTAGCATCTTAGGATCGATATTA 58.313 37.037 0.00 0.00 0.00 0.98
684 686 9.427821 AAGGTAGCATCTTAGGATCGATATTAT 57.572 33.333 0.00 0.00 0.00 1.28
685 687 8.855110 AGGTAGCATCTTAGGATCGATATTATG 58.145 37.037 0.00 0.00 0.00 1.90
686 688 8.634444 GGTAGCATCTTAGGATCGATATTATGT 58.366 37.037 0.00 0.00 0.00 2.29
688 690 7.495901 AGCATCTTAGGATCGATATTATGTGG 58.504 38.462 0.00 0.00 0.00 4.17
689 691 7.343057 AGCATCTTAGGATCGATATTATGTGGA 59.657 37.037 0.00 0.00 0.00 4.02
690 692 7.651304 GCATCTTAGGATCGATATTATGTGGAG 59.349 40.741 0.00 0.00 0.00 3.86
691 693 7.646548 TCTTAGGATCGATATTATGTGGAGG 57.353 40.000 0.00 0.00 0.00 4.30
692 694 4.744795 AGGATCGATATTATGTGGAGGC 57.255 45.455 0.00 0.00 0.00 4.70
694 696 5.519808 AGGATCGATATTATGTGGAGGCTA 58.480 41.667 0.00 0.00 0.00 3.93
696 698 4.720649 TCGATATTATGTGGAGGCTAGC 57.279 45.455 6.04 6.04 0.00 3.42
697 699 3.128764 TCGATATTATGTGGAGGCTAGCG 59.871 47.826 9.00 0.00 0.00 4.26
700 702 0.104855 TTATGTGGAGGCTAGCGCAG 59.895 55.000 11.47 6.31 38.10 5.18
701 703 0.755327 TATGTGGAGGCTAGCGCAGA 60.755 55.000 11.47 0.00 38.10 4.26
706 708 0.034616 GGAGGCTAGCGCAGATTGAT 59.965 55.000 11.47 0.00 38.10 2.57
708 710 2.605030 GAGGCTAGCGCAGATTGATAG 58.395 52.381 11.47 1.08 38.10 2.08
709 711 1.274728 AGGCTAGCGCAGATTGATAGG 59.725 52.381 11.47 0.00 38.10 2.57
710 712 1.001406 GGCTAGCGCAGATTGATAGGT 59.999 52.381 11.47 0.00 38.10 3.08
711 713 2.333014 GCTAGCGCAGATTGATAGGTC 58.667 52.381 11.47 0.00 35.78 3.85
712 714 2.029470 GCTAGCGCAGATTGATAGGTCT 60.029 50.000 11.47 0.00 35.78 3.85
713 715 2.522836 AGCGCAGATTGATAGGTCTG 57.477 50.000 11.47 0.00 43.62 3.51
723 725 6.090493 CAGATTGATAGGTCTGCATAATGTCG 59.910 42.308 0.00 0.00 35.87 4.35
724 726 4.257267 TGATAGGTCTGCATAATGTCGG 57.743 45.455 0.00 0.00 0.00 4.79
725 727 3.641436 TGATAGGTCTGCATAATGTCGGT 59.359 43.478 0.00 0.00 0.00 4.69
726 728 2.604046 AGGTCTGCATAATGTCGGTC 57.396 50.000 0.00 0.00 0.00 4.79
727 729 1.139058 AGGTCTGCATAATGTCGGTCC 59.861 52.381 0.00 0.00 0.00 4.46
728 730 1.583054 GTCTGCATAATGTCGGTCCC 58.417 55.000 0.00 0.00 0.00 4.46
729 731 1.134521 GTCTGCATAATGTCGGTCCCA 60.135 52.381 0.00 0.00 0.00 4.37
730 732 1.138859 TCTGCATAATGTCGGTCCCAG 59.861 52.381 0.00 0.00 0.00 4.45
731 733 0.908910 TGCATAATGTCGGTCCCAGT 59.091 50.000 0.00 0.00 0.00 4.00
732 734 1.299541 GCATAATGTCGGTCCCAGTG 58.700 55.000 0.00 0.00 0.00 3.66
733 735 1.299541 CATAATGTCGGTCCCAGTGC 58.700 55.000 0.00 0.00 0.00 4.40
734 736 1.134401 CATAATGTCGGTCCCAGTGCT 60.134 52.381 0.00 0.00 0.00 4.40
735 737 1.855295 TAATGTCGGTCCCAGTGCTA 58.145 50.000 0.00 0.00 0.00 3.49
736 738 0.537188 AATGTCGGTCCCAGTGCTAG 59.463 55.000 0.00 0.00 0.00 3.42
737 739 1.961180 ATGTCGGTCCCAGTGCTAGC 61.961 60.000 8.10 8.10 0.00 3.42
738 740 2.037367 TCGGTCCCAGTGCTAGCT 59.963 61.111 17.23 0.00 0.00 3.32
740 742 0.106167 TCGGTCCCAGTGCTAGCTAT 60.106 55.000 17.23 0.82 0.00 2.97
741 743 0.753262 CGGTCCCAGTGCTAGCTATT 59.247 55.000 17.23 0.00 0.00 1.73
742 744 1.539065 CGGTCCCAGTGCTAGCTATTG 60.539 57.143 17.23 11.01 0.00 1.90
743 745 1.486726 GGTCCCAGTGCTAGCTATTGT 59.513 52.381 17.23 0.00 0.00 2.71
744 746 2.092914 GGTCCCAGTGCTAGCTATTGTT 60.093 50.000 17.23 0.00 0.00 2.83
745 747 3.198872 GTCCCAGTGCTAGCTATTGTTC 58.801 50.000 17.23 0.00 0.00 3.18
746 748 3.107601 TCCCAGTGCTAGCTATTGTTCT 58.892 45.455 17.23 0.52 0.00 3.01
748 750 3.873952 CCCAGTGCTAGCTATTGTTCTTC 59.126 47.826 17.23 0.00 0.00 2.87
749 751 4.507710 CCAGTGCTAGCTATTGTTCTTCA 58.492 43.478 17.23 0.00 0.00 3.02
752 754 5.063186 CAGTGCTAGCTATTGTTCTTCACAG 59.937 44.000 17.23 0.00 36.48 3.66
754 756 5.814705 GTGCTAGCTATTGTTCTTCACAGAT 59.185 40.000 17.23 0.00 36.48 2.90
756 758 6.045318 GCTAGCTATTGTTCTTCACAGATCA 58.955 40.000 7.70 0.00 36.48 2.92
758 760 6.981762 AGCTATTGTTCTTCACAGATCAAG 57.018 37.500 0.00 0.00 40.51 3.02
759 761 6.471146 AGCTATTGTTCTTCACAGATCAAGT 58.529 36.000 0.00 0.00 40.51 3.16
760 762 6.939163 AGCTATTGTTCTTCACAGATCAAGTT 59.061 34.615 0.00 0.00 40.51 2.66
761 763 8.097038 AGCTATTGTTCTTCACAGATCAAGTTA 58.903 33.333 0.00 0.00 40.51 2.24
772 774 8.365399 TCACAGATCAAGTTATAATTTAGCGG 57.635 34.615 0.00 0.00 0.00 5.52
773 775 8.201464 TCACAGATCAAGTTATAATTTAGCGGA 58.799 33.333 0.00 0.00 0.00 5.54
774 776 8.993121 CACAGATCAAGTTATAATTTAGCGGAT 58.007 33.333 0.00 0.00 0.00 4.18
776 778 9.817365 CAGATCAAGTTATAATTTAGCGGATTG 57.183 33.333 0.00 0.00 0.00 2.67
777 779 8.507249 AGATCAAGTTATAATTTAGCGGATTGC 58.493 33.333 0.00 0.00 46.98 3.56
827 829 9.561069 AACATTTGAGGTATAGTATTGGATGAC 57.439 33.333 0.00 0.00 0.00 3.06
829 831 5.977489 TGAGGTATAGTATTGGATGACGG 57.023 43.478 0.00 0.00 0.00 4.79
830 832 4.770531 TGAGGTATAGTATTGGATGACGGG 59.229 45.833 0.00 0.00 0.00 5.28
833 835 3.963428 ATAGTATTGGATGACGGGCTC 57.037 47.619 0.00 0.00 0.00 4.70
834 836 0.759346 AGTATTGGATGACGGGCTCC 59.241 55.000 0.00 0.00 0.00 4.70
835 837 0.250338 GTATTGGATGACGGGCTCCC 60.250 60.000 0.00 0.00 0.00 4.30
836 838 0.692756 TATTGGATGACGGGCTCCCA 60.693 55.000 5.70 0.00 35.37 4.37
838 840 3.399181 GGATGACGGGCTCCCACA 61.399 66.667 5.70 5.15 35.37 4.17
840 842 1.227674 GATGACGGGCTCCCACATC 60.228 63.158 18.92 18.92 39.90 3.06
841 843 1.971505 GATGACGGGCTCCCACATCA 61.972 60.000 24.18 16.50 42.91 3.07
842 844 1.976132 ATGACGGGCTCCCACATCAG 61.976 60.000 5.70 0.00 35.37 2.90
844 846 2.124983 CGGGCTCCCACATCAGTG 60.125 66.667 5.70 0.00 45.47 3.66
846 848 1.380302 GGGCTCCCACATCAGTGTT 59.620 57.895 0.00 0.00 44.39 3.32
847 849 0.251341 GGGCTCCCACATCAGTGTTT 60.251 55.000 0.00 0.00 44.39 2.83
848 850 0.883833 GGCTCCCACATCAGTGTTTG 59.116 55.000 0.00 0.00 44.39 2.93
854 856 2.668617 CACATCAGTGTTTGTGGACG 57.331 50.000 16.37 0.00 40.92 4.79
856 858 0.874390 CATCAGTGTTTGTGGACGGG 59.126 55.000 0.00 0.00 0.00 5.28
858 860 0.462937 TCAGTGTTTGTGGACGGGTG 60.463 55.000 0.00 0.00 0.00 4.61
860 862 2.517402 TGTTTGTGGACGGGTGCC 60.517 61.111 0.00 0.00 0.00 5.01
861 863 3.292159 GTTTGTGGACGGGTGCCC 61.292 66.667 0.00 0.00 0.00 5.36
933 935 2.756207 GCCCTTAGTCGTCTCTCTTTCT 59.244 50.000 0.00 0.00 0.00 2.52
943 945 8.582433 AGTCGTCTCTCTTTCTCTTTTAAAAG 57.418 34.615 19.91 19.91 37.36 2.27
944 946 8.198778 AGTCGTCTCTCTTTCTCTTTTAAAAGT 58.801 33.333 23.75 0.00 37.31 2.66
959 961 3.764237 AAAAGTAAGTCGCCTCTCCAA 57.236 42.857 0.00 0.00 0.00 3.53
992 994 1.407936 TCCATCTCCTCTACAGCAGC 58.592 55.000 0.00 0.00 0.00 5.25
1006 1008 2.858868 CAGCGTTGCTCAGCTCAC 59.141 61.111 0.00 0.00 42.52 3.51
1007 1009 2.358003 AGCGTTGCTCAGCTCACC 60.358 61.111 0.00 0.00 39.98 4.02
1010 1012 1.301244 CGTTGCTCAGCTCACCTGT 60.301 57.895 0.00 0.00 42.38 4.00
1012 1014 0.952984 GTTGCTCAGCTCACCTGTCC 60.953 60.000 0.00 0.00 42.38 4.02
1013 1015 1.123861 TTGCTCAGCTCACCTGTCCT 61.124 55.000 0.00 0.00 42.38 3.85
1014 1016 0.251787 TGCTCAGCTCACCTGTCCTA 60.252 55.000 0.00 0.00 42.38 2.94
1024 1026 4.342378 GCTCACCTGTCCTATTATCACTCA 59.658 45.833 0.00 0.00 0.00 3.41
1050 1052 2.240500 CGCATCCGTTAGAGCTGCC 61.241 63.158 0.00 0.00 0.00 4.85
1055 1057 2.103042 CCGTTAGAGCTGCCTGCAC 61.103 63.158 0.00 0.00 45.94 4.57
1056 1058 2.447887 CGTTAGAGCTGCCTGCACG 61.448 63.158 0.00 3.61 45.94 5.34
1121 1123 2.517598 CGTTGCTACGTCAGTGCTT 58.482 52.632 12.66 0.00 42.72 3.91
1134 1136 0.464036 AGTGCTTCCGACACACTTCA 59.536 50.000 0.00 0.00 41.78 3.02
1274 1276 4.819761 GGCATCGCCGACTCTGCA 62.820 66.667 12.60 0.00 39.62 4.41
1422 1424 2.764547 GCCCCTTCGAGGCCTACT 60.765 66.667 4.42 0.00 45.16 2.57
1424 1426 1.047034 GCCCCTTCGAGGCCTACTTA 61.047 60.000 4.42 0.00 45.16 2.24
1646 1648 1.043116 TGGAGATGACCAGGGCTACG 61.043 60.000 0.00 0.00 34.77 3.51
1667 1669 1.021920 GCTCCTCCGCCTTCTTGAAC 61.022 60.000 0.00 0.00 0.00 3.18
1670 1672 0.250295 CCTCCGCCTTCTTGAACACA 60.250 55.000 0.00 0.00 0.00 3.72
1886 1891 3.656045 GACAAACCCACCGCCGTG 61.656 66.667 0.00 0.00 39.91 4.94
2086 2091 2.124942 GGTGCTAGAGTGGCTGCC 60.125 66.667 12.87 12.87 0.00 4.85
2480 2500 1.140312 TGGCCATAGGAGGTTCATCC 58.860 55.000 0.00 0.00 39.89 3.51
2493 2513 3.655777 AGGTTCATCCTACCAAAACCTGA 59.344 43.478 4.39 0.00 46.02 3.86
2501 2521 1.669760 CCAAAACCTGACGCGGCTA 60.670 57.895 15.80 0.00 0.00 3.93
2519 2539 2.726760 GCTAATACAGAGATTCACGCCG 59.273 50.000 0.00 0.00 0.00 6.46
2521 2541 2.783828 ATACAGAGATTCACGCCGAG 57.216 50.000 0.00 0.00 0.00 4.63
2546 2566 1.892474 GGCAATGGCAAGGAACAGTAA 59.108 47.619 0.58 0.00 43.71 2.24
2557 2577 7.923878 TGGCAAGGAACAGTAAAAAGATTAAAC 59.076 33.333 0.00 0.00 0.00 2.01
2558 2578 7.384115 GGCAAGGAACAGTAAAAAGATTAAACC 59.616 37.037 0.00 0.00 0.00 3.27
2559 2579 8.141909 GCAAGGAACAGTAAAAAGATTAAACCT 58.858 33.333 0.00 0.00 0.00 3.50
2562 2582 8.638873 AGGAACAGTAAAAAGATTAAACCTTGG 58.361 33.333 0.00 0.00 0.00 3.61
2563 2583 8.635328 GGAACAGTAAAAAGATTAAACCTTGGA 58.365 33.333 0.00 0.00 0.00 3.53
2574 2594 9.942850 AAGATTAAACCTTGGAATAAAATGGTG 57.057 29.630 0.00 0.00 0.00 4.17
2575 2595 9.320295 AGATTAAACCTTGGAATAAAATGGTGA 57.680 29.630 0.00 0.00 0.00 4.02
2576 2596 9.586435 GATTAAACCTTGGAATAAAATGGTGAG 57.414 33.333 0.00 0.00 0.00 3.51
2577 2597 8.713708 TTAAACCTTGGAATAAAATGGTGAGA 57.286 30.769 0.00 0.00 0.00 3.27
2578 2598 6.840780 AACCTTGGAATAAAATGGTGAGAG 57.159 37.500 0.00 0.00 0.00 3.20
2579 2599 6.139679 ACCTTGGAATAAAATGGTGAGAGA 57.860 37.500 0.00 0.00 0.00 3.10
2580 2600 6.735556 ACCTTGGAATAAAATGGTGAGAGAT 58.264 36.000 0.00 0.00 0.00 2.75
2581 2601 7.872138 ACCTTGGAATAAAATGGTGAGAGATA 58.128 34.615 0.00 0.00 0.00 1.98
2582 2602 7.995488 ACCTTGGAATAAAATGGTGAGAGATAG 59.005 37.037 0.00 0.00 0.00 2.08
2583 2603 8.213679 CCTTGGAATAAAATGGTGAGAGATAGA 58.786 37.037 0.00 0.00 0.00 1.98
2584 2604 9.618890 CTTGGAATAAAATGGTGAGAGATAGAA 57.381 33.333 0.00 0.00 0.00 2.10
2585 2605 9.973661 TTGGAATAAAATGGTGAGAGATAGAAA 57.026 29.630 0.00 0.00 0.00 2.52
2586 2606 9.973661 TGGAATAAAATGGTGAGAGATAGAAAA 57.026 29.630 0.00 0.00 0.00 2.29
2595 2615 9.736414 ATGGTGAGAGATAGAAAATTATGGATG 57.264 33.333 0.00 0.00 0.00 3.51
2596 2616 7.663081 TGGTGAGAGATAGAAAATTATGGATGC 59.337 37.037 0.00 0.00 0.00 3.91
2597 2617 7.148507 GGTGAGAGATAGAAAATTATGGATGCG 60.149 40.741 0.00 0.00 0.00 4.73
2598 2618 7.386299 GTGAGAGATAGAAAATTATGGATGCGT 59.614 37.037 0.00 0.00 0.00 5.24
2599 2619 8.585018 TGAGAGATAGAAAATTATGGATGCGTA 58.415 33.333 0.00 0.00 0.00 4.42
2600 2620 9.424319 GAGAGATAGAAAATTATGGATGCGTAA 57.576 33.333 0.99 0.99 0.00 3.18
2601 2621 9.778741 AGAGATAGAAAATTATGGATGCGTAAA 57.221 29.630 2.77 0.00 0.00 2.01
2616 2636 8.286800 TGGATGCGTAAATAACTAAATACATGC 58.713 33.333 0.00 0.00 0.00 4.06
2617 2637 8.504005 GGATGCGTAAATAACTAAATACATGCT 58.496 33.333 0.00 0.00 0.00 3.79
2618 2638 9.530129 GATGCGTAAATAACTAAATACATGCTC 57.470 33.333 0.00 0.00 0.00 4.26
2619 2639 8.657074 TGCGTAAATAACTAAATACATGCTCT 57.343 30.769 0.00 0.00 0.00 4.09
2620 2640 8.761497 TGCGTAAATAACTAAATACATGCTCTC 58.239 33.333 0.00 0.00 0.00 3.20
2621 2641 8.761497 GCGTAAATAACTAAATACATGCTCTCA 58.239 33.333 0.00 0.00 0.00 3.27
2632 2652 4.937193 GCTCTCACATGCTGAGCT 57.063 55.556 20.75 0.00 45.64 4.09
2634 2654 2.529780 GCTCTCACATGCTGAGCTAT 57.470 50.000 20.75 0.00 45.64 2.97
2635 2655 3.657015 GCTCTCACATGCTGAGCTATA 57.343 47.619 20.75 6.26 45.64 1.31
2636 2656 3.316283 GCTCTCACATGCTGAGCTATAC 58.684 50.000 20.75 7.18 45.64 1.47
2637 2657 3.563508 CTCTCACATGCTGAGCTATACG 58.436 50.000 5.83 0.00 45.64 3.06
2638 2658 2.057316 CTCACATGCTGAGCTATACGC 58.943 52.381 5.83 0.00 40.23 4.42
2639 2659 0.780596 CACATGCTGAGCTATACGCG 59.219 55.000 3.53 3.53 45.59 6.01
2640 2660 0.319040 ACATGCTGAGCTATACGCGG 60.319 55.000 12.47 0.00 45.59 6.46
2641 2661 0.319040 CATGCTGAGCTATACGCGGT 60.319 55.000 12.47 0.22 45.59 5.68
2642 2662 0.039074 ATGCTGAGCTATACGCGGTC 60.039 55.000 12.47 0.00 45.59 4.79
2643 2663 1.359117 GCTGAGCTATACGCGGTCA 59.641 57.895 12.47 0.01 45.59 4.02
2644 2664 3.463574 CTGAGCTATACGCGGTCAG 57.536 57.895 12.47 7.23 46.44 3.51
2645 2665 0.661780 CTGAGCTATACGCGGTCAGC 60.662 60.000 12.47 15.38 46.06 4.26
2646 2666 3.269010 CTGAGCTATACGCGGTCAGCA 62.269 57.143 23.78 8.70 46.06 4.41
2647 2667 4.526530 CTGAGCTATACGCGGTCAGCAT 62.527 54.545 23.78 12.72 46.06 3.79
2648 2668 5.939353 CTGAGCTATACGCGGTCAGCATT 62.939 52.174 23.78 9.40 46.06 3.56
2649 2669 6.616975 CTGAGCTATACGCGGTCAGCATTA 62.617 50.000 23.78 12.17 46.06 1.90
2657 2677 1.871080 CGGTCAGCATTACCCTCATC 58.129 55.000 0.00 0.00 33.10 2.92
2658 2678 1.138859 CGGTCAGCATTACCCTCATCA 59.861 52.381 0.00 0.00 33.10 3.07
2659 2679 2.224378 CGGTCAGCATTACCCTCATCAT 60.224 50.000 0.00 0.00 33.10 2.45
2660 2680 3.745480 CGGTCAGCATTACCCTCATCATT 60.745 47.826 0.00 0.00 33.10 2.57
2661 2681 3.567164 GGTCAGCATTACCCTCATCATTG 59.433 47.826 0.00 0.00 0.00 2.82
2662 2682 3.004106 GTCAGCATTACCCTCATCATTGC 59.996 47.826 0.00 0.00 0.00 3.56
2663 2683 2.953648 CAGCATTACCCTCATCATTGCA 59.046 45.455 0.00 0.00 0.00 4.08
2664 2684 3.382227 CAGCATTACCCTCATCATTGCAA 59.618 43.478 0.00 0.00 0.00 4.08
2665 2685 4.038763 CAGCATTACCCTCATCATTGCAAT 59.961 41.667 5.99 5.99 0.00 3.56
2666 2686 5.242171 CAGCATTACCCTCATCATTGCAATA 59.758 40.000 12.53 1.34 0.00 1.90
2667 2687 6.014647 AGCATTACCCTCATCATTGCAATAT 58.985 36.000 12.53 3.76 0.00 1.28
2668 2688 6.071560 AGCATTACCCTCATCATTGCAATATG 60.072 38.462 12.53 15.11 0.00 1.78
2669 2689 6.627243 CATTACCCTCATCATTGCAATATGG 58.373 40.000 12.53 5.70 0.00 2.74
2670 2690 3.503365 ACCCTCATCATTGCAATATGGG 58.497 45.455 22.07 22.07 38.13 4.00
2671 2691 3.117016 ACCCTCATCATTGCAATATGGGT 60.117 43.478 22.95 22.95 40.25 4.51
2672 2692 4.106179 ACCCTCATCATTGCAATATGGGTA 59.894 41.667 25.27 10.73 42.87 3.69
2673 2693 4.703575 CCCTCATCATTGCAATATGGGTAG 59.296 45.833 12.53 9.39 0.00 3.18
2674 2694 5.319453 CCTCATCATTGCAATATGGGTAGT 58.681 41.667 12.53 0.00 0.00 2.73
2675 2695 6.475504 CCTCATCATTGCAATATGGGTAGTA 58.524 40.000 12.53 0.09 0.00 1.82
2676 2696 7.114754 CCTCATCATTGCAATATGGGTAGTAT 58.885 38.462 12.53 0.00 0.00 2.12
2677 2697 7.613022 CCTCATCATTGCAATATGGGTAGTATT 59.387 37.037 12.53 0.00 0.00 1.89
2678 2698 8.339344 TCATCATTGCAATATGGGTAGTATTG 57.661 34.615 12.53 0.00 40.70 1.90
2679 2699 7.394077 TCATCATTGCAATATGGGTAGTATTGG 59.606 37.037 12.53 0.00 39.05 3.16
2680 2700 6.846988 TCATTGCAATATGGGTAGTATTGGA 58.153 36.000 12.53 0.00 39.05 3.53
2681 2701 6.942005 TCATTGCAATATGGGTAGTATTGGAG 59.058 38.462 12.53 0.00 39.77 3.86
2682 2702 6.508030 TTGCAATATGGGTAGTATTGGAGA 57.492 37.500 0.00 0.00 39.77 3.71
2683 2703 6.508030 TGCAATATGGGTAGTATTGGAGAA 57.492 37.500 7.68 0.00 39.05 2.87
2684 2704 7.090319 TGCAATATGGGTAGTATTGGAGAAT 57.910 36.000 7.68 0.00 39.05 2.40
2685 2705 7.168219 TGCAATATGGGTAGTATTGGAGAATC 58.832 38.462 7.68 0.00 39.05 2.52
2686 2706 7.017551 TGCAATATGGGTAGTATTGGAGAATCT 59.982 37.037 7.68 0.00 39.05 2.40
2687 2707 7.550906 GCAATATGGGTAGTATTGGAGAATCTC 59.449 40.741 0.71 0.71 39.05 2.75
2688 2708 8.820831 CAATATGGGTAGTATTGGAGAATCTCT 58.179 37.037 10.38 0.00 36.41 3.10
2689 2709 8.980832 ATATGGGTAGTATTGGAGAATCTCTT 57.019 34.615 10.38 0.00 33.73 2.85
2690 2710 6.485830 TGGGTAGTATTGGAGAATCTCTTG 57.514 41.667 10.38 0.00 33.73 3.02
2691 2711 5.163301 TGGGTAGTATTGGAGAATCTCTTGC 60.163 44.000 10.38 0.07 33.73 4.01
2692 2712 5.163301 GGGTAGTATTGGAGAATCTCTTGCA 60.163 44.000 10.38 0.00 33.73 4.08
2693 2713 6.349300 GGTAGTATTGGAGAATCTCTTGCAA 58.651 40.000 10.38 6.56 33.73 4.08
2694 2714 6.258947 GGTAGTATTGGAGAATCTCTTGCAAC 59.741 42.308 10.38 3.27 33.73 4.17
2695 2715 5.809001 AGTATTGGAGAATCTCTTGCAACA 58.191 37.500 10.38 0.00 33.73 3.33
2696 2716 6.240894 AGTATTGGAGAATCTCTTGCAACAA 58.759 36.000 10.38 5.17 33.73 2.83
2697 2717 5.640189 ATTGGAGAATCTCTTGCAACAAG 57.360 39.130 10.38 0.81 33.73 3.16
2698 2718 3.415212 TGGAGAATCTCTTGCAACAAGG 58.585 45.455 10.38 0.00 33.73 3.61
2699 2719 3.181440 TGGAGAATCTCTTGCAACAAGGT 60.181 43.478 10.38 0.00 33.73 3.50
2700 2720 3.823304 GGAGAATCTCTTGCAACAAGGTT 59.177 43.478 10.38 0.00 33.73 3.50
2701 2721 4.279420 GGAGAATCTCTTGCAACAAGGTTT 59.721 41.667 10.38 0.00 33.73 3.27
2702 2722 5.473504 GGAGAATCTCTTGCAACAAGGTTTA 59.526 40.000 10.38 0.00 33.73 2.01
2703 2723 6.151817 GGAGAATCTCTTGCAACAAGGTTTAT 59.848 38.462 10.38 0.00 33.73 1.40
2704 2724 6.917533 AGAATCTCTTGCAACAAGGTTTATG 58.082 36.000 7.44 0.00 0.00 1.90
2705 2725 6.491403 AGAATCTCTTGCAACAAGGTTTATGT 59.509 34.615 7.44 0.00 0.00 2.29
2706 2726 6.655078 ATCTCTTGCAACAAGGTTTATGTT 57.345 33.333 7.44 0.00 41.50 2.71
2707 2727 7.759489 ATCTCTTGCAACAAGGTTTATGTTA 57.241 32.000 7.44 0.00 38.90 2.41
2708 2728 6.966021 TCTCTTGCAACAAGGTTTATGTTAC 58.034 36.000 7.44 0.00 38.90 2.50
2709 2729 6.544197 TCTCTTGCAACAAGGTTTATGTTACA 59.456 34.615 7.44 0.00 38.90 2.41
2710 2730 7.230510 TCTCTTGCAACAAGGTTTATGTTACAT 59.769 33.333 2.58 2.58 38.90 2.29
2711 2731 8.397575 TCTTGCAACAAGGTTTATGTTACATA 57.602 30.769 0.29 0.29 38.90 2.29
2712 2732 8.851145 TCTTGCAACAAGGTTTATGTTACATAA 58.149 29.630 13.14 13.14 38.90 1.90
2713 2733 9.469807 CTTGCAACAAGGTTTATGTTACATAAA 57.530 29.630 22.10 22.10 38.90 1.40
2714 2734 8.804688 TGCAACAAGGTTTATGTTACATAAAC 57.195 30.769 34.79 34.79 38.90 2.01
2715 2735 8.634444 TGCAACAAGGTTTATGTTACATAAACT 58.366 29.630 37.59 27.86 41.63 2.66
2716 2736 9.471084 GCAACAAGGTTTATGTTACATAAACTT 57.529 29.630 37.59 33.17 41.63 2.66
2728 2748 9.762933 ATGTTACATAAACTTTTTGTTGCAGAT 57.237 25.926 0.00 0.00 39.13 2.90
2760 2780 9.840427 CTTTTAACTATTTCTACAACATGGTGG 57.160 33.333 16.70 0.00 0.00 4.61
2761 2781 8.927675 TTTAACTATTTCTACAACATGGTGGT 57.072 30.769 16.70 3.34 0.00 4.16
2762 2782 8.927675 TTAACTATTTCTACAACATGGTGGTT 57.072 30.769 16.70 9.12 0.00 3.67
2768 2788 1.007502 CAACATGGTGGTTGTGGCG 60.008 57.895 1.63 0.00 42.43 5.69
2769 2789 2.199652 AACATGGTGGTTGTGGCGG 61.200 57.895 0.00 0.00 0.00 6.13
2770 2790 2.282110 CATGGTGGTTGTGGCGGA 60.282 61.111 0.00 0.00 0.00 5.54
2771 2791 1.900981 CATGGTGGTTGTGGCGGAA 60.901 57.895 0.00 0.00 0.00 4.30
2772 2792 1.152652 ATGGTGGTTGTGGCGGAAA 60.153 52.632 0.00 0.00 0.00 3.13
2773 2793 0.757188 ATGGTGGTTGTGGCGGAAAA 60.757 50.000 0.00 0.00 0.00 2.29
2774 2794 0.970937 TGGTGGTTGTGGCGGAAAAA 60.971 50.000 0.00 0.00 0.00 1.94
2798 2818 9.991388 AAAAATTTTGAAACACAGATGATGTTG 57.009 25.926 3.73 0.00 41.41 3.33
2799 2819 6.774354 ATTTTGAAACACAGATGATGTTGC 57.226 33.333 0.00 0.00 41.41 4.17
2800 2820 3.541071 TGAAACACAGATGATGTTGCG 57.459 42.857 0.00 0.00 41.41 4.85
2801 2821 2.226200 TGAAACACAGATGATGTTGCGG 59.774 45.455 0.00 0.00 41.41 5.69
2802 2822 2.183478 AACACAGATGATGTTGCGGA 57.817 45.000 0.00 0.00 41.41 5.54
2803 2823 2.183478 ACACAGATGATGTTGCGGAA 57.817 45.000 0.00 0.00 41.41 4.30
2804 2824 2.503331 ACACAGATGATGTTGCGGAAA 58.497 42.857 0.00 0.00 41.41 3.13
2805 2825 2.884012 ACACAGATGATGTTGCGGAAAA 59.116 40.909 0.00 0.00 41.41 2.29
2806 2826 3.507233 ACACAGATGATGTTGCGGAAAAT 59.493 39.130 0.00 0.00 41.41 1.82
2807 2827 4.699735 ACACAGATGATGTTGCGGAAAATA 59.300 37.500 0.00 0.00 41.41 1.40
2808 2828 5.357878 ACACAGATGATGTTGCGGAAAATAT 59.642 36.000 0.00 0.00 41.41 1.28
2809 2829 6.127647 ACACAGATGATGTTGCGGAAAATATT 60.128 34.615 0.00 0.00 41.41 1.28
2810 2830 6.753279 CACAGATGATGTTGCGGAAAATATTT 59.247 34.615 0.00 0.00 41.41 1.40
2811 2831 6.753279 ACAGATGATGTTGCGGAAAATATTTG 59.247 34.615 0.39 0.00 39.96 2.32
2812 2832 5.750067 AGATGATGTTGCGGAAAATATTTGC 59.250 36.000 0.39 0.00 0.00 3.68
2813 2833 4.814147 TGATGTTGCGGAAAATATTTGCA 58.186 34.783 8.47 7.89 0.00 4.08
2814 2834 4.863689 TGATGTTGCGGAAAATATTTGCAG 59.136 37.500 8.47 5.27 33.55 4.41
2815 2835 4.250116 TGTTGCGGAAAATATTTGCAGT 57.750 36.364 8.47 0.00 33.55 4.40
2816 2836 4.626042 TGTTGCGGAAAATATTTGCAGTT 58.374 34.783 8.47 0.00 33.55 3.16
2817 2837 5.053145 TGTTGCGGAAAATATTTGCAGTTT 58.947 33.333 8.47 0.00 33.55 2.66
2818 2838 5.525378 TGTTGCGGAAAATATTTGCAGTTTT 59.475 32.000 8.47 0.00 33.55 2.43
2819 2839 6.037610 TGTTGCGGAAAATATTTGCAGTTTTT 59.962 30.769 8.47 0.00 33.55 1.94
2855 2875 4.690184 TTTTGTATCATGAGTGCTGCTG 57.310 40.909 0.09 0.00 0.00 4.41
2856 2876 1.660167 TGTATCATGAGTGCTGCTGC 58.340 50.000 8.89 8.89 40.20 5.25
2857 2877 0.942962 GTATCATGAGTGCTGCTGCC 59.057 55.000 13.47 4.62 38.71 4.85
2858 2878 0.179037 TATCATGAGTGCTGCTGCCC 60.179 55.000 13.47 0.75 38.71 5.36
2859 2879 2.206182 ATCATGAGTGCTGCTGCCCA 62.206 55.000 13.47 8.75 38.71 5.36
2860 2880 1.974875 CATGAGTGCTGCTGCCCAA 60.975 57.895 13.47 0.00 38.71 4.12
2861 2881 1.677966 ATGAGTGCTGCTGCCCAAG 60.678 57.895 13.47 0.00 38.71 3.61
2862 2882 3.060615 GAGTGCTGCTGCCCAAGG 61.061 66.667 13.47 0.00 38.71 3.61
2882 2902 2.215907 CAATTTTGCAACACACGGGA 57.784 45.000 0.00 0.00 0.00 5.14
2883 2903 2.753296 CAATTTTGCAACACACGGGAT 58.247 42.857 0.00 0.00 0.00 3.85
2884 2904 2.437200 ATTTTGCAACACACGGGATG 57.563 45.000 0.00 0.00 0.00 3.51
2885 2905 1.107114 TTTTGCAACACACGGGATGT 58.893 45.000 0.00 0.00 44.81 3.06
2886 2906 1.107114 TTTGCAACACACGGGATGTT 58.893 45.000 0.00 0.00 40.64 2.71
2889 2909 4.569279 AACACACGGGATGTTGCA 57.431 50.000 0.00 0.00 40.64 4.08
2890 2910 2.330254 AACACACGGGATGTTGCAG 58.670 52.632 0.00 0.00 40.64 4.41
2891 2911 0.179032 AACACACGGGATGTTGCAGA 60.179 50.000 0.00 0.00 40.64 4.26
2892 2912 0.179032 ACACACGGGATGTTGCAGAA 60.179 50.000 0.00 0.00 40.64 3.02
2893 2913 1.167851 CACACGGGATGTTGCAGAAT 58.832 50.000 0.00 0.00 40.64 2.40
2894 2914 1.541147 CACACGGGATGTTGCAGAATT 59.459 47.619 0.00 0.00 40.64 2.17
2895 2915 2.030007 CACACGGGATGTTGCAGAATTT 60.030 45.455 0.00 0.00 40.64 1.82
2896 2916 2.627699 ACACGGGATGTTGCAGAATTTT 59.372 40.909 0.00 0.00 38.98 1.82
2897 2917 3.069443 ACACGGGATGTTGCAGAATTTTT 59.931 39.130 0.00 0.00 38.98 1.94
2921 2941 3.719924 TGCAAAAAGAGACATGCAAAGG 58.280 40.909 0.00 0.00 45.04 3.11
2922 2942 3.384146 TGCAAAAAGAGACATGCAAAGGA 59.616 39.130 0.00 0.00 45.04 3.36
2923 2943 3.737774 GCAAAAAGAGACATGCAAAGGAC 59.262 43.478 0.00 0.00 38.63 3.85
2924 2944 4.737352 GCAAAAAGAGACATGCAAAGGACA 60.737 41.667 0.00 0.00 38.63 4.02
2925 2945 5.535333 CAAAAAGAGACATGCAAAGGACAT 58.465 37.500 0.00 0.00 0.00 3.06
2926 2946 5.796424 AAAAGAGACATGCAAAGGACATT 57.204 34.783 0.00 0.00 0.00 2.71
2927 2947 5.796424 AAAGAGACATGCAAAGGACATTT 57.204 34.783 0.00 0.00 0.00 2.32
2928 2948 6.899393 AAAGAGACATGCAAAGGACATTTA 57.101 33.333 0.00 0.00 0.00 1.40
2929 2949 5.886960 AGAGACATGCAAAGGACATTTAC 57.113 39.130 0.00 0.00 0.00 2.01
2930 2950 5.564550 AGAGACATGCAAAGGACATTTACT 58.435 37.500 0.00 0.00 0.00 2.24
2931 2951 6.711277 AGAGACATGCAAAGGACATTTACTA 58.289 36.000 0.00 0.00 0.00 1.82
2932 2952 6.820656 AGAGACATGCAAAGGACATTTACTAG 59.179 38.462 0.00 0.00 0.00 2.57
2933 2953 6.476378 AGACATGCAAAGGACATTTACTAGT 58.524 36.000 0.00 0.00 0.00 2.57
2934 2954 7.620880 AGACATGCAAAGGACATTTACTAGTA 58.379 34.615 0.00 0.00 0.00 1.82
2935 2955 7.766278 AGACATGCAAAGGACATTTACTAGTAG 59.234 37.037 2.23 0.00 0.00 2.57
2936 2956 7.620880 ACATGCAAAGGACATTTACTAGTAGA 58.379 34.615 3.59 0.00 0.00 2.59
2937 2957 8.100791 ACATGCAAAGGACATTTACTAGTAGAA 58.899 33.333 3.59 1.88 0.00 2.10
2938 2958 8.946085 CATGCAAAGGACATTTACTAGTAGAAA 58.054 33.333 3.59 0.00 0.00 2.52
2939 2959 8.911918 TGCAAAGGACATTTACTAGTAGAAAA 57.088 30.769 3.59 0.00 0.00 2.29
2940 2960 9.344772 TGCAAAGGACATTTACTAGTAGAAAAA 57.655 29.630 3.59 4.71 0.00 1.94
2971 2991 5.767670 TCCTAATGGAGCAGTTAGTAGTCT 58.232 41.667 0.00 0.00 37.46 3.24
2972 2992 5.828859 TCCTAATGGAGCAGTTAGTAGTCTC 59.171 44.000 0.00 0.00 37.46 3.36
2973 2993 5.830991 CCTAATGGAGCAGTTAGTAGTCTCT 59.169 44.000 0.00 0.00 34.57 3.10
2974 2994 6.999272 CCTAATGGAGCAGTTAGTAGTCTCTA 59.001 42.308 0.00 0.00 34.57 2.43
2975 2995 7.668052 CCTAATGGAGCAGTTAGTAGTCTCTAT 59.332 40.741 0.00 0.00 34.57 1.98
2976 2996 7.906199 AATGGAGCAGTTAGTAGTCTCTATT 57.094 36.000 0.00 0.00 32.55 1.73
2977 2997 6.945938 TGGAGCAGTTAGTAGTCTCTATTC 57.054 41.667 0.00 0.00 0.00 1.75
2978 2998 5.828859 TGGAGCAGTTAGTAGTCTCTATTCC 59.171 44.000 0.00 0.00 0.00 3.01
2979 2999 5.049267 GGAGCAGTTAGTAGTCTCTATTCCG 60.049 48.000 0.00 0.00 0.00 4.30
2980 3000 4.822896 AGCAGTTAGTAGTCTCTATTCCGG 59.177 45.833 0.00 0.00 0.00 5.14
2981 3001 4.023021 GCAGTTAGTAGTCTCTATTCCGGG 60.023 50.000 0.00 0.00 0.00 5.73
2982 3002 5.131784 CAGTTAGTAGTCTCTATTCCGGGT 58.868 45.833 0.00 0.00 0.00 5.28
2983 3003 5.593502 CAGTTAGTAGTCTCTATTCCGGGTT 59.406 44.000 0.00 0.00 0.00 4.11
2984 3004 6.096564 CAGTTAGTAGTCTCTATTCCGGGTTT 59.903 42.308 0.00 0.00 0.00 3.27
2985 3005 6.666980 AGTTAGTAGTCTCTATTCCGGGTTTT 59.333 38.462 0.00 0.00 0.00 2.43
2986 3006 7.179872 AGTTAGTAGTCTCTATTCCGGGTTTTT 59.820 37.037 0.00 0.00 0.00 1.94
3001 3021 3.524346 TTTTTGTCCCACCTCCCAC 57.476 52.632 0.00 0.00 0.00 4.61
3002 3022 0.105913 TTTTTGTCCCACCTCCCACC 60.106 55.000 0.00 0.00 0.00 4.61
3003 3023 0.996762 TTTTGTCCCACCTCCCACCT 60.997 55.000 0.00 0.00 0.00 4.00
3004 3024 0.996762 TTTGTCCCACCTCCCACCTT 60.997 55.000 0.00 0.00 0.00 3.50
3005 3025 1.423794 TTGTCCCACCTCCCACCTTC 61.424 60.000 0.00 0.00 0.00 3.46
3006 3026 2.606519 TCCCACCTCCCACCTTCG 60.607 66.667 0.00 0.00 0.00 3.79
3007 3027 2.928396 CCCACCTCCCACCTTCGT 60.928 66.667 0.00 0.00 0.00 3.85
3008 3028 2.663196 CCACCTCCCACCTTCGTC 59.337 66.667 0.00 0.00 0.00 4.20
3009 3029 1.913762 CCACCTCCCACCTTCGTCT 60.914 63.158 0.00 0.00 0.00 4.18
3010 3030 0.613853 CCACCTCCCACCTTCGTCTA 60.614 60.000 0.00 0.00 0.00 2.59
3011 3031 0.818296 CACCTCCCACCTTCGTCTAG 59.182 60.000 0.00 0.00 0.00 2.43
3012 3032 0.408700 ACCTCCCACCTTCGTCTAGT 59.591 55.000 0.00 0.00 0.00 2.57
3013 3033 1.203149 ACCTCCCACCTTCGTCTAGTT 60.203 52.381 0.00 0.00 0.00 2.24
3014 3034 1.900486 CCTCCCACCTTCGTCTAGTTT 59.100 52.381 0.00 0.00 0.00 2.66
3015 3035 2.094130 CCTCCCACCTTCGTCTAGTTTC 60.094 54.545 0.00 0.00 0.00 2.78
3016 3036 2.826725 CTCCCACCTTCGTCTAGTTTCT 59.173 50.000 0.00 0.00 0.00 2.52
3017 3037 3.236896 TCCCACCTTCGTCTAGTTTCTT 58.763 45.455 0.00 0.00 0.00 2.52
3018 3038 3.644738 TCCCACCTTCGTCTAGTTTCTTT 59.355 43.478 0.00 0.00 0.00 2.52
3019 3039 4.102054 TCCCACCTTCGTCTAGTTTCTTTT 59.898 41.667 0.00 0.00 0.00 2.27
3020 3040 4.451435 CCCACCTTCGTCTAGTTTCTTTTC 59.549 45.833 0.00 0.00 0.00 2.29
3021 3041 4.150098 CCACCTTCGTCTAGTTTCTTTTCG 59.850 45.833 0.00 0.00 0.00 3.46
3022 3042 4.743644 CACCTTCGTCTAGTTTCTTTTCGT 59.256 41.667 0.00 0.00 0.00 3.85
3023 3043 4.981054 ACCTTCGTCTAGTTTCTTTTCGTC 59.019 41.667 0.00 0.00 0.00 4.20
3024 3044 4.385146 CCTTCGTCTAGTTTCTTTTCGTCC 59.615 45.833 0.00 0.00 0.00 4.79
3025 3045 4.843220 TCGTCTAGTTTCTTTTCGTCCT 57.157 40.909 0.00 0.00 0.00 3.85
3026 3046 4.791974 TCGTCTAGTTTCTTTTCGTCCTC 58.208 43.478 0.00 0.00 0.00 3.71
3027 3047 3.919197 CGTCTAGTTTCTTTTCGTCCTCC 59.081 47.826 0.00 0.00 0.00 4.30
3028 3048 4.321082 CGTCTAGTTTCTTTTCGTCCTCCT 60.321 45.833 0.00 0.00 0.00 3.69
3029 3049 5.162794 GTCTAGTTTCTTTTCGTCCTCCTC 58.837 45.833 0.00 0.00 0.00 3.71
3030 3050 3.404224 AGTTTCTTTTCGTCCTCCTCC 57.596 47.619 0.00 0.00 0.00 4.30
3031 3051 2.038689 AGTTTCTTTTCGTCCTCCTCCC 59.961 50.000 0.00 0.00 0.00 4.30
3032 3052 1.724545 TTCTTTTCGTCCTCCTCCCA 58.275 50.000 0.00 0.00 0.00 4.37
3033 3053 0.974383 TCTTTTCGTCCTCCTCCCAC 59.026 55.000 0.00 0.00 0.00 4.61
3034 3054 0.036294 CTTTTCGTCCTCCTCCCACC 60.036 60.000 0.00 0.00 0.00 4.61
3035 3055 0.473117 TTTTCGTCCTCCTCCCACCT 60.473 55.000 0.00 0.00 0.00 4.00
3036 3056 0.903454 TTTCGTCCTCCTCCCACCTC 60.903 60.000 0.00 0.00 0.00 3.85
3037 3057 2.760385 CGTCCTCCTCCCACCTCC 60.760 72.222 0.00 0.00 0.00 4.30
3038 3058 2.365768 GTCCTCCTCCCACCTCCC 60.366 72.222 0.00 0.00 0.00 4.30
3039 3059 2.874245 TCCTCCTCCCACCTCCCA 60.874 66.667 0.00 0.00 0.00 4.37
3040 3060 2.366167 CCTCCTCCCACCTCCCAG 60.366 72.222 0.00 0.00 0.00 4.45
3041 3061 2.366167 CTCCTCCCACCTCCCAGG 60.366 72.222 0.00 0.00 42.49 4.45
3051 3071 2.134092 CCTCCCAGGTAACGATCCC 58.866 63.158 0.00 0.00 46.39 3.85
3052 3072 1.740285 CTCCCAGGTAACGATCCCG 59.260 63.158 0.00 0.00 46.39 5.14
3062 3082 4.172346 CGATCCCGTTGCACGTAA 57.828 55.556 7.68 0.00 40.58 3.18
3063 3083 1.705727 CGATCCCGTTGCACGTAAC 59.294 57.895 7.68 0.00 40.58 2.50
3094 3114 3.398318 AAAAAGGGACCAAGACCACTT 57.602 42.857 0.00 0.00 36.73 3.16
3095 3115 4.529716 AAAAAGGGACCAAGACCACTTA 57.470 40.909 0.00 0.00 34.70 2.24
3096 3116 3.790089 AAAGGGACCAAGACCACTTAG 57.210 47.619 0.00 0.00 34.70 2.18
3097 3117 0.984995 AGGGACCAAGACCACTTAGC 59.015 55.000 0.00 0.00 34.70 3.09
3098 3118 0.391263 GGGACCAAGACCACTTAGCG 60.391 60.000 0.00 0.00 34.70 4.26
3099 3119 0.606604 GGACCAAGACCACTTAGCGA 59.393 55.000 0.00 0.00 34.70 4.93
3100 3120 1.404315 GGACCAAGACCACTTAGCGAG 60.404 57.143 0.00 0.00 34.70 5.03
3101 3121 0.608640 ACCAAGACCACTTAGCGAGG 59.391 55.000 0.00 0.00 34.70 4.63
3102 3122 0.741221 CCAAGACCACTTAGCGAGGC 60.741 60.000 0.00 0.00 34.70 4.70
3103 3123 0.741221 CAAGACCACTTAGCGAGGCC 60.741 60.000 0.00 0.00 34.70 5.19
3104 3124 1.900545 AAGACCACTTAGCGAGGCCC 61.901 60.000 0.00 0.00 34.28 5.80
3105 3125 3.387225 GACCACTTAGCGAGGCCCC 62.387 68.421 0.00 0.00 0.00 5.80
3106 3126 3.083997 CCACTTAGCGAGGCCCCT 61.084 66.667 0.00 0.00 0.00 4.79
3107 3127 2.501610 CACTTAGCGAGGCCCCTC 59.498 66.667 0.00 4.19 39.55 4.30
3115 3135 2.660802 GAGGCCCCTCGAACGAAA 59.339 61.111 0.00 0.00 33.06 3.46
3116 3136 1.004200 GAGGCCCCTCGAACGAAAA 60.004 57.895 0.00 0.00 33.06 2.29
3117 3137 0.604511 GAGGCCCCTCGAACGAAAAA 60.605 55.000 0.00 0.00 33.06 1.94
3136 3156 5.358298 AAAAAGTGGACGAAGAATGTAGC 57.642 39.130 0.00 0.00 0.00 3.58
3137 3157 2.674796 AGTGGACGAAGAATGTAGCC 57.325 50.000 0.00 0.00 0.00 3.93
3138 3158 1.899814 AGTGGACGAAGAATGTAGCCA 59.100 47.619 0.00 0.00 0.00 4.75
3139 3159 2.000447 GTGGACGAAGAATGTAGCCAC 59.000 52.381 0.00 0.00 37.72 5.01
3140 3160 1.066430 TGGACGAAGAATGTAGCCACC 60.066 52.381 0.00 0.00 0.00 4.61
3141 3161 1.066430 GGACGAAGAATGTAGCCACCA 60.066 52.381 0.00 0.00 0.00 4.17
3142 3162 2.420129 GGACGAAGAATGTAGCCACCAT 60.420 50.000 0.00 0.00 0.00 3.55
3143 3163 2.609459 GACGAAGAATGTAGCCACCATG 59.391 50.000 0.00 0.00 0.00 3.66
3144 3164 1.331756 CGAAGAATGTAGCCACCATGC 59.668 52.381 0.00 0.00 0.00 4.06
3145 3165 1.678101 GAAGAATGTAGCCACCATGCC 59.322 52.381 0.00 0.00 0.00 4.40
3146 3166 0.106519 AGAATGTAGCCACCATGCCC 60.107 55.000 0.00 0.00 0.00 5.36
3147 3167 0.106519 GAATGTAGCCACCATGCCCT 60.107 55.000 0.00 0.00 0.00 5.19
3148 3168 0.106519 AATGTAGCCACCATGCCCTC 60.107 55.000 0.00 0.00 0.00 4.30
3149 3169 0.990282 ATGTAGCCACCATGCCCTCT 60.990 55.000 0.00 0.00 0.00 3.69
3150 3170 1.147153 GTAGCCACCATGCCCTCTC 59.853 63.158 0.00 0.00 0.00 3.20
3151 3171 2.434843 TAGCCACCATGCCCTCTCG 61.435 63.158 0.00 0.00 0.00 4.04
3152 3172 2.871795 TAGCCACCATGCCCTCTCGA 62.872 60.000 0.00 0.00 0.00 4.04
3153 3173 2.989639 CCACCATGCCCTCTCGAA 59.010 61.111 0.00 0.00 0.00 3.71
3154 3174 1.450312 CCACCATGCCCTCTCGAAC 60.450 63.158 0.00 0.00 0.00 3.95
3155 3175 1.811266 CACCATGCCCTCTCGAACG 60.811 63.158 0.00 0.00 0.00 3.95
3156 3176 1.982395 ACCATGCCCTCTCGAACGA 60.982 57.895 0.00 0.00 0.00 3.85
3157 3177 1.218047 CCATGCCCTCTCGAACGAA 59.782 57.895 0.00 0.00 0.00 3.85
3158 3178 1.084370 CCATGCCCTCTCGAACGAAC 61.084 60.000 0.00 0.00 0.00 3.95
3159 3179 0.389817 CATGCCCTCTCGAACGAACA 60.390 55.000 0.00 0.00 0.00 3.18
3160 3180 0.320374 ATGCCCTCTCGAACGAACAA 59.680 50.000 0.00 0.00 0.00 2.83
3161 3181 0.105224 TGCCCTCTCGAACGAACAAA 59.895 50.000 0.00 0.00 0.00 2.83
3162 3182 1.223187 GCCCTCTCGAACGAACAAAA 58.777 50.000 0.00 0.00 0.00 2.44
3163 3183 1.070108 GCCCTCTCGAACGAACAAAAC 60.070 52.381 0.00 0.00 0.00 2.43
3164 3184 1.191647 CCCTCTCGAACGAACAAAACG 59.808 52.381 0.00 0.00 0.00 3.60
3173 3193 0.651551 CGAACAAAACGGACGAACCA 59.348 50.000 0.00 0.00 38.90 3.67
3209 3229 4.740822 ATCCCCACCCGCAAGTGC 62.741 66.667 0.00 0.00 36.38 4.40
3261 3281 3.560105 CCTTCTCAATCCAAATCCTCCC 58.440 50.000 0.00 0.00 0.00 4.30
3280 3300 1.683917 CCTCGATCCAACTCCTTCGAT 59.316 52.381 0.00 0.00 39.59 3.59
3283 3303 2.621998 TCGATCCAACTCCTTCGATACC 59.378 50.000 0.00 0.00 35.85 2.73
3293 3313 0.030235 CTTCGATACCGCCATCACGA 59.970 55.000 0.00 0.00 35.37 4.35
3299 3319 0.108520 TACCGCCATCACGAAACTCC 60.109 55.000 0.00 0.00 34.06 3.85
3300 3320 1.375396 CCGCCATCACGAAACTCCA 60.375 57.895 0.00 0.00 34.06 3.86
3301 3321 1.361668 CCGCCATCACGAAACTCCAG 61.362 60.000 0.00 0.00 34.06 3.86
3302 3322 1.361668 CGCCATCACGAAACTCCAGG 61.362 60.000 0.00 0.00 34.06 4.45
3310 3330 0.389948 CGAAACTCCAGGGTTCCGAG 60.390 60.000 0.00 0.00 38.35 4.63
3312 3332 2.125766 AAACTCCAGGGTTCCGAGCC 62.126 60.000 0.00 0.00 43.96 4.70
3339 3359 1.296832 TCCCAATCCTCCCACCTATGA 59.703 52.381 0.00 0.00 0.00 2.15
3345 3365 1.285667 TCCTCCCACCTATGACGTACA 59.714 52.381 0.00 0.00 0.00 2.90
3358 3378 2.356695 TGACGTACATAGATGGGTGTCG 59.643 50.000 0.00 0.00 32.44 4.35
3362 3382 1.956170 CATAGATGGGTGTCGCCGC 60.956 63.158 0.00 0.00 38.44 6.53
3389 3409 1.410882 CTTCTCCTTCTCCATCGACCC 59.589 57.143 0.00 0.00 0.00 4.46
3391 3411 0.687757 CTCCTTCTCCATCGACCCCA 60.688 60.000 0.00 0.00 0.00 4.96
3413 3433 3.429141 CAGGCCGCAGCAAGTCAG 61.429 66.667 0.00 0.00 42.56 3.51
3419 3439 2.960170 GCAGCAAGTCAGCCAAGG 59.040 61.111 0.00 0.00 34.23 3.61
3431 3451 4.659172 CCAAGGCGGCAACCTCCA 62.659 66.667 13.08 0.00 39.93 3.86
3432 3452 3.365265 CAAGGCGGCAACCTCCAC 61.365 66.667 13.08 0.00 39.93 4.02
3481 3501 2.472909 GCGGCTTGAAATCGAGGGG 61.473 63.158 0.00 0.00 0.00 4.79
3503 3523 1.141881 CCTGTGGAACCGATCTCCG 59.858 63.158 0.00 0.00 35.55 4.63
3506 3526 1.226603 GTGGAACCGATCTCCGTCG 60.227 63.158 0.00 0.00 41.13 5.12
3567 3587 3.695606 GTGGCTGACGGGCTGAGA 61.696 66.667 9.53 0.00 41.48 3.27
3568 3588 2.685017 TGGCTGACGGGCTGAGAT 60.685 61.111 9.53 0.00 41.48 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
451 453 1.553706 AGTCCCGGTTTAGTCACGAT 58.446 50.000 0.00 0.00 0.00 3.73
521 523 2.359975 CCTTCAGCCACCCCGTTC 60.360 66.667 0.00 0.00 0.00 3.95
522 524 2.852075 TCCTTCAGCCACCCCGTT 60.852 61.111 0.00 0.00 0.00 4.44
524 526 2.592993 TTCTCCTTCAGCCACCCCG 61.593 63.158 0.00 0.00 0.00 5.73
525 527 1.002011 GTTCTCCTTCAGCCACCCC 60.002 63.158 0.00 0.00 0.00 4.95
526 528 1.376037 CGTTCTCCTTCAGCCACCC 60.376 63.158 0.00 0.00 0.00 4.61
527 529 2.035442 GCGTTCTCCTTCAGCCACC 61.035 63.158 0.00 0.00 0.00 4.61
528 530 0.246635 TAGCGTTCTCCTTCAGCCAC 59.753 55.000 0.00 0.00 0.00 5.01
529 531 0.532573 CTAGCGTTCTCCTTCAGCCA 59.467 55.000 0.00 0.00 0.00 4.75
530 532 0.179097 CCTAGCGTTCTCCTTCAGCC 60.179 60.000 0.00 0.00 0.00 4.85
531 533 0.179097 CCCTAGCGTTCTCCTTCAGC 60.179 60.000 0.00 0.00 0.00 4.26
532 534 1.187087 ACCCTAGCGTTCTCCTTCAG 58.813 55.000 0.00 0.00 0.00 3.02
534 536 1.469423 CGAACCCTAGCGTTCTCCTTC 60.469 57.143 16.24 0.00 40.03 3.46
535 537 0.531200 CGAACCCTAGCGTTCTCCTT 59.469 55.000 16.24 0.00 40.03 3.36
536 538 1.946475 GCGAACCCTAGCGTTCTCCT 61.946 60.000 16.24 0.00 40.03 3.69
537 539 1.518792 GCGAACCCTAGCGTTCTCC 60.519 63.158 16.24 5.65 40.03 3.71
539 541 1.946475 GAGGCGAACCCTAGCGTTCT 61.946 60.000 16.24 0.32 46.60 3.01
540 542 1.518792 GAGGCGAACCCTAGCGTTC 60.519 63.158 9.79 9.79 46.60 3.95
541 543 2.577593 GAGGCGAACCCTAGCGTT 59.422 61.111 0.00 0.00 46.60 4.84
542 544 3.823330 CGAGGCGAACCCTAGCGT 61.823 66.667 0.00 0.00 46.60 5.07
545 547 4.570663 CGGCGAGGCGAACCCTAG 62.571 72.222 13.92 0.00 46.60 3.02
566 568 4.477975 CGTCTCGTCCACTCCCGC 62.478 72.222 0.00 0.00 0.00 6.13
567 569 2.254703 CTTCGTCTCGTCCACTCCCG 62.255 65.000 0.00 0.00 0.00 5.14
569 571 1.507174 CCTTCGTCTCGTCCACTCC 59.493 63.158 0.00 0.00 0.00 3.85
571 573 0.961358 CTCCCTTCGTCTCGTCCACT 60.961 60.000 0.00 0.00 0.00 4.00
572 574 1.507174 CTCCCTTCGTCTCGTCCAC 59.493 63.158 0.00 0.00 0.00 4.02
573 575 1.677966 CCTCCCTTCGTCTCGTCCA 60.678 63.158 0.00 0.00 0.00 4.02
574 576 3.066233 GCCTCCCTTCGTCTCGTCC 62.066 68.421 0.00 0.00 0.00 4.79
575 577 2.490685 GCCTCCCTTCGTCTCGTC 59.509 66.667 0.00 0.00 0.00 4.20
577 579 3.441290 ACGCCTCCCTTCGTCTCG 61.441 66.667 0.00 0.00 33.09 4.04
578 580 2.156051 AACACGCCTCCCTTCGTCTC 62.156 60.000 0.00 0.00 36.73 3.36
579 581 2.156051 GAACACGCCTCCCTTCGTCT 62.156 60.000 0.00 0.00 36.73 4.18
580 582 1.737008 GAACACGCCTCCCTTCGTC 60.737 63.158 0.00 0.00 36.73 4.20
585 587 0.464916 AAAAACGAACACGCCTCCCT 60.465 50.000 0.00 0.00 0.00 4.20
586 588 2.027325 AAAAACGAACACGCCTCCC 58.973 52.632 0.00 0.00 0.00 4.30
605 607 7.713507 TCGACACTTCAAATTTTCTTCTTAGGA 59.286 33.333 0.00 0.00 0.00 2.94
606 608 7.861630 TCGACACTTCAAATTTTCTTCTTAGG 58.138 34.615 0.00 0.00 0.00 2.69
607 609 8.012241 CCTCGACACTTCAAATTTTCTTCTTAG 58.988 37.037 0.00 0.00 0.00 2.18
608 610 7.713507 TCCTCGACACTTCAAATTTTCTTCTTA 59.286 33.333 0.00 0.00 0.00 2.10
609 611 6.542370 TCCTCGACACTTCAAATTTTCTTCTT 59.458 34.615 0.00 0.00 0.00 2.52
610 612 6.017852 GTCCTCGACACTTCAAATTTTCTTCT 60.018 38.462 0.00 0.00 32.09 2.85
611 613 6.017852 AGTCCTCGACACTTCAAATTTTCTTC 60.018 38.462 0.00 0.00 34.60 2.87
612 614 5.823045 AGTCCTCGACACTTCAAATTTTCTT 59.177 36.000 0.00 0.00 34.60 2.52
615 617 7.745620 AATAGTCCTCGACACTTCAAATTTT 57.254 32.000 0.00 0.00 34.60 1.82
616 618 7.745620 AAATAGTCCTCGACACTTCAAATTT 57.254 32.000 0.00 0.00 34.60 1.82
617 619 7.228706 ACAAAATAGTCCTCGACACTTCAAATT 59.771 33.333 0.00 0.00 34.60 1.82
618 620 6.710744 ACAAAATAGTCCTCGACACTTCAAAT 59.289 34.615 0.00 0.00 34.60 2.32
619 621 6.018262 CACAAAATAGTCCTCGACACTTCAAA 60.018 38.462 0.00 0.00 34.60 2.69
620 622 5.465390 CACAAAATAGTCCTCGACACTTCAA 59.535 40.000 0.00 0.00 34.60 2.69
622 624 4.989168 ACACAAAATAGTCCTCGACACTTC 59.011 41.667 0.00 0.00 34.60 3.01
623 625 4.750098 CACACAAAATAGTCCTCGACACTT 59.250 41.667 0.00 0.00 34.60 3.16
624 626 4.202223 ACACACAAAATAGTCCTCGACACT 60.202 41.667 0.00 0.00 34.60 3.55
625 627 4.056050 ACACACAAAATAGTCCTCGACAC 58.944 43.478 0.00 0.00 34.60 3.67
626 628 4.055360 CACACACAAAATAGTCCTCGACA 58.945 43.478 0.00 0.00 34.60 4.35
627 629 3.120649 GCACACACAAAATAGTCCTCGAC 60.121 47.826 0.00 0.00 0.00 4.20
629 631 2.805671 TGCACACACAAAATAGTCCTCG 59.194 45.455 0.00 0.00 0.00 4.63
630 632 5.156355 CAATGCACACACAAAATAGTCCTC 58.844 41.667 0.00 0.00 0.00 3.71
631 633 4.584325 ACAATGCACACACAAAATAGTCCT 59.416 37.500 0.00 0.00 0.00 3.85
632 634 4.681025 CACAATGCACACACAAAATAGTCC 59.319 41.667 0.00 0.00 0.00 3.85
633 635 4.148696 GCACAATGCACACACAAAATAGTC 59.851 41.667 0.00 0.00 44.26 2.59
634 636 4.050553 GCACAATGCACACACAAAATAGT 58.949 39.130 0.00 0.00 44.26 2.12
635 637 4.634349 GCACAATGCACACACAAAATAG 57.366 40.909 0.00 0.00 44.26 1.73
652 654 2.092968 CCTAAGATGCTACCTTGGCACA 60.093 50.000 0.00 0.00 42.69 4.57
653 655 2.170607 TCCTAAGATGCTACCTTGGCAC 59.829 50.000 0.00 0.00 42.69 5.01
654 656 2.477245 TCCTAAGATGCTACCTTGGCA 58.523 47.619 0.00 0.00 44.05 4.92
655 657 3.669536 GATCCTAAGATGCTACCTTGGC 58.330 50.000 0.00 0.00 30.90 4.52
656 658 3.574396 TCGATCCTAAGATGCTACCTTGG 59.426 47.826 0.00 0.00 30.90 3.61
657 659 4.855715 TCGATCCTAAGATGCTACCTTG 57.144 45.455 0.00 0.00 30.90 3.61
658 660 7.726033 AATATCGATCCTAAGATGCTACCTT 57.274 36.000 0.00 0.00 30.90 3.50
659 661 8.855110 CATAATATCGATCCTAAGATGCTACCT 58.145 37.037 0.00 0.00 30.90 3.08
660 662 8.634444 ACATAATATCGATCCTAAGATGCTACC 58.366 37.037 0.00 0.00 30.90 3.18
661 663 9.457110 CACATAATATCGATCCTAAGATGCTAC 57.543 37.037 0.00 0.00 30.90 3.58
663 665 7.343057 TCCACATAATATCGATCCTAAGATGCT 59.657 37.037 0.00 0.00 30.90 3.79
665 667 8.140628 CCTCCACATAATATCGATCCTAAGATG 58.859 40.741 0.00 1.40 30.90 2.90
666 668 7.201956 GCCTCCACATAATATCGATCCTAAGAT 60.202 40.741 0.00 0.00 34.57 2.40
667 669 6.096987 GCCTCCACATAATATCGATCCTAAGA 59.903 42.308 0.00 0.00 0.00 2.10
669 671 5.958380 AGCCTCCACATAATATCGATCCTAA 59.042 40.000 0.00 0.00 0.00 2.69
670 672 5.519808 AGCCTCCACATAATATCGATCCTA 58.480 41.667 0.00 0.00 0.00 2.94
672 674 4.744795 AGCCTCCACATAATATCGATCC 57.255 45.455 0.00 0.00 0.00 3.36
673 675 5.285651 GCTAGCCTCCACATAATATCGATC 58.714 45.833 0.00 0.00 0.00 3.69
674 676 4.202060 CGCTAGCCTCCACATAATATCGAT 60.202 45.833 9.66 2.16 0.00 3.59
675 677 3.128764 CGCTAGCCTCCACATAATATCGA 59.871 47.826 9.66 0.00 0.00 3.59
676 678 3.439293 CGCTAGCCTCCACATAATATCG 58.561 50.000 9.66 0.00 0.00 2.92
677 679 3.190874 GCGCTAGCCTCCACATAATATC 58.809 50.000 9.66 0.00 37.42 1.63
678 680 2.567169 TGCGCTAGCCTCCACATAATAT 59.433 45.455 9.73 0.00 44.33 1.28
679 681 1.967779 TGCGCTAGCCTCCACATAATA 59.032 47.619 9.73 0.00 44.33 0.98
680 682 0.758734 TGCGCTAGCCTCCACATAAT 59.241 50.000 9.73 0.00 44.33 1.28
681 683 0.104855 CTGCGCTAGCCTCCACATAA 59.895 55.000 9.73 0.00 44.33 1.90
683 685 1.406065 ATCTGCGCTAGCCTCCACAT 61.406 55.000 9.73 0.00 44.33 3.21
684 686 1.617018 AATCTGCGCTAGCCTCCACA 61.617 55.000 9.73 0.00 44.33 4.17
685 687 1.144936 AATCTGCGCTAGCCTCCAC 59.855 57.895 9.73 0.00 44.33 4.02
686 688 1.144716 CAATCTGCGCTAGCCTCCA 59.855 57.895 9.73 3.17 44.33 3.86
688 690 2.605030 CTATCAATCTGCGCTAGCCTC 58.395 52.381 9.73 1.59 44.33 4.70
689 691 1.274728 CCTATCAATCTGCGCTAGCCT 59.725 52.381 9.73 0.00 44.33 4.58
690 692 1.001406 ACCTATCAATCTGCGCTAGCC 59.999 52.381 9.73 2.49 44.33 3.93
691 693 2.029470 AGACCTATCAATCTGCGCTAGC 60.029 50.000 9.73 4.06 45.41 3.42
692 694 3.573598 CAGACCTATCAATCTGCGCTAG 58.426 50.000 9.73 4.58 36.22 3.42
694 696 2.522836 CAGACCTATCAATCTGCGCT 57.477 50.000 9.73 0.00 36.22 5.92
700 702 5.349817 CCGACATTATGCAGACCTATCAATC 59.650 44.000 0.00 0.00 0.00 2.67
701 703 5.221722 ACCGACATTATGCAGACCTATCAAT 60.222 40.000 0.00 0.00 0.00 2.57
706 708 2.364324 GGACCGACATTATGCAGACCTA 59.636 50.000 0.00 0.00 0.00 3.08
708 710 1.583054 GGACCGACATTATGCAGACC 58.417 55.000 0.00 0.00 0.00 3.85
709 711 1.134521 TGGGACCGACATTATGCAGAC 60.135 52.381 0.00 0.00 0.00 3.51
710 712 1.138859 CTGGGACCGACATTATGCAGA 59.861 52.381 0.00 0.00 0.00 4.26
711 713 1.134401 ACTGGGACCGACATTATGCAG 60.134 52.381 0.00 0.00 0.00 4.41
712 714 0.908910 ACTGGGACCGACATTATGCA 59.091 50.000 0.00 0.00 0.00 3.96
713 715 1.299541 CACTGGGACCGACATTATGC 58.700 55.000 0.00 0.00 0.00 3.14
714 716 1.134401 AGCACTGGGACCGACATTATG 60.134 52.381 0.00 0.00 0.00 1.90
715 717 1.204146 AGCACTGGGACCGACATTAT 58.796 50.000 0.00 0.00 0.00 1.28
717 719 0.537188 CTAGCACTGGGACCGACATT 59.463 55.000 0.00 0.00 0.00 2.71
718 720 1.961180 GCTAGCACTGGGACCGACAT 61.961 60.000 10.63 0.00 0.00 3.06
719 721 2.646175 GCTAGCACTGGGACCGACA 61.646 63.158 10.63 0.00 0.00 4.35
720 722 1.035932 TAGCTAGCACTGGGACCGAC 61.036 60.000 18.83 0.00 0.00 4.79
721 723 0.106167 ATAGCTAGCACTGGGACCGA 60.106 55.000 18.83 0.00 0.00 4.69
723 725 1.486726 ACAATAGCTAGCACTGGGACC 59.513 52.381 18.83 0.00 0.00 4.46
724 726 2.990066 ACAATAGCTAGCACTGGGAC 57.010 50.000 18.83 0.00 0.00 4.46
725 727 3.107601 AGAACAATAGCTAGCACTGGGA 58.892 45.455 18.83 0.00 0.00 4.37
726 728 3.550437 AGAACAATAGCTAGCACTGGG 57.450 47.619 18.83 4.71 0.00 4.45
727 729 4.331168 GTGAAGAACAATAGCTAGCACTGG 59.669 45.833 18.83 6.21 0.00 4.00
728 730 4.931601 TGTGAAGAACAATAGCTAGCACTG 59.068 41.667 18.83 12.87 35.24 3.66
729 731 5.047021 TCTGTGAAGAACAATAGCTAGCACT 60.047 40.000 18.83 0.00 38.67 4.40
730 732 5.171476 TCTGTGAAGAACAATAGCTAGCAC 58.829 41.667 18.83 1.83 38.67 4.40
731 733 5.405935 TCTGTGAAGAACAATAGCTAGCA 57.594 39.130 18.83 3.19 38.67 3.49
732 734 6.045318 TGATCTGTGAAGAACAATAGCTAGC 58.955 40.000 6.62 6.62 38.67 3.42
733 735 7.763528 ACTTGATCTGTGAAGAACAATAGCTAG 59.236 37.037 0.00 0.00 38.67 3.42
734 736 7.615403 ACTTGATCTGTGAAGAACAATAGCTA 58.385 34.615 0.00 0.00 38.67 3.32
735 737 6.471146 ACTTGATCTGTGAAGAACAATAGCT 58.529 36.000 0.00 0.00 38.67 3.32
736 738 6.734104 ACTTGATCTGTGAAGAACAATAGC 57.266 37.500 0.00 0.00 38.67 2.97
745 747 9.855361 CGCTAAATTATAACTTGATCTGTGAAG 57.145 33.333 0.00 0.00 0.00 3.02
746 748 8.826710 CCGCTAAATTATAACTTGATCTGTGAA 58.173 33.333 0.00 0.00 0.00 3.18
748 750 8.365399 TCCGCTAAATTATAACTTGATCTGTG 57.635 34.615 0.00 0.00 0.00 3.66
749 751 9.561069 AATCCGCTAAATTATAACTTGATCTGT 57.439 29.630 0.00 0.00 0.00 3.41
752 754 8.660968 GCAATCCGCTAAATTATAACTTGATC 57.339 34.615 0.00 0.00 37.77 2.92
799 801 9.559732 CATCCAATACTATACCTCAAATGTTCA 57.440 33.333 0.00 0.00 0.00 3.18
800 802 9.778741 TCATCCAATACTATACCTCAAATGTTC 57.221 33.333 0.00 0.00 0.00 3.18
801 803 9.561069 GTCATCCAATACTATACCTCAAATGTT 57.439 33.333 0.00 0.00 0.00 2.71
802 804 7.872993 CGTCATCCAATACTATACCTCAAATGT 59.127 37.037 0.00 0.00 0.00 2.71
804 806 7.386851 CCGTCATCCAATACTATACCTCAAAT 58.613 38.462 0.00 0.00 0.00 2.32
805 807 6.239487 CCCGTCATCCAATACTATACCTCAAA 60.239 42.308 0.00 0.00 0.00 2.69
806 808 5.245301 CCCGTCATCCAATACTATACCTCAA 59.755 44.000 0.00 0.00 0.00 3.02
808 810 4.381718 GCCCGTCATCCAATACTATACCTC 60.382 50.000 0.00 0.00 0.00 3.85
810 812 3.514309 AGCCCGTCATCCAATACTATACC 59.486 47.826 0.00 0.00 0.00 2.73
811 813 4.381718 GGAGCCCGTCATCCAATACTATAC 60.382 50.000 0.00 0.00 35.54 1.47
812 814 3.767673 GGAGCCCGTCATCCAATACTATA 59.232 47.826 0.00 0.00 35.54 1.31
813 815 2.567615 GGAGCCCGTCATCCAATACTAT 59.432 50.000 0.00 0.00 35.54 2.12
814 816 1.968493 GGAGCCCGTCATCCAATACTA 59.032 52.381 0.00 0.00 35.54 1.82
815 817 0.759346 GGAGCCCGTCATCCAATACT 59.241 55.000 0.00 0.00 35.54 2.12
816 818 0.250338 GGGAGCCCGTCATCCAATAC 60.250 60.000 0.00 0.00 37.33 1.89
819 821 2.609299 TGGGAGCCCGTCATCCAA 60.609 61.111 0.29 0.00 37.33 3.53
821 823 2.666596 GATGTGGGAGCCCGTCATCC 62.667 65.000 22.05 11.44 40.57 3.51
823 825 1.976132 CTGATGTGGGAGCCCGTCAT 61.976 60.000 13.33 13.33 39.42 3.06
827 829 2.124983 CACTGATGTGGGAGCCCG 60.125 66.667 0.29 0.00 40.33 6.13
836 838 1.593196 CCGTCCACAAACACTGATGT 58.407 50.000 0.00 0.00 42.46 3.06
838 840 0.472471 ACCCGTCCACAAACACTGAT 59.528 50.000 0.00 0.00 0.00 2.90
840 842 2.021722 CACCCGTCCACAAACACTG 58.978 57.895 0.00 0.00 0.00 3.66
841 843 1.822186 GCACCCGTCCACAAACACT 60.822 57.895 0.00 0.00 0.00 3.55
842 844 2.719354 GCACCCGTCCACAAACAC 59.281 61.111 0.00 0.00 0.00 3.32
861 863 3.640000 GCATCAACCCGCGGATCG 61.640 66.667 30.73 13.32 38.08 3.69
867 869 2.914908 AAACACCGCATCAACCCGC 61.915 57.895 0.00 0.00 0.00 6.13
868 870 1.081509 CAAACACCGCATCAACCCG 60.082 57.895 0.00 0.00 0.00 5.28
870 872 0.387565 AACCAAACACCGCATCAACC 59.612 50.000 0.00 0.00 0.00 3.77
871 873 2.217429 AAACCAAACACCGCATCAAC 57.783 45.000 0.00 0.00 0.00 3.18
872 874 2.287069 CGTAAACCAAACACCGCATCAA 60.287 45.455 0.00 0.00 0.00 2.57
933 935 5.930569 GGAGAGGCGACTTACTTTTAAAAGA 59.069 40.000 29.97 13.72 44.43 2.52
943 945 3.127030 CCATTTTTGGAGAGGCGACTTAC 59.873 47.826 0.00 0.00 44.43 2.34
944 946 3.008594 TCCATTTTTGGAGAGGCGACTTA 59.991 43.478 0.00 0.00 34.74 2.24
992 994 1.287730 GACAGGTGAGCTGAGCAACG 61.288 60.000 19.57 0.00 0.00 4.10
1006 1008 7.659390 GGAAGAATTGAGTGATAATAGGACAGG 59.341 40.741 0.00 0.00 0.00 4.00
1007 1009 7.383572 CGGAAGAATTGAGTGATAATAGGACAG 59.616 40.741 0.00 0.00 0.00 3.51
1010 1012 6.183360 TGCGGAAGAATTGAGTGATAATAGGA 60.183 38.462 0.00 0.00 0.00 2.94
1012 1014 7.148507 GGATGCGGAAGAATTGAGTGATAATAG 60.149 40.741 0.00 0.00 0.00 1.73
1013 1015 6.650807 GGATGCGGAAGAATTGAGTGATAATA 59.349 38.462 0.00 0.00 0.00 0.98
1014 1016 5.471456 GGATGCGGAAGAATTGAGTGATAAT 59.529 40.000 0.00 0.00 0.00 1.28
1024 1026 3.458189 CTCTAACGGATGCGGAAGAATT 58.542 45.455 12.44 0.00 0.00 2.17
1056 1058 2.104144 CGCCATTGTAGACGTACGTAC 58.896 52.381 22.87 17.33 30.95 3.67
1121 1123 1.611977 ACGAGAATGAAGTGTGTCGGA 59.388 47.619 0.00 0.00 0.00 4.55
1134 1136 2.058595 CCACGAGGGGGACGAGAAT 61.059 63.158 0.00 0.00 34.70 2.40
1260 1262 4.498520 CCGTGCAGAGTCGGCGAT 62.499 66.667 14.79 1.58 40.28 4.58
1343 1345 3.649277 GATGTCGTCGCCACAGCCT 62.649 63.158 0.00 0.00 34.57 4.58
1367 1369 1.682087 GCCTGGAACATGGGGACTAAC 60.682 57.143 0.00 0.00 38.20 2.34
1445 1447 2.392821 CTGTCGTAGATGATGCAGCTC 58.607 52.381 2.53 0.00 40.67 4.09
1646 1648 1.743252 CAAGAAGGCGGAGGAGCAC 60.743 63.158 0.00 0.00 39.27 4.40
1709 1714 2.279851 CCGTCGGCCATGCGAATA 60.280 61.111 2.24 0.00 0.00 1.75
1739 1744 0.679002 CCTCGAGGTCCAGGAACGTA 60.679 60.000 24.04 0.00 30.32 3.57
1859 1864 1.228769 GGGTTTGTCCTTGTCCCCC 60.229 63.158 0.00 0.00 36.25 5.40
2237 2242 2.203153 AAGTGTGGCCACGTCACC 60.203 61.111 30.07 15.06 46.56 4.02
2249 2254 0.179018 GGAACTGGTCTGCCAAGTGT 60.179 55.000 0.00 0.00 45.51 3.55
2456 2476 0.995675 AACCTCCTATGGCCATGGCT 60.996 55.000 34.70 19.81 41.60 4.75
2480 2500 1.908066 GCCGCGTCAGGTTTTGGTAG 61.908 60.000 4.92 0.00 0.00 3.18
2493 2513 2.361119 TGAATCTCTGTATTAGCCGCGT 59.639 45.455 4.92 0.00 0.00 6.01
2501 2521 2.427453 ACTCGGCGTGAATCTCTGTATT 59.573 45.455 16.57 0.00 0.00 1.89
2519 2539 0.458669 CCTTGCCATTGCCATCACTC 59.541 55.000 0.00 0.00 36.33 3.51
2521 2541 0.896923 TTCCTTGCCATTGCCATCAC 59.103 50.000 0.00 0.00 36.33 3.06
2524 2544 0.899720 CTGTTCCTTGCCATTGCCAT 59.100 50.000 0.00 0.00 36.33 4.40
2525 2545 0.469705 ACTGTTCCTTGCCATTGCCA 60.470 50.000 0.00 0.00 36.33 4.92
2526 2546 1.544724 TACTGTTCCTTGCCATTGCC 58.455 50.000 0.00 0.00 36.33 4.52
2527 2547 3.658757 TTTACTGTTCCTTGCCATTGC 57.341 42.857 0.00 0.00 38.26 3.56
2528 2548 5.841810 TCTTTTTACTGTTCCTTGCCATTG 58.158 37.500 0.00 0.00 0.00 2.82
2529 2549 6.670695 ATCTTTTTACTGTTCCTTGCCATT 57.329 33.333 0.00 0.00 0.00 3.16
2533 2553 8.141909 AGGTTTAATCTTTTTACTGTTCCTTGC 58.858 33.333 0.00 0.00 0.00 4.01
2557 2577 8.213679 TCTATCTCTCACCATTTTATTCCAAGG 58.786 37.037 0.00 0.00 0.00 3.61
2558 2578 9.618890 TTCTATCTCTCACCATTTTATTCCAAG 57.381 33.333 0.00 0.00 0.00 3.61
2559 2579 9.973661 TTTCTATCTCTCACCATTTTATTCCAA 57.026 29.630 0.00 0.00 0.00 3.53
2560 2580 9.973661 TTTTCTATCTCTCACCATTTTATTCCA 57.026 29.630 0.00 0.00 0.00 3.53
2569 2589 9.736414 CATCCATAATTTTCTATCTCTCACCAT 57.264 33.333 0.00 0.00 0.00 3.55
2570 2590 7.663081 GCATCCATAATTTTCTATCTCTCACCA 59.337 37.037 0.00 0.00 0.00 4.17
2571 2591 7.148507 CGCATCCATAATTTTCTATCTCTCACC 60.149 40.741 0.00 0.00 0.00 4.02
2572 2592 7.386299 ACGCATCCATAATTTTCTATCTCTCAC 59.614 37.037 0.00 0.00 0.00 3.51
2573 2593 7.445121 ACGCATCCATAATTTTCTATCTCTCA 58.555 34.615 0.00 0.00 0.00 3.27
2574 2594 7.897575 ACGCATCCATAATTTTCTATCTCTC 57.102 36.000 0.00 0.00 0.00 3.20
2575 2595 9.778741 TTTACGCATCCATAATTTTCTATCTCT 57.221 29.630 0.00 0.00 0.00 3.10
2590 2610 8.286800 GCATGTATTTAGTTATTTACGCATCCA 58.713 33.333 0.00 0.00 0.00 3.41
2591 2611 8.504005 AGCATGTATTTAGTTATTTACGCATCC 58.496 33.333 0.00 0.00 0.00 3.51
2592 2612 9.530129 GAGCATGTATTTAGTTATTTACGCATC 57.470 33.333 0.00 0.00 0.00 3.91
2593 2613 9.273016 AGAGCATGTATTTAGTTATTTACGCAT 57.727 29.630 0.00 0.00 0.00 4.73
2594 2614 8.657074 AGAGCATGTATTTAGTTATTTACGCA 57.343 30.769 0.00 0.00 0.00 5.24
2595 2615 8.761497 TGAGAGCATGTATTTAGTTATTTACGC 58.239 33.333 0.00 0.00 0.00 4.42
2600 2620 8.562892 GCATGTGAGAGCATGTATTTAGTTATT 58.437 33.333 7.71 0.00 45.75 1.40
2601 2621 7.935755 AGCATGTGAGAGCATGTATTTAGTTAT 59.064 33.333 7.71 0.00 45.75 1.89
2602 2622 7.225341 CAGCATGTGAGAGCATGTATTTAGTTA 59.775 37.037 7.71 0.00 45.75 2.24
2603 2623 6.037940 CAGCATGTGAGAGCATGTATTTAGTT 59.962 38.462 7.71 0.00 45.75 2.24
2604 2624 5.526479 CAGCATGTGAGAGCATGTATTTAGT 59.474 40.000 7.71 0.00 45.75 2.24
2605 2625 5.756833 TCAGCATGTGAGAGCATGTATTTAG 59.243 40.000 7.71 0.00 45.75 1.85
2606 2626 5.673514 TCAGCATGTGAGAGCATGTATTTA 58.326 37.500 7.71 0.00 45.75 1.40
2607 2627 4.520179 TCAGCATGTGAGAGCATGTATTT 58.480 39.130 7.71 0.00 45.75 1.40
2608 2628 4.146745 TCAGCATGTGAGAGCATGTATT 57.853 40.909 7.71 0.00 45.75 1.89
2609 2629 3.832615 TCAGCATGTGAGAGCATGTAT 57.167 42.857 7.71 0.00 45.75 2.29
2619 2639 1.600413 CGCGTATAGCTCAGCATGTGA 60.600 52.381 0.00 0.00 45.59 3.58
2620 2640 0.780596 CGCGTATAGCTCAGCATGTG 59.219 55.000 0.00 0.00 45.59 3.21
2621 2641 0.319040 CCGCGTATAGCTCAGCATGT 60.319 55.000 4.92 0.00 45.59 3.21
2622 2642 0.319040 ACCGCGTATAGCTCAGCATG 60.319 55.000 4.92 0.00 45.59 4.06
2623 2643 0.039074 GACCGCGTATAGCTCAGCAT 60.039 55.000 4.92 0.00 45.59 3.79
2624 2644 1.359117 GACCGCGTATAGCTCAGCA 59.641 57.895 4.92 0.00 45.59 4.41
2625 2645 0.661780 CTGACCGCGTATAGCTCAGC 60.662 60.000 4.92 0.00 45.59 4.26
2626 2646 0.661780 GCTGACCGCGTATAGCTCAG 60.662 60.000 15.57 10.94 45.55 3.35
2627 2647 1.359117 GCTGACCGCGTATAGCTCA 59.641 57.895 15.57 2.23 45.59 4.26
2628 2648 0.039074 ATGCTGACCGCGTATAGCTC 60.039 55.000 20.96 1.94 45.59 4.09
2629 2649 0.389391 AATGCTGACCGCGTATAGCT 59.611 50.000 20.96 0.00 45.59 3.32
2630 2650 1.719780 GTAATGCTGACCGCGTATAGC 59.280 52.381 15.87 15.87 43.27 2.97
2631 2651 2.325761 GGTAATGCTGACCGCGTATAG 58.674 52.381 4.92 0.37 43.27 1.31
2632 2652 1.000060 GGGTAATGCTGACCGCGTATA 60.000 52.381 4.92 0.00 43.27 1.47
2633 2653 0.249741 GGGTAATGCTGACCGCGTAT 60.250 55.000 4.92 0.00 43.27 3.06
2634 2654 1.142314 GGGTAATGCTGACCGCGTA 59.858 57.895 4.92 0.00 43.27 4.42
2635 2655 2.125269 GGGTAATGCTGACCGCGT 60.125 61.111 4.92 0.00 43.27 6.01
2636 2656 1.883084 GAGGGTAATGCTGACCGCG 60.883 63.158 0.00 0.00 43.27 6.46
2637 2657 0.179045 ATGAGGGTAATGCTGACCGC 60.179 55.000 0.00 0.00 37.90 5.68
2638 2658 1.138859 TGATGAGGGTAATGCTGACCG 59.861 52.381 0.00 0.00 37.90 4.79
2639 2659 3.498774 ATGATGAGGGTAATGCTGACC 57.501 47.619 0.00 0.00 36.12 4.02
2640 2660 3.004106 GCAATGATGAGGGTAATGCTGAC 59.996 47.826 0.00 0.00 0.00 3.51
2641 2661 3.216800 GCAATGATGAGGGTAATGCTGA 58.783 45.455 0.00 0.00 0.00 4.26
2642 2662 2.953648 TGCAATGATGAGGGTAATGCTG 59.046 45.455 0.00 0.00 33.66 4.41
2643 2663 3.301794 TGCAATGATGAGGGTAATGCT 57.698 42.857 0.00 0.00 33.66 3.79
2644 2664 4.595762 ATTGCAATGATGAGGGTAATGC 57.404 40.909 12.09 0.00 0.00 3.56
2645 2665 6.350696 CCCATATTGCAATGATGAGGGTAATG 60.351 42.308 22.27 12.38 0.00 1.90
2646 2666 5.718130 CCCATATTGCAATGATGAGGGTAAT 59.282 40.000 22.27 0.11 0.00 1.89
2647 2667 5.078949 CCCATATTGCAATGATGAGGGTAA 58.921 41.667 22.27 0.00 0.00 2.85
2648 2668 4.106179 ACCCATATTGCAATGATGAGGGTA 59.894 41.667 26.67 7.52 44.73 3.69
2649 2669 3.117016 ACCCATATTGCAATGATGAGGGT 60.117 43.478 24.34 24.34 41.95 4.34
2650 2670 3.503365 ACCCATATTGCAATGATGAGGG 58.497 45.455 22.27 23.01 39.66 4.30
2651 2671 5.319453 ACTACCCATATTGCAATGATGAGG 58.681 41.667 22.27 20.64 0.00 3.86
2652 2672 8.456471 CAATACTACCCATATTGCAATGATGAG 58.544 37.037 22.27 13.58 34.25 2.90
2653 2673 7.394077 CCAATACTACCCATATTGCAATGATGA 59.606 37.037 22.27 1.73 38.28 2.92
2654 2674 7.394077 TCCAATACTACCCATATTGCAATGATG 59.606 37.037 22.27 18.36 38.28 3.07
2655 2675 7.469343 TCCAATACTACCCATATTGCAATGAT 58.531 34.615 22.27 8.62 38.28 2.45
2656 2676 6.846988 TCCAATACTACCCATATTGCAATGA 58.153 36.000 22.27 6.62 38.28 2.57
2657 2677 6.942005 TCTCCAATACTACCCATATTGCAATG 59.058 38.462 22.27 7.66 38.28 2.82
2658 2678 7.090319 TCTCCAATACTACCCATATTGCAAT 57.910 36.000 17.56 17.56 38.28 3.56
2659 2679 6.508030 TCTCCAATACTACCCATATTGCAA 57.492 37.500 0.00 0.00 38.28 4.08
2660 2680 6.508030 TTCTCCAATACTACCCATATTGCA 57.492 37.500 0.00 0.00 38.28 4.08
2661 2681 7.398024 AGATTCTCCAATACTACCCATATTGC 58.602 38.462 0.00 0.00 38.28 3.56
2662 2682 8.820831 AGAGATTCTCCAATACTACCCATATTG 58.179 37.037 10.09 0.00 38.99 1.90
2663 2683 8.980832 AGAGATTCTCCAATACTACCCATATT 57.019 34.615 10.09 0.00 0.00 1.28
2664 2684 8.820831 CAAGAGATTCTCCAATACTACCCATAT 58.179 37.037 10.09 0.00 0.00 1.78
2665 2685 7.256332 GCAAGAGATTCTCCAATACTACCCATA 60.256 40.741 10.09 0.00 0.00 2.74
2666 2686 6.465035 GCAAGAGATTCTCCAATACTACCCAT 60.465 42.308 10.09 0.00 0.00 4.00
2667 2687 5.163301 GCAAGAGATTCTCCAATACTACCCA 60.163 44.000 10.09 0.00 0.00 4.51
2668 2688 5.163301 TGCAAGAGATTCTCCAATACTACCC 60.163 44.000 10.09 0.00 0.00 3.69
2669 2689 5.918608 TGCAAGAGATTCTCCAATACTACC 58.081 41.667 10.09 0.00 0.00 3.18
2670 2690 6.818644 TGTTGCAAGAGATTCTCCAATACTAC 59.181 38.462 10.09 4.37 0.00 2.73
2671 2691 6.946340 TGTTGCAAGAGATTCTCCAATACTA 58.054 36.000 10.09 0.00 0.00 1.82
2672 2692 5.809001 TGTTGCAAGAGATTCTCCAATACT 58.191 37.500 10.09 0.00 0.00 2.12
2673 2693 6.404074 CCTTGTTGCAAGAGATTCTCCAATAC 60.404 42.308 10.09 3.90 0.00 1.89
2674 2694 5.649395 CCTTGTTGCAAGAGATTCTCCAATA 59.351 40.000 10.09 3.77 0.00 1.90
2675 2695 4.461781 CCTTGTTGCAAGAGATTCTCCAAT 59.538 41.667 10.09 0.00 0.00 3.16
2676 2696 3.822735 CCTTGTTGCAAGAGATTCTCCAA 59.177 43.478 10.09 5.10 0.00 3.53
2677 2697 3.181440 ACCTTGTTGCAAGAGATTCTCCA 60.181 43.478 10.09 0.00 0.00 3.86
2678 2698 3.416156 ACCTTGTTGCAAGAGATTCTCC 58.584 45.455 10.09 0.00 0.00 3.71
2679 2699 5.444663 AAACCTTGTTGCAAGAGATTCTC 57.555 39.130 0.00 5.49 0.00 2.87
2680 2700 6.491403 ACATAAACCTTGTTGCAAGAGATTCT 59.509 34.615 0.00 0.00 0.00 2.40
2681 2701 6.681777 ACATAAACCTTGTTGCAAGAGATTC 58.318 36.000 0.00 0.00 0.00 2.52
2682 2702 6.655078 ACATAAACCTTGTTGCAAGAGATT 57.345 33.333 0.00 3.18 0.00 2.40
2683 2703 6.655078 AACATAAACCTTGTTGCAAGAGAT 57.345 33.333 0.00 0.00 36.02 2.75
2684 2704 6.544197 TGTAACATAAACCTTGTTGCAAGAGA 59.456 34.615 0.00 0.00 43.54 3.10
2685 2705 6.734137 TGTAACATAAACCTTGTTGCAAGAG 58.266 36.000 0.00 0.48 43.54 2.85
2686 2706 6.701145 TGTAACATAAACCTTGTTGCAAGA 57.299 33.333 0.00 0.00 43.54 3.02
2690 2710 9.471084 AAGTTTATGTAACATAAACCTTGTTGC 57.529 29.630 23.04 0.00 42.42 4.17
2702 2722 9.762933 ATCTGCAACAAAAAGTTTATGTAACAT 57.237 25.926 0.00 0.00 38.74 2.71
2734 2754 9.840427 CCACCATGTTGTAGAAATAGTTAAAAG 57.160 33.333 0.00 0.00 0.00 2.27
2735 2755 9.357161 ACCACCATGTTGTAGAAATAGTTAAAA 57.643 29.630 0.00 0.00 0.00 1.52
2736 2756 8.927675 ACCACCATGTTGTAGAAATAGTTAAA 57.072 30.769 0.00 0.00 0.00 1.52
2737 2757 8.788806 CAACCACCATGTTGTAGAAATAGTTAA 58.211 33.333 0.00 0.00 40.54 2.01
2738 2758 8.330466 CAACCACCATGTTGTAGAAATAGTTA 57.670 34.615 0.00 0.00 40.54 2.24
2739 2759 7.214467 CAACCACCATGTTGTAGAAATAGTT 57.786 36.000 0.00 0.00 40.54 2.24
2740 2760 6.817765 CAACCACCATGTTGTAGAAATAGT 57.182 37.500 0.00 0.00 40.54 2.12
2751 2771 2.199652 CCGCCACAACCACCATGTT 61.200 57.895 0.00 0.00 0.00 2.71
2752 2772 2.597217 CCGCCACAACCACCATGT 60.597 61.111 0.00 0.00 0.00 3.21
2753 2773 1.459455 TTTCCGCCACAACCACCATG 61.459 55.000 0.00 0.00 0.00 3.66
2754 2774 0.757188 TTTTCCGCCACAACCACCAT 60.757 50.000 0.00 0.00 0.00 3.55
2755 2775 0.970937 TTTTTCCGCCACAACCACCA 60.971 50.000 0.00 0.00 0.00 4.17
2756 2776 1.817209 TTTTTCCGCCACAACCACC 59.183 52.632 0.00 0.00 0.00 4.61
2772 2792 9.991388 CAACATCATCTGTGTTTCAAAATTTTT 57.009 25.926 0.00 0.00 37.69 1.94
2773 2793 8.124199 GCAACATCATCTGTGTTTCAAAATTTT 58.876 29.630 0.00 0.00 37.69 1.82
2774 2794 7.517101 CGCAACATCATCTGTGTTTCAAAATTT 60.517 33.333 0.00 0.00 37.69 1.82
2775 2795 6.074195 CGCAACATCATCTGTGTTTCAAAATT 60.074 34.615 0.00 0.00 37.69 1.82
2776 2796 5.403166 CGCAACATCATCTGTGTTTCAAAAT 59.597 36.000 0.00 0.00 37.69 1.82
2777 2797 4.739228 CGCAACATCATCTGTGTTTCAAAA 59.261 37.500 0.00 0.00 37.69 2.44
2778 2798 4.289342 CGCAACATCATCTGTGTTTCAAA 58.711 39.130 0.00 0.00 37.69 2.69
2779 2799 3.304592 CCGCAACATCATCTGTGTTTCAA 60.305 43.478 0.00 0.00 37.69 2.69
2780 2800 2.226200 CCGCAACATCATCTGTGTTTCA 59.774 45.455 0.00 0.00 37.69 2.69
2781 2801 2.483877 TCCGCAACATCATCTGTGTTTC 59.516 45.455 0.00 0.00 37.69 2.78
2782 2802 2.503331 TCCGCAACATCATCTGTGTTT 58.497 42.857 0.00 0.00 37.69 2.83
2783 2803 2.183478 TCCGCAACATCATCTGTGTT 57.817 45.000 0.00 0.00 40.23 3.32
2784 2804 2.183478 TTCCGCAACATCATCTGTGT 57.817 45.000 0.00 0.00 38.39 3.72
2785 2805 3.557577 TTTTCCGCAACATCATCTGTG 57.442 42.857 0.00 0.00 38.39 3.66
2786 2806 6.455360 AATATTTTCCGCAACATCATCTGT 57.545 33.333 0.00 0.00 40.84 3.41
2787 2807 6.291955 GCAAATATTTTCCGCAACATCATCTG 60.292 38.462 0.00 0.00 0.00 2.90
2788 2808 5.750067 GCAAATATTTTCCGCAACATCATCT 59.250 36.000 0.00 0.00 0.00 2.90
2789 2809 5.519566 TGCAAATATTTTCCGCAACATCATC 59.480 36.000 8.73 0.00 0.00 2.92
2790 2810 5.417811 TGCAAATATTTTCCGCAACATCAT 58.582 33.333 8.73 0.00 0.00 2.45
2791 2811 4.814147 TGCAAATATTTTCCGCAACATCA 58.186 34.783 8.73 0.00 0.00 3.07
2792 2812 4.864247 ACTGCAAATATTTTCCGCAACATC 59.136 37.500 11.48 0.00 31.10 3.06
2793 2813 4.819769 ACTGCAAATATTTTCCGCAACAT 58.180 34.783 11.48 0.84 31.10 2.71
2794 2814 4.250116 ACTGCAAATATTTTCCGCAACA 57.750 36.364 11.48 0.00 31.10 3.33
2795 2815 5.590104 AAACTGCAAATATTTTCCGCAAC 57.410 34.783 11.48 0.00 31.10 4.17
2796 2816 6.610741 AAAAACTGCAAATATTTTCCGCAA 57.389 29.167 11.48 0.00 31.10 4.85
2833 2853 4.616604 GCAGCAGCACTCATGATACAAAAA 60.617 41.667 0.00 0.00 41.58 1.94
2834 2854 3.119743 GCAGCAGCACTCATGATACAAAA 60.120 43.478 0.00 0.00 41.58 2.44
2835 2855 2.421073 GCAGCAGCACTCATGATACAAA 59.579 45.455 0.00 0.00 41.58 2.83
2836 2856 2.011947 GCAGCAGCACTCATGATACAA 58.988 47.619 0.00 0.00 41.58 2.41
2837 2857 1.660167 GCAGCAGCACTCATGATACA 58.340 50.000 0.00 0.00 41.58 2.29
2838 2858 0.942962 GGCAGCAGCACTCATGATAC 59.057 55.000 2.65 0.00 44.61 2.24
2839 2859 0.179037 GGGCAGCAGCACTCATGATA 60.179 55.000 2.65 0.00 42.33 2.15
2840 2860 1.453379 GGGCAGCAGCACTCATGAT 60.453 57.895 2.65 0.00 42.33 2.45
2841 2861 2.045634 GGGCAGCAGCACTCATGA 60.046 61.111 2.65 0.00 42.33 3.07
2863 2883 2.215907 TCCCGTGTGTTGCAAAATTG 57.784 45.000 0.00 0.00 0.00 2.32
2864 2884 2.102252 ACATCCCGTGTGTTGCAAAATT 59.898 40.909 0.00 0.00 40.28 1.82
2865 2885 1.686052 ACATCCCGTGTGTTGCAAAAT 59.314 42.857 0.00 0.00 40.28 1.82
2866 2886 1.107114 ACATCCCGTGTGTTGCAAAA 58.893 45.000 0.00 0.00 40.28 2.44
2867 2887 1.107114 AACATCCCGTGTGTTGCAAA 58.893 45.000 0.00 0.00 41.14 3.68
2868 2888 0.383590 CAACATCCCGTGTGTTGCAA 59.616 50.000 0.00 0.00 46.64 4.08
2869 2889 2.028936 CAACATCCCGTGTGTTGCA 58.971 52.632 10.50 0.00 46.64 4.08
2870 2890 4.942090 CAACATCCCGTGTGTTGC 57.058 55.556 10.50 0.00 46.64 4.17
2872 2892 0.179032 TCTGCAACATCCCGTGTGTT 60.179 50.000 0.00 0.00 41.14 3.32
2873 2893 0.179032 TTCTGCAACATCCCGTGTGT 60.179 50.000 0.00 0.00 41.14 3.72
2874 2894 1.167851 ATTCTGCAACATCCCGTGTG 58.832 50.000 0.00 0.00 41.14 3.82
2875 2895 1.909700 AATTCTGCAACATCCCGTGT 58.090 45.000 0.00 0.00 44.84 4.49
2876 2896 3.302365 AAAATTCTGCAACATCCCGTG 57.698 42.857 0.00 0.00 0.00 4.94
2900 2920 3.384146 TCCTTTGCATGTCTCTTTTTGCA 59.616 39.130 0.00 0.00 42.90 4.08
2901 2921 3.737774 GTCCTTTGCATGTCTCTTTTTGC 59.262 43.478 0.00 0.00 35.67 3.68
2902 2922 4.935702 TGTCCTTTGCATGTCTCTTTTTG 58.064 39.130 0.00 0.00 0.00 2.44
2903 2923 5.796424 ATGTCCTTTGCATGTCTCTTTTT 57.204 34.783 0.00 0.00 0.00 1.94
2904 2924 5.796424 AATGTCCTTTGCATGTCTCTTTT 57.204 34.783 0.00 0.00 0.00 2.27
2905 2925 5.796424 AAATGTCCTTTGCATGTCTCTTT 57.204 34.783 0.00 0.00 0.00 2.52
2906 2926 6.006449 AGTAAATGTCCTTTGCATGTCTCTT 58.994 36.000 0.00 0.00 32.40 2.85
2907 2927 5.564550 AGTAAATGTCCTTTGCATGTCTCT 58.435 37.500 0.00 0.00 32.40 3.10
2908 2928 5.886960 AGTAAATGTCCTTTGCATGTCTC 57.113 39.130 0.00 0.00 32.40 3.36
2909 2929 6.476378 ACTAGTAAATGTCCTTTGCATGTCT 58.524 36.000 0.00 0.00 32.40 3.41
2910 2930 6.743575 ACTAGTAAATGTCCTTTGCATGTC 57.256 37.500 0.00 0.00 32.40 3.06
2911 2931 7.620880 TCTACTAGTAAATGTCCTTTGCATGT 58.379 34.615 3.76 0.00 32.40 3.21
2912 2932 8.492673 TTCTACTAGTAAATGTCCTTTGCATG 57.507 34.615 3.76 0.00 32.40 4.06
2913 2933 9.515226 TTTTCTACTAGTAAATGTCCTTTGCAT 57.485 29.630 3.76 0.00 32.40 3.96
2914 2934 8.911918 TTTTCTACTAGTAAATGTCCTTTGCA 57.088 30.769 3.76 0.00 32.40 4.08
2948 2968 5.767670 AGACTACTAACTGCTCCATTAGGA 58.232 41.667 0.00 0.00 43.21 2.94
2949 2969 5.830991 AGAGACTACTAACTGCTCCATTAGG 59.169 44.000 0.00 0.00 33.47 2.69
2950 2970 6.952773 AGAGACTACTAACTGCTCCATTAG 57.047 41.667 0.00 0.00 35.03 1.73
2951 2971 8.998277 AATAGAGACTACTAACTGCTCCATTA 57.002 34.615 0.00 0.00 0.00 1.90
2952 2972 7.014808 GGAATAGAGACTACTAACTGCTCCATT 59.985 40.741 0.00 0.00 0.00 3.16
2953 2973 6.492087 GGAATAGAGACTACTAACTGCTCCAT 59.508 42.308 0.00 0.00 0.00 3.41
2954 2974 5.828859 GGAATAGAGACTACTAACTGCTCCA 59.171 44.000 0.00 0.00 0.00 3.86
2955 2975 5.049267 CGGAATAGAGACTACTAACTGCTCC 60.049 48.000 0.00 0.00 0.00 4.70
2956 2976 5.049267 CCGGAATAGAGACTACTAACTGCTC 60.049 48.000 0.00 0.00 0.00 4.26
2957 2977 4.822896 CCGGAATAGAGACTACTAACTGCT 59.177 45.833 0.00 0.00 0.00 4.24
2958 2978 4.023021 CCCGGAATAGAGACTACTAACTGC 60.023 50.000 0.73 0.00 0.00 4.40
2959 2979 5.131784 ACCCGGAATAGAGACTACTAACTG 58.868 45.833 0.73 0.00 0.00 3.16
2960 2980 5.385628 ACCCGGAATAGAGACTACTAACT 57.614 43.478 0.73 0.00 0.00 2.24
2961 2981 6.462552 AAACCCGGAATAGAGACTACTAAC 57.537 41.667 0.73 0.00 0.00 2.34
2962 2982 7.486407 AAAAACCCGGAATAGAGACTACTAA 57.514 36.000 0.73 0.00 0.00 2.24
2983 3003 0.105913 GGTGGGAGGTGGGACAAAAA 60.106 55.000 0.00 0.00 44.16 1.94
2984 3004 0.996762 AGGTGGGAGGTGGGACAAAA 60.997 55.000 0.00 0.00 44.16 2.44
2985 3005 0.996762 AAGGTGGGAGGTGGGACAAA 60.997 55.000 0.00 0.00 44.16 2.83
2986 3006 1.386772 AAGGTGGGAGGTGGGACAA 60.387 57.895 0.00 0.00 44.16 3.18
2987 3007 1.846124 GAAGGTGGGAGGTGGGACA 60.846 63.158 0.00 0.00 0.00 4.02
2988 3008 2.955881 CGAAGGTGGGAGGTGGGAC 61.956 68.421 0.00 0.00 0.00 4.46
2989 3009 2.606519 CGAAGGTGGGAGGTGGGA 60.607 66.667 0.00 0.00 0.00 4.37
2990 3010 2.928396 ACGAAGGTGGGAGGTGGG 60.928 66.667 0.00 0.00 0.00 4.61
2991 3011 0.613853 TAGACGAAGGTGGGAGGTGG 60.614 60.000 0.00 0.00 0.00 4.61
2992 3012 0.818296 CTAGACGAAGGTGGGAGGTG 59.182 60.000 0.00 0.00 0.00 4.00
2993 3013 0.408700 ACTAGACGAAGGTGGGAGGT 59.591 55.000 0.00 0.00 0.00 3.85
2994 3014 1.558233 AACTAGACGAAGGTGGGAGG 58.442 55.000 0.00 0.00 0.00 4.30
2995 3015 2.826725 AGAAACTAGACGAAGGTGGGAG 59.173 50.000 0.00 0.00 0.00 4.30
2996 3016 2.885616 AGAAACTAGACGAAGGTGGGA 58.114 47.619 0.00 0.00 0.00 4.37
2997 3017 3.679824 AAGAAACTAGACGAAGGTGGG 57.320 47.619 0.00 0.00 0.00 4.61
2998 3018 4.150098 CGAAAAGAAACTAGACGAAGGTGG 59.850 45.833 0.00 0.00 0.00 4.61
2999 3019 4.743644 ACGAAAAGAAACTAGACGAAGGTG 59.256 41.667 0.00 0.00 0.00 4.00
3000 3020 4.941657 ACGAAAAGAAACTAGACGAAGGT 58.058 39.130 0.00 0.00 0.00 3.50
3001 3021 4.385146 GGACGAAAAGAAACTAGACGAAGG 59.615 45.833 0.00 0.00 0.00 3.46
3002 3022 5.221130 AGGACGAAAAGAAACTAGACGAAG 58.779 41.667 0.00 0.00 0.00 3.79
3003 3023 5.192327 AGGACGAAAAGAAACTAGACGAA 57.808 39.130 0.00 0.00 0.00 3.85
3004 3024 4.320788 GGAGGACGAAAAGAAACTAGACGA 60.321 45.833 0.00 0.00 0.00 4.20
3005 3025 3.919197 GGAGGACGAAAAGAAACTAGACG 59.081 47.826 0.00 0.00 0.00 4.18
3006 3026 5.136816 AGGAGGACGAAAAGAAACTAGAC 57.863 43.478 0.00 0.00 0.00 2.59
3007 3027 4.220163 GGAGGAGGACGAAAAGAAACTAGA 59.780 45.833 0.00 0.00 0.00 2.43
3008 3028 4.496360 GGAGGAGGACGAAAAGAAACTAG 58.504 47.826 0.00 0.00 0.00 2.57
3009 3029 3.260128 GGGAGGAGGACGAAAAGAAACTA 59.740 47.826 0.00 0.00 0.00 2.24
3010 3030 2.038689 GGGAGGAGGACGAAAAGAAACT 59.961 50.000 0.00 0.00 0.00 2.66
3011 3031 2.224450 TGGGAGGAGGACGAAAAGAAAC 60.224 50.000 0.00 0.00 0.00 2.78
3012 3032 2.051692 TGGGAGGAGGACGAAAAGAAA 58.948 47.619 0.00 0.00 0.00 2.52
3013 3033 1.346722 GTGGGAGGAGGACGAAAAGAA 59.653 52.381 0.00 0.00 0.00 2.52
3014 3034 0.974383 GTGGGAGGAGGACGAAAAGA 59.026 55.000 0.00 0.00 0.00 2.52
3015 3035 0.036294 GGTGGGAGGAGGACGAAAAG 60.036 60.000 0.00 0.00 0.00 2.27
3016 3036 0.473117 AGGTGGGAGGAGGACGAAAA 60.473 55.000 0.00 0.00 0.00 2.29
3017 3037 0.903454 GAGGTGGGAGGAGGACGAAA 60.903 60.000 0.00 0.00 0.00 3.46
3018 3038 1.305046 GAGGTGGGAGGAGGACGAA 60.305 63.158 0.00 0.00 0.00 3.85
3019 3039 2.359404 GAGGTGGGAGGAGGACGA 59.641 66.667 0.00 0.00 0.00 4.20
3020 3040 2.760385 GGAGGTGGGAGGAGGACG 60.760 72.222 0.00 0.00 0.00 4.79
3021 3041 2.365768 GGGAGGTGGGAGGAGGAC 60.366 72.222 0.00 0.00 0.00 3.85
3022 3042 2.874245 TGGGAGGTGGGAGGAGGA 60.874 66.667 0.00 0.00 0.00 3.71
3023 3043 2.366167 CTGGGAGGTGGGAGGAGG 60.366 72.222 0.00 0.00 0.00 4.30
3024 3044 2.366167 CCTGGGAGGTGGGAGGAG 60.366 72.222 0.00 0.00 0.00 3.69
3033 3053 1.745320 CGGGATCGTTACCTGGGAGG 61.745 65.000 0.00 0.00 42.49 4.30
3034 3054 1.740285 CGGGATCGTTACCTGGGAG 59.260 63.158 0.00 0.00 0.00 4.30
3035 3055 3.944123 CGGGATCGTTACCTGGGA 58.056 61.111 0.00 0.00 0.00 4.37
3074 3094 3.398318 AAGTGGTCTTGGTCCCTTTTT 57.602 42.857 0.00 0.00 32.09 1.94
3075 3095 3.750922 GCTAAGTGGTCTTGGTCCCTTTT 60.751 47.826 0.00 0.00 35.13 2.27
3076 3096 2.224793 GCTAAGTGGTCTTGGTCCCTTT 60.225 50.000 0.00 0.00 35.13 3.11
3077 3097 1.351350 GCTAAGTGGTCTTGGTCCCTT 59.649 52.381 0.00 0.00 35.13 3.95
3078 3098 0.984995 GCTAAGTGGTCTTGGTCCCT 59.015 55.000 0.00 0.00 35.13 4.20
3079 3099 0.391263 CGCTAAGTGGTCTTGGTCCC 60.391 60.000 0.00 0.00 35.13 4.46
3080 3100 0.606604 TCGCTAAGTGGTCTTGGTCC 59.393 55.000 0.00 0.00 35.13 4.46
3081 3101 1.404315 CCTCGCTAAGTGGTCTTGGTC 60.404 57.143 0.00 0.00 35.13 4.02
3082 3102 0.608640 CCTCGCTAAGTGGTCTTGGT 59.391 55.000 0.00 0.00 35.13 3.67
3083 3103 0.741221 GCCTCGCTAAGTGGTCTTGG 60.741 60.000 0.00 0.00 35.96 3.61
3084 3104 0.741221 GGCCTCGCTAAGTGGTCTTG 60.741 60.000 0.00 0.00 35.36 3.02
3085 3105 1.597461 GGCCTCGCTAAGTGGTCTT 59.403 57.895 0.00 0.00 35.36 3.01
3086 3106 2.359967 GGGCCTCGCTAAGTGGTCT 61.360 63.158 0.84 0.00 38.15 3.85
3087 3107 2.187163 GGGCCTCGCTAAGTGGTC 59.813 66.667 0.84 0.00 37.38 4.02
3088 3108 3.400054 GGGGCCTCGCTAAGTGGT 61.400 66.667 0.84 0.00 35.96 4.16
3089 3109 3.083997 AGGGGCCTCGCTAAGTGG 61.084 66.667 0.84 0.00 34.19 4.00
3090 3110 2.501610 GAGGGGCCTCGCTAAGTG 59.498 66.667 0.84 0.00 36.23 3.16
3098 3118 0.604511 TTTTTCGTTCGAGGGGCCTC 60.605 55.000 0.84 0.00 39.55 4.70
3099 3119 1.452801 TTTTTCGTTCGAGGGGCCT 59.547 52.632 0.84 0.00 0.00 5.19
3100 3120 4.068280 TTTTTCGTTCGAGGGGCC 57.932 55.556 0.00 0.00 0.00 5.80
3114 3134 4.215613 GGCTACATTCTTCGTCCACTTTTT 59.784 41.667 0.00 0.00 0.00 1.94
3115 3135 3.751698 GGCTACATTCTTCGTCCACTTTT 59.248 43.478 0.00 0.00 0.00 2.27
3116 3136 3.244422 TGGCTACATTCTTCGTCCACTTT 60.244 43.478 0.00 0.00 0.00 2.66
3117 3137 2.301870 TGGCTACATTCTTCGTCCACTT 59.698 45.455 0.00 0.00 0.00 3.16
3118 3138 1.899814 TGGCTACATTCTTCGTCCACT 59.100 47.619 0.00 0.00 0.00 4.00
3119 3139 2.000447 GTGGCTACATTCTTCGTCCAC 59.000 52.381 0.00 0.00 36.20 4.02
3120 3140 1.066430 GGTGGCTACATTCTTCGTCCA 60.066 52.381 1.52 0.00 0.00 4.02
3121 3141 1.066430 TGGTGGCTACATTCTTCGTCC 60.066 52.381 1.52 0.00 0.00 4.79
3122 3142 2.380084 TGGTGGCTACATTCTTCGTC 57.620 50.000 1.52 0.00 0.00 4.20
3123 3143 2.632377 CATGGTGGCTACATTCTTCGT 58.368 47.619 1.52 0.00 0.00 3.85
3124 3144 1.331756 GCATGGTGGCTACATTCTTCG 59.668 52.381 1.52 0.00 0.00 3.79
3125 3145 1.678101 GGCATGGTGGCTACATTCTTC 59.322 52.381 1.52 0.00 40.14 2.87
3126 3146 1.686115 GGGCATGGTGGCTACATTCTT 60.686 52.381 1.52 0.00 43.20 2.52
3127 3147 0.106519 GGGCATGGTGGCTACATTCT 60.107 55.000 1.52 0.00 43.20 2.40
3128 3148 0.106519 AGGGCATGGTGGCTACATTC 60.107 55.000 1.52 0.00 43.20 2.67
3129 3149 0.106519 GAGGGCATGGTGGCTACATT 60.107 55.000 1.52 0.00 43.20 2.71
3130 3150 0.990282 AGAGGGCATGGTGGCTACAT 60.990 55.000 1.52 0.00 43.20 2.29
3131 3151 1.616327 AGAGGGCATGGTGGCTACA 60.616 57.895 1.52 0.00 43.20 2.74
3132 3152 1.147153 GAGAGGGCATGGTGGCTAC 59.853 63.158 3.50 0.00 43.20 3.58
3133 3153 2.434843 CGAGAGGGCATGGTGGCTA 61.435 63.158 3.50 0.00 43.20 3.93
3134 3154 3.790437 CGAGAGGGCATGGTGGCT 61.790 66.667 3.50 0.00 43.20 4.75
3135 3155 3.329542 TTCGAGAGGGCATGGTGGC 62.330 63.158 0.00 0.00 42.88 5.01
3136 3156 1.450312 GTTCGAGAGGGCATGGTGG 60.450 63.158 0.00 0.00 0.00 4.61
3137 3157 1.811266 CGTTCGAGAGGGCATGGTG 60.811 63.158 0.00 0.00 0.00 4.17
3138 3158 1.541310 TTCGTTCGAGAGGGCATGGT 61.541 55.000 0.00 0.00 0.00 3.55
3139 3159 1.084370 GTTCGTTCGAGAGGGCATGG 61.084 60.000 0.00 0.00 0.00 3.66
3140 3160 0.389817 TGTTCGTTCGAGAGGGCATG 60.390 55.000 0.00 0.00 0.00 4.06
3141 3161 0.320374 TTGTTCGTTCGAGAGGGCAT 59.680 50.000 0.00 0.00 0.00 4.40
3142 3162 0.105224 TTTGTTCGTTCGAGAGGGCA 59.895 50.000 0.00 0.00 0.00 5.36
3143 3163 1.070108 GTTTTGTTCGTTCGAGAGGGC 60.070 52.381 0.00 0.00 0.00 5.19
3144 3164 1.191647 CGTTTTGTTCGTTCGAGAGGG 59.808 52.381 0.00 0.00 0.00 4.30
3145 3165 1.191647 CCGTTTTGTTCGTTCGAGAGG 59.808 52.381 0.00 0.00 0.00 3.69
3146 3166 2.097541 GTCCGTTTTGTTCGTTCGAGAG 60.098 50.000 0.00 0.00 0.00 3.20
3147 3167 1.854126 GTCCGTTTTGTTCGTTCGAGA 59.146 47.619 0.00 0.00 0.00 4.04
3148 3168 1.395080 CGTCCGTTTTGTTCGTTCGAG 60.395 52.381 0.00 0.00 0.00 4.04
3149 3169 0.571661 CGTCCGTTTTGTTCGTTCGA 59.428 50.000 0.00 0.00 0.00 3.71
3150 3170 0.571661 TCGTCCGTTTTGTTCGTTCG 59.428 50.000 0.00 0.00 0.00 3.95
3151 3171 2.356892 GTTCGTCCGTTTTGTTCGTTC 58.643 47.619 0.00 0.00 0.00 3.95
3152 3172 1.062440 GGTTCGTCCGTTTTGTTCGTT 59.938 47.619 0.00 0.00 0.00 3.85
3153 3173 0.652071 GGTTCGTCCGTTTTGTTCGT 59.348 50.000 0.00 0.00 0.00 3.85
3154 3174 0.651551 TGGTTCGTCCGTTTTGTTCG 59.348 50.000 0.00 0.00 39.52 3.95
3155 3175 1.003223 CCTGGTTCGTCCGTTTTGTTC 60.003 52.381 0.00 0.00 39.52 3.18
3156 3176 1.018910 CCTGGTTCGTCCGTTTTGTT 58.981 50.000 0.00 0.00 39.52 2.83
3157 3177 0.178533 TCCTGGTTCGTCCGTTTTGT 59.821 50.000 0.00 0.00 39.52 2.83
3158 3178 0.865769 CTCCTGGTTCGTCCGTTTTG 59.134 55.000 0.00 0.00 39.52 2.44
3159 3179 0.883370 GCTCCTGGTTCGTCCGTTTT 60.883 55.000 0.00 0.00 39.52 2.43
3160 3180 1.301479 GCTCCTGGTTCGTCCGTTT 60.301 57.895 0.00 0.00 39.52 3.60
3161 3181 2.342648 GCTCCTGGTTCGTCCGTT 59.657 61.111 0.00 0.00 39.52 4.44
3162 3182 4.052229 CGCTCCTGGTTCGTCCGT 62.052 66.667 0.00 0.00 39.52 4.69
3163 3183 3.685214 CTCGCTCCTGGTTCGTCCG 62.685 68.421 9.35 0.00 39.52 4.79
3164 3184 2.182030 CTCGCTCCTGGTTCGTCC 59.818 66.667 9.35 0.00 0.00 4.79
3232 3252 0.181350 GGATTGAGAAGGGCGATGGT 59.819 55.000 0.00 0.00 0.00 3.55
3242 3262 3.118261 CGAGGGAGGATTTGGATTGAGAA 60.118 47.826 0.00 0.00 0.00 2.87
3261 3281 3.304794 GGTATCGAAGGAGTTGGATCGAG 60.305 52.174 3.10 0.00 46.09 4.04
3280 3300 0.108520 GGAGTTTCGTGATGGCGGTA 60.109 55.000 0.00 0.00 0.00 4.02
3283 3303 1.361668 CCTGGAGTTTCGTGATGGCG 61.362 60.000 0.00 0.00 0.00 5.69
3293 3313 1.375326 GCTCGGAACCCTGGAGTTT 59.625 57.895 0.00 0.00 0.00 2.66
3310 3330 4.570874 GGATTGGGAGGCCGAGGC 62.571 72.222 5.37 5.37 41.06 4.70
3312 3332 2.812619 GGAGGATTGGGAGGCCGAG 61.813 68.421 0.00 0.00 0.00 4.63
3315 3335 2.696125 TGGGAGGATTGGGAGGCC 60.696 66.667 0.00 0.00 0.00 5.19
3319 3339 1.296832 TCATAGGTGGGAGGATTGGGA 59.703 52.381 0.00 0.00 0.00 4.37
3339 3359 1.066605 GCGACACCCATCTATGTACGT 59.933 52.381 0.00 0.00 0.00 3.57
3345 3365 2.421739 GCGGCGACACCCATCTAT 59.578 61.111 12.98 0.00 33.26 1.98
3405 3425 3.741476 CCGCCTTGGCTGACTTGC 61.741 66.667 10.12 0.00 0.00 4.01
3427 3447 3.827898 GGAGGAGCGACCGTGGAG 61.828 72.222 0.00 0.00 44.74 3.86
3437 3457 1.984288 ATTTACGGCTGGGGAGGAGC 61.984 60.000 0.00 0.00 35.57 4.70
3438 3458 0.106894 GATTTACGGCTGGGGAGGAG 59.893 60.000 0.00 0.00 0.00 3.69
3439 3459 1.342672 GGATTTACGGCTGGGGAGGA 61.343 60.000 0.00 0.00 0.00 3.71
3451 3471 4.957759 TTCAAGCCGCTTTAGGATTTAC 57.042 40.909 1.86 0.00 37.89 2.01
3503 3523 4.338539 ACCTCACGCACCGACGAC 62.339 66.667 0.00 0.00 36.70 4.34
3510 3530 3.349006 CACTGCCACCTCACGCAC 61.349 66.667 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.