Multiple sequence alignment - TraesCS2D01G001400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G001400 chr2D 100.000 4823 0 0 1 4823 680105 675283 0.000000e+00 8907.0
1 TraesCS2D01G001400 chr2D 88.362 232 25 2 1532 1762 648750924 648750694 1.320000e-70 278.0
2 TraesCS2D01G001400 chr2B 88.527 1534 88 37 2715 4172 10782844 10784365 0.000000e+00 1777.0
3 TraesCS2D01G001400 chr2B 85.271 1419 121 38 658 2039 10780948 10782315 0.000000e+00 1382.0
4 TraesCS2D01G001400 chr2B 91.961 510 36 2 2034 2541 10782338 10782844 0.000000e+00 710.0
5 TraesCS2D01G001400 chr2B 92.748 262 16 3 4276 4536 10784463 10784722 4.560000e-100 375.0
6 TraesCS2D01G001400 chr2B 87.097 279 11 9 4567 4823 10784724 10784999 4.720000e-75 292.0
7 TraesCS2D01G001400 chr2B 78.035 173 24 11 352 516 10780540 10780706 3.970000e-16 97.1
8 TraesCS2D01G001400 chr2A 88.194 1135 74 29 916 2039 532490 531405 0.000000e+00 1299.0
9 TraesCS2D01G001400 chr2A 87.764 899 54 10 2621 3472 530915 530026 0.000000e+00 1000.0
10 TraesCS2D01G001400 chr2A 83.500 800 53 37 4066 4823 529267 528505 0.000000e+00 673.0
11 TraesCS2D01G001400 chr2A 85.692 636 45 28 3484 4080 529916 529288 3.170000e-176 628.0
12 TraesCS2D01G001400 chr2A 86.355 513 40 7 2034 2538 531382 530892 2.560000e-147 532.0
13 TraesCS2D01G001400 chr2A 94.545 55 3 0 59 113 532930 532876 8.600000e-13 86.1
14 TraesCS2D01G001400 chr4A 93.333 120 6 2 2293 2411 661849101 661848983 4.960000e-40 176.0
15 TraesCS2D01G001400 chr7D 96.825 63 1 1 116 177 75982630 75982568 2.370000e-18 104.0
16 TraesCS2D01G001400 chr7D 98.214 56 1 0 116 171 607103147 607103092 1.100000e-16 99.0
17 TraesCS2D01G001400 chr3B 96.721 61 1 1 112 171 219473244 219473304 3.070000e-17 100.0
18 TraesCS2D01G001400 chr3B 100.000 54 0 0 118 171 220784860 220784913 3.070000e-17 100.0
19 TraesCS2D01G001400 chr3B 96.552 58 0 2 116 171 219474666 219474609 1.430000e-15 95.3
20 TraesCS2D01G001400 chr5B 100.000 53 0 0 119 171 599649188 599649136 1.100000e-16 99.0
21 TraesCS2D01G001400 chr1A 100.000 53 0 0 119 171 403147164 403147112 1.100000e-16 99.0
22 TraesCS2D01G001400 chr1B 98.214 56 0 1 117 171 410332232 410332177 3.970000e-16 97.1
23 TraesCS2D01G001400 chr6D 96.491 57 1 1 116 171 453175704 453175648 5.140000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G001400 chr2D 675283 680105 4822 True 8907.000000 8907 100.000000 1 4823 1 chr2D.!!$R1 4822
1 TraesCS2D01G001400 chr2B 10780540 10784999 4459 False 772.183333 1777 87.273167 352 4823 6 chr2B.!!$F1 4471
2 TraesCS2D01G001400 chr2A 528505 532930 4425 True 703.016667 1299 87.675000 59 4823 6 chr2A.!!$R1 4764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.101939 GTAAGGTAAGCCCTCGGTCG 59.898 60.0 0.00 0.00 45.47 4.79 F
50 51 0.105913 GTCGATCCCCCTCTTCTCCT 60.106 60.0 0.00 0.00 0.00 3.69 F
1809 2119 0.036010 GTGCAGCCTAGCTCTTTCCA 60.036 55.0 0.00 0.00 36.40 3.53 F
1887 2198 0.110644 GTTGCTTACTCTGTGCGCAC 60.111 55.0 33.11 33.11 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 2100 0.036010 TGGAAAGAGCTAGGCTGCAC 60.036 55.000 0.5 0.00 39.88 4.57 R
1875 2186 0.742281 GATGATGGTGCGCACAGAGT 60.742 55.000 38.6 22.12 0.00 3.24 R
2614 2969 1.060698 GTGCTCGAAGGAACATTACGC 59.939 52.381 0.0 0.00 0.00 4.42 R
3834 4402 1.151587 ACCACCAGTCCAGGGGATT 60.152 57.895 0.0 0.00 32.15 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.101939 GTAAGGTAAGCCCTCGGTCG 59.898 60.000 0.00 0.00 45.47 4.79
20 21 1.039233 TAAGGTAAGCCCTCGGTCGG 61.039 60.000 0.00 0.00 45.47 4.79
22 23 3.073101 GTAAGCCCTCGGTCGGGT 61.073 66.667 7.11 0.00 46.47 5.28
23 24 2.757099 TAAGCCCTCGGTCGGGTC 60.757 66.667 7.11 1.13 46.47 4.46
37 38 3.897320 GGTCGGGTCGGGTCGATC 61.897 72.222 0.00 0.00 38.42 3.69
47 48 4.709690 GGTCGATCCCCCTCTTCT 57.290 61.111 0.00 0.00 0.00 2.85
48 49 2.432119 GGTCGATCCCCCTCTTCTC 58.568 63.158 0.00 0.00 0.00 2.87
49 50 1.116536 GGTCGATCCCCCTCTTCTCC 61.117 65.000 0.00 0.00 0.00 3.71
50 51 0.105913 GTCGATCCCCCTCTTCTCCT 60.106 60.000 0.00 0.00 0.00 3.69
51 52 0.637195 TCGATCCCCCTCTTCTCCTT 59.363 55.000 0.00 0.00 0.00 3.36
52 53 1.044611 CGATCCCCCTCTTCTCCTTC 58.955 60.000 0.00 0.00 0.00 3.46
53 54 1.412361 CGATCCCCCTCTTCTCCTTCT 60.412 57.143 0.00 0.00 0.00 2.85
54 55 2.325484 GATCCCCCTCTTCTCCTTCTC 58.675 57.143 0.00 0.00 0.00 2.87
55 56 0.340208 TCCCCCTCTTCTCCTTCTCC 59.660 60.000 0.00 0.00 0.00 3.71
56 57 0.341609 CCCCCTCTTCTCCTTCTCCT 59.658 60.000 0.00 0.00 0.00 3.69
57 58 1.274126 CCCCCTCTTCTCCTTCTCCTT 60.274 57.143 0.00 0.00 0.00 3.36
62 63 3.309848 CCTCTTCTCCTTCTCCTTCTCCT 60.310 52.174 0.00 0.00 0.00 3.69
64 65 4.093011 TCTTCTCCTTCTCCTTCTCCTTG 58.907 47.826 0.00 0.00 0.00 3.61
77 78 2.813907 TCTCCTTGTCCTTCTCCTCTG 58.186 52.381 0.00 0.00 0.00 3.35
113 114 1.302033 GCCGCGGATGGATCTGATT 60.302 57.895 33.48 0.00 35.13 2.57
115 116 0.319728 CCGCGGATGGATCTGATTCT 59.680 55.000 24.07 0.00 35.13 2.40
116 117 1.270518 CCGCGGATGGATCTGATTCTT 60.271 52.381 24.07 0.00 35.13 2.52
117 118 2.487934 CGCGGATGGATCTGATTCTTT 58.512 47.619 0.00 0.00 35.13 2.52
118 119 2.874701 CGCGGATGGATCTGATTCTTTT 59.125 45.455 0.00 0.00 35.13 2.27
119 120 3.313526 CGCGGATGGATCTGATTCTTTTT 59.686 43.478 0.00 0.00 35.13 1.94
145 146 5.927954 TTTTGAAAGATCCAGCAAAATGC 57.072 34.783 11.08 0.00 45.46 3.56
157 158 1.657094 GCAAAATGCTGGCTTGATTCG 59.343 47.619 0.00 0.00 40.96 3.34
158 159 2.671914 GCAAAATGCTGGCTTGATTCGA 60.672 45.455 0.00 0.00 40.96 3.71
159 160 3.777478 CAAAATGCTGGCTTGATTCGAT 58.223 40.909 0.00 0.00 0.00 3.59
160 161 4.178540 CAAAATGCTGGCTTGATTCGATT 58.821 39.130 0.00 0.00 0.00 3.34
161 162 4.460948 AAATGCTGGCTTGATTCGATTT 57.539 36.364 0.00 0.00 0.00 2.17
162 163 5.581126 AAATGCTGGCTTGATTCGATTTA 57.419 34.783 0.00 0.00 0.00 1.40
163 164 4.825546 ATGCTGGCTTGATTCGATTTAG 57.174 40.909 0.00 0.00 0.00 1.85
164 165 2.355756 TGCTGGCTTGATTCGATTTAGC 59.644 45.455 0.00 0.00 0.00 3.09
165 166 2.355756 GCTGGCTTGATTCGATTTAGCA 59.644 45.455 13.69 0.00 33.60 3.49
166 167 3.547613 GCTGGCTTGATTCGATTTAGCAG 60.548 47.826 13.69 10.87 33.60 4.24
167 168 2.945008 TGGCTTGATTCGATTTAGCAGG 59.055 45.455 13.69 0.00 33.60 4.85
168 169 3.206150 GGCTTGATTCGATTTAGCAGGA 58.794 45.455 13.69 0.00 33.60 3.86
169 170 3.627577 GGCTTGATTCGATTTAGCAGGAA 59.372 43.478 13.69 0.00 33.60 3.36
170 171 4.260948 GGCTTGATTCGATTTAGCAGGAAG 60.261 45.833 13.69 0.00 33.60 3.46
171 172 4.260948 GCTTGATTCGATTTAGCAGGAAGG 60.261 45.833 9.25 0.00 0.00 3.46
172 173 4.753516 TGATTCGATTTAGCAGGAAGGA 57.246 40.909 0.00 0.00 0.00 3.36
173 174 5.296151 TGATTCGATTTAGCAGGAAGGAT 57.704 39.130 0.00 0.00 0.00 3.24
174 175 5.059161 TGATTCGATTTAGCAGGAAGGATG 58.941 41.667 0.00 0.00 0.00 3.51
175 176 3.475566 TCGATTTAGCAGGAAGGATGG 57.524 47.619 0.00 0.00 0.00 3.51
176 177 3.038280 TCGATTTAGCAGGAAGGATGGA 58.962 45.455 0.00 0.00 0.00 3.41
177 178 3.648067 TCGATTTAGCAGGAAGGATGGAT 59.352 43.478 0.00 0.00 0.00 3.41
178 179 3.999663 CGATTTAGCAGGAAGGATGGATC 59.000 47.826 0.00 0.00 0.00 3.36
179 180 4.262808 CGATTTAGCAGGAAGGATGGATCT 60.263 45.833 0.00 0.00 0.00 2.75
180 181 4.428294 TTTAGCAGGAAGGATGGATCTG 57.572 45.455 0.00 0.00 0.00 2.90
181 182 2.187239 AGCAGGAAGGATGGATCTGA 57.813 50.000 0.00 0.00 0.00 3.27
182 183 2.703947 AGCAGGAAGGATGGATCTGAT 58.296 47.619 0.00 0.00 0.00 2.90
183 184 3.054576 AGCAGGAAGGATGGATCTGATT 58.945 45.455 0.00 0.00 0.00 2.57
184 185 3.072768 AGCAGGAAGGATGGATCTGATTC 59.927 47.826 0.00 0.00 0.00 2.52
185 186 3.072768 GCAGGAAGGATGGATCTGATTCT 59.927 47.826 0.00 0.00 0.00 2.40
186 187 4.643463 CAGGAAGGATGGATCTGATTCTG 58.357 47.826 0.00 0.00 0.00 3.02
187 188 4.347292 CAGGAAGGATGGATCTGATTCTGA 59.653 45.833 0.00 0.00 0.00 3.27
188 189 5.013287 CAGGAAGGATGGATCTGATTCTGAT 59.987 44.000 5.81 5.81 0.00 2.90
189 190 5.248934 AGGAAGGATGGATCTGATTCTGATC 59.751 44.000 19.77 19.77 37.85 2.92
195 196 3.766068 GATCTGATTCTGATCCAGCCA 57.234 47.619 18.07 0.00 34.30 4.75
196 197 3.666274 GATCTGATTCTGATCCAGCCAG 58.334 50.000 18.07 0.00 34.30 4.85
197 198 1.140452 TCTGATTCTGATCCAGCCAGC 59.860 52.381 0.00 0.00 0.00 4.85
198 199 1.141254 CTGATTCTGATCCAGCCAGCT 59.859 52.381 0.00 0.00 0.00 4.24
199 200 1.140452 TGATTCTGATCCAGCCAGCTC 59.860 52.381 0.00 0.00 0.00 4.09
200 201 0.473326 ATTCTGATCCAGCCAGCTCC 59.527 55.000 0.00 0.00 0.00 4.70
201 202 0.911045 TTCTGATCCAGCCAGCTCCA 60.911 55.000 0.00 0.00 0.00 3.86
202 203 1.146485 CTGATCCAGCCAGCTCCAG 59.854 63.158 0.00 0.00 0.00 3.86
203 204 2.326773 CTGATCCAGCCAGCTCCAGG 62.327 65.000 0.00 0.00 0.00 4.45
204 205 2.285969 ATCCAGCCAGCTCCAGGT 60.286 61.111 0.00 0.00 0.00 4.00
205 206 2.322638 GATCCAGCCAGCTCCAGGTC 62.323 65.000 0.00 0.00 0.00 3.85
206 207 2.836672 ATCCAGCCAGCTCCAGGTCT 62.837 60.000 0.00 0.00 0.00 3.85
207 208 2.583520 CAGCCAGCTCCAGGTCTC 59.416 66.667 0.00 0.00 0.00 3.36
208 209 2.686835 AGCCAGCTCCAGGTCTCC 60.687 66.667 0.00 0.00 0.00 3.71
209 210 2.686835 GCCAGCTCCAGGTCTCCT 60.687 66.667 0.00 0.00 0.00 3.69
210 211 2.297129 GCCAGCTCCAGGTCTCCTT 61.297 63.158 0.00 0.00 0.00 3.36
211 212 1.904032 CCAGCTCCAGGTCTCCTTC 59.096 63.158 0.00 0.00 0.00 3.46
212 213 1.621672 CCAGCTCCAGGTCTCCTTCC 61.622 65.000 0.00 0.00 0.00 3.46
213 214 0.617249 CAGCTCCAGGTCTCCTTCCT 60.617 60.000 0.00 0.00 35.45 3.36
214 215 0.118144 AGCTCCAGGTCTCCTTCCTT 59.882 55.000 0.00 0.00 32.37 3.36
233 234 3.055021 CCTTCCTTCCTTCCTTGTACTCC 60.055 52.174 0.00 0.00 0.00 3.85
260 314 2.925966 ATGGTTTGGTGGATGGATGT 57.074 45.000 0.00 0.00 0.00 3.06
261 315 1.921982 TGGTTTGGTGGATGGATGTG 58.078 50.000 0.00 0.00 0.00 3.21
262 316 0.532115 GGTTTGGTGGATGGATGTGC 59.468 55.000 0.00 0.00 0.00 4.57
263 317 1.549203 GTTTGGTGGATGGATGTGCT 58.451 50.000 0.00 0.00 0.00 4.40
264 318 1.474077 GTTTGGTGGATGGATGTGCTC 59.526 52.381 0.00 0.00 0.00 4.26
265 319 0.994247 TTGGTGGATGGATGTGCTCT 59.006 50.000 0.00 0.00 0.00 4.09
266 320 1.878211 TGGTGGATGGATGTGCTCTA 58.122 50.000 0.00 0.00 0.00 2.43
267 321 2.411583 TGGTGGATGGATGTGCTCTAT 58.588 47.619 0.00 0.00 0.00 1.98
268 322 2.105306 TGGTGGATGGATGTGCTCTATG 59.895 50.000 0.00 0.00 0.00 2.23
269 323 2.369860 GGTGGATGGATGTGCTCTATGA 59.630 50.000 0.00 0.00 0.00 2.15
270 324 3.556633 GGTGGATGGATGTGCTCTATGAG 60.557 52.174 0.00 0.00 0.00 2.90
271 325 2.636403 TGGATGGATGTGCTCTATGAGG 59.364 50.000 0.00 0.00 0.00 3.86
272 326 2.636893 GGATGGATGTGCTCTATGAGGT 59.363 50.000 0.00 0.00 0.00 3.85
273 327 3.306641 GGATGGATGTGCTCTATGAGGTC 60.307 52.174 0.00 0.00 0.00 3.85
274 328 2.042464 TGGATGTGCTCTATGAGGTCC 58.958 52.381 0.00 0.00 0.00 4.46
275 329 1.346068 GGATGTGCTCTATGAGGTCCC 59.654 57.143 0.00 0.00 0.00 4.46
277 331 0.324368 TGTGCTCTATGAGGTCCCGT 60.324 55.000 0.00 0.00 0.00 5.28
278 332 0.386113 GTGCTCTATGAGGTCCCGTC 59.614 60.000 0.00 0.00 0.00 4.79
279 333 0.755698 TGCTCTATGAGGTCCCGTCC 60.756 60.000 0.00 0.00 0.00 4.79
280 334 1.797211 GCTCTATGAGGTCCCGTCCG 61.797 65.000 0.00 0.00 0.00 4.79
281 335 0.465824 CTCTATGAGGTCCCGTCCGT 60.466 60.000 0.00 0.00 0.00 4.69
282 336 0.465097 TCTATGAGGTCCCGTCCGTC 60.465 60.000 0.00 0.00 0.00 4.79
283 337 1.783031 CTATGAGGTCCCGTCCGTCG 61.783 65.000 0.00 0.00 39.52 5.12
298 352 1.136147 GTCGCCTTGCTGCTGATTG 59.864 57.895 0.00 0.00 0.00 2.67
299 353 1.003476 TCGCCTTGCTGCTGATTGA 60.003 52.632 0.00 0.00 0.00 2.57
300 354 0.606130 TCGCCTTGCTGCTGATTGAA 60.606 50.000 0.00 0.00 0.00 2.69
301 355 0.455633 CGCCTTGCTGCTGATTGAAC 60.456 55.000 0.00 0.00 0.00 3.18
302 356 0.108945 GCCTTGCTGCTGATTGAACC 60.109 55.000 0.00 0.00 0.00 3.62
303 357 1.250328 CCTTGCTGCTGATTGAACCA 58.750 50.000 0.00 0.00 0.00 3.67
304 358 1.614903 CCTTGCTGCTGATTGAACCAA 59.385 47.619 0.00 0.00 0.00 3.67
305 359 2.608752 CCTTGCTGCTGATTGAACCAAC 60.609 50.000 0.00 0.00 0.00 3.77
306 360 0.961019 TGCTGCTGATTGAACCAACC 59.039 50.000 0.00 0.00 0.00 3.77
307 361 0.961019 GCTGCTGATTGAACCAACCA 59.039 50.000 0.00 0.00 0.00 3.67
308 362 1.547372 GCTGCTGATTGAACCAACCAT 59.453 47.619 0.00 0.00 0.00 3.55
309 363 2.673043 GCTGCTGATTGAACCAACCATG 60.673 50.000 0.00 0.00 0.00 3.66
310 364 1.273048 TGCTGATTGAACCAACCATGC 59.727 47.619 0.00 0.00 0.00 4.06
311 365 1.547372 GCTGATTGAACCAACCATGCT 59.453 47.619 0.00 0.00 0.00 3.79
312 366 2.754552 GCTGATTGAACCAACCATGCTA 59.245 45.455 0.00 0.00 0.00 3.49
313 367 3.382546 GCTGATTGAACCAACCATGCTAT 59.617 43.478 0.00 0.00 0.00 2.97
314 368 4.580167 GCTGATTGAACCAACCATGCTATA 59.420 41.667 0.00 0.00 0.00 1.31
315 369 5.506317 GCTGATTGAACCAACCATGCTATAC 60.506 44.000 0.00 0.00 0.00 1.47
316 370 5.754782 TGATTGAACCAACCATGCTATACT 58.245 37.500 0.00 0.00 0.00 2.12
317 371 6.894682 TGATTGAACCAACCATGCTATACTA 58.105 36.000 0.00 0.00 0.00 1.82
318 372 7.517320 TGATTGAACCAACCATGCTATACTAT 58.483 34.615 0.00 0.00 0.00 2.12
319 373 7.445096 TGATTGAACCAACCATGCTATACTATG 59.555 37.037 0.00 0.00 0.00 2.23
320 374 5.063204 TGAACCAACCATGCTATACTATGC 58.937 41.667 0.00 0.00 0.00 3.14
321 375 4.982241 ACCAACCATGCTATACTATGCT 57.018 40.909 0.00 0.00 0.00 3.79
322 376 6.042666 TGAACCAACCATGCTATACTATGCTA 59.957 38.462 0.00 0.00 0.00 3.49
323 377 6.627087 ACCAACCATGCTATACTATGCTAT 57.373 37.500 0.00 0.00 0.00 2.97
324 378 6.644347 ACCAACCATGCTATACTATGCTATC 58.356 40.000 0.00 0.00 0.00 2.08
325 379 6.051717 CCAACCATGCTATACTATGCTATCC 58.948 44.000 0.00 0.00 0.00 2.59
326 380 6.126940 CCAACCATGCTATACTATGCTATCCT 60.127 42.308 0.00 0.00 0.00 3.24
327 381 7.069950 CCAACCATGCTATACTATGCTATCCTA 59.930 40.741 0.00 0.00 0.00 2.94
328 382 8.646004 CAACCATGCTATACTATGCTATCCTAT 58.354 37.037 0.00 0.00 0.00 2.57
329 383 8.415950 ACCATGCTATACTATGCTATCCTATC 57.584 38.462 0.00 0.00 0.00 2.08
330 384 7.453126 ACCATGCTATACTATGCTATCCTATCC 59.547 40.741 0.00 0.00 0.00 2.59
331 385 7.673504 CCATGCTATACTATGCTATCCTATCCT 59.326 40.741 0.00 0.00 0.00 3.24
332 386 9.746457 CATGCTATACTATGCTATCCTATCCTA 57.254 37.037 0.00 0.00 0.00 2.94
334 388 9.967451 TGCTATACTATGCTATCCTATCCTATC 57.033 37.037 0.00 0.00 0.00 2.08
335 389 9.403583 GCTATACTATGCTATCCTATCCTATCC 57.596 40.741 0.00 0.00 0.00 2.59
340 394 8.620177 ACTATGCTATCCTATCCTATCCTATCC 58.380 40.741 0.00 0.00 0.00 2.59
341 395 7.677435 ATGCTATCCTATCCTATCCTATCCT 57.323 40.000 0.00 0.00 0.00 3.24
342 396 8.780377 ATGCTATCCTATCCTATCCTATCCTA 57.220 38.462 0.00 0.00 0.00 2.94
343 397 8.780377 TGCTATCCTATCCTATCCTATCCTAT 57.220 38.462 0.00 0.00 0.00 2.57
344 398 8.841757 TGCTATCCTATCCTATCCTATCCTATC 58.158 40.741 0.00 0.00 0.00 2.08
345 399 8.279361 GCTATCCTATCCTATCCTATCCTATCC 58.721 44.444 0.00 0.00 0.00 2.59
346 400 9.357921 CTATCCTATCCTATCCTATCCTATCCA 57.642 40.741 0.00 0.00 0.00 3.41
347 401 8.802238 ATCCTATCCTATCCTATCCTATCCAT 57.198 38.462 0.00 0.00 0.00 3.41
348 402 8.005831 TCCTATCCTATCCTATCCTATCCATG 57.994 42.308 0.00 0.00 0.00 3.66
349 403 7.020066 TCCTATCCTATCCTATCCTATCCATGG 59.980 44.444 4.97 4.97 0.00 3.66
350 404 6.636341 ATCCTATCCTATCCTATCCATGGT 57.364 41.667 12.58 1.59 0.00 3.55
360 414 4.806892 TCCTATCCATGGTTGATGCAATT 58.193 39.130 12.58 0.00 0.00 2.32
390 444 7.330262 TGTGCCATTCTTTCTTTCTTTCTTTT 58.670 30.769 0.00 0.00 0.00 2.27
391 445 7.492344 TGTGCCATTCTTTCTTTCTTTCTTTTC 59.508 33.333 0.00 0.00 0.00 2.29
393 447 7.922811 TGCCATTCTTTCTTTCTTTCTTTTCTC 59.077 33.333 0.00 0.00 0.00 2.87
394 448 7.383572 GCCATTCTTTCTTTCTTTCTTTTCTCC 59.616 37.037 0.00 0.00 0.00 3.71
395 449 8.637099 CCATTCTTTCTTTCTTTCTTTTCTCCT 58.363 33.333 0.00 0.00 0.00 3.69
396 450 9.676195 CATTCTTTCTTTCTTTCTTTTCTCCTC 57.324 33.333 0.00 0.00 0.00 3.71
408 462 1.595058 TTCTCCTCCCTCCCTCCCTC 61.595 65.000 0.00 0.00 0.00 4.30
409 463 3.036959 TCCTCCCTCCCTCCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
410 464 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
417 471 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
418 472 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
420 474 3.368501 TCCCTCCCTCCCTCCCTG 61.369 72.222 0.00 0.00 0.00 4.45
425 479 0.688087 CTCCCTCCCTCCCTGTGTAC 60.688 65.000 0.00 0.00 0.00 2.90
437 491 6.181908 CCTCCCTGTGTACCTATCTATCTAC 58.818 48.000 0.00 0.00 0.00 2.59
438 492 6.012333 CCTCCCTGTGTACCTATCTATCTACT 60.012 46.154 0.00 0.00 0.00 2.57
439 493 7.018487 TCCCTGTGTACCTATCTATCTACTC 57.982 44.000 0.00 0.00 0.00 2.59
449 518 8.024145 ACCTATCTATCTACTCTTTGGTTTGG 57.976 38.462 0.00 0.00 0.00 3.28
451 520 8.145122 CCTATCTATCTACTCTTTGGTTTGGTC 58.855 40.741 0.00 0.00 0.00 4.02
459 528 3.808728 TCTTTGGTTTGGTCAGAGTCAG 58.191 45.455 0.00 0.00 0.00 3.51
461 530 4.103153 TCTTTGGTTTGGTCAGAGTCAGAT 59.897 41.667 0.00 0.00 0.00 2.90
465 534 4.080919 TGGTTTGGTCAGAGTCAGATATGG 60.081 45.833 0.00 0.00 0.00 2.74
467 536 5.491982 GTTTGGTCAGAGTCAGATATGGTT 58.508 41.667 0.00 0.00 0.00 3.67
468 537 5.762179 TTGGTCAGAGTCAGATATGGTTT 57.238 39.130 0.00 0.00 0.00 3.27
469 538 5.089970 TGGTCAGAGTCAGATATGGTTTG 57.910 43.478 0.00 0.00 0.00 2.93
470 539 4.532126 TGGTCAGAGTCAGATATGGTTTGT 59.468 41.667 0.00 0.00 0.00 2.83
471 540 5.013079 TGGTCAGAGTCAGATATGGTTTGTT 59.987 40.000 0.00 0.00 0.00 2.83
472 541 5.940470 GGTCAGAGTCAGATATGGTTTGTTT 59.060 40.000 0.00 0.00 0.00 2.83
473 542 6.128172 GGTCAGAGTCAGATATGGTTTGTTTG 60.128 42.308 0.00 0.00 0.00 2.93
474 543 6.650807 GTCAGAGTCAGATATGGTTTGTTTGA 59.349 38.462 0.00 0.00 0.00 2.69
475 544 7.335422 GTCAGAGTCAGATATGGTTTGTTTGAT 59.665 37.037 0.00 0.00 0.00 2.57
476 545 7.335171 TCAGAGTCAGATATGGTTTGTTTGATG 59.665 37.037 0.00 0.00 0.00 3.07
477 546 7.335171 CAGAGTCAGATATGGTTTGTTTGATGA 59.665 37.037 0.00 0.00 0.00 2.92
478 547 7.551974 AGAGTCAGATATGGTTTGTTTGATGAG 59.448 37.037 0.00 0.00 0.00 2.90
479 548 6.600822 AGTCAGATATGGTTTGTTTGATGAGG 59.399 38.462 0.00 0.00 0.00 3.86
480 549 5.887598 TCAGATATGGTTTGTTTGATGAGGG 59.112 40.000 0.00 0.00 0.00 4.30
503 572 2.514160 AGGGGAGGGGATTCATACAAAC 59.486 50.000 0.00 0.00 0.00 2.93
507 576 4.658901 GGGAGGGGATTCATACAAACTCTA 59.341 45.833 0.00 0.00 0.00 2.43
508 577 5.221742 GGGAGGGGATTCATACAAACTCTAG 60.222 48.000 0.00 0.00 0.00 2.43
509 578 5.367060 GGAGGGGATTCATACAAACTCTAGT 59.633 44.000 0.00 0.00 0.00 2.57
510 579 6.463190 GGAGGGGATTCATACAAACTCTAGTC 60.463 46.154 0.00 0.00 0.00 2.59
511 580 6.206042 AGGGGATTCATACAAACTCTAGTCT 58.794 40.000 0.00 0.00 0.00 3.24
517 586 9.548208 GATTCATACAAACTCTAGTCTTTTTGC 57.452 33.333 0.00 0.00 33.13 3.68
518 587 8.677148 TTCATACAAACTCTAGTCTTTTTGCT 57.323 30.769 0.00 0.00 33.13 3.91
519 588 8.677148 TCATACAAACTCTAGTCTTTTTGCTT 57.323 30.769 0.00 0.00 33.13 3.91
520 589 8.774586 TCATACAAACTCTAGTCTTTTTGCTTC 58.225 33.333 0.00 0.00 33.13 3.86
522 591 7.631717 ACAAACTCTAGTCTTTTTGCTTCTT 57.368 32.000 0.00 0.00 33.13 2.52
525 594 6.869315 ACTCTAGTCTTTTTGCTTCTTTCC 57.131 37.500 0.00 0.00 0.00 3.13
526 595 5.765677 ACTCTAGTCTTTTTGCTTCTTTCCC 59.234 40.000 0.00 0.00 0.00 3.97
528 597 4.926140 AGTCTTTTTGCTTCTTTCCCTG 57.074 40.909 0.00 0.00 0.00 4.45
530 599 4.711846 AGTCTTTTTGCTTCTTTCCCTGTT 59.288 37.500 0.00 0.00 0.00 3.16
532 601 5.520288 GTCTTTTTGCTTCTTTCCCTGTTTC 59.480 40.000 0.00 0.00 0.00 2.78
534 603 5.675684 TTTTGCTTCTTTCCCTGTTTCTT 57.324 34.783 0.00 0.00 0.00 2.52
535 604 4.654091 TTGCTTCTTTCCCTGTTTCTTG 57.346 40.909 0.00 0.00 0.00 3.02
537 606 3.885297 TGCTTCTTTCCCTGTTTCTTGAG 59.115 43.478 0.00 0.00 0.00 3.02
538 607 4.137543 GCTTCTTTCCCTGTTTCTTGAGA 58.862 43.478 0.00 0.00 0.00 3.27
539 608 4.215185 GCTTCTTTCCCTGTTTCTTGAGAG 59.785 45.833 0.00 0.00 0.00 3.20
540 609 5.615289 CTTCTTTCCCTGTTTCTTGAGAGA 58.385 41.667 0.00 0.00 0.00 3.10
541 610 5.832539 TCTTTCCCTGTTTCTTGAGAGAT 57.167 39.130 0.00 0.00 0.00 2.75
542 611 5.799213 TCTTTCCCTGTTTCTTGAGAGATC 58.201 41.667 0.00 0.00 0.00 2.75
543 612 5.545723 TCTTTCCCTGTTTCTTGAGAGATCT 59.454 40.000 0.00 0.00 0.00 2.75
545 614 4.682563 TCCCTGTTTCTTGAGAGATCTCT 58.317 43.478 25.39 25.39 43.25 3.10
564 675 6.788598 TCTCTCTCTCTGTTTGCTTGATAT 57.211 37.500 0.00 0.00 0.00 1.63
569 680 9.973450 TCTCTCTCTGTTTGCTTGATATAATAC 57.027 33.333 0.00 0.00 0.00 1.89
570 681 9.755804 CTCTCTCTGTTTGCTTGATATAATACA 57.244 33.333 0.00 0.00 0.00 2.29
602 713 5.632118 ACTCCCTACTTTCCCTTTTCTTTC 58.368 41.667 0.00 0.00 0.00 2.62
603 714 5.133830 ACTCCCTACTTTCCCTTTTCTTTCA 59.866 40.000 0.00 0.00 0.00 2.69
607 718 5.478332 CCTACTTTCCCTTTTCTTTCATGCT 59.522 40.000 0.00 0.00 0.00 3.79
609 720 5.847304 ACTTTCCCTTTTCTTTCATGCTTC 58.153 37.500 0.00 0.00 0.00 3.86
610 721 5.600069 ACTTTCCCTTTTCTTTCATGCTTCT 59.400 36.000 0.00 0.00 0.00 2.85
611 722 5.458041 TTCCCTTTTCTTTCATGCTTCTG 57.542 39.130 0.00 0.00 0.00 3.02
613 724 3.257624 CCCTTTTCTTTCATGCTTCTGCT 59.742 43.478 0.00 0.00 40.48 4.24
619 746 2.195741 TTCATGCTTCTGCTTCTGCT 57.804 45.000 0.00 0.00 40.48 4.24
640 767 1.206610 TCTGCTTGCCTGTCTCTCATC 59.793 52.381 0.00 0.00 0.00 2.92
647 774 4.727507 TGCCTGTCTCTCATCTTTACTC 57.272 45.455 0.00 0.00 0.00 2.59
655 782 7.487484 TGTCTCTCATCTTTACTCACATGATC 58.513 38.462 0.00 0.00 0.00 2.92
691 869 0.463295 CTGCTCTGCTACCACCCATG 60.463 60.000 0.00 0.00 0.00 3.66
696 874 2.947652 CTCTGCTACCACCCATGAAATG 59.052 50.000 0.00 0.00 46.21 2.32
716 894 9.017509 TGAAATGAAATTGCTCTTCTCTGTAAT 57.982 29.630 0.00 0.00 36.10 1.89
743 921 8.966069 ATATGATGATGATATTGCTCTTCCTG 57.034 34.615 0.00 0.00 0.00 3.86
744 922 6.183810 TGATGATGATATTGCTCTTCCTGT 57.816 37.500 0.00 0.00 0.00 4.00
756 950 8.627208 ATTGCTCTTCCTGTATTTATGTATGG 57.373 34.615 0.00 0.00 0.00 2.74
763 957 7.062749 TCCTGTATTTATGTATGGTCACTCC 57.937 40.000 0.00 0.00 0.00 3.85
764 958 6.844388 TCCTGTATTTATGTATGGTCACTCCT 59.156 38.462 0.00 0.00 37.07 3.69
765 959 7.015292 TCCTGTATTTATGTATGGTCACTCCTC 59.985 40.741 0.00 0.00 37.07 3.71
766 960 7.015682 CCTGTATTTATGTATGGTCACTCCTCT 59.984 40.741 0.00 0.00 37.07 3.69
767 961 8.319057 TGTATTTATGTATGGTCACTCCTCTT 57.681 34.615 0.00 0.00 37.07 2.85
768 962 8.421784 TGTATTTATGTATGGTCACTCCTCTTC 58.578 37.037 0.00 0.00 37.07 2.87
769 963 5.871396 TTATGTATGGTCACTCCTCTTCC 57.129 43.478 0.00 0.00 37.07 3.46
778 972 1.339610 CACTCCTCTTCCTCATAGCCG 59.660 57.143 0.00 0.00 0.00 5.52
783 977 1.751351 CTCTTCCTCATAGCCGTGTCA 59.249 52.381 0.00 0.00 0.00 3.58
804 1002 9.614792 GTGTCATACCCTCTAATTAAATCACTT 57.385 33.333 0.00 0.00 0.00 3.16
812 1010 9.032420 CCCTCTAATTAAATCACTTTAGTCGAC 57.968 37.037 7.70 7.70 0.00 4.20
820 1018 4.430137 TCACTTTAGTCGACGCAATAGT 57.570 40.909 10.46 7.83 0.00 2.12
821 1019 4.801891 TCACTTTAGTCGACGCAATAGTT 58.198 39.130 10.46 0.00 0.00 2.24
839 1041 7.533426 CAATAGTTATGCTTTCTTTCACTGCT 58.467 34.615 0.00 0.00 0.00 4.24
840 1042 7.693969 ATAGTTATGCTTTCTTTCACTGCTT 57.306 32.000 0.00 0.00 0.00 3.91
872 1078 1.000396 GGGCAGGGCTTGATTCACT 60.000 57.895 0.00 0.00 0.00 3.41
873 1079 0.613012 GGGCAGGGCTTGATTCACTT 60.613 55.000 0.00 0.00 0.00 3.16
874 1080 0.813821 GGCAGGGCTTGATTCACTTC 59.186 55.000 0.00 0.00 0.00 3.01
875 1081 1.538047 GCAGGGCTTGATTCACTTCA 58.462 50.000 0.00 0.00 0.00 3.02
876 1082 1.200948 GCAGGGCTTGATTCACTTCAC 59.799 52.381 0.00 0.00 0.00 3.18
883 1089 4.081087 GGCTTGATTCACTTCACCCTACTA 60.081 45.833 0.00 0.00 0.00 1.82
890 1096 1.827969 ACTTCACCCTACTAGCTGCTG 59.172 52.381 13.43 4.99 0.00 4.41
892 1098 1.186200 TCACCCTACTAGCTGCTGTG 58.814 55.000 13.43 10.63 0.00 3.66
894 1100 0.898320 ACCCTACTAGCTGCTGTGTG 59.102 55.000 13.43 2.49 0.00 3.82
906 1112 0.239347 GCTGTGTGATGCAACTGACC 59.761 55.000 0.00 0.00 0.00 4.02
911 1117 0.792640 GTGATGCAACTGACCGACTG 59.207 55.000 0.00 0.00 0.00 3.51
921 1212 4.175787 ACTGACCGACTGTCTTATGTTC 57.824 45.455 6.21 0.00 44.75 3.18
931 1222 5.494724 ACTGTCTTATGTTCATGTGATGCT 58.505 37.500 0.00 0.00 0.00 3.79
934 1225 5.706833 TGTCTTATGTTCATGTGATGCTGTT 59.293 36.000 0.00 0.00 0.00 3.16
980 1271 3.483959 GAAGCCGCTCTTCTGCAG 58.516 61.111 7.63 7.63 45.99 4.41
998 1289 2.941415 GCAGATAACCAGGTTCTGTGGG 60.941 54.545 18.79 4.33 39.65 4.61
1020 1311 3.320626 CATGTCTGACAGCGAGAAAGAA 58.679 45.455 16.46 0.00 0.00 2.52
1032 1323 2.421619 GAGAAAGAAGTGCCAGTGGAG 58.578 52.381 15.20 0.00 0.00 3.86
1035 1326 0.398318 AAGAAGTGCCAGTGGAGGTC 59.602 55.000 15.20 3.86 0.00 3.85
1080 1374 2.734591 GAGGTGGTCACGCTCACA 59.265 61.111 11.82 0.00 35.74 3.58
1083 1377 3.044305 GTGGTCACGCTCACAGCC 61.044 66.667 0.00 0.00 38.18 4.85
1121 1415 2.581354 CAGCGGACCAGAAGGAGG 59.419 66.667 0.00 0.00 38.69 4.30
1293 1590 2.019984 GAAGATGCCGGCTTCAAGAAT 58.980 47.619 35.52 17.89 41.03 2.40
1296 1593 1.474077 GATGCCGGCTTCAAGAATGTT 59.526 47.619 31.35 0.00 0.00 2.71
1326 1623 0.395862 ACGATGATGGGTCCGAGACT 60.396 55.000 0.00 0.00 32.47 3.24
1364 1661 2.280823 GGGAAGAGCCTGTCGGTACG 62.281 65.000 0.00 0.00 46.52 3.67
1407 1704 2.280797 GTGGCTGAGTTCCACGCA 60.281 61.111 0.00 0.00 43.75 5.24
1408 1705 2.031012 TGGCTGAGTTCCACGCAG 59.969 61.111 3.49 3.49 46.68 5.18
1418 1715 1.014044 TTCCACGCAGAAGATGACGC 61.014 55.000 0.00 0.00 33.51 5.19
1472 1772 2.030027 TCCCAGGACAAGTCTGATGT 57.970 50.000 0.00 0.00 34.36 3.06
1489 1789 2.203832 TGCCTCCTCAGGACAGCA 60.204 61.111 9.30 9.30 43.65 4.41
1581 1884 3.798202 CCTGTATGACCAAGCTAAGGAC 58.202 50.000 11.80 6.41 0.00 3.85
1703 2006 1.884926 GCTCGGCAGTCAGGTATGC 60.885 63.158 0.00 0.00 41.80 3.14
1706 2009 1.219124 CGGCAGTCAGGTATGCACT 59.781 57.895 0.00 0.00 44.37 4.40
1711 2014 3.432186 GGCAGTCAGGTATGCACTCATTA 60.432 47.826 0.00 0.00 44.37 1.90
1718 2021 6.367422 GTCAGGTATGCACTCATTAAGCTATC 59.633 42.308 0.00 0.00 34.22 2.08
1722 2025 6.708054 GGTATGCACTCATTAAGCTATCTGTT 59.292 38.462 0.00 0.00 34.22 3.16
1727 2030 8.040727 TGCACTCATTAAGCTATCTGTTTCTTA 58.959 33.333 0.00 0.00 0.00 2.10
1748 2051 8.648557 TCTTATCAACTCTGATTTATGTTCCG 57.351 34.615 0.00 0.00 39.36 4.30
1751 2054 9.529325 TTATCAACTCTGATTTATGTTCCGTAG 57.471 33.333 0.00 0.00 39.36 3.51
1768 2078 4.939052 CGTAGGGTTGAGTCAATATCCT 57.061 45.455 21.16 21.16 0.00 3.24
1770 2080 5.770417 CGTAGGGTTGAGTCAATATCCTAC 58.230 45.833 29.55 29.55 38.86 3.18
1771 2081 5.535406 CGTAGGGTTGAGTCAATATCCTACT 59.465 44.000 32.15 18.69 39.36 2.57
1772 2082 5.878406 AGGGTTGAGTCAATATCCTACTG 57.122 43.478 18.03 0.00 0.00 2.74
1773 2083 4.101741 AGGGTTGAGTCAATATCCTACTGC 59.898 45.833 18.03 0.43 0.00 4.40
1776 2086 6.058183 GGTTGAGTCAATATCCTACTGCATT 58.942 40.000 9.18 0.00 0.00 3.56
1777 2087 6.203723 GGTTGAGTCAATATCCTACTGCATTC 59.796 42.308 9.18 0.00 0.00 2.67
1779 2089 6.519382 TGAGTCAATATCCTACTGCATTCTG 58.481 40.000 0.00 0.00 0.00 3.02
1786 2096 4.365514 TCCTACTGCATTCTGTGGAAAA 57.634 40.909 0.00 0.00 34.90 2.29
1787 2097 4.326826 TCCTACTGCATTCTGTGGAAAAG 58.673 43.478 0.00 0.00 34.90 2.27
1789 2099 4.394300 CCTACTGCATTCTGTGGAAAAGAG 59.606 45.833 0.00 0.00 27.22 2.85
1790 2100 3.152341 ACTGCATTCTGTGGAAAAGAGG 58.848 45.455 0.00 0.00 27.22 3.69
1796 2106 0.595095 CTGTGGAAAAGAGGTGCAGC 59.405 55.000 8.11 8.11 0.00 5.25
1809 2119 0.036010 GTGCAGCCTAGCTCTTTCCA 60.036 55.000 0.00 0.00 36.40 3.53
1810 2120 0.914644 TGCAGCCTAGCTCTTTCCAT 59.085 50.000 0.00 0.00 36.40 3.41
1811 2121 2.118679 TGCAGCCTAGCTCTTTCCATA 58.881 47.619 0.00 0.00 36.40 2.74
1817 2127 6.128063 GCAGCCTAGCTCTTTCCATATATTTG 60.128 42.308 0.00 0.00 36.40 2.32
1841 2152 5.181245 GGCAGTGTACATACAGTTGTTGAAT 59.819 40.000 0.00 0.00 37.75 2.57
1842 2153 6.370442 GGCAGTGTACATACAGTTGTTGAATA 59.630 38.462 0.00 0.00 37.75 1.75
1843 2154 7.065803 GGCAGTGTACATACAGTTGTTGAATAT 59.934 37.037 0.00 0.00 37.75 1.28
1844 2155 8.450964 GCAGTGTACATACAGTTGTTGAATATT 58.549 33.333 0.00 0.00 37.75 1.28
1875 2186 4.992319 AGTAATGTGCGTGTTAGTTGCTTA 59.008 37.500 0.00 0.00 0.00 3.09
1882 2193 3.120991 GCGTGTTAGTTGCTTACTCTGTG 60.121 47.826 0.00 0.00 38.33 3.66
1883 2194 3.120991 CGTGTTAGTTGCTTACTCTGTGC 60.121 47.826 0.00 0.00 38.33 4.57
1884 2195 3.057019 TGTTAGTTGCTTACTCTGTGCG 58.943 45.455 0.00 0.00 38.33 5.34
1885 2196 1.710013 TAGTTGCTTACTCTGTGCGC 58.290 50.000 0.00 0.00 38.33 6.09
1886 2197 0.249868 AGTTGCTTACTCTGTGCGCA 60.250 50.000 5.66 5.66 28.23 6.09
1887 2198 0.110644 GTTGCTTACTCTGTGCGCAC 60.111 55.000 33.11 33.11 0.00 5.34
1888 2199 1.227999 TTGCTTACTCTGTGCGCACC 61.228 55.000 35.72 18.85 0.00 5.01
1889 2200 1.667830 GCTTACTCTGTGCGCACCA 60.668 57.895 35.72 21.95 0.00 4.17
1890 2201 1.021390 GCTTACTCTGTGCGCACCAT 61.021 55.000 35.72 20.75 0.00 3.55
1891 2202 1.002366 CTTACTCTGTGCGCACCATC 58.998 55.000 35.72 13.65 0.00 3.51
1892 2203 0.320050 TTACTCTGTGCGCACCATCA 59.680 50.000 35.72 17.77 0.00 3.07
1893 2204 0.536724 TACTCTGTGCGCACCATCAT 59.463 50.000 35.72 20.07 0.00 2.45
1906 2217 4.376146 GCACCATCATCTTTACTCTCTCC 58.624 47.826 0.00 0.00 0.00 3.71
1907 2218 4.100808 GCACCATCATCTTTACTCTCTCCT 59.899 45.833 0.00 0.00 0.00 3.69
1908 2219 5.396213 GCACCATCATCTTTACTCTCTCCTT 60.396 44.000 0.00 0.00 0.00 3.36
1909 2220 6.183360 GCACCATCATCTTTACTCTCTCCTTA 60.183 42.308 0.00 0.00 0.00 2.69
1910 2221 7.432869 CACCATCATCTTTACTCTCTCCTTAG 58.567 42.308 0.00 0.00 0.00 2.18
1911 2222 6.041523 ACCATCATCTTTACTCTCTCCTTAGC 59.958 42.308 0.00 0.00 0.00 3.09
1912 2223 6.041409 CCATCATCTTTACTCTCTCCTTAGCA 59.959 42.308 0.00 0.00 0.00 3.49
1913 2224 7.256261 CCATCATCTTTACTCTCTCCTTAGCAT 60.256 40.741 0.00 0.00 0.00 3.79
1914 2225 7.048629 TCATCTTTACTCTCTCCTTAGCATG 57.951 40.000 0.00 0.00 0.00 4.06
1915 2226 5.269505 TCTTTACTCTCTCCTTAGCATGC 57.730 43.478 10.51 10.51 0.00 4.06
1916 2227 3.717400 TTACTCTCTCCTTAGCATGCG 57.283 47.619 13.01 0.00 0.00 4.73
1993 2315 7.446001 AGCTACTCTTTTCTGATTTTCCTTG 57.554 36.000 0.00 0.00 0.00 3.61
1998 2320 6.016443 ACTCTTTTCTGATTTTCCTTGCTCAG 60.016 38.462 0.00 0.00 37.14 3.35
2004 2326 5.649395 TCTGATTTTCCTTGCTCAGTTATGG 59.351 40.000 0.00 0.00 37.12 2.74
2045 2395 0.905357 CCTGTTACACCTCTCCCCAG 59.095 60.000 0.00 0.00 0.00 4.45
2061 2411 1.732259 CCCAGTGTTAGAACATCACGC 59.268 52.381 0.00 0.00 41.59 5.34
2082 2432 3.673052 GCGCACATGCTTCCTGAAATTAA 60.673 43.478 0.30 0.00 39.32 1.40
2091 2441 5.163764 TGCTTCCTGAAATTAAGTATGTGCG 60.164 40.000 0.00 0.00 0.00 5.34
2097 2447 7.120579 TCCTGAAATTAAGTATGTGCGTTGATT 59.879 33.333 0.00 0.00 0.00 2.57
2099 2449 9.767684 CTGAAATTAAGTATGTGCGTTGATTTA 57.232 29.630 0.00 0.00 0.00 1.40
2113 2463 9.777843 GTGCGTTGATTTATTTTCTTTGTTAAG 57.222 29.630 0.00 0.00 0.00 1.85
2130 2480 6.105397 TGTTAAGAAGTTAGTGGGGTGTAG 57.895 41.667 0.00 0.00 0.00 2.74
2131 2481 5.603813 TGTTAAGAAGTTAGTGGGGTGTAGT 59.396 40.000 0.00 0.00 0.00 2.73
2133 2483 5.641789 AAGAAGTTAGTGGGGTGTAGTTT 57.358 39.130 0.00 0.00 0.00 2.66
2134 2484 5.224821 AGAAGTTAGTGGGGTGTAGTTTC 57.775 43.478 0.00 0.00 0.00 2.78
2137 2487 3.971971 AGTTAGTGGGGTGTAGTTTCTGT 59.028 43.478 0.00 0.00 0.00 3.41
2140 2490 2.775384 AGTGGGGTGTAGTTTCTGTTGA 59.225 45.455 0.00 0.00 0.00 3.18
2141 2491 3.201266 AGTGGGGTGTAGTTTCTGTTGAA 59.799 43.478 0.00 0.00 0.00 2.69
2142 2492 3.564225 GTGGGGTGTAGTTTCTGTTGAAG 59.436 47.826 0.00 0.00 33.28 3.02
2143 2493 3.146847 GGGGTGTAGTTTCTGTTGAAGG 58.853 50.000 0.00 0.00 33.28 3.46
2148 2498 6.350696 GGGTGTAGTTTCTGTTGAAGGTTTTT 60.351 38.462 0.00 0.00 33.28 1.94
2187 2537 7.260603 GCATGGTTAAAATTGAGCAGTAGAAT 58.739 34.615 0.00 0.00 0.00 2.40
2300 2650 4.932799 TGATTTTGCTTCATTTGGCATGAG 59.067 37.500 0.00 0.00 38.30 2.90
2332 2682 9.313118 TGTACACTGCTAAATACTGATTATGTG 57.687 33.333 0.00 0.00 0.00 3.21
2514 2869 5.556355 ATTGTCACTGATGTGCATGTTAG 57.444 39.130 0.00 0.00 43.49 2.34
2523 2878 3.624326 TGTGCATGTTAGTGTTGCTTC 57.376 42.857 0.00 0.00 37.28 3.86
2540 2895 1.133216 CTTCGAGCAGTGCTAGCAGTA 59.867 52.381 24.34 6.30 39.88 2.74
2541 2896 1.393603 TCGAGCAGTGCTAGCAGTAT 58.606 50.000 24.34 15.96 39.88 2.12
2542 2897 1.066152 TCGAGCAGTGCTAGCAGTATG 59.934 52.381 24.34 19.85 39.88 2.39
2554 2909 2.174334 CAGTATGCCTGGTGTGTGC 58.826 57.895 0.00 0.00 37.54 4.57
2555 2910 1.002134 AGTATGCCTGGTGTGTGCC 60.002 57.895 0.00 0.00 0.00 5.01
2556 2911 1.303236 GTATGCCTGGTGTGTGCCA 60.303 57.895 0.00 0.00 36.97 4.92
2557 2912 0.680921 GTATGCCTGGTGTGTGCCAT 60.681 55.000 0.00 0.00 37.96 4.40
2558 2913 0.394216 TATGCCTGGTGTGTGCCATC 60.394 55.000 0.00 0.00 37.96 3.51
2559 2914 2.282391 GCCTGGTGTGTGCCATCA 60.282 61.111 0.00 0.00 37.96 3.07
2561 2916 4.806936 CTGGTGTGTGCCATCAGT 57.193 55.556 0.00 0.00 45.62 3.41
2562 2917 3.933879 CTGGTGTGTGCCATCAGTA 57.066 52.632 0.00 0.00 45.62 2.74
2563 2918 1.730501 CTGGTGTGTGCCATCAGTAG 58.269 55.000 0.00 0.00 45.62 2.57
2564 2919 1.276138 CTGGTGTGTGCCATCAGTAGA 59.724 52.381 0.00 0.00 45.62 2.59
2565 2920 1.001974 TGGTGTGTGCCATCAGTAGAC 59.998 52.381 0.00 0.00 32.81 2.59
2566 2921 1.276421 GGTGTGTGCCATCAGTAGACT 59.724 52.381 0.00 0.00 0.00 3.24
2567 2922 2.611518 GTGTGTGCCATCAGTAGACTC 58.388 52.381 0.00 0.00 0.00 3.36
2568 2923 2.232452 GTGTGTGCCATCAGTAGACTCT 59.768 50.000 0.00 0.00 0.00 3.24
2569 2924 2.493675 TGTGTGCCATCAGTAGACTCTC 59.506 50.000 0.00 0.00 0.00 3.20
2570 2925 2.103373 TGTGCCATCAGTAGACTCTCC 58.897 52.381 0.00 0.00 0.00 3.71
2571 2926 2.291865 TGTGCCATCAGTAGACTCTCCT 60.292 50.000 0.00 0.00 0.00 3.69
2572 2927 2.360801 GTGCCATCAGTAGACTCTCCTC 59.639 54.545 0.00 0.00 0.00 3.71
2573 2928 2.024941 TGCCATCAGTAGACTCTCCTCA 60.025 50.000 0.00 0.00 0.00 3.86
2574 2929 2.622942 GCCATCAGTAGACTCTCCTCAG 59.377 54.545 0.00 0.00 0.00 3.35
2575 2930 2.622942 CCATCAGTAGACTCTCCTCAGC 59.377 54.545 0.00 0.00 0.00 4.26
2576 2931 3.286353 CATCAGTAGACTCTCCTCAGCA 58.714 50.000 0.00 0.00 0.00 4.41
2577 2932 3.660970 TCAGTAGACTCTCCTCAGCAT 57.339 47.619 0.00 0.00 0.00 3.79
2578 2933 3.286353 TCAGTAGACTCTCCTCAGCATG 58.714 50.000 0.00 0.00 37.54 4.06
2579 2934 3.023119 CAGTAGACTCTCCTCAGCATGT 58.977 50.000 0.00 0.00 37.40 3.21
2580 2935 3.023119 AGTAGACTCTCCTCAGCATGTG 58.977 50.000 0.00 0.00 37.40 3.21
2581 2936 1.935799 AGACTCTCCTCAGCATGTGT 58.064 50.000 0.00 0.00 37.40 3.72
2582 2937 2.255406 AGACTCTCCTCAGCATGTGTT 58.745 47.619 0.00 0.00 37.40 3.32
2583 2938 2.233431 AGACTCTCCTCAGCATGTGTTC 59.767 50.000 0.00 0.00 37.40 3.18
2584 2939 1.973515 ACTCTCCTCAGCATGTGTTCA 59.026 47.619 0.00 0.00 37.40 3.18
2585 2940 2.028294 ACTCTCCTCAGCATGTGTTCAG 60.028 50.000 0.00 0.00 37.40 3.02
2586 2941 2.233186 CTCTCCTCAGCATGTGTTCAGA 59.767 50.000 0.00 0.00 37.40 3.27
2587 2942 2.836372 TCTCCTCAGCATGTGTTCAGAT 59.164 45.455 0.00 0.00 37.40 2.90
2588 2943 3.262660 TCTCCTCAGCATGTGTTCAGATT 59.737 43.478 0.00 0.00 37.40 2.40
2589 2944 3.340928 TCCTCAGCATGTGTTCAGATTG 58.659 45.455 0.00 0.00 37.40 2.67
2590 2945 2.422479 CCTCAGCATGTGTTCAGATTGG 59.578 50.000 0.00 0.00 37.40 3.16
2591 2946 1.814394 TCAGCATGTGTTCAGATTGGC 59.186 47.619 0.00 0.00 37.40 4.52
2592 2947 1.135199 CAGCATGTGTTCAGATTGGCC 60.135 52.381 0.00 0.00 0.00 5.36
2593 2948 1.180029 GCATGTGTTCAGATTGGCCT 58.820 50.000 3.32 0.00 0.00 5.19
2594 2949 2.025981 AGCATGTGTTCAGATTGGCCTA 60.026 45.455 3.32 0.00 0.00 3.93
2595 2950 2.357009 GCATGTGTTCAGATTGGCCTAG 59.643 50.000 3.32 0.00 0.00 3.02
2596 2951 3.877559 CATGTGTTCAGATTGGCCTAGA 58.122 45.455 3.32 0.00 0.00 2.43
2597 2952 4.264253 CATGTGTTCAGATTGGCCTAGAA 58.736 43.478 3.32 0.00 0.00 2.10
2598 2953 4.574674 TGTGTTCAGATTGGCCTAGAAT 57.425 40.909 3.32 0.00 0.00 2.40
2599 2954 4.922206 TGTGTTCAGATTGGCCTAGAATT 58.078 39.130 3.32 0.00 0.00 2.17
2600 2955 5.324409 TGTGTTCAGATTGGCCTAGAATTT 58.676 37.500 3.32 0.00 0.00 1.82
2601 2956 5.774690 TGTGTTCAGATTGGCCTAGAATTTT 59.225 36.000 3.32 0.00 0.00 1.82
2602 2957 6.071952 TGTGTTCAGATTGGCCTAGAATTTTC 60.072 38.462 3.32 0.00 0.00 2.29
2603 2958 6.151817 GTGTTCAGATTGGCCTAGAATTTTCT 59.848 38.462 3.32 0.00 41.24 2.52
2604 2959 6.721208 TGTTCAGATTGGCCTAGAATTTTCTT 59.279 34.615 3.32 0.00 38.70 2.52
2605 2960 7.233348 TGTTCAGATTGGCCTAGAATTTTCTTT 59.767 33.333 3.32 0.00 38.70 2.52
2606 2961 7.161773 TCAGATTGGCCTAGAATTTTCTTTG 57.838 36.000 3.32 0.00 38.70 2.77
2607 2962 6.947733 TCAGATTGGCCTAGAATTTTCTTTGA 59.052 34.615 3.32 0.00 38.70 2.69
2608 2963 7.031975 CAGATTGGCCTAGAATTTTCTTTGAC 58.968 38.462 3.32 0.00 38.70 3.18
2609 2964 5.371115 TTGGCCTAGAATTTTCTTTGACG 57.629 39.130 3.32 0.00 38.70 4.35
2610 2965 3.190535 TGGCCTAGAATTTTCTTTGACGC 59.809 43.478 3.32 0.00 38.70 5.19
2611 2966 3.440522 GGCCTAGAATTTTCTTTGACGCT 59.559 43.478 0.00 0.00 38.70 5.07
2612 2967 4.082733 GGCCTAGAATTTTCTTTGACGCTT 60.083 41.667 0.00 0.00 38.70 4.68
2613 2968 5.123344 GGCCTAGAATTTTCTTTGACGCTTA 59.877 40.000 0.00 0.00 38.70 3.09
2614 2969 6.251549 GCCTAGAATTTTCTTTGACGCTTAG 58.748 40.000 0.00 0.00 38.70 2.18
2615 2970 6.251549 CCTAGAATTTTCTTTGACGCTTAGC 58.748 40.000 0.00 0.00 38.70 3.09
2616 2971 4.712763 AGAATTTTCTTTGACGCTTAGCG 58.287 39.130 25.64 25.64 46.38 4.26
2634 2989 1.060698 GCGTAATGTTCCTTCGAGCAC 59.939 52.381 0.00 0.00 31.42 4.40
2637 2992 3.791887 CGTAATGTTCCTTCGAGCACTAG 59.208 47.826 0.00 0.00 31.42 2.57
2651 3006 7.464830 TCGAGCACTAGTAGCAAAATTTATC 57.535 36.000 16.27 5.13 0.00 1.75
2662 3017 8.792633 AGTAGCAAAATTTATCTTGTGCAGTAA 58.207 29.630 11.67 0.00 34.44 2.24
2706 3061 3.477210 CCTAGTTATGGGCCTGAAGAC 57.523 52.381 4.53 0.00 0.00 3.01
2779 3134 1.227674 GCATCTCCCCCTGTTAGCG 60.228 63.158 0.00 0.00 0.00 4.26
2803 3158 6.562455 CGGGGCGTAGTTTTTGTTTAAATTTG 60.562 38.462 0.00 0.00 0.00 2.32
2823 3178 4.284829 TGATAGAGATGTTGTGTGGCAA 57.715 40.909 0.00 0.00 34.16 4.52
2826 3181 3.769739 AGAGATGTTGTGTGGCAAGTA 57.230 42.857 0.00 0.00 37.83 2.24
2827 3182 3.668447 AGAGATGTTGTGTGGCAAGTAG 58.332 45.455 0.00 0.00 37.83 2.57
2828 3183 2.154462 AGATGTTGTGTGGCAAGTAGC 58.846 47.619 0.00 0.00 44.65 3.58
2848 3203 2.612972 GCAAGTAGCAAGTAGTCAGCCA 60.613 50.000 0.00 0.00 44.79 4.75
2849 3204 3.664107 CAAGTAGCAAGTAGTCAGCCAA 58.336 45.455 0.00 0.00 0.00 4.52
2850 3205 4.065088 CAAGTAGCAAGTAGTCAGCCAAA 58.935 43.478 0.00 0.00 0.00 3.28
2851 3206 4.559862 AGTAGCAAGTAGTCAGCCAAAT 57.440 40.909 0.00 0.00 0.00 2.32
2852 3207 4.256920 AGTAGCAAGTAGTCAGCCAAATG 58.743 43.478 0.00 0.00 0.00 2.32
2853 3208 3.423539 AGCAAGTAGTCAGCCAAATGA 57.576 42.857 0.00 0.00 0.00 2.57
2890 3270 5.932303 TGAGATACAGCTTTGGTTTCAGTAC 59.068 40.000 0.00 0.00 0.00 2.73
3028 3412 2.231964 GCAGACAGCAAAAATCCATCCA 59.768 45.455 0.00 0.00 44.79 3.41
3070 3454 5.710513 TGATCCAGATTTCACTTTGGTTG 57.289 39.130 0.00 0.00 32.51 3.77
3083 3467 6.822442 TCACTTTGGTTGAGTATGAACTACA 58.178 36.000 0.00 0.00 35.56 2.74
3130 3533 6.426937 GCTGAACTTGGAATGAACTTAGTACA 59.573 38.462 0.00 0.00 0.00 2.90
3362 3791 8.202811 CCAGTTCTCATCTCTATCTGATTCAAA 58.797 37.037 0.00 0.00 0.00 2.69
3375 3804 5.904941 TCTGATTCAAACATGTTTGCTGTT 58.095 33.333 35.90 23.34 46.92 3.16
3376 3805 5.749588 TCTGATTCAAACATGTTTGCTGTTG 59.250 36.000 35.90 26.11 46.92 3.33
3382 3811 1.925847 ACATGTTTGCTGTTGCGTTTG 59.074 42.857 0.00 0.00 43.34 2.93
3406 3835 8.241497 TGTATTTACAGTGGAATACTCCGTAT 57.759 34.615 21.92 2.78 45.85 3.06
3415 3844 9.273016 CAGTGGAATACTCCGTATTATCATTTT 57.727 33.333 0.00 0.00 45.85 1.82
3418 3847 9.489084 TGGAATACTCCGTATTATCATTTTCTG 57.511 33.333 0.00 0.00 45.85 3.02
3455 3884 8.137437 CAGTCAGTAAATTGGTTCTTGTCATTT 58.863 33.333 0.00 0.00 0.00 2.32
3560 4097 9.099454 GTTTATACAAGTCTTCTATGTGGGAAG 57.901 37.037 0.00 0.00 40.85 3.46
3675 4215 9.730705 ATGATATCATCTTGTACATTACCTTGG 57.269 33.333 12.62 0.00 28.78 3.61
3681 4221 7.390440 TCATCTTGTACATTACCTTGGTTCTTG 59.610 37.037 0.00 0.00 0.00 3.02
3770 4337 0.955428 TGATGTCCGTTGCCTTCTGC 60.955 55.000 0.00 0.00 41.77 4.26
3782 4349 1.933853 GCCTTCTGCGAATCGTTATGT 59.066 47.619 4.07 0.00 0.00 2.29
3834 4402 4.573021 TGTCAGTTGATGATCCAATCCA 57.427 40.909 0.00 0.00 40.92 3.41
3919 4499 6.543831 CCCTGGAAGTCATTATAACCAAGAAG 59.456 42.308 0.00 0.00 0.00 2.85
3920 4500 7.338710 CCTGGAAGTCATTATAACCAAGAAGA 58.661 38.462 0.00 0.00 0.00 2.87
3921 4501 7.829211 CCTGGAAGTCATTATAACCAAGAAGAA 59.171 37.037 0.00 0.00 0.00 2.52
4062 4645 2.829720 TGCTCTTGTACCCATAGTCGTT 59.170 45.455 0.00 0.00 0.00 3.85
4146 4764 0.527565 ACGAATGGCTGTTGGAATGC 59.472 50.000 0.00 0.00 0.00 3.56
4172 4790 1.226379 CGTGCGGTGAAATCCATGC 60.226 57.895 0.00 0.00 0.00 4.06
4174 4792 0.527565 GTGCGGTGAAATCCATGCTT 59.472 50.000 0.00 0.00 32.39 3.91
4175 4793 0.527113 TGCGGTGAAATCCATGCTTG 59.473 50.000 0.00 0.00 32.39 4.01
4176 4794 0.810648 GCGGTGAAATCCATGCTTGA 59.189 50.000 0.22 0.00 0.00 3.02
4177 4795 1.202222 GCGGTGAAATCCATGCTTGAG 60.202 52.381 0.22 0.00 0.00 3.02
4178 4796 2.358957 CGGTGAAATCCATGCTTGAGA 58.641 47.619 0.22 0.00 0.00 3.27
4179 4797 2.749076 CGGTGAAATCCATGCTTGAGAA 59.251 45.455 0.22 0.00 0.00 2.87
4180 4798 3.379372 CGGTGAAATCCATGCTTGAGAAT 59.621 43.478 0.22 0.00 0.00 2.40
4182 4800 5.107133 GGTGAAATCCATGCTTGAGAATTG 58.893 41.667 0.22 0.00 0.00 2.32
4183 4801 5.107133 GTGAAATCCATGCTTGAGAATTGG 58.893 41.667 0.22 0.00 0.00 3.16
4184 4802 4.773674 TGAAATCCATGCTTGAGAATTGGT 59.226 37.500 0.22 0.00 0.00 3.67
4185 4803 5.951148 TGAAATCCATGCTTGAGAATTGGTA 59.049 36.000 0.22 0.00 0.00 3.25
4186 4804 5.841957 AATCCATGCTTGAGAATTGGTAC 57.158 39.130 0.22 0.00 0.00 3.34
4194 4835 4.860022 CTTGAGAATTGGTACCTGGGAAT 58.140 43.478 14.36 1.06 0.00 3.01
4212 4853 6.454795 TGGGAATCTATTTTGCTTTTGTGTC 58.545 36.000 0.00 0.00 0.00 3.67
4240 4881 3.586100 AAGCTGTGTTTTTGGTCGTTT 57.414 38.095 0.00 0.00 0.00 3.60
4254 4895 9.849166 TTTTTGGTCGTTTAGAATTTATCCATC 57.151 29.630 0.00 0.00 0.00 3.51
4257 4898 7.981142 TGGTCGTTTAGAATTTATCCATCAAC 58.019 34.615 0.00 0.00 0.00 3.18
4258 4899 7.608376 TGGTCGTTTAGAATTTATCCATCAACA 59.392 33.333 0.00 0.00 0.00 3.33
4259 4900 8.621286 GGTCGTTTAGAATTTATCCATCAACAT 58.379 33.333 0.00 0.00 0.00 2.71
4275 4916 9.921637 TCCATCAACATAAATCTTTTGTTAACC 57.078 29.630 2.48 0.00 32.57 2.85
4276 4917 9.703892 CCATCAACATAAATCTTTTGTTAACCA 57.296 29.630 2.48 0.00 32.57 3.67
4368 5010 4.109766 TCACGCGTAAATCTGGATACTTG 58.890 43.478 13.44 0.00 37.61 3.16
4380 5022 6.139679 TCTGGATACTTGACCAAAAATCCT 57.860 37.500 17.06 0.00 34.87 3.24
4381 5023 5.945784 TCTGGATACTTGACCAAAAATCCTG 59.054 40.000 17.06 16.42 34.87 3.86
4428 5071 5.267776 ACGTATTTGTTTGTCTTGTTTCGG 58.732 37.500 0.00 0.00 0.00 4.30
4584 5231 3.119316 ACTGGAGCTGACTGTCTTTATCG 60.119 47.826 9.51 0.00 0.00 2.92
4610 5257 8.328864 GTCGAAAATCCATATACTTTCACTGAC 58.671 37.037 0.00 0.00 0.00 3.51
4611 5258 7.494625 TCGAAAATCCATATACTTTCACTGACC 59.505 37.037 0.00 0.00 0.00 4.02
4648 5295 3.198872 GCCAGTTAAGTAGGATGAGTGC 58.801 50.000 3.72 0.00 0.00 4.40
4797 5469 4.934602 ACAAAACCCTGTCAACAAAACATG 59.065 37.500 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.846430 CCCGACCGAGGGCTTACC 61.846 72.222 0.00 0.00 45.72 2.85
20 21 3.897320 GATCGACCCGACCCGACC 61.897 72.222 0.00 0.00 39.18 4.79
21 22 3.897320 GGATCGACCCGACCCGAC 61.897 72.222 0.00 0.00 39.18 4.79
30 31 1.116536 GGAGAAGAGGGGGATCGACC 61.117 65.000 0.00 0.00 38.08 4.79
31 32 0.105913 AGGAGAAGAGGGGGATCGAC 60.106 60.000 0.00 0.00 0.00 4.20
32 33 0.637195 AAGGAGAAGAGGGGGATCGA 59.363 55.000 0.00 0.00 0.00 3.59
33 34 1.044611 GAAGGAGAAGAGGGGGATCG 58.955 60.000 0.00 0.00 0.00 3.69
34 35 2.325484 GAGAAGGAGAAGAGGGGGATC 58.675 57.143 0.00 0.00 0.00 3.36
35 36 1.061735 GGAGAAGGAGAAGAGGGGGAT 60.062 57.143 0.00 0.00 0.00 3.85
36 37 0.340208 GGAGAAGGAGAAGAGGGGGA 59.660 60.000 0.00 0.00 0.00 4.81
37 38 0.341609 AGGAGAAGGAGAAGAGGGGG 59.658 60.000 0.00 0.00 0.00 5.40
38 39 2.115427 GAAGGAGAAGGAGAAGAGGGG 58.885 57.143 0.00 0.00 0.00 4.79
39 40 3.031013 GAGAAGGAGAAGGAGAAGAGGG 58.969 54.545 0.00 0.00 0.00 4.30
40 41 3.031013 GGAGAAGGAGAAGGAGAAGAGG 58.969 54.545 0.00 0.00 0.00 3.69
41 42 3.981212 AGGAGAAGGAGAAGGAGAAGAG 58.019 50.000 0.00 0.00 0.00 2.85
42 43 4.093011 CAAGGAGAAGGAGAAGGAGAAGA 58.907 47.826 0.00 0.00 0.00 2.87
43 44 3.837731 ACAAGGAGAAGGAGAAGGAGAAG 59.162 47.826 0.00 0.00 0.00 2.85
44 45 3.835395 GACAAGGAGAAGGAGAAGGAGAA 59.165 47.826 0.00 0.00 0.00 2.87
45 46 3.436243 GACAAGGAGAAGGAGAAGGAGA 58.564 50.000 0.00 0.00 0.00 3.71
46 47 2.499693 GGACAAGGAGAAGGAGAAGGAG 59.500 54.545 0.00 0.00 0.00 3.69
47 48 2.112691 AGGACAAGGAGAAGGAGAAGGA 59.887 50.000 0.00 0.00 0.00 3.36
48 49 2.545810 AGGACAAGGAGAAGGAGAAGG 58.454 52.381 0.00 0.00 0.00 3.46
49 50 3.837731 AGAAGGACAAGGAGAAGGAGAAG 59.162 47.826 0.00 0.00 0.00 2.85
50 51 3.835395 GAGAAGGACAAGGAGAAGGAGAA 59.165 47.826 0.00 0.00 0.00 2.87
51 52 3.436243 GAGAAGGACAAGGAGAAGGAGA 58.564 50.000 0.00 0.00 0.00 3.71
52 53 2.499693 GGAGAAGGACAAGGAGAAGGAG 59.500 54.545 0.00 0.00 0.00 3.69
53 54 2.112691 AGGAGAAGGACAAGGAGAAGGA 59.887 50.000 0.00 0.00 0.00 3.36
54 55 2.499693 GAGGAGAAGGACAAGGAGAAGG 59.500 54.545 0.00 0.00 0.00 3.46
55 56 3.195396 CAGAGGAGAAGGACAAGGAGAAG 59.805 52.174 0.00 0.00 0.00 2.85
56 57 3.169099 CAGAGGAGAAGGACAAGGAGAA 58.831 50.000 0.00 0.00 0.00 2.87
57 58 2.380249 TCAGAGGAGAAGGACAAGGAGA 59.620 50.000 0.00 0.00 0.00 3.71
62 63 2.568956 CCACATCAGAGGAGAAGGACAA 59.431 50.000 0.00 0.00 0.00 3.18
64 65 2.183679 ACCACATCAGAGGAGAAGGAC 58.816 52.381 0.00 0.00 0.00 3.85
77 78 0.168128 GCGCACAACCTAACCACATC 59.832 55.000 0.30 0.00 0.00 3.06
122 123 6.303021 GCATTTTGCTGGATCTTTCAAAAA 57.697 33.333 16.90 8.81 40.40 1.94
123 124 5.927954 GCATTTTGCTGGATCTTTCAAAA 57.072 34.783 15.97 15.97 40.96 2.44
137 138 1.657094 CGAATCAAGCCAGCATTTTGC 59.343 47.619 0.00 0.00 45.46 3.68
139 140 4.460948 AATCGAATCAAGCCAGCATTTT 57.539 36.364 0.00 0.00 0.00 1.82
140 141 4.460948 AAATCGAATCAAGCCAGCATTT 57.539 36.364 0.00 0.00 0.00 2.32
141 142 4.498682 GCTAAATCGAATCAAGCCAGCATT 60.499 41.667 0.00 0.00 0.00 3.56
142 143 3.004106 GCTAAATCGAATCAAGCCAGCAT 59.996 43.478 0.00 0.00 0.00 3.79
143 144 2.355756 GCTAAATCGAATCAAGCCAGCA 59.644 45.455 0.00 0.00 0.00 4.41
144 145 2.355756 TGCTAAATCGAATCAAGCCAGC 59.644 45.455 9.14 0.00 32.14 4.85
145 146 3.003068 CCTGCTAAATCGAATCAAGCCAG 59.997 47.826 9.14 7.14 32.14 4.85
146 147 2.945008 CCTGCTAAATCGAATCAAGCCA 59.055 45.455 9.14 0.00 32.14 4.75
147 148 3.206150 TCCTGCTAAATCGAATCAAGCC 58.794 45.455 9.14 0.00 32.14 4.35
148 149 4.260948 CCTTCCTGCTAAATCGAATCAAGC 60.261 45.833 0.00 0.00 0.00 4.01
149 150 5.118990 TCCTTCCTGCTAAATCGAATCAAG 58.881 41.667 0.00 0.00 0.00 3.02
150 151 5.097742 TCCTTCCTGCTAAATCGAATCAA 57.902 39.130 0.00 0.00 0.00 2.57
151 152 4.753516 TCCTTCCTGCTAAATCGAATCA 57.246 40.909 0.00 0.00 0.00 2.57
152 153 4.453819 CCATCCTTCCTGCTAAATCGAATC 59.546 45.833 0.00 0.00 0.00 2.52
153 154 4.103153 TCCATCCTTCCTGCTAAATCGAAT 59.897 41.667 0.00 0.00 0.00 3.34
154 155 3.454447 TCCATCCTTCCTGCTAAATCGAA 59.546 43.478 0.00 0.00 0.00 3.71
155 156 3.038280 TCCATCCTTCCTGCTAAATCGA 58.962 45.455 0.00 0.00 0.00 3.59
156 157 3.475566 TCCATCCTTCCTGCTAAATCG 57.524 47.619 0.00 0.00 0.00 3.34
157 158 5.002516 CAGATCCATCCTTCCTGCTAAATC 58.997 45.833 0.00 0.00 0.00 2.17
158 159 4.662179 TCAGATCCATCCTTCCTGCTAAAT 59.338 41.667 0.00 0.00 0.00 1.40
159 160 4.040047 TCAGATCCATCCTTCCTGCTAAA 58.960 43.478 0.00 0.00 0.00 1.85
160 161 3.657610 TCAGATCCATCCTTCCTGCTAA 58.342 45.455 0.00 0.00 0.00 3.09
161 162 3.334910 TCAGATCCATCCTTCCTGCTA 57.665 47.619 0.00 0.00 0.00 3.49
162 163 2.187239 TCAGATCCATCCTTCCTGCT 57.813 50.000 0.00 0.00 0.00 4.24
163 164 3.072768 AGAATCAGATCCATCCTTCCTGC 59.927 47.826 0.00 0.00 0.00 4.85
164 165 4.347292 TCAGAATCAGATCCATCCTTCCTG 59.653 45.833 0.00 0.00 0.00 3.86
165 166 4.564799 TCAGAATCAGATCCATCCTTCCT 58.435 43.478 0.00 0.00 0.00 3.36
166 167 4.970860 TCAGAATCAGATCCATCCTTCC 57.029 45.455 0.00 0.00 0.00 3.46
175 176 3.666274 CTGGCTGGATCAGAATCAGATC 58.334 50.000 7.05 7.05 40.86 2.75
176 177 2.224572 GCTGGCTGGATCAGAATCAGAT 60.225 50.000 7.37 0.00 34.36 2.90
177 178 1.140452 GCTGGCTGGATCAGAATCAGA 59.860 52.381 7.37 0.00 34.36 3.27
178 179 1.141254 AGCTGGCTGGATCAGAATCAG 59.859 52.381 0.00 4.57 34.36 2.90
179 180 1.140452 GAGCTGGCTGGATCAGAATCA 59.860 52.381 0.00 0.00 34.36 2.57
180 181 1.542987 GGAGCTGGCTGGATCAGAATC 60.543 57.143 0.00 0.00 34.36 2.52
181 182 0.473326 GGAGCTGGCTGGATCAGAAT 59.527 55.000 0.00 0.00 34.36 2.40
182 183 0.911045 TGGAGCTGGCTGGATCAGAA 60.911 55.000 0.00 0.00 34.36 3.02
183 184 1.306397 TGGAGCTGGCTGGATCAGA 60.306 57.895 0.00 0.00 34.36 3.27
184 185 1.146485 CTGGAGCTGGCTGGATCAG 59.854 63.158 0.00 0.00 35.49 2.90
185 186 2.372890 CCTGGAGCTGGCTGGATCA 61.373 63.158 0.00 0.00 0.00 2.92
186 187 2.322638 GACCTGGAGCTGGCTGGATC 62.323 65.000 0.00 0.00 0.00 3.36
187 188 2.285969 ACCTGGAGCTGGCTGGAT 60.286 61.111 0.00 0.00 0.00 3.41
188 189 3.005539 GACCTGGAGCTGGCTGGA 61.006 66.667 0.00 0.00 0.00 3.86
189 190 3.007920 AGACCTGGAGCTGGCTGG 61.008 66.667 0.00 0.00 0.00 4.85
190 191 2.583520 GAGACCTGGAGCTGGCTG 59.416 66.667 0.00 0.00 0.00 4.85
191 192 2.686835 GGAGACCTGGAGCTGGCT 60.687 66.667 0.00 0.00 0.00 4.75
192 193 2.250741 GAAGGAGACCTGGAGCTGGC 62.251 65.000 0.00 0.00 32.13 4.85
193 194 1.621672 GGAAGGAGACCTGGAGCTGG 61.622 65.000 0.00 0.00 32.13 4.85
194 195 0.617249 AGGAAGGAGACCTGGAGCTG 60.617 60.000 0.00 0.00 36.30 4.24
195 196 0.118144 AAGGAAGGAGACCTGGAGCT 59.882 55.000 0.00 0.00 37.85 4.09
196 197 0.539518 GAAGGAAGGAGACCTGGAGC 59.460 60.000 0.00 0.00 37.85 4.70
197 198 1.199615 GGAAGGAAGGAGACCTGGAG 58.800 60.000 0.00 0.00 37.85 3.86
198 199 0.793617 AGGAAGGAAGGAGACCTGGA 59.206 55.000 0.00 0.00 37.85 3.86
199 200 1.557371 GAAGGAAGGAAGGAGACCTGG 59.443 57.143 0.00 0.00 37.85 4.45
200 201 1.557371 GGAAGGAAGGAAGGAGACCTG 59.443 57.143 0.00 0.00 37.85 4.00
201 202 1.439143 AGGAAGGAAGGAAGGAGACCT 59.561 52.381 0.00 0.00 39.69 3.85
202 203 1.959710 AGGAAGGAAGGAAGGAGACC 58.040 55.000 0.00 0.00 0.00 3.85
203 204 2.237643 GGAAGGAAGGAAGGAAGGAGAC 59.762 54.545 0.00 0.00 0.00 3.36
204 205 2.114506 AGGAAGGAAGGAAGGAAGGAGA 59.885 50.000 0.00 0.00 0.00 3.71
205 206 2.556766 AGGAAGGAAGGAAGGAAGGAG 58.443 52.381 0.00 0.00 0.00 3.69
206 207 2.644798 CAAGGAAGGAAGGAAGGAAGGA 59.355 50.000 0.00 0.00 0.00 3.36
207 208 2.376855 ACAAGGAAGGAAGGAAGGAAGG 59.623 50.000 0.00 0.00 0.00 3.46
208 209 3.797559 ACAAGGAAGGAAGGAAGGAAG 57.202 47.619 0.00 0.00 0.00 3.46
209 210 4.240323 AGTACAAGGAAGGAAGGAAGGAA 58.760 43.478 0.00 0.00 0.00 3.36
210 211 3.838903 GAGTACAAGGAAGGAAGGAAGGA 59.161 47.826 0.00 0.00 0.00 3.36
211 212 3.055021 GGAGTACAAGGAAGGAAGGAAGG 60.055 52.174 0.00 0.00 0.00 3.46
212 213 3.583086 TGGAGTACAAGGAAGGAAGGAAG 59.417 47.826 0.00 0.00 0.00 3.46
213 214 3.583086 CTGGAGTACAAGGAAGGAAGGAA 59.417 47.826 0.00 0.00 0.00 3.36
214 215 3.173965 CTGGAGTACAAGGAAGGAAGGA 58.826 50.000 0.00 0.00 0.00 3.36
233 234 4.580167 CCATCCACCAAACCATACATACTG 59.420 45.833 0.00 0.00 0.00 2.74
260 314 0.755698 GGACGGGACCTCATAGAGCA 60.756 60.000 0.00 0.00 0.00 4.26
261 315 1.797211 CGGACGGGACCTCATAGAGC 61.797 65.000 0.00 0.00 0.00 4.09
262 316 0.465824 ACGGACGGGACCTCATAGAG 60.466 60.000 0.00 0.00 0.00 2.43
263 317 0.465097 GACGGACGGGACCTCATAGA 60.465 60.000 0.00 0.00 0.00 1.98
264 318 1.783031 CGACGGACGGGACCTCATAG 61.783 65.000 0.00 0.00 38.46 2.23
265 319 1.820906 CGACGGACGGGACCTCATA 60.821 63.158 0.00 0.00 38.46 2.15
266 320 3.138798 CGACGGACGGGACCTCAT 61.139 66.667 0.00 0.00 38.46 2.90
279 333 2.393768 AATCAGCAGCAAGGCGACG 61.394 57.895 0.00 0.00 39.27 5.12
280 334 1.136147 CAATCAGCAGCAAGGCGAC 59.864 57.895 0.00 0.00 39.27 5.19
281 335 0.606130 TTCAATCAGCAGCAAGGCGA 60.606 50.000 0.00 0.00 39.27 5.54
282 336 0.455633 GTTCAATCAGCAGCAAGGCG 60.456 55.000 0.00 0.00 39.27 5.52
283 337 0.108945 GGTTCAATCAGCAGCAAGGC 60.109 55.000 0.00 0.00 0.00 4.35
285 339 2.608752 GGTTGGTTCAATCAGCAGCAAG 60.609 50.000 0.00 0.00 31.76 4.01
289 343 2.673043 GCATGGTTGGTTCAATCAGCAG 60.673 50.000 0.00 0.00 37.91 4.24
290 344 1.273048 GCATGGTTGGTTCAATCAGCA 59.727 47.619 0.00 0.00 37.91 4.41
291 345 1.547372 AGCATGGTTGGTTCAATCAGC 59.453 47.619 0.00 4.22 37.91 4.26
292 346 5.824624 AGTATAGCATGGTTGGTTCAATCAG 59.175 40.000 1.12 0.00 37.91 2.90
293 347 5.754782 AGTATAGCATGGTTGGTTCAATCA 58.245 37.500 1.12 0.00 38.89 2.57
294 348 7.573843 GCATAGTATAGCATGGTTGGTTCAATC 60.574 40.741 1.12 0.00 34.79 2.67
295 349 6.207417 GCATAGTATAGCATGGTTGGTTCAAT 59.793 38.462 1.12 0.00 34.79 2.57
298 352 5.308825 AGCATAGTATAGCATGGTTGGTTC 58.691 41.667 1.12 0.00 34.79 3.62
299 353 5.310409 AGCATAGTATAGCATGGTTGGTT 57.690 39.130 1.12 0.00 34.79 3.67
300 354 4.982241 AGCATAGTATAGCATGGTTGGT 57.018 40.909 1.12 0.00 37.36 3.67
301 355 6.051717 GGATAGCATAGTATAGCATGGTTGG 58.948 44.000 1.12 0.00 34.82 3.77
302 356 6.882656 AGGATAGCATAGTATAGCATGGTTG 58.117 40.000 1.12 0.00 34.82 3.77
303 357 8.789767 ATAGGATAGCATAGTATAGCATGGTT 57.210 34.615 1.12 0.00 34.82 3.67
304 358 7.453126 GGATAGGATAGCATAGTATAGCATGGT 59.547 40.741 1.62 1.62 36.82 3.55
305 359 7.673504 AGGATAGGATAGCATAGTATAGCATGG 59.326 40.741 0.00 0.00 0.00 3.66
306 360 8.648698 AGGATAGGATAGCATAGTATAGCATG 57.351 38.462 7.14 0.00 0.00 4.06
308 362 9.967451 GATAGGATAGGATAGCATAGTATAGCA 57.033 37.037 7.14 0.00 0.00 3.49
309 363 9.403583 GGATAGGATAGGATAGCATAGTATAGC 57.596 40.741 0.00 0.00 0.00 2.97
314 368 8.620177 GGATAGGATAGGATAGGATAGCATAGT 58.380 40.741 0.00 0.00 0.00 2.12
315 369 8.845793 AGGATAGGATAGGATAGGATAGCATAG 58.154 40.741 0.00 0.00 0.00 2.23
316 370 8.780377 AGGATAGGATAGGATAGGATAGCATA 57.220 38.462 0.00 0.00 0.00 3.14
317 371 7.677435 AGGATAGGATAGGATAGGATAGCAT 57.323 40.000 0.00 0.00 0.00 3.79
318 372 8.780377 ATAGGATAGGATAGGATAGGATAGCA 57.220 38.462 0.00 0.00 0.00 3.49
319 373 8.279361 GGATAGGATAGGATAGGATAGGATAGC 58.721 44.444 0.00 0.00 0.00 2.97
320 374 9.357921 TGGATAGGATAGGATAGGATAGGATAG 57.642 40.741 0.00 0.00 0.00 2.08
321 375 9.897451 ATGGATAGGATAGGATAGGATAGGATA 57.103 37.037 0.00 0.00 0.00 2.59
322 376 8.631906 CATGGATAGGATAGGATAGGATAGGAT 58.368 40.741 0.00 0.00 0.00 3.24
323 377 7.020066 CCATGGATAGGATAGGATAGGATAGGA 59.980 44.444 5.56 0.00 0.00 2.94
324 378 7.188381 CCATGGATAGGATAGGATAGGATAGG 58.812 46.154 5.56 0.00 0.00 2.57
325 379 7.774713 ACCATGGATAGGATAGGATAGGATAG 58.225 42.308 21.47 0.00 0.00 2.08
326 380 7.745294 ACCATGGATAGGATAGGATAGGATA 57.255 40.000 21.47 0.00 0.00 2.59
327 381 6.636341 ACCATGGATAGGATAGGATAGGAT 57.364 41.667 21.47 0.00 0.00 3.24
328 382 6.009840 TCAACCATGGATAGGATAGGATAGGA 60.010 42.308 21.47 0.00 0.00 2.94
329 383 6.205298 TCAACCATGGATAGGATAGGATAGG 58.795 44.000 21.47 0.00 0.00 2.57
330 384 7.688820 GCATCAACCATGGATAGGATAGGATAG 60.689 44.444 21.47 3.95 32.37 2.08
331 385 6.100279 GCATCAACCATGGATAGGATAGGATA 59.900 42.308 21.47 0.00 32.37 2.59
332 386 5.104193 GCATCAACCATGGATAGGATAGGAT 60.104 44.000 21.47 0.51 32.37 3.24
333 387 4.225942 GCATCAACCATGGATAGGATAGGA 59.774 45.833 21.47 0.00 32.37 2.94
334 388 4.019051 TGCATCAACCATGGATAGGATAGG 60.019 45.833 21.47 5.85 32.37 2.57
335 389 5.169992 TGCATCAACCATGGATAGGATAG 57.830 43.478 21.47 10.47 32.37 2.08
336 390 5.581350 TTGCATCAACCATGGATAGGATA 57.419 39.130 21.47 0.00 31.92 2.59
337 391 4.458256 TTGCATCAACCATGGATAGGAT 57.542 40.909 21.47 12.06 31.92 3.24
338 392 3.949586 TTGCATCAACCATGGATAGGA 57.050 42.857 21.47 10.18 31.92 2.94
339 393 5.771666 AGTAATTGCATCAACCATGGATAGG 59.228 40.000 21.47 5.89 31.92 2.57
340 394 6.889301 AGTAATTGCATCAACCATGGATAG 57.111 37.500 21.47 7.65 31.92 2.08
341 395 7.944000 ACATAGTAATTGCATCAACCATGGATA 59.056 33.333 21.47 3.01 31.92 2.59
342 396 6.779049 ACATAGTAATTGCATCAACCATGGAT 59.221 34.615 21.47 2.68 31.92 3.41
343 397 6.039605 CACATAGTAATTGCATCAACCATGGA 59.960 38.462 21.47 0.00 32.37 3.41
344 398 6.210796 CACATAGTAATTGCATCAACCATGG 58.789 40.000 11.19 11.19 32.37 3.66
345 399 5.688621 GCACATAGTAATTGCATCAACCATG 59.311 40.000 0.00 0.00 36.22 3.66
346 400 5.221303 GGCACATAGTAATTGCATCAACCAT 60.221 40.000 8.24 0.00 38.04 3.55
347 401 4.097741 GGCACATAGTAATTGCATCAACCA 59.902 41.667 8.24 0.00 38.04 3.67
348 402 4.097741 TGGCACATAGTAATTGCATCAACC 59.902 41.667 8.24 0.00 38.04 3.77
349 403 5.247507 TGGCACATAGTAATTGCATCAAC 57.752 39.130 8.24 0.00 38.04 3.18
390 444 2.015726 GAGGGAGGGAGGGAGGAGA 61.016 68.421 0.00 0.00 0.00 3.71
391 445 2.612251 GAGGGAGGGAGGGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
393 447 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
394 448 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
395 449 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
396 450 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
408 462 1.689582 GGTACACAGGGAGGGAGGG 60.690 68.421 0.00 0.00 0.00 4.30
409 463 0.635009 TAGGTACACAGGGAGGGAGG 59.365 60.000 0.00 0.00 0.00 4.30
410 464 2.178106 AGATAGGTACACAGGGAGGGAG 59.822 54.545 0.00 0.00 0.00 4.30
417 471 8.788806 CAAAGAGTAGATAGATAGGTACACAGG 58.211 40.741 0.00 0.00 0.00 4.00
418 472 8.788806 CCAAAGAGTAGATAGATAGGTACACAG 58.211 40.741 0.00 0.00 0.00 3.66
420 474 8.694581 ACCAAAGAGTAGATAGATAGGTACAC 57.305 38.462 0.00 0.00 0.00 2.90
425 479 8.024145 ACCAAACCAAAGAGTAGATAGATAGG 57.976 38.462 0.00 0.00 0.00 2.57
437 491 3.808728 TGACTCTGACCAAACCAAAGAG 58.191 45.455 0.00 0.00 40.19 2.85
438 492 3.454447 TCTGACTCTGACCAAACCAAAGA 59.546 43.478 0.00 0.00 0.00 2.52
439 493 3.808728 TCTGACTCTGACCAAACCAAAG 58.191 45.455 0.00 0.00 0.00 2.77
449 518 6.650807 TCAAACAAACCATATCTGACTCTGAC 59.349 38.462 0.00 0.00 0.00 3.51
451 520 7.335171 TCATCAAACAAACCATATCTGACTCTG 59.665 37.037 0.00 0.00 0.00 3.35
459 528 5.200483 TCCCCTCATCAAACAAACCATATC 58.800 41.667 0.00 0.00 0.00 1.63
461 530 4.569653 CCTCCCCTCATCAAACAAACCATA 60.570 45.833 0.00 0.00 0.00 2.74
465 534 2.171003 CCCTCCCCTCATCAAACAAAC 58.829 52.381 0.00 0.00 0.00 2.93
467 536 0.704076 CCCCTCCCCTCATCAAACAA 59.296 55.000 0.00 0.00 0.00 2.83
468 537 0.178846 TCCCCTCCCCTCATCAAACA 60.179 55.000 0.00 0.00 0.00 2.83
469 538 0.548510 CTCCCCTCCCCTCATCAAAC 59.451 60.000 0.00 0.00 0.00 2.93
470 539 0.624500 CCTCCCCTCCCCTCATCAAA 60.625 60.000 0.00 0.00 0.00 2.69
471 540 1.004758 CCTCCCCTCCCCTCATCAA 59.995 63.158 0.00 0.00 0.00 2.57
472 541 2.705410 CCTCCCCTCCCCTCATCA 59.295 66.667 0.00 0.00 0.00 3.07
473 542 2.122189 CCCTCCCCTCCCCTCATC 60.122 72.222 0.00 0.00 0.00 2.92
474 543 3.795924 CCCCTCCCCTCCCCTCAT 61.796 72.222 0.00 0.00 0.00 2.90
476 545 2.993038 GAATCCCCTCCCCTCCCCTC 62.993 70.000 0.00 0.00 0.00 4.30
477 546 2.973034 AATCCCCTCCCCTCCCCT 60.973 66.667 0.00 0.00 0.00 4.79
478 547 2.450699 GAATCCCCTCCCCTCCCC 60.451 72.222 0.00 0.00 0.00 4.81
479 548 0.196118 TATGAATCCCCTCCCCTCCC 59.804 60.000 0.00 0.00 0.00 4.30
480 549 1.363246 GTATGAATCCCCTCCCCTCC 58.637 60.000 0.00 0.00 0.00 4.30
503 572 6.000840 AGGGAAAGAAGCAAAAAGACTAGAG 58.999 40.000 0.00 0.00 0.00 2.43
507 576 4.281657 ACAGGGAAAGAAGCAAAAAGACT 58.718 39.130 0.00 0.00 0.00 3.24
508 577 4.655762 ACAGGGAAAGAAGCAAAAAGAC 57.344 40.909 0.00 0.00 0.00 3.01
509 578 5.422012 AGAAACAGGGAAAGAAGCAAAAAGA 59.578 36.000 0.00 0.00 0.00 2.52
510 579 5.664457 AGAAACAGGGAAAGAAGCAAAAAG 58.336 37.500 0.00 0.00 0.00 2.27
511 580 5.675684 AGAAACAGGGAAAGAAGCAAAAA 57.324 34.783 0.00 0.00 0.00 1.94
516 585 4.137543 TCTCAAGAAACAGGGAAAGAAGC 58.862 43.478 0.00 0.00 0.00 3.86
517 586 5.615289 TCTCTCAAGAAACAGGGAAAGAAG 58.385 41.667 0.00 0.00 0.00 2.85
518 587 5.630415 TCTCTCAAGAAACAGGGAAAGAA 57.370 39.130 0.00 0.00 0.00 2.52
519 588 5.545723 AGATCTCTCAAGAAACAGGGAAAGA 59.454 40.000 0.00 0.00 34.49 2.52
520 589 5.803552 AGATCTCTCAAGAAACAGGGAAAG 58.196 41.667 0.00 0.00 34.49 2.62
522 591 5.090139 AGAGATCTCTCAAGAAACAGGGAA 58.910 41.667 19.92 0.00 45.21 3.97
537 606 4.989279 AGCAAACAGAGAGAGAGATCTC 57.011 45.455 15.29 15.29 45.10 2.75
538 607 4.771577 TCAAGCAAACAGAGAGAGAGATCT 59.228 41.667 0.00 0.00 0.00 2.75
539 608 5.070770 TCAAGCAAACAGAGAGAGAGATC 57.929 43.478 0.00 0.00 0.00 2.75
540 609 5.680594 ATCAAGCAAACAGAGAGAGAGAT 57.319 39.130 0.00 0.00 0.00 2.75
541 610 6.788598 ATATCAAGCAAACAGAGAGAGAGA 57.211 37.500 0.00 0.00 0.00 3.10
543 612 9.973450 GTATTATATCAAGCAAACAGAGAGAGA 57.027 33.333 0.00 0.00 0.00 3.10
580 691 5.631119 TGAAAGAAAAGGGAAAGTAGGGAG 58.369 41.667 0.00 0.00 0.00 4.30
586 697 5.600069 AGAAGCATGAAAGAAAAGGGAAAGT 59.400 36.000 0.00 0.00 0.00 2.66
593 704 5.629849 CAGAAGCAGAAGCATGAAAGAAAAG 59.370 40.000 0.00 0.00 45.49 2.27
602 713 2.085320 AGAAGCAGAAGCAGAAGCATG 58.915 47.619 0.00 0.00 45.49 4.06
603 714 2.085320 CAGAAGCAGAAGCAGAAGCAT 58.915 47.619 0.00 0.00 45.49 3.79
607 718 1.878088 CAAGCAGAAGCAGAAGCAGAA 59.122 47.619 0.00 0.00 45.49 3.02
609 720 0.109689 GCAAGCAGAAGCAGAAGCAG 60.110 55.000 0.00 0.00 45.49 4.24
610 721 1.521450 GGCAAGCAGAAGCAGAAGCA 61.521 55.000 0.00 0.00 45.49 3.91
611 722 1.212229 GGCAAGCAGAAGCAGAAGC 59.788 57.895 0.00 0.00 45.49 3.86
613 724 0.179009 ACAGGCAAGCAGAAGCAGAA 60.179 50.000 0.00 0.00 45.49 3.02
619 746 1.051008 TGAGAGACAGGCAAGCAGAA 58.949 50.000 0.00 0.00 0.00 3.02
640 767 6.172136 AGGGAGATGATCATGTGAGTAAAG 57.828 41.667 14.30 0.00 0.00 1.85
647 774 1.350351 GGGGAGGGAGATGATCATGTG 59.650 57.143 14.30 0.00 0.00 3.21
655 782 1.053264 CAGAGGTGGGGAGGGAGATG 61.053 65.000 0.00 0.00 0.00 2.90
691 869 9.286946 CATTACAGAGAAGAGCAATTTCATTTC 57.713 33.333 0.00 0.00 0.00 2.17
697 875 9.842775 TCATATCATTACAGAGAAGAGCAATTT 57.157 29.630 0.00 0.00 0.00 1.82
699 877 9.438228 CATCATATCATTACAGAGAAGAGCAAT 57.562 33.333 0.00 0.00 0.00 3.56
700 878 8.645110 TCATCATATCATTACAGAGAAGAGCAA 58.355 33.333 0.00 0.00 0.00 3.91
701 879 8.186709 TCATCATATCATTACAGAGAAGAGCA 57.813 34.615 0.00 0.00 0.00 4.26
702 880 9.089601 CATCATCATATCATTACAGAGAAGAGC 57.910 37.037 0.00 0.00 0.00 4.09
716 894 8.769359 AGGAAGAGCAATATCATCATCATATCA 58.231 33.333 0.00 0.00 0.00 2.15
743 921 7.873505 GGAAGAGGAGTGACCATACATAAATAC 59.126 40.741 0.00 0.00 42.04 1.89
744 922 7.789831 AGGAAGAGGAGTGACCATACATAAATA 59.210 37.037 0.00 0.00 42.04 1.40
756 950 2.364002 GGCTATGAGGAAGAGGAGTGAC 59.636 54.545 0.00 0.00 0.00 3.67
763 957 1.751351 TGACACGGCTATGAGGAAGAG 59.249 52.381 0.00 0.00 0.00 2.85
764 958 1.847328 TGACACGGCTATGAGGAAGA 58.153 50.000 0.00 0.00 0.00 2.87
765 959 2.898729 ATGACACGGCTATGAGGAAG 57.101 50.000 0.00 0.00 0.00 3.46
766 960 2.364324 GGTATGACACGGCTATGAGGAA 59.636 50.000 0.00 0.00 0.00 3.36
767 961 1.961394 GGTATGACACGGCTATGAGGA 59.039 52.381 0.00 0.00 0.00 3.71
768 962 1.000955 GGGTATGACACGGCTATGAGG 59.999 57.143 0.00 0.00 0.00 3.86
769 963 1.964223 AGGGTATGACACGGCTATGAG 59.036 52.381 0.00 0.00 0.00 2.90
778 972 9.614792 AAGTGATTTAATTAGAGGGTATGACAC 57.385 33.333 0.00 0.00 0.00 3.67
804 1002 4.928601 AGCATAACTATTGCGTCGACTAA 58.071 39.130 14.70 9.18 44.82 2.24
809 1007 4.778842 AGAAAGCATAACTATTGCGTCG 57.221 40.909 0.00 0.00 44.82 5.12
812 1010 6.467047 CAGTGAAAGAAAGCATAACTATTGCG 59.533 38.462 0.00 0.00 44.82 4.85
820 1018 5.299028 TGACAAGCAGTGAAAGAAAGCATAA 59.701 36.000 0.00 0.00 0.00 1.90
821 1019 4.821260 TGACAAGCAGTGAAAGAAAGCATA 59.179 37.500 0.00 0.00 0.00 3.14
839 1041 1.003839 GCCCACTCATCCGTGACAA 60.004 57.895 0.00 0.00 37.06 3.18
840 1042 2.171209 CTGCCCACTCATCCGTGACA 62.171 60.000 0.00 0.00 37.06 3.58
872 1078 1.550524 CACAGCAGCTAGTAGGGTGAA 59.449 52.381 11.19 0.00 36.91 3.18
873 1079 1.186200 CACAGCAGCTAGTAGGGTGA 58.814 55.000 11.19 0.00 36.91 4.02
874 1080 0.898320 ACACAGCAGCTAGTAGGGTG 59.102 55.000 0.00 0.01 37.71 4.61
875 1081 0.898320 CACACAGCAGCTAGTAGGGT 59.102 55.000 0.00 0.00 0.00 4.34
876 1082 1.186200 TCACACAGCAGCTAGTAGGG 58.814 55.000 0.00 0.00 0.00 3.53
883 1089 0.536687 AGTTGCATCACACAGCAGCT 60.537 50.000 0.00 0.00 45.54 4.24
890 1096 0.512952 GTCGGTCAGTTGCATCACAC 59.487 55.000 0.00 0.00 0.00 3.82
892 1098 0.792640 CAGTCGGTCAGTTGCATCAC 59.207 55.000 0.00 0.00 0.00 3.06
894 1100 1.071605 GACAGTCGGTCAGTTGCATC 58.928 55.000 0.00 0.00 46.19 3.91
906 1112 5.501413 GCATCACATGAACATAAGACAGTCG 60.501 44.000 0.00 0.00 0.00 4.18
911 1117 5.808042 ACAGCATCACATGAACATAAGAC 57.192 39.130 0.00 0.00 0.00 3.01
921 1212 5.506815 GGTGGATAATCAACAGCATCACATG 60.507 44.000 0.00 0.00 33.18 3.21
931 1222 5.882000 CAGACAGAATGGTGGATAATCAACA 59.118 40.000 0.00 0.00 43.62 3.33
934 1225 5.698741 ACAGACAGAATGGTGGATAATCA 57.301 39.130 0.00 0.00 43.62 2.57
980 1271 1.004277 TGCCCACAGAACCTGGTTATC 59.996 52.381 12.96 0.61 35.51 1.75
998 1289 1.392853 CTTTCTCGCTGTCAGACATGC 59.607 52.381 2.97 9.06 0.00 4.06
1020 1311 1.821061 CTTCGACCTCCACTGGCACT 61.821 60.000 0.00 0.00 0.00 4.40
1110 1404 0.617249 CCTCTGCTCCTCCTTCTGGT 60.617 60.000 0.00 0.00 34.23 4.00
1121 1415 4.173924 GCCTCCTGCCCTCTGCTC 62.174 72.222 0.00 0.00 42.00 4.26
1293 1590 0.249120 CATCGTAGCCTCCACCAACA 59.751 55.000 0.00 0.00 0.00 3.33
1296 1593 0.752658 CATCATCGTAGCCTCCACCA 59.247 55.000 0.00 0.00 0.00 4.17
1326 1623 3.021695 CCCCTCGTCATAGTACTTGACA 58.978 50.000 24.81 16.38 42.90 3.58
1364 1661 2.074576 CCATCATCATCTCGGCATCAC 58.925 52.381 0.00 0.00 0.00 3.06
1407 1704 2.507102 CCGCGTGCGTCATCTTCT 60.507 61.111 13.70 0.00 37.81 2.85
1408 1705 1.074319 TAACCGCGTGCGTCATCTTC 61.074 55.000 13.70 0.00 37.81 2.87
1418 1715 1.286354 ATGGACAACGTAACCGCGTG 61.286 55.000 4.92 0.00 45.00 5.34
1472 1772 2.203832 TGCTGTCCTGAGGAGGCA 60.204 61.111 20.41 20.41 39.57 4.75
1581 1884 2.804572 CGCACCCCAGAGATGATTAGTG 60.805 54.545 0.00 0.00 0.00 2.74
1711 2014 8.535335 TCAGAGTTGATAAGAAACAGATAGCTT 58.465 33.333 0.00 0.00 0.00 3.74
1722 2025 9.098355 CGGAACATAAATCAGAGTTGATAAGAA 57.902 33.333 0.00 0.00 43.20 2.52
1727 2030 6.986817 CCTACGGAACATAAATCAGAGTTGAT 59.013 38.462 0.00 0.00 45.92 2.57
1734 2037 5.424757 TCAACCCTACGGAACATAAATCAG 58.575 41.667 0.00 0.00 0.00 2.90
1740 2043 3.433343 TGACTCAACCCTACGGAACATA 58.567 45.455 0.00 0.00 0.00 2.29
1746 2049 3.641906 AGGATATTGACTCAACCCTACGG 59.358 47.826 7.20 0.00 0.00 4.02
1748 2051 6.739008 GCAGTAGGATATTGACTCAACCCTAC 60.739 46.154 23.56 23.56 42.85 3.18
1751 2054 4.141711 TGCAGTAGGATATTGACTCAACCC 60.142 45.833 0.00 0.00 28.42 4.11
1767 2077 4.394300 CCTCTTTTCCACAGAATGCAGTAG 59.606 45.833 0.00 0.00 42.53 2.57
1768 2078 4.202461 ACCTCTTTTCCACAGAATGCAGTA 60.202 41.667 0.00 0.00 42.53 2.74
1769 2079 3.152341 CCTCTTTTCCACAGAATGCAGT 58.848 45.455 0.00 0.00 42.53 4.40
1770 2080 3.057736 CACCTCTTTTCCACAGAATGCAG 60.058 47.826 0.00 0.00 42.53 4.41
1771 2081 2.886523 CACCTCTTTTCCACAGAATGCA 59.113 45.455 0.00 0.00 42.53 3.96
1772 2082 2.352127 GCACCTCTTTTCCACAGAATGC 60.352 50.000 0.00 0.00 42.53 3.56
1773 2083 2.886523 TGCACCTCTTTTCCACAGAATG 59.113 45.455 0.00 0.00 46.00 2.67
1776 2086 1.815408 GCTGCACCTCTTTTCCACAGA 60.815 52.381 0.00 0.00 0.00 3.41
1777 2087 0.595095 GCTGCACCTCTTTTCCACAG 59.405 55.000 0.00 0.00 0.00 3.66
1779 2089 1.959848 GGCTGCACCTCTTTTCCAC 59.040 57.895 0.50 0.00 34.51 4.02
1789 2099 0.746204 GGAAAGAGCTAGGCTGCACC 60.746 60.000 0.50 0.00 39.88 5.01
1790 2100 0.036010 TGGAAAGAGCTAGGCTGCAC 60.036 55.000 0.50 0.00 39.88 4.57
1796 2106 6.240894 TGCCAAATATATGGAAAGAGCTAGG 58.759 40.000 0.00 0.00 43.54 3.02
1809 2119 9.056005 CAACTGTATGTACACTGCCAAATATAT 57.944 33.333 0.00 0.00 31.93 0.86
1810 2120 8.044309 ACAACTGTATGTACACTGCCAAATATA 58.956 33.333 0.00 0.00 31.93 0.86
1811 2121 6.884295 ACAACTGTATGTACACTGCCAAATAT 59.116 34.615 0.00 0.00 31.93 1.28
1817 2127 4.062293 TCAACAACTGTATGTACACTGCC 58.938 43.478 0.00 0.00 32.02 4.85
1841 2152 6.110033 ACACGCACATTACTGACCATAAATA 58.890 36.000 0.00 0.00 0.00 1.40
1842 2153 4.941263 ACACGCACATTACTGACCATAAAT 59.059 37.500 0.00 0.00 0.00 1.40
1843 2154 4.320023 ACACGCACATTACTGACCATAAA 58.680 39.130 0.00 0.00 0.00 1.40
1844 2155 3.932822 ACACGCACATTACTGACCATAA 58.067 40.909 0.00 0.00 0.00 1.90
1875 2186 0.742281 GATGATGGTGCGCACAGAGT 60.742 55.000 38.60 22.12 0.00 3.24
1882 2193 2.541762 GAGAGTAAAGATGATGGTGCGC 59.458 50.000 0.00 0.00 0.00 6.09
1883 2194 4.047822 GAGAGAGTAAAGATGATGGTGCG 58.952 47.826 0.00 0.00 0.00 5.34
1884 2195 4.100808 AGGAGAGAGTAAAGATGATGGTGC 59.899 45.833 0.00 0.00 0.00 5.01
1885 2196 5.867903 AGGAGAGAGTAAAGATGATGGTG 57.132 43.478 0.00 0.00 0.00 4.17
1886 2197 6.041523 GCTAAGGAGAGAGTAAAGATGATGGT 59.958 42.308 0.00 0.00 0.00 3.55
1887 2198 6.041409 TGCTAAGGAGAGAGTAAAGATGATGG 59.959 42.308 0.00 0.00 0.00 3.51
1888 2199 7.048629 TGCTAAGGAGAGAGTAAAGATGATG 57.951 40.000 0.00 0.00 0.00 3.07
1889 2200 7.669427 CATGCTAAGGAGAGAGTAAAGATGAT 58.331 38.462 0.00 0.00 0.00 2.45
1890 2201 6.462207 GCATGCTAAGGAGAGAGTAAAGATGA 60.462 42.308 11.37 0.00 0.00 2.92
1891 2202 5.695816 GCATGCTAAGGAGAGAGTAAAGATG 59.304 44.000 11.37 0.00 0.00 2.90
1892 2203 5.508825 CGCATGCTAAGGAGAGAGTAAAGAT 60.509 44.000 17.13 0.00 0.00 2.40
1893 2204 4.202060 CGCATGCTAAGGAGAGAGTAAAGA 60.202 45.833 17.13 0.00 0.00 2.52
1910 2221 1.351012 CACTAAGCTGAGCGCATGC 59.649 57.895 11.47 7.91 42.61 4.06
1911 2222 1.081892 AACACTAAGCTGAGCGCATG 58.918 50.000 11.47 0.00 42.61 4.06
1912 2223 1.734465 GAAACACTAAGCTGAGCGCAT 59.266 47.619 11.47 0.00 42.61 4.73
1913 2224 1.148310 GAAACACTAAGCTGAGCGCA 58.852 50.000 11.47 0.00 42.61 6.09
1914 2225 1.433534 AGAAACACTAAGCTGAGCGC 58.566 50.000 0.00 0.00 39.57 5.92
1915 2226 3.494626 TGAAAGAAACACTAAGCTGAGCG 59.505 43.478 0.00 0.00 0.00 5.03
1916 2227 4.612486 GCTGAAAGAAACACTAAGCTGAGC 60.612 45.833 0.00 0.00 34.07 4.26
1946 2268 4.525912 ACTGCACAAAATGGATTTCTCC 57.474 40.909 0.00 0.00 42.45 3.71
1993 2315 2.128771 TTTCAGGCCCATAACTGAGC 57.871 50.000 0.00 0.00 43.84 4.26
1998 2320 5.976458 TCAATGATTTTTCAGGCCCATAAC 58.024 37.500 0.00 0.00 0.00 1.89
2004 2326 4.498241 GGAGTTCAATGATTTTTCAGGCC 58.502 43.478 0.00 0.00 0.00 5.19
2014 2336 4.289672 AGGTGTAACAGGGAGTTCAATGAT 59.710 41.667 0.00 0.00 41.64 2.45
2045 2395 0.787787 TGCGCGTGATGTTCTAACAC 59.212 50.000 8.43 0.00 42.51 3.32
2082 2432 9.128107 CAAAGAAAATAAATCAACGCACATACT 57.872 29.630 0.00 0.00 0.00 2.12
2099 2449 8.638873 CCCCACTAACTTCTTAACAAAGAAAAT 58.361 33.333 2.53 0.00 38.23 1.82
2113 2463 4.995487 CAGAAACTACACCCCACTAACTTC 59.005 45.833 0.00 0.00 0.00 3.01
2148 2498 6.553953 TTAACCATGCCACACTATCTCTAA 57.446 37.500 0.00 0.00 0.00 2.10
2149 2499 6.553953 TTTAACCATGCCACACTATCTCTA 57.446 37.500 0.00 0.00 0.00 2.43
2153 2503 6.862209 TCAATTTTAACCATGCCACACTATC 58.138 36.000 0.00 0.00 0.00 2.08
2157 2507 3.679502 GCTCAATTTTAACCATGCCACAC 59.320 43.478 0.00 0.00 0.00 3.82
2160 2510 3.577848 ACTGCTCAATTTTAACCATGCCA 59.422 39.130 0.00 0.00 0.00 4.92
2212 2562 6.481313 ACCAACATGATATCTCACGATTTCAG 59.519 38.462 0.00 0.00 39.73 3.02
2263 2613 3.548818 GCAAAATCAGTGACTGGTGTGTC 60.549 47.826 13.33 1.47 37.47 3.67
2264 2614 2.358898 GCAAAATCAGTGACTGGTGTGT 59.641 45.455 13.33 0.00 31.51 3.72
2300 2650 6.978659 TCAGTATTTAGCAGTGTACATACAGC 59.021 38.462 0.00 1.15 36.78 4.40
2411 2761 6.034256 GCCAAAGTGAAATCTGAATCAAATCG 59.966 38.462 0.00 0.00 0.00 3.34
2523 2878 1.485397 CATACTGCTAGCACTGCTCG 58.515 55.000 14.93 5.51 40.44 5.03
2531 2886 0.179000 ACACCAGGCATACTGCTAGC 59.821 55.000 8.10 8.10 46.14 3.42
2551 2906 2.360801 GAGGAGAGTCTACTGATGGCAC 59.639 54.545 10.46 0.00 0.00 5.01
2552 2907 2.024941 TGAGGAGAGTCTACTGATGGCA 60.025 50.000 10.46 0.00 0.00 4.92
2553 2908 2.622942 CTGAGGAGAGTCTACTGATGGC 59.377 54.545 10.46 0.00 0.00 4.40
2554 2909 2.622942 GCTGAGGAGAGTCTACTGATGG 59.377 54.545 10.46 0.00 0.00 3.51
2555 2910 3.286353 TGCTGAGGAGAGTCTACTGATG 58.714 50.000 10.46 0.50 0.00 3.07
2556 2911 3.660970 TGCTGAGGAGAGTCTACTGAT 57.339 47.619 10.46 0.00 0.00 2.90
2557 2912 3.286353 CATGCTGAGGAGAGTCTACTGA 58.714 50.000 10.46 0.00 0.00 3.41
2558 2913 3.023119 ACATGCTGAGGAGAGTCTACTG 58.977 50.000 10.46 0.00 0.00 2.74
2559 2914 3.023119 CACATGCTGAGGAGAGTCTACT 58.977 50.000 3.92 3.92 0.00 2.57
2560 2915 2.757868 ACACATGCTGAGGAGAGTCTAC 59.242 50.000 0.00 0.00 0.00 2.59
2561 2916 3.093057 ACACATGCTGAGGAGAGTCTA 57.907 47.619 0.00 0.00 0.00 2.59
2562 2917 1.935799 ACACATGCTGAGGAGAGTCT 58.064 50.000 0.00 0.00 0.00 3.24
2563 2918 2.028658 TGAACACATGCTGAGGAGAGTC 60.029 50.000 0.00 0.00 0.00 3.36
2564 2919 1.973515 TGAACACATGCTGAGGAGAGT 59.026 47.619 0.00 0.00 0.00 3.24
2565 2920 2.233186 TCTGAACACATGCTGAGGAGAG 59.767 50.000 0.00 0.00 0.00 3.20
2566 2921 2.250924 TCTGAACACATGCTGAGGAGA 58.749 47.619 0.00 0.00 0.00 3.71
2567 2922 2.756840 TCTGAACACATGCTGAGGAG 57.243 50.000 0.00 0.00 0.00 3.69
2568 2923 3.340928 CAATCTGAACACATGCTGAGGA 58.659 45.455 0.00 0.00 0.00 3.71
2569 2924 2.422479 CCAATCTGAACACATGCTGAGG 59.578 50.000 0.00 0.00 0.00 3.86
2570 2925 2.159421 GCCAATCTGAACACATGCTGAG 60.159 50.000 0.00 0.00 0.00 3.35
2571 2926 1.814394 GCCAATCTGAACACATGCTGA 59.186 47.619 0.00 0.00 0.00 4.26
2572 2927 1.135199 GGCCAATCTGAACACATGCTG 60.135 52.381 0.00 0.00 0.00 4.41
2573 2928 1.180029 GGCCAATCTGAACACATGCT 58.820 50.000 0.00 0.00 0.00 3.79
2574 2929 1.180029 AGGCCAATCTGAACACATGC 58.820 50.000 5.01 0.00 0.00 4.06
2575 2930 3.877559 TCTAGGCCAATCTGAACACATG 58.122 45.455 5.01 0.00 0.00 3.21
2576 2931 4.574674 TTCTAGGCCAATCTGAACACAT 57.425 40.909 5.01 0.00 0.00 3.21
2577 2932 4.574674 ATTCTAGGCCAATCTGAACACA 57.425 40.909 5.01 0.00 0.00 3.72
2578 2933 5.904362 AAATTCTAGGCCAATCTGAACAC 57.096 39.130 5.01 0.00 0.00 3.32
2579 2934 6.248433 AGAAAATTCTAGGCCAATCTGAACA 58.752 36.000 5.01 0.00 35.34 3.18
2580 2935 6.765915 AGAAAATTCTAGGCCAATCTGAAC 57.234 37.500 5.01 0.00 35.34 3.18
2581 2936 7.451255 TCAAAGAAAATTCTAGGCCAATCTGAA 59.549 33.333 5.01 1.75 36.28 3.02
2582 2937 6.947733 TCAAAGAAAATTCTAGGCCAATCTGA 59.052 34.615 5.01 0.00 36.28 3.27
2583 2938 7.031975 GTCAAAGAAAATTCTAGGCCAATCTG 58.968 38.462 5.01 0.00 36.28 2.90
2584 2939 6.127897 CGTCAAAGAAAATTCTAGGCCAATCT 60.128 38.462 5.01 0.00 36.28 2.40
2585 2940 6.030228 CGTCAAAGAAAATTCTAGGCCAATC 58.970 40.000 5.01 0.00 36.28 2.67
2586 2941 5.622233 GCGTCAAAGAAAATTCTAGGCCAAT 60.622 40.000 5.01 0.00 36.28 3.16
2587 2942 4.320935 GCGTCAAAGAAAATTCTAGGCCAA 60.321 41.667 5.01 0.00 36.28 4.52
2588 2943 3.190535 GCGTCAAAGAAAATTCTAGGCCA 59.809 43.478 5.01 0.00 36.28 5.36
2589 2944 3.440522 AGCGTCAAAGAAAATTCTAGGCC 59.559 43.478 0.00 0.00 36.28 5.19
2590 2945 4.686839 AGCGTCAAAGAAAATTCTAGGC 57.313 40.909 0.00 0.00 36.28 3.93
2591 2946 6.251549 GCTAAGCGTCAAAGAAAATTCTAGG 58.748 40.000 0.00 0.00 36.28 3.02
2609 2964 3.184541 TCGAAGGAACATTACGCTAAGC 58.815 45.455 0.00 0.00 0.00 3.09
2610 2965 3.243177 GCTCGAAGGAACATTACGCTAAG 59.757 47.826 0.00 0.00 0.00 2.18
2611 2966 3.184541 GCTCGAAGGAACATTACGCTAA 58.815 45.455 0.00 0.00 0.00 3.09
2612 2967 2.164827 TGCTCGAAGGAACATTACGCTA 59.835 45.455 0.00 0.00 0.00 4.26
2613 2968 1.067142 TGCTCGAAGGAACATTACGCT 60.067 47.619 0.00 0.00 0.00 5.07
2614 2969 1.060698 GTGCTCGAAGGAACATTACGC 59.939 52.381 0.00 0.00 0.00 4.42
2615 2970 2.607187 AGTGCTCGAAGGAACATTACG 58.393 47.619 0.00 0.00 0.00 3.18
2616 2971 4.745649 ACTAGTGCTCGAAGGAACATTAC 58.254 43.478 0.00 0.00 0.00 1.89
2617 2972 5.450137 GCTACTAGTGCTCGAAGGAACATTA 60.450 44.000 5.39 0.00 0.00 1.90
2618 2973 3.963428 ACTAGTGCTCGAAGGAACATT 57.037 42.857 0.00 0.00 0.00 2.71
2619 2974 3.181485 GCTACTAGTGCTCGAAGGAACAT 60.181 47.826 5.39 0.00 0.00 2.71
2620 2975 2.163815 GCTACTAGTGCTCGAAGGAACA 59.836 50.000 5.39 0.00 0.00 3.18
2621 2976 2.163815 TGCTACTAGTGCTCGAAGGAAC 59.836 50.000 5.39 0.00 0.00 3.62
2622 2977 2.443416 TGCTACTAGTGCTCGAAGGAA 58.557 47.619 5.39 0.00 0.00 3.36
2623 2978 2.124277 TGCTACTAGTGCTCGAAGGA 57.876 50.000 5.39 0.00 0.00 3.36
2624 2979 2.941453 TTGCTACTAGTGCTCGAAGG 57.059 50.000 5.39 0.00 0.00 3.46
2625 2980 5.786401 AATTTTGCTACTAGTGCTCGAAG 57.214 39.130 5.39 0.00 0.00 3.79
2634 2989 8.454106 ACTGCACAAGATAAATTTTGCTACTAG 58.546 33.333 10.65 3.80 0.00 2.57
2637 2992 8.964420 TTACTGCACAAGATAAATTTTGCTAC 57.036 30.769 10.65 0.00 0.00 3.58
2687 3042 3.706594 TCAGTCTTCAGGCCCATAACTAG 59.293 47.826 0.00 0.00 0.00 2.57
2688 3043 3.719871 TCAGTCTTCAGGCCCATAACTA 58.280 45.455 0.00 0.00 0.00 2.24
2692 3047 2.173356 CCAATCAGTCTTCAGGCCCATA 59.827 50.000 0.00 0.00 0.00 2.74
2697 3052 2.626840 GAGTCCAATCAGTCTTCAGGC 58.373 52.381 0.00 0.00 0.00 4.85
2705 3060 3.248024 TGTAACAGGGAGTCCAATCAGT 58.752 45.455 12.30 0.00 34.83 3.41
2706 3061 3.981071 TGTAACAGGGAGTCCAATCAG 57.019 47.619 12.30 0.00 34.83 2.90
2779 3134 6.479331 TCAAATTTAAACAAAAACTACGCCCC 59.521 34.615 0.00 0.00 0.00 5.80
2803 3158 4.256920 ACTTGCCACACAACATCTCTATC 58.743 43.478 0.00 0.00 33.68 2.08
2823 3178 4.381079 GCTGACTACTTGCTACTTGCTACT 60.381 45.833 0.00 0.00 43.37 2.57
2826 3181 2.354203 GGCTGACTACTTGCTACTTGCT 60.354 50.000 0.00 0.00 43.37 3.91
2827 3182 2.003301 GGCTGACTACTTGCTACTTGC 58.997 52.381 0.00 0.00 43.25 4.01
2828 3183 3.319137 TGGCTGACTACTTGCTACTTG 57.681 47.619 0.00 0.00 0.00 3.16
2831 3186 4.253685 TCATTTGGCTGACTACTTGCTAC 58.746 43.478 0.00 0.00 0.00 3.58
2833 3188 3.423539 TCATTTGGCTGACTACTTGCT 57.576 42.857 0.00 0.00 0.00 3.91
2834 3189 3.441572 ACATCATTTGGCTGACTACTTGC 59.558 43.478 0.00 0.00 0.00 4.01
2835 3190 5.048504 ACAACATCATTTGGCTGACTACTTG 60.049 40.000 0.00 0.00 0.00 3.16
2836 3191 5.048504 CACAACATCATTTGGCTGACTACTT 60.049 40.000 0.00 0.00 0.00 2.24
2842 3197 5.221481 ACAAATCACAACATCATTTGGCTGA 60.221 36.000 8.14 0.00 40.41 4.26
2843 3198 4.992319 ACAAATCACAACATCATTTGGCTG 59.008 37.500 8.14 0.00 40.41 4.85
2844 3199 4.992319 CACAAATCACAACATCATTTGGCT 59.008 37.500 8.14 0.00 40.41 4.75
2845 3200 4.989797 TCACAAATCACAACATCATTTGGC 59.010 37.500 8.14 0.00 40.41 4.52
2846 3201 6.448852 TCTCACAAATCACAACATCATTTGG 58.551 36.000 8.14 0.00 40.41 3.28
2848 3203 8.795513 TGTATCTCACAAATCACAACATCATTT 58.204 29.630 0.00 0.00 32.95 2.32
2849 3204 8.339344 TGTATCTCACAAATCACAACATCATT 57.661 30.769 0.00 0.00 32.95 2.57
2850 3205 7.414873 GCTGTATCTCACAAATCACAACATCAT 60.415 37.037 0.00 0.00 36.48 2.45
2851 3206 6.128200 GCTGTATCTCACAAATCACAACATCA 60.128 38.462 0.00 0.00 36.48 3.07
2852 3207 6.093219 AGCTGTATCTCACAAATCACAACATC 59.907 38.462 0.00 0.00 36.48 3.06
2853 3208 5.942236 AGCTGTATCTCACAAATCACAACAT 59.058 36.000 0.00 0.00 36.48 2.71
2914 3297 2.585330 TGAAGCAAAATCAGTGGCTGA 58.415 42.857 1.06 1.06 44.99 4.26
2917 3300 4.328169 GCTAAATGAAGCAAAATCAGTGGC 59.672 41.667 0.00 0.00 42.30 5.01
3028 3412 8.000780 GGATCAAATCCTACTTTGCTGTAAAT 57.999 34.615 0.00 0.00 46.19 1.40
3070 3454 8.988934 TGATTGACTGTTTTGTAGTTCATACTC 58.011 33.333 0.00 0.00 35.78 2.59
3152 3555 6.071391 CCATACCAACTTCAAAAGGTAGCAAT 60.071 38.462 0.00 0.00 39.74 3.56
3362 3791 1.925847 CAAACGCAACAGCAAACATGT 59.074 42.857 0.00 0.00 0.00 3.21
3375 3804 5.950758 ATTCCACTGTAAATACAAACGCA 57.049 34.783 0.00 0.00 35.50 5.24
3376 3805 7.068692 AGTATTCCACTGTAAATACAAACGC 57.931 36.000 19.21 1.72 39.65 4.84
3406 3835 9.013229 ACTGCATACAAGTTCAGAAAATGATAA 57.987 29.630 3.94 0.00 37.89 1.75
3415 3844 4.607293 ACTGACTGCATACAAGTTCAGA 57.393 40.909 3.51 0.00 34.00 3.27
3418 3847 7.023575 CCAATTTACTGACTGCATACAAGTTC 58.976 38.462 0.00 0.00 0.00 3.01
3538 4065 5.189736 TGCTTCCCACATAGAAGACTTGTAT 59.810 40.000 4.75 0.00 42.80 2.29
3560 4097 2.766828 AGGACCTAGGTGAACTGTATGC 59.233 50.000 22.10 0.00 0.00 3.14
3655 4195 7.016153 AGAACCAAGGTAATGTACAAGATGA 57.984 36.000 0.00 0.00 0.00 2.92
3656 4196 7.174946 ACAAGAACCAAGGTAATGTACAAGATG 59.825 37.037 0.00 0.00 0.00 2.90
3657 4197 7.174946 CACAAGAACCAAGGTAATGTACAAGAT 59.825 37.037 0.00 0.00 0.00 2.40
3658 4198 6.485313 CACAAGAACCAAGGTAATGTACAAGA 59.515 38.462 0.00 0.00 0.00 3.02
3659 4199 6.262273 ACACAAGAACCAAGGTAATGTACAAG 59.738 38.462 0.00 0.00 0.00 3.16
3660 4200 6.123651 ACACAAGAACCAAGGTAATGTACAA 58.876 36.000 0.00 0.00 0.00 2.41
3661 4201 5.686753 ACACAAGAACCAAGGTAATGTACA 58.313 37.500 0.00 0.00 0.00 2.90
3665 4205 6.391227 AGAAACACAAGAACCAAGGTAATG 57.609 37.500 0.00 0.00 0.00 1.90
3675 4215 9.582223 GCGCTAATATAATAGAAACACAAGAAC 57.418 33.333 0.00 0.00 0.00 3.01
3681 4221 8.004344 CAGTGTGCGCTAATATAATAGAAACAC 58.996 37.037 9.73 9.35 35.03 3.32
3800 4367 2.938451 CAACTGACAACAGAACAGAGCA 59.062 45.455 0.00 0.00 46.03 4.26
3834 4402 1.151587 ACCACCAGTCCAGGGGATT 60.152 57.895 0.00 0.00 32.15 3.01
4062 4645 5.990386 TCGTATTAAACAGTGCAAAGGTACA 59.010 36.000 0.00 0.00 31.27 2.90
4155 4773 0.527565 AAGCATGGATTTCACCGCAC 59.472 50.000 0.00 0.00 31.56 5.34
4159 4777 4.996788 ATTCTCAAGCATGGATTTCACC 57.003 40.909 0.00 0.00 0.00 4.02
4172 4790 4.301072 TTCCCAGGTACCAATTCTCAAG 57.699 45.455 15.94 0.00 0.00 3.02
4174 4792 4.111577 AGATTCCCAGGTACCAATTCTCA 58.888 43.478 15.94 0.00 0.00 3.27
4175 4793 4.779993 AGATTCCCAGGTACCAATTCTC 57.220 45.455 15.94 3.60 0.00 2.87
4176 4794 6.848562 AATAGATTCCCAGGTACCAATTCT 57.151 37.500 15.94 9.43 0.00 2.40
4177 4795 7.684428 GCAAAATAGATTCCCAGGTACCAATTC 60.684 40.741 15.94 2.14 0.00 2.17
4178 4796 6.098266 GCAAAATAGATTCCCAGGTACCAATT 59.902 38.462 15.94 0.00 0.00 2.32
4179 4797 5.598417 GCAAAATAGATTCCCAGGTACCAAT 59.402 40.000 15.94 4.66 0.00 3.16
4180 4798 4.953579 GCAAAATAGATTCCCAGGTACCAA 59.046 41.667 15.94 0.00 0.00 3.67
4182 4800 4.793201 AGCAAAATAGATTCCCAGGTACC 58.207 43.478 2.73 2.73 0.00 3.34
4183 4801 6.775594 AAAGCAAAATAGATTCCCAGGTAC 57.224 37.500 0.00 0.00 0.00 3.34
4184 4802 6.723977 ACAAAAGCAAAATAGATTCCCAGGTA 59.276 34.615 0.00 0.00 0.00 3.08
4185 4803 5.543790 ACAAAAGCAAAATAGATTCCCAGGT 59.456 36.000 0.00 0.00 0.00 4.00
4186 4804 5.870978 CACAAAAGCAAAATAGATTCCCAGG 59.129 40.000 0.00 0.00 0.00 4.45
4194 4835 4.479158 AGGGGACACAAAAGCAAAATAGA 58.521 39.130 0.00 0.00 0.00 1.98
4212 4853 1.413118 AAAACACAGCTTTGGAGGGG 58.587 50.000 4.63 0.00 0.00 4.79
4260 4901 8.931775 GTGAACAAAGTGGTTAACAAAAGATTT 58.068 29.630 8.10 0.00 33.16 2.17
4261 4902 8.311109 AGTGAACAAAGTGGTTAACAAAAGATT 58.689 29.630 8.10 0.00 35.02 2.40
4262 4903 7.836842 AGTGAACAAAGTGGTTAACAAAAGAT 58.163 30.769 8.10 0.00 35.02 2.40
4264 4905 7.383843 ACAAGTGAACAAAGTGGTTAACAAAAG 59.616 33.333 8.10 0.00 35.02 2.27
4265 4906 7.210873 ACAAGTGAACAAAGTGGTTAACAAAA 58.789 30.769 8.10 0.00 35.02 2.44
4266 4907 6.750148 ACAAGTGAACAAAGTGGTTAACAAA 58.250 32.000 8.10 0.00 35.02 2.83
4267 4908 6.334102 ACAAGTGAACAAAGTGGTTAACAA 57.666 33.333 8.10 0.00 35.02 2.83
4269 4910 5.061684 GCAACAAGTGAACAAAGTGGTTAAC 59.938 40.000 0.00 0.00 33.10 2.01
4270 4911 5.047660 AGCAACAAGTGAACAAAGTGGTTAA 60.048 36.000 0.00 0.00 0.00 2.01
4271 4912 4.461081 AGCAACAAGTGAACAAAGTGGTTA 59.539 37.500 0.00 0.00 0.00 2.85
4272 4913 3.258123 AGCAACAAGTGAACAAAGTGGTT 59.742 39.130 0.00 0.00 0.00 3.67
4273 4914 2.825532 AGCAACAAGTGAACAAAGTGGT 59.174 40.909 0.00 0.00 0.00 4.16
4274 4915 3.508744 AGCAACAAGTGAACAAAGTGG 57.491 42.857 0.00 0.00 0.00 4.00
4275 4916 5.051508 GCATTAGCAACAAGTGAACAAAGTG 60.052 40.000 0.00 0.00 41.58 3.16
4276 4917 5.043248 GCATTAGCAACAAGTGAACAAAGT 58.957 37.500 0.00 0.00 41.58 2.66
4277 4918 5.565723 GCATTAGCAACAAGTGAACAAAG 57.434 39.130 0.00 0.00 41.58 2.77
4336 4978 5.918576 CAGATTTACGCGTGATAACTATCCA 59.081 40.000 24.59 0.00 31.71 3.41
4407 5050 5.823353 TCCCGAAACAAGACAAACAAATAC 58.177 37.500 0.00 0.00 0.00 1.89
4426 5069 4.904253 TTTGGTCTAACAGTTTTTCCCG 57.096 40.909 0.00 0.00 0.00 5.14
4428 5071 7.511959 AGAGATTTGGTCTAACAGTTTTTCC 57.488 36.000 0.00 0.00 37.29 3.13
4547 5194 3.055819 GCTCCAGTCTGTCATTTGGTAGA 60.056 47.826 0.00 0.00 32.51 2.59
4584 5231 8.328864 GTCAGTGAAAGTATATGGATTTTCGAC 58.671 37.037 0.00 0.00 33.40 4.20
4610 5257 2.988493 CTGGCATTGTTTGAATGTTCGG 59.012 45.455 0.00 0.00 0.00 4.30
4611 5258 3.641648 ACTGGCATTGTTTGAATGTTCG 58.358 40.909 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.