Multiple sequence alignment - TraesCS2B01G630100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G630100 chr2B 100.000 9070 0 0 1 9070 801225042 801215973 0.000000e+00 16750.0
1 TraesCS2B01G630100 chr2D 97.806 6473 119 14 1 6467 640208283 640214738 0.000000e+00 11145.0
2 TraesCS2B01G630100 chr2D 93.420 1307 65 12 7321 8617 640215316 640216611 0.000000e+00 1917.0
3 TraesCS2B01G630100 chr2D 91.277 470 34 4 6509 6976 640214749 640215213 1.280000e-177 634.0
4 TraesCS2B01G630100 chr2D 92.188 64 4 1 8615 8678 495046990 495046928 1.250000e-13 89.8
5 TraesCS2B01G630100 chr2D 83.158 95 11 4 8978 9070 448641082 448640991 2.100000e-11 82.4
6 TraesCS2B01G630100 chr2A 97.405 6474 121 18 1 6467 765702529 765708962 0.000000e+00 10981.0
7 TraesCS2B01G630100 chr2A 92.526 1338 73 12 7313 8635 765709550 765710875 0.000000e+00 1892.0
8 TraesCS2B01G630100 chr2A 89.721 574 42 10 6509 7072 765708973 765709539 0.000000e+00 717.0
9 TraesCS2B01G630100 chr2A 90.000 120 9 3 8952 9070 765711294 765711411 1.580000e-32 152.0
10 TraesCS2B01G630100 chr2A 92.647 68 4 1 8611 8678 765954623 765954689 7.500000e-16 97.1
11 TraesCS2B01G630100 chr2A 90.196 51 3 2 9019 9067 57177364 57177414 2.110000e-06 65.8
12 TraesCS2B01G630100 chr2A 79.412 102 11 6 8970 9069 80198520 80198613 7.600000e-06 63.9
13 TraesCS2B01G630100 chrUn 98.778 409 5 0 5532 5940 477867659 477868067 0.000000e+00 728.0
14 TraesCS2B01G630100 chr1B 95.652 69 2 1 8611 8679 24605013 24605080 9.630000e-20 110.0
15 TraesCS2B01G630100 chr1B 87.302 63 1 5 9004 9061 601248479 601248539 2.110000e-06 65.8
16 TraesCS2B01G630100 chr5D 76.744 215 28 14 7886 8085 52323518 52323311 5.790000e-17 100.0
17 TraesCS2B01G630100 chr1D 94.030 67 1 2 8615 8679 395983435 395983500 2.080000e-16 99.0
18 TraesCS2B01G630100 chr6B 93.846 65 2 2 8615 8678 49827699 49827762 7.500000e-16 97.1
19 TraesCS2B01G630100 chr6B 92.188 64 5 0 8615 8678 49827843 49827906 3.490000e-14 91.6
20 TraesCS2B01G630100 chr7B 85.714 84 6 3 8603 8681 713303707 713303789 5.840000e-12 84.2
21 TraesCS2B01G630100 chr5B 87.838 74 6 3 8606 8678 398836531 398836460 5.840000e-12 84.2
22 TraesCS2B01G630100 chr3D 86.567 67 8 1 8999 9065 2109410 2109345 1.260000e-08 73.1
23 TraesCS2B01G630100 chr1A 83.544 79 11 2 8994 9070 11932454 11932376 1.260000e-08 73.1
24 TraesCS2B01G630100 chr4B 82.895 76 12 1 8996 9070 608683705 608683630 5.880000e-07 67.6
25 TraesCS2B01G630100 chr6D 77.119 118 20 6 8957 9070 359008879 359008993 2.730000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G630100 chr2B 801215973 801225042 9069 True 16750.000000 16750 100.000000 1 9070 1 chr2B.!!$R1 9069
1 TraesCS2B01G630100 chr2D 640208283 640216611 8328 False 4565.333333 11145 94.167667 1 8617 3 chr2D.!!$F1 8616
2 TraesCS2B01G630100 chr2A 765702529 765711411 8882 False 3435.500000 10981 92.413000 1 9070 4 chr2A.!!$F4 9069

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
374 375 0.104120 TCTCGATGGCGTTGTATGGG 59.896 55.000 0.00 0.00 38.98 4.00 F
375 376 0.179084 CTCGATGGCGTTGTATGGGT 60.179 55.000 0.00 0.00 38.98 4.51 F
1451 1455 0.937304 ATGCCGTTGTATTAGCTGCG 59.063 50.000 0.00 0.00 0.00 5.18 F
2930 2939 0.968405 ACAGCCGCAAATTGATGGTT 59.032 45.000 0.00 0.00 0.00 3.67 F
3782 3791 2.982470 CTCTTGCCTTGTTTCGAAATGC 59.018 45.455 14.69 14.29 0.00 3.56 F
3971 3982 0.179018 GGAGTGAGTGGCAACCAAGT 60.179 55.000 0.00 0.00 34.18 3.16 F
5553 5564 1.005037 AACTTCGGAGCGCATGACA 60.005 52.632 11.47 0.00 0.00 3.58 F
5658 5669 1.077265 CCACCCTCATGTTTGCCCT 59.923 57.895 0.00 0.00 0.00 5.19 F
6675 6686 0.107410 ACAGCCGACACAAGTCCAAA 60.107 50.000 0.00 0.00 41.87 3.28 F
7126 7147 0.251341 AAGCCACATCACCAGGAACC 60.251 55.000 0.00 0.00 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1538 1546 0.369931 CGACACACACACACACACAG 59.630 55.000 0.00 0.00 0.00 3.66 R
1991 1999 1.153568 GCATGCCGACAGAGCAGTA 60.154 57.895 6.36 0.00 44.90 2.74 R
3232 3241 0.324183 TCCTGTCCCTGCTCTCTGAG 60.324 60.000 0.00 0.00 0.00 3.35 R
3889 3898 1.132003 TGAGGGGGAAAGGGAAAGGTA 60.132 52.381 0.00 0.00 0.00 3.08 R
5640 5651 1.077265 AGGGCAAACATGAGGGTGG 59.923 57.895 0.00 0.00 0.00 4.61 R
5658 5669 1.685355 TAATGCTGCGGCTAGGCTCA 61.685 55.000 20.27 11.91 39.59 4.26 R
6435 6446 0.036199 GGGCAAAAATGCATGCTCCA 60.036 50.000 20.33 0.00 42.20 3.86 R
7107 7128 0.251341 GGTTCCTGGTGATGTGGCTT 60.251 55.000 0.00 0.00 0.00 4.35 R
7868 7889 0.109458 CGTCACCGCTGCTGTTACTA 60.109 55.000 6.89 0.00 0.00 1.82 R
8716 8859 0.179121 TTCACGAATATGCCTCGCGT 60.179 50.000 5.77 0.00 39.97 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.750712 TGCATTTTCGGTTAGCTTACCC 59.249 45.455 16.02 1.06 34.56 3.69
79 80 2.495155 TTTTCGGTTAGCTTACCCCC 57.505 50.000 16.02 0.00 34.56 5.40
120 121 0.318022 TGCATGCACACTCTTTTGCG 60.318 50.000 18.46 0.00 41.96 4.85
135 136 4.627900 TCTTTTGCGTTGCGATCATACTTA 59.372 37.500 0.00 0.00 0.00 2.24
277 278 1.202734 AGATGGTGAAGCATCGGATGG 60.203 52.381 18.96 2.05 33.37 3.51
279 280 0.617935 TGGTGAAGCATCGGATGGAA 59.382 50.000 18.96 0.00 0.00 3.53
374 375 0.104120 TCTCGATGGCGTTGTATGGG 59.896 55.000 0.00 0.00 38.98 4.00
375 376 0.179084 CTCGATGGCGTTGTATGGGT 60.179 55.000 0.00 0.00 38.98 4.51
376 377 1.067974 CTCGATGGCGTTGTATGGGTA 59.932 52.381 0.00 0.00 38.98 3.69
377 378 1.202440 TCGATGGCGTTGTATGGGTAC 60.202 52.381 0.00 0.00 38.98 3.34
459 460 8.306313 TCAGCCTTTCTGTTATCAGTAATCTA 57.694 34.615 0.83 0.00 43.32 1.98
747 749 6.475402 GGAAAAACAGTTTGATCGTGATGTTT 59.525 34.615 0.00 11.09 41.28 2.83
799 801 1.003118 GGATGACACTGGTTACCTGCA 59.997 52.381 8.22 0.00 0.00 4.41
811 813 1.368641 TACCTGCAACGTGATGATGC 58.631 50.000 2.20 2.20 45.84 3.91
822 824 4.953667 ACGTGATGATGCTGATTCTACAT 58.046 39.130 0.00 0.00 0.00 2.29
1007 1011 4.088634 CCAACAGGATTGAGAATGGGAAA 58.911 43.478 0.00 0.00 0.00 3.13
1023 1027 2.937149 GGGAAATCGGACTAGCAAAGAC 59.063 50.000 0.00 0.00 0.00 3.01
1316 1320 5.545723 AGGTATGGAATAAGACATCTCTGGG 59.454 44.000 0.00 0.00 0.00 4.45
1338 1342 4.584743 GGCCTCCCAAAATAGGAATACTTG 59.415 45.833 0.00 0.00 34.58 3.16
1408 1412 1.816224 ACACGCTGTGTTTTTGAAGGT 59.184 42.857 8.25 0.00 45.08 3.50
1451 1455 0.937304 ATGCCGTTGTATTAGCTGCG 59.063 50.000 0.00 0.00 0.00 5.18
1524 1528 6.542821 TCAAGGTAATGGAAGAAACACATCT 58.457 36.000 0.00 0.00 0.00 2.90
1526 1530 6.824305 AGGTAATGGAAGAAACACATCTTG 57.176 37.500 0.00 0.00 39.70 3.02
1538 1546 3.867055 CACATCTTGTCTGTGTGTGTC 57.133 47.619 0.00 0.00 39.30 3.67
1550 1558 1.128507 GTGTGTGTCTGTGTGTGTGTG 59.871 52.381 0.00 0.00 0.00 3.82
1991 1999 8.228206 TCTGTCCCTAAGATTACTCAGACATAT 58.772 37.037 0.00 0.00 0.00 1.78
2003 2011 4.274705 ACTCAGACATATACTGCTCTGTCG 59.725 45.833 0.00 0.00 42.16 4.35
2111 2119 6.406961 GGTTTCCCTTGACCATTCATTTATCC 60.407 42.308 0.00 0.00 35.95 2.59
2352 2360 8.681486 TGAATATATTACAAGTTGCTGCATCT 57.319 30.769 1.84 5.09 0.00 2.90
2418 2426 3.741075 CGAATCAAGGGAATGACCGATCA 60.741 47.826 0.00 0.00 40.11 2.92
2682 2690 2.896443 GTAAGAGCTCGCTGGCCT 59.104 61.111 8.37 0.00 0.00 5.19
2730 2738 9.194972 TCTAATGGTCATATTATCCTGCTAGAG 57.805 37.037 0.00 0.00 0.00 2.43
2894 2903 5.733620 ATGCATTTGGAGTTCTTCACATT 57.266 34.783 0.00 0.00 0.00 2.71
2930 2939 0.968405 ACAGCCGCAAATTGATGGTT 59.032 45.000 0.00 0.00 0.00 3.67
3087 3096 6.588719 ACAGTATTTGCCTTGCTGAAATTA 57.411 33.333 0.00 0.00 0.00 1.40
3244 3253 3.096092 AGGAAGTTACTCAGAGAGCAGG 58.904 50.000 3.79 0.00 32.04 4.85
3376 3385 3.984633 GTGACAAGAGAATATCGCTAGGC 59.015 47.826 0.00 0.00 0.00 3.93
3521 3530 6.460123 GGTTACACATCCTTTGGCTATTGATG 60.460 42.308 0.00 0.00 38.94 3.07
3782 3791 2.982470 CTCTTGCCTTGTTTCGAAATGC 59.018 45.455 14.69 14.29 0.00 3.56
3804 3813 7.182817 TGCAAGTCCACTACAGAATTAGTAT 57.817 36.000 0.00 0.00 30.76 2.12
3806 3815 8.100791 TGCAAGTCCACTACAGAATTAGTATTT 58.899 33.333 0.00 0.00 30.76 1.40
3889 3898 5.329399 TGGGATAGTTGGCTAAACATGTTT 58.671 37.500 25.99 25.99 41.61 2.83
3928 3937 5.414144 CCCTCAATTTCTCTTCCTTTGTCTC 59.586 44.000 0.00 0.00 0.00 3.36
3971 3982 0.179018 GGAGTGAGTGGCAACCAAGT 60.179 55.000 0.00 0.00 34.18 3.16
3980 3991 4.327680 AGTGGCAACCAAGTCTATTCTTC 58.672 43.478 0.00 0.00 34.18 2.87
3998 4009 4.693283 TCTTCGTTGTGATAATAGGGCTG 58.307 43.478 0.00 0.00 0.00 4.85
4054 4065 6.627395 ATCATCTCTTTACACGTCTCCTAG 57.373 41.667 0.00 0.00 0.00 3.02
4148 4159 8.705594 CAGGTAGGGAAGAAATTATCAGAACTA 58.294 37.037 0.00 0.00 0.00 2.24
4356 4367 5.088739 GCACACTGCTTGTTGTATATGTTC 58.911 41.667 0.00 0.00 40.96 3.18
4529 4540 9.313118 CCTAATTTAAGATTTTAATGTGTGCCC 57.687 33.333 0.00 0.00 0.00 5.36
4733 4744 3.593442 ACCATTCCAGGTTTGACTTCA 57.407 42.857 0.00 0.00 39.34 3.02
4783 4794 3.135348 TCCAGCTTCAGGATCCTACATTG 59.865 47.826 15.67 9.42 0.00 2.82
5188 5199 1.303236 CCTGCCGGAAATGTGGACA 60.303 57.895 5.05 0.00 0.00 4.02
5253 5264 5.393027 GGAGACATCGCATAAAACACCAATT 60.393 40.000 0.00 0.00 0.00 2.32
5553 5564 1.005037 AACTTCGGAGCGCATGACA 60.005 52.632 11.47 0.00 0.00 3.58
5640 5651 2.493973 CCGCCAGTCTCTCTGCTC 59.506 66.667 0.00 0.00 42.38 4.26
5658 5669 1.077265 CCACCCTCATGTTTGCCCT 59.923 57.895 0.00 0.00 0.00 5.19
5811 5822 1.922135 GCCGTGTTTGCCGTGATGAT 61.922 55.000 0.00 0.00 0.00 2.45
5949 5960 5.036737 CACACTTGTCACCAAAATCTTGTC 58.963 41.667 0.00 0.00 0.00 3.18
6112 6123 2.603075 TGCTGGGACTTTATTTGCCT 57.397 45.000 0.00 0.00 0.00 4.75
6384 6395 7.543520 GCTGGAAATGAGGTAATCTTTTTCTTG 59.456 37.037 0.00 0.00 35.90 3.02
6394 6405 5.859205 AATCTTTTTCTTGGACTGCAGTT 57.141 34.783 22.65 4.46 0.00 3.16
6411 6422 9.713740 GACTGCAGTTATTGATTATTCTTTCAG 57.286 33.333 22.65 0.00 0.00 3.02
6468 6479 2.586792 GCCCTCACTAGGCCACTG 59.413 66.667 5.01 0.00 45.16 3.66
6469 6480 1.990060 GCCCTCACTAGGCCACTGA 60.990 63.158 5.01 0.59 45.16 3.41
6473 6484 2.420687 CCCTCACTAGGCCACTGATTTC 60.421 54.545 5.01 0.00 42.14 2.17
6479 6490 0.112995 AGGCCACTGATTTCCTTGCA 59.887 50.000 5.01 0.00 0.00 4.08
6480 6491 1.188863 GGCCACTGATTTCCTTGCAT 58.811 50.000 0.00 0.00 0.00 3.96
6481 6492 1.551883 GGCCACTGATTTCCTTGCATT 59.448 47.619 0.00 0.00 0.00 3.56
6482 6493 2.760092 GGCCACTGATTTCCTTGCATTA 59.240 45.455 0.00 0.00 0.00 1.90
6483 6494 3.429410 GGCCACTGATTTCCTTGCATTAC 60.429 47.826 0.00 0.00 0.00 1.89
6484 6495 3.429410 GCCACTGATTTCCTTGCATTACC 60.429 47.826 0.00 0.00 0.00 2.85
6485 6496 3.763360 CCACTGATTTCCTTGCATTACCA 59.237 43.478 0.00 0.00 0.00 3.25
6486 6497 4.380867 CCACTGATTTCCTTGCATTACCAC 60.381 45.833 0.00 0.00 0.00 4.16
6487 6498 4.218200 CACTGATTTCCTTGCATTACCACA 59.782 41.667 0.00 0.00 0.00 4.17
6488 6499 4.832266 ACTGATTTCCTTGCATTACCACAA 59.168 37.500 0.00 0.00 0.00 3.33
6489 6500 5.132897 TGATTTCCTTGCATTACCACAAC 57.867 39.130 0.00 0.00 0.00 3.32
6490 6501 4.021544 TGATTTCCTTGCATTACCACAACC 60.022 41.667 0.00 0.00 0.00 3.77
6491 6502 2.666272 TCCTTGCATTACCACAACCA 57.334 45.000 0.00 0.00 0.00 3.67
6492 6503 3.168035 TCCTTGCATTACCACAACCAT 57.832 42.857 0.00 0.00 0.00 3.55
6493 6504 3.505386 TCCTTGCATTACCACAACCATT 58.495 40.909 0.00 0.00 0.00 3.16
6494 6505 3.509575 TCCTTGCATTACCACAACCATTC 59.490 43.478 0.00 0.00 0.00 2.67
6495 6506 3.368323 CCTTGCATTACCACAACCATTCC 60.368 47.826 0.00 0.00 0.00 3.01
6496 6507 3.168035 TGCATTACCACAACCATTCCT 57.832 42.857 0.00 0.00 0.00 3.36
6497 6508 3.505386 TGCATTACCACAACCATTCCTT 58.495 40.909 0.00 0.00 0.00 3.36
6498 6509 3.900601 TGCATTACCACAACCATTCCTTT 59.099 39.130 0.00 0.00 0.00 3.11
6499 6510 5.080337 TGCATTACCACAACCATTCCTTTA 58.920 37.500 0.00 0.00 0.00 1.85
6500 6511 5.047660 TGCATTACCACAACCATTCCTTTAC 60.048 40.000 0.00 0.00 0.00 2.01
6501 6512 5.623596 GCATTACCACAACCATTCCTTTACC 60.624 44.000 0.00 0.00 0.00 2.85
6502 6513 3.895704 ACCACAACCATTCCTTTACCT 57.104 42.857 0.00 0.00 0.00 3.08
6503 6514 4.193240 ACCACAACCATTCCTTTACCTT 57.807 40.909 0.00 0.00 0.00 3.50
6504 6515 4.149598 ACCACAACCATTCCTTTACCTTC 58.850 43.478 0.00 0.00 0.00 3.46
6505 6516 4.141018 ACCACAACCATTCCTTTACCTTCT 60.141 41.667 0.00 0.00 0.00 2.85
6506 6517 4.459337 CCACAACCATTCCTTTACCTTCTC 59.541 45.833 0.00 0.00 0.00 2.87
6507 6518 5.070001 CACAACCATTCCTTTACCTTCTCA 58.930 41.667 0.00 0.00 0.00 3.27
6508 6519 5.182001 CACAACCATTCCTTTACCTTCTCAG 59.818 44.000 0.00 0.00 0.00 3.35
6509 6520 3.956744 ACCATTCCTTTACCTTCTCAGC 58.043 45.455 0.00 0.00 0.00 4.26
6512 6523 4.335416 CATTCCTTTACCTTCTCAGCCAA 58.665 43.478 0.00 0.00 0.00 4.52
6529 6540 2.610374 GCCAAGACGTTTGTGTCAGTTA 59.390 45.455 0.00 0.00 41.41 2.24
6554 6565 4.116961 CGTTCTCAAACCACAACAGTCTA 58.883 43.478 0.00 0.00 31.27 2.59
6566 6577 6.777580 ACCACAACAGTCTAAGATGGAAATTT 59.222 34.615 0.00 0.00 0.00 1.82
6567 6578 7.287696 ACCACAACAGTCTAAGATGGAAATTTT 59.712 33.333 0.00 0.00 0.00 1.82
6568 6579 8.792633 CCACAACAGTCTAAGATGGAAATTTTA 58.207 33.333 0.00 0.00 0.00 1.52
6600 6611 9.767684 TTTTATTATACTCACGAAGTTGCATTG 57.232 29.630 0.00 0.00 41.61 2.82
6646 6657 5.152623 TCTGTGTTTCTGGGATTCTACAG 57.847 43.478 0.00 0.00 36.53 2.74
6649 6660 6.037786 TGTGTTTCTGGGATTCTACAGTAG 57.962 41.667 0.47 0.47 36.17 2.57
6675 6686 0.107410 ACAGCCGACACAAGTCCAAA 60.107 50.000 0.00 0.00 41.87 3.28
6700 6711 3.643320 AGTGTGGTGTGAGATCTTCTGAA 59.357 43.478 0.00 0.00 0.00 3.02
6722 6733 3.197265 CAAACTTGTTGGCCTTTCCTTG 58.803 45.455 3.32 0.00 35.26 3.61
6730 6741 4.651503 TGTTGGCCTTTCCTTGAAACAATA 59.348 37.500 3.32 0.00 35.26 1.90
6731 6742 5.306678 TGTTGGCCTTTCCTTGAAACAATAT 59.693 36.000 3.32 0.00 35.26 1.28
6787 6798 4.210120 GCTGAAGTATATTCCAACTCAGCG 59.790 45.833 5.50 0.00 37.26 5.18
6802 6813 2.009051 TCAGCGACTGTGCCATTTATG 58.991 47.619 6.72 0.00 34.65 1.90
6843 6854 6.778069 AGCATAGTAAGAGAAGCATGGTAGTA 59.222 38.462 0.00 0.00 0.00 1.82
6882 6893 4.734398 AGGTTGACATTGCACTGAAAAA 57.266 36.364 11.48 0.00 0.00 1.94
6912 6924 0.254462 TATGGCATGGCTTCGGAACA 59.746 50.000 21.08 0.00 0.00 3.18
6914 6926 0.611618 TGGCATGGCTTCGGAACAAT 60.612 50.000 21.08 0.00 0.00 2.71
6920 6932 2.653726 TGGCTTCGGAACAATGCATAT 58.346 42.857 0.00 0.00 0.00 1.78
6929 6941 5.523552 TCGGAACAATGCATATGAGTACTTG 59.476 40.000 6.97 4.55 0.00 3.16
6945 6957 8.420374 TGAGTACTTGCTTATAGTATTTGTGC 57.580 34.615 0.00 0.00 31.31 4.57
6948 6960 6.683974 ACTTGCTTATAGTATTTGTGCCAG 57.316 37.500 0.00 0.00 0.00 4.85
7006 7020 3.665323 CGTGCAAGTTCAGAAGTGTATGC 60.665 47.826 6.28 6.28 0.00 3.14
7007 7021 3.499918 GTGCAAGTTCAGAAGTGTATGCT 59.500 43.478 12.39 0.00 0.00 3.79
7008 7022 3.499537 TGCAAGTTCAGAAGTGTATGCTG 59.500 43.478 12.39 0.00 0.00 4.41
7028 7043 5.240623 TGCTGGTACTTGTTTTGTGGAATAG 59.759 40.000 0.00 0.00 0.00 1.73
7031 7046 6.358178 TGGTACTTGTTTTGTGGAATAGTGA 58.642 36.000 0.00 0.00 0.00 3.41
7039 7054 7.950512 TGTTTTGTGGAATAGTGATGTGAATT 58.049 30.769 0.00 0.00 0.00 2.17
7073 7094 8.691661 ATTCTCACTGTAAAAGCTTCCTTTTA 57.308 30.769 0.00 4.92 46.53 1.52
7085 7106 9.528489 AAAAGCTTCCTTTTATTATGTAGTCCA 57.472 29.630 0.00 0.00 46.53 4.02
7086 7107 9.700831 AAAGCTTCCTTTTATTATGTAGTCCAT 57.299 29.630 0.00 0.00 38.06 3.41
7087 7108 8.910351 AGCTTCCTTTTATTATGTAGTCCATC 57.090 34.615 0.00 0.00 34.86 3.51
7088 7109 7.939588 AGCTTCCTTTTATTATGTAGTCCATCC 59.060 37.037 0.00 0.00 34.86 3.51
7089 7110 7.939588 GCTTCCTTTTATTATGTAGTCCATCCT 59.060 37.037 0.00 0.00 34.86 3.24
7097 7118 9.837681 TTATTATGTAGTCCATCCTAATCCAGA 57.162 33.333 0.00 0.00 34.86 3.86
7098 7119 8.742125 ATTATGTAGTCCATCCTAATCCAGAA 57.258 34.615 0.00 0.00 34.86 3.02
7099 7120 8.742125 TTATGTAGTCCATCCTAATCCAGAAT 57.258 34.615 0.00 0.00 34.86 2.40
7100 7121 6.425210 TGTAGTCCATCCTAATCCAGAATG 57.575 41.667 0.00 0.00 0.00 2.67
7101 7122 4.363991 AGTCCATCCTAATCCAGAATGC 57.636 45.455 0.00 0.00 31.97 3.56
7102 7123 3.979347 AGTCCATCCTAATCCAGAATGCT 59.021 43.478 0.00 0.00 31.97 3.79
7103 7124 5.158141 AGTCCATCCTAATCCAGAATGCTA 58.842 41.667 0.00 0.00 31.97 3.49
7104 7125 5.608437 AGTCCATCCTAATCCAGAATGCTAA 59.392 40.000 0.00 0.00 31.97 3.09
7105 7126 6.274200 AGTCCATCCTAATCCAGAATGCTAAT 59.726 38.462 0.00 0.00 31.97 1.73
7106 7127 6.944862 GTCCATCCTAATCCAGAATGCTAATT 59.055 38.462 0.00 0.00 31.97 1.40
7107 7128 8.103305 GTCCATCCTAATCCAGAATGCTAATTA 58.897 37.037 0.00 0.00 31.97 1.40
7108 7129 8.668653 TCCATCCTAATCCAGAATGCTAATTAA 58.331 33.333 0.00 0.00 31.97 1.40
7109 7130 8.954350 CCATCCTAATCCAGAATGCTAATTAAG 58.046 37.037 0.00 0.00 31.97 1.85
7121 7142 4.558538 GCTAATTAAGCCACATCACCAG 57.441 45.455 0.00 0.00 46.25 4.00
7122 7143 3.316308 GCTAATTAAGCCACATCACCAGG 59.684 47.826 0.00 0.00 46.25 4.45
7123 7144 3.737559 AATTAAGCCACATCACCAGGA 57.262 42.857 0.00 0.00 0.00 3.86
7124 7145 3.737559 ATTAAGCCACATCACCAGGAA 57.262 42.857 0.00 0.00 0.00 3.36
7125 7146 2.489938 TAAGCCACATCACCAGGAAC 57.510 50.000 0.00 0.00 0.00 3.62
7126 7147 0.251341 AAGCCACATCACCAGGAACC 60.251 55.000 0.00 0.00 0.00 3.62
7127 7148 1.074775 GCCACATCACCAGGAACCA 59.925 57.895 0.00 0.00 0.00 3.67
7128 7149 0.323725 GCCACATCACCAGGAACCAT 60.324 55.000 0.00 0.00 0.00 3.55
7129 7150 1.064758 GCCACATCACCAGGAACCATA 60.065 52.381 0.00 0.00 0.00 2.74
7130 7151 2.620367 GCCACATCACCAGGAACCATAA 60.620 50.000 0.00 0.00 0.00 1.90
7131 7152 3.016736 CCACATCACCAGGAACCATAAC 58.983 50.000 0.00 0.00 0.00 1.89
7132 7153 3.016736 CACATCACCAGGAACCATAACC 58.983 50.000 0.00 0.00 0.00 2.85
7133 7154 2.647299 ACATCACCAGGAACCATAACCA 59.353 45.455 0.00 0.00 0.00 3.67
7134 7155 3.269381 ACATCACCAGGAACCATAACCAT 59.731 43.478 0.00 0.00 0.00 3.55
7135 7156 4.264352 ACATCACCAGGAACCATAACCATT 60.264 41.667 0.00 0.00 0.00 3.16
7136 7157 5.044476 ACATCACCAGGAACCATAACCATTA 60.044 40.000 0.00 0.00 0.00 1.90
7137 7158 5.110814 TCACCAGGAACCATAACCATTAG 57.889 43.478 0.00 0.00 0.00 1.73
7138 7159 4.080015 TCACCAGGAACCATAACCATTAGG 60.080 45.833 0.00 0.00 42.21 2.69
7155 7176 6.948353 CCATTAGGTCGAACTTCACATATTG 58.052 40.000 9.04 0.00 0.00 1.90
7156 7177 6.761242 CCATTAGGTCGAACTTCACATATTGA 59.239 38.462 9.04 0.00 0.00 2.57
7157 7178 7.254455 CCATTAGGTCGAACTTCACATATTGAC 60.254 40.741 9.04 0.00 32.26 3.18
7158 7179 4.504858 AGGTCGAACTTCACATATTGACC 58.495 43.478 0.00 3.34 43.82 4.02
7159 7180 3.621715 GGTCGAACTTCACATATTGACCC 59.378 47.826 0.00 0.00 38.92 4.46
7160 7181 4.504858 GTCGAACTTCACATATTGACCCT 58.495 43.478 0.00 0.00 32.26 4.34
7161 7182 4.935808 GTCGAACTTCACATATTGACCCTT 59.064 41.667 0.00 0.00 32.26 3.95
7162 7183 5.411669 GTCGAACTTCACATATTGACCCTTT 59.588 40.000 0.00 0.00 32.26 3.11
7163 7184 6.001460 TCGAACTTCACATATTGACCCTTTT 58.999 36.000 0.00 0.00 32.26 2.27
7164 7185 6.148811 TCGAACTTCACATATTGACCCTTTTC 59.851 38.462 0.00 0.00 32.26 2.29
7165 7186 5.880054 ACTTCACATATTGACCCTTTTCG 57.120 39.130 0.00 0.00 32.26 3.46
7166 7187 5.556915 ACTTCACATATTGACCCTTTTCGA 58.443 37.500 0.00 0.00 32.26 3.71
7167 7188 6.180472 ACTTCACATATTGACCCTTTTCGAT 58.820 36.000 0.00 0.00 32.26 3.59
7168 7189 6.316390 ACTTCACATATTGACCCTTTTCGATC 59.684 38.462 0.00 0.00 32.26 3.69
7169 7190 5.989477 TCACATATTGACCCTTTTCGATCT 58.011 37.500 0.00 0.00 0.00 2.75
7170 7191 5.817296 TCACATATTGACCCTTTTCGATCTG 59.183 40.000 0.00 0.00 0.00 2.90
7171 7192 5.817296 CACATATTGACCCTTTTCGATCTGA 59.183 40.000 0.00 0.00 0.00 3.27
7172 7193 6.484643 CACATATTGACCCTTTTCGATCTGAT 59.515 38.462 0.00 0.00 0.00 2.90
7173 7194 6.484643 ACATATTGACCCTTTTCGATCTGATG 59.515 38.462 0.00 0.00 0.00 3.07
7174 7195 3.981071 TGACCCTTTTCGATCTGATGT 57.019 42.857 0.00 0.00 0.00 3.06
7175 7196 5.414789 TTGACCCTTTTCGATCTGATGTA 57.585 39.130 0.00 0.00 0.00 2.29
7176 7197 4.755411 TGACCCTTTTCGATCTGATGTAC 58.245 43.478 0.00 0.00 0.00 2.90
7177 7198 4.466370 TGACCCTTTTCGATCTGATGTACT 59.534 41.667 0.00 0.00 0.00 2.73
7178 7199 5.046591 TGACCCTTTTCGATCTGATGTACTT 60.047 40.000 0.00 0.00 0.00 2.24
7179 7200 5.178797 ACCCTTTTCGATCTGATGTACTTG 58.821 41.667 0.00 0.00 0.00 3.16
7180 7201 4.034510 CCCTTTTCGATCTGATGTACTTGC 59.965 45.833 0.00 0.00 0.00 4.01
7181 7202 4.259970 CCTTTTCGATCTGATGTACTTGCG 60.260 45.833 0.00 0.00 0.00 4.85
7182 7203 3.775661 TTCGATCTGATGTACTTGCGA 57.224 42.857 0.00 0.00 0.00 5.10
7183 7204 3.066369 TCGATCTGATGTACTTGCGAC 57.934 47.619 0.00 0.00 0.00 5.19
7184 7205 2.683362 TCGATCTGATGTACTTGCGACT 59.317 45.455 0.00 0.00 0.00 4.18
7185 7206 2.786027 CGATCTGATGTACTTGCGACTG 59.214 50.000 0.00 0.00 0.00 3.51
7186 7207 3.487544 CGATCTGATGTACTTGCGACTGA 60.488 47.826 0.00 0.00 0.00 3.41
7187 7208 3.494045 TCTGATGTACTTGCGACTGAG 57.506 47.619 0.00 0.00 0.00 3.35
7188 7209 3.081804 TCTGATGTACTTGCGACTGAGA 58.918 45.455 0.00 0.00 0.00 3.27
7189 7210 3.127721 TCTGATGTACTTGCGACTGAGAG 59.872 47.826 0.00 0.00 0.00 3.20
7190 7211 3.081804 TGATGTACTTGCGACTGAGAGA 58.918 45.455 0.00 0.00 0.00 3.10
7191 7212 2.991434 TGTACTTGCGACTGAGAGAC 57.009 50.000 0.00 0.00 0.00 3.36
7192 7213 2.505405 TGTACTTGCGACTGAGAGACT 58.495 47.619 0.00 0.00 0.00 3.24
7193 7214 2.885266 TGTACTTGCGACTGAGAGACTT 59.115 45.455 0.00 0.00 0.00 3.01
7194 7215 2.430546 ACTTGCGACTGAGAGACTTG 57.569 50.000 0.00 0.00 0.00 3.16
7195 7216 1.957177 ACTTGCGACTGAGAGACTTGA 59.043 47.619 0.00 0.00 0.00 3.02
7196 7217 2.560542 ACTTGCGACTGAGAGACTTGAT 59.439 45.455 0.00 0.00 0.00 2.57
7197 7218 3.006323 ACTTGCGACTGAGAGACTTGATT 59.994 43.478 0.00 0.00 0.00 2.57
7198 7219 2.951726 TGCGACTGAGAGACTTGATTG 58.048 47.619 0.00 0.00 0.00 2.67
7199 7220 2.266554 GCGACTGAGAGACTTGATTGG 58.733 52.381 0.00 0.00 0.00 3.16
7200 7221 2.094494 GCGACTGAGAGACTTGATTGGA 60.094 50.000 0.00 0.00 0.00 3.53
7201 7222 3.506810 CGACTGAGAGACTTGATTGGAC 58.493 50.000 0.00 0.00 0.00 4.02
7202 7223 3.057245 CGACTGAGAGACTTGATTGGACA 60.057 47.826 0.00 0.00 0.00 4.02
7203 7224 4.241681 GACTGAGAGACTTGATTGGACAC 58.758 47.826 0.00 0.00 0.00 3.67
7204 7225 3.900601 ACTGAGAGACTTGATTGGACACT 59.099 43.478 0.00 0.00 0.00 3.55
7205 7226 4.346418 ACTGAGAGACTTGATTGGACACTT 59.654 41.667 0.00 0.00 0.00 3.16
7206 7227 5.540337 ACTGAGAGACTTGATTGGACACTTA 59.460 40.000 0.00 0.00 0.00 2.24
7207 7228 6.030548 TGAGAGACTTGATTGGACACTTAG 57.969 41.667 0.00 0.00 0.00 2.18
7208 7229 5.047021 TGAGAGACTTGATTGGACACTTAGG 60.047 44.000 0.00 0.00 0.00 2.69
7209 7230 4.841246 AGAGACTTGATTGGACACTTAGGT 59.159 41.667 0.00 0.00 0.00 3.08
7210 7231 6.017192 AGAGACTTGATTGGACACTTAGGTA 58.983 40.000 0.00 0.00 0.00 3.08
7211 7232 6.497259 AGAGACTTGATTGGACACTTAGGTAA 59.503 38.462 0.00 0.00 0.00 2.85
7212 7233 7.016268 AGAGACTTGATTGGACACTTAGGTAAA 59.984 37.037 0.00 0.00 0.00 2.01
7213 7234 7.514721 AGACTTGATTGGACACTTAGGTAAAA 58.485 34.615 0.00 0.00 0.00 1.52
7214 7235 8.164070 AGACTTGATTGGACACTTAGGTAAAAT 58.836 33.333 0.00 0.00 0.00 1.82
7215 7236 8.110860 ACTTGATTGGACACTTAGGTAAAATG 57.889 34.615 0.00 0.00 0.00 2.32
7216 7237 7.942341 ACTTGATTGGACACTTAGGTAAAATGA 59.058 33.333 0.00 0.00 0.00 2.57
7217 7238 8.877864 TTGATTGGACACTTAGGTAAAATGAT 57.122 30.769 0.00 0.00 0.00 2.45
7218 7239 8.279970 TGATTGGACACTTAGGTAAAATGATG 57.720 34.615 0.00 0.00 0.00 3.07
7219 7240 8.106462 TGATTGGACACTTAGGTAAAATGATGA 58.894 33.333 0.00 0.00 0.00 2.92
7220 7241 7.921786 TTGGACACTTAGGTAAAATGATGAG 57.078 36.000 0.00 0.00 0.00 2.90
7221 7242 7.252612 TGGACACTTAGGTAAAATGATGAGA 57.747 36.000 0.00 0.00 0.00 3.27
7222 7243 7.685481 TGGACACTTAGGTAAAATGATGAGAA 58.315 34.615 0.00 0.00 0.00 2.87
7223 7244 8.328758 TGGACACTTAGGTAAAATGATGAGAAT 58.671 33.333 0.00 0.00 0.00 2.40
7224 7245 9.178758 GGACACTTAGGTAAAATGATGAGAATT 57.821 33.333 0.00 0.00 0.00 2.17
7236 7257 9.927668 AAAATGATGAGAATTTATGAAACGGTT 57.072 25.926 0.00 0.00 0.00 4.44
7237 7258 9.573133 AAATGATGAGAATTTATGAAACGGTTC 57.427 29.630 6.16 6.16 0.00 3.62
7238 7259 7.083875 TGATGAGAATTTATGAAACGGTTCC 57.916 36.000 11.41 0.00 32.28 3.62
7239 7260 5.890424 TGAGAATTTATGAAACGGTTCCC 57.110 39.130 11.41 0.00 32.28 3.97
7240 7261 5.317808 TGAGAATTTATGAAACGGTTCCCA 58.682 37.500 11.41 0.00 32.28 4.37
7241 7262 5.949354 TGAGAATTTATGAAACGGTTCCCAT 59.051 36.000 11.41 1.31 32.28 4.00
7242 7263 6.435904 TGAGAATTTATGAAACGGTTCCCATT 59.564 34.615 11.41 3.49 32.28 3.16
7243 7264 6.630071 AGAATTTATGAAACGGTTCCCATTG 58.370 36.000 11.41 0.00 32.28 2.82
7244 7265 4.792521 TTTATGAAACGGTTCCCATTGG 57.207 40.909 11.41 0.00 32.28 3.16
7245 7266 0.894835 ATGAAACGGTTCCCATTGGC 59.105 50.000 11.41 0.00 32.28 4.52
7246 7267 0.468214 TGAAACGGTTCCCATTGGCA 60.468 50.000 11.41 0.00 32.28 4.92
7247 7268 0.894835 GAAACGGTTCCCATTGGCAT 59.105 50.000 0.32 0.00 0.00 4.40
7248 7269 2.096248 GAAACGGTTCCCATTGGCATA 58.904 47.619 0.32 0.00 0.00 3.14
7249 7270 2.452600 AACGGTTCCCATTGGCATAT 57.547 45.000 0.00 0.00 0.00 1.78
7250 7271 1.691196 ACGGTTCCCATTGGCATATG 58.309 50.000 0.00 0.00 0.00 1.78
7251 7272 1.214175 ACGGTTCCCATTGGCATATGA 59.786 47.619 6.97 0.00 0.00 2.15
7252 7273 2.305928 CGGTTCCCATTGGCATATGAA 58.694 47.619 6.97 0.00 0.00 2.57
7253 7274 2.692557 CGGTTCCCATTGGCATATGAAA 59.307 45.455 6.97 0.00 0.00 2.69
7254 7275 3.131933 CGGTTCCCATTGGCATATGAAAA 59.868 43.478 6.97 0.00 0.00 2.29
7255 7276 4.382470 CGGTTCCCATTGGCATATGAAAAA 60.382 41.667 6.97 0.00 0.00 1.94
7279 7300 5.568620 AAAACTTGGTAGTGACATCCTCT 57.431 39.130 0.00 0.00 34.01 3.69
7280 7301 4.543590 AACTTGGTAGTGACATCCTCTG 57.456 45.455 0.00 0.00 34.01 3.35
7281 7302 3.511477 ACTTGGTAGTGACATCCTCTGT 58.489 45.455 0.00 0.00 42.15 3.41
7282 7303 3.259374 ACTTGGTAGTGACATCCTCTGTG 59.741 47.826 0.00 0.00 38.54 3.66
7283 7304 3.169512 TGGTAGTGACATCCTCTGTGA 57.830 47.619 0.00 0.00 38.54 3.58
7284 7305 2.826128 TGGTAGTGACATCCTCTGTGAC 59.174 50.000 0.00 0.00 41.74 3.67
7285 7306 2.826128 GGTAGTGACATCCTCTGTGACA 59.174 50.000 0.00 0.00 43.62 3.58
7286 7307 3.449018 GGTAGTGACATCCTCTGTGACAT 59.551 47.826 0.00 0.00 43.62 3.06
7287 7308 3.606595 AGTGACATCCTCTGTGACATG 57.393 47.619 0.00 0.00 43.62 3.21
7288 7309 2.235650 AGTGACATCCTCTGTGACATGG 59.764 50.000 0.00 0.00 43.62 3.66
7289 7310 1.556451 TGACATCCTCTGTGACATGGG 59.444 52.381 0.00 2.03 38.54 4.00
7290 7311 1.556911 GACATCCTCTGTGACATGGGT 59.443 52.381 0.00 0.00 38.54 4.51
7291 7312 1.280133 ACATCCTCTGTGACATGGGTG 59.720 52.381 13.94 13.94 36.48 4.61
7292 7313 1.556451 CATCCTCTGTGACATGGGTGA 59.444 52.381 11.12 0.00 32.76 4.02
7293 7314 1.956869 TCCTCTGTGACATGGGTGAT 58.043 50.000 0.00 0.00 0.00 3.06
7294 7315 3.114643 TCCTCTGTGACATGGGTGATA 57.885 47.619 0.00 0.00 0.00 2.15
7295 7316 3.657610 TCCTCTGTGACATGGGTGATAT 58.342 45.455 0.00 0.00 0.00 1.63
7296 7317 4.040047 TCCTCTGTGACATGGGTGATATT 58.960 43.478 0.00 0.00 0.00 1.28
7297 7318 5.215845 TCCTCTGTGACATGGGTGATATTA 58.784 41.667 0.00 0.00 0.00 0.98
7298 7319 5.070446 TCCTCTGTGACATGGGTGATATTAC 59.930 44.000 0.00 0.00 0.00 1.89
7299 7320 5.290493 TCTGTGACATGGGTGATATTACC 57.710 43.478 8.16 8.16 40.10 2.85
7300 7321 4.719273 TCTGTGACATGGGTGATATTACCA 59.281 41.667 17.71 7.59 42.69 3.25
7301 7322 5.369404 TCTGTGACATGGGTGATATTACCAT 59.631 40.000 17.71 9.46 45.48 3.55
7302 7323 6.012337 TGTGACATGGGTGATATTACCATT 57.988 37.500 17.71 2.28 42.08 3.16
7303 7324 6.430864 TGTGACATGGGTGATATTACCATTT 58.569 36.000 17.71 5.94 42.08 2.32
7304 7325 7.578203 TGTGACATGGGTGATATTACCATTTA 58.422 34.615 17.71 2.46 42.08 1.40
7305 7326 7.500892 TGTGACATGGGTGATATTACCATTTAC 59.499 37.037 17.71 9.21 42.08 2.01
7306 7327 7.001674 TGACATGGGTGATATTACCATTTACC 58.998 38.462 17.71 0.83 42.08 2.85
7307 7328 6.916909 ACATGGGTGATATTACCATTTACCA 58.083 36.000 17.71 6.30 42.08 3.25
7308 7329 7.358263 ACATGGGTGATATTACCATTTACCAA 58.642 34.615 17.71 0.00 42.08 3.67
7517 7538 2.601763 GCGTAACCTTGAGGATGTAACG 59.398 50.000 3.59 6.96 38.94 3.18
7580 7601 1.956170 ATTCCGCACGATCGATGCC 60.956 57.895 24.34 11.00 40.09 4.40
7688 7709 0.839277 TTGCCATGGACGATCCTGAT 59.161 50.000 18.40 0.00 37.46 2.90
7733 7754 0.882927 TCGAAGTTGGCAGGAAACGG 60.883 55.000 0.00 0.00 32.65 4.44
7751 7772 1.679139 GGCCAACCGATGATGATTCA 58.321 50.000 0.00 0.00 36.00 2.57
7784 7805 2.015726 AGGGGACTCGGAGGAGGAT 61.016 63.158 10.23 0.00 44.93 3.24
7790 7811 1.611491 GACTCGGAGGAGGATGATGAC 59.389 57.143 10.23 0.00 44.93 3.06
7841 7862 1.450642 GGGGACCGATTTAGGGCTC 59.549 63.158 0.00 0.00 40.86 4.70
7886 7907 1.630148 CTAGTAACAGCAGCGGTGAC 58.370 55.000 20.69 5.03 34.87 3.67
7925 7946 1.271102 GACGAGGAGGATATGGACAGC 59.729 57.143 0.00 0.00 0.00 4.40
7943 7964 1.087771 GCGGGGATGAAAACGACGAT 61.088 55.000 0.00 0.00 0.00 3.73
7997 8018 1.105759 GGTTGCTGGAGATGATGGGC 61.106 60.000 0.00 0.00 0.00 5.36
8003 8024 4.241555 GAGATGATGGGCGGCGGT 62.242 66.667 9.78 0.00 0.00 5.68
8006 8027 4.552365 ATGATGGGCGGCGGTGAG 62.552 66.667 9.78 0.00 0.00 3.51
8027 8051 2.402305 GGCGATGAGAGTGACATGATC 58.598 52.381 0.00 0.00 0.00 2.92
8051 8075 1.004560 CTTCAGCAGCGGTGAGGAA 60.005 57.895 20.69 18.27 41.12 3.36
8196 8226 2.183858 GAGAAACGGCGTCTTTGGGC 62.184 60.000 15.17 0.00 0.00 5.36
8222 8252 1.247567 CAGGGTAGGGTGCAAACAAG 58.752 55.000 0.00 0.00 0.00 3.16
8238 8268 6.200665 TGCAAACAAGAAATGCAAATCTGTAC 59.799 34.615 5.48 0.00 46.23 2.90
8246 8276 4.764679 ATGCAAATCTGTACGCTCAAAA 57.235 36.364 0.00 0.00 0.00 2.44
8250 8280 6.851609 TGCAAATCTGTACGCTCAAAATTAT 58.148 32.000 0.00 0.00 0.00 1.28
8251 8281 6.746822 TGCAAATCTGTACGCTCAAAATTATG 59.253 34.615 0.00 0.00 0.00 1.90
8272 8302 4.826556 TGGTTGTAAATTATTGGCCTTGC 58.173 39.130 3.32 0.00 0.00 4.01
8279 8309 0.033208 TTATTGGCCTTGCTGGGAGG 60.033 55.000 3.32 0.00 37.35 4.30
8296 8326 3.552890 GGGAGGAAGTTTACGTTACGTGT 60.553 47.826 21.22 0.00 41.39 4.49
8302 8332 3.779759 AGTTTACGTTACGTGTGTTGGA 58.220 40.909 21.22 0.00 41.39 3.53
8370 8403 7.596995 GCATTAGGTGTTGTATGTAAAAGCAAA 59.403 33.333 0.00 0.00 0.00 3.68
8385 8418 7.766278 TGTAAAAGCAAAGCTGGTAATTTTTCA 59.234 29.630 0.00 0.00 39.62 2.69
8398 8431 7.359595 TGGTAATTTTTCACTGTTTCTCATCG 58.640 34.615 0.00 0.00 0.00 3.84
8440 8473 0.664224 TGTGTTGATGCTGTGCTGTG 59.336 50.000 0.00 0.00 0.00 3.66
8450 8483 1.003116 GCTGTGCTGTGTGAAGAGTTG 60.003 52.381 0.00 0.00 0.00 3.16
8470 8503 9.185680 AGAGTTGTGTTCCTTTTTACTGTTTAT 57.814 29.630 0.00 0.00 0.00 1.40
8559 8592 2.297701 TCAAAAGCACTTGACCCAGAC 58.702 47.619 0.00 0.00 30.31 3.51
8576 8615 2.437281 CAGACCCAGAGCCATACTTGAT 59.563 50.000 0.00 0.00 0.00 2.57
8624 8663 5.721960 GGAGCATTATTATCTACTCCCTCCA 59.278 44.000 0.00 0.00 38.18 3.86
8626 8665 7.418483 GGAGCATTATTATCTACTCCCTCCATC 60.418 44.444 0.00 0.00 38.18 3.51
8629 8668 4.785173 ATTATCTACTCCCTCCATCCCA 57.215 45.455 0.00 0.00 0.00 4.37
8635 8674 5.293643 TCTACTCCCTCCATCCCAAAATAA 58.706 41.667 0.00 0.00 0.00 1.40
8637 8676 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
8640 8679 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
8643 8682 6.423182 CCTCCATCCCAAAATAAGTGTCTTA 58.577 40.000 0.00 0.00 0.00 2.10
8644 8683 6.889722 CCTCCATCCCAAAATAAGTGTCTTAA 59.110 38.462 0.00 0.00 0.00 1.85
8645 8684 7.067494 CCTCCATCCCAAAATAAGTGTCTTAAG 59.933 40.741 0.00 0.00 0.00 1.85
8646 8685 6.377146 TCCATCCCAAAATAAGTGTCTTAAGC 59.623 38.462 0.00 0.00 0.00 3.09
8647 8686 6.378280 CCATCCCAAAATAAGTGTCTTAAGCT 59.622 38.462 0.00 0.00 0.00 3.74
8648 8687 7.093771 CCATCCCAAAATAAGTGTCTTAAGCTT 60.094 37.037 3.48 3.48 0.00 3.74
8649 8688 8.956426 CATCCCAAAATAAGTGTCTTAAGCTTA 58.044 33.333 0.86 0.86 0.00 3.09
8650 8689 8.561738 TCCCAAAATAAGTGTCTTAAGCTTAG 57.438 34.615 6.24 1.77 0.00 2.18
8652 8691 9.444600 CCCAAAATAAGTGTCTTAAGCTTAGTA 57.555 33.333 6.24 0.00 0.00 1.82
8665 8805 9.444600 TCTTAAGCTTAGTACACTTATTTTGGG 57.555 33.333 6.24 0.00 0.00 4.12
8689 8832 4.523173 ACGGAGGGAGTATGTATGTATGTG 59.477 45.833 0.00 0.00 0.00 3.21
8693 8836 4.040461 AGGGAGTATGTATGTATGTGCCAC 59.960 45.833 0.00 0.00 0.00 5.01
8694 8837 4.040461 GGGAGTATGTATGTATGTGCCACT 59.960 45.833 0.00 0.00 0.00 4.00
8695 8838 5.245301 GGGAGTATGTATGTATGTGCCACTA 59.755 44.000 0.00 0.00 0.00 2.74
8696 8839 6.390721 GGAGTATGTATGTATGTGCCACTAG 58.609 44.000 0.00 0.00 0.00 2.57
8697 8840 6.208797 GGAGTATGTATGTATGTGCCACTAGA 59.791 42.308 0.00 0.00 0.00 2.43
8698 8841 7.220741 AGTATGTATGTATGTGCCACTAGAG 57.779 40.000 0.00 0.00 0.00 2.43
8707 8850 2.811101 CCACTAGAGGCAGAGGCG 59.189 66.667 0.00 0.00 42.47 5.52
8708 8851 1.754621 CCACTAGAGGCAGAGGCGA 60.755 63.158 0.00 0.00 42.47 5.54
8709 8852 1.732917 CACTAGAGGCAGAGGCGAG 59.267 63.158 0.00 0.00 42.47 5.03
8710 8853 0.749818 CACTAGAGGCAGAGGCGAGA 60.750 60.000 0.00 0.00 42.47 4.04
8711 8854 0.750182 ACTAGAGGCAGAGGCGAGAC 60.750 60.000 0.00 0.00 42.47 3.36
8712 8855 1.781025 CTAGAGGCAGAGGCGAGACG 61.781 65.000 0.00 0.00 42.47 4.18
8713 8856 4.200283 GAGGCAGAGGCGAGACGG 62.200 72.222 0.00 0.00 42.47 4.79
8731 8874 3.234390 CCACGCGAGGCATATTCG 58.766 61.111 15.93 0.00 40.85 3.34
8732 8875 1.591594 CCACGCGAGGCATATTCGT 60.592 57.895 15.93 0.00 40.08 3.85
8737 8880 1.286501 GCGAGGCATATTCGTGAACA 58.713 50.000 0.00 0.00 40.08 3.18
8738 8881 1.867233 GCGAGGCATATTCGTGAACAT 59.133 47.619 0.00 0.00 40.08 2.71
8739 8882 2.287915 GCGAGGCATATTCGTGAACATT 59.712 45.455 0.00 0.00 40.08 2.71
8740 8883 3.604772 GCGAGGCATATTCGTGAACATTC 60.605 47.826 0.00 0.00 40.08 2.67
8741 8884 3.804325 CGAGGCATATTCGTGAACATTCT 59.196 43.478 0.00 0.00 33.57 2.40
8742 8885 4.271049 CGAGGCATATTCGTGAACATTCTT 59.729 41.667 0.00 0.00 33.57 2.52
8744 8887 6.515272 AGGCATATTCGTGAACATTCTTTT 57.485 33.333 0.00 0.00 0.00 2.27
8745 8888 6.324819 AGGCATATTCGTGAACATTCTTTTG 58.675 36.000 0.00 0.00 0.00 2.44
8746 8889 6.150976 AGGCATATTCGTGAACATTCTTTTGA 59.849 34.615 0.00 0.00 0.00 2.69
8748 8891 7.328249 GGCATATTCGTGAACATTCTTTTGAAA 59.672 33.333 0.00 0.00 42.31 2.69
8750 8893 9.398170 CATATTCGTGAACATTCTTTTGAAACT 57.602 29.630 0.00 0.00 42.31 2.66
8751 8894 7.914537 ATTCGTGAACATTCTTTTGAAACTC 57.085 32.000 0.00 0.00 42.31 3.01
8753 8896 7.026631 TCGTGAACATTCTTTTGAAACTCAT 57.973 32.000 0.00 0.00 42.31 2.90
8754 8897 6.912051 TCGTGAACATTCTTTTGAAACTCATG 59.088 34.615 0.00 0.00 42.31 3.07
8755 8898 6.912051 CGTGAACATTCTTTTGAAACTCATGA 59.088 34.615 0.00 0.00 42.31 3.07
8756 8899 7.431960 CGTGAACATTCTTTTGAAACTCATGAA 59.568 33.333 0.00 0.00 42.31 2.57
8757 8900 8.534778 GTGAACATTCTTTTGAAACTCATGAAC 58.465 33.333 0.00 0.00 42.31 3.18
8758 8901 8.249638 TGAACATTCTTTTGAAACTCATGAACA 58.750 29.630 0.00 0.00 42.31 3.18
8760 8903 9.603921 AACATTCTTTTGAAACTCATGAACATT 57.396 25.926 0.00 0.00 42.31 2.71
8787 8930 9.617975 TTTTTAGAATTGCCAAACAACTTTTTG 57.382 25.926 0.00 0.00 42.27 2.44
8788 8931 8.553459 TTTAGAATTGCCAAACAACTTTTTGA 57.447 26.923 0.00 0.00 42.27 2.69
8789 8932 8.553459 TTAGAATTGCCAAACAACTTTTTGAA 57.447 26.923 0.00 0.00 42.27 2.69
8790 8933 7.446001 AGAATTGCCAAACAACTTTTTGAAA 57.554 28.000 0.00 0.00 42.27 2.69
8791 8934 8.054152 AGAATTGCCAAACAACTTTTTGAAAT 57.946 26.923 0.00 0.00 42.27 2.17
8792 8935 8.522003 AGAATTGCCAAACAACTTTTTGAAATT 58.478 25.926 0.00 3.89 42.27 1.82
8793 8936 9.138062 GAATTGCCAAACAACTTTTTGAAATTT 57.862 25.926 0.00 0.00 42.27 1.82
8794 8937 7.864307 TTGCCAAACAACTTTTTGAAATTTG 57.136 28.000 0.00 3.04 38.54 2.32
8795 8938 6.974965 TGCCAAACAACTTTTTGAAATTTGT 58.025 28.000 0.00 4.07 38.54 2.83
8796 8939 7.428826 TGCCAAACAACTTTTTGAAATTTGTT 58.571 26.923 12.95 12.95 41.09 2.83
8798 8941 9.399403 GCCAAACAACTTTTTGAAATTTGTTAA 57.601 25.926 16.78 0.00 39.00 2.01
8856 8999 8.947304 TTTGACAAACTTTCTTTTTGAAATGC 57.053 26.923 0.00 0.00 42.96 3.56
8857 9000 7.664082 TGACAAACTTTCTTTTTGAAATGCA 57.336 28.000 0.00 0.00 42.96 3.96
8858 9001 8.266392 TGACAAACTTTCTTTTTGAAATGCAT 57.734 26.923 0.00 0.00 42.96 3.96
8859 9002 8.176365 TGACAAACTTTCTTTTTGAAATGCATG 58.824 29.630 0.00 0.00 42.96 4.06
8861 9004 8.728833 ACAAACTTTCTTTTTGAAATGCATGAA 58.271 25.926 0.00 0.00 42.96 2.57
8862 9005 9.002080 CAAACTTTCTTTTTGAAATGCATGAAC 57.998 29.630 0.00 0.00 42.96 3.18
8863 9006 7.846644 ACTTTCTTTTTGAAATGCATGAACA 57.153 28.000 0.00 0.00 42.96 3.18
8864 9007 8.441312 ACTTTCTTTTTGAAATGCATGAACAT 57.559 26.923 0.00 0.00 42.96 2.71
8865 9008 8.895737 ACTTTCTTTTTGAAATGCATGAACATT 58.104 25.926 0.00 0.00 42.96 2.71
8913 9056 8.746922 TTGAATCAGTGAACAATATTTGAAGC 57.253 30.769 0.00 0.00 0.00 3.86
8914 9057 7.022979 TGAATCAGTGAACAATATTTGAAGCG 58.977 34.615 0.00 0.00 0.00 4.68
8916 9059 4.759693 TCAGTGAACAATATTTGAAGCGGT 59.240 37.500 0.00 0.00 0.00 5.68
8917 9060 4.853196 CAGTGAACAATATTTGAAGCGGTG 59.147 41.667 0.00 0.00 0.00 4.94
8918 9061 4.759693 AGTGAACAATATTTGAAGCGGTGA 59.240 37.500 0.00 0.00 0.00 4.02
8920 9063 5.342259 GTGAACAATATTTGAAGCGGTGAAC 59.658 40.000 0.00 0.00 0.00 3.18
8921 9064 5.240623 TGAACAATATTTGAAGCGGTGAACT 59.759 36.000 0.00 0.00 0.00 3.01
8922 9065 5.705609 ACAATATTTGAAGCGGTGAACTT 57.294 34.783 0.00 0.00 0.00 2.66
8923 9066 6.084326 ACAATATTTGAAGCGGTGAACTTT 57.916 33.333 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 4.179599 GAGGGAGGGAGGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
79 80 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
80 81 2.613576 GAAGGGAGGGAGGGAGGGAG 62.614 70.000 0.00 0.00 0.00 4.30
81 82 2.543637 AAGGGAGGGAGGGAGGGA 60.544 66.667 0.00 0.00 0.00 4.20
86 87 1.358830 ATGCATGAAGGGAGGGAGGG 61.359 60.000 0.00 0.00 0.00 4.30
120 121 8.821894 AGAAGAAGATTTAAGTATGATCGCAAC 58.178 33.333 0.00 0.00 0.00 4.17
135 136 8.429641 TGTAGTGTAGGAAACAGAAGAAGATTT 58.570 33.333 0.00 0.00 39.29 2.17
277 278 5.028549 TCCTAGATGCTTCCAATCACTTC 57.971 43.478 0.00 0.00 0.00 3.01
279 280 4.472833 ACTTCCTAGATGCTTCCAATCACT 59.527 41.667 0.00 0.00 0.00 3.41
320 321 6.828788 AGCATATGTTCTCATCATCTCAGTT 58.171 36.000 4.29 0.00 35.70 3.16
374 375 5.300969 TGGTAAGACATGACAGTACGTAC 57.699 43.478 18.10 18.10 0.00 3.67
375 376 5.963176 TTGGTAAGACATGACAGTACGTA 57.037 39.130 0.00 0.00 0.00 3.57
376 377 4.859304 TTGGTAAGACATGACAGTACGT 57.141 40.909 0.00 0.00 0.00 3.57
377 378 7.200455 TCATATTGGTAAGACATGACAGTACG 58.800 38.462 0.00 0.00 0.00 3.67
410 411 9.322773 TGATGAAGAACAGAAGAATGCTATAAG 57.677 33.333 0.00 0.00 0.00 1.73
411 412 9.322773 CTGATGAAGAACAGAAGAATGCTATAA 57.677 33.333 0.00 0.00 36.38 0.98
412 413 7.440556 GCTGATGAAGAACAGAAGAATGCTATA 59.559 37.037 0.00 0.00 36.38 1.31
413 414 6.260493 GCTGATGAAGAACAGAAGAATGCTAT 59.740 38.462 0.00 0.00 36.38 2.97
459 460 5.125097 TGGCAAACAAGAAAATGCAACAATT 59.875 32.000 0.00 0.00 40.51 2.32
473 474 1.741525 CCCACCACTGGCAAACAAG 59.258 57.895 0.00 0.00 36.00 3.16
521 523 1.671979 GCATGAGCTTGGCTGATACA 58.328 50.000 0.00 0.00 39.88 2.29
747 749 1.672030 CGTGTGCTTGCCTCATCCA 60.672 57.895 0.00 0.00 0.00 3.41
799 801 4.758688 TGTAGAATCAGCATCATCACGTT 58.241 39.130 0.00 0.00 0.00 3.99
811 813 7.870509 TCAAAAGGATCCAATGTAGAATCAG 57.129 36.000 15.82 0.00 0.00 2.90
822 824 4.588106 TGACTTTGCATCAAAAGGATCCAA 59.412 37.500 15.82 0.00 40.74 3.53
1007 1011 4.537135 TTCTTGTCTTTGCTAGTCCGAT 57.463 40.909 0.00 0.00 0.00 4.18
1023 1027 0.652592 CGACCTTAGCCGCATTCTTG 59.347 55.000 0.00 0.00 0.00 3.02
1316 1320 5.201243 ACAAGTATTCCTATTTTGGGAGGC 58.799 41.667 0.00 0.00 34.06 4.70
1338 1342 6.798959 GCAGAAAATGAATCAGTGTCAAGTAC 59.201 38.462 3.59 0.00 0.00 2.73
1408 1412 4.215399 CGCCACTATTTTCACTCTTCCAAA 59.785 41.667 0.00 0.00 0.00 3.28
1524 1528 2.289382 ACACACAGACACACACAGACAA 60.289 45.455 0.00 0.00 0.00 3.18
1526 1530 1.660607 CACACACAGACACACACAGAC 59.339 52.381 0.00 0.00 0.00 3.51
1533 1541 1.270571 ACACACACACACACAGACACA 60.271 47.619 0.00 0.00 0.00 3.72
1534 1542 1.128507 CACACACACACACACAGACAC 59.871 52.381 0.00 0.00 0.00 3.67
1535 1543 1.270571 ACACACACACACACACAGACA 60.271 47.619 0.00 0.00 0.00 3.41
1536 1544 1.393539 GACACACACACACACACAGAC 59.606 52.381 0.00 0.00 0.00 3.51
1537 1545 1.720805 GACACACACACACACACAGA 58.279 50.000 0.00 0.00 0.00 3.41
1538 1546 0.369931 CGACACACACACACACACAG 59.630 55.000 0.00 0.00 0.00 3.66
1595 1603 3.755378 CAGAGCTTCTGCAATACCAAACT 59.245 43.478 0.00 0.00 37.72 2.66
1991 1999 1.153568 GCATGCCGACAGAGCAGTA 60.154 57.895 6.36 0.00 44.90 2.74
2003 2011 2.030274 ACCGAAAGTAAACAAGCATGCC 60.030 45.455 15.66 0.00 0.00 4.40
2100 2108 8.964772 GGATGCTTAGCAATAGGATAAATGAAT 58.035 33.333 12.08 0.00 43.62 2.57
2111 2119 5.609423 AGAACAGAGGATGCTTAGCAATAG 58.391 41.667 12.08 1.10 43.62 1.73
2352 2360 1.895131 GAGTTACCACCCGACCTTACA 59.105 52.381 0.00 0.00 0.00 2.41
2418 2426 3.072184 ACTGAGTCAGAATTTCAGCAGGT 59.928 43.478 26.86 0.00 41.52 4.00
2682 2690 4.870636 AGGCCAAGAATTTATCCATCACA 58.129 39.130 5.01 0.00 0.00 3.58
2730 2738 9.691362 CAATACCATATTTTTACCTGGCATAAC 57.309 33.333 0.00 0.00 31.72 1.89
2819 2828 5.717178 AGCAGGTAGACTCTGAAACAGATTA 59.283 40.000 1.92 0.00 39.92 1.75
2894 2903 4.703897 GGCTGTGTGGCATAAGAGTTATA 58.296 43.478 0.00 0.00 41.37 0.98
2930 2939 6.167685 ACGGTTGTTAGTTAATGTAGCATGA 58.832 36.000 0.00 0.00 0.00 3.07
3232 3241 0.324183 TCCTGTCCCTGCTCTCTGAG 60.324 60.000 0.00 0.00 0.00 3.35
3271 3280 2.704725 TCGCTGCAACATTTCTTTCC 57.295 45.000 0.00 0.00 0.00 3.13
3376 3385 3.155167 GGACCCCCAGCTCCTACG 61.155 72.222 0.00 0.00 0.00 3.51
3532 3541 0.600255 GCAGTACACGACAGGCAAGT 60.600 55.000 0.00 0.00 32.52 3.16
3757 3766 1.691976 TCGAAACAAGGCAAGAGAGGA 59.308 47.619 0.00 0.00 0.00 3.71
3760 3769 3.304659 GCATTTCGAAACAAGGCAAGAGA 60.305 43.478 13.81 0.00 0.00 3.10
3825 3834 6.888088 AGGTAGTGTTCAACCTTTGTAAACTT 59.112 34.615 0.00 0.00 43.77 2.66
3826 3835 6.420638 AGGTAGTGTTCAACCTTTGTAAACT 58.579 36.000 0.00 0.00 43.77 2.66
3827 3836 6.688637 AGGTAGTGTTCAACCTTTGTAAAC 57.311 37.500 0.00 0.00 43.77 2.01
3828 3837 8.983702 AATAGGTAGTGTTCAACCTTTGTAAA 57.016 30.769 0.00 0.00 43.77 2.01
3889 3898 1.132003 TGAGGGGGAAAGGGAAAGGTA 60.132 52.381 0.00 0.00 0.00 3.08
3928 3937 5.810587 CCTTTCATCTCATGGCATTTTTCAG 59.189 40.000 0.00 0.00 0.00 3.02
3971 3982 7.015292 AGCCCTATTATCACAACGAAGAATAGA 59.985 37.037 0.00 0.00 36.55 1.98
3980 3991 2.494059 CCCAGCCCTATTATCACAACG 58.506 52.381 0.00 0.00 0.00 4.10
4054 4065 2.935849 CAAAAACAAAGTTGCCCAGGAC 59.064 45.455 0.00 0.00 0.00 3.85
4347 4358 9.924650 AGTAACCAAGGAATATCGAACATATAC 57.075 33.333 0.00 0.00 0.00 1.47
4351 4362 7.878127 CCATAGTAACCAAGGAATATCGAACAT 59.122 37.037 0.00 0.00 0.00 2.71
4410 4421 3.838317 ACTCCCACATCAGCACTACTTTA 59.162 43.478 0.00 0.00 0.00 1.85
4596 4607 6.553100 AGAATTAGTCAAGACCTATCAGGAGG 59.447 42.308 0.00 0.00 37.67 4.30
4783 4794 2.814336 CCCTACACACAAAAGAAGAGCC 59.186 50.000 0.00 0.00 0.00 4.70
5188 5199 2.168106 CAGAGGCAGAGCAAGTCATACT 59.832 50.000 0.00 0.00 0.00 2.12
5253 5264 2.038863 TCCTCTTAAGTGGCAAGGGA 57.961 50.000 17.15 5.71 0.00 4.20
5553 5564 4.330944 TTGTACAACCAATGAGTCGAGT 57.669 40.909 3.59 0.00 0.00 4.18
5640 5651 1.077265 AGGGCAAACATGAGGGTGG 59.923 57.895 0.00 0.00 0.00 4.61
5658 5669 1.685355 TAATGCTGCGGCTAGGCTCA 61.685 55.000 20.27 11.91 39.59 4.26
5811 5822 2.253758 GCAAGTCAACAGCGAGGCA 61.254 57.895 0.00 0.00 0.00 4.75
5949 5960 7.040892 CCAATAGATGTTGAATCCACCATAGTG 60.041 40.741 0.00 0.00 44.12 2.74
6112 6123 2.192664 TTTGCATCCGTAGAAAGGCA 57.807 45.000 0.00 0.00 0.00 4.75
6366 6377 5.473504 GCAGTCCAAGAAAAAGATTACCTCA 59.526 40.000 0.00 0.00 0.00 3.86
6384 6395 8.677300 TGAAAGAATAATCAATAACTGCAGTCC 58.323 33.333 21.95 0.00 0.00 3.85
6435 6446 0.036199 GGGCAAAAATGCATGCTCCA 60.036 50.000 20.33 0.00 42.20 3.86
6436 6447 0.251073 AGGGCAAAAATGCATGCTCC 59.749 50.000 20.33 7.63 44.24 4.70
6438 6449 0.978151 TGAGGGCAAAAATGCATGCT 59.022 45.000 20.33 1.07 42.20 3.79
6467 6478 4.021544 GGTTGTGGTAATGCAAGGAAATCA 60.022 41.667 0.00 0.00 0.00 2.57
6468 6479 4.021544 TGGTTGTGGTAATGCAAGGAAATC 60.022 41.667 0.00 0.00 0.00 2.17
6469 6480 3.900601 TGGTTGTGGTAATGCAAGGAAAT 59.099 39.130 0.00 0.00 0.00 2.17
6473 6484 3.368323 GGAATGGTTGTGGTAATGCAAGG 60.368 47.826 0.00 0.00 0.00 3.61
6479 6490 5.899278 AGGTAAAGGAATGGTTGTGGTAAT 58.101 37.500 0.00 0.00 0.00 1.89
6480 6491 5.327737 AGGTAAAGGAATGGTTGTGGTAA 57.672 39.130 0.00 0.00 0.00 2.85
6481 6492 5.073965 AGAAGGTAAAGGAATGGTTGTGGTA 59.926 40.000 0.00 0.00 0.00 3.25
6482 6493 3.895704 AGGTAAAGGAATGGTTGTGGT 57.104 42.857 0.00 0.00 0.00 4.16
6483 6494 4.407365 AGAAGGTAAAGGAATGGTTGTGG 58.593 43.478 0.00 0.00 0.00 4.17
6484 6495 5.070001 TGAGAAGGTAAAGGAATGGTTGTG 58.930 41.667 0.00 0.00 0.00 3.33
6485 6496 5.316987 CTGAGAAGGTAAAGGAATGGTTGT 58.683 41.667 0.00 0.00 0.00 3.32
6486 6497 4.156739 GCTGAGAAGGTAAAGGAATGGTTG 59.843 45.833 0.00 0.00 0.00 3.77
6487 6498 4.336280 GCTGAGAAGGTAAAGGAATGGTT 58.664 43.478 0.00 0.00 0.00 3.67
6488 6499 3.308473 GGCTGAGAAGGTAAAGGAATGGT 60.308 47.826 0.00 0.00 0.00 3.55
6489 6500 3.282885 GGCTGAGAAGGTAAAGGAATGG 58.717 50.000 0.00 0.00 0.00 3.16
6490 6501 3.955471 TGGCTGAGAAGGTAAAGGAATG 58.045 45.455 0.00 0.00 0.00 2.67
6491 6502 4.289672 TCTTGGCTGAGAAGGTAAAGGAAT 59.710 41.667 0.00 0.00 0.00 3.01
6492 6503 3.650942 TCTTGGCTGAGAAGGTAAAGGAA 59.349 43.478 0.00 0.00 0.00 3.36
6493 6504 3.008049 GTCTTGGCTGAGAAGGTAAAGGA 59.992 47.826 0.00 0.00 0.00 3.36
6494 6505 3.339141 GTCTTGGCTGAGAAGGTAAAGG 58.661 50.000 0.00 0.00 0.00 3.11
6495 6506 2.996621 CGTCTTGGCTGAGAAGGTAAAG 59.003 50.000 0.00 0.00 0.00 1.85
6496 6507 2.367567 ACGTCTTGGCTGAGAAGGTAAA 59.632 45.455 8.57 0.00 30.69 2.01
6497 6508 1.968493 ACGTCTTGGCTGAGAAGGTAA 59.032 47.619 8.57 0.00 30.69 2.85
6498 6509 1.629043 ACGTCTTGGCTGAGAAGGTA 58.371 50.000 8.57 0.00 30.69 3.08
6499 6510 0.759346 AACGTCTTGGCTGAGAAGGT 59.241 50.000 0.00 0.68 30.69 3.50
6500 6511 1.532868 CAAACGTCTTGGCTGAGAAGG 59.467 52.381 0.00 1.34 30.69 3.46
6501 6512 2.032549 CACAAACGTCTTGGCTGAGAAG 60.033 50.000 12.79 3.72 0.00 2.85
6502 6513 1.939934 CACAAACGTCTTGGCTGAGAA 59.060 47.619 12.79 0.00 0.00 2.87
6503 6514 1.134521 ACACAAACGTCTTGGCTGAGA 60.135 47.619 12.79 0.00 0.00 3.27
6504 6515 1.261619 GACACAAACGTCTTGGCTGAG 59.738 52.381 12.79 0.00 32.92 3.35
6505 6516 1.295792 GACACAAACGTCTTGGCTGA 58.704 50.000 12.79 0.00 32.92 4.26
6506 6517 1.003545 CTGACACAAACGTCTTGGCTG 60.004 52.381 12.79 3.32 36.82 4.85
6507 6518 1.299541 CTGACACAAACGTCTTGGCT 58.700 50.000 12.79 0.86 36.82 4.75
6508 6519 1.014352 ACTGACACAAACGTCTTGGC 58.986 50.000 12.79 3.34 36.82 4.52
6509 6520 3.869246 ACTAACTGACACAAACGTCTTGG 59.131 43.478 12.79 6.48 36.82 3.61
6512 6523 3.181493 ACGACTAACTGACACAAACGTCT 60.181 43.478 0.00 0.00 36.82 4.18
6529 6540 2.936498 CTGTTGTGGTTTGAGAACGACT 59.064 45.455 0.00 0.00 42.75 4.18
6572 6583 9.935682 ATGCAACTTCGTGAGTATAATAAAATG 57.064 29.630 0.00 0.00 37.72 2.32
6625 6636 4.899502 ACTGTAGAATCCCAGAAACACAG 58.100 43.478 4.79 0.00 38.44 3.66
6646 6657 1.725164 GTGTCGGCTGTAACTTGCTAC 59.275 52.381 0.00 0.00 0.00 3.58
6649 6660 0.941542 TTGTGTCGGCTGTAACTTGC 59.058 50.000 0.00 0.00 0.00 4.01
6675 6686 3.389329 AGAAGATCTCACACCACACTTGT 59.611 43.478 0.00 0.00 0.00 3.16
6700 6711 2.466846 AGGAAAGGCCAACAAGTTTGT 58.533 42.857 5.01 0.00 44.72 2.83
6772 6783 3.525537 CACAGTCGCTGAGTTGGAATAT 58.474 45.455 12.77 0.00 35.18 1.28
6897 6909 0.803380 GCATTGTTCCGAAGCCATGC 60.803 55.000 4.22 4.22 0.00 4.06
6905 6917 5.276461 AGTACTCATATGCATTGTTCCGA 57.724 39.130 3.54 0.00 0.00 4.55
6906 6918 5.741425 CAAGTACTCATATGCATTGTTCCG 58.259 41.667 3.54 0.00 0.00 4.30
6920 6932 7.494625 GGCACAAATACTATAAGCAAGTACTCA 59.505 37.037 0.00 0.00 32.47 3.41
6929 6941 5.611374 TCCTCTGGCACAAATACTATAAGC 58.389 41.667 0.00 0.00 38.70 3.09
6945 6957 3.349927 TCAAATGCTGAACATCCTCTGG 58.650 45.455 0.00 0.00 38.34 3.86
6948 6960 4.110482 GCAATCAAATGCTGAACATCCTC 58.890 43.478 0.00 0.00 43.06 3.71
6984 6998 3.665323 GCATACACTTCTGAACTTGCACG 60.665 47.826 0.00 0.00 0.00 5.34
7006 7020 6.485313 TCACTATTCCACAAAACAAGTACCAG 59.515 38.462 0.00 0.00 0.00 4.00
7007 7021 6.358178 TCACTATTCCACAAAACAAGTACCA 58.642 36.000 0.00 0.00 0.00 3.25
7008 7022 6.870971 TCACTATTCCACAAAACAAGTACC 57.129 37.500 0.00 0.00 0.00 3.34
7046 7061 8.870075 AAAGGAAGCTTTTACAGTGAGAATAT 57.130 30.769 0.00 0.00 0.00 1.28
7048 7063 7.588497 AAAAGGAAGCTTTTACAGTGAGAAT 57.412 32.000 0.00 0.00 35.09 2.40
7050 7065 8.691661 AATAAAAGGAAGCTTTTACAGTGAGA 57.308 30.769 0.00 0.00 40.28 3.27
7063 7084 7.939588 AGGATGGACTACATAATAAAAGGAAGC 59.060 37.037 0.00 0.00 40.72 3.86
7072 7093 9.837681 TTCTGGATTAGGATGGACTACATAATA 57.162 33.333 0.00 0.00 40.72 0.98
7073 7094 8.742125 TTCTGGATTAGGATGGACTACATAAT 57.258 34.615 0.00 0.00 40.72 1.28
7075 7096 7.310671 GCATTCTGGATTAGGATGGACTACATA 60.311 40.741 0.00 0.00 41.92 2.29
7076 7097 6.521427 GCATTCTGGATTAGGATGGACTACAT 60.521 42.308 0.00 0.00 41.92 2.29
7077 7098 5.221722 GCATTCTGGATTAGGATGGACTACA 60.222 44.000 0.00 0.00 41.92 2.74
7078 7099 5.012561 AGCATTCTGGATTAGGATGGACTAC 59.987 44.000 0.00 0.00 41.92 2.73
7079 7100 5.158141 AGCATTCTGGATTAGGATGGACTA 58.842 41.667 0.00 0.00 41.92 2.59
7080 7101 3.979347 AGCATTCTGGATTAGGATGGACT 59.021 43.478 0.00 0.00 41.92 3.85
7081 7102 4.363991 AGCATTCTGGATTAGGATGGAC 57.636 45.455 0.00 0.00 41.92 4.02
7082 7103 6.708885 ATTAGCATTCTGGATTAGGATGGA 57.291 37.500 0.00 0.00 41.92 3.41
7083 7104 8.868522 TTAATTAGCATTCTGGATTAGGATGG 57.131 34.615 0.00 0.00 41.92 3.51
7101 7122 4.780815 TCCTGGTGATGTGGCTTAATTAG 58.219 43.478 0.00 0.00 0.00 1.73
7102 7123 4.853468 TCCTGGTGATGTGGCTTAATTA 57.147 40.909 0.00 0.00 0.00 1.40
7103 7124 3.737559 TCCTGGTGATGTGGCTTAATT 57.262 42.857 0.00 0.00 0.00 1.40
7104 7125 3.356290 GTTCCTGGTGATGTGGCTTAAT 58.644 45.455 0.00 0.00 0.00 1.40
7105 7126 2.554344 GGTTCCTGGTGATGTGGCTTAA 60.554 50.000 0.00 0.00 0.00 1.85
7106 7127 1.004277 GGTTCCTGGTGATGTGGCTTA 59.996 52.381 0.00 0.00 0.00 3.09
7107 7128 0.251341 GGTTCCTGGTGATGTGGCTT 60.251 55.000 0.00 0.00 0.00 4.35
7108 7129 1.380302 GGTTCCTGGTGATGTGGCT 59.620 57.895 0.00 0.00 0.00 4.75
7109 7130 0.323725 ATGGTTCCTGGTGATGTGGC 60.324 55.000 0.00 0.00 0.00 5.01
7110 7131 3.016736 GTTATGGTTCCTGGTGATGTGG 58.983 50.000 0.00 0.00 0.00 4.17
7111 7132 3.016736 GGTTATGGTTCCTGGTGATGTG 58.983 50.000 0.00 0.00 0.00 3.21
7112 7133 2.647299 TGGTTATGGTTCCTGGTGATGT 59.353 45.455 0.00 0.00 0.00 3.06
7113 7134 3.364460 TGGTTATGGTTCCTGGTGATG 57.636 47.619 0.00 0.00 0.00 3.07
7114 7135 4.608170 AATGGTTATGGTTCCTGGTGAT 57.392 40.909 0.00 0.00 0.00 3.06
7115 7136 4.080015 CCTAATGGTTATGGTTCCTGGTGA 60.080 45.833 0.00 0.00 0.00 4.02
7116 7137 4.207165 CCTAATGGTTATGGTTCCTGGTG 58.793 47.826 0.00 0.00 0.00 4.17
7117 7138 3.856206 ACCTAATGGTTATGGTTCCTGGT 59.144 43.478 0.00 0.00 46.05 4.00
7118 7139 4.519906 ACCTAATGGTTATGGTTCCTGG 57.480 45.455 0.00 0.00 46.05 4.45
7130 7151 7.580688 TCAATATGTGAAGTTCGACCTAATGGT 60.581 37.037 0.00 0.00 40.83 3.55
7131 7152 6.761242 TCAATATGTGAAGTTCGACCTAATGG 59.239 38.462 0.00 0.00 34.31 3.16
7132 7153 7.254455 GGTCAATATGTGAAGTTCGACCTAATG 60.254 40.741 13.52 7.52 38.23 1.90
7133 7154 6.761714 GGTCAATATGTGAAGTTCGACCTAAT 59.238 38.462 13.52 1.60 38.23 1.73
7134 7155 6.103997 GGTCAATATGTGAAGTTCGACCTAA 58.896 40.000 13.52 0.00 38.23 2.69
7135 7156 5.394883 GGGTCAATATGTGAAGTTCGACCTA 60.395 44.000 17.79 7.79 41.16 3.08
7136 7157 4.504858 GGTCAATATGTGAAGTTCGACCT 58.495 43.478 13.52 0.00 38.23 3.85
7137 7158 3.621715 GGGTCAATATGTGAAGTTCGACC 59.378 47.826 12.77 12.77 38.23 4.79
7138 7159 4.504858 AGGGTCAATATGTGAAGTTCGAC 58.495 43.478 0.00 0.00 38.23 4.20
7139 7160 4.819105 AGGGTCAATATGTGAAGTTCGA 57.181 40.909 0.00 0.00 38.23 3.71
7140 7161 5.880054 AAAGGGTCAATATGTGAAGTTCG 57.120 39.130 0.00 0.00 38.23 3.95
7141 7162 6.148811 TCGAAAAGGGTCAATATGTGAAGTTC 59.851 38.462 0.00 0.00 38.23 3.01
7142 7163 6.001460 TCGAAAAGGGTCAATATGTGAAGTT 58.999 36.000 0.00 0.00 38.23 2.66
7143 7164 5.556915 TCGAAAAGGGTCAATATGTGAAGT 58.443 37.500 0.00 0.00 38.23 3.01
7144 7165 6.540189 AGATCGAAAAGGGTCAATATGTGAAG 59.460 38.462 0.00 0.00 38.23 3.02
7145 7166 6.316140 CAGATCGAAAAGGGTCAATATGTGAA 59.684 38.462 0.00 0.00 38.23 3.18
7146 7167 5.817296 CAGATCGAAAAGGGTCAATATGTGA 59.183 40.000 0.00 0.00 0.00 3.58
7147 7168 5.817296 TCAGATCGAAAAGGGTCAATATGTG 59.183 40.000 0.00 0.00 0.00 3.21
7148 7169 5.989477 TCAGATCGAAAAGGGTCAATATGT 58.011 37.500 0.00 0.00 0.00 2.29
7149 7170 6.484643 ACATCAGATCGAAAAGGGTCAATATG 59.515 38.462 0.00 0.00 0.00 1.78
7150 7171 6.595682 ACATCAGATCGAAAAGGGTCAATAT 58.404 36.000 0.00 0.00 0.00 1.28
7151 7172 5.989477 ACATCAGATCGAAAAGGGTCAATA 58.011 37.500 0.00 0.00 0.00 1.90
7152 7173 4.848357 ACATCAGATCGAAAAGGGTCAAT 58.152 39.130 0.00 0.00 0.00 2.57
7153 7174 4.286297 ACATCAGATCGAAAAGGGTCAA 57.714 40.909 0.00 0.00 0.00 3.18
7154 7175 3.981071 ACATCAGATCGAAAAGGGTCA 57.019 42.857 0.00 0.00 0.00 4.02
7155 7176 5.012328 AGTACATCAGATCGAAAAGGGTC 57.988 43.478 0.00 0.00 0.00 4.46
7156 7177 5.178797 CAAGTACATCAGATCGAAAAGGGT 58.821 41.667 0.00 0.00 0.00 4.34
7157 7178 4.034510 GCAAGTACATCAGATCGAAAAGGG 59.965 45.833 0.00 0.00 0.00 3.95
7158 7179 4.259970 CGCAAGTACATCAGATCGAAAAGG 60.260 45.833 0.00 0.00 0.00 3.11
7159 7180 4.562789 TCGCAAGTACATCAGATCGAAAAG 59.437 41.667 0.00 0.00 39.48 2.27
7160 7181 4.326278 GTCGCAAGTACATCAGATCGAAAA 59.674 41.667 0.00 0.00 39.48 2.29
7161 7182 3.857665 GTCGCAAGTACATCAGATCGAAA 59.142 43.478 0.00 0.00 39.48 3.46
7162 7183 3.128764 AGTCGCAAGTACATCAGATCGAA 59.871 43.478 0.00 0.00 39.48 3.71
7163 7184 2.683362 AGTCGCAAGTACATCAGATCGA 59.317 45.455 0.00 0.00 39.48 3.59
7164 7185 2.786027 CAGTCGCAAGTACATCAGATCG 59.214 50.000 0.00 0.00 39.48 3.69
7165 7186 4.033990 TCAGTCGCAAGTACATCAGATC 57.966 45.455 0.00 0.00 39.48 2.75
7166 7187 3.696548 TCTCAGTCGCAAGTACATCAGAT 59.303 43.478 0.00 0.00 39.48 2.90
7167 7188 3.081804 TCTCAGTCGCAAGTACATCAGA 58.918 45.455 0.00 0.00 39.48 3.27
7168 7189 3.127721 TCTCTCAGTCGCAAGTACATCAG 59.872 47.826 0.00 0.00 39.48 2.90
7169 7190 3.081804 TCTCTCAGTCGCAAGTACATCA 58.918 45.455 0.00 0.00 39.48 3.07
7170 7191 3.127895 AGTCTCTCAGTCGCAAGTACATC 59.872 47.826 0.00 0.00 39.48 3.06
7171 7192 3.085533 AGTCTCTCAGTCGCAAGTACAT 58.914 45.455 0.00 0.00 39.48 2.29
7172 7193 2.505405 AGTCTCTCAGTCGCAAGTACA 58.495 47.619 0.00 0.00 39.48 2.90
7173 7194 3.058155 TCAAGTCTCTCAGTCGCAAGTAC 60.058 47.826 0.00 0.00 39.48 2.73
7174 7195 3.146847 TCAAGTCTCTCAGTCGCAAGTA 58.853 45.455 0.00 0.00 39.48 2.24
7175 7196 1.957177 TCAAGTCTCTCAGTCGCAAGT 59.043 47.619 0.00 0.00 39.48 3.16
7176 7197 2.713895 TCAAGTCTCTCAGTCGCAAG 57.286 50.000 0.00 0.00 0.00 4.01
7177 7198 3.320626 CAATCAAGTCTCTCAGTCGCAA 58.679 45.455 0.00 0.00 0.00 4.85
7178 7199 2.353109 CCAATCAAGTCTCTCAGTCGCA 60.353 50.000 0.00 0.00 0.00 5.10
7179 7200 2.094494 TCCAATCAAGTCTCTCAGTCGC 60.094 50.000 0.00 0.00 0.00 5.19
7180 7201 3.057245 TGTCCAATCAAGTCTCTCAGTCG 60.057 47.826 0.00 0.00 0.00 4.18
7181 7202 4.021544 AGTGTCCAATCAAGTCTCTCAGTC 60.022 45.833 0.00 0.00 0.00 3.51
7182 7203 3.900601 AGTGTCCAATCAAGTCTCTCAGT 59.099 43.478 0.00 0.00 0.00 3.41
7183 7204 4.533919 AGTGTCCAATCAAGTCTCTCAG 57.466 45.455 0.00 0.00 0.00 3.35
7184 7205 4.963318 AAGTGTCCAATCAAGTCTCTCA 57.037 40.909 0.00 0.00 0.00 3.27
7185 7206 5.046950 ACCTAAGTGTCCAATCAAGTCTCTC 60.047 44.000 0.00 0.00 0.00 3.20
7186 7207 4.841246 ACCTAAGTGTCCAATCAAGTCTCT 59.159 41.667 0.00 0.00 0.00 3.10
7187 7208 5.153950 ACCTAAGTGTCCAATCAAGTCTC 57.846 43.478 0.00 0.00 0.00 3.36
7188 7209 6.681729 TTACCTAAGTGTCCAATCAAGTCT 57.318 37.500 0.00 0.00 0.00 3.24
7189 7210 7.739498 TTTTACCTAAGTGTCCAATCAAGTC 57.261 36.000 0.00 0.00 0.00 3.01
7190 7211 7.942341 TCATTTTACCTAAGTGTCCAATCAAGT 59.058 33.333 0.00 0.00 0.00 3.16
7191 7212 8.335532 TCATTTTACCTAAGTGTCCAATCAAG 57.664 34.615 0.00 0.00 0.00 3.02
7192 7213 8.739039 CATCATTTTACCTAAGTGTCCAATCAA 58.261 33.333 0.00 0.00 0.00 2.57
7193 7214 8.106462 TCATCATTTTACCTAAGTGTCCAATCA 58.894 33.333 0.00 0.00 0.00 2.57
7194 7215 8.506168 TCATCATTTTACCTAAGTGTCCAATC 57.494 34.615 0.00 0.00 0.00 2.67
7195 7216 8.328758 TCTCATCATTTTACCTAAGTGTCCAAT 58.671 33.333 0.00 0.00 0.00 3.16
7196 7217 7.685481 TCTCATCATTTTACCTAAGTGTCCAA 58.315 34.615 0.00 0.00 0.00 3.53
7197 7218 7.252612 TCTCATCATTTTACCTAAGTGTCCA 57.747 36.000 0.00 0.00 0.00 4.02
7198 7219 8.738645 ATTCTCATCATTTTACCTAAGTGTCC 57.261 34.615 0.00 0.00 0.00 4.02
7210 7231 9.927668 AACCGTTTCATAAATTCTCATCATTTT 57.072 25.926 0.00 0.00 0.00 1.82
7211 7232 9.573133 GAACCGTTTCATAAATTCTCATCATTT 57.427 29.630 0.00 0.00 0.00 2.32
7212 7233 8.190784 GGAACCGTTTCATAAATTCTCATCATT 58.809 33.333 0.00 0.00 32.80 2.57
7213 7234 7.201821 GGGAACCGTTTCATAAATTCTCATCAT 60.202 37.037 0.00 0.00 40.86 2.45
7214 7235 6.094881 GGGAACCGTTTCATAAATTCTCATCA 59.905 38.462 0.00 0.00 40.86 3.07
7215 7236 6.495706 GGGAACCGTTTCATAAATTCTCATC 58.504 40.000 0.00 0.00 40.86 2.92
7216 7237 6.451064 GGGAACCGTTTCATAAATTCTCAT 57.549 37.500 0.00 0.00 40.86 2.90
7217 7238 5.890424 GGGAACCGTTTCATAAATTCTCA 57.110 39.130 0.00 0.00 40.86 3.27
7256 7277 5.765182 CAGAGGATGTCACTACCAAGTTTTT 59.235 40.000 0.00 0.00 31.97 1.94
7257 7278 5.163195 ACAGAGGATGTCACTACCAAGTTTT 60.163 40.000 0.00 0.00 37.75 2.43
7258 7279 4.348168 ACAGAGGATGTCACTACCAAGTTT 59.652 41.667 0.00 0.00 37.75 2.66
7259 7280 3.904339 ACAGAGGATGTCACTACCAAGTT 59.096 43.478 0.00 0.00 37.75 2.66
7260 7281 3.259374 CACAGAGGATGTCACTACCAAGT 59.741 47.826 0.00 0.00 41.41 3.16
7261 7282 3.511540 TCACAGAGGATGTCACTACCAAG 59.488 47.826 0.00 0.00 41.41 3.61
7262 7283 3.258372 GTCACAGAGGATGTCACTACCAA 59.742 47.826 0.00 0.00 41.41 3.67
7263 7284 2.826128 GTCACAGAGGATGTCACTACCA 59.174 50.000 0.00 0.00 41.41 3.25
7264 7285 2.826128 TGTCACAGAGGATGTCACTACC 59.174 50.000 0.00 0.00 41.41 3.18
7265 7286 4.428209 CATGTCACAGAGGATGTCACTAC 58.572 47.826 0.00 0.00 41.41 2.73
7266 7287 3.448660 CCATGTCACAGAGGATGTCACTA 59.551 47.826 0.00 0.00 41.41 2.74
7267 7288 2.235650 CCATGTCACAGAGGATGTCACT 59.764 50.000 0.00 0.00 41.41 3.41
7268 7289 2.625737 CCATGTCACAGAGGATGTCAC 58.374 52.381 0.00 0.00 41.41 3.67
7269 7290 1.556451 CCCATGTCACAGAGGATGTCA 59.444 52.381 0.58 0.00 41.41 3.58
7270 7291 1.556911 ACCCATGTCACAGAGGATGTC 59.443 52.381 2.86 0.00 41.41 3.06
7271 7292 1.280133 CACCCATGTCACAGAGGATGT 59.720 52.381 2.86 0.00 45.43 3.06
7272 7293 1.556451 TCACCCATGTCACAGAGGATG 59.444 52.381 2.86 0.00 0.00 3.51
7273 7294 1.956869 TCACCCATGTCACAGAGGAT 58.043 50.000 2.86 0.00 0.00 3.24
7274 7295 1.956869 ATCACCCATGTCACAGAGGA 58.043 50.000 2.86 0.00 0.00 3.71
7275 7296 4.428294 AATATCACCCATGTCACAGAGG 57.572 45.455 0.00 0.00 0.00 3.69
7276 7297 5.163311 TGGTAATATCACCCATGTCACAGAG 60.163 44.000 0.00 0.00 37.84 3.35
7277 7298 4.719273 TGGTAATATCACCCATGTCACAGA 59.281 41.667 0.00 0.00 37.84 3.41
7278 7299 5.034852 TGGTAATATCACCCATGTCACAG 57.965 43.478 0.00 0.00 37.84 3.66
7279 7300 5.645056 ATGGTAATATCACCCATGTCACA 57.355 39.130 0.00 0.00 37.58 3.58
7280 7301 6.959639 AAATGGTAATATCACCCATGTCAC 57.040 37.500 0.00 0.00 38.93 3.67
7281 7302 7.001674 GGTAAATGGTAATATCACCCATGTCA 58.998 38.462 0.00 0.00 38.93 3.58
7282 7303 7.001674 TGGTAAATGGTAATATCACCCATGTC 58.998 38.462 0.00 0.00 38.93 3.06
7283 7304 6.916909 TGGTAAATGGTAATATCACCCATGT 58.083 36.000 0.00 0.00 38.93 3.21
7284 7305 7.831691 TTGGTAAATGGTAATATCACCCATG 57.168 36.000 0.00 0.00 38.93 3.66
7294 7315 9.810545 CGTCCAAAATAATTGGTAAATGGTAAT 57.189 29.630 7.07 0.00 40.40 1.89
7295 7316 8.251721 CCGTCCAAAATAATTGGTAAATGGTAA 58.748 33.333 7.07 0.00 40.40 2.85
7296 7317 7.614583 TCCGTCCAAAATAATTGGTAAATGGTA 59.385 33.333 7.07 0.00 40.40 3.25
7297 7318 6.437793 TCCGTCCAAAATAATTGGTAAATGGT 59.562 34.615 7.07 0.00 40.40 3.55
7298 7319 6.868622 TCCGTCCAAAATAATTGGTAAATGG 58.131 36.000 7.07 3.82 40.40 3.16
7299 7320 8.940768 ATTCCGTCCAAAATAATTGGTAAATG 57.059 30.769 7.07 0.00 40.40 2.32
7300 7321 9.952030 AAATTCCGTCCAAAATAATTGGTAAAT 57.048 25.926 7.07 1.79 40.40 1.40
7301 7322 9.209175 CAAATTCCGTCCAAAATAATTGGTAAA 57.791 29.630 7.07 0.00 40.40 2.01
7302 7323 8.368668 ACAAATTCCGTCCAAAATAATTGGTAA 58.631 29.630 7.07 0.06 40.40 2.85
7303 7324 7.897864 ACAAATTCCGTCCAAAATAATTGGTA 58.102 30.769 7.07 0.00 40.40 3.25
7304 7325 6.764379 ACAAATTCCGTCCAAAATAATTGGT 58.236 32.000 7.07 0.00 40.40 3.67
7305 7326 7.665561 AACAAATTCCGTCCAAAATAATTGG 57.334 32.000 0.71 0.71 40.87 3.16
7306 7327 8.987890 AGAAACAAATTCCGTCCAAAATAATTG 58.012 29.630 0.00 0.00 38.94 2.32
7308 7329 9.634163 GTAGAAACAAATTCCGTCCAAAATAAT 57.366 29.630 0.00 0.00 38.94 1.28
7311 7332 7.145323 CAGTAGAAACAAATTCCGTCCAAAAT 58.855 34.615 0.00 0.00 38.94 1.82
7318 7339 3.880490 TGCACAGTAGAAACAAATTCCGT 59.120 39.130 0.00 0.00 38.94 4.69
7319 7340 4.219033 GTGCACAGTAGAAACAAATTCCG 58.781 43.478 13.17 0.00 38.94 4.30
7517 7538 0.254747 TCCGGGTTTGGATGGATGAC 59.745 55.000 0.00 0.00 31.53 3.06
7688 7709 1.747924 CGAGCAGAGGAGAACATCTCA 59.252 52.381 9.40 0.00 45.12 3.27
7733 7754 2.289002 GTCTGAATCATCATCGGTTGGC 59.711 50.000 0.00 0.00 34.37 4.52
7739 7760 1.341209 TCCGGGTCTGAATCATCATCG 59.659 52.381 0.00 0.00 34.37 3.84
7748 7769 0.687757 CTCCATCCTCCGGGTCTGAA 60.688 60.000 0.00 0.00 0.00 3.02
7751 7772 2.283809 CCTCCATCCTCCGGGTCT 59.716 66.667 0.00 0.00 0.00 3.85
7773 7794 0.182775 TCGTCATCATCCTCCTCCGA 59.817 55.000 0.00 0.00 0.00 4.55
7781 7802 0.924363 CGTCGTCGTCGTCATCATCC 60.924 60.000 3.67 0.00 38.33 3.51
7784 7805 1.131218 GTCGTCGTCGTCGTCATCA 59.869 57.895 11.41 0.00 38.33 3.07
7790 7811 3.473166 TCCGAGTCGTCGTCGTCG 61.473 66.667 12.31 5.50 45.30 5.12
7823 7844 1.450642 GAGCCCTAAATCGGTCCCC 59.549 63.158 0.00 0.00 0.00 4.81
7841 7862 1.141881 CTCAGAATCCGTGTCCCCG 59.858 63.158 0.00 0.00 0.00 5.73
7868 7889 0.109458 CGTCACCGCTGCTGTTACTA 60.109 55.000 6.89 0.00 0.00 1.82
7886 7907 2.104132 TCATCGTCACCGCCATCG 59.896 61.111 0.00 0.00 0.00 3.84
7904 7925 1.537638 CTGTCCATATCCTCCTCGTCG 59.462 57.143 0.00 0.00 0.00 5.12
7925 7946 0.650512 CATCGTCGTTTTCATCCCCG 59.349 55.000 0.00 0.00 0.00 5.73
7943 7964 1.489481 AGTCGCCTTCCTCATCATCA 58.511 50.000 0.00 0.00 0.00 3.07
8003 8024 0.611896 TGTCACTCTCATCGCCCTCA 60.612 55.000 0.00 0.00 0.00 3.86
8006 8027 0.461548 TCATGTCACTCTCATCGCCC 59.538 55.000 0.00 0.00 0.00 6.13
8009 8030 3.003171 ACTCGATCATGTCACTCTCATCG 59.997 47.826 3.50 3.50 0.00 3.84
8027 8051 2.507992 CCGCTGCTGAAGGACTCG 60.508 66.667 0.00 0.00 0.00 4.18
8051 8075 0.617413 CTCACATGAGCCACCCTTCT 59.383 55.000 0.00 0.00 35.13 2.85
8128 8152 4.408821 TCCTGCATCCCCACGTGC 62.409 66.667 10.91 0.00 41.61 5.34
8130 8154 3.402681 CCTCCTGCATCCCCACGT 61.403 66.667 0.00 0.00 0.00 4.49
8209 8239 1.761784 TGCATTTCTTGTTTGCACCCT 59.238 42.857 0.00 0.00 41.18 4.34
8210 8240 2.237393 TGCATTTCTTGTTTGCACCC 57.763 45.000 0.00 0.00 41.18 4.61
8211 8241 4.512571 AGATTTGCATTTCTTGTTTGCACC 59.487 37.500 0.00 0.00 45.35 5.01
8212 8242 5.006941 ACAGATTTGCATTTCTTGTTTGCAC 59.993 36.000 0.00 0.00 45.35 4.57
8213 8243 5.117584 ACAGATTTGCATTTCTTGTTTGCA 58.882 33.333 0.00 0.00 44.12 4.08
8222 8252 4.340894 TGAGCGTACAGATTTGCATTTC 57.659 40.909 0.00 0.00 0.00 2.17
8246 8276 7.714813 GCAAGGCCAATAATTTACAACCATAAT 59.285 33.333 5.01 0.00 0.00 1.28
8250 8280 4.530161 AGCAAGGCCAATAATTTACAACCA 59.470 37.500 5.01 0.00 0.00 3.67
8251 8281 4.869861 CAGCAAGGCCAATAATTTACAACC 59.130 41.667 5.01 0.00 0.00 3.77
8265 8295 2.044551 CTTCCTCCCAGCAAGGCC 60.045 66.667 0.00 0.00 35.39 5.19
8272 8302 3.248266 CGTAACGTAAACTTCCTCCCAG 58.752 50.000 0.00 0.00 0.00 4.45
8279 8309 4.267452 TCCAACACACGTAACGTAAACTTC 59.733 41.667 0.00 0.00 38.32 3.01
8296 8326 4.131596 GGTAACAACAGCTACTTCCAACA 58.868 43.478 0.00 0.00 0.00 3.33
8302 8332 4.344102 TCTCACAGGTAACAACAGCTACTT 59.656 41.667 0.00 0.00 41.41 2.24
8370 8403 6.321181 TGAGAAACAGTGAAAAATTACCAGCT 59.679 34.615 0.00 0.00 0.00 4.24
8385 8418 6.391227 AATTTTCAACCGATGAGAAACAGT 57.609 33.333 0.00 0.00 39.77 3.55
8440 8473 6.967199 CAGTAAAAAGGAACACAACTCTTCAC 59.033 38.462 0.00 0.00 0.00 3.18
8450 8483 7.916977 ACCGAAATAAACAGTAAAAAGGAACAC 59.083 33.333 0.00 0.00 0.00 3.32
8624 8663 9.178758 CTAAGCTTAAGACACTTATTTTGGGAT 57.821 33.333 6.67 0.00 0.00 3.85
8626 8665 8.336801 ACTAAGCTTAAGACACTTATTTTGGG 57.663 34.615 6.67 0.00 0.00 4.12
8640 8679 9.444600 TCCCAAAATAAGTGTACTAAGCTTAAG 57.555 33.333 7.74 0.00 0.00 1.85
8643 8682 6.370718 CGTCCCAAAATAAGTGTACTAAGCTT 59.629 38.462 3.48 3.48 0.00 3.74
8644 8683 5.873164 CGTCCCAAAATAAGTGTACTAAGCT 59.127 40.000 0.00 0.00 0.00 3.74
8645 8684 5.064325 CCGTCCCAAAATAAGTGTACTAAGC 59.936 44.000 0.00 0.00 0.00 3.09
8646 8685 6.400568 TCCGTCCCAAAATAAGTGTACTAAG 58.599 40.000 0.00 0.00 0.00 2.18
8647 8686 6.357579 TCCGTCCCAAAATAAGTGTACTAA 57.642 37.500 0.00 0.00 0.00 2.24
8648 8687 5.105228 CCTCCGTCCCAAAATAAGTGTACTA 60.105 44.000 0.00 0.00 0.00 1.82
8649 8688 4.323257 CCTCCGTCCCAAAATAAGTGTACT 60.323 45.833 0.00 0.00 0.00 2.73
8650 8689 3.937079 CCTCCGTCCCAAAATAAGTGTAC 59.063 47.826 0.00 0.00 0.00 2.90
8652 8691 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
8653 8692 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
8654 8693 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
8655 8694 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
8656 8695 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
8662 8802 0.928505 TACATACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
8665 8805 4.765856 ACATACATACATACTCCCTCCGTC 59.234 45.833 0.00 0.00 0.00 4.79
8693 8836 1.781025 CGTCTCGCCTCTGCCTCTAG 61.781 65.000 0.00 0.00 0.00 2.43
8694 8837 1.820056 CGTCTCGCCTCTGCCTCTA 60.820 63.158 0.00 0.00 0.00 2.43
8695 8838 3.137459 CGTCTCGCCTCTGCCTCT 61.137 66.667 0.00 0.00 0.00 3.69
8696 8839 4.200283 CCGTCTCGCCTCTGCCTC 62.200 72.222 0.00 0.00 0.00 4.70
8714 8857 1.591594 ACGAATATGCCTCGCGTGG 60.592 57.895 22.48 22.48 39.97 4.94
8715 8858 1.559814 CACGAATATGCCTCGCGTG 59.440 57.895 5.77 2.75 44.78 5.34
8716 8859 0.179121 TTCACGAATATGCCTCGCGT 60.179 50.000 5.77 0.00 39.97 6.01
8717 8860 0.229753 GTTCACGAATATGCCTCGCG 59.770 55.000 0.00 0.00 39.97 5.87
8718 8861 1.286501 TGTTCACGAATATGCCTCGC 58.713 50.000 0.00 0.00 39.97 5.03
8719 8862 3.804325 AGAATGTTCACGAATATGCCTCG 59.196 43.478 0.00 0.00 42.06 4.63
8720 8863 5.741388 AAGAATGTTCACGAATATGCCTC 57.259 39.130 0.00 0.00 0.00 4.70
8721 8864 6.150976 TCAAAAGAATGTTCACGAATATGCCT 59.849 34.615 0.00 0.00 0.00 4.75
8723 8866 7.795431 TTCAAAAGAATGTTCACGAATATGC 57.205 32.000 0.00 0.00 0.00 3.14
8727 8870 7.479980 TGAGTTTCAAAAGAATGTTCACGAAT 58.520 30.769 0.00 0.00 0.00 3.34
8728 8871 6.847400 TGAGTTTCAAAAGAATGTTCACGAA 58.153 32.000 0.00 0.00 0.00 3.85
8729 8872 6.429791 TGAGTTTCAAAAGAATGTTCACGA 57.570 33.333 0.00 0.00 0.00 4.35
8730 8873 6.912051 TCATGAGTTTCAAAAGAATGTTCACG 59.088 34.615 0.00 0.00 0.00 4.35
8731 8874 8.534778 GTTCATGAGTTTCAAAAGAATGTTCAC 58.465 33.333 0.00 0.00 0.00 3.18
8732 8875 8.249638 TGTTCATGAGTTTCAAAAGAATGTTCA 58.750 29.630 0.00 0.00 0.00 3.18
8733 8876 8.633075 TGTTCATGAGTTTCAAAAGAATGTTC 57.367 30.769 0.00 0.00 0.00 3.18
8734 8877 9.603921 AATGTTCATGAGTTTCAAAAGAATGTT 57.396 25.926 0.00 0.00 0.00 2.71
8735 8878 9.603921 AAATGTTCATGAGTTTCAAAAGAATGT 57.396 25.926 0.00 0.00 0.00 2.71
8764 8907 8.553459 TTCAAAAAGTTGTTTGGCAATTCTAA 57.447 26.923 0.00 0.00 39.55 2.10
8765 8908 8.553459 TTTCAAAAAGTTGTTTGGCAATTCTA 57.447 26.923 0.00 0.00 39.55 2.10
8767 8910 8.686397 AATTTCAAAAAGTTGTTTGGCAATTC 57.314 26.923 0.00 0.00 39.55 2.17
8768 8911 8.923683 CAAATTTCAAAAAGTTGTTTGGCAATT 58.076 25.926 0.00 0.00 39.55 2.32
8769 8912 8.087136 ACAAATTTCAAAAAGTTGTTTGGCAAT 58.913 25.926 11.22 0.00 39.55 3.56
8771 8914 6.974965 ACAAATTTCAAAAAGTTGTTTGGCA 58.025 28.000 11.22 0.00 38.72 4.92
8772 8915 7.865875 AACAAATTTCAAAAAGTTGTTTGGC 57.134 28.000 19.37 0.00 37.11 4.52
8843 8986 9.719279 GAAAAATGTTCATGCATTTCAAAAAGA 57.281 25.926 10.52 0.00 45.17 2.52
8844 8987 9.504710 TGAAAAATGTTCATGCATTTCAAAAAG 57.495 25.926 10.52 0.00 45.17 2.27
8845 8988 9.850628 TTGAAAAATGTTCATGCATTTCAAAAA 57.149 22.222 14.82 0.00 45.17 1.94
8846 8989 9.850628 TTTGAAAAATGTTCATGCATTTCAAAA 57.149 22.222 21.81 11.56 45.17 2.44
8889 9032 7.022979 CGCTTCAAATATTGTTCACTGATTCA 58.977 34.615 0.00 0.00 0.00 2.57
8890 9033 6.470235 CCGCTTCAAATATTGTTCACTGATTC 59.530 38.462 0.00 0.00 0.00 2.52
8893 9036 4.759693 ACCGCTTCAAATATTGTTCACTGA 59.240 37.500 0.00 0.00 0.00 3.41
8894 9037 4.853196 CACCGCTTCAAATATTGTTCACTG 59.147 41.667 0.00 0.00 0.00 3.66
8896 9039 5.041951 TCACCGCTTCAAATATTGTTCAC 57.958 39.130 0.00 0.00 0.00 3.18
8897 9040 5.240623 AGTTCACCGCTTCAAATATTGTTCA 59.759 36.000 0.00 0.00 0.00 3.18
8898 9041 5.699839 AGTTCACCGCTTCAAATATTGTTC 58.300 37.500 0.00 0.00 0.00 3.18
8901 9044 7.406799 AAAAAGTTCACCGCTTCAAATATTG 57.593 32.000 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.