Multiple sequence alignment - TraesCS2B01G623900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G623900 chr2B 100.000 3620 0 0 1 3620 797263260 797259641 0.000000e+00 6685.0
1 TraesCS2B01G623900 chr2B 95.453 2243 81 10 450 2684 797234318 797232089 0.000000e+00 3557.0
2 TraesCS2B01G623900 chr2B 85.318 2561 256 68 853 3315 246264345 246261807 0.000000e+00 2536.0
3 TraesCS2B01G623900 chr2B 97.063 647 19 0 2668 3314 797232071 797231425 0.000000e+00 1090.0
4 TraesCS2B01G623900 chr2B 100.000 566 0 0 3721 4286 797259540 797258975 0.000000e+00 1046.0
5 TraesCS2B01G623900 chr2B 91.398 465 34 6 1 461 797235778 797235316 2.170000e-177 632.0
6 TraesCS2B01G623900 chr2B 95.098 306 15 0 3315 3620 797231380 797231075 2.320000e-132 483.0
7 TraesCS2B01G623900 chr2B 93.548 124 8 0 3945 4068 800214220 800214097 7.320000e-43 185.0
8 TraesCS2B01G623900 chr2B 87.324 142 15 1 3479 3620 246261641 246261503 4.440000e-35 159.0
9 TraesCS2B01G623900 chr2B 81.818 176 32 0 2791 2966 237642897 237643072 9.600000e-32 148.0
10 TraesCS2B01G623900 chr2B 79.592 147 26 4 2533 2677 237642610 237642754 7.580000e-18 102.0
11 TraesCS2B01G623900 chr2B 100.000 29 0 0 1619 1647 246367667 246367639 2.000000e-03 54.7
12 TraesCS2B01G623900 chrUn 99.081 1633 15 0 1988 3620 302673751 302675383 0.000000e+00 2933.0
13 TraesCS2B01G623900 chrUn 97.809 502 11 0 1367 1868 302673148 302673649 0.000000e+00 867.0
14 TraesCS2B01G623900 chrUn 94.903 412 14 3 960 1371 280179276 280179680 4.670000e-179 638.0
15 TraesCS2B01G623900 chrUn 89.069 494 46 7 145 634 280178599 280179088 1.320000e-169 606.0
16 TraesCS2B01G623900 chrUn 95.238 189 8 1 724 911 280179090 280179278 9.010000e-77 298.0
17 TraesCS2B01G623900 chrUn 97.143 35 1 0 3423 3457 24833465 24833499 4.630000e-05 60.2
18 TraesCS2B01G623900 chrUn 97.143 35 1 0 3423 3457 212860428 212860462 4.630000e-05 60.2
19 TraesCS2B01G623900 chr2A 93.783 1335 76 3 545 1872 763867316 763868650 0.000000e+00 1999.0
20 TraesCS2B01G623900 chr2A 88.525 1037 88 11 861 1881 203906249 203905228 0.000000e+00 1227.0
21 TraesCS2B01G623900 chr2A 86.300 1073 106 22 1977 3014 203905132 203904066 0.000000e+00 1129.0
22 TraesCS2B01G623900 chr2A 94.019 719 41 2 1988 2704 763868749 763869467 0.000000e+00 1088.0
23 TraesCS2B01G623900 chr2A 94.745 609 25 2 2709 3315 763869885 763870488 0.000000e+00 941.0
24 TraesCS2B01G623900 chr2A 89.027 483 49 4 4 483 763866838 763867319 2.850000e-166 595.0
25 TraesCS2B01G623900 chr2A 92.208 231 14 2 3085 3315 203903954 203903728 1.490000e-84 324.0
26 TraesCS2B01G623900 chr2A 80.064 311 59 2 470 779 432597716 432597408 1.200000e-55 228.0
27 TraesCS2B01G623900 chr2A 93.182 132 9 0 3489 3620 763870567 763870698 1.220000e-45 195.0
28 TraesCS2B01G623900 chr2A 86.014 143 15 3 3479 3620 203903568 203903430 9.600000e-32 148.0
29 TraesCS2B01G623900 chr2A 100.000 37 0 0 3050 3086 199801101 199801065 7.690000e-08 69.4
30 TraesCS2B01G623900 chr2A 94.872 39 2 0 1874 1912 763868690 763868728 1.290000e-05 62.1
31 TraesCS2B01G623900 chr2D 96.759 1080 32 1 793 1872 638342031 638340955 0.000000e+00 1797.0
32 TraesCS2B01G623900 chr2D 94.267 1064 50 3 1988 3044 638340598 638339539 0.000000e+00 1616.0
33 TraesCS2B01G623900 chr2D 88.612 1045 85 14 853 1878 190035651 190034622 0.000000e+00 1240.0
34 TraesCS2B01G623900 chr2D 85.860 1082 108 25 1977 3014 190034470 190033390 0.000000e+00 1109.0
35 TraesCS2B01G623900 chr2D 94.776 268 14 0 3048 3315 638339481 638339214 6.630000e-113 418.0
36 TraesCS2B01G623900 chr2D 89.241 316 28 3 390 700 638342360 638342046 1.450000e-104 390.0
37 TraesCS2B01G623900 chr2D 90.598 234 18 2 3085 3318 190033291 190033062 1.500000e-79 307.0
38 TraesCS2B01G623900 chr2D 79.861 288 56 1 472 759 639123614 639123899 4.340000e-50 209.0
39 TraesCS2B01G623900 chr2D 91.241 137 7 1 3489 3620 638338869 638338733 9.470000e-42 182.0
40 TraesCS2B01G623900 chr2D 88.889 126 11 1 3495 3620 190032709 190032587 7.420000e-33 152.0
41 TraesCS2B01G623900 chr2D 80.682 176 34 0 2791 2966 180993862 180994037 2.080000e-28 137.0
42 TraesCS2B01G623900 chr2D 79.592 147 26 4 2533 2677 180993610 180993754 7.580000e-18 102.0
43 TraesCS2B01G623900 chr2D 85.000 60 9 0 1616 1675 190116097 190116038 1.290000e-05 62.1
44 TraesCS2B01G623900 chr2D 94.872 39 2 0 1874 1912 638340916 638340878 1.290000e-05 62.1
45 TraesCS2B01G623900 chr4D 84.514 381 46 7 3 375 346204044 346203669 8.760000e-97 364.0
46 TraesCS2B01G623900 chr4D 89.542 153 16 0 3917 4069 386797550 386797702 1.220000e-45 195.0
47 TraesCS2B01G623900 chr4D 91.367 139 10 2 3931 4068 386796503 386796366 5.660000e-44 189.0
48 TraesCS2B01G623900 chr4D 91.367 139 9 3 3931 4068 440107366 440107502 2.030000e-43 187.0
49 TraesCS2B01G623900 chr7D 83.905 379 50 7 3 375 636717384 636717757 6.820000e-93 351.0
50 TraesCS2B01G623900 chr7D 97.368 38 1 0 3049 3086 94751527 94751564 9.950000e-07 65.8
51 TraesCS2B01G623900 chr6B 83.905 379 48 11 4 375 678533345 678532973 2.450000e-92 350.0
52 TraesCS2B01G623900 chr6B 83.945 218 31 2 4069 4282 451787 451570 5.620000e-49 206.0
53 TraesCS2B01G623900 chr6B 92.683 41 3 0 3423 3463 23879293 23879253 4.630000e-05 60.2
54 TraesCS2B01G623900 chr4A 83.727 381 49 7 3 375 590284966 590285341 8.820000e-92 348.0
55 TraesCS2B01G623900 chr4A 83.684 380 51 5 3 375 590429330 590428955 8.820000e-92 348.0
56 TraesCS2B01G623900 chr4A 82.869 251 42 1 469 718 589615917 589616167 1.550000e-54 224.0
57 TraesCS2B01G623900 chr1D 83.421 380 52 6 3 375 224573410 224573785 4.100000e-90 342.0
58 TraesCS2B01G623900 chr3B 80.583 309 56 3 468 774 191186546 191186852 7.170000e-58 235.0
59 TraesCS2B01G623900 chr3B 95.238 42 1 1 3045 3085 436224338 436224379 9.950000e-07 65.8
60 TraesCS2B01G623900 chr5A 83.399 253 41 1 470 721 580951042 580950790 2.580000e-57 233.0
61 TraesCS2B01G623900 chr5A 90.345 145 12 2 3931 4074 67014925 67014782 5.660000e-44 189.0
62 TraesCS2B01G623900 chr5A 90.345 145 12 2 3931 4074 67017442 67017299 5.660000e-44 189.0
63 TraesCS2B01G623900 chr5A 89.655 145 13 2 3931 4074 67009829 67009686 2.630000e-42 183.0
64 TraesCS2B01G623900 chr5A 87.586 145 16 2 3931 4074 67012468 67012325 2.650000e-37 167.0
65 TraesCS2B01G623900 chr5A 90.323 62 6 0 3423 3484 358614094 358614033 9.880000e-12 82.4
66 TraesCS2B01G623900 chr5A 100.000 28 0 0 3423 3450 135278139 135278112 8.000000e-03 52.8
67 TraesCS2B01G623900 chr6A 83.267 251 38 3 470 719 587855034 587855281 1.200000e-55 228.0
68 TraesCS2B01G623900 chr6A 100.000 39 0 0 3048 3086 419771632 419771594 5.940000e-09 73.1
69 TraesCS2B01G623900 chr7A 83.133 249 40 2 471 718 562321988 562322235 4.310000e-55 226.0
70 TraesCS2B01G623900 chr7A 83.784 222 32 2 4069 4286 586368288 586368509 1.560000e-49 207.0
71 TraesCS2B01G623900 chr7A 100.000 35 0 0 3048 3082 517520235 517520269 9.950000e-07 65.8
72 TraesCS2B01G623900 chr1B 82.432 222 34 3 4069 4286 651910424 651910644 5.660000e-44 189.0
73 TraesCS2B01G623900 chr6D 91.743 109 9 0 3960 4068 462705295 462705187 7.420000e-33 152.0
74 TraesCS2B01G623900 chr6D 89.286 56 6 0 3429 3484 454937634 454937689 2.140000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G623900 chr2B 797258975 797263260 4285 True 3865.500000 6685 100.000000 1 4286 2 chr2B.!!$R5 4285
1 TraesCS2B01G623900 chr2B 797231075 797235778 4703 True 1440.500000 3557 94.753000 1 3620 4 chr2B.!!$R4 3619
2 TraesCS2B01G623900 chr2B 246261503 246264345 2842 True 1347.500000 2536 86.321000 853 3620 2 chr2B.!!$R3 2767
3 TraesCS2B01G623900 chrUn 302673148 302675383 2235 False 1900.000000 2933 98.445000 1367 3620 2 chrUn.!!$F4 2253
4 TraesCS2B01G623900 chrUn 280178599 280179680 1081 False 514.000000 638 93.070000 145 1371 3 chrUn.!!$F3 1226
5 TraesCS2B01G623900 chr2A 763866838 763870698 3860 False 813.350000 1999 93.271333 4 3620 6 chr2A.!!$F1 3616
6 TraesCS2B01G623900 chr2A 203903430 203906249 2819 True 707.000000 1227 88.261750 861 3620 4 chr2A.!!$R3 2759
7 TraesCS2B01G623900 chr2D 638338733 638342360 3627 True 744.183333 1797 93.526000 390 3620 6 chr2D.!!$R3 3230
8 TraesCS2B01G623900 chr2D 190032587 190035651 3064 True 702.000000 1240 88.489750 853 3620 4 chr2D.!!$R2 2767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 44 0.893727 GGTGTTGCCCGGTCTGATTT 60.894 55.000 0.00 0.00 0.00 2.17 F
51 53 2.226437 CCCGGTCTGATTTGTTCAACAG 59.774 50.000 0.00 0.00 32.78 3.16 F
1321 2372 1.302752 AACGCATTCCAGCAGCTGA 60.303 52.632 24.90 4.95 32.44 4.26 F
2374 3765 3.591254 GACAAGGCGGCTTCGGTCT 62.591 63.158 25.64 4.08 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1182 2233 0.031616 AGAGGGATGGAGAGGTGGAC 60.032 60.0 0.00 0.0 0.00 4.02 R
1986 3359 0.647410 CTTGCTTCCTGCGTGATACG 59.353 55.0 0.00 0.0 46.63 3.06 R
2518 3957 0.823356 GAACTCAACAAGCCCCTGCA 60.823 55.0 0.00 0.0 41.13 4.41 R
3837 6243 0.041839 GATGCTTAATGGCGCACGAG 60.042 55.0 10.83 0.0 39.21 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 44 0.893727 GGTGTTGCCCGGTCTGATTT 60.894 55.000 0.00 0.00 0.00 2.17
51 53 2.226437 CCCGGTCTGATTTGTTCAACAG 59.774 50.000 0.00 0.00 32.78 3.16
143 145 3.574826 GAGCTCGGGTATAAAGGTGATCT 59.425 47.826 0.00 0.00 0.00 2.75
154 156 8.739972 GGTATAAAGGTGATCTGTCATTTGTTT 58.260 33.333 0.00 0.00 36.60 2.83
273 275 6.322712 TGGCTAGTGTTCCTTTGTGTAAAAAT 59.677 34.615 0.00 0.00 0.00 1.82
467 1480 4.040217 TGCAGGGTAAAATGAATGCTTGTT 59.960 37.500 0.00 0.00 34.80 2.83
469 1482 6.070881 TGCAGGGTAAAATGAATGCTTGTTAT 60.071 34.615 0.00 0.00 34.80 1.89
537 1552 4.142609 ACACTCATCCTTATGAACGCAT 57.857 40.909 0.00 0.00 41.57 4.73
576 1595 4.216472 CCTTAGGAGCAACTTCAAAAGACC 59.784 45.833 0.00 0.00 0.00 3.85
596 1615 5.124138 AGACCGAGCCGACATATTATCTTAG 59.876 44.000 0.00 0.00 0.00 2.18
655 1674 8.273557 CGACGAAAATATTACATCCCACTAAAG 58.726 37.037 0.00 0.00 0.00 1.85
658 1677 7.012894 CGAAAATATTACATCCCACTAAAGGCA 59.987 37.037 0.00 0.00 0.00 4.75
721 1740 4.786454 AGCACCAGGACTTAAACCCTAATA 59.214 41.667 0.00 0.00 0.00 0.98
725 1744 7.576287 GCACCAGGACTTAAACCCTAATAAAAC 60.576 40.741 0.00 0.00 0.00 2.43
800 1822 2.874086 CTCGCCAATTGTCATGCATCTA 59.126 45.455 4.43 0.00 0.00 1.98
1061 2103 2.856231 TCCTTCTCCTCTTCCTAGAGCT 59.144 50.000 0.00 0.00 45.48 4.09
1095 2146 3.076104 CGCCTACTCGGAGTACTCA 57.924 57.895 23.91 3.97 33.16 3.41
1182 2233 2.892425 GAGCTCCCCATCAACGCG 60.892 66.667 3.53 3.53 0.00 6.01
1233 2284 2.835431 ATCGGCACCTCCTCGGAG 60.835 66.667 5.97 5.97 41.63 4.63
1321 2372 1.302752 AACGCATTCCAGCAGCTGA 60.303 52.632 24.90 4.95 32.44 4.26
1938 3103 8.106247 TGTTGAATTATTTTGTGTACCTCCTC 57.894 34.615 0.00 0.00 0.00 3.71
2024 3397 4.333926 GCAAGCACAGAAAGACCCTAATAG 59.666 45.833 0.00 0.00 0.00 1.73
2035 3408 8.068733 AGAAAGACCCTAATAGTCCTTCTATGT 58.931 37.037 3.55 0.00 41.19 2.29
2106 3479 4.559862 TGAGAAGGCTAAGAAAAGGAGG 57.440 45.455 0.00 0.00 0.00 4.30
2374 3765 3.591254 GACAAGGCGGCTTCGGTCT 62.591 63.158 25.64 4.08 0.00 3.85
2423 3856 7.479980 CCGTTTACCATGTAATGTGATCAATT 58.520 34.615 0.00 2.82 44.81 2.32
3739 6145 4.074647 AAAAAGAGGAACCGCCCG 57.925 55.556 0.00 0.00 37.37 6.13
3740 6146 1.452801 AAAAAGAGGAACCGCCCGA 59.547 52.632 0.00 0.00 37.37 5.14
3741 6147 0.605589 AAAAAGAGGAACCGCCCGAG 60.606 55.000 0.00 0.00 37.37 4.63
3742 6148 2.465055 AAAAGAGGAACCGCCCGAGG 62.465 60.000 0.00 0.00 37.37 4.63
3794 6200 3.291611 GCAGGGTGCCAAATGAGG 58.708 61.111 0.00 0.00 37.42 3.86
3801 6207 3.446570 GCCAAATGAGGCGCTGCT 61.447 61.111 7.64 0.00 46.12 4.24
3802 6208 2.114670 GCCAAATGAGGCGCTGCTA 61.115 57.895 7.64 0.00 46.12 3.49
3803 6209 1.450531 GCCAAATGAGGCGCTGCTAT 61.451 55.000 7.64 0.00 46.12 2.97
3804 6210 0.590195 CCAAATGAGGCGCTGCTATC 59.410 55.000 7.64 0.00 0.00 2.08
3805 6211 0.234106 CAAATGAGGCGCTGCTATCG 59.766 55.000 7.64 0.00 0.00 2.92
3813 6219 3.333969 GCTGCTATCGCGAGGTGC 61.334 66.667 16.66 18.28 39.65 5.01
3814 6220 2.104928 CTGCTATCGCGAGGTGCA 59.895 61.111 24.49 24.49 46.97 4.57
3815 6221 1.300465 CTGCTATCGCGAGGTGCAT 60.300 57.895 25.64 8.20 46.97 3.96
3816 6222 1.554891 CTGCTATCGCGAGGTGCATG 61.555 60.000 25.64 18.14 46.97 4.06
3817 6223 1.300156 GCTATCGCGAGGTGCATGA 60.300 57.895 16.66 0.00 46.97 3.07
3818 6224 1.280886 GCTATCGCGAGGTGCATGAG 61.281 60.000 16.66 2.59 46.97 2.90
3819 6225 1.280886 CTATCGCGAGGTGCATGAGC 61.281 60.000 16.66 0.00 46.97 4.26
3820 6226 1.738346 TATCGCGAGGTGCATGAGCT 61.738 55.000 16.66 0.00 46.97 4.09
3821 6227 1.738346 ATCGCGAGGTGCATGAGCTA 61.738 55.000 16.66 0.00 46.97 3.32
3822 6228 2.233654 CGCGAGGTGCATGAGCTAC 61.234 63.158 0.00 0.00 46.97 3.58
3823 6229 1.142748 GCGAGGTGCATGAGCTACT 59.857 57.895 0.00 0.00 45.45 2.57
3824 6230 0.873743 GCGAGGTGCATGAGCTACTC 60.874 60.000 0.00 0.00 45.45 2.59
3825 6231 0.457443 CGAGGTGCATGAGCTACTCA 59.543 55.000 0.00 0.00 44.99 3.41
3826 6232 1.134995 CGAGGTGCATGAGCTACTCAA 60.135 52.381 0.00 0.00 44.04 3.02
3827 6233 2.275318 GAGGTGCATGAGCTACTCAAC 58.725 52.381 0.00 0.00 44.04 3.18
3828 6234 1.065854 AGGTGCATGAGCTACTCAACC 60.066 52.381 0.00 8.32 44.04 3.77
3829 6235 1.339055 GGTGCATGAGCTACTCAACCA 60.339 52.381 10.63 4.82 44.04 3.67
3830 6236 1.734465 GTGCATGAGCTACTCAACCAC 59.266 52.381 0.00 8.01 44.04 4.16
3831 6237 1.002366 GCATGAGCTACTCAACCACG 58.998 55.000 0.00 0.00 44.04 4.94
3832 6238 1.673033 GCATGAGCTACTCAACCACGT 60.673 52.381 0.00 0.00 44.04 4.49
3833 6239 2.263077 CATGAGCTACTCAACCACGTC 58.737 52.381 0.74 0.00 44.04 4.34
3834 6240 1.324383 TGAGCTACTCAACCACGTCA 58.676 50.000 0.00 0.00 37.57 4.35
3835 6241 1.269723 TGAGCTACTCAACCACGTCAG 59.730 52.381 0.00 0.00 37.57 3.51
3836 6242 0.603569 AGCTACTCAACCACGTCAGG 59.396 55.000 0.00 0.00 0.00 3.86
3837 6243 1.014564 GCTACTCAACCACGTCAGGC 61.015 60.000 0.00 0.00 0.00 4.85
3838 6244 0.603569 CTACTCAACCACGTCAGGCT 59.396 55.000 0.00 0.00 0.00 4.58
3839 6245 0.601558 TACTCAACCACGTCAGGCTC 59.398 55.000 0.00 0.00 0.00 4.70
3840 6246 1.734477 CTCAACCACGTCAGGCTCG 60.734 63.158 0.00 0.00 0.00 5.03
3841 6247 2.029073 CAACCACGTCAGGCTCGT 59.971 61.111 0.00 0.00 42.33 4.18
3853 6259 2.023320 GCTCGTGCGCCATTAAGC 59.977 61.111 4.18 3.04 0.00 3.09
3854 6260 2.749865 GCTCGTGCGCCATTAAGCA 61.750 57.895 4.18 0.00 41.55 3.91
3855 6261 2.016961 CTCGTGCGCCATTAAGCAT 58.983 52.632 4.18 0.00 45.69 3.79
3856 6262 0.041839 CTCGTGCGCCATTAAGCATC 60.042 55.000 4.18 0.00 45.69 3.91
3857 6263 1.009675 CGTGCGCCATTAAGCATCC 60.010 57.895 4.18 0.00 45.69 3.51
3858 6264 1.713937 CGTGCGCCATTAAGCATCCA 61.714 55.000 4.18 0.00 45.69 3.41
3859 6265 0.248621 GTGCGCCATTAAGCATCCAC 60.249 55.000 4.18 0.00 45.69 4.02
3860 6266 1.360192 GCGCCATTAAGCATCCACC 59.640 57.895 0.00 0.00 0.00 4.61
3861 6267 1.383456 GCGCCATTAAGCATCCACCA 61.383 55.000 0.00 0.00 0.00 4.17
3862 6268 1.321474 CGCCATTAAGCATCCACCAT 58.679 50.000 0.00 0.00 0.00 3.55
3863 6269 1.267806 CGCCATTAAGCATCCACCATC 59.732 52.381 0.00 0.00 0.00 3.51
3864 6270 2.309613 GCCATTAAGCATCCACCATCA 58.690 47.619 0.00 0.00 0.00 3.07
3865 6271 2.035066 GCCATTAAGCATCCACCATCAC 59.965 50.000 0.00 0.00 0.00 3.06
3866 6272 2.624838 CCATTAAGCATCCACCATCACC 59.375 50.000 0.00 0.00 0.00 4.02
3867 6273 2.036958 TTAAGCATCCACCATCACCG 57.963 50.000 0.00 0.00 0.00 4.94
3868 6274 0.463654 TAAGCATCCACCATCACCGC 60.464 55.000 0.00 0.00 0.00 5.68
3869 6275 3.211963 GCATCCACCATCACCGCC 61.212 66.667 0.00 0.00 0.00 6.13
3870 6276 2.896854 CATCCACCATCACCGCCG 60.897 66.667 0.00 0.00 0.00 6.46
3871 6277 4.856801 ATCCACCATCACCGCCGC 62.857 66.667 0.00 0.00 0.00 6.53
3893 6299 4.179579 GCCGCTCCGCCATTTGTC 62.180 66.667 0.00 0.00 0.00 3.18
3894 6300 3.864686 CCGCTCCGCCATTTGTCG 61.865 66.667 0.00 0.00 0.00 4.35
3895 6301 3.118454 CGCTCCGCCATTTGTCGT 61.118 61.111 0.00 0.00 0.00 4.34
3896 6302 2.480555 GCTCCGCCATTTGTCGTG 59.519 61.111 0.00 0.00 0.00 4.35
3897 6303 3.039202 GCTCCGCCATTTGTCGTGG 62.039 63.158 0.00 0.00 39.80 4.94
3898 6304 1.671054 CTCCGCCATTTGTCGTGGT 60.671 57.895 0.00 0.00 39.01 4.16
3899 6305 1.635663 CTCCGCCATTTGTCGTGGTC 61.636 60.000 0.00 0.00 39.01 4.02
3900 6306 1.671054 CCGCCATTTGTCGTGGTCT 60.671 57.895 0.00 0.00 39.01 3.85
3901 6307 1.234615 CCGCCATTTGTCGTGGTCTT 61.235 55.000 0.00 0.00 39.01 3.01
3902 6308 0.165944 CGCCATTTGTCGTGGTCTTC 59.834 55.000 0.00 0.00 39.01 2.87
3903 6309 0.165944 GCCATTTGTCGTGGTCTTCG 59.834 55.000 0.00 0.00 39.01 3.79
3904 6310 0.165944 CCATTTGTCGTGGTCTTCGC 59.834 55.000 0.00 0.00 31.96 4.70
3905 6311 0.165944 CATTTGTCGTGGTCTTCGCC 59.834 55.000 0.00 0.00 0.00 5.54
3906 6312 1.289109 ATTTGTCGTGGTCTTCGCCG 61.289 55.000 0.00 0.00 0.00 6.46
3907 6313 3.851845 TTGTCGTGGTCTTCGCCGG 62.852 63.158 0.00 0.00 0.00 6.13
3908 6314 4.047059 GTCGTGGTCTTCGCCGGA 62.047 66.667 5.05 0.00 0.00 5.14
3909 6315 3.066190 TCGTGGTCTTCGCCGGAT 61.066 61.111 5.05 0.00 0.00 4.18
3910 6316 2.125673 CGTGGTCTTCGCCGGATT 60.126 61.111 5.05 0.00 0.00 3.01
3911 6317 1.740296 CGTGGTCTTCGCCGGATTT 60.740 57.895 5.05 0.00 0.00 2.17
3912 6318 0.458889 CGTGGTCTTCGCCGGATTTA 60.459 55.000 5.05 0.00 0.00 1.40
3913 6319 1.287425 GTGGTCTTCGCCGGATTTAG 58.713 55.000 5.05 0.00 0.00 1.85
3914 6320 1.134907 GTGGTCTTCGCCGGATTTAGA 60.135 52.381 5.05 0.00 0.00 2.10
3915 6321 1.136305 TGGTCTTCGCCGGATTTAGAG 59.864 52.381 5.05 0.00 0.00 2.43
3916 6322 1.209998 GTCTTCGCCGGATTTAGAGC 58.790 55.000 5.05 0.00 0.00 4.09
3917 6323 1.112113 TCTTCGCCGGATTTAGAGCT 58.888 50.000 5.05 0.00 0.00 4.09
3918 6324 1.202417 TCTTCGCCGGATTTAGAGCTG 60.202 52.381 5.05 0.00 0.00 4.24
3919 6325 0.535335 TTCGCCGGATTTAGAGCTGT 59.465 50.000 5.05 0.00 0.00 4.40
3920 6326 0.102481 TCGCCGGATTTAGAGCTGTC 59.898 55.000 5.05 0.00 0.00 3.51
3921 6327 1.209275 CGCCGGATTTAGAGCTGTCG 61.209 60.000 5.05 0.00 0.00 4.35
3922 6328 0.179108 GCCGGATTTAGAGCTGTCGT 60.179 55.000 5.05 0.00 0.00 4.34
3923 6329 1.560923 CCGGATTTAGAGCTGTCGTG 58.439 55.000 0.00 0.00 0.00 4.35
3924 6330 1.135083 CCGGATTTAGAGCTGTCGTGT 60.135 52.381 0.00 0.00 0.00 4.49
3925 6331 1.920574 CGGATTTAGAGCTGTCGTGTG 59.079 52.381 0.00 0.00 0.00 3.82
3926 6332 2.671351 CGGATTTAGAGCTGTCGTGTGT 60.671 50.000 0.00 0.00 0.00 3.72
3927 6333 3.427098 CGGATTTAGAGCTGTCGTGTGTA 60.427 47.826 0.00 0.00 0.00 2.90
3928 6334 4.106197 GGATTTAGAGCTGTCGTGTGTAG 58.894 47.826 0.00 0.00 0.00 2.74
3929 6335 2.631418 TTAGAGCTGTCGTGTGTAGC 57.369 50.000 0.00 0.00 37.71 3.58
3930 6336 1.530323 TAGAGCTGTCGTGTGTAGCA 58.470 50.000 0.00 0.00 39.84 3.49
3931 6337 0.673985 AGAGCTGTCGTGTGTAGCAA 59.326 50.000 0.00 0.00 39.84 3.91
3932 6338 1.063806 GAGCTGTCGTGTGTAGCAAG 58.936 55.000 0.00 0.00 39.84 4.01
3933 6339 0.319900 AGCTGTCGTGTGTAGCAAGG 60.320 55.000 0.00 0.00 39.84 3.61
3934 6340 1.291877 GCTGTCGTGTGTAGCAAGGG 61.292 60.000 0.00 0.00 37.40 3.95
3935 6341 0.670546 CTGTCGTGTGTAGCAAGGGG 60.671 60.000 0.00 0.00 0.00 4.79
3936 6342 1.116536 TGTCGTGTGTAGCAAGGGGA 61.117 55.000 0.00 0.00 0.00 4.81
3937 6343 0.249398 GTCGTGTGTAGCAAGGGGAT 59.751 55.000 0.00 0.00 0.00 3.85
3938 6344 0.981183 TCGTGTGTAGCAAGGGGATT 59.019 50.000 0.00 0.00 0.00 3.01
3939 6345 1.349688 TCGTGTGTAGCAAGGGGATTT 59.650 47.619 0.00 0.00 0.00 2.17
3940 6346 1.737793 CGTGTGTAGCAAGGGGATTTC 59.262 52.381 0.00 0.00 0.00 2.17
3941 6347 2.615493 CGTGTGTAGCAAGGGGATTTCT 60.615 50.000 0.00 0.00 0.00 2.52
3942 6348 2.749621 GTGTGTAGCAAGGGGATTTCTG 59.250 50.000 0.00 0.00 0.00 3.02
3943 6349 2.375174 TGTGTAGCAAGGGGATTTCTGT 59.625 45.455 0.00 0.00 0.00 3.41
3944 6350 3.585289 TGTGTAGCAAGGGGATTTCTGTA 59.415 43.478 0.00 0.00 0.00 2.74
3945 6351 4.042311 TGTGTAGCAAGGGGATTTCTGTAA 59.958 41.667 0.00 0.00 0.00 2.41
3946 6352 5.007682 GTGTAGCAAGGGGATTTCTGTAAA 58.992 41.667 0.00 0.00 0.00 2.01
3947 6353 5.652452 GTGTAGCAAGGGGATTTCTGTAAAT 59.348 40.000 0.00 0.00 38.03 1.40
3948 6354 6.826741 GTGTAGCAAGGGGATTTCTGTAAATA 59.173 38.462 0.00 0.00 35.41 1.40
3949 6355 7.502561 GTGTAGCAAGGGGATTTCTGTAAATAT 59.497 37.037 0.00 0.00 35.41 1.28
3950 6356 6.966534 AGCAAGGGGATTTCTGTAAATATG 57.033 37.500 0.00 0.00 35.41 1.78
3951 6357 6.435164 AGCAAGGGGATTTCTGTAAATATGT 58.565 36.000 0.00 0.00 35.41 2.29
3952 6358 6.897413 AGCAAGGGGATTTCTGTAAATATGTT 59.103 34.615 0.00 0.00 35.41 2.71
3953 6359 7.400052 AGCAAGGGGATTTCTGTAAATATGTTT 59.600 33.333 0.00 0.00 35.41 2.83
3954 6360 8.691797 GCAAGGGGATTTCTGTAAATATGTTTA 58.308 33.333 0.00 0.00 35.41 2.01
3957 6363 9.990868 AGGGGATTTCTGTAAATATGTTTAAGT 57.009 29.630 0.00 0.00 35.41 2.24
3960 6366 9.516314 GGATTTCTGTAAATATGTTTAAGTGGC 57.484 33.333 0.00 0.00 35.41 5.01
3965 6371 9.337396 TCTGTAAATATGTTTAAGTGGCTATGG 57.663 33.333 0.00 0.00 31.94 2.74
3966 6372 8.458573 TGTAAATATGTTTAAGTGGCTATGGG 57.541 34.615 0.00 0.00 31.94 4.00
3967 6373 6.976934 AAATATGTTTAAGTGGCTATGGGG 57.023 37.500 0.00 0.00 0.00 4.96
3968 6374 2.137810 TGTTTAAGTGGCTATGGGGC 57.862 50.000 0.00 0.00 41.27 5.80
3976 6382 1.819753 TGGCTATGGGGCATCTAACT 58.180 50.000 0.00 0.00 45.79 2.24
3977 6383 2.135189 TGGCTATGGGGCATCTAACTT 58.865 47.619 0.00 0.00 45.79 2.66
3978 6384 2.106511 TGGCTATGGGGCATCTAACTTC 59.893 50.000 0.00 0.00 45.79 3.01
3979 6385 2.373502 GGCTATGGGGCATCTAACTTCT 59.626 50.000 0.00 0.00 40.53 2.85
3980 6386 3.181439 GGCTATGGGGCATCTAACTTCTT 60.181 47.826 0.00 0.00 40.53 2.52
3981 6387 4.041691 GGCTATGGGGCATCTAACTTCTTA 59.958 45.833 0.00 0.00 40.53 2.10
3982 6388 5.280727 GGCTATGGGGCATCTAACTTCTTAT 60.281 44.000 0.00 0.00 40.53 1.73
3983 6389 5.877564 GCTATGGGGCATCTAACTTCTTATC 59.122 44.000 0.00 0.00 0.00 1.75
3984 6390 6.296145 GCTATGGGGCATCTAACTTCTTATCT 60.296 42.308 0.00 0.00 0.00 1.98
3985 6391 7.093289 GCTATGGGGCATCTAACTTCTTATCTA 60.093 40.741 0.00 0.00 0.00 1.98
3986 6392 7.633018 ATGGGGCATCTAACTTCTTATCTAA 57.367 36.000 0.00 0.00 0.00 2.10
3987 6393 7.633018 TGGGGCATCTAACTTCTTATCTAAT 57.367 36.000 0.00 0.00 0.00 1.73
3988 6394 7.680730 TGGGGCATCTAACTTCTTATCTAATC 58.319 38.462 0.00 0.00 0.00 1.75
3989 6395 7.106890 GGGGCATCTAACTTCTTATCTAATCC 58.893 42.308 0.00 0.00 0.00 3.01
3990 6396 6.814146 GGGCATCTAACTTCTTATCTAATCCG 59.186 42.308 0.00 0.00 0.00 4.18
3991 6397 7.379750 GGCATCTAACTTCTTATCTAATCCGT 58.620 38.462 0.00 0.00 0.00 4.69
3992 6398 7.542824 GGCATCTAACTTCTTATCTAATCCGTC 59.457 40.741 0.00 0.00 0.00 4.79
3993 6399 7.542824 GCATCTAACTTCTTATCTAATCCGTCC 59.457 40.741 0.00 0.00 0.00 4.79
3994 6400 8.577296 CATCTAACTTCTTATCTAATCCGTCCA 58.423 37.037 0.00 0.00 0.00 4.02
3995 6401 8.707796 TCTAACTTCTTATCTAATCCGTCCAT 57.292 34.615 0.00 0.00 0.00 3.41
3996 6402 8.794553 TCTAACTTCTTATCTAATCCGTCCATC 58.205 37.037 0.00 0.00 0.00 3.51
3997 6403 7.604657 AACTTCTTATCTAATCCGTCCATCT 57.395 36.000 0.00 0.00 0.00 2.90
3998 6404 8.707796 AACTTCTTATCTAATCCGTCCATCTA 57.292 34.615 0.00 0.00 0.00 1.98
3999 6405 8.113173 ACTTCTTATCTAATCCGTCCATCTAC 57.887 38.462 0.00 0.00 0.00 2.59
4000 6406 7.177041 ACTTCTTATCTAATCCGTCCATCTACC 59.823 40.741 0.00 0.00 0.00 3.18
4001 6407 6.549242 TCTTATCTAATCCGTCCATCTACCA 58.451 40.000 0.00 0.00 0.00 3.25
4002 6408 7.182760 TCTTATCTAATCCGTCCATCTACCAT 58.817 38.462 0.00 0.00 0.00 3.55
4003 6409 5.923733 ATCTAATCCGTCCATCTACCATC 57.076 43.478 0.00 0.00 0.00 3.51
4004 6410 4.087182 TCTAATCCGTCCATCTACCATCC 58.913 47.826 0.00 0.00 0.00 3.51
4005 6411 1.257743 ATCCGTCCATCTACCATCCG 58.742 55.000 0.00 0.00 0.00 4.18
4006 6412 0.826256 TCCGTCCATCTACCATCCGG 60.826 60.000 0.00 0.00 38.77 5.14
4016 6422 3.402681 CCATCCGGTGGCTCTGGT 61.403 66.667 13.78 0.00 42.12 4.00
4017 6423 2.124983 CATCCGGTGGCTCTGGTG 60.125 66.667 13.78 8.12 42.90 4.17
4018 6424 3.402681 ATCCGGTGGCTCTGGTGG 61.403 66.667 13.78 0.00 42.90 4.61
4019 6425 4.954118 TCCGGTGGCTCTGGTGGT 62.954 66.667 13.78 0.00 42.90 4.16
4020 6426 2.815684 ATCCGGTGGCTCTGGTGGTA 62.816 60.000 13.78 0.00 42.90 3.25
4021 6427 2.589157 CCGGTGGCTCTGGTGGTAA 61.589 63.158 6.25 0.00 37.78 2.85
4022 6428 1.079127 CGGTGGCTCTGGTGGTAAG 60.079 63.158 0.00 0.00 0.00 2.34
4023 6429 1.827399 CGGTGGCTCTGGTGGTAAGT 61.827 60.000 0.00 0.00 0.00 2.24
4024 6430 0.400594 GGTGGCTCTGGTGGTAAGTT 59.599 55.000 0.00 0.00 0.00 2.66
4025 6431 1.202891 GGTGGCTCTGGTGGTAAGTTT 60.203 52.381 0.00 0.00 0.00 2.66
4026 6432 2.152016 GTGGCTCTGGTGGTAAGTTTC 58.848 52.381 0.00 0.00 0.00 2.78
4027 6433 1.073284 TGGCTCTGGTGGTAAGTTTCC 59.927 52.381 0.00 0.00 0.00 3.13
4028 6434 1.073284 GGCTCTGGTGGTAAGTTTCCA 59.927 52.381 0.00 0.00 0.00 3.53
4029 6435 2.427506 GCTCTGGTGGTAAGTTTCCAG 58.572 52.381 0.74 5.77 46.00 3.86
4036 6442 5.450453 TGGTGGTAAGTTTCCAGATTTTCA 58.550 37.500 0.74 0.00 35.49 2.69
4037 6443 5.300792 TGGTGGTAAGTTTCCAGATTTTCAC 59.699 40.000 0.74 0.00 35.49 3.18
4038 6444 5.535030 GGTGGTAAGTTTCCAGATTTTCACT 59.465 40.000 0.74 0.00 35.49 3.41
4039 6445 6.438763 GTGGTAAGTTTCCAGATTTTCACTG 58.561 40.000 0.74 0.00 35.49 3.66
4040 6446 6.262273 GTGGTAAGTTTCCAGATTTTCACTGA 59.738 38.462 0.74 0.00 37.54 3.41
4041 6447 6.831353 TGGTAAGTTTCCAGATTTTCACTGAA 59.169 34.615 0.00 0.00 37.54 3.02
4042 6448 7.505585 TGGTAAGTTTCCAGATTTTCACTGAAT 59.494 33.333 0.00 0.00 37.54 2.57
4043 6449 8.360390 GGTAAGTTTCCAGATTTTCACTGAATT 58.640 33.333 0.00 0.00 37.54 2.17
4046 6452 9.750125 AAGTTTCCAGATTTTCACTGAATTAAC 57.250 29.630 0.00 0.00 37.54 2.01
4047 6453 8.076178 AGTTTCCAGATTTTCACTGAATTAACG 58.924 33.333 0.00 0.00 37.54 3.18
4048 6454 7.504924 TTCCAGATTTTCACTGAATTAACGT 57.495 32.000 0.00 0.00 37.54 3.99
4049 6455 7.504924 TCCAGATTTTCACTGAATTAACGTT 57.495 32.000 5.88 5.88 37.54 3.99
4050 6456 7.936584 TCCAGATTTTCACTGAATTAACGTTT 58.063 30.769 5.91 0.00 37.54 3.60
4051 6457 8.410141 TCCAGATTTTCACTGAATTAACGTTTT 58.590 29.630 5.91 0.00 37.54 2.43
4052 6458 8.690840 CCAGATTTTCACTGAATTAACGTTTTC 58.309 33.333 5.91 5.89 37.54 2.29
4053 6459 9.232082 CAGATTTTCACTGAATTAACGTTTTCA 57.768 29.630 5.91 10.68 37.54 2.69
4054 6460 9.233232 AGATTTTCACTGAATTAACGTTTTCAC 57.767 29.630 5.91 0.00 0.00 3.18
4055 6461 7.743520 TTTTCACTGAATTAACGTTTTCACC 57.256 32.000 5.91 0.00 0.00 4.02
4056 6462 6.687081 TTCACTGAATTAACGTTTTCACCT 57.313 33.333 5.91 0.00 0.00 4.00
4057 6463 6.055231 TCACTGAATTAACGTTTTCACCTG 57.945 37.500 5.91 7.55 0.00 4.00
4058 6464 5.818336 TCACTGAATTAACGTTTTCACCTGA 59.182 36.000 5.91 9.60 0.00 3.86
4059 6465 6.485313 TCACTGAATTAACGTTTTCACCTGAT 59.515 34.615 5.91 0.00 0.00 2.90
4060 6466 7.658167 TCACTGAATTAACGTTTTCACCTGATA 59.342 33.333 5.91 0.00 0.00 2.15
4061 6467 7.744715 CACTGAATTAACGTTTTCACCTGATAC 59.255 37.037 5.91 0.00 0.00 2.24
4062 6468 7.660208 ACTGAATTAACGTTTTCACCTGATACT 59.340 33.333 5.91 0.00 0.00 2.12
4063 6469 8.385898 TGAATTAACGTTTTCACCTGATACTT 57.614 30.769 5.91 0.00 0.00 2.24
4064 6470 8.500773 TGAATTAACGTTTTCACCTGATACTTC 58.499 33.333 5.91 0.00 0.00 3.01
4065 6471 4.985044 AACGTTTTCACCTGATACTTCG 57.015 40.909 0.00 0.00 0.00 3.79
4066 6472 2.735134 ACGTTTTCACCTGATACTTCGC 59.265 45.455 0.00 0.00 0.00 4.70
4067 6473 2.093783 CGTTTTCACCTGATACTTCGCC 59.906 50.000 0.00 0.00 0.00 5.54
4068 6474 2.396590 TTTCACCTGATACTTCGCCC 57.603 50.000 0.00 0.00 0.00 6.13
4069 6475 1.271856 TTCACCTGATACTTCGCCCA 58.728 50.000 0.00 0.00 0.00 5.36
4070 6476 1.496060 TCACCTGATACTTCGCCCAT 58.504 50.000 0.00 0.00 0.00 4.00
4071 6477 1.138859 TCACCTGATACTTCGCCCATG 59.861 52.381 0.00 0.00 0.00 3.66
4072 6478 1.134401 CACCTGATACTTCGCCCATGT 60.134 52.381 0.00 0.00 0.00 3.21
4073 6479 2.102420 CACCTGATACTTCGCCCATGTA 59.898 50.000 0.00 0.00 0.00 2.29
4074 6480 2.365617 ACCTGATACTTCGCCCATGTAG 59.634 50.000 0.00 0.00 0.00 2.74
4075 6481 2.365617 CCTGATACTTCGCCCATGTAGT 59.634 50.000 0.00 0.00 0.00 2.73
4076 6482 3.572682 CCTGATACTTCGCCCATGTAGTA 59.427 47.826 0.00 0.00 0.00 1.82
4077 6483 4.038763 CCTGATACTTCGCCCATGTAGTAA 59.961 45.833 0.00 0.00 0.00 2.24
4078 6484 5.279506 CCTGATACTTCGCCCATGTAGTAAT 60.280 44.000 0.00 0.00 0.00 1.89
4079 6485 5.538118 TGATACTTCGCCCATGTAGTAATG 58.462 41.667 0.00 0.00 0.00 1.90
4080 6486 2.561569 ACTTCGCCCATGTAGTAATGC 58.438 47.619 0.00 0.00 0.00 3.56
4081 6487 2.093181 ACTTCGCCCATGTAGTAATGCA 60.093 45.455 0.00 0.00 0.00 3.96
4082 6488 2.928801 TCGCCCATGTAGTAATGCAT 57.071 45.000 0.00 0.00 0.00 3.96
4083 6489 3.207265 TCGCCCATGTAGTAATGCATT 57.793 42.857 17.56 17.56 0.00 3.56
4084 6490 4.344359 TCGCCCATGTAGTAATGCATTA 57.656 40.909 15.21 15.21 0.00 1.90
4085 6491 4.062293 TCGCCCATGTAGTAATGCATTAC 58.938 43.478 33.03 33.03 42.19 1.89
4102 6508 9.784531 AATGCATTACTACTGCTTGATAATAGT 57.215 29.630 11.02 0.00 40.34 2.12
4103 6509 8.593492 TGCATTACTACTGCTTGATAATAGTG 57.407 34.615 0.64 0.00 40.34 2.74
4104 6510 8.421002 TGCATTACTACTGCTTGATAATAGTGA 58.579 33.333 0.64 0.00 40.34 3.41
4105 6511 8.704234 GCATTACTACTGCTTGATAATAGTGAC 58.296 37.037 0.00 0.00 36.68 3.67
4106 6512 9.197694 CATTACTACTGCTTGATAATAGTGACC 57.802 37.037 0.00 0.00 0.00 4.02
4107 6513 8.534954 TTACTACTGCTTGATAATAGTGACCT 57.465 34.615 0.00 0.00 0.00 3.85
4108 6514 9.636789 TTACTACTGCTTGATAATAGTGACCTA 57.363 33.333 0.00 0.00 0.00 3.08
4109 6515 8.172352 ACTACTGCTTGATAATAGTGACCTAG 57.828 38.462 0.00 0.00 0.00 3.02
4110 6516 7.780745 ACTACTGCTTGATAATAGTGACCTAGT 59.219 37.037 0.00 0.00 0.00 2.57
4111 6517 9.286170 CTACTGCTTGATAATAGTGACCTAGTA 57.714 37.037 0.00 0.00 0.00 1.82
4112 6518 8.534954 ACTGCTTGATAATAGTGACCTAGTAA 57.465 34.615 0.00 0.00 28.47 2.24
4113 6519 8.978472 ACTGCTTGATAATAGTGACCTAGTAAA 58.022 33.333 0.00 0.00 28.47 2.01
4114 6520 9.988815 CTGCTTGATAATAGTGACCTAGTAAAT 57.011 33.333 0.00 0.00 28.47 1.40
4115 6521 9.982651 TGCTTGATAATAGTGACCTAGTAAATC 57.017 33.333 0.00 0.00 28.47 2.17
4124 6530 9.787435 ATAGTGACCTAGTAAATCTAGACTCAG 57.213 37.037 0.00 0.00 46.53 3.35
4125 6531 7.863722 AGTGACCTAGTAAATCTAGACTCAGA 58.136 38.462 0.00 0.00 46.53 3.27
4126 6532 8.499406 AGTGACCTAGTAAATCTAGACTCAGAT 58.501 37.037 0.00 0.00 46.53 2.90
4127 6533 8.564574 GTGACCTAGTAAATCTAGACTCAGATG 58.435 40.741 0.00 0.00 46.53 2.90
4128 6534 8.275758 TGACCTAGTAAATCTAGACTCAGATGT 58.724 37.037 0.00 0.00 46.53 3.06
4129 6535 8.458573 ACCTAGTAAATCTAGACTCAGATGTG 57.541 38.462 0.00 0.00 46.53 3.21
4130 6536 7.504238 ACCTAGTAAATCTAGACTCAGATGTGG 59.496 40.741 0.00 0.00 46.53 4.17
4131 6537 7.504238 CCTAGTAAATCTAGACTCAGATGTGGT 59.496 40.741 0.00 0.00 46.53 4.16
4132 6538 9.562408 CTAGTAAATCTAGACTCAGATGTGGTA 57.438 37.037 0.00 0.00 46.53 3.25
4133 6539 8.824756 AGTAAATCTAGACTCAGATGTGGTAA 57.175 34.615 0.00 0.00 35.42 2.85
4134 6540 9.427821 AGTAAATCTAGACTCAGATGTGGTAAT 57.572 33.333 0.00 0.00 35.42 1.89
4135 6541 9.469807 GTAAATCTAGACTCAGATGTGGTAATG 57.530 37.037 0.00 0.00 35.42 1.90
4136 6542 5.521906 TCTAGACTCAGATGTGGTAATGC 57.478 43.478 0.00 0.00 0.00 3.56
4137 6543 4.956075 TCTAGACTCAGATGTGGTAATGCA 59.044 41.667 0.00 0.00 0.00 3.96
4138 6544 4.767578 AGACTCAGATGTGGTAATGCAT 57.232 40.909 0.00 0.00 0.00 3.96
4139 6545 5.108187 AGACTCAGATGTGGTAATGCATT 57.892 39.130 17.56 17.56 0.00 3.56
4140 6546 5.121811 AGACTCAGATGTGGTAATGCATTC 58.878 41.667 16.86 7.72 0.00 2.67
4141 6547 4.202441 ACTCAGATGTGGTAATGCATTCC 58.798 43.478 16.86 16.65 0.00 3.01
4142 6548 4.080129 ACTCAGATGTGGTAATGCATTCCT 60.080 41.667 16.86 1.90 0.00 3.36
4143 6549 5.130975 ACTCAGATGTGGTAATGCATTCCTA 59.869 40.000 16.86 0.00 0.00 2.94
4144 6550 5.368145 TCAGATGTGGTAATGCATTCCTAC 58.632 41.667 16.86 13.46 0.00 3.18
4145 6551 5.130975 TCAGATGTGGTAATGCATTCCTACT 59.869 40.000 16.86 11.26 0.00 2.57
4146 6552 5.237996 CAGATGTGGTAATGCATTCCTACTG 59.762 44.000 16.86 17.12 0.00 2.74
4147 6553 4.568072 TGTGGTAATGCATTCCTACTGT 57.432 40.909 16.86 0.00 0.00 3.55
4148 6554 4.917385 TGTGGTAATGCATTCCTACTGTT 58.083 39.130 16.86 0.00 0.00 3.16
4149 6555 6.056090 TGTGGTAATGCATTCCTACTGTTA 57.944 37.500 16.86 0.00 0.00 2.41
4150 6556 6.658849 TGTGGTAATGCATTCCTACTGTTAT 58.341 36.000 16.86 0.00 0.00 1.89
4151 6557 7.797062 TGTGGTAATGCATTCCTACTGTTATA 58.203 34.615 16.86 0.00 0.00 0.98
4152 6558 8.436778 TGTGGTAATGCATTCCTACTGTTATAT 58.563 33.333 16.86 0.00 0.00 0.86
4153 6559 9.938280 GTGGTAATGCATTCCTACTGTTATATA 57.062 33.333 16.86 0.00 0.00 0.86
4168 6574 5.956642 TGTTATATAACAGCGACAGTGACA 58.043 37.500 21.73 0.00 40.93 3.58
4169 6575 6.569780 TGTTATATAACAGCGACAGTGACAT 58.430 36.000 21.73 0.00 40.93 3.06
4170 6576 7.039270 TGTTATATAACAGCGACAGTGACATT 58.961 34.615 21.73 0.00 40.93 2.71
4171 6577 8.192110 TGTTATATAACAGCGACAGTGACATTA 58.808 33.333 21.73 0.00 40.93 1.90
4172 6578 8.477709 GTTATATAACAGCGACAGTGACATTAC 58.522 37.037 18.75 0.00 36.25 1.89
4173 6579 3.386768 AACAGCGACAGTGACATTACT 57.613 42.857 0.00 0.00 0.00 2.24
4174 6580 4.514781 AACAGCGACAGTGACATTACTA 57.485 40.909 0.00 0.00 0.00 1.82
4175 6581 4.720649 ACAGCGACAGTGACATTACTAT 57.279 40.909 0.00 0.00 0.00 2.12
4176 6582 5.073311 ACAGCGACAGTGACATTACTATT 57.927 39.130 0.00 0.00 0.00 1.73
4177 6583 5.479306 ACAGCGACAGTGACATTACTATTT 58.521 37.500 0.00 0.00 0.00 1.40
4178 6584 5.577164 ACAGCGACAGTGACATTACTATTTC 59.423 40.000 0.00 0.00 0.00 2.17
4179 6585 5.576774 CAGCGACAGTGACATTACTATTTCA 59.423 40.000 0.00 0.00 0.00 2.69
4180 6586 6.256539 CAGCGACAGTGACATTACTATTTCAT 59.743 38.462 0.00 0.00 0.00 2.57
4181 6587 6.256539 AGCGACAGTGACATTACTATTTCATG 59.743 38.462 0.00 0.00 0.00 3.07
4182 6588 6.036083 GCGACAGTGACATTACTATTTCATGT 59.964 38.462 0.00 0.00 33.72 3.21
4183 6589 7.222031 GCGACAGTGACATTACTATTTCATGTA 59.778 37.037 0.00 0.00 31.10 2.29
4184 6590 8.746751 CGACAGTGACATTACTATTTCATGTAG 58.253 37.037 0.00 0.00 31.10 2.74
4185 6591 9.803315 GACAGTGACATTACTATTTCATGTAGA 57.197 33.333 0.00 0.00 31.10 2.59
4188 6594 9.601217 AGTGACATTACTATTTCATGTAGAACC 57.399 33.333 0.00 0.00 35.56 3.62
4189 6595 9.378551 GTGACATTACTATTTCATGTAGAACCA 57.621 33.333 0.00 0.00 35.56 3.67
4190 6596 9.599866 TGACATTACTATTTCATGTAGAACCAG 57.400 33.333 0.00 0.00 35.56 4.00
4191 6597 9.601217 GACATTACTATTTCATGTAGAACCAGT 57.399 33.333 0.00 0.00 35.56 4.00
4192 6598 9.959721 ACATTACTATTTCATGTAGAACCAGTT 57.040 29.630 0.00 0.00 35.56 3.16
4200 6606 7.900782 TTCATGTAGAACCAGTTTAGTTAGC 57.099 36.000 0.00 0.00 0.00 3.09
4201 6607 6.097356 TCATGTAGAACCAGTTTAGTTAGCG 58.903 40.000 0.00 0.00 0.00 4.26
4202 6608 5.458041 TGTAGAACCAGTTTAGTTAGCGT 57.542 39.130 0.00 0.00 0.00 5.07
4203 6609 5.846203 TGTAGAACCAGTTTAGTTAGCGTT 58.154 37.500 0.00 0.00 0.00 4.84
4204 6610 5.693104 TGTAGAACCAGTTTAGTTAGCGTTG 59.307 40.000 0.00 0.00 0.00 4.10
4205 6611 4.062991 AGAACCAGTTTAGTTAGCGTTGG 58.937 43.478 0.00 0.00 0.00 3.77
4206 6612 3.480505 ACCAGTTTAGTTAGCGTTGGT 57.519 42.857 0.00 0.00 32.88 3.67
4207 6613 3.135994 ACCAGTTTAGTTAGCGTTGGTG 58.864 45.455 0.00 0.00 36.20 4.17
4208 6614 3.181463 ACCAGTTTAGTTAGCGTTGGTGA 60.181 43.478 0.00 0.00 36.20 4.02
4209 6615 4.000988 CCAGTTTAGTTAGCGTTGGTGAT 58.999 43.478 0.00 0.00 0.00 3.06
4210 6616 4.092968 CCAGTTTAGTTAGCGTTGGTGATC 59.907 45.833 0.00 0.00 0.00 2.92
4211 6617 3.924686 AGTTTAGTTAGCGTTGGTGATCG 59.075 43.478 0.00 0.00 0.00 3.69
4212 6618 3.581024 TTAGTTAGCGTTGGTGATCGT 57.419 42.857 0.00 0.00 0.00 3.73
4213 6619 4.700268 TTAGTTAGCGTTGGTGATCGTA 57.300 40.909 0.00 0.00 0.00 3.43
4214 6620 3.581024 AGTTAGCGTTGGTGATCGTAA 57.419 42.857 0.00 0.00 0.00 3.18
4215 6621 4.119442 AGTTAGCGTTGGTGATCGTAAT 57.881 40.909 0.00 0.00 0.00 1.89
4216 6622 4.501071 AGTTAGCGTTGGTGATCGTAATT 58.499 39.130 0.00 0.00 0.00 1.40
4217 6623 4.933400 AGTTAGCGTTGGTGATCGTAATTT 59.067 37.500 0.00 0.00 0.00 1.82
4218 6624 3.740044 AGCGTTGGTGATCGTAATTTG 57.260 42.857 0.00 0.00 0.00 2.32
4219 6625 3.071479 AGCGTTGGTGATCGTAATTTGT 58.929 40.909 0.00 0.00 0.00 2.83
4220 6626 3.500680 AGCGTTGGTGATCGTAATTTGTT 59.499 39.130 0.00 0.00 0.00 2.83
4221 6627 4.691685 AGCGTTGGTGATCGTAATTTGTTA 59.308 37.500 0.00 0.00 0.00 2.41
4222 6628 4.784550 GCGTTGGTGATCGTAATTTGTTAC 59.215 41.667 0.00 0.00 0.00 2.50
4223 6629 5.390145 GCGTTGGTGATCGTAATTTGTTACT 60.390 40.000 0.00 0.00 0.00 2.24
4224 6630 6.183360 GCGTTGGTGATCGTAATTTGTTACTA 60.183 38.462 0.00 0.00 0.00 1.82
4225 6631 7.168796 CGTTGGTGATCGTAATTTGTTACTAC 58.831 38.462 0.00 0.00 0.00 2.73
4226 6632 7.062605 CGTTGGTGATCGTAATTTGTTACTACT 59.937 37.037 0.00 0.00 0.00 2.57
4227 6633 7.821595 TGGTGATCGTAATTTGTTACTACTG 57.178 36.000 0.00 0.00 0.00 2.74
4228 6634 6.814644 TGGTGATCGTAATTTGTTACTACTGG 59.185 38.462 0.00 0.00 0.00 4.00
4229 6635 7.037438 GGTGATCGTAATTTGTTACTACTGGA 58.963 38.462 0.00 0.00 0.00 3.86
4230 6636 7.709613 GGTGATCGTAATTTGTTACTACTGGAT 59.290 37.037 0.00 0.00 0.00 3.41
4231 6637 9.095065 GTGATCGTAATTTGTTACTACTGGATT 57.905 33.333 0.00 0.00 0.00 3.01
4232 6638 9.661563 TGATCGTAATTTGTTACTACTGGATTT 57.338 29.630 0.00 0.00 0.00 2.17
4236 6642 9.550811 CGTAATTTGTTACTACTGGATTTTTCC 57.449 33.333 0.00 0.00 0.00 3.13
4237 6643 9.850628 GTAATTTGTTACTACTGGATTTTTCCC 57.149 33.333 0.00 0.00 0.00 3.97
4238 6644 6.563222 TTTGTTACTACTGGATTTTTCCCG 57.437 37.500 0.00 0.00 0.00 5.14
4239 6645 4.581868 TGTTACTACTGGATTTTTCCCGG 58.418 43.478 0.00 0.00 36.16 5.73
4240 6646 4.286549 TGTTACTACTGGATTTTTCCCGGA 59.713 41.667 0.73 0.00 34.22 5.14
4241 6647 3.629142 ACTACTGGATTTTTCCCGGAG 57.371 47.619 0.73 0.00 34.22 4.63
4254 6660 3.142393 CGGAGGGACCCATGCTAG 58.858 66.667 14.60 0.00 34.64 3.42
4255 6661 2.511452 CGGAGGGACCCATGCTAGG 61.511 68.421 14.60 0.00 34.64 3.02
4256 6662 2.823758 GGAGGGACCCATGCTAGGC 61.824 68.421 14.60 0.00 0.00 3.93
4257 6663 2.042762 AGGGACCCATGCTAGGCA 59.957 61.111 14.60 0.00 44.86 4.75
4258 6664 1.619363 AGGGACCCATGCTAGGCAA 60.619 57.895 14.60 0.00 43.62 4.52
4259 6665 1.214305 AGGGACCCATGCTAGGCAAA 61.214 55.000 14.60 0.00 43.62 3.68
4260 6666 0.106015 GGGACCCATGCTAGGCAAAT 60.106 55.000 5.33 0.00 43.62 2.32
4261 6667 1.322442 GGACCCATGCTAGGCAAATC 58.678 55.000 0.00 0.00 43.62 2.17
4262 6668 1.410083 GGACCCATGCTAGGCAAATCA 60.410 52.381 0.00 0.00 43.62 2.57
4263 6669 1.678101 GACCCATGCTAGGCAAATCAC 59.322 52.381 0.00 0.00 43.62 3.06
4264 6670 1.285962 ACCCATGCTAGGCAAATCACT 59.714 47.619 0.00 0.00 43.62 3.41
4265 6671 2.291800 ACCCATGCTAGGCAAATCACTT 60.292 45.455 0.00 0.00 43.62 3.16
4266 6672 2.360165 CCCATGCTAGGCAAATCACTTC 59.640 50.000 0.00 0.00 43.62 3.01
4267 6673 2.032550 CCATGCTAGGCAAATCACTTCG 59.967 50.000 0.00 0.00 43.62 3.79
4268 6674 2.760634 TGCTAGGCAAATCACTTCGA 57.239 45.000 0.00 0.00 34.76 3.71
4269 6675 2.621338 TGCTAGGCAAATCACTTCGAG 58.379 47.619 0.00 0.00 34.76 4.04
4270 6676 2.028112 TGCTAGGCAAATCACTTCGAGT 60.028 45.455 0.00 0.00 34.76 4.18
4271 6677 2.605366 GCTAGGCAAATCACTTCGAGTC 59.395 50.000 0.00 0.00 0.00 3.36
4272 6678 3.677424 GCTAGGCAAATCACTTCGAGTCT 60.677 47.826 0.00 0.00 0.00 3.24
4273 6679 2.693069 AGGCAAATCACTTCGAGTCTG 58.307 47.619 0.00 0.00 0.00 3.51
4274 6680 1.734465 GGCAAATCACTTCGAGTCTGG 59.266 52.381 0.00 0.00 0.00 3.86
4275 6681 2.417719 GCAAATCACTTCGAGTCTGGT 58.582 47.619 0.00 0.00 0.00 4.00
4276 6682 2.413453 GCAAATCACTTCGAGTCTGGTC 59.587 50.000 0.00 0.00 0.00 4.02
4277 6683 3.653344 CAAATCACTTCGAGTCTGGTCA 58.347 45.455 0.00 0.00 0.00 4.02
4278 6684 4.248859 CAAATCACTTCGAGTCTGGTCAT 58.751 43.478 0.00 0.00 0.00 3.06
4279 6685 5.410924 CAAATCACTTCGAGTCTGGTCATA 58.589 41.667 0.00 0.00 0.00 2.15
4280 6686 5.661056 AATCACTTCGAGTCTGGTCATAA 57.339 39.130 0.00 0.00 0.00 1.90
4281 6687 4.703645 TCACTTCGAGTCTGGTCATAAG 57.296 45.455 0.00 0.00 0.00 1.73
4282 6688 3.119459 TCACTTCGAGTCTGGTCATAAGC 60.119 47.826 0.00 0.00 0.00 3.09
4283 6689 2.159366 ACTTCGAGTCTGGTCATAAGCG 60.159 50.000 0.00 0.00 0.00 4.68
4284 6690 0.738975 TCGAGTCTGGTCATAAGCGG 59.261 55.000 0.00 0.00 0.00 5.52
4285 6691 0.456221 CGAGTCTGGTCATAAGCGGT 59.544 55.000 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.194597 GGCAACACCCCAGACACA 59.805 61.111 0.00 0.00 0.00 3.72
42 44 3.779759 GTGAAACCATTGCTGTTGAACA 58.220 40.909 0.00 0.00 0.00 3.18
106 108 4.812476 CTCGACGCGGCCCAATCA 62.812 66.667 12.47 0.00 0.00 2.57
143 145 3.450457 AGCCACCAAAGAAACAAATGACA 59.550 39.130 0.00 0.00 0.00 3.58
154 156 0.698238 ACCATAGCAGCCACCAAAGA 59.302 50.000 0.00 0.00 0.00 2.52
189 191 1.643298 CTTAACACAAACGCACGTCG 58.357 50.000 0.00 5.97 45.38 5.12
287 290 3.759618 ACCGACCTGACAAAACTGAAAAA 59.240 39.130 0.00 0.00 0.00 1.94
381 384 4.613944 TGCTGAGTTGAAAGCTGATTTTG 58.386 39.130 0.00 0.00 40.21 2.44
387 390 1.884579 ACCATGCTGAGTTGAAAGCTG 59.115 47.619 0.00 0.00 40.21 4.24
388 391 2.283145 ACCATGCTGAGTTGAAAGCT 57.717 45.000 0.00 0.00 40.21 3.74
490 1505 0.868406 GTATGTATGAGCGCTTGGGC 59.132 55.000 13.26 0.00 0.00 5.36
492 1507 2.032549 GCAAGTATGTATGAGCGCTTGG 60.033 50.000 13.26 0.00 35.31 3.61
537 1552 1.563924 AAGGATAGGGTGTGCGTGTA 58.436 50.000 0.00 0.00 0.00 2.90
564 1583 0.391597 TCGGCTCGGTCTTTTGAAGT 59.608 50.000 0.00 0.00 0.00 3.01
576 1595 5.562506 TCCTAAGATAATATGTCGGCTCG 57.437 43.478 0.00 0.00 0.00 5.03
596 1615 4.511826 CGCCTAGGATGACTTTGTAAATCC 59.488 45.833 14.75 0.00 39.15 3.01
634 1653 7.617723 TGTGCCTTTAGTGGGATGTAATATTTT 59.382 33.333 0.00 0.00 0.00 1.82
638 1657 5.702065 TGTGCCTTTAGTGGGATGTAATA 57.298 39.130 0.00 0.00 0.00 0.98
644 1663 1.747206 GCGATGTGCCTTTAGTGGGAT 60.747 52.381 0.00 0.00 37.76 3.85
658 1677 0.676466 TTCAGCATTTCCGGCGATGT 60.676 50.000 9.30 0.00 36.08 3.06
672 1691 8.816144 TCGCATTATTTTTGGATTTATTTCAGC 58.184 29.630 0.00 0.00 0.00 4.26
741 1760 9.123902 CAATATGTGGTTGGATGATTTTAGAGA 57.876 33.333 0.00 0.00 0.00 3.10
800 1822 5.832539 AGATACCCACTAAAGCATAGCAT 57.167 39.130 0.00 0.00 0.00 3.79
966 1999 2.091885 GGAGAATAATGGCACTTCCCCA 60.092 50.000 0.00 0.00 36.66 4.96
1182 2233 0.031616 AGAGGGATGGAGAGGTGGAC 60.032 60.000 0.00 0.00 0.00 4.02
1233 2284 2.509561 GCGAGGGCGGAGACTTTC 60.510 66.667 0.00 0.00 38.16 2.62
1912 3077 8.472007 AGGAGGTACACAAAATAATTCAACAA 57.528 30.769 0.00 0.00 0.00 2.83
1914 3079 8.336801 AGAGGAGGTACACAAAATAATTCAAC 57.663 34.615 0.00 0.00 0.00 3.18
1915 3080 8.934023 AAGAGGAGGTACACAAAATAATTCAA 57.066 30.769 0.00 0.00 0.00 2.69
1917 3082 8.561738 TGAAGAGGAGGTACACAAAATAATTC 57.438 34.615 0.00 0.00 0.00 2.17
1919 3084 9.533831 AATTGAAGAGGAGGTACACAAAATAAT 57.466 29.630 0.00 0.00 0.00 1.28
1920 3085 8.934023 AATTGAAGAGGAGGTACACAAAATAA 57.066 30.769 0.00 0.00 0.00 1.40
1923 3088 6.460953 GCAAATTGAAGAGGAGGTACACAAAA 60.461 38.462 0.00 0.00 0.00 2.44
1938 3103 5.729883 CGTCGAATAGTTCAGCAAATTGAAG 59.270 40.000 0.00 0.00 37.72 3.02
1986 3359 0.647410 CTTGCTTCCTGCGTGATACG 59.353 55.000 0.00 0.00 46.63 3.06
2024 3397 4.804139 CGTAATGGACACACATAGAAGGAC 59.196 45.833 0.00 0.00 0.00 3.85
2035 3408 2.103432 ACAGAACACCGTAATGGACACA 59.897 45.455 0.00 0.00 42.00 3.72
2106 3479 4.067972 TGTGTTGTCTTCTCCTTACCAC 57.932 45.455 0.00 0.00 0.00 4.16
2374 3765 0.840617 TCCACTTGCCTTGTACACCA 59.159 50.000 0.00 0.00 0.00 4.17
2518 3957 0.823356 GAACTCAACAAGCCCCTGCA 60.823 55.000 0.00 0.00 41.13 4.41
3722 6128 0.605589 CTCGGGCGGTTCCTCTTTTT 60.606 55.000 0.00 0.00 34.39 1.94
3723 6129 1.003718 CTCGGGCGGTTCCTCTTTT 60.004 57.895 0.00 0.00 34.39 2.27
3724 6130 2.663196 CTCGGGCGGTTCCTCTTT 59.337 61.111 0.00 0.00 34.39 2.52
3725 6131 3.391382 CCTCGGGCGGTTCCTCTT 61.391 66.667 0.00 0.00 34.39 2.85
3777 6183 3.291611 CCTCATTTGGCACCCTGC 58.708 61.111 0.00 0.00 44.08 4.85
3785 6191 0.590195 GATAGCAGCGCCTCATTTGG 59.410 55.000 2.29 0.00 0.00 3.28
3786 6192 0.234106 CGATAGCAGCGCCTCATTTG 59.766 55.000 2.29 0.00 0.00 2.32
3787 6193 2.609825 CGATAGCAGCGCCTCATTT 58.390 52.632 2.29 0.00 0.00 2.32
3788 6194 4.350620 CGATAGCAGCGCCTCATT 57.649 55.556 2.29 0.00 0.00 2.57
3800 6206 1.280886 GCTCATGCACCTCGCGATAG 61.281 60.000 10.36 7.05 46.97 2.08
3801 6207 1.300156 GCTCATGCACCTCGCGATA 60.300 57.895 10.36 0.00 46.97 2.92
3802 6208 1.738346 TAGCTCATGCACCTCGCGAT 61.738 55.000 10.36 0.00 46.97 4.58
3803 6209 2.414785 TAGCTCATGCACCTCGCGA 61.415 57.895 9.26 9.26 46.97 5.87
3804 6210 2.104928 TAGCTCATGCACCTCGCG 59.895 61.111 0.00 0.00 46.97 5.87
3805 6211 0.873743 GAGTAGCTCATGCACCTCGC 60.874 60.000 0.00 0.00 42.74 5.03
3806 6212 0.457443 TGAGTAGCTCATGCACCTCG 59.543 55.000 0.00 0.00 42.74 4.63
3807 6213 2.275318 GTTGAGTAGCTCATGCACCTC 58.725 52.381 0.00 0.00 40.39 3.85
3808 6214 1.065854 GGTTGAGTAGCTCATGCACCT 60.066 52.381 9.86 0.00 40.39 4.00
3809 6215 1.339055 TGGTTGAGTAGCTCATGCACC 60.339 52.381 10.10 10.10 40.39 5.01
3810 6216 1.734465 GTGGTTGAGTAGCTCATGCAC 59.266 52.381 0.00 0.00 40.39 4.57
3811 6217 1.672737 CGTGGTTGAGTAGCTCATGCA 60.673 52.381 0.00 0.00 40.39 3.96
3812 6218 1.002366 CGTGGTTGAGTAGCTCATGC 58.998 55.000 0.00 0.00 40.39 4.06
3813 6219 2.263077 GACGTGGTTGAGTAGCTCATG 58.737 52.381 0.00 0.00 40.39 3.07
3814 6220 1.893137 TGACGTGGTTGAGTAGCTCAT 59.107 47.619 0.00 0.00 40.39 2.90
3815 6221 1.269723 CTGACGTGGTTGAGTAGCTCA 59.730 52.381 0.00 0.00 38.87 4.26
3816 6222 1.402984 CCTGACGTGGTTGAGTAGCTC 60.403 57.143 0.00 0.00 0.00 4.09
3817 6223 0.603569 CCTGACGTGGTTGAGTAGCT 59.396 55.000 0.00 0.00 0.00 3.32
3818 6224 1.014564 GCCTGACGTGGTTGAGTAGC 61.015 60.000 0.00 0.00 0.00 3.58
3819 6225 0.603569 AGCCTGACGTGGTTGAGTAG 59.396 55.000 0.00 0.00 0.00 2.57
3820 6226 0.601558 GAGCCTGACGTGGTTGAGTA 59.398 55.000 0.00 0.00 0.00 2.59
3821 6227 1.367840 GAGCCTGACGTGGTTGAGT 59.632 57.895 0.00 0.00 0.00 3.41
3822 6228 1.734477 CGAGCCTGACGTGGTTGAG 60.734 63.158 0.00 0.00 0.00 3.02
3823 6229 2.338620 CGAGCCTGACGTGGTTGA 59.661 61.111 0.00 0.00 0.00 3.18
3824 6230 2.029073 ACGAGCCTGACGTGGTTG 59.971 61.111 0.00 0.00 42.37 3.77
3836 6242 2.023320 GCTTAATGGCGCACGAGC 59.977 61.111 10.83 7.24 37.42 5.03
3837 6243 0.041839 GATGCTTAATGGCGCACGAG 60.042 55.000 10.83 0.00 39.21 4.18
3838 6244 1.436195 GGATGCTTAATGGCGCACGA 61.436 55.000 10.83 0.00 39.21 4.35
3839 6245 1.009675 GGATGCTTAATGGCGCACG 60.010 57.895 10.83 0.00 39.21 5.34
3840 6246 0.248621 GTGGATGCTTAATGGCGCAC 60.249 55.000 10.83 0.00 39.21 5.34
3841 6247 1.383456 GGTGGATGCTTAATGGCGCA 61.383 55.000 10.83 0.00 40.87 6.09
3842 6248 1.360192 GGTGGATGCTTAATGGCGC 59.640 57.895 0.00 0.00 34.52 6.53
3843 6249 1.267806 GATGGTGGATGCTTAATGGCG 59.732 52.381 0.00 0.00 34.52 5.69
3844 6250 2.035066 GTGATGGTGGATGCTTAATGGC 59.965 50.000 0.00 0.00 0.00 4.40
3845 6251 2.624838 GGTGATGGTGGATGCTTAATGG 59.375 50.000 0.00 0.00 0.00 3.16
3846 6252 2.291465 CGGTGATGGTGGATGCTTAATG 59.709 50.000 0.00 0.00 0.00 1.90
3847 6253 2.575532 CGGTGATGGTGGATGCTTAAT 58.424 47.619 0.00 0.00 0.00 1.40
3848 6254 2.016604 GCGGTGATGGTGGATGCTTAA 61.017 52.381 0.00 0.00 0.00 1.85
3849 6255 0.463654 GCGGTGATGGTGGATGCTTA 60.464 55.000 0.00 0.00 0.00 3.09
3850 6256 1.750399 GCGGTGATGGTGGATGCTT 60.750 57.895 0.00 0.00 0.00 3.91
3851 6257 2.124570 GCGGTGATGGTGGATGCT 60.125 61.111 0.00 0.00 0.00 3.79
3852 6258 3.211963 GGCGGTGATGGTGGATGC 61.212 66.667 0.00 0.00 0.00 3.91
3853 6259 2.896854 CGGCGGTGATGGTGGATG 60.897 66.667 0.00 0.00 0.00 3.51
3854 6260 4.856801 GCGGCGGTGATGGTGGAT 62.857 66.667 9.78 0.00 0.00 3.41
3884 6290 0.165944 CGAAGACCACGACAAATGGC 59.834 55.000 0.00 0.00 41.31 4.40
3885 6291 0.165944 GCGAAGACCACGACAAATGG 59.834 55.000 0.00 0.00 43.43 3.16
3886 6292 0.165944 GGCGAAGACCACGACAAATG 59.834 55.000 0.00 0.00 38.75 2.32
3887 6293 1.289109 CGGCGAAGACCACGACAAAT 61.289 55.000 0.00 0.00 38.84 2.32
3888 6294 1.952133 CGGCGAAGACCACGACAAA 60.952 57.895 0.00 0.00 38.84 2.83
3889 6295 2.355363 CGGCGAAGACCACGACAA 60.355 61.111 0.00 0.00 38.84 3.18
3890 6296 4.351938 CCGGCGAAGACCACGACA 62.352 66.667 9.30 0.00 38.84 4.35
3891 6297 2.830704 AATCCGGCGAAGACCACGAC 62.831 60.000 9.30 0.00 35.25 4.34
3892 6298 2.162338 AAATCCGGCGAAGACCACGA 62.162 55.000 9.30 0.00 0.00 4.35
3893 6299 0.458889 TAAATCCGGCGAAGACCACG 60.459 55.000 9.30 0.00 0.00 4.94
3894 6300 1.134907 TCTAAATCCGGCGAAGACCAC 60.135 52.381 9.30 0.00 0.00 4.16
3895 6301 1.136305 CTCTAAATCCGGCGAAGACCA 59.864 52.381 9.30 0.00 0.00 4.02
3896 6302 1.854227 CTCTAAATCCGGCGAAGACC 58.146 55.000 9.30 0.00 0.00 3.85
3897 6303 1.202428 AGCTCTAAATCCGGCGAAGAC 60.202 52.381 9.30 0.00 0.00 3.01
3898 6304 1.112113 AGCTCTAAATCCGGCGAAGA 58.888 50.000 9.30 0.00 0.00 2.87
3899 6305 1.212616 CAGCTCTAAATCCGGCGAAG 58.787 55.000 9.30 0.00 0.00 3.79
3900 6306 0.535335 ACAGCTCTAAATCCGGCGAA 59.465 50.000 9.30 0.00 0.00 4.70
3901 6307 0.102481 GACAGCTCTAAATCCGGCGA 59.898 55.000 9.30 0.00 0.00 5.54
3902 6308 1.209275 CGACAGCTCTAAATCCGGCG 61.209 60.000 0.00 0.00 0.00 6.46
3903 6309 0.179108 ACGACAGCTCTAAATCCGGC 60.179 55.000 0.00 0.00 0.00 6.13
3904 6310 1.135083 ACACGACAGCTCTAAATCCGG 60.135 52.381 0.00 0.00 0.00 5.14
3905 6311 1.920574 CACACGACAGCTCTAAATCCG 59.079 52.381 0.00 0.00 0.00 4.18
3906 6312 2.960819 ACACACGACAGCTCTAAATCC 58.039 47.619 0.00 0.00 0.00 3.01
3907 6313 3.548268 GCTACACACGACAGCTCTAAATC 59.452 47.826 0.00 0.00 32.46 2.17
3908 6314 3.056821 TGCTACACACGACAGCTCTAAAT 60.057 43.478 0.00 0.00 36.26 1.40
3909 6315 2.295070 TGCTACACACGACAGCTCTAAA 59.705 45.455 0.00 0.00 36.26 1.85
3910 6316 1.883926 TGCTACACACGACAGCTCTAA 59.116 47.619 0.00 0.00 36.26 2.10
3911 6317 1.530323 TGCTACACACGACAGCTCTA 58.470 50.000 0.00 0.00 36.26 2.43
3912 6318 0.673985 TTGCTACACACGACAGCTCT 59.326 50.000 0.00 0.00 36.26 4.09
3913 6319 1.063806 CTTGCTACACACGACAGCTC 58.936 55.000 0.00 0.00 36.26 4.09
3914 6320 0.319900 CCTTGCTACACACGACAGCT 60.320 55.000 0.00 0.00 36.26 4.24
3915 6321 1.291877 CCCTTGCTACACACGACAGC 61.292 60.000 0.00 0.00 35.82 4.40
3916 6322 0.670546 CCCCTTGCTACACACGACAG 60.671 60.000 0.00 0.00 0.00 3.51
3917 6323 1.116536 TCCCCTTGCTACACACGACA 61.117 55.000 0.00 0.00 0.00 4.35
3918 6324 0.249398 ATCCCCTTGCTACACACGAC 59.751 55.000 0.00 0.00 0.00 4.34
3919 6325 0.981183 AATCCCCTTGCTACACACGA 59.019 50.000 0.00 0.00 0.00 4.35
3920 6326 1.737793 GAAATCCCCTTGCTACACACG 59.262 52.381 0.00 0.00 0.00 4.49
3921 6327 2.749621 CAGAAATCCCCTTGCTACACAC 59.250 50.000 0.00 0.00 0.00 3.82
3922 6328 2.375174 ACAGAAATCCCCTTGCTACACA 59.625 45.455 0.00 0.00 0.00 3.72
3923 6329 3.073274 ACAGAAATCCCCTTGCTACAC 57.927 47.619 0.00 0.00 0.00 2.90
3924 6330 4.919774 TTACAGAAATCCCCTTGCTACA 57.080 40.909 0.00 0.00 0.00 2.74
3925 6331 7.502561 ACATATTTACAGAAATCCCCTTGCTAC 59.497 37.037 0.00 0.00 36.62 3.58
3926 6332 7.582719 ACATATTTACAGAAATCCCCTTGCTA 58.417 34.615 0.00 0.00 36.62 3.49
3927 6333 6.435164 ACATATTTACAGAAATCCCCTTGCT 58.565 36.000 0.00 0.00 36.62 3.91
3928 6334 6.715347 ACATATTTACAGAAATCCCCTTGC 57.285 37.500 0.00 0.00 36.62 4.01
3931 6337 9.990868 ACTTAAACATATTTACAGAAATCCCCT 57.009 29.630 0.00 0.00 36.62 4.79
3934 6340 9.516314 GCCACTTAAACATATTTACAGAAATCC 57.484 33.333 0.00 0.00 36.62 3.01
3939 6345 9.337396 CCATAGCCACTTAAACATATTTACAGA 57.663 33.333 0.00 0.00 29.77 3.41
3940 6346 8.567948 CCCATAGCCACTTAAACATATTTACAG 58.432 37.037 0.00 0.00 29.77 2.74
3941 6347 7.504238 CCCCATAGCCACTTAAACATATTTACA 59.496 37.037 0.00 0.00 29.77 2.41
3942 6348 7.523216 GCCCCATAGCCACTTAAACATATTTAC 60.523 40.741 0.00 0.00 29.77 2.01
3943 6349 6.492087 GCCCCATAGCCACTTAAACATATTTA 59.508 38.462 0.00 0.00 0.00 1.40
3944 6350 5.304357 GCCCCATAGCCACTTAAACATATTT 59.696 40.000 0.00 0.00 0.00 1.40
3945 6351 4.832823 GCCCCATAGCCACTTAAACATATT 59.167 41.667 0.00 0.00 0.00 1.28
3946 6352 4.141041 TGCCCCATAGCCACTTAAACATAT 60.141 41.667 0.00 0.00 0.00 1.78
3947 6353 3.203263 TGCCCCATAGCCACTTAAACATA 59.797 43.478 0.00 0.00 0.00 2.29
3948 6354 2.024464 TGCCCCATAGCCACTTAAACAT 60.024 45.455 0.00 0.00 0.00 2.71
3949 6355 1.356059 TGCCCCATAGCCACTTAAACA 59.644 47.619 0.00 0.00 0.00 2.83
3950 6356 2.137810 TGCCCCATAGCCACTTAAAC 57.862 50.000 0.00 0.00 0.00 2.01
3951 6357 2.513738 AGATGCCCCATAGCCACTTAAA 59.486 45.455 0.00 0.00 0.00 1.52
3952 6358 2.135189 AGATGCCCCATAGCCACTTAA 58.865 47.619 0.00 0.00 0.00 1.85
3953 6359 1.819753 AGATGCCCCATAGCCACTTA 58.180 50.000 0.00 0.00 0.00 2.24
3954 6360 1.819753 TAGATGCCCCATAGCCACTT 58.180 50.000 0.00 0.00 0.00 3.16
3955 6361 1.421646 GTTAGATGCCCCATAGCCACT 59.578 52.381 0.00 0.00 0.00 4.00
3956 6362 1.421646 AGTTAGATGCCCCATAGCCAC 59.578 52.381 0.00 0.00 0.00 5.01
3957 6363 1.819753 AGTTAGATGCCCCATAGCCA 58.180 50.000 0.00 0.00 0.00 4.75
3958 6364 2.373502 AGAAGTTAGATGCCCCATAGCC 59.626 50.000 0.00 0.00 0.00 3.93
3959 6365 3.778954 AGAAGTTAGATGCCCCATAGC 57.221 47.619 0.00 0.00 0.00 2.97
3960 6366 7.251321 AGATAAGAAGTTAGATGCCCCATAG 57.749 40.000 0.00 0.00 0.00 2.23
3961 6367 8.736097 TTAGATAAGAAGTTAGATGCCCCATA 57.264 34.615 0.00 0.00 0.00 2.74
3962 6368 7.633018 TTAGATAAGAAGTTAGATGCCCCAT 57.367 36.000 0.00 0.00 0.00 4.00
3963 6369 7.256691 GGATTAGATAAGAAGTTAGATGCCCCA 60.257 40.741 0.00 0.00 0.00 4.96
3964 6370 7.106890 GGATTAGATAAGAAGTTAGATGCCCC 58.893 42.308 0.00 0.00 0.00 5.80
3965 6371 6.814146 CGGATTAGATAAGAAGTTAGATGCCC 59.186 42.308 0.00 0.00 0.00 5.36
3966 6372 7.379750 ACGGATTAGATAAGAAGTTAGATGCC 58.620 38.462 0.00 0.00 0.00 4.40
3967 6373 7.542824 GGACGGATTAGATAAGAAGTTAGATGC 59.457 40.741 0.00 0.00 0.00 3.91
3968 6374 8.577296 TGGACGGATTAGATAAGAAGTTAGATG 58.423 37.037 0.00 0.00 0.00 2.90
3969 6375 8.707796 TGGACGGATTAGATAAGAAGTTAGAT 57.292 34.615 0.00 0.00 0.00 1.98
3970 6376 8.707796 ATGGACGGATTAGATAAGAAGTTAGA 57.292 34.615 0.00 0.00 0.00 2.10
3971 6377 8.798402 AGATGGACGGATTAGATAAGAAGTTAG 58.202 37.037 0.00 0.00 0.00 2.34
3972 6378 8.707796 AGATGGACGGATTAGATAAGAAGTTA 57.292 34.615 0.00 0.00 0.00 2.24
3973 6379 7.604657 AGATGGACGGATTAGATAAGAAGTT 57.395 36.000 0.00 0.00 0.00 2.66
3974 6380 7.177041 GGTAGATGGACGGATTAGATAAGAAGT 59.823 40.741 0.00 0.00 0.00 3.01
3975 6381 7.176865 TGGTAGATGGACGGATTAGATAAGAAG 59.823 40.741 0.00 0.00 0.00 2.85
3976 6382 7.008332 TGGTAGATGGACGGATTAGATAAGAA 58.992 38.462 0.00 0.00 0.00 2.52
3977 6383 6.549242 TGGTAGATGGACGGATTAGATAAGA 58.451 40.000 0.00 0.00 0.00 2.10
3978 6384 6.835819 TGGTAGATGGACGGATTAGATAAG 57.164 41.667 0.00 0.00 0.00 1.73
3979 6385 6.380274 GGATGGTAGATGGACGGATTAGATAA 59.620 42.308 0.00 0.00 0.00 1.75
3980 6386 5.892119 GGATGGTAGATGGACGGATTAGATA 59.108 44.000 0.00 0.00 0.00 1.98
3981 6387 4.712337 GGATGGTAGATGGACGGATTAGAT 59.288 45.833 0.00 0.00 0.00 1.98
3982 6388 4.087182 GGATGGTAGATGGACGGATTAGA 58.913 47.826 0.00 0.00 0.00 2.10
3983 6389 3.119459 CGGATGGTAGATGGACGGATTAG 60.119 52.174 0.00 0.00 0.00 1.73
3984 6390 2.823747 CGGATGGTAGATGGACGGATTA 59.176 50.000 0.00 0.00 0.00 1.75
3985 6391 1.618837 CGGATGGTAGATGGACGGATT 59.381 52.381 0.00 0.00 0.00 3.01
3986 6392 1.257743 CGGATGGTAGATGGACGGAT 58.742 55.000 0.00 0.00 0.00 4.18
3987 6393 0.826256 CCGGATGGTAGATGGACGGA 60.826 60.000 0.00 0.00 42.19 4.69
3988 6394 1.666011 CCGGATGGTAGATGGACGG 59.334 63.158 0.00 0.00 0.00 4.79
4000 6406 2.124983 CACCAGAGCCACCGGATG 60.125 66.667 9.46 2.15 0.00 3.51
4001 6407 2.815684 TACCACCAGAGCCACCGGAT 62.816 60.000 9.46 0.00 0.00 4.18
4002 6408 3.533079 TACCACCAGAGCCACCGGA 62.533 63.158 9.46 0.00 0.00 5.14
4003 6409 2.521958 CTTACCACCAGAGCCACCGG 62.522 65.000 0.00 0.00 0.00 5.28
4004 6410 1.079127 CTTACCACCAGAGCCACCG 60.079 63.158 0.00 0.00 0.00 4.94
4005 6411 0.400594 AACTTACCACCAGAGCCACC 59.599 55.000 0.00 0.00 0.00 4.61
4006 6412 2.152016 GAAACTTACCACCAGAGCCAC 58.848 52.381 0.00 0.00 0.00 5.01
4007 6413 1.073284 GGAAACTTACCACCAGAGCCA 59.927 52.381 0.00 0.00 0.00 4.75
4008 6414 1.073284 TGGAAACTTACCACCAGAGCC 59.927 52.381 0.00 0.00 32.03 4.70
4009 6415 2.561478 TGGAAACTTACCACCAGAGC 57.439 50.000 0.00 0.00 32.03 4.09
4013 6419 5.300792 GTGAAAATCTGGAAACTTACCACCA 59.699 40.000 0.00 0.00 33.57 4.17
4014 6420 5.535030 AGTGAAAATCTGGAAACTTACCACC 59.465 40.000 0.00 0.00 33.57 4.61
4015 6421 6.262273 TCAGTGAAAATCTGGAAACTTACCAC 59.738 38.462 0.00 0.00 34.15 4.16
4016 6422 6.361433 TCAGTGAAAATCTGGAAACTTACCA 58.639 36.000 0.00 0.00 34.15 3.25
4017 6423 6.877611 TCAGTGAAAATCTGGAAACTTACC 57.122 37.500 0.00 0.00 34.15 2.85
4020 6426 9.750125 GTTAATTCAGTGAAAATCTGGAAACTT 57.250 29.630 10.14 0.00 34.15 2.66
4021 6427 8.076178 CGTTAATTCAGTGAAAATCTGGAAACT 58.924 33.333 10.14 0.00 34.15 2.66
4022 6428 7.860872 ACGTTAATTCAGTGAAAATCTGGAAAC 59.139 33.333 10.14 5.16 34.15 2.78
4023 6429 7.936584 ACGTTAATTCAGTGAAAATCTGGAAA 58.063 30.769 10.14 0.00 34.15 3.13
4024 6430 7.504924 ACGTTAATTCAGTGAAAATCTGGAA 57.495 32.000 10.14 0.00 34.15 3.53
4025 6431 7.504924 AACGTTAATTCAGTGAAAATCTGGA 57.495 32.000 10.14 0.00 34.15 3.86
4026 6432 8.574196 AAAACGTTAATTCAGTGAAAATCTGG 57.426 30.769 10.14 1.07 34.15 3.86
4027 6433 9.232082 TGAAAACGTTAATTCAGTGAAAATCTG 57.768 29.630 10.14 3.17 32.14 2.90
4028 6434 9.233232 GTGAAAACGTTAATTCAGTGAAAATCT 57.767 29.630 14.17 0.00 36.31 2.40
4029 6435 8.476925 GGTGAAAACGTTAATTCAGTGAAAATC 58.523 33.333 14.17 2.58 36.31 2.17
4030 6436 8.194769 AGGTGAAAACGTTAATTCAGTGAAAAT 58.805 29.630 14.17 4.76 36.31 1.82
4031 6437 7.486551 CAGGTGAAAACGTTAATTCAGTGAAAA 59.513 33.333 14.17 0.00 36.31 2.29
4032 6438 6.970043 CAGGTGAAAACGTTAATTCAGTGAAA 59.030 34.615 14.17 0.00 36.31 2.69
4033 6439 6.316640 TCAGGTGAAAACGTTAATTCAGTGAA 59.683 34.615 14.17 8.27 36.31 3.18
4034 6440 5.818336 TCAGGTGAAAACGTTAATTCAGTGA 59.182 36.000 14.17 15.57 36.31 3.41
4035 6441 6.055231 TCAGGTGAAAACGTTAATTCAGTG 57.945 37.500 14.17 13.98 36.31 3.66
4036 6442 6.877611 ATCAGGTGAAAACGTTAATTCAGT 57.122 33.333 14.17 4.27 36.31 3.41
4037 6443 8.029642 AGTATCAGGTGAAAACGTTAATTCAG 57.970 34.615 14.17 5.26 36.31 3.02
4038 6444 7.972832 AGTATCAGGTGAAAACGTTAATTCA 57.027 32.000 10.60 10.60 33.37 2.57
4039 6445 7.686938 CGAAGTATCAGGTGAAAACGTTAATTC 59.313 37.037 0.00 3.22 0.00 2.17
4040 6446 7.515643 CGAAGTATCAGGTGAAAACGTTAATT 58.484 34.615 0.00 0.00 0.00 1.40
4041 6447 6.401796 GCGAAGTATCAGGTGAAAACGTTAAT 60.402 38.462 0.00 0.00 0.00 1.40
4042 6448 5.107375 GCGAAGTATCAGGTGAAAACGTTAA 60.107 40.000 0.00 0.00 0.00 2.01
4043 6449 4.386652 GCGAAGTATCAGGTGAAAACGTTA 59.613 41.667 0.00 0.00 0.00 3.18
4044 6450 3.185797 GCGAAGTATCAGGTGAAAACGTT 59.814 43.478 0.00 0.00 0.00 3.99
4045 6451 2.735134 GCGAAGTATCAGGTGAAAACGT 59.265 45.455 0.00 0.00 0.00 3.99
4046 6452 2.093783 GGCGAAGTATCAGGTGAAAACG 59.906 50.000 0.00 0.00 0.00 3.60
4047 6453 2.418976 GGGCGAAGTATCAGGTGAAAAC 59.581 50.000 0.00 0.00 0.00 2.43
4048 6454 2.039216 TGGGCGAAGTATCAGGTGAAAA 59.961 45.455 0.00 0.00 0.00 2.29
4049 6455 1.626321 TGGGCGAAGTATCAGGTGAAA 59.374 47.619 0.00 0.00 0.00 2.69
4050 6456 1.271856 TGGGCGAAGTATCAGGTGAA 58.728 50.000 0.00 0.00 0.00 3.18
4051 6457 1.138859 CATGGGCGAAGTATCAGGTGA 59.861 52.381 0.00 0.00 0.00 4.02
4052 6458 1.134401 ACATGGGCGAAGTATCAGGTG 60.134 52.381 0.00 0.00 0.00 4.00
4053 6459 1.204146 ACATGGGCGAAGTATCAGGT 58.796 50.000 0.00 0.00 0.00 4.00
4054 6460 2.365617 ACTACATGGGCGAAGTATCAGG 59.634 50.000 0.00 0.00 0.00 3.86
4055 6461 3.735237 ACTACATGGGCGAAGTATCAG 57.265 47.619 0.00 0.00 0.00 2.90
4056 6462 5.538118 CATTACTACATGGGCGAAGTATCA 58.462 41.667 0.00 0.00 0.00 2.15
4057 6463 4.389077 GCATTACTACATGGGCGAAGTATC 59.611 45.833 0.00 0.00 0.00 2.24
4058 6464 4.202315 TGCATTACTACATGGGCGAAGTAT 60.202 41.667 0.00 0.00 0.00 2.12
4059 6465 3.133183 TGCATTACTACATGGGCGAAGTA 59.867 43.478 0.00 0.00 0.00 2.24
4060 6466 2.093181 TGCATTACTACATGGGCGAAGT 60.093 45.455 0.00 0.00 0.00 3.01
4061 6467 2.560504 TGCATTACTACATGGGCGAAG 58.439 47.619 0.00 0.00 0.00 3.79
4062 6468 2.700722 TGCATTACTACATGGGCGAA 57.299 45.000 0.00 0.00 0.00 4.70
4063 6469 2.928801 ATGCATTACTACATGGGCGA 57.071 45.000 0.00 0.00 0.00 5.54
4064 6470 4.404507 GTAATGCATTACTACATGGGCG 57.595 45.455 32.84 0.00 39.53 6.13
4076 6482 9.784531 ACTATTATCAAGCAGTAGTAATGCATT 57.215 29.630 23.25 17.56 46.31 3.56
4077 6483 9.212641 CACTATTATCAAGCAGTAGTAATGCAT 57.787 33.333 23.25 9.93 46.31 3.96
4078 6484 8.421002 TCACTATTATCAAGCAGTAGTAATGCA 58.579 33.333 23.25 4.53 46.31 3.96
4079 6485 8.704234 GTCACTATTATCAAGCAGTAGTAATGC 58.296 37.037 14.59 14.59 44.18 3.56
4080 6486 9.197694 GGTCACTATTATCAAGCAGTAGTAATG 57.802 37.037 0.00 0.00 0.00 1.90
4081 6487 9.148879 AGGTCACTATTATCAAGCAGTAGTAAT 57.851 33.333 0.00 0.00 0.00 1.89
4082 6488 8.534954 AGGTCACTATTATCAAGCAGTAGTAA 57.465 34.615 0.00 0.00 0.00 2.24
4083 6489 9.286170 CTAGGTCACTATTATCAAGCAGTAGTA 57.714 37.037 0.00 0.00 0.00 1.82
4084 6490 7.780745 ACTAGGTCACTATTATCAAGCAGTAGT 59.219 37.037 0.00 0.00 0.00 2.73
4085 6491 8.172352 ACTAGGTCACTATTATCAAGCAGTAG 57.828 38.462 0.00 0.00 0.00 2.57
4086 6492 9.636789 TTACTAGGTCACTATTATCAAGCAGTA 57.363 33.333 0.00 0.00 0.00 2.74
4087 6493 8.534954 TTACTAGGTCACTATTATCAAGCAGT 57.465 34.615 0.00 0.00 0.00 4.40
4088 6494 9.988815 ATTTACTAGGTCACTATTATCAAGCAG 57.011 33.333 0.00 0.00 0.00 4.24
4089 6495 9.982651 GATTTACTAGGTCACTATTATCAAGCA 57.017 33.333 0.00 0.00 0.00 3.91
4098 6504 9.787435 CTGAGTCTAGATTTACTAGGTCACTAT 57.213 37.037 0.00 0.00 46.08 2.12
4099 6505 8.990203 TCTGAGTCTAGATTTACTAGGTCACTA 58.010 37.037 0.00 0.00 46.08 2.74
4100 6506 7.863722 TCTGAGTCTAGATTTACTAGGTCACT 58.136 38.462 0.00 0.00 46.08 3.41
4101 6507 8.564574 CATCTGAGTCTAGATTTACTAGGTCAC 58.435 40.741 0.00 0.00 46.08 3.67
4102 6508 8.275758 ACATCTGAGTCTAGATTTACTAGGTCA 58.724 37.037 0.00 0.00 46.08 4.02
4103 6509 8.564574 CACATCTGAGTCTAGATTTACTAGGTC 58.435 40.741 0.00 0.00 46.08 3.85
4104 6510 7.504238 CCACATCTGAGTCTAGATTTACTAGGT 59.496 40.741 0.00 0.00 46.08 3.08
4105 6511 7.504238 ACCACATCTGAGTCTAGATTTACTAGG 59.496 40.741 0.00 0.00 46.08 3.02
4107 6513 9.916360 TTACCACATCTGAGTCTAGATTTACTA 57.084 33.333 0.00 0.00 35.28 1.82
4108 6514 8.824756 TTACCACATCTGAGTCTAGATTTACT 57.175 34.615 0.00 0.00 35.28 2.24
4109 6515 9.469807 CATTACCACATCTGAGTCTAGATTTAC 57.530 37.037 0.00 0.00 35.28 2.01
4110 6516 8.144478 GCATTACCACATCTGAGTCTAGATTTA 58.856 37.037 0.00 0.00 35.28 1.40
4111 6517 6.989169 GCATTACCACATCTGAGTCTAGATTT 59.011 38.462 0.00 0.00 35.28 2.17
4112 6518 6.098838 TGCATTACCACATCTGAGTCTAGATT 59.901 38.462 0.00 0.00 35.28 2.40
4113 6519 5.600069 TGCATTACCACATCTGAGTCTAGAT 59.400 40.000 0.00 0.00 37.90 1.98
4114 6520 4.956075 TGCATTACCACATCTGAGTCTAGA 59.044 41.667 0.00 0.00 0.00 2.43
4115 6521 5.268118 TGCATTACCACATCTGAGTCTAG 57.732 43.478 0.00 0.00 0.00 2.43
4116 6522 5.876651 ATGCATTACCACATCTGAGTCTA 57.123 39.130 0.00 0.00 0.00 2.59
4117 6523 4.767578 ATGCATTACCACATCTGAGTCT 57.232 40.909 0.00 0.00 0.00 3.24
4118 6524 4.274459 GGAATGCATTACCACATCTGAGTC 59.726 45.833 12.97 0.00 0.00 3.36
4119 6525 4.080129 AGGAATGCATTACCACATCTGAGT 60.080 41.667 18.34 0.00 0.00 3.41
4120 6526 4.458397 AGGAATGCATTACCACATCTGAG 58.542 43.478 18.34 0.00 0.00 3.35
4121 6527 4.508551 AGGAATGCATTACCACATCTGA 57.491 40.909 18.34 0.00 0.00 3.27
4122 6528 5.237996 CAGTAGGAATGCATTACCACATCTG 59.762 44.000 20.39 15.42 0.00 2.90
4123 6529 5.104360 ACAGTAGGAATGCATTACCACATCT 60.104 40.000 20.39 8.83 0.00 2.90
4124 6530 5.126067 ACAGTAGGAATGCATTACCACATC 58.874 41.667 20.39 3.56 0.00 3.06
4125 6531 5.116084 ACAGTAGGAATGCATTACCACAT 57.884 39.130 20.39 7.02 0.00 3.21
4126 6532 4.568072 ACAGTAGGAATGCATTACCACA 57.432 40.909 20.39 3.80 0.00 4.17
4127 6533 8.848474 ATATAACAGTAGGAATGCATTACCAC 57.152 34.615 18.34 14.98 0.00 4.16
4145 6551 5.956642 TGTCACTGTCGCTGTTATATAACA 58.043 37.500 23.51 23.51 43.32 2.41
4146 6552 7.464830 AATGTCACTGTCGCTGTTATATAAC 57.535 36.000 17.18 17.18 36.74 1.89
4147 6553 8.410912 AGTAATGTCACTGTCGCTGTTATATAA 58.589 33.333 0.00 0.00 0.00 0.98
4148 6554 7.937649 AGTAATGTCACTGTCGCTGTTATATA 58.062 34.615 0.00 0.00 0.00 0.86
4149 6555 6.806751 AGTAATGTCACTGTCGCTGTTATAT 58.193 36.000 0.00 0.00 0.00 0.86
4150 6556 6.203808 AGTAATGTCACTGTCGCTGTTATA 57.796 37.500 0.00 0.00 0.00 0.98
4151 6557 5.073311 AGTAATGTCACTGTCGCTGTTAT 57.927 39.130 0.00 0.00 0.00 1.89
4152 6558 4.514781 AGTAATGTCACTGTCGCTGTTA 57.485 40.909 0.00 0.00 0.00 2.41
4153 6559 3.386768 AGTAATGTCACTGTCGCTGTT 57.613 42.857 0.00 0.00 0.00 3.16
4154 6560 4.720649 ATAGTAATGTCACTGTCGCTGT 57.279 40.909 0.00 0.00 0.00 4.40
4155 6561 5.576774 TGAAATAGTAATGTCACTGTCGCTG 59.423 40.000 0.00 0.00 0.00 5.18
4156 6562 5.720202 TGAAATAGTAATGTCACTGTCGCT 58.280 37.500 0.00 0.00 0.00 4.93
4157 6563 6.036083 ACATGAAATAGTAATGTCACTGTCGC 59.964 38.462 0.00 0.00 31.99 5.19
4158 6564 7.525688 ACATGAAATAGTAATGTCACTGTCG 57.474 36.000 0.00 0.00 31.99 4.35
4159 6565 9.803315 TCTACATGAAATAGTAATGTCACTGTC 57.197 33.333 0.00 0.00 31.99 3.51
4162 6568 9.601217 GGTTCTACATGAAATAGTAATGTCACT 57.399 33.333 0.00 0.00 31.99 3.41
4163 6569 9.378551 TGGTTCTACATGAAATAGTAATGTCAC 57.621 33.333 0.00 0.00 31.99 3.67
4164 6570 9.599866 CTGGTTCTACATGAAATAGTAATGTCA 57.400 33.333 0.00 0.00 36.08 3.58
4165 6571 9.601217 ACTGGTTCTACATGAAATAGTAATGTC 57.399 33.333 0.00 0.00 36.08 3.06
4166 6572 9.959721 AACTGGTTCTACATGAAATAGTAATGT 57.040 29.630 0.00 0.00 38.13 2.71
4174 6580 8.947115 GCTAACTAAACTGGTTCTACATGAAAT 58.053 33.333 0.00 0.00 36.30 2.17
4175 6581 7.117236 CGCTAACTAAACTGGTTCTACATGAAA 59.883 37.037 0.00 0.00 36.30 2.69
4176 6582 6.588756 CGCTAACTAAACTGGTTCTACATGAA 59.411 38.462 0.00 0.00 0.00 2.57
4177 6583 6.097356 CGCTAACTAAACTGGTTCTACATGA 58.903 40.000 0.00 0.00 0.00 3.07
4178 6584 5.867716 ACGCTAACTAAACTGGTTCTACATG 59.132 40.000 0.00 0.00 0.00 3.21
4179 6585 6.034161 ACGCTAACTAAACTGGTTCTACAT 57.966 37.500 0.00 0.00 0.00 2.29
4180 6586 5.458041 ACGCTAACTAAACTGGTTCTACA 57.542 39.130 0.00 0.00 0.00 2.74
4181 6587 5.119743 CCAACGCTAACTAAACTGGTTCTAC 59.880 44.000 0.00 0.00 0.00 2.59
4182 6588 5.221501 ACCAACGCTAACTAAACTGGTTCTA 60.222 40.000 0.00 0.00 31.71 2.10
4183 6589 4.062991 CCAACGCTAACTAAACTGGTTCT 58.937 43.478 0.00 0.00 0.00 3.01
4184 6590 3.811497 ACCAACGCTAACTAAACTGGTTC 59.189 43.478 0.00 0.00 31.71 3.62
4185 6591 3.562557 CACCAACGCTAACTAAACTGGTT 59.437 43.478 0.00 0.00 33.46 3.67
4186 6592 3.135994 CACCAACGCTAACTAAACTGGT 58.864 45.455 0.00 0.00 36.12 4.00
4187 6593 3.395639 TCACCAACGCTAACTAAACTGG 58.604 45.455 0.00 0.00 0.00 4.00
4188 6594 4.201589 CGATCACCAACGCTAACTAAACTG 60.202 45.833 0.00 0.00 0.00 3.16
4189 6595 3.924686 CGATCACCAACGCTAACTAAACT 59.075 43.478 0.00 0.00 0.00 2.66
4190 6596 3.676646 ACGATCACCAACGCTAACTAAAC 59.323 43.478 0.00 0.00 0.00 2.01
4191 6597 3.916761 ACGATCACCAACGCTAACTAAA 58.083 40.909 0.00 0.00 0.00 1.85
4192 6598 3.581024 ACGATCACCAACGCTAACTAA 57.419 42.857 0.00 0.00 0.00 2.24
4193 6599 4.700268 TTACGATCACCAACGCTAACTA 57.300 40.909 0.00 0.00 0.00 2.24
4194 6600 3.581024 TTACGATCACCAACGCTAACT 57.419 42.857 0.00 0.00 0.00 2.24
4195 6601 4.852609 AATTACGATCACCAACGCTAAC 57.147 40.909 0.00 0.00 0.00 2.34
4196 6602 4.691685 ACAAATTACGATCACCAACGCTAA 59.308 37.500 0.00 0.00 0.00 3.09
4197 6603 4.247258 ACAAATTACGATCACCAACGCTA 58.753 39.130 0.00 0.00 0.00 4.26
4198 6604 3.071479 ACAAATTACGATCACCAACGCT 58.929 40.909 0.00 0.00 0.00 5.07
4199 6605 3.465122 ACAAATTACGATCACCAACGC 57.535 42.857 0.00 0.00 0.00 4.84
4200 6606 6.160664 AGTAACAAATTACGATCACCAACG 57.839 37.500 0.00 0.00 44.69 4.10
4201 6607 8.166706 CAGTAGTAACAAATTACGATCACCAAC 58.833 37.037 0.00 0.00 44.69 3.77
4202 6608 7.332430 CCAGTAGTAACAAATTACGATCACCAA 59.668 37.037 0.00 0.00 44.69 3.67
4203 6609 6.814644 CCAGTAGTAACAAATTACGATCACCA 59.185 38.462 0.00 0.00 44.69 4.17
4204 6610 7.037438 TCCAGTAGTAACAAATTACGATCACC 58.963 38.462 0.00 0.00 44.69 4.02
4205 6611 8.644318 ATCCAGTAGTAACAAATTACGATCAC 57.356 34.615 0.00 0.00 44.69 3.06
4206 6612 9.661563 AAATCCAGTAGTAACAAATTACGATCA 57.338 29.630 0.00 0.00 44.69 2.92
4210 6616 9.550811 GGAAAAATCCAGTAGTAACAAATTACG 57.449 33.333 0.00 0.00 44.69 3.18
4211 6617 9.850628 GGGAAAAATCCAGTAGTAACAAATTAC 57.149 33.333 0.00 0.00 41.00 1.89
4212 6618 8.732531 CGGGAAAAATCCAGTAGTAACAAATTA 58.267 33.333 0.00 0.00 0.00 1.40
4213 6619 7.309560 CCGGGAAAAATCCAGTAGTAACAAATT 60.310 37.037 0.00 0.00 0.00 1.82
4214 6620 6.152154 CCGGGAAAAATCCAGTAGTAACAAAT 59.848 38.462 0.00 0.00 0.00 2.32
4215 6621 5.474189 CCGGGAAAAATCCAGTAGTAACAAA 59.526 40.000 0.00 0.00 0.00 2.83
4216 6622 5.005094 CCGGGAAAAATCCAGTAGTAACAA 58.995 41.667 0.00 0.00 0.00 2.83
4217 6623 4.286549 TCCGGGAAAAATCCAGTAGTAACA 59.713 41.667 0.00 0.00 0.00 2.41
4218 6624 4.835678 TCCGGGAAAAATCCAGTAGTAAC 58.164 43.478 0.00 0.00 0.00 2.50
4219 6625 4.080751 CCTCCGGGAAAAATCCAGTAGTAA 60.081 45.833 0.00 0.00 33.58 2.24
4220 6626 3.453353 CCTCCGGGAAAAATCCAGTAGTA 59.547 47.826 0.00 0.00 33.58 1.82
4221 6627 2.238898 CCTCCGGGAAAAATCCAGTAGT 59.761 50.000 0.00 0.00 33.58 2.73
4222 6628 2.919228 CCTCCGGGAAAAATCCAGTAG 58.081 52.381 0.00 0.00 33.58 2.57
4224 6630 3.978876 CCTCCGGGAAAAATCCAGT 57.021 52.632 0.00 0.00 33.58 4.00
4236 6642 2.445845 TAGCATGGGTCCCTCCGG 60.446 66.667 10.00 0.00 37.00 5.14
4237 6643 2.511452 CCTAGCATGGGTCCCTCCG 61.511 68.421 10.00 0.00 37.00 4.63
4238 6644 2.823758 GCCTAGCATGGGTCCCTCC 61.824 68.421 10.00 0.00 40.01 4.30
4239 6645 1.635817 TTGCCTAGCATGGGTCCCTC 61.636 60.000 10.00 0.00 40.01 4.30
4240 6646 1.214305 TTTGCCTAGCATGGGTCCCT 61.214 55.000 10.00 0.00 40.01 4.20
4241 6647 0.106015 ATTTGCCTAGCATGGGTCCC 60.106 55.000 0.00 0.00 40.01 4.46
4242 6648 1.322442 GATTTGCCTAGCATGGGTCC 58.678 55.000 0.00 0.00 40.01 4.46
4243 6649 1.678101 GTGATTTGCCTAGCATGGGTC 59.322 52.381 0.00 0.00 40.01 4.46
4244 6650 1.285962 AGTGATTTGCCTAGCATGGGT 59.714 47.619 0.00 0.00 40.01 4.51
4245 6651 2.062971 AGTGATTTGCCTAGCATGGG 57.937 50.000 0.00 0.00 38.76 4.00
4246 6652 2.032550 CGAAGTGATTTGCCTAGCATGG 59.967 50.000 0.00 0.00 38.76 3.66
4247 6653 2.938451 TCGAAGTGATTTGCCTAGCATG 59.062 45.455 0.00 0.00 38.76 4.06
4248 6654 3.201290 CTCGAAGTGATTTGCCTAGCAT 58.799 45.455 0.00 0.00 38.76 3.79
4249 6655 2.028112 ACTCGAAGTGATTTGCCTAGCA 60.028 45.455 0.00 0.00 36.47 3.49
4250 6656 2.605366 GACTCGAAGTGATTTGCCTAGC 59.395 50.000 0.00 0.00 0.00 3.42
4251 6657 3.862267 CAGACTCGAAGTGATTTGCCTAG 59.138 47.826 0.00 0.00 0.00 3.02
4252 6658 3.368427 CCAGACTCGAAGTGATTTGCCTA 60.368 47.826 0.00 0.00 0.00 3.93
4253 6659 2.613977 CCAGACTCGAAGTGATTTGCCT 60.614 50.000 0.00 0.00 0.00 4.75
4254 6660 1.734465 CCAGACTCGAAGTGATTTGCC 59.266 52.381 0.00 0.00 0.00 4.52
4255 6661 2.413453 GACCAGACTCGAAGTGATTTGC 59.587 50.000 0.00 0.00 0.00 3.68
4256 6662 3.653344 TGACCAGACTCGAAGTGATTTG 58.347 45.455 0.00 0.00 0.00 2.32
4257 6663 4.543590 ATGACCAGACTCGAAGTGATTT 57.456 40.909 0.00 0.00 0.00 2.17
4258 6664 5.655488 CTTATGACCAGACTCGAAGTGATT 58.345 41.667 0.00 0.00 0.00 2.57
4259 6665 4.440802 GCTTATGACCAGACTCGAAGTGAT 60.441 45.833 0.00 0.00 0.00 3.06
4260 6666 3.119459 GCTTATGACCAGACTCGAAGTGA 60.119 47.826 0.00 0.00 0.00 3.41
4261 6667 3.182967 GCTTATGACCAGACTCGAAGTG 58.817 50.000 0.00 0.00 0.00 3.16
4262 6668 2.159366 CGCTTATGACCAGACTCGAAGT 60.159 50.000 0.00 0.00 0.00 3.01
4263 6669 2.455032 CGCTTATGACCAGACTCGAAG 58.545 52.381 0.00 0.00 0.00 3.79
4264 6670 1.134367 CCGCTTATGACCAGACTCGAA 59.866 52.381 0.00 0.00 0.00 3.71
4265 6671 0.738975 CCGCTTATGACCAGACTCGA 59.261 55.000 0.00 0.00 0.00 4.04
4266 6672 0.456221 ACCGCTTATGACCAGACTCG 59.544 55.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.