Multiple sequence alignment - TraesCS2B01G623600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G623600 chr2B 100.000 2738 0 0 1 2738 797208401 797211138 0.000000e+00 5057.0
1 TraesCS2B01G623600 chr2B 96.041 2147 54 10 332 2472 797255128 797257249 0.000000e+00 3465.0
2 TraesCS2B01G623600 chr2B 79.536 1207 183 30 541 1739 797183102 797184252 0.000000e+00 802.0
3 TraesCS2B01G623600 chr2B 89.595 173 18 0 1 173 773420586 773420414 1.280000e-53 220.0
4 TraesCS2B01G623600 chr2B 94.805 77 4 0 2381 2457 175521853 175521777 1.330000e-23 121.0
5 TraesCS2B01G623600 chr2B 94.805 77 4 0 2381 2457 244787529 244787605 1.330000e-23 121.0
6 TraesCS2B01G623600 chr2A 88.194 1440 99 19 467 1859 763968744 763967329 0.000000e+00 1652.0
7 TraesCS2B01G623600 chr2A 80.635 1260 169 35 515 1750 763917498 763916290 0.000000e+00 905.0
8 TraesCS2B01G623600 chr2A 79.617 1202 179 36 547 1739 763981469 763980325 0.000000e+00 802.0
9 TraesCS2B01G623600 chr2A 79.326 445 56 22 1860 2285 763967283 763966856 2.080000e-71 279.0
10 TraesCS2B01G623600 chr2A 81.089 349 57 7 537 885 762660016 762660355 1.250000e-68 270.0
11 TraesCS2B01G623600 chr2A 88.506 87 7 2 2655 2738 763939866 763939780 4.820000e-18 102.0
12 TraesCS2B01G623600 chr2D 88.959 1268 111 12 614 1866 638334086 638335339 0.000000e+00 1539.0
13 TraesCS2B01G623600 chr2D 79.421 1210 182 32 541 1739 638318081 638319234 0.000000e+00 793.0
14 TraesCS2B01G623600 chr2D 87.652 494 37 15 1861 2348 638335389 638335864 1.110000e-153 553.0
15 TraesCS2B01G623600 chr2D 74.646 635 118 31 1124 1747 637385460 637384858 9.800000e-60 241.0
16 TraesCS2B01G623600 chr2D 76.050 476 81 23 1119 1588 636946313 636945865 1.650000e-52 217.0
17 TraesCS2B01G623600 chr2D 77.297 370 48 14 511 874 636923292 636922953 4.660000e-43 185.0
18 TraesCS2B01G623600 chr2D 93.506 77 5 0 2381 2457 179350743 179350819 6.200000e-22 115.0
19 TraesCS2B01G623600 chr2D 86.538 52 7 0 1007 1058 637346064 637346013 1.060000e-04 58.4
20 TraesCS2B01G623600 chr4B 75.898 1058 207 36 536 1587 673254004 673252989 5.270000e-137 497.0
21 TraesCS2B01G623600 chr4B 75.064 393 81 12 1351 1736 673334265 673333883 1.690000e-37 167.0
22 TraesCS2B01G623600 chr1B 96.569 204 7 0 1 204 669339352 669339555 3.380000e-89 339.0
23 TraesCS2B01G623600 chr1B 94.872 78 4 0 204 281 57413518 57413595 3.700000e-24 122.0
24 TraesCS2B01G623600 chr7D 76.023 342 49 14 547 885 29984452 29984763 2.200000e-31 147.0
25 TraesCS2B01G623600 chr7D 95.833 72 3 0 211 282 58884193 58884264 1.720000e-22 117.0
26 TraesCS2B01G623600 chr7D 93.506 77 5 0 2381 2457 225183195 225183119 6.200000e-22 115.0
27 TraesCS2B01G623600 chr7A 81.768 181 27 4 1433 1607 439730725 439730905 2.200000e-31 147.0
28 TraesCS2B01G623600 chr1D 96.203 79 3 0 204 282 486298960 486299038 2.210000e-26 130.0
29 TraesCS2B01G623600 chr1D 90.909 77 7 0 2381 2457 62706388 62706312 1.340000e-18 104.0
30 TraesCS2B01G623600 chr4A 88.073 109 11 2 1753 1859 236227952 236228060 7.960000e-26 128.0
31 TraesCS2B01G623600 chr4A 93.506 77 5 0 204 280 36286161 36286085 6.200000e-22 115.0
32 TraesCS2B01G623600 chr4A 93.506 77 5 0 2381 2457 731574322 731574246 6.200000e-22 115.0
33 TraesCS2B01G623600 chr4A 89.610 77 8 0 547 623 699192660 699192584 6.240000e-17 99.0
34 TraesCS2B01G623600 chr1A 96.104 77 3 0 2381 2457 525186651 525186575 2.860000e-25 126.0
35 TraesCS2B01G623600 chr7B 94.805 77 4 0 2381 2457 648142454 648142378 1.330000e-23 121.0
36 TraesCS2B01G623600 chr6A 93.671 79 5 0 204 282 7198256 7198334 4.790000e-23 119.0
37 TraesCS2B01G623600 chr6A 92.405 79 6 0 204 282 616707963 616707885 2.230000e-21 113.0
38 TraesCS2B01G623600 chr5A 93.671 79 5 0 204 282 30087650 30087728 4.790000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G623600 chr2B 797208401 797211138 2737 False 5057.0 5057 100.0000 1 2738 1 chr2B.!!$F3 2737
1 TraesCS2B01G623600 chr2B 797255128 797257249 2121 False 3465.0 3465 96.0410 332 2472 1 chr2B.!!$F4 2140
2 TraesCS2B01G623600 chr2B 797183102 797184252 1150 False 802.0 802 79.5360 541 1739 1 chr2B.!!$F2 1198
3 TraesCS2B01G623600 chr2A 763966856 763968744 1888 True 965.5 1652 83.7600 467 2285 2 chr2A.!!$R4 1818
4 TraesCS2B01G623600 chr2A 763916290 763917498 1208 True 905.0 905 80.6350 515 1750 1 chr2A.!!$R1 1235
5 TraesCS2B01G623600 chr2A 763980325 763981469 1144 True 802.0 802 79.6170 547 1739 1 chr2A.!!$R3 1192
6 TraesCS2B01G623600 chr2D 638334086 638335864 1778 False 1046.0 1539 88.3055 614 2348 2 chr2D.!!$F3 1734
7 TraesCS2B01G623600 chr2D 638318081 638319234 1153 False 793.0 793 79.4210 541 1739 1 chr2D.!!$F2 1198
8 TraesCS2B01G623600 chr2D 637384858 637385460 602 True 241.0 241 74.6460 1124 1747 1 chr2D.!!$R4 623
9 TraesCS2B01G623600 chr4B 673252989 673254004 1015 True 497.0 497 75.8980 536 1587 1 chr4B.!!$R1 1051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
253 254 0.036732 AAAGCCTCCGTGAGCAATGA 59.963 50.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 2213 1.017387 GCATACACTGCCTTACTGCC 58.983 55.0 0.0 0.0 45.66 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.729862 TTTTTGTCTCACATGCATGCA 57.270 38.095 26.53 25.04 0.00 3.96
21 22 3.945981 TTTTGTCTCACATGCATGCAT 57.054 38.095 27.46 27.46 37.08 3.96
22 23 3.945981 TTTGTCTCACATGCATGCATT 57.054 38.095 30.32 18.23 33.90 3.56
23 24 3.497297 TTGTCTCACATGCATGCATTC 57.503 42.857 30.32 15.68 33.90 2.67
24 25 2.438411 TGTCTCACATGCATGCATTCA 58.562 42.857 30.32 17.76 33.90 2.57
25 26 2.162809 TGTCTCACATGCATGCATTCAC 59.837 45.455 30.32 20.15 33.90 3.18
26 27 2.162809 GTCTCACATGCATGCATTCACA 59.837 45.455 30.32 13.40 33.90 3.58
27 28 2.162809 TCTCACATGCATGCATTCACAC 59.837 45.455 30.32 0.00 33.90 3.82
28 29 2.163613 CTCACATGCATGCATTCACACT 59.836 45.455 30.32 6.12 33.90 3.55
29 30 2.559231 TCACATGCATGCATTCACACTT 59.441 40.909 30.32 5.27 33.90 3.16
30 31 3.757493 TCACATGCATGCATTCACACTTA 59.243 39.130 30.32 7.65 33.90 2.24
31 32 4.217983 TCACATGCATGCATTCACACTTAA 59.782 37.500 30.32 6.12 33.90 1.85
32 33 4.924462 CACATGCATGCATTCACACTTAAA 59.076 37.500 30.32 0.00 33.90 1.52
33 34 5.579119 CACATGCATGCATTCACACTTAAAT 59.421 36.000 30.32 2.79 33.90 1.40
34 35 5.808540 ACATGCATGCATTCACACTTAAATC 59.191 36.000 30.32 0.00 33.90 2.17
35 36 5.388408 TGCATGCATTCACACTTAAATCA 57.612 34.783 18.46 0.00 0.00 2.57
36 37 5.780984 TGCATGCATTCACACTTAAATCAA 58.219 33.333 18.46 0.00 0.00 2.57
37 38 6.399743 TGCATGCATTCACACTTAAATCAAT 58.600 32.000 18.46 0.00 0.00 2.57
38 39 6.874664 TGCATGCATTCACACTTAAATCAATT 59.125 30.769 18.46 0.00 0.00 2.32
39 40 7.148557 TGCATGCATTCACACTTAAATCAATTG 60.149 33.333 18.46 0.00 0.00 2.32
40 41 7.675403 GCATGCATTCACACTTAAATCAATTGG 60.675 37.037 14.21 0.00 0.00 3.16
41 42 6.990798 TGCATTCACACTTAAATCAATTGGA 58.009 32.000 5.42 0.00 0.00 3.53
42 43 6.867816 TGCATTCACACTTAAATCAATTGGAC 59.132 34.615 5.42 0.00 0.00 4.02
43 44 6.867816 GCATTCACACTTAAATCAATTGGACA 59.132 34.615 5.42 0.00 0.00 4.02
44 45 7.148755 GCATTCACACTTAAATCAATTGGACAC 60.149 37.037 5.42 0.00 0.00 3.67
45 46 5.996219 TCACACTTAAATCAATTGGACACG 58.004 37.500 5.42 0.00 0.00 4.49
46 47 5.049060 TCACACTTAAATCAATTGGACACGG 60.049 40.000 5.42 0.00 0.00 4.94
47 48 5.049060 CACACTTAAATCAATTGGACACGGA 60.049 40.000 5.42 0.00 0.00 4.69
48 49 5.710099 ACACTTAAATCAATTGGACACGGAT 59.290 36.000 5.42 0.00 0.00 4.18
49 50 6.029607 CACTTAAATCAATTGGACACGGATG 58.970 40.000 5.42 0.00 0.00 3.51
50 51 3.508744 AAATCAATTGGACACGGATGC 57.491 42.857 5.42 0.00 0.00 3.91
51 52 2.425143 ATCAATTGGACACGGATGCT 57.575 45.000 5.42 0.00 0.00 3.79
52 53 2.198827 TCAATTGGACACGGATGCTT 57.801 45.000 5.42 0.00 0.00 3.91
53 54 2.083774 TCAATTGGACACGGATGCTTC 58.916 47.619 5.42 0.00 0.00 3.86
54 55 1.133025 CAATTGGACACGGATGCTTCC 59.867 52.381 8.60 8.60 38.81 3.46
55 56 0.620556 ATTGGACACGGATGCTTCCT 59.379 50.000 16.03 0.00 40.17 3.36
56 57 0.321564 TTGGACACGGATGCTTCCTG 60.322 55.000 16.03 14.37 40.17 3.86
57 58 2.109126 GGACACGGATGCTTCCTGC 61.109 63.158 16.03 9.31 40.17 4.85
75 76 3.944871 CACACTTTGCTCCGCTTTT 57.055 47.368 0.00 0.00 0.00 2.27
76 77 2.208326 CACACTTTGCTCCGCTTTTT 57.792 45.000 0.00 0.00 0.00 1.94
77 78 2.119457 CACACTTTGCTCCGCTTTTTC 58.881 47.619 0.00 0.00 0.00 2.29
78 79 1.067060 ACACTTTGCTCCGCTTTTTCC 59.933 47.619 0.00 0.00 0.00 3.13
79 80 1.338020 CACTTTGCTCCGCTTTTTCCT 59.662 47.619 0.00 0.00 0.00 3.36
80 81 1.609072 ACTTTGCTCCGCTTTTTCCTC 59.391 47.619 0.00 0.00 0.00 3.71
81 82 1.608590 CTTTGCTCCGCTTTTTCCTCA 59.391 47.619 0.00 0.00 0.00 3.86
82 83 1.238439 TTGCTCCGCTTTTTCCTCAG 58.762 50.000 0.00 0.00 0.00 3.35
83 84 1.237285 TGCTCCGCTTTTTCCTCAGC 61.237 55.000 0.00 0.00 0.00 4.26
84 85 1.237285 GCTCCGCTTTTTCCTCAGCA 61.237 55.000 0.00 0.00 35.60 4.41
85 86 0.519077 CTCCGCTTTTTCCTCAGCAC 59.481 55.000 0.00 0.00 35.60 4.40
86 87 0.179032 TCCGCTTTTTCCTCAGCACA 60.179 50.000 0.00 0.00 35.60 4.57
87 88 0.040067 CCGCTTTTTCCTCAGCACAC 60.040 55.000 0.00 0.00 35.60 3.82
88 89 0.040067 CGCTTTTTCCTCAGCACACC 60.040 55.000 0.00 0.00 35.60 4.16
89 90 0.040067 GCTTTTTCCTCAGCACACCG 60.040 55.000 0.00 0.00 35.95 4.94
90 91 0.040067 CTTTTTCCTCAGCACACCGC 60.040 55.000 0.00 0.00 42.91 5.68
91 92 0.749818 TTTTTCCTCAGCACACCGCA 60.750 50.000 0.00 0.00 46.13 5.69
92 93 0.749818 TTTTCCTCAGCACACCGCAA 60.750 50.000 0.00 0.00 46.13 4.85
93 94 0.537143 TTTCCTCAGCACACCGCAAT 60.537 50.000 0.00 0.00 46.13 3.56
94 95 0.955428 TTCCTCAGCACACCGCAATC 60.955 55.000 0.00 0.00 46.13 2.67
95 96 1.376424 CCTCAGCACACCGCAATCT 60.376 57.895 0.00 0.00 46.13 2.40
96 97 0.957395 CCTCAGCACACCGCAATCTT 60.957 55.000 0.00 0.00 46.13 2.40
97 98 0.167470 CTCAGCACACCGCAATCTTG 59.833 55.000 0.00 0.00 46.13 3.02
117 118 1.527034 CAGCATGCACAACCACTAGT 58.473 50.000 21.98 0.00 0.00 2.57
118 119 1.881973 CAGCATGCACAACCACTAGTT 59.118 47.619 21.98 0.00 40.16 2.24
119 120 2.095567 CAGCATGCACAACCACTAGTTC 60.096 50.000 21.98 0.00 36.18 3.01
120 121 2.154462 GCATGCACAACCACTAGTTCT 58.846 47.619 14.21 0.00 36.18 3.01
121 122 2.095567 GCATGCACAACCACTAGTTCTG 60.096 50.000 14.21 0.00 36.18 3.02
122 123 1.593196 TGCACAACCACTAGTTCTGC 58.407 50.000 0.00 0.00 46.97 4.26
123 124 1.140852 TGCACAACCACTAGTTCTGCT 59.859 47.619 7.21 0.00 46.92 4.24
124 125 2.367241 TGCACAACCACTAGTTCTGCTA 59.633 45.455 7.21 0.00 46.92 3.49
125 126 2.996621 GCACAACCACTAGTTCTGCTAG 59.003 50.000 0.00 0.00 44.37 3.42
132 133 2.483583 CTAGTTCTGCTAGTCGCTGG 57.516 55.000 0.00 0.00 41.68 4.85
133 134 1.746220 CTAGTTCTGCTAGTCGCTGGT 59.254 52.381 0.00 0.00 41.68 4.00
134 135 0.528470 AGTTCTGCTAGTCGCTGGTC 59.472 55.000 0.00 0.00 40.11 4.02
135 136 0.458716 GTTCTGCTAGTCGCTGGTCC 60.459 60.000 0.00 0.00 40.11 4.46
136 137 0.612174 TTCTGCTAGTCGCTGGTCCT 60.612 55.000 0.00 0.00 40.11 3.85
137 138 0.612174 TCTGCTAGTCGCTGGTCCTT 60.612 55.000 0.00 0.00 40.11 3.36
138 139 0.247736 CTGCTAGTCGCTGGTCCTTT 59.752 55.000 0.00 0.00 40.11 3.11
139 140 0.037326 TGCTAGTCGCTGGTCCTTTG 60.037 55.000 0.00 0.00 40.11 2.77
140 141 0.246635 GCTAGTCGCTGGTCCTTTGA 59.753 55.000 0.00 0.00 35.14 2.69
141 142 1.134670 GCTAGTCGCTGGTCCTTTGAT 60.135 52.381 0.00 0.00 35.14 2.57
142 143 2.678190 GCTAGTCGCTGGTCCTTTGATT 60.678 50.000 0.00 0.00 35.14 2.57
143 144 2.100605 AGTCGCTGGTCCTTTGATTC 57.899 50.000 0.00 0.00 0.00 2.52
144 145 1.625818 AGTCGCTGGTCCTTTGATTCT 59.374 47.619 0.00 0.00 0.00 2.40
145 146 1.734465 GTCGCTGGTCCTTTGATTCTG 59.266 52.381 0.00 0.00 0.00 3.02
146 147 1.347707 TCGCTGGTCCTTTGATTCTGT 59.652 47.619 0.00 0.00 0.00 3.41
147 148 2.154462 CGCTGGTCCTTTGATTCTGTT 58.846 47.619 0.00 0.00 0.00 3.16
148 149 2.554032 CGCTGGTCCTTTGATTCTGTTT 59.446 45.455 0.00 0.00 0.00 2.83
149 150 3.610114 CGCTGGTCCTTTGATTCTGTTTG 60.610 47.826 0.00 0.00 0.00 2.93
150 151 3.858503 GCTGGTCCTTTGATTCTGTTTGC 60.859 47.826 0.00 0.00 0.00 3.68
151 152 3.295093 TGGTCCTTTGATTCTGTTTGCA 58.705 40.909 0.00 0.00 0.00 4.08
152 153 3.068024 TGGTCCTTTGATTCTGTTTGCAC 59.932 43.478 0.00 0.00 0.00 4.57
153 154 3.319122 GGTCCTTTGATTCTGTTTGCACT 59.681 43.478 0.00 0.00 0.00 4.40
154 155 4.540824 GTCCTTTGATTCTGTTTGCACTC 58.459 43.478 0.00 0.00 0.00 3.51
155 156 3.250762 TCCTTTGATTCTGTTTGCACTCG 59.749 43.478 0.00 0.00 0.00 4.18
156 157 3.003689 CCTTTGATTCTGTTTGCACTCGT 59.996 43.478 0.00 0.00 0.00 4.18
157 158 3.878086 TTGATTCTGTTTGCACTCGTC 57.122 42.857 0.00 0.00 0.00 4.20
158 159 2.143122 TGATTCTGTTTGCACTCGTCC 58.857 47.619 0.00 0.00 0.00 4.79
159 160 1.126846 GATTCTGTTTGCACTCGTCCG 59.873 52.381 0.00 0.00 0.00 4.79
160 161 0.878523 TTCTGTTTGCACTCGTCCGG 60.879 55.000 0.00 0.00 0.00 5.14
161 162 1.300620 CTGTTTGCACTCGTCCGGA 60.301 57.895 0.00 0.00 0.00 5.14
162 163 0.670546 CTGTTTGCACTCGTCCGGAT 60.671 55.000 7.81 0.00 0.00 4.18
163 164 0.669318 TGTTTGCACTCGTCCGGATC 60.669 55.000 7.81 0.00 0.00 3.36
164 165 0.389948 GTTTGCACTCGTCCGGATCT 60.390 55.000 7.81 0.00 0.00 2.75
165 166 0.389817 TTTGCACTCGTCCGGATCTG 60.390 55.000 7.81 2.92 0.00 2.90
166 167 1.532604 TTGCACTCGTCCGGATCTGT 61.533 55.000 7.81 3.65 0.00 3.41
167 168 1.215647 GCACTCGTCCGGATCTGTT 59.784 57.895 7.81 0.00 0.00 3.16
168 169 0.802607 GCACTCGTCCGGATCTGTTC 60.803 60.000 7.81 0.00 0.00 3.18
169 170 0.179134 CACTCGTCCGGATCTGTTCC 60.179 60.000 7.81 0.00 41.59 3.62
170 171 0.323542 ACTCGTCCGGATCTGTTCCT 60.324 55.000 7.81 0.00 42.99 3.36
171 172 1.064906 ACTCGTCCGGATCTGTTCCTA 60.065 52.381 7.81 0.00 42.99 2.94
172 173 2.022195 CTCGTCCGGATCTGTTCCTAA 58.978 52.381 7.81 0.00 42.99 2.69
173 174 2.426024 CTCGTCCGGATCTGTTCCTAAA 59.574 50.000 7.81 0.00 42.99 1.85
174 175 2.827322 TCGTCCGGATCTGTTCCTAAAA 59.173 45.455 7.81 0.00 42.99 1.52
175 176 3.449737 TCGTCCGGATCTGTTCCTAAAAT 59.550 43.478 7.81 0.00 42.99 1.82
176 177 3.802685 CGTCCGGATCTGTTCCTAAAATC 59.197 47.826 7.81 0.00 42.99 2.17
177 178 4.127907 GTCCGGATCTGTTCCTAAAATCC 58.872 47.826 7.81 0.00 42.99 3.01
181 182 4.127907 GGATCTGTTCCTAAAATCCGACC 58.872 47.826 0.00 0.00 41.78 4.79
182 183 3.241067 TCTGTTCCTAAAATCCGACCG 57.759 47.619 0.00 0.00 0.00 4.79
183 184 2.564062 TCTGTTCCTAAAATCCGACCGT 59.436 45.455 0.00 0.00 0.00 4.83
184 185 3.763360 TCTGTTCCTAAAATCCGACCGTA 59.237 43.478 0.00 0.00 0.00 4.02
185 186 4.403432 TCTGTTCCTAAAATCCGACCGTAT 59.597 41.667 0.00 0.00 0.00 3.06
186 187 4.435425 TGTTCCTAAAATCCGACCGTATG 58.565 43.478 0.00 0.00 0.00 2.39
187 188 3.738830 TCCTAAAATCCGACCGTATGG 57.261 47.619 0.00 0.00 42.84 2.74
188 189 3.298619 TCCTAAAATCCGACCGTATGGA 58.701 45.455 8.33 0.00 39.21 3.41
189 190 3.068590 TCCTAAAATCCGACCGTATGGAC 59.931 47.826 8.33 0.00 37.02 4.02
198 199 4.270392 CGTATGGACGTTGGCACA 57.730 55.556 0.00 0.00 44.31 4.57
199 200 1.785321 CGTATGGACGTTGGCACAC 59.215 57.895 0.00 0.00 44.31 3.82
200 201 0.669318 CGTATGGACGTTGGCACACT 60.669 55.000 0.00 0.00 44.31 3.55
201 202 1.076332 GTATGGACGTTGGCACACTC 58.924 55.000 0.00 0.00 39.29 3.51
202 203 0.036765 TATGGACGTTGGCACACTCC 60.037 55.000 0.00 0.00 39.29 3.85
203 204 1.768684 ATGGACGTTGGCACACTCCT 61.769 55.000 0.00 0.00 39.29 3.69
204 205 1.116536 TGGACGTTGGCACACTCCTA 61.117 55.000 0.00 0.00 39.29 2.94
205 206 0.389948 GGACGTTGGCACACTCCTAG 60.390 60.000 0.00 0.00 39.29 3.02
206 207 0.601558 GACGTTGGCACACTCCTAGA 59.398 55.000 0.00 0.00 39.29 2.43
207 208 1.204941 GACGTTGGCACACTCCTAGAT 59.795 52.381 0.00 0.00 39.29 1.98
208 209 1.623811 ACGTTGGCACACTCCTAGATT 59.376 47.619 0.00 0.00 39.29 2.40
209 210 2.038557 ACGTTGGCACACTCCTAGATTT 59.961 45.455 0.00 0.00 39.29 2.17
210 211 3.074412 CGTTGGCACACTCCTAGATTTT 58.926 45.455 0.00 0.00 39.29 1.82
211 212 4.250464 CGTTGGCACACTCCTAGATTTTA 58.750 43.478 0.00 0.00 39.29 1.52
212 213 4.876107 CGTTGGCACACTCCTAGATTTTAT 59.124 41.667 0.00 0.00 39.29 1.40
213 214 5.354234 CGTTGGCACACTCCTAGATTTTATT 59.646 40.000 0.00 0.00 39.29 1.40
214 215 6.555315 GTTGGCACACTCCTAGATTTTATTG 58.445 40.000 0.00 0.00 39.29 1.90
215 216 5.815581 TGGCACACTCCTAGATTTTATTGT 58.184 37.500 0.00 0.00 0.00 2.71
216 217 6.953101 TGGCACACTCCTAGATTTTATTGTA 58.047 36.000 0.00 0.00 0.00 2.41
217 218 7.398829 TGGCACACTCCTAGATTTTATTGTAA 58.601 34.615 0.00 0.00 0.00 2.41
218 219 7.885922 TGGCACACTCCTAGATTTTATTGTAAA 59.114 33.333 0.00 0.00 0.00 2.01
219 220 8.182227 GGCACACTCCTAGATTTTATTGTAAAC 58.818 37.037 0.00 0.00 0.00 2.01
220 221 8.947115 GCACACTCCTAGATTTTATTGTAAACT 58.053 33.333 0.00 0.00 0.00 2.66
224 225 8.957466 ACTCCTAGATTTTATTGTAAACTTGGC 58.043 33.333 0.00 0.00 0.00 4.52
225 226 9.178758 CTCCTAGATTTTATTGTAAACTTGGCT 57.821 33.333 0.00 0.00 0.00 4.75
226 227 9.174166 TCCTAGATTTTATTGTAAACTTGGCTC 57.826 33.333 0.00 0.00 0.00 4.70
227 228 9.178758 CCTAGATTTTATTGTAAACTTGGCTCT 57.821 33.333 0.00 0.00 0.00 4.09
228 229 9.994432 CTAGATTTTATTGTAAACTTGGCTCTG 57.006 33.333 0.00 0.00 0.00 3.35
229 230 7.830739 AGATTTTATTGTAAACTTGGCTCTGG 58.169 34.615 0.00 0.00 0.00 3.86
230 231 5.385509 TTTATTGTAAACTTGGCTCTGGC 57.614 39.130 0.00 0.00 37.82 4.85
231 232 2.656947 TTGTAAACTTGGCTCTGGCT 57.343 45.000 0.00 0.00 38.73 4.75
232 233 1.896220 TGTAAACTTGGCTCTGGCTG 58.104 50.000 0.00 0.00 38.73 4.85
233 234 1.419762 TGTAAACTTGGCTCTGGCTGA 59.580 47.619 0.00 0.00 38.73 4.26
234 235 2.158682 TGTAAACTTGGCTCTGGCTGAA 60.159 45.455 0.00 0.00 38.73 3.02
235 236 2.071778 AAACTTGGCTCTGGCTGAAA 57.928 45.000 0.00 0.00 38.73 2.69
236 237 2.071778 AACTTGGCTCTGGCTGAAAA 57.928 45.000 0.00 0.00 38.73 2.29
237 238 1.613836 ACTTGGCTCTGGCTGAAAAG 58.386 50.000 0.00 3.16 38.73 2.27
238 239 0.243095 CTTGGCTCTGGCTGAAAAGC 59.757 55.000 0.00 0.00 38.73 3.51
246 247 4.379174 GCTGAAAAGCCTCCGTGA 57.621 55.556 0.00 0.00 0.00 4.35
247 248 2.166270 GCTGAAAAGCCTCCGTGAG 58.834 57.895 0.00 0.00 0.00 3.51
248 249 1.916697 GCTGAAAAGCCTCCGTGAGC 61.917 60.000 0.00 0.00 0.00 4.26
249 250 0.603707 CTGAAAAGCCTCCGTGAGCA 60.604 55.000 0.00 0.00 0.00 4.26
250 251 0.179032 TGAAAAGCCTCCGTGAGCAA 60.179 50.000 0.00 0.00 0.00 3.91
251 252 1.168714 GAAAAGCCTCCGTGAGCAAT 58.831 50.000 0.00 0.00 0.00 3.56
252 253 0.883833 AAAAGCCTCCGTGAGCAATG 59.116 50.000 0.00 0.00 0.00 2.82
253 254 0.036732 AAAGCCTCCGTGAGCAATGA 59.963 50.000 0.00 0.00 0.00 2.57
254 255 0.392193 AAGCCTCCGTGAGCAATGAG 60.392 55.000 0.00 0.00 0.00 2.90
255 256 1.219124 GCCTCCGTGAGCAATGAGA 59.781 57.895 0.00 0.00 0.00 3.27
256 257 0.391661 GCCTCCGTGAGCAATGAGAA 60.392 55.000 0.00 0.00 0.00 2.87
257 258 1.745141 GCCTCCGTGAGCAATGAGAAT 60.745 52.381 0.00 0.00 0.00 2.40
258 259 2.208431 CCTCCGTGAGCAATGAGAATC 58.792 52.381 0.00 0.00 0.00 2.52
259 260 2.208431 CTCCGTGAGCAATGAGAATCC 58.792 52.381 0.00 0.00 0.00 3.01
260 261 1.134401 TCCGTGAGCAATGAGAATCCC 60.134 52.381 0.00 0.00 0.00 3.85
261 262 1.303309 CGTGAGCAATGAGAATCCCC 58.697 55.000 0.00 0.00 0.00 4.81
262 263 1.134280 CGTGAGCAATGAGAATCCCCT 60.134 52.381 0.00 0.00 0.00 4.79
263 264 2.681976 CGTGAGCAATGAGAATCCCCTT 60.682 50.000 0.00 0.00 0.00 3.95
264 265 3.359950 GTGAGCAATGAGAATCCCCTTT 58.640 45.455 0.00 0.00 0.00 3.11
265 266 3.766051 GTGAGCAATGAGAATCCCCTTTT 59.234 43.478 0.00 0.00 0.00 2.27
266 267 4.019174 TGAGCAATGAGAATCCCCTTTTC 58.981 43.478 0.00 0.00 0.00 2.29
267 268 4.019174 GAGCAATGAGAATCCCCTTTTCA 58.981 43.478 0.00 0.00 32.98 2.69
268 269 3.766051 AGCAATGAGAATCCCCTTTTCAC 59.234 43.478 0.00 0.00 31.39 3.18
269 270 3.118992 GCAATGAGAATCCCCTTTTCACC 60.119 47.826 0.00 0.00 31.39 4.02
270 271 2.899303 TGAGAATCCCCTTTTCACCC 57.101 50.000 0.00 0.00 0.00 4.61
271 272 1.004277 TGAGAATCCCCTTTTCACCCG 59.996 52.381 0.00 0.00 0.00 5.28
272 273 1.004394 GAGAATCCCCTTTTCACCCGT 59.996 52.381 0.00 0.00 0.00 5.28
273 274 2.237893 GAGAATCCCCTTTTCACCCGTA 59.762 50.000 0.00 0.00 0.00 4.02
274 275 2.645797 AGAATCCCCTTTTCACCCGTAA 59.354 45.455 0.00 0.00 0.00 3.18
275 276 3.074836 AGAATCCCCTTTTCACCCGTAAA 59.925 43.478 0.00 0.00 0.00 2.01
276 277 3.529216 ATCCCCTTTTCACCCGTAAAA 57.471 42.857 0.00 0.00 0.00 1.52
277 278 3.309600 TCCCCTTTTCACCCGTAAAAA 57.690 42.857 0.00 0.00 0.00 1.94
306 307 2.692709 TTTTTCTGGATGCTGGGGAA 57.307 45.000 0.00 0.00 0.00 3.97
307 308 2.692709 TTTTCTGGATGCTGGGGAAA 57.307 45.000 0.00 0.00 0.00 3.13
308 309 2.925966 TTTCTGGATGCTGGGGAAAT 57.074 45.000 0.00 0.00 0.00 2.17
309 310 2.442236 TTCTGGATGCTGGGGAAATC 57.558 50.000 0.00 0.00 0.00 2.17
310 311 1.600058 TCTGGATGCTGGGGAAATCT 58.400 50.000 0.00 0.00 0.00 2.40
311 312 1.925255 TCTGGATGCTGGGGAAATCTT 59.075 47.619 0.00 0.00 0.00 2.40
312 313 2.312741 TCTGGATGCTGGGGAAATCTTT 59.687 45.455 0.00 0.00 0.00 2.52
313 314 3.527253 TCTGGATGCTGGGGAAATCTTTA 59.473 43.478 0.00 0.00 0.00 1.85
314 315 4.017591 TCTGGATGCTGGGGAAATCTTTAA 60.018 41.667 0.00 0.00 0.00 1.52
315 316 4.682563 TGGATGCTGGGGAAATCTTTAAA 58.317 39.130 0.00 0.00 0.00 1.52
316 317 5.090139 TGGATGCTGGGGAAATCTTTAAAA 58.910 37.500 0.00 0.00 0.00 1.52
317 318 5.545723 TGGATGCTGGGGAAATCTTTAAAAA 59.454 36.000 0.00 0.00 0.00 1.94
379 380 3.439129 GGTGAAAATCTTAGTGGGAACGG 59.561 47.826 0.00 0.00 0.00 4.44
393 394 2.171870 GGGAACGGAGGGATTTGTCATA 59.828 50.000 0.00 0.00 0.00 2.15
1266 1323 3.294493 AATGCTGGCGGCGTGTTT 61.294 55.556 14.91 1.71 45.43 2.83
1349 1425 1.001633 CCGCAAGTACCTTGTAGTGGT 59.998 52.381 5.92 0.00 42.77 4.16
1665 1768 1.977544 CCTCGAGGTCGGTTGGACT 60.978 63.158 24.04 0.00 45.35 3.85
1781 1888 9.646427 GATAAGAGTAATTGATAGCCTAGGTTG 57.354 37.037 11.31 0.00 0.00 3.77
1814 1922 5.748630 CAGTAAAGAAAAAGGCTTGACAACC 59.251 40.000 0.00 0.00 30.51 3.77
1994 2167 6.012745 AGCCTGGTTTCTAGATTGTTTCAAT 58.987 36.000 0.00 0.00 0.00 2.57
2037 2210 0.391395 CAGTGCAGCAGAGCTTAGCT 60.391 55.000 6.37 6.37 43.88 3.32
2038 2211 1.134877 CAGTGCAGCAGAGCTTAGCTA 60.135 52.381 6.75 0.00 39.88 3.32
2039 2212 1.552337 AGTGCAGCAGAGCTTAGCTAA 59.448 47.619 6.75 5.94 39.88 3.09
2040 2213 1.932511 GTGCAGCAGAGCTTAGCTAAG 59.067 52.381 26.20 26.20 39.88 2.18
2041 2214 1.134580 TGCAGCAGAGCTTAGCTAAGG 60.135 52.381 29.93 16.87 39.88 2.69
2042 2215 1.580815 CAGCAGAGCTTAGCTAAGGC 58.419 55.000 29.93 24.15 39.88 4.35
2043 2216 1.134580 CAGCAGAGCTTAGCTAAGGCA 60.135 52.381 29.93 0.00 39.88 4.75
2044 2217 1.138661 AGCAGAGCTTAGCTAAGGCAG 59.861 52.381 29.93 17.57 39.88 4.85
2082 2278 4.006780 TGTGCTTAGCTGATGACTTGAA 57.993 40.909 5.60 0.00 0.00 2.69
2096 2292 1.699634 ACTTGAAAGCCTCACAGCCTA 59.300 47.619 0.00 0.00 32.21 3.93
2115 2311 5.916969 GCCTATGCTTACTTAATTACTGCG 58.083 41.667 0.00 0.00 33.53 5.18
2472 2673 0.323360 GCCTATTGTGTCCCTGCCAA 60.323 55.000 0.00 0.00 0.00 4.52
2473 2674 1.755179 CCTATTGTGTCCCTGCCAAG 58.245 55.000 0.00 0.00 0.00 3.61
2474 2675 1.004745 CCTATTGTGTCCCTGCCAAGT 59.995 52.381 0.00 0.00 0.00 3.16
2475 2676 2.086869 CTATTGTGTCCCTGCCAAGTG 58.913 52.381 0.00 0.00 0.00 3.16
2476 2677 0.478072 ATTGTGTCCCTGCCAAGTGA 59.522 50.000 0.00 0.00 0.00 3.41
2477 2678 0.257328 TTGTGTCCCTGCCAAGTGAA 59.743 50.000 0.00 0.00 0.00 3.18
2478 2679 0.257328 TGTGTCCCTGCCAAGTGAAA 59.743 50.000 0.00 0.00 0.00 2.69
2479 2680 0.954452 GTGTCCCTGCCAAGTGAAAG 59.046 55.000 0.00 0.00 0.00 2.62
2480 2681 0.178992 TGTCCCTGCCAAGTGAAAGG 60.179 55.000 0.00 0.00 0.00 3.11
2489 2690 2.856222 CCAAGTGAAAGGCTTGAGAGT 58.144 47.619 0.00 0.00 44.29 3.24
2490 2691 3.217626 CCAAGTGAAAGGCTTGAGAGTT 58.782 45.455 0.00 0.00 44.29 3.01
2491 2692 3.633986 CCAAGTGAAAGGCTTGAGAGTTT 59.366 43.478 0.00 0.00 44.29 2.66
2492 2693 4.098501 CCAAGTGAAAGGCTTGAGAGTTTT 59.901 41.667 0.00 0.00 44.29 2.43
2493 2694 5.277047 CAAGTGAAAGGCTTGAGAGTTTTC 58.723 41.667 0.00 0.00 44.29 2.29
2494 2695 3.885901 AGTGAAAGGCTTGAGAGTTTTCC 59.114 43.478 0.00 0.00 32.45 3.13
2495 2696 3.885901 GTGAAAGGCTTGAGAGTTTTCCT 59.114 43.478 0.00 0.00 32.45 3.36
2496 2697 4.339530 GTGAAAGGCTTGAGAGTTTTCCTT 59.660 41.667 0.00 0.00 35.63 3.36
2497 2698 5.531287 GTGAAAGGCTTGAGAGTTTTCCTTA 59.469 40.000 0.00 0.00 33.91 2.69
2498 2699 6.207614 GTGAAAGGCTTGAGAGTTTTCCTTAT 59.792 38.462 0.00 0.00 33.91 1.73
2499 2700 6.431234 TGAAAGGCTTGAGAGTTTTCCTTATC 59.569 38.462 0.00 0.00 33.91 1.75
2500 2701 5.770685 AGGCTTGAGAGTTTTCCTTATCT 57.229 39.130 0.00 0.00 0.00 1.98
2501 2702 5.495640 AGGCTTGAGAGTTTTCCTTATCTG 58.504 41.667 0.00 0.00 0.00 2.90
2502 2703 5.249393 AGGCTTGAGAGTTTTCCTTATCTGA 59.751 40.000 0.00 0.00 0.00 3.27
2503 2704 5.940470 GGCTTGAGAGTTTTCCTTATCTGAA 59.060 40.000 0.00 0.00 0.00 3.02
2504 2705 6.431234 GGCTTGAGAGTTTTCCTTATCTGAAA 59.569 38.462 0.00 0.00 0.00 2.69
2505 2706 7.361628 GGCTTGAGAGTTTTCCTTATCTGAAAG 60.362 40.741 0.00 0.00 33.58 2.62
2519 2720 4.090761 TCTGAAAGATCTGGTGCTTTGT 57.909 40.909 0.00 0.00 38.67 2.83
2520 2721 3.817084 TCTGAAAGATCTGGTGCTTTGTG 59.183 43.478 0.00 0.00 38.67 3.33
2521 2722 2.886523 TGAAAGATCTGGTGCTTTGTGG 59.113 45.455 0.00 0.00 34.69 4.17
2522 2723 1.915141 AAGATCTGGTGCTTTGTGGG 58.085 50.000 0.00 0.00 0.00 4.61
2523 2724 0.773644 AGATCTGGTGCTTTGTGGGT 59.226 50.000 0.00 0.00 0.00 4.51
2524 2725 0.883833 GATCTGGTGCTTTGTGGGTG 59.116 55.000 0.00 0.00 0.00 4.61
2525 2726 1.181098 ATCTGGTGCTTTGTGGGTGC 61.181 55.000 0.00 0.00 0.00 5.01
2526 2727 2.837291 TGGTGCTTTGTGGGTGCC 60.837 61.111 0.00 0.00 0.00 5.01
2527 2728 2.521708 GGTGCTTTGTGGGTGCCT 60.522 61.111 0.00 0.00 0.00 4.75
2528 2729 1.228429 GGTGCTTTGTGGGTGCCTA 60.228 57.895 0.00 0.00 0.00 3.93
2529 2730 1.244019 GGTGCTTTGTGGGTGCCTAG 61.244 60.000 0.00 0.00 0.00 3.02
2530 2731 1.074775 TGCTTTGTGGGTGCCTAGG 59.925 57.895 3.67 3.67 0.00 3.02
2531 2732 1.074951 GCTTTGTGGGTGCCTAGGT 59.925 57.895 11.31 0.00 0.00 3.08
2532 2733 0.960861 GCTTTGTGGGTGCCTAGGTC 60.961 60.000 11.31 3.32 0.00 3.85
2533 2734 0.693049 CTTTGTGGGTGCCTAGGTCT 59.307 55.000 11.31 0.00 0.00 3.85
2534 2735 0.690762 TTTGTGGGTGCCTAGGTCTC 59.309 55.000 11.31 4.84 0.00 3.36
2535 2736 0.472925 TTGTGGGTGCCTAGGTCTCA 60.473 55.000 11.31 7.59 0.00 3.27
2536 2737 0.472925 TGTGGGTGCCTAGGTCTCAA 60.473 55.000 11.31 0.00 0.00 3.02
2537 2738 0.036294 GTGGGTGCCTAGGTCTCAAC 60.036 60.000 11.31 2.21 0.00 3.18
2538 2739 0.178903 TGGGTGCCTAGGTCTCAACT 60.179 55.000 11.31 0.00 0.00 3.16
2539 2740 0.250513 GGGTGCCTAGGTCTCAACTG 59.749 60.000 11.31 0.00 0.00 3.16
2540 2741 1.267121 GGTGCCTAGGTCTCAACTGA 58.733 55.000 11.31 0.00 0.00 3.41
2541 2742 1.066787 GGTGCCTAGGTCTCAACTGAC 60.067 57.143 11.31 0.00 36.31 3.51
2542 2743 1.618837 GTGCCTAGGTCTCAACTGACA 59.381 52.381 11.31 0.00 38.61 3.58
2543 2744 2.037251 GTGCCTAGGTCTCAACTGACAA 59.963 50.000 11.31 0.00 38.61 3.18
2544 2745 2.703536 TGCCTAGGTCTCAACTGACAAA 59.296 45.455 11.31 0.00 38.61 2.83
2545 2746 3.327757 TGCCTAGGTCTCAACTGACAAAT 59.672 43.478 11.31 0.00 38.61 2.32
2546 2747 3.686726 GCCTAGGTCTCAACTGACAAATG 59.313 47.826 11.31 0.00 38.61 2.32
2547 2748 4.256920 CCTAGGTCTCAACTGACAAATGG 58.743 47.826 0.00 0.00 38.61 3.16
2548 2749 4.020218 CCTAGGTCTCAACTGACAAATGGA 60.020 45.833 0.00 0.00 38.61 3.41
2549 2750 4.647564 AGGTCTCAACTGACAAATGGAT 57.352 40.909 0.00 0.00 38.61 3.41
2550 2751 4.990526 AGGTCTCAACTGACAAATGGATT 58.009 39.130 0.00 0.00 38.61 3.01
2551 2752 4.763793 AGGTCTCAACTGACAAATGGATTG 59.236 41.667 0.00 0.00 44.95 2.67
2552 2753 4.082571 GGTCTCAACTGACAAATGGATTGG 60.083 45.833 0.00 0.00 43.66 3.16
2557 2758 3.334078 GACAAATGGATTGGCGCTG 57.666 52.632 7.64 0.00 43.66 5.18
2558 2759 0.527565 GACAAATGGATTGGCGCTGT 59.472 50.000 7.64 0.00 43.66 4.40
2559 2760 0.968405 ACAAATGGATTGGCGCTGTT 59.032 45.000 7.64 0.00 43.66 3.16
2560 2761 2.163412 GACAAATGGATTGGCGCTGTTA 59.837 45.455 7.64 0.00 43.66 2.41
2561 2762 2.760092 ACAAATGGATTGGCGCTGTTAT 59.240 40.909 7.64 0.00 43.66 1.89
2562 2763 3.181487 ACAAATGGATTGGCGCTGTTATC 60.181 43.478 7.64 5.25 43.66 1.75
2563 2764 2.346766 ATGGATTGGCGCTGTTATCA 57.653 45.000 7.64 0.00 0.00 2.15
2564 2765 2.346766 TGGATTGGCGCTGTTATCAT 57.653 45.000 7.64 0.00 0.00 2.45
2565 2766 2.221169 TGGATTGGCGCTGTTATCATC 58.779 47.619 7.64 0.00 0.00 2.92
2566 2767 2.158769 TGGATTGGCGCTGTTATCATCT 60.159 45.455 7.64 0.00 0.00 2.90
2567 2768 2.481952 GGATTGGCGCTGTTATCATCTC 59.518 50.000 7.64 0.00 0.00 2.75
2568 2769 2.988010 TTGGCGCTGTTATCATCTCT 57.012 45.000 7.64 0.00 0.00 3.10
2569 2770 2.515926 TGGCGCTGTTATCATCTCTC 57.484 50.000 7.64 0.00 0.00 3.20
2570 2771 1.069204 TGGCGCTGTTATCATCTCTCC 59.931 52.381 7.64 0.00 0.00 3.71
2571 2772 1.069204 GGCGCTGTTATCATCTCTCCA 59.931 52.381 7.64 0.00 0.00 3.86
2572 2773 2.483714 GGCGCTGTTATCATCTCTCCAA 60.484 50.000 7.64 0.00 0.00 3.53
2573 2774 3.198068 GCGCTGTTATCATCTCTCCAAA 58.802 45.455 0.00 0.00 0.00 3.28
2574 2775 3.247173 GCGCTGTTATCATCTCTCCAAAG 59.753 47.826 0.00 0.00 0.00 2.77
2575 2776 3.806521 CGCTGTTATCATCTCTCCAAAGG 59.193 47.826 0.00 0.00 0.00 3.11
2576 2777 3.563390 GCTGTTATCATCTCTCCAAAGGC 59.437 47.826 0.00 0.00 0.00 4.35
2577 2778 4.133078 CTGTTATCATCTCTCCAAAGGCC 58.867 47.826 0.00 0.00 0.00 5.19
2578 2779 3.117888 TGTTATCATCTCTCCAAAGGCCC 60.118 47.826 0.00 0.00 0.00 5.80
2579 2780 1.600058 ATCATCTCTCCAAAGGCCCA 58.400 50.000 0.00 0.00 0.00 5.36
2580 2781 0.914644 TCATCTCTCCAAAGGCCCAG 59.085 55.000 0.00 0.00 0.00 4.45
2581 2782 0.750911 CATCTCTCCAAAGGCCCAGC 60.751 60.000 0.00 0.00 0.00 4.85
2582 2783 0.918310 ATCTCTCCAAAGGCCCAGCT 60.918 55.000 0.00 0.00 0.00 4.24
2583 2784 1.136329 TCTCTCCAAAGGCCCAGCTT 61.136 55.000 0.00 0.00 0.00 3.74
2584 2785 0.620556 CTCTCCAAAGGCCCAGCTTA 59.379 55.000 0.00 0.00 0.00 3.09
2585 2786 0.328258 TCTCCAAAGGCCCAGCTTAC 59.672 55.000 0.00 0.00 0.00 2.34
2586 2787 0.038166 CTCCAAAGGCCCAGCTTACA 59.962 55.000 0.00 0.00 0.00 2.41
2587 2788 0.038166 TCCAAAGGCCCAGCTTACAG 59.962 55.000 0.00 0.00 0.00 2.74
2588 2789 0.251341 CCAAAGGCCCAGCTTACAGT 60.251 55.000 0.00 0.00 0.00 3.55
2589 2790 1.004277 CCAAAGGCCCAGCTTACAGTA 59.996 52.381 0.00 0.00 0.00 2.74
2590 2791 2.554344 CCAAAGGCCCAGCTTACAGTAA 60.554 50.000 0.00 0.00 0.00 2.24
2591 2792 3.356290 CAAAGGCCCAGCTTACAGTAAT 58.644 45.455 0.00 0.00 0.00 1.89
2592 2793 3.283259 AAGGCCCAGCTTACAGTAATC 57.717 47.619 0.00 0.00 0.00 1.75
2593 2794 1.139058 AGGCCCAGCTTACAGTAATCG 59.861 52.381 0.00 0.00 0.00 3.34
2594 2795 1.583054 GCCCAGCTTACAGTAATCGG 58.417 55.000 0.00 0.00 0.00 4.18
2595 2796 1.134491 GCCCAGCTTACAGTAATCGGT 60.134 52.381 0.00 0.00 0.00 4.69
2596 2797 2.679930 GCCCAGCTTACAGTAATCGGTT 60.680 50.000 0.00 0.00 0.00 4.44
2597 2798 2.936498 CCCAGCTTACAGTAATCGGTTG 59.064 50.000 0.00 0.00 0.00 3.77
2598 2799 3.369052 CCCAGCTTACAGTAATCGGTTGA 60.369 47.826 0.00 0.00 0.00 3.18
2599 2800 3.865745 CCAGCTTACAGTAATCGGTTGAG 59.134 47.826 0.00 0.00 0.00 3.02
2600 2801 4.381612 CCAGCTTACAGTAATCGGTTGAGA 60.382 45.833 0.00 0.00 0.00 3.27
2601 2802 5.168569 CAGCTTACAGTAATCGGTTGAGAA 58.831 41.667 0.00 0.00 0.00 2.87
2602 2803 5.637810 CAGCTTACAGTAATCGGTTGAGAAA 59.362 40.000 0.00 0.00 0.00 2.52
2603 2804 6.313905 CAGCTTACAGTAATCGGTTGAGAAAT 59.686 38.462 0.00 0.00 0.00 2.17
2604 2805 6.879458 AGCTTACAGTAATCGGTTGAGAAATT 59.121 34.615 0.00 0.00 0.00 1.82
2605 2806 6.961554 GCTTACAGTAATCGGTTGAGAAATTG 59.038 38.462 0.00 0.00 0.00 2.32
2606 2807 5.880054 ACAGTAATCGGTTGAGAAATTGG 57.120 39.130 0.00 0.00 0.00 3.16
2607 2808 5.556915 ACAGTAATCGGTTGAGAAATTGGA 58.443 37.500 0.00 0.00 0.00 3.53
2608 2809 5.643777 ACAGTAATCGGTTGAGAAATTGGAG 59.356 40.000 0.00 0.00 0.00 3.86
2609 2810 5.874810 CAGTAATCGGTTGAGAAATTGGAGA 59.125 40.000 0.00 0.00 0.00 3.71
2610 2811 6.540189 CAGTAATCGGTTGAGAAATTGGAGAT 59.460 38.462 0.00 0.00 0.00 2.75
2611 2812 7.066284 CAGTAATCGGTTGAGAAATTGGAGATT 59.934 37.037 0.00 0.00 0.00 2.40
2612 2813 8.265055 AGTAATCGGTTGAGAAATTGGAGATTA 58.735 33.333 0.00 0.00 0.00 1.75
2613 2814 7.559590 AATCGGTTGAGAAATTGGAGATTAG 57.440 36.000 0.00 0.00 0.00 1.73
2614 2815 5.428253 TCGGTTGAGAAATTGGAGATTAGG 58.572 41.667 0.00 0.00 0.00 2.69
2615 2816 5.188948 TCGGTTGAGAAATTGGAGATTAGGA 59.811 40.000 0.00 0.00 0.00 2.94
2616 2817 5.880332 CGGTTGAGAAATTGGAGATTAGGAA 59.120 40.000 0.00 0.00 0.00 3.36
2617 2818 6.543831 CGGTTGAGAAATTGGAGATTAGGAAT 59.456 38.462 0.00 0.00 0.00 3.01
2618 2819 7.067494 CGGTTGAGAAATTGGAGATTAGGAATT 59.933 37.037 0.00 0.00 0.00 2.17
2619 2820 8.753133 GGTTGAGAAATTGGAGATTAGGAATTT 58.247 33.333 0.00 0.00 32.10 1.82
2622 2823 9.532494 TGAGAAATTGGAGATTAGGAATTTTCA 57.468 29.630 0.00 0.00 30.11 2.69
2628 2829 8.940397 TTGGAGATTAGGAATTTTCAAAGTCT 57.060 30.769 0.23 0.00 33.80 3.24
2630 2831 9.672673 TGGAGATTAGGAATTTTCAAAGTCTAG 57.327 33.333 0.23 0.00 33.80 2.43
2631 2832 9.674068 GGAGATTAGGAATTTTCAAAGTCTAGT 57.326 33.333 0.23 0.00 33.80 2.57
2637 2838 8.753497 AGGAATTTTCAAAGTCTAGTTTCAGT 57.247 30.769 0.23 0.00 33.80 3.41
2638 2839 9.190317 AGGAATTTTCAAAGTCTAGTTTCAGTT 57.810 29.630 0.23 0.00 33.80 3.16
2639 2840 9.237846 GGAATTTTCAAAGTCTAGTTTCAGTTG 57.762 33.333 0.23 0.00 33.80 3.16
2640 2841 9.237846 GAATTTTCAAAGTCTAGTTTCAGTTGG 57.762 33.333 0.00 0.00 30.89 3.77
2641 2842 7.696992 TTTTCAAAGTCTAGTTTCAGTTGGT 57.303 32.000 0.00 0.00 0.00 3.67
2642 2843 6.677781 TTCAAAGTCTAGTTTCAGTTGGTG 57.322 37.500 0.00 0.00 0.00 4.17
2643 2844 4.574828 TCAAAGTCTAGTTTCAGTTGGTGC 59.425 41.667 0.00 0.00 0.00 5.01
2644 2845 4.423625 AAGTCTAGTTTCAGTTGGTGCT 57.576 40.909 0.00 0.00 0.00 4.40
2645 2846 3.996480 AGTCTAGTTTCAGTTGGTGCTC 58.004 45.455 0.00 0.00 0.00 4.26
2646 2847 3.067833 GTCTAGTTTCAGTTGGTGCTCC 58.932 50.000 0.00 0.00 0.00 4.70
2647 2848 2.703536 TCTAGTTTCAGTTGGTGCTCCA 59.296 45.455 2.64 2.64 42.66 3.86
2655 2856 2.926250 TGGTGCTCCAAAGGCAGT 59.074 55.556 4.68 0.00 41.25 4.40
2656 2857 1.229927 TGGTGCTCCAAAGGCAGTT 59.770 52.632 4.68 0.00 41.25 3.16
2657 2858 1.108727 TGGTGCTCCAAAGGCAGTTG 61.109 55.000 4.68 0.00 41.25 3.16
2658 2859 0.823356 GGTGCTCCAAAGGCAGTTGA 60.823 55.000 0.00 0.00 40.54 3.18
2659 2860 1.032014 GTGCTCCAAAGGCAGTTGAA 58.968 50.000 2.79 0.00 40.54 2.69
2660 2861 1.615392 GTGCTCCAAAGGCAGTTGAAT 59.385 47.619 2.79 0.00 40.54 2.57
2661 2862 2.819608 GTGCTCCAAAGGCAGTTGAATA 59.180 45.455 2.79 0.00 40.54 1.75
2662 2863 3.255642 GTGCTCCAAAGGCAGTTGAATAA 59.744 43.478 2.79 0.00 40.54 1.40
2663 2864 3.894427 TGCTCCAAAGGCAGTTGAATAAA 59.106 39.130 2.79 0.00 34.56 1.40
2664 2865 4.527816 TGCTCCAAAGGCAGTTGAATAAAT 59.472 37.500 2.79 0.00 34.56 1.40
2665 2866 5.714333 TGCTCCAAAGGCAGTTGAATAAATA 59.286 36.000 2.79 0.00 34.56 1.40
2666 2867 6.210385 TGCTCCAAAGGCAGTTGAATAAATAA 59.790 34.615 2.79 0.00 34.56 1.40
2667 2868 7.096551 GCTCCAAAGGCAGTTGAATAAATAAA 58.903 34.615 2.79 0.00 0.00 1.40
2668 2869 7.765819 GCTCCAAAGGCAGTTGAATAAATAAAT 59.234 33.333 2.79 0.00 0.00 1.40
2696 2897 9.607988 AATAAGGTGTTGATATACGATTGTTCA 57.392 29.630 0.00 0.00 0.00 3.18
2697 2898 7.915293 AAGGTGTTGATATACGATTGTTCAA 57.085 32.000 0.00 0.00 0.00 2.69
2698 2899 7.915293 AGGTGTTGATATACGATTGTTCAAA 57.085 32.000 1.09 0.00 27.42 2.69
2699 2900 7.974675 AGGTGTTGATATACGATTGTTCAAAG 58.025 34.615 1.09 0.00 27.42 2.77
2700 2901 7.606456 AGGTGTTGATATACGATTGTTCAAAGT 59.394 33.333 1.09 0.00 27.42 2.66
2701 2902 8.234546 GGTGTTGATATACGATTGTTCAAAGTT 58.765 33.333 1.09 0.00 27.42 2.66
2710 2911 6.206498 ACGATTGTTCAAAGTTAAAGGAAGC 58.794 36.000 0.00 0.00 0.00 3.86
2711 2912 5.339611 CGATTGTTCAAAGTTAAAGGAAGCG 59.660 40.000 0.00 0.00 0.00 4.68
2712 2913 4.561735 TGTTCAAAGTTAAAGGAAGCGG 57.438 40.909 0.00 0.00 0.00 5.52
2713 2914 4.200874 TGTTCAAAGTTAAAGGAAGCGGA 58.799 39.130 0.00 0.00 0.00 5.54
2714 2915 4.825085 TGTTCAAAGTTAAAGGAAGCGGAT 59.175 37.500 0.00 0.00 0.00 4.18
2715 2916 5.154222 GTTCAAAGTTAAAGGAAGCGGATG 58.846 41.667 0.00 0.00 0.00 3.51
2716 2917 4.647611 TCAAAGTTAAAGGAAGCGGATGA 58.352 39.130 0.00 0.00 0.00 2.92
2717 2918 4.695455 TCAAAGTTAAAGGAAGCGGATGAG 59.305 41.667 0.00 0.00 0.00 2.90
2718 2919 4.553330 AAGTTAAAGGAAGCGGATGAGA 57.447 40.909 0.00 0.00 0.00 3.27
2719 2920 4.762289 AGTTAAAGGAAGCGGATGAGAT 57.238 40.909 0.00 0.00 0.00 2.75
2720 2921 4.698575 AGTTAAAGGAAGCGGATGAGATC 58.301 43.478 0.00 0.00 0.00 2.75
2721 2922 4.162320 AGTTAAAGGAAGCGGATGAGATCA 59.838 41.667 0.00 0.00 0.00 2.92
2722 2923 3.634397 AAAGGAAGCGGATGAGATCAA 57.366 42.857 0.00 0.00 0.00 2.57
2723 2924 3.853355 AAGGAAGCGGATGAGATCAAT 57.147 42.857 0.00 0.00 0.00 2.57
2724 2925 4.963318 AAGGAAGCGGATGAGATCAATA 57.037 40.909 0.00 0.00 0.00 1.90
2725 2926 4.533919 AGGAAGCGGATGAGATCAATAG 57.466 45.455 0.00 0.00 0.00 1.73
2726 2927 4.155709 AGGAAGCGGATGAGATCAATAGA 58.844 43.478 0.00 0.00 0.00 1.98
2727 2928 4.590647 AGGAAGCGGATGAGATCAATAGAA 59.409 41.667 0.00 0.00 0.00 2.10
2728 2929 4.928615 GGAAGCGGATGAGATCAATAGAAG 59.071 45.833 0.00 0.00 0.00 2.85
2729 2930 5.279206 GGAAGCGGATGAGATCAATAGAAGA 60.279 44.000 0.00 0.00 0.00 2.87
2730 2931 5.999205 AGCGGATGAGATCAATAGAAGAT 57.001 39.130 0.00 0.00 0.00 2.40
2731 2932 5.964758 AGCGGATGAGATCAATAGAAGATC 58.035 41.667 0.00 0.00 41.68 2.75
2732 2933 5.105392 AGCGGATGAGATCAATAGAAGATCC 60.105 44.000 0.00 0.00 42.19 3.36
2733 2934 5.659463 CGGATGAGATCAATAGAAGATCCC 58.341 45.833 0.00 0.00 42.19 3.85
2734 2935 5.659463 GGATGAGATCAATAGAAGATCCCG 58.341 45.833 0.00 0.00 42.19 5.14
2735 2936 4.527509 TGAGATCAATAGAAGATCCCGC 57.472 45.455 0.00 0.00 42.19 6.13
2736 2937 3.259374 TGAGATCAATAGAAGATCCCGCC 59.741 47.826 0.00 0.00 42.19 6.13
2737 2938 3.513515 GAGATCAATAGAAGATCCCGCCT 59.486 47.826 0.00 0.00 42.19 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.729862 TGCATGCATGTGAGACAAAAA 57.270 38.095 26.79 0.00 0.00 1.94
1 2 3.945981 ATGCATGCATGTGAGACAAAA 57.054 38.095 31.74 0.00 35.03 2.44
2 3 3.256136 TGAATGCATGCATGTGAGACAAA 59.744 39.130 32.79 8.79 36.68 2.83
3 4 2.820787 TGAATGCATGCATGTGAGACAA 59.179 40.909 32.79 10.26 36.68 3.18
5 6 2.162809 TGTGAATGCATGCATGTGAGAC 59.837 45.455 32.79 22.37 36.68 3.36
6 7 2.162809 GTGTGAATGCATGCATGTGAGA 59.837 45.455 32.79 15.48 36.68 3.27
7 8 2.163613 AGTGTGAATGCATGCATGTGAG 59.836 45.455 32.79 2.78 36.68 3.51
8 9 2.164338 AGTGTGAATGCATGCATGTGA 58.836 42.857 32.79 16.98 36.68 3.58
9 10 2.647529 AGTGTGAATGCATGCATGTG 57.352 45.000 32.79 5.68 36.68 3.21
10 11 4.787260 TTAAGTGTGAATGCATGCATGT 57.213 36.364 32.79 21.80 36.68 3.21
11 12 5.808030 TGATTTAAGTGTGAATGCATGCATG 59.192 36.000 32.79 22.70 36.68 4.06
12 13 5.968254 TGATTTAAGTGTGAATGCATGCAT 58.032 33.333 27.46 27.46 38.46 3.96
13 14 5.388408 TGATTTAAGTGTGAATGCATGCA 57.612 34.783 25.04 25.04 0.00 3.96
14 15 6.897259 ATTGATTTAAGTGTGAATGCATGC 57.103 33.333 11.82 11.82 0.00 4.06
15 16 7.546316 TCCAATTGATTTAAGTGTGAATGCATG 59.454 33.333 7.12 0.00 32.68 4.06
16 17 7.546667 GTCCAATTGATTTAAGTGTGAATGCAT 59.453 33.333 7.12 0.00 32.68 3.96
17 18 6.867816 GTCCAATTGATTTAAGTGTGAATGCA 59.132 34.615 7.12 0.00 32.68 3.96
18 19 6.867816 TGTCCAATTGATTTAAGTGTGAATGC 59.132 34.615 7.12 0.00 32.68 3.56
19 20 7.060979 CGTGTCCAATTGATTTAAGTGTGAATG 59.939 37.037 7.12 0.00 32.68 2.67
20 21 7.083858 CGTGTCCAATTGATTTAAGTGTGAAT 58.916 34.615 7.12 0.00 32.68 2.57
21 22 6.434596 CGTGTCCAATTGATTTAAGTGTGAA 58.565 36.000 7.12 0.00 32.68 3.18
22 23 5.049060 CCGTGTCCAATTGATTTAAGTGTGA 60.049 40.000 7.12 0.00 32.68 3.58
23 24 5.049060 TCCGTGTCCAATTGATTTAAGTGTG 60.049 40.000 7.12 0.00 32.68 3.82
24 25 5.067273 TCCGTGTCCAATTGATTTAAGTGT 58.933 37.500 7.12 0.00 32.68 3.55
25 26 5.621197 TCCGTGTCCAATTGATTTAAGTG 57.379 39.130 7.12 0.00 34.28 3.16
26 27 5.393027 GCATCCGTGTCCAATTGATTTAAGT 60.393 40.000 7.12 0.00 0.00 2.24
27 28 5.036737 GCATCCGTGTCCAATTGATTTAAG 58.963 41.667 7.12 0.00 0.00 1.85
28 29 4.704540 AGCATCCGTGTCCAATTGATTTAA 59.295 37.500 7.12 0.00 0.00 1.52
29 30 4.269183 AGCATCCGTGTCCAATTGATTTA 58.731 39.130 7.12 0.00 0.00 1.40
30 31 3.091545 AGCATCCGTGTCCAATTGATTT 58.908 40.909 7.12 0.00 0.00 2.17
31 32 2.726821 AGCATCCGTGTCCAATTGATT 58.273 42.857 7.12 0.00 0.00 2.57
32 33 2.425143 AGCATCCGTGTCCAATTGAT 57.575 45.000 7.12 0.00 0.00 2.57
33 34 2.083774 GAAGCATCCGTGTCCAATTGA 58.916 47.619 7.12 0.00 0.00 2.57
34 35 1.133025 GGAAGCATCCGTGTCCAATTG 59.867 52.381 0.00 0.00 35.59 2.32
35 36 1.463674 GGAAGCATCCGTGTCCAATT 58.536 50.000 0.00 0.00 35.59 2.32
36 37 3.175133 GGAAGCATCCGTGTCCAAT 57.825 52.632 0.00 0.00 35.59 3.16
37 38 4.713946 GGAAGCATCCGTGTCCAA 57.286 55.556 0.00 0.00 35.59 3.53
66 67 0.519077 GTGCTGAGGAAAAAGCGGAG 59.481 55.000 0.00 0.00 42.54 4.63
67 68 0.179032 TGTGCTGAGGAAAAAGCGGA 60.179 50.000 0.00 0.00 42.54 5.54
68 69 0.040067 GTGTGCTGAGGAAAAAGCGG 60.040 55.000 0.00 0.00 42.54 5.52
69 70 0.040067 GGTGTGCTGAGGAAAAAGCG 60.040 55.000 0.00 0.00 42.54 4.68
70 71 0.040067 CGGTGTGCTGAGGAAAAAGC 60.040 55.000 0.00 0.00 39.96 3.51
71 72 0.040067 GCGGTGTGCTGAGGAAAAAG 60.040 55.000 0.00 0.00 41.73 2.27
72 73 0.749818 TGCGGTGTGCTGAGGAAAAA 60.750 50.000 0.00 0.00 46.63 1.94
73 74 0.749818 TTGCGGTGTGCTGAGGAAAA 60.750 50.000 0.00 0.00 46.63 2.29
74 75 0.537143 ATTGCGGTGTGCTGAGGAAA 60.537 50.000 0.00 0.00 46.63 3.13
75 76 0.955428 GATTGCGGTGTGCTGAGGAA 60.955 55.000 0.00 0.00 46.63 3.36
76 77 1.375908 GATTGCGGTGTGCTGAGGA 60.376 57.895 0.00 0.00 46.63 3.71
77 78 0.957395 AAGATTGCGGTGTGCTGAGG 60.957 55.000 0.00 0.00 46.63 3.86
78 79 0.167470 CAAGATTGCGGTGTGCTGAG 59.833 55.000 0.00 0.00 46.63 3.35
79 80 1.855213 GCAAGATTGCGGTGTGCTGA 61.855 55.000 1.16 0.00 45.11 4.26
80 81 1.443194 GCAAGATTGCGGTGTGCTG 60.443 57.895 1.16 0.00 45.11 4.41
81 82 2.956987 GCAAGATTGCGGTGTGCT 59.043 55.556 1.16 0.00 45.11 4.40
97 98 0.169672 CTAGTGGTTGTGCATGCTGC 59.830 55.000 20.33 12.29 45.29 5.25
98 99 1.527034 ACTAGTGGTTGTGCATGCTG 58.473 50.000 20.33 0.00 0.00 4.41
99 100 2.154462 GAACTAGTGGTTGTGCATGCT 58.846 47.619 20.33 0.00 38.41 3.79
100 101 2.095567 CAGAACTAGTGGTTGTGCATGC 60.096 50.000 11.82 11.82 41.18 4.06
101 102 3.818961 CAGAACTAGTGGTTGTGCATG 57.181 47.619 3.56 0.00 41.18 4.06
122 123 2.969628 ATCAAAGGACCAGCGACTAG 57.030 50.000 0.00 0.00 0.00 2.57
123 124 2.832129 AGAATCAAAGGACCAGCGACTA 59.168 45.455 0.00 0.00 0.00 2.59
124 125 1.625818 AGAATCAAAGGACCAGCGACT 59.374 47.619 0.00 0.00 0.00 4.18
125 126 1.734465 CAGAATCAAAGGACCAGCGAC 59.266 52.381 0.00 0.00 0.00 5.19
126 127 1.347707 ACAGAATCAAAGGACCAGCGA 59.652 47.619 0.00 0.00 0.00 4.93
127 128 1.813513 ACAGAATCAAAGGACCAGCG 58.186 50.000 0.00 0.00 0.00 5.18
128 129 3.858503 GCAAACAGAATCAAAGGACCAGC 60.859 47.826 0.00 0.00 0.00 4.85
129 130 3.318839 TGCAAACAGAATCAAAGGACCAG 59.681 43.478 0.00 0.00 0.00 4.00
130 131 3.068024 GTGCAAACAGAATCAAAGGACCA 59.932 43.478 0.00 0.00 0.00 4.02
131 132 3.319122 AGTGCAAACAGAATCAAAGGACC 59.681 43.478 0.00 0.00 0.00 4.46
132 133 4.540824 GAGTGCAAACAGAATCAAAGGAC 58.459 43.478 0.00 0.00 0.00 3.85
133 134 3.250762 CGAGTGCAAACAGAATCAAAGGA 59.749 43.478 0.00 0.00 0.00 3.36
134 135 3.003689 ACGAGTGCAAACAGAATCAAAGG 59.996 43.478 0.00 0.00 0.00 3.11
135 136 4.214437 GACGAGTGCAAACAGAATCAAAG 58.786 43.478 0.00 0.00 0.00 2.77
136 137 3.003275 GGACGAGTGCAAACAGAATCAAA 59.997 43.478 0.00 0.00 0.00 2.69
137 138 2.548057 GGACGAGTGCAAACAGAATCAA 59.452 45.455 0.00 0.00 0.00 2.57
138 139 2.143122 GGACGAGTGCAAACAGAATCA 58.857 47.619 0.00 0.00 0.00 2.57
139 140 1.126846 CGGACGAGTGCAAACAGAATC 59.873 52.381 0.00 0.00 0.00 2.52
140 141 1.148310 CGGACGAGTGCAAACAGAAT 58.852 50.000 0.00 0.00 0.00 2.40
141 142 0.878523 CCGGACGAGTGCAAACAGAA 60.879 55.000 0.00 0.00 0.00 3.02
142 143 1.300620 CCGGACGAGTGCAAACAGA 60.301 57.895 0.00 0.00 0.00 3.41
143 144 0.670546 ATCCGGACGAGTGCAAACAG 60.671 55.000 6.12 0.00 0.00 3.16
144 145 0.669318 GATCCGGACGAGTGCAAACA 60.669 55.000 6.12 0.00 0.00 2.83
145 146 0.389948 AGATCCGGACGAGTGCAAAC 60.390 55.000 6.12 0.00 0.00 2.93
146 147 0.389817 CAGATCCGGACGAGTGCAAA 60.390 55.000 6.12 0.00 0.00 3.68
147 148 1.215382 CAGATCCGGACGAGTGCAA 59.785 57.895 6.12 0.00 0.00 4.08
148 149 1.532604 AACAGATCCGGACGAGTGCA 61.533 55.000 6.12 0.00 0.00 4.57
149 150 0.802607 GAACAGATCCGGACGAGTGC 60.803 60.000 6.12 0.00 0.00 4.40
150 151 0.179134 GGAACAGATCCGGACGAGTG 60.179 60.000 6.12 4.27 38.79 3.51
151 152 2.190756 GGAACAGATCCGGACGAGT 58.809 57.895 6.12 1.72 38.79 4.18
160 161 3.802685 CGGTCGGATTTTAGGAACAGATC 59.197 47.826 0.00 0.00 0.00 2.75
161 162 3.197116 ACGGTCGGATTTTAGGAACAGAT 59.803 43.478 0.00 0.00 0.00 2.90
162 163 2.564062 ACGGTCGGATTTTAGGAACAGA 59.436 45.455 0.00 0.00 0.00 3.41
163 164 2.968675 ACGGTCGGATTTTAGGAACAG 58.031 47.619 0.00 0.00 0.00 3.16
164 165 4.435425 CATACGGTCGGATTTTAGGAACA 58.565 43.478 0.00 0.00 0.00 3.18
165 166 3.805971 CCATACGGTCGGATTTTAGGAAC 59.194 47.826 0.00 0.00 0.00 3.62
166 167 3.705579 TCCATACGGTCGGATTTTAGGAA 59.294 43.478 0.00 0.00 0.00 3.36
167 168 3.068590 GTCCATACGGTCGGATTTTAGGA 59.931 47.826 2.86 0.00 32.83 2.94
168 169 3.387397 GTCCATACGGTCGGATTTTAGG 58.613 50.000 2.86 0.00 32.83 2.69
169 170 3.047796 CGTCCATACGGTCGGATTTTAG 58.952 50.000 2.86 0.00 45.50 1.85
170 171 3.082698 CGTCCATACGGTCGGATTTTA 57.917 47.619 2.86 0.00 45.50 1.52
171 172 1.930567 CGTCCATACGGTCGGATTTT 58.069 50.000 2.86 0.00 45.50 1.82
172 173 3.654178 CGTCCATACGGTCGGATTT 57.346 52.632 2.86 0.00 45.50 2.17
182 183 1.076332 GAGTGTGCCAACGTCCATAC 58.924 55.000 0.00 0.00 0.00 2.39
183 184 0.036765 GGAGTGTGCCAACGTCCATA 60.037 55.000 0.00 0.00 33.87 2.74
184 185 1.302511 GGAGTGTGCCAACGTCCAT 60.303 57.895 0.00 0.00 33.87 3.41
185 186 1.116536 TAGGAGTGTGCCAACGTCCA 61.117 55.000 0.00 0.00 35.41 4.02
186 187 0.389948 CTAGGAGTGTGCCAACGTCC 60.390 60.000 0.00 0.00 33.87 4.79
187 188 0.601558 TCTAGGAGTGTGCCAACGTC 59.398 55.000 0.00 0.00 0.00 4.34
188 189 1.267121 ATCTAGGAGTGTGCCAACGT 58.733 50.000 0.00 0.00 0.00 3.99
189 190 2.386661 AATCTAGGAGTGTGCCAACG 57.613 50.000 0.00 0.00 0.00 4.10
190 191 6.151144 ACAATAAAATCTAGGAGTGTGCCAAC 59.849 38.462 0.00 0.00 0.00 3.77
191 192 6.245408 ACAATAAAATCTAGGAGTGTGCCAA 58.755 36.000 0.00 0.00 0.00 4.52
192 193 5.815581 ACAATAAAATCTAGGAGTGTGCCA 58.184 37.500 0.00 0.00 0.00 4.92
193 194 7.859325 TTACAATAAAATCTAGGAGTGTGCC 57.141 36.000 0.00 0.00 0.00 5.01
194 195 8.947115 AGTTTACAATAAAATCTAGGAGTGTGC 58.053 33.333 0.00 0.00 0.00 4.57
198 199 8.957466 GCCAAGTTTACAATAAAATCTAGGAGT 58.043 33.333 0.00 0.00 0.00 3.85
199 200 9.178758 AGCCAAGTTTACAATAAAATCTAGGAG 57.821 33.333 0.00 0.00 0.00 3.69
200 201 9.174166 GAGCCAAGTTTACAATAAAATCTAGGA 57.826 33.333 0.00 0.00 0.00 2.94
201 202 9.178758 AGAGCCAAGTTTACAATAAAATCTAGG 57.821 33.333 0.00 0.00 0.00 3.02
202 203 9.994432 CAGAGCCAAGTTTACAATAAAATCTAG 57.006 33.333 0.00 0.00 0.00 2.43
203 204 8.956426 CCAGAGCCAAGTTTACAATAAAATCTA 58.044 33.333 0.00 0.00 0.00 1.98
204 205 7.577616 GCCAGAGCCAAGTTTACAATAAAATCT 60.578 37.037 0.00 0.00 0.00 2.40
205 206 6.531594 GCCAGAGCCAAGTTTACAATAAAATC 59.468 38.462 0.00 0.00 0.00 2.17
206 207 6.211384 AGCCAGAGCCAAGTTTACAATAAAAT 59.789 34.615 0.00 0.00 41.25 1.82
207 208 5.538433 AGCCAGAGCCAAGTTTACAATAAAA 59.462 36.000 0.00 0.00 41.25 1.52
208 209 5.048083 CAGCCAGAGCCAAGTTTACAATAAA 60.048 40.000 0.00 0.00 41.25 1.40
209 210 4.458989 CAGCCAGAGCCAAGTTTACAATAA 59.541 41.667 0.00 0.00 41.25 1.40
210 211 4.009675 CAGCCAGAGCCAAGTTTACAATA 58.990 43.478 0.00 0.00 41.25 1.90
211 212 2.821969 CAGCCAGAGCCAAGTTTACAAT 59.178 45.455 0.00 0.00 41.25 2.71
212 213 2.158682 TCAGCCAGAGCCAAGTTTACAA 60.159 45.455 0.00 0.00 41.25 2.41
213 214 1.419762 TCAGCCAGAGCCAAGTTTACA 59.580 47.619 0.00 0.00 41.25 2.41
214 215 2.185004 TCAGCCAGAGCCAAGTTTAC 57.815 50.000 0.00 0.00 41.25 2.01
215 216 2.949177 TTCAGCCAGAGCCAAGTTTA 57.051 45.000 0.00 0.00 41.25 2.01
216 217 2.071778 TTTCAGCCAGAGCCAAGTTT 57.928 45.000 0.00 0.00 41.25 2.66
217 218 1.959282 CTTTTCAGCCAGAGCCAAGTT 59.041 47.619 0.00 0.00 41.25 2.66
218 219 1.613836 CTTTTCAGCCAGAGCCAAGT 58.386 50.000 0.00 0.00 41.25 3.16
219 220 0.243095 GCTTTTCAGCCAGAGCCAAG 59.757 55.000 0.00 0.00 40.61 3.61
220 221 2.344535 GCTTTTCAGCCAGAGCCAA 58.655 52.632 0.00 0.00 40.61 4.52
221 222 4.085876 GCTTTTCAGCCAGAGCCA 57.914 55.556 0.00 0.00 40.61 4.75
229 230 1.916697 GCTCACGGAGGCTTTTCAGC 61.917 60.000 0.00 0.00 46.52 4.26
230 231 0.603707 TGCTCACGGAGGCTTTTCAG 60.604 55.000 0.00 0.00 0.00 3.02
231 232 0.179032 TTGCTCACGGAGGCTTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
232 233 1.135575 CATTGCTCACGGAGGCTTTTC 60.136 52.381 0.00 0.00 0.00 2.29
233 234 0.883833 CATTGCTCACGGAGGCTTTT 59.116 50.000 0.00 0.00 0.00 2.27
234 235 0.036732 TCATTGCTCACGGAGGCTTT 59.963 50.000 0.00 0.00 0.00 3.51
235 236 0.392193 CTCATTGCTCACGGAGGCTT 60.392 55.000 0.00 0.00 0.00 4.35
236 237 1.220206 CTCATTGCTCACGGAGGCT 59.780 57.895 0.00 0.00 0.00 4.58
237 238 0.391661 TTCTCATTGCTCACGGAGGC 60.392 55.000 3.56 0.00 0.00 4.70
238 239 2.208431 GATTCTCATTGCTCACGGAGG 58.792 52.381 3.56 0.00 0.00 4.30
239 240 2.208431 GGATTCTCATTGCTCACGGAG 58.792 52.381 0.00 0.00 0.00 4.63
240 241 1.134401 GGGATTCTCATTGCTCACGGA 60.134 52.381 0.00 0.00 0.00 4.69
241 242 1.303309 GGGATTCTCATTGCTCACGG 58.697 55.000 0.00 0.00 0.00 4.94
242 243 1.134280 AGGGGATTCTCATTGCTCACG 60.134 52.381 0.00 0.00 0.00 4.35
243 244 2.725221 AGGGGATTCTCATTGCTCAC 57.275 50.000 0.00 0.00 0.00 3.51
244 245 3.744940 AAAGGGGATTCTCATTGCTCA 57.255 42.857 0.00 0.00 0.00 4.26
245 246 4.019174 TGAAAAGGGGATTCTCATTGCTC 58.981 43.478 0.00 0.00 0.00 4.26
246 247 3.766051 GTGAAAAGGGGATTCTCATTGCT 59.234 43.478 0.00 0.00 0.00 3.91
247 248 3.118992 GGTGAAAAGGGGATTCTCATTGC 60.119 47.826 0.00 0.00 0.00 3.56
248 249 3.448660 GGGTGAAAAGGGGATTCTCATTG 59.551 47.826 0.00 0.00 0.00 2.82
249 250 3.713003 GGGTGAAAAGGGGATTCTCATT 58.287 45.455 0.00 0.00 0.00 2.57
250 251 2.357154 CGGGTGAAAAGGGGATTCTCAT 60.357 50.000 0.00 0.00 0.00 2.90
251 252 1.004277 CGGGTGAAAAGGGGATTCTCA 59.996 52.381 0.00 0.00 0.00 3.27
252 253 1.004394 ACGGGTGAAAAGGGGATTCTC 59.996 52.381 0.00 0.00 0.00 2.87
253 254 1.073098 ACGGGTGAAAAGGGGATTCT 58.927 50.000 0.00 0.00 0.00 2.40
254 255 2.793288 TACGGGTGAAAAGGGGATTC 57.207 50.000 0.00 0.00 0.00 2.52
255 256 3.529216 TTTACGGGTGAAAAGGGGATT 57.471 42.857 0.00 0.00 0.00 3.01
256 257 3.529216 TTTTACGGGTGAAAAGGGGAT 57.471 42.857 0.00 0.00 0.00 3.85
257 258 3.309600 TTTTTACGGGTGAAAAGGGGA 57.690 42.857 0.00 0.00 0.00 4.81
287 288 2.692709 TTCCCCAGCATCCAGAAAAA 57.307 45.000 0.00 0.00 0.00 1.94
288 289 2.692709 TTTCCCCAGCATCCAGAAAA 57.307 45.000 0.00 0.00 0.00 2.29
289 290 2.312741 AGATTTCCCCAGCATCCAGAAA 59.687 45.455 0.00 0.00 0.00 2.52
290 291 1.925255 AGATTTCCCCAGCATCCAGAA 59.075 47.619 0.00 0.00 0.00 3.02
291 292 1.600058 AGATTTCCCCAGCATCCAGA 58.400 50.000 0.00 0.00 0.00 3.86
292 293 2.449137 AAGATTTCCCCAGCATCCAG 57.551 50.000 0.00 0.00 0.00 3.86
293 294 2.925966 AAAGATTTCCCCAGCATCCA 57.074 45.000 0.00 0.00 0.00 3.41
294 295 5.675684 TTTTAAAGATTTCCCCAGCATCC 57.324 39.130 0.00 0.00 0.00 3.51
314 315 8.969260 AAGGATTTTTCTCTGCAATTCTTTTT 57.031 26.923 0.00 0.00 0.00 1.94
315 316 8.969260 AAAGGATTTTTCTCTGCAATTCTTTT 57.031 26.923 0.00 0.00 33.61 2.27
359 360 4.564821 CCTCCGTTCCCACTAAGATTTTCA 60.565 45.833 0.00 0.00 0.00 2.69
999 1035 1.447217 CATCAGCTCGGCACCCATA 59.553 57.895 0.00 0.00 0.00 2.74
1440 1519 2.425592 CCGTCAAGGACCTGCACA 59.574 61.111 0.00 0.00 45.00 4.57
1665 1768 1.682684 GAGGCCCTCGACCTTCTCA 60.683 63.158 0.00 0.00 37.77 3.27
1759 1862 5.905913 ACCAACCTAGGCTATCAATTACTCT 59.094 40.000 9.30 0.00 0.00 3.24
1781 1888 6.816640 AGCCTTTTTCTTTACTGAAAAACACC 59.183 34.615 10.02 3.91 45.32 4.16
1814 1922 4.800471 GCTGGAAACTGAACTGTTTTCTTG 59.200 41.667 13.72 9.32 39.86 3.02
1994 2167 4.759693 CACACTGCAACAAATTCCCTACTA 59.240 41.667 0.00 0.00 0.00 1.82
2037 2210 3.681594 GCATACACTGCCTTACTGCCTTA 60.682 47.826 0.00 0.00 45.66 2.69
2038 2211 2.941415 GCATACACTGCCTTACTGCCTT 60.941 50.000 0.00 0.00 45.66 4.35
2039 2212 1.407437 GCATACACTGCCTTACTGCCT 60.407 52.381 0.00 0.00 45.66 4.75
2040 2213 1.017387 GCATACACTGCCTTACTGCC 58.983 55.000 0.00 0.00 45.66 4.85
2096 2292 6.436843 AAAGCGCAGTAATTAAGTAAGCAT 57.563 33.333 11.47 0.00 0.00 3.79
2141 2337 6.283694 TGCAAACCAAATTGTTGTAGCATAA 58.716 32.000 0.00 0.00 31.05 1.90
2377 2578 2.890945 AGCTTAAAATGTTGGAGCGGTT 59.109 40.909 0.00 0.00 38.34 4.44
2421 2622 4.316823 TCCGGCTCCACCACTCCT 62.317 66.667 0.00 0.00 39.03 3.69
2442 2643 1.066143 CACAATAGGCCTGTTCGGAGT 60.066 52.381 17.99 6.30 33.16 3.85
2472 2673 3.885901 GGAAAACTCTCAAGCCTTTCACT 59.114 43.478 0.00 0.00 32.83 3.41
2473 2674 3.885901 AGGAAAACTCTCAAGCCTTTCAC 59.114 43.478 0.00 0.00 32.83 3.18
2474 2675 4.170468 AGGAAAACTCTCAAGCCTTTCA 57.830 40.909 0.00 0.00 32.83 2.69
2475 2676 6.657117 AGATAAGGAAAACTCTCAAGCCTTTC 59.343 38.462 0.00 0.00 37.05 2.62
2476 2677 6.432472 CAGATAAGGAAAACTCTCAAGCCTTT 59.568 38.462 0.00 0.00 37.05 3.11
2477 2678 5.942826 CAGATAAGGAAAACTCTCAAGCCTT 59.057 40.000 0.00 0.00 39.02 4.35
2478 2679 5.249393 TCAGATAAGGAAAACTCTCAAGCCT 59.751 40.000 0.00 0.00 0.00 4.58
2479 2680 5.491982 TCAGATAAGGAAAACTCTCAAGCC 58.508 41.667 0.00 0.00 0.00 4.35
2480 2681 7.389053 TCTTTCAGATAAGGAAAACTCTCAAGC 59.611 37.037 0.00 0.00 34.15 4.01
2481 2682 8.839310 TCTTTCAGATAAGGAAAACTCTCAAG 57.161 34.615 0.00 0.00 34.15 3.02
2482 2683 9.442047 GATCTTTCAGATAAGGAAAACTCTCAA 57.558 33.333 0.00 0.00 34.53 3.02
2483 2684 8.820831 AGATCTTTCAGATAAGGAAAACTCTCA 58.179 33.333 0.00 0.00 34.53 3.27
2484 2685 9.097257 CAGATCTTTCAGATAAGGAAAACTCTC 57.903 37.037 0.00 0.00 34.53 3.20
2485 2686 8.046107 CCAGATCTTTCAGATAAGGAAAACTCT 58.954 37.037 0.00 0.00 34.53 3.24
2486 2687 7.826744 ACCAGATCTTTCAGATAAGGAAAACTC 59.173 37.037 0.00 0.00 34.53 3.01
2487 2688 7.609532 CACCAGATCTTTCAGATAAGGAAAACT 59.390 37.037 0.00 0.00 34.53 2.66
2488 2689 7.627300 GCACCAGATCTTTCAGATAAGGAAAAC 60.627 40.741 0.00 0.00 34.53 2.43
2489 2690 6.375455 GCACCAGATCTTTCAGATAAGGAAAA 59.625 38.462 0.00 0.00 34.53 2.29
2490 2691 5.882557 GCACCAGATCTTTCAGATAAGGAAA 59.117 40.000 0.00 0.00 34.53 3.13
2491 2692 5.190528 AGCACCAGATCTTTCAGATAAGGAA 59.809 40.000 0.00 0.00 34.53 3.36
2492 2693 4.718774 AGCACCAGATCTTTCAGATAAGGA 59.281 41.667 0.00 0.00 34.53 3.36
2493 2694 5.033589 AGCACCAGATCTTTCAGATAAGG 57.966 43.478 0.00 0.00 34.53 2.69
2494 2695 6.373774 ACAAAGCACCAGATCTTTCAGATAAG 59.626 38.462 0.00 0.00 34.53 1.73
2495 2696 6.149973 CACAAAGCACCAGATCTTTCAGATAA 59.850 38.462 0.00 0.00 34.53 1.75
2496 2697 5.645067 CACAAAGCACCAGATCTTTCAGATA 59.355 40.000 0.00 0.00 34.53 1.98
2497 2698 4.458295 CACAAAGCACCAGATCTTTCAGAT 59.542 41.667 0.00 0.00 37.73 2.90
2498 2699 3.817084 CACAAAGCACCAGATCTTTCAGA 59.183 43.478 0.00 0.00 30.79 3.27
2499 2700 3.057736 CCACAAAGCACCAGATCTTTCAG 60.058 47.826 0.00 0.00 30.79 3.02
2500 2701 2.886523 CCACAAAGCACCAGATCTTTCA 59.113 45.455 0.00 0.00 30.79 2.69
2501 2702 2.229784 CCCACAAAGCACCAGATCTTTC 59.770 50.000 0.00 0.00 30.79 2.62
2502 2703 2.242043 CCCACAAAGCACCAGATCTTT 58.758 47.619 0.00 0.00 33.20 2.52
2503 2704 1.145738 ACCCACAAAGCACCAGATCTT 59.854 47.619 0.00 0.00 0.00 2.40
2504 2705 0.773644 ACCCACAAAGCACCAGATCT 59.226 50.000 0.00 0.00 0.00 2.75
2505 2706 0.883833 CACCCACAAAGCACCAGATC 59.116 55.000 0.00 0.00 0.00 2.75
2506 2707 1.181098 GCACCCACAAAGCACCAGAT 61.181 55.000 0.00 0.00 0.00 2.90
2507 2708 1.827789 GCACCCACAAAGCACCAGA 60.828 57.895 0.00 0.00 0.00 3.86
2508 2709 2.730094 GCACCCACAAAGCACCAG 59.270 61.111 0.00 0.00 0.00 4.00
2509 2710 2.000825 TAGGCACCCACAAAGCACCA 62.001 55.000 0.00 0.00 0.00 4.17
2510 2711 1.228429 TAGGCACCCACAAAGCACC 60.228 57.895 0.00 0.00 0.00 5.01
2511 2712 1.244019 CCTAGGCACCCACAAAGCAC 61.244 60.000 0.00 0.00 0.00 4.40
2512 2713 1.074775 CCTAGGCACCCACAAAGCA 59.925 57.895 0.00 0.00 0.00 3.91
2513 2714 0.960861 GACCTAGGCACCCACAAAGC 60.961 60.000 9.30 0.00 0.00 3.51
2514 2715 0.693049 AGACCTAGGCACCCACAAAG 59.307 55.000 9.30 0.00 0.00 2.77
2515 2716 0.690762 GAGACCTAGGCACCCACAAA 59.309 55.000 9.30 0.00 0.00 2.83
2516 2717 0.472925 TGAGACCTAGGCACCCACAA 60.473 55.000 9.30 0.00 0.00 3.33
2517 2718 0.472925 TTGAGACCTAGGCACCCACA 60.473 55.000 9.30 0.00 0.00 4.17
2518 2719 0.036294 GTTGAGACCTAGGCACCCAC 60.036 60.000 9.30 0.00 0.00 4.61
2519 2720 0.178903 AGTTGAGACCTAGGCACCCA 60.179 55.000 9.30 0.00 0.00 4.51
2520 2721 0.250513 CAGTTGAGACCTAGGCACCC 59.749 60.000 9.30 0.00 0.00 4.61
2521 2722 1.066787 GTCAGTTGAGACCTAGGCACC 60.067 57.143 9.30 0.00 32.36 5.01
2522 2723 1.618837 TGTCAGTTGAGACCTAGGCAC 59.381 52.381 9.30 3.31 37.73 5.01
2523 2724 2.009681 TGTCAGTTGAGACCTAGGCA 57.990 50.000 9.30 0.00 37.73 4.75
2524 2725 3.402628 TTTGTCAGTTGAGACCTAGGC 57.597 47.619 9.30 1.39 37.73 3.93
2525 2726 4.020218 TCCATTTGTCAGTTGAGACCTAGG 60.020 45.833 7.41 7.41 37.73 3.02
2526 2727 5.152623 TCCATTTGTCAGTTGAGACCTAG 57.847 43.478 0.00 0.00 37.73 3.02
2527 2728 5.762179 ATCCATTTGTCAGTTGAGACCTA 57.238 39.130 0.00 0.00 37.73 3.08
2528 2729 4.647564 ATCCATTTGTCAGTTGAGACCT 57.352 40.909 0.00 0.00 37.73 3.85
2529 2730 4.082571 CCAATCCATTTGTCAGTTGAGACC 60.083 45.833 0.00 0.00 37.73 3.85
2530 2731 4.616835 GCCAATCCATTTGTCAGTTGAGAC 60.617 45.833 0.00 0.00 38.99 3.36
2531 2732 3.507233 GCCAATCCATTTGTCAGTTGAGA 59.493 43.478 0.00 0.00 33.15 3.27
2532 2733 3.671433 CGCCAATCCATTTGTCAGTTGAG 60.671 47.826 0.00 0.00 33.15 3.02
2533 2734 2.228582 CGCCAATCCATTTGTCAGTTGA 59.771 45.455 0.00 0.00 33.15 3.18
2534 2735 2.598589 CGCCAATCCATTTGTCAGTTG 58.401 47.619 0.00 0.00 33.15 3.16
2535 2736 1.067635 GCGCCAATCCATTTGTCAGTT 60.068 47.619 0.00 0.00 33.15 3.16
2536 2737 0.527565 GCGCCAATCCATTTGTCAGT 59.472 50.000 0.00 0.00 33.15 3.41
2537 2738 0.813184 AGCGCCAATCCATTTGTCAG 59.187 50.000 2.29 0.00 33.15 3.51
2538 2739 0.527113 CAGCGCCAATCCATTTGTCA 59.473 50.000 2.29 0.00 33.15 3.58
2539 2740 0.527565 ACAGCGCCAATCCATTTGTC 59.472 50.000 2.29 0.00 33.15 3.18
2540 2741 0.968405 AACAGCGCCAATCCATTTGT 59.032 45.000 2.29 0.00 33.15 2.83
2541 2742 2.937469 TAACAGCGCCAATCCATTTG 57.063 45.000 2.29 0.00 34.93 2.32
2542 2743 3.023119 TGATAACAGCGCCAATCCATTT 58.977 40.909 2.29 0.00 0.00 2.32
2543 2744 2.653726 TGATAACAGCGCCAATCCATT 58.346 42.857 2.29 0.00 0.00 3.16
2544 2745 2.346766 TGATAACAGCGCCAATCCAT 57.653 45.000 2.29 0.00 0.00 3.41
2545 2746 2.158769 AGATGATAACAGCGCCAATCCA 60.159 45.455 2.29 0.00 37.51 3.41
2546 2747 2.481952 GAGATGATAACAGCGCCAATCC 59.518 50.000 2.29 0.00 37.51 3.01
2547 2748 3.397482 AGAGATGATAACAGCGCCAATC 58.603 45.455 2.29 2.66 37.51 2.67
2548 2749 3.397482 GAGAGATGATAACAGCGCCAAT 58.603 45.455 2.29 0.00 37.51 3.16
2549 2750 2.483714 GGAGAGATGATAACAGCGCCAA 60.484 50.000 2.29 0.00 37.51 4.52
2550 2751 1.069204 GGAGAGATGATAACAGCGCCA 59.931 52.381 2.29 0.00 37.51 5.69
2551 2752 1.069204 TGGAGAGATGATAACAGCGCC 59.931 52.381 2.29 0.00 37.51 6.53
2552 2753 2.515926 TGGAGAGATGATAACAGCGC 57.484 50.000 0.00 0.00 37.51 5.92
2553 2754 3.806521 CCTTTGGAGAGATGATAACAGCG 59.193 47.826 0.00 0.00 37.51 5.18
2554 2755 3.563390 GCCTTTGGAGAGATGATAACAGC 59.437 47.826 0.00 0.00 0.00 4.40
2555 2756 4.133078 GGCCTTTGGAGAGATGATAACAG 58.867 47.826 0.00 0.00 0.00 3.16
2556 2757 3.117888 GGGCCTTTGGAGAGATGATAACA 60.118 47.826 0.84 0.00 0.00 2.41
2557 2758 3.117888 TGGGCCTTTGGAGAGATGATAAC 60.118 47.826 4.53 0.00 0.00 1.89
2558 2759 3.122480 TGGGCCTTTGGAGAGATGATAA 58.878 45.455 4.53 0.00 0.00 1.75
2559 2760 2.707791 CTGGGCCTTTGGAGAGATGATA 59.292 50.000 4.53 0.00 0.00 2.15
2560 2761 1.493871 CTGGGCCTTTGGAGAGATGAT 59.506 52.381 4.53 0.00 0.00 2.45
2561 2762 0.914644 CTGGGCCTTTGGAGAGATGA 59.085 55.000 4.53 0.00 0.00 2.92
2562 2763 0.750911 GCTGGGCCTTTGGAGAGATG 60.751 60.000 4.53 0.00 0.00 2.90
2563 2764 0.918310 AGCTGGGCCTTTGGAGAGAT 60.918 55.000 4.53 0.00 0.00 2.75
2564 2765 1.136329 AAGCTGGGCCTTTGGAGAGA 61.136 55.000 4.53 0.00 0.00 3.10
2565 2766 0.620556 TAAGCTGGGCCTTTGGAGAG 59.379 55.000 4.53 0.00 0.00 3.20
2566 2767 0.328258 GTAAGCTGGGCCTTTGGAGA 59.672 55.000 4.53 0.00 0.00 3.71
2567 2768 0.038166 TGTAAGCTGGGCCTTTGGAG 59.962 55.000 4.53 0.00 0.00 3.86
2568 2769 0.038166 CTGTAAGCTGGGCCTTTGGA 59.962 55.000 4.53 0.00 0.00 3.53
2569 2770 0.251341 ACTGTAAGCTGGGCCTTTGG 60.251 55.000 4.53 0.00 37.60 3.28
2570 2771 2.489938 TACTGTAAGCTGGGCCTTTG 57.510 50.000 4.53 0.00 37.60 2.77
2571 2772 3.621558 GATTACTGTAAGCTGGGCCTTT 58.378 45.455 4.53 0.00 37.60 3.11
2572 2773 2.420129 CGATTACTGTAAGCTGGGCCTT 60.420 50.000 13.24 0.00 37.60 4.35
2573 2774 1.139058 CGATTACTGTAAGCTGGGCCT 59.861 52.381 13.24 0.00 37.60 5.19
2574 2775 1.583054 CGATTACTGTAAGCTGGGCC 58.417 55.000 13.24 0.00 37.60 5.80
2575 2776 1.134491 ACCGATTACTGTAAGCTGGGC 60.134 52.381 21.49 0.00 37.60 5.36
2576 2777 2.936498 CAACCGATTACTGTAAGCTGGG 59.064 50.000 21.49 15.46 37.60 4.45
2577 2778 3.857052 TCAACCGATTACTGTAAGCTGG 58.143 45.455 18.29 18.29 37.60 4.85
2578 2779 4.744570 TCTCAACCGATTACTGTAAGCTG 58.255 43.478 13.24 9.51 37.60 4.24
2579 2780 5.401531 TTCTCAACCGATTACTGTAAGCT 57.598 39.130 13.24 0.00 37.60 3.74
2580 2781 6.663944 ATTTCTCAACCGATTACTGTAAGC 57.336 37.500 5.76 5.76 37.60 3.09
2581 2782 7.333423 TCCAATTTCTCAACCGATTACTGTAAG 59.667 37.037 6.40 0.00 42.29 2.34
2582 2783 7.162761 TCCAATTTCTCAACCGATTACTGTAA 58.837 34.615 2.26 2.26 0.00 2.41
2583 2784 6.703319 TCCAATTTCTCAACCGATTACTGTA 58.297 36.000 0.00 0.00 0.00 2.74
2584 2785 5.556915 TCCAATTTCTCAACCGATTACTGT 58.443 37.500 0.00 0.00 0.00 3.55
2585 2786 5.874810 TCTCCAATTTCTCAACCGATTACTG 59.125 40.000 0.00 0.00 0.00 2.74
2586 2787 6.049955 TCTCCAATTTCTCAACCGATTACT 57.950 37.500 0.00 0.00 0.00 2.24
2587 2788 6.927294 ATCTCCAATTTCTCAACCGATTAC 57.073 37.500 0.00 0.00 0.00 1.89
2588 2789 7.715249 CCTAATCTCCAATTTCTCAACCGATTA 59.285 37.037 0.00 0.00 0.00 1.75
2589 2790 6.543831 CCTAATCTCCAATTTCTCAACCGATT 59.456 38.462 0.00 0.00 0.00 3.34
2590 2791 6.058183 CCTAATCTCCAATTTCTCAACCGAT 58.942 40.000 0.00 0.00 0.00 4.18
2591 2792 5.188948 TCCTAATCTCCAATTTCTCAACCGA 59.811 40.000 0.00 0.00 0.00 4.69
2592 2793 5.428253 TCCTAATCTCCAATTTCTCAACCG 58.572 41.667 0.00 0.00 0.00 4.44
2593 2794 7.888250 ATTCCTAATCTCCAATTTCTCAACC 57.112 36.000 0.00 0.00 0.00 3.77
2596 2797 9.532494 TGAAAATTCCTAATCTCCAATTTCTCA 57.468 29.630 0.00 0.00 29.99 3.27
2602 2803 9.539194 AGACTTTGAAAATTCCTAATCTCCAAT 57.461 29.630 0.00 0.00 0.00 3.16
2603 2804 8.940397 AGACTTTGAAAATTCCTAATCTCCAA 57.060 30.769 0.00 0.00 0.00 3.53
2604 2805 9.672673 CTAGACTTTGAAAATTCCTAATCTCCA 57.327 33.333 0.00 0.00 0.00 3.86
2605 2806 9.674068 ACTAGACTTTGAAAATTCCTAATCTCC 57.326 33.333 0.00 0.00 0.00 3.71
2611 2812 9.847224 ACTGAAACTAGACTTTGAAAATTCCTA 57.153 29.630 0.00 0.00 0.00 2.94
2612 2813 8.753497 ACTGAAACTAGACTTTGAAAATTCCT 57.247 30.769 0.00 0.00 0.00 3.36
2613 2814 9.237846 CAACTGAAACTAGACTTTGAAAATTCC 57.762 33.333 0.00 0.00 0.00 3.01
2614 2815 9.237846 CCAACTGAAACTAGACTTTGAAAATTC 57.762 33.333 0.00 0.00 0.00 2.17
2615 2816 8.749354 ACCAACTGAAACTAGACTTTGAAAATT 58.251 29.630 0.00 0.00 0.00 1.82
2616 2817 8.190784 CACCAACTGAAACTAGACTTTGAAAAT 58.809 33.333 0.00 0.00 0.00 1.82
2617 2818 7.535139 CACCAACTGAAACTAGACTTTGAAAA 58.465 34.615 0.00 0.00 0.00 2.29
2618 2819 6.404293 GCACCAACTGAAACTAGACTTTGAAA 60.404 38.462 0.00 0.00 0.00 2.69
2619 2820 5.065988 GCACCAACTGAAACTAGACTTTGAA 59.934 40.000 0.00 0.00 0.00 2.69
2620 2821 4.574828 GCACCAACTGAAACTAGACTTTGA 59.425 41.667 0.00 0.00 0.00 2.69
2621 2822 4.576463 AGCACCAACTGAAACTAGACTTTG 59.424 41.667 0.00 0.00 0.00 2.77
2622 2823 4.781934 AGCACCAACTGAAACTAGACTTT 58.218 39.130 0.00 0.00 0.00 2.66
2623 2824 4.381411 GAGCACCAACTGAAACTAGACTT 58.619 43.478 0.00 0.00 0.00 3.01
2624 2825 3.244249 GGAGCACCAACTGAAACTAGACT 60.244 47.826 0.00 0.00 35.97 3.24
2625 2826 3.067833 GGAGCACCAACTGAAACTAGAC 58.932 50.000 0.00 0.00 35.97 2.59
2626 2827 2.703536 TGGAGCACCAACTGAAACTAGA 59.296 45.455 0.00 0.00 43.91 2.43
2627 2828 3.126001 TGGAGCACCAACTGAAACTAG 57.874 47.619 0.00 0.00 43.91 2.57
2638 2839 1.108727 CAACTGCCTTTGGAGCACCA 61.109 55.000 0.00 0.00 45.34 4.17
2639 2840 0.823356 TCAACTGCCTTTGGAGCACC 60.823 55.000 0.00 0.00 36.01 5.01
2640 2841 1.032014 TTCAACTGCCTTTGGAGCAC 58.968 50.000 0.00 0.00 36.01 4.40
2641 2842 1.999648 ATTCAACTGCCTTTGGAGCA 58.000 45.000 0.00 0.00 38.82 4.26
2642 2843 4.519540 TTTATTCAACTGCCTTTGGAGC 57.480 40.909 0.00 0.00 0.00 4.70
2670 2871 9.607988 TGAACAATCGTATATCAACACCTTATT 57.392 29.630 0.00 0.00 0.00 1.40
2671 2872 9.607988 TTGAACAATCGTATATCAACACCTTAT 57.392 29.630 0.00 0.00 0.00 1.73
2672 2873 9.438228 TTTGAACAATCGTATATCAACACCTTA 57.562 29.630 0.00 0.00 30.34 2.69
2673 2874 7.915293 TTGAACAATCGTATATCAACACCTT 57.085 32.000 0.00 0.00 0.00 3.50
2674 2875 7.606456 ACTTTGAACAATCGTATATCAACACCT 59.394 33.333 0.00 0.00 30.34 4.00
2675 2876 7.748847 ACTTTGAACAATCGTATATCAACACC 58.251 34.615 0.00 0.00 30.34 4.16
2684 2885 8.021396 GCTTCCTTTAACTTTGAACAATCGTAT 58.979 33.333 0.00 0.00 0.00 3.06
2685 2886 7.357303 GCTTCCTTTAACTTTGAACAATCGTA 58.643 34.615 0.00 0.00 0.00 3.43
2686 2887 6.206498 GCTTCCTTTAACTTTGAACAATCGT 58.794 36.000 0.00 0.00 0.00 3.73
2687 2888 5.339611 CGCTTCCTTTAACTTTGAACAATCG 59.660 40.000 0.00 0.00 0.00 3.34
2688 2889 5.629435 CCGCTTCCTTTAACTTTGAACAATC 59.371 40.000 0.00 0.00 0.00 2.67
2689 2890 5.300792 TCCGCTTCCTTTAACTTTGAACAAT 59.699 36.000 0.00 0.00 0.00 2.71
2690 2891 4.641094 TCCGCTTCCTTTAACTTTGAACAA 59.359 37.500 0.00 0.00 0.00 2.83
2691 2892 4.200874 TCCGCTTCCTTTAACTTTGAACA 58.799 39.130 0.00 0.00 0.00 3.18
2692 2893 4.823790 TCCGCTTCCTTTAACTTTGAAC 57.176 40.909 0.00 0.00 0.00 3.18
2693 2894 5.067273 TCATCCGCTTCCTTTAACTTTGAA 58.933 37.500 0.00 0.00 0.00 2.69
2694 2895 4.647611 TCATCCGCTTCCTTTAACTTTGA 58.352 39.130 0.00 0.00 0.00 2.69
2695 2896 4.695455 TCTCATCCGCTTCCTTTAACTTTG 59.305 41.667 0.00 0.00 0.00 2.77
2696 2897 4.906618 TCTCATCCGCTTCCTTTAACTTT 58.093 39.130 0.00 0.00 0.00 2.66
2697 2898 4.553330 TCTCATCCGCTTCCTTTAACTT 57.447 40.909 0.00 0.00 0.00 2.66
2698 2899 4.162320 TGATCTCATCCGCTTCCTTTAACT 59.838 41.667 0.00 0.00 0.00 2.24
2699 2900 4.442706 TGATCTCATCCGCTTCCTTTAAC 58.557 43.478 0.00 0.00 0.00 2.01
2700 2901 4.753516 TGATCTCATCCGCTTCCTTTAA 57.246 40.909 0.00 0.00 0.00 1.52
2701 2902 4.753516 TTGATCTCATCCGCTTCCTTTA 57.246 40.909 0.00 0.00 0.00 1.85
2702 2903 3.634397 TTGATCTCATCCGCTTCCTTT 57.366 42.857 0.00 0.00 0.00 3.11
2703 2904 3.853355 ATTGATCTCATCCGCTTCCTT 57.147 42.857 0.00 0.00 0.00 3.36
2704 2905 4.155709 TCTATTGATCTCATCCGCTTCCT 58.844 43.478 0.00 0.00 0.00 3.36
2705 2906 4.527509 TCTATTGATCTCATCCGCTTCC 57.472 45.455 0.00 0.00 0.00 3.46
2706 2907 5.777802 TCTTCTATTGATCTCATCCGCTTC 58.222 41.667 0.00 0.00 0.00 3.86
2707 2908 5.798125 TCTTCTATTGATCTCATCCGCTT 57.202 39.130 0.00 0.00 0.00 4.68
2708 2909 5.105392 GGATCTTCTATTGATCTCATCCGCT 60.105 44.000 0.00 0.00 39.95 5.52
2709 2910 5.108517 GGATCTTCTATTGATCTCATCCGC 58.891 45.833 0.00 0.00 39.95 5.54
2710 2911 5.659463 GGGATCTTCTATTGATCTCATCCG 58.341 45.833 0.00 0.00 40.24 4.18
2711 2912 5.659463 CGGGATCTTCTATTGATCTCATCC 58.341 45.833 0.00 0.00 40.45 3.51
2712 2913 5.108517 GCGGGATCTTCTATTGATCTCATC 58.891 45.833 0.00 0.00 40.45 2.92
2713 2914 4.081198 GGCGGGATCTTCTATTGATCTCAT 60.081 45.833 0.00 0.00 40.45 2.90
2714 2915 3.259374 GGCGGGATCTTCTATTGATCTCA 59.741 47.826 0.00 0.00 40.45 3.27
2715 2916 3.513515 AGGCGGGATCTTCTATTGATCTC 59.486 47.826 0.00 0.00 39.95 2.75
2716 2917 3.515562 AGGCGGGATCTTCTATTGATCT 58.484 45.455 0.00 0.00 39.95 2.75
2717 2918 3.971245 AGGCGGGATCTTCTATTGATC 57.029 47.619 0.00 0.00 39.49 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.