Multiple sequence alignment - TraesCS2B01G623500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G623500 chr2B 100.000 3587 0 0 1 3587 797197132 797200718 0.000000e+00 6625.0
1 TraesCS2B01G623500 chr2B 96.914 1361 30 10 2235 3587 797252277 797253633 0.000000e+00 2270.0
2 TraesCS2B01G623500 chr2B 78.715 249 29 15 2239 2469 797256131 797256373 1.040000e-30 145.0
3 TraesCS2B01G623500 chr2B 72.922 421 79 28 2072 2480 796165240 796165637 2.930000e-21 113.0
4 TraesCS2B01G623500 chr2D 95.984 996 38 2 1696 2690 638330146 638331140 0.000000e+00 1616.0
5 TraesCS2B01G623500 chr2D 95.067 892 30 9 2699 3585 638331120 638332002 0.000000e+00 1391.0
6 TraesCS2B01G623500 chr2D 90.058 865 66 12 327 1186 638328880 638329729 0.000000e+00 1103.0
7 TraesCS2B01G623500 chr2D 75.885 904 162 36 1584 2469 637354047 637353182 9.270000e-111 411.0
8 TraesCS2B01G623500 chr2D 75.474 844 163 35 1646 2469 636946697 636945878 4.370000e-99 372.0
9 TraesCS2B01G623500 chr2D 80.493 446 58 13 2220 2643 638314511 638314949 7.480000e-82 315.0
10 TraesCS2B01G623500 chr2D 73.419 854 171 46 1643 2480 636923070 636922257 5.900000e-68 268.0
11 TraesCS2B01G623500 chr2D 87.500 208 16 6 107 307 638328691 638328895 7.740000e-57 231.0
12 TraesCS2B01G623500 chr2D 96.296 135 5 0 1567 1701 638329722 638329856 4.660000e-54 222.0
13 TraesCS2B01G623500 chr2D 74.528 530 111 12 1949 2469 637345394 637344880 3.630000e-50 209.0
14 TraesCS2B01G623500 chr2D 89.744 78 8 0 1662 1739 636728332 636728255 2.280000e-17 100.0
15 TraesCS2B01G623500 chr2A 93.236 887 45 8 2710 3585 763970752 763969870 0.000000e+00 1291.0
16 TraesCS2B01G623500 chr2A 93.848 699 42 1 2020 2717 763974273 763973575 0.000000e+00 1051.0
17 TraesCS2B01G623500 chr2A 90.099 505 37 13 327 825 763975797 763975300 0.000000e+00 643.0
18 TraesCS2B01G623500 chr2A 92.233 412 20 2 1567 1978 763974941 763974542 1.120000e-159 573.0
19 TraesCS2B01G623500 chr2A 91.645 383 29 2 1184 1566 23866689 23866310 8.820000e-146 527.0
20 TraesCS2B01G623500 chr2A 75.658 912 180 29 1566 2469 762660159 762661036 1.990000e-112 416.0
21 TraesCS2B01G623500 chr2A 89.855 207 12 4 107 307 763975985 763975782 1.280000e-64 257.0
22 TraesCS2B01G623500 chr2A 87.845 181 21 1 1006 1185 763975115 763974935 1.010000e-50 211.0
23 TraesCS2B01G623500 chr6B 95.000 380 17 2 1187 1566 35836169 35836546 2.380000e-166 595.0
24 TraesCS2B01G623500 chr3D 94.271 384 22 0 1183 1566 6135863 6135480 3.990000e-164 588.0
25 TraesCS2B01G623500 chr3D 92.105 380 29 1 1187 1566 577423299 577422921 5.270000e-148 534.0
26 TraesCS2B01G623500 chr3D 99.057 106 1 0 1 106 581569079 581568974 1.310000e-44 191.0
27 TraesCS2B01G623500 chr3B 93.158 380 24 2 1187 1566 829045593 829045970 1.130000e-154 556.0
28 TraesCS2B01G623500 chr4A 91.710 386 30 2 1182 1566 36409158 36409542 5.270000e-148 534.0
29 TraesCS2B01G623500 chr4A 72.340 846 195 30 1643 2480 699189115 699188301 2.790000e-56 230.0
30 TraesCS2B01G623500 chr4A 100.000 106 0 0 1 106 584684386 584684281 2.830000e-46 196.0
31 TraesCS2B01G623500 chr4A 100.000 106 0 0 1 106 584730536 584730641 2.830000e-46 196.0
32 TraesCS2B01G623500 chr5D 91.864 381 28 3 1186 1566 17822526 17822149 2.450000e-146 529.0
33 TraesCS2B01G623500 chr5D 97.196 107 3 0 1 107 345173280 345173386 7.910000e-42 182.0
34 TraesCS2B01G623500 chr5D 97.170 106 3 0 1 106 489009722 489009617 2.850000e-41 180.0
35 TraesCS2B01G623500 chr7B 91.623 382 31 1 1185 1566 675829108 675828728 8.820000e-146 527.0
36 TraesCS2B01G623500 chr7B 96.154 104 4 0 3 106 726720380 726720277 1.710000e-38 171.0
37 TraesCS2B01G623500 chr6A 91.623 382 31 1 1186 1567 606710797 606710417 8.820000e-146 527.0
38 TraesCS2B01G623500 chr6A 99.057 106 1 0 1 106 486975681 486975786 1.310000e-44 191.0
39 TraesCS2B01G623500 chrUn 98.195 277 4 1 2238 2514 361191635 361191360 1.940000e-132 483.0
40 TraesCS2B01G623500 chrUn 98.195 277 4 1 2238 2514 428808094 428807819 1.940000e-132 483.0
41 TraesCS2B01G623500 chrUn 100.000 106 0 0 1 106 478084442 478084547 2.830000e-46 196.0
42 TraesCS2B01G623500 chr7D 72.434 838 184 34 1643 2469 29984635 29985436 1.300000e-54 224.0
43 TraesCS2B01G623500 chr7A 99.057 106 1 0 1 106 646843711 646843606 1.310000e-44 191.0
44 TraesCS2B01G623500 chr7A 74.897 486 84 25 1996 2469 439730414 439730873 1.700000e-43 187.0
45 TraesCS2B01G623500 chr7A 89.189 74 8 0 1663 1736 30240783 30240856 3.810000e-15 93.5
46 TraesCS2B01G623500 chr7A 94.872 39 2 0 3187 3225 652701848 652701810 1.080000e-05 62.1
47 TraesCS2B01G623500 chr4B 78.241 216 39 3 1569 1783 673253857 673253649 8.080000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G623500 chr2B 797197132 797200718 3586 False 6625.0 6625 100.0000 1 3587 1 chr2B.!!$F2 3586
1 TraesCS2B01G623500 chr2B 797252277 797256373 4096 False 1207.5 2270 87.8145 2235 3587 2 chr2B.!!$F3 1352
2 TraesCS2B01G623500 chr2D 638328691 638332002 3311 False 912.6 1616 92.9810 107 3585 5 chr2D.!!$F2 3478
3 TraesCS2B01G623500 chr2D 637353182 637354047 865 True 411.0 411 75.8850 1584 2469 1 chr2D.!!$R5 885
4 TraesCS2B01G623500 chr2D 636945878 636946697 819 True 372.0 372 75.4740 1646 2469 1 chr2D.!!$R3 823
5 TraesCS2B01G623500 chr2D 636922257 636923070 813 True 268.0 268 73.4190 1643 2480 1 chr2D.!!$R2 837
6 TraesCS2B01G623500 chr2D 637344880 637345394 514 True 209.0 209 74.5280 1949 2469 1 chr2D.!!$R4 520
7 TraesCS2B01G623500 chr2A 763969870 763975985 6115 True 671.0 1291 91.1860 107 3585 6 chr2A.!!$R2 3478
8 TraesCS2B01G623500 chr2A 762660159 762661036 877 False 416.0 416 75.6580 1566 2469 1 chr2A.!!$F1 903
9 TraesCS2B01G623500 chr4A 699188301 699189115 814 True 230.0 230 72.3400 1643 2480 1 chr4A.!!$R2 837
10 TraesCS2B01G623500 chr7D 29984635 29985436 801 False 224.0 224 72.4340 1643 2469 1 chr7D.!!$F1 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
310 318 0.380378 ACGATGCGTTTGTTGCAAGT 59.620 45.0 0.00 0.00 46.87 3.16 F
1534 1606 0.034863 ACGCGGTAACCATGGGAAAT 60.035 50.0 18.09 1.59 0.00 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1558 1630 0.034477 CTGTATCCGGGGCAAGGTTT 60.034 55.0 0.0 0.0 0.0 3.27 R
3234 10606 0.597377 CAAGCGGCCCAAAGAAACAC 60.597 55.0 0.0 0.0 0.0 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.066614 GCAGTCCCCTCCACCATA 57.933 61.111 0.00 0.00 0.00 2.74
18 19 2.307153 GCAGTCCCCTCCACCATAA 58.693 57.895 0.00 0.00 0.00 1.90
19 20 0.846693 GCAGTCCCCTCCACCATAAT 59.153 55.000 0.00 0.00 0.00 1.28
20 21 1.202818 GCAGTCCCCTCCACCATAATC 60.203 57.143 0.00 0.00 0.00 1.75
21 22 2.412591 CAGTCCCCTCCACCATAATCT 58.587 52.381 0.00 0.00 0.00 2.40
22 23 2.105477 CAGTCCCCTCCACCATAATCTG 59.895 54.545 0.00 0.00 0.00 2.90
23 24 2.127708 GTCCCCTCCACCATAATCTGT 58.872 52.381 0.00 0.00 0.00 3.41
24 25 2.126882 TCCCCTCCACCATAATCTGTG 58.873 52.381 0.00 0.00 0.00 3.66
25 26 1.477558 CCCCTCCACCATAATCTGTGC 60.478 57.143 0.00 0.00 0.00 4.57
26 27 1.477558 CCCTCCACCATAATCTGTGCC 60.478 57.143 0.00 0.00 0.00 5.01
27 28 1.212688 CCTCCACCATAATCTGTGCCA 59.787 52.381 0.00 0.00 0.00 4.92
28 29 2.158564 CCTCCACCATAATCTGTGCCAT 60.159 50.000 0.00 0.00 0.00 4.40
29 30 3.559069 CTCCACCATAATCTGTGCCATT 58.441 45.455 0.00 0.00 0.00 3.16
30 31 3.554934 TCCACCATAATCTGTGCCATTC 58.445 45.455 0.00 0.00 0.00 2.67
31 32 3.053768 TCCACCATAATCTGTGCCATTCA 60.054 43.478 0.00 0.00 0.00 2.57
32 33 3.893200 CCACCATAATCTGTGCCATTCAT 59.107 43.478 0.00 0.00 0.00 2.57
33 34 4.022589 CCACCATAATCTGTGCCATTCATC 60.023 45.833 0.00 0.00 0.00 2.92
34 35 4.825634 CACCATAATCTGTGCCATTCATCT 59.174 41.667 0.00 0.00 0.00 2.90
35 36 5.048921 CACCATAATCTGTGCCATTCATCTC 60.049 44.000 0.00 0.00 0.00 2.75
36 37 4.458295 CCATAATCTGTGCCATTCATCTCC 59.542 45.833 0.00 0.00 0.00 3.71
37 38 2.653234 ATCTGTGCCATTCATCTCCC 57.347 50.000 0.00 0.00 0.00 4.30
38 39 1.288188 TCTGTGCCATTCATCTCCCA 58.712 50.000 0.00 0.00 0.00 4.37
39 40 1.848388 TCTGTGCCATTCATCTCCCAT 59.152 47.619 0.00 0.00 0.00 4.00
40 41 2.158711 TCTGTGCCATTCATCTCCCATC 60.159 50.000 0.00 0.00 0.00 3.51
41 42 1.133699 TGTGCCATTCATCTCCCATCC 60.134 52.381 0.00 0.00 0.00 3.51
42 43 1.133699 GTGCCATTCATCTCCCATCCA 60.134 52.381 0.00 0.00 0.00 3.41
43 44 1.570024 TGCCATTCATCTCCCATCCAA 59.430 47.619 0.00 0.00 0.00 3.53
44 45 2.178325 TGCCATTCATCTCCCATCCAAT 59.822 45.455 0.00 0.00 0.00 3.16
45 46 2.561419 GCCATTCATCTCCCATCCAATG 59.439 50.000 0.00 0.00 0.00 2.82
57 58 3.293337 CCATCCAATGGCTCAGATTTCA 58.707 45.455 0.00 0.00 44.70 2.69
58 59 3.895656 CCATCCAATGGCTCAGATTTCAT 59.104 43.478 0.00 0.00 44.70 2.57
59 60 4.344102 CCATCCAATGGCTCAGATTTCATT 59.656 41.667 0.00 0.00 44.70 2.57
60 61 5.163343 CCATCCAATGGCTCAGATTTCATTT 60.163 40.000 0.00 0.00 44.70 2.32
61 62 6.346096 CATCCAATGGCTCAGATTTCATTTT 58.654 36.000 0.00 0.00 0.00 1.82
62 63 6.363167 TCCAATGGCTCAGATTTCATTTTT 57.637 33.333 0.00 0.00 0.00 1.94
63 64 6.400568 TCCAATGGCTCAGATTTCATTTTTC 58.599 36.000 0.00 0.00 0.00 2.29
64 65 6.211986 TCCAATGGCTCAGATTTCATTTTTCT 59.788 34.615 0.00 0.00 0.00 2.52
65 66 7.396907 TCCAATGGCTCAGATTTCATTTTTCTA 59.603 33.333 0.00 0.00 0.00 2.10
66 67 8.202137 CCAATGGCTCAGATTTCATTTTTCTAT 58.798 33.333 0.00 0.00 0.00 1.98
67 68 9.595823 CAATGGCTCAGATTTCATTTTTCTATT 57.404 29.630 0.00 0.00 0.00 1.73
68 69 9.813446 AATGGCTCAGATTTCATTTTTCTATTC 57.187 29.630 0.00 0.00 0.00 1.75
69 70 8.585471 TGGCTCAGATTTCATTTTTCTATTCT 57.415 30.769 0.00 0.00 0.00 2.40
70 71 9.028284 TGGCTCAGATTTCATTTTTCTATTCTT 57.972 29.630 0.00 0.00 0.00 2.52
71 72 9.866798 GGCTCAGATTTCATTTTTCTATTCTTT 57.133 29.630 0.00 0.00 0.00 2.52
81 82 9.630098 TCATTTTTCTATTCTTTCACATGAAGC 57.370 29.630 0.00 0.00 35.21 3.86
82 83 9.635520 CATTTTTCTATTCTTTCACATGAAGCT 57.364 29.630 0.00 0.00 35.21 3.74
83 84 9.852091 ATTTTTCTATTCTTTCACATGAAGCTC 57.148 29.630 0.00 0.00 35.21 4.09
84 85 7.984422 TTTCTATTCTTTCACATGAAGCTCA 57.016 32.000 0.00 0.00 35.21 4.26
85 86 7.606858 TTCTATTCTTTCACATGAAGCTCAG 57.393 36.000 0.00 0.00 35.21 3.35
86 87 6.939622 TCTATTCTTTCACATGAAGCTCAGA 58.060 36.000 0.00 0.00 35.21 3.27
87 88 7.563020 TCTATTCTTTCACATGAAGCTCAGAT 58.437 34.615 0.00 0.00 35.21 2.90
88 89 8.045507 TCTATTCTTTCACATGAAGCTCAGATT 58.954 33.333 0.00 0.00 35.21 2.40
89 90 6.492007 TTCTTTCACATGAAGCTCAGATTC 57.508 37.500 0.00 0.00 35.21 2.52
90 91 5.802465 TCTTTCACATGAAGCTCAGATTCT 58.198 37.500 3.92 0.00 35.21 2.40
91 92 6.939622 TCTTTCACATGAAGCTCAGATTCTA 58.060 36.000 3.92 0.00 35.21 2.10
92 93 7.563020 TCTTTCACATGAAGCTCAGATTCTAT 58.437 34.615 3.92 0.00 35.21 1.98
93 94 8.699130 TCTTTCACATGAAGCTCAGATTCTATA 58.301 33.333 3.92 0.00 35.21 1.31
94 95 8.654230 TTTCACATGAAGCTCAGATTCTATAC 57.346 34.615 3.92 0.00 35.21 1.47
95 96 7.594351 TCACATGAAGCTCAGATTCTATACT 57.406 36.000 3.92 0.00 0.00 2.12
96 97 8.697507 TCACATGAAGCTCAGATTCTATACTA 57.302 34.615 3.92 0.00 0.00 1.82
97 98 8.791675 TCACATGAAGCTCAGATTCTATACTAG 58.208 37.037 3.92 0.00 0.00 2.57
98 99 8.575589 CACATGAAGCTCAGATTCTATACTAGT 58.424 37.037 3.92 0.00 0.00 2.57
99 100 9.142014 ACATGAAGCTCAGATTCTATACTAGTT 57.858 33.333 3.92 0.00 0.00 2.24
100 101 9.409312 CATGAAGCTCAGATTCTATACTAGTTG 57.591 37.037 3.92 0.00 0.00 3.16
101 102 7.429633 TGAAGCTCAGATTCTATACTAGTTGC 58.570 38.462 3.92 0.00 0.00 4.17
102 103 7.286546 TGAAGCTCAGATTCTATACTAGTTGCT 59.713 37.037 3.92 0.00 0.00 3.91
103 104 7.214467 AGCTCAGATTCTATACTAGTTGCTC 57.786 40.000 0.00 0.00 0.00 4.26
104 105 6.208599 AGCTCAGATTCTATACTAGTTGCTCC 59.791 42.308 0.00 0.00 0.00 4.70
105 106 6.571537 GCTCAGATTCTATACTAGTTGCTCCC 60.572 46.154 0.00 0.00 0.00 4.30
125 126 4.819630 TCCCGAAATAACATGGATACTTGC 59.180 41.667 0.00 0.00 45.21 4.01
154 155 8.910666 TCAATACATGTGAAAAGCAAAATAACG 58.089 29.630 9.11 0.00 0.00 3.18
179 180 6.650427 AGACAAAGGTAAAAACCAAGATCC 57.350 37.500 0.00 0.00 0.00 3.36
253 261 5.995282 TGACGTGAACAGGTAGATTTGATTT 59.005 36.000 0.00 0.00 0.00 2.17
254 262 6.485313 TGACGTGAACAGGTAGATTTGATTTT 59.515 34.615 0.00 0.00 0.00 1.82
255 263 6.668323 ACGTGAACAGGTAGATTTGATTTTG 58.332 36.000 0.00 0.00 0.00 2.44
287 295 8.598041 ACTGTTTCTAATATCTCTCCAAACTGT 58.402 33.333 0.00 0.00 32.74 3.55
296 304 9.698309 AATATCTCTCCAAACTGTATTACGATG 57.302 33.333 0.00 0.00 0.00 3.84
297 305 5.348986 TCTCTCCAAACTGTATTACGATGC 58.651 41.667 0.00 0.00 0.00 3.91
298 306 4.109766 TCTCCAAACTGTATTACGATGCG 58.890 43.478 0.00 0.00 0.00 4.73
299 307 3.852286 TCCAAACTGTATTACGATGCGT 58.148 40.909 0.00 0.00 44.35 5.24
300 308 4.247258 TCCAAACTGTATTACGATGCGTT 58.753 39.130 0.00 0.00 41.54 4.84
301 309 4.691685 TCCAAACTGTATTACGATGCGTTT 59.308 37.500 0.00 0.00 41.54 3.60
302 310 4.786068 CCAAACTGTATTACGATGCGTTTG 59.214 41.667 0.00 0.00 41.54 2.93
303 311 5.379003 CAAACTGTATTACGATGCGTTTGT 58.621 37.500 0.00 0.00 41.54 2.83
304 312 5.600908 AACTGTATTACGATGCGTTTGTT 57.399 34.783 0.00 0.00 41.54 2.83
305 313 4.953269 ACTGTATTACGATGCGTTTGTTG 58.047 39.130 0.00 0.00 41.54 3.33
306 314 3.738399 TGTATTACGATGCGTTTGTTGC 58.262 40.909 0.00 0.00 41.54 4.17
308 316 2.757686 TTACGATGCGTTTGTTGCAA 57.242 40.000 0.00 0.00 46.87 4.08
309 317 2.308347 TACGATGCGTTTGTTGCAAG 57.692 45.000 0.00 0.00 46.87 4.01
310 318 0.380378 ACGATGCGTTTGTTGCAAGT 59.620 45.000 0.00 0.00 46.87 3.16
311 319 1.202245 ACGATGCGTTTGTTGCAAGTT 60.202 42.857 0.00 0.00 46.87 2.66
312 320 1.447938 CGATGCGTTTGTTGCAAGTTC 59.552 47.619 0.00 0.00 46.87 3.01
313 321 2.458951 GATGCGTTTGTTGCAAGTTCA 58.541 42.857 0.00 0.00 46.87 3.18
314 322 2.354109 TGCGTTTGTTGCAAGTTCAA 57.646 40.000 0.00 0.00 39.87 2.69
315 323 2.677199 TGCGTTTGTTGCAAGTTCAAA 58.323 38.095 0.00 4.35 39.87 2.69
316 324 3.059884 TGCGTTTGTTGCAAGTTCAAAA 58.940 36.364 13.43 2.27 39.87 2.44
317 325 3.494626 TGCGTTTGTTGCAAGTTCAAAAA 59.505 34.783 13.43 3.02 39.87 1.94
343 351 1.509787 CAAGATGCGTTCGTTGCGG 60.510 57.895 0.00 0.00 34.24 5.69
380 388 3.462982 TGCCATGTGACCATTACGTATC 58.537 45.455 0.00 0.00 0.00 2.24
487 496 9.651913 GCCATGATTTAGGAAATTTAGTTTTCA 57.348 29.630 0.00 0.00 37.34 2.69
562 576 2.753452 TCCTACGATCAGTCTTGTCACC 59.247 50.000 0.00 0.00 0.00 4.02
566 580 3.162666 ACGATCAGTCTTGTCACCCTAA 58.837 45.455 0.00 0.00 0.00 2.69
572 586 5.502079 TCAGTCTTGTCACCCTAAAAACAA 58.498 37.500 0.00 0.00 0.00 2.83
608 622 1.396301 CATGCTCTTGAAGGACGAAGC 59.604 52.381 0.00 0.00 0.00 3.86
640 654 3.939592 TGTCGTGTGACCAAATACAACAA 59.060 39.130 0.00 0.00 44.86 2.83
674 688 8.761575 AAATTTGCGATGATTTAAGACACAAT 57.238 26.923 0.00 0.00 0.00 2.71
721 735 9.768662 ATTGTATAATTTTGCCATGATCTTTCC 57.231 29.630 0.00 0.00 0.00 3.13
730 745 3.007831 GCCATGATCTTTCCACCCAAAAA 59.992 43.478 0.00 0.00 0.00 1.94
779 794 3.113979 GGCGCAACAATGGCAAGC 61.114 61.111 10.83 0.00 0.00 4.01
796 811 3.983344 GCAAGCTCATTGTTTTGTCGATT 59.017 39.130 0.00 0.00 41.29 3.34
817 832 7.043059 TCGATTGCAACCTTTTTGTATGTTTTC 60.043 33.333 0.00 0.00 0.00 2.29
856 926 2.206576 AGGTGCAGATCCCAGTTTTC 57.793 50.000 0.00 0.00 0.00 2.29
857 927 1.177401 GGTGCAGATCCCAGTTTTCC 58.823 55.000 0.00 0.00 0.00 3.13
858 928 1.272147 GGTGCAGATCCCAGTTTTCCT 60.272 52.381 0.00 0.00 0.00 3.36
890 962 4.437390 GCGTGTCACAGGAAATCTTATTGG 60.437 45.833 0.46 0.00 0.00 3.16
1102 1174 2.442272 GCCTCCTAGACCGCCTCA 60.442 66.667 0.00 0.00 0.00 3.86
1110 1182 4.070552 GACCGCCTCACCTTCGCT 62.071 66.667 0.00 0.00 0.00 4.93
1121 1193 3.494336 CTTCGCTGCAGCCTTCCG 61.494 66.667 32.07 18.05 37.91 4.30
1173 1245 2.595463 TGTCTCGTCGTTCCCGGT 60.595 61.111 0.00 0.00 33.95 5.28
1187 1259 3.387091 CGGTGACACCCCGGATCA 61.387 66.667 19.11 0.00 41.78 2.92
1188 1260 2.949909 CGGTGACACCCCGGATCAA 61.950 63.158 19.11 0.00 41.78 2.57
1189 1261 1.078426 GGTGACACCCCGGATCAAG 60.078 63.158 14.16 0.00 30.04 3.02
1190 1262 1.078426 GTGACACCCCGGATCAAGG 60.078 63.158 0.73 0.00 0.00 3.61
1191 1263 1.537889 TGACACCCCGGATCAAGGT 60.538 57.895 0.73 0.00 0.00 3.50
1192 1264 1.131303 TGACACCCCGGATCAAGGTT 61.131 55.000 0.73 0.00 0.00 3.50
1193 1265 0.037734 GACACCCCGGATCAAGGTTT 59.962 55.000 0.73 0.00 0.00 3.27
1194 1266 0.481128 ACACCCCGGATCAAGGTTTT 59.519 50.000 0.73 0.00 0.00 2.43
1195 1267 0.887933 CACCCCGGATCAAGGTTTTG 59.112 55.000 0.73 0.00 35.57 2.44
1196 1268 0.251608 ACCCCGGATCAAGGTTTTGG 60.252 55.000 0.73 0.00 34.97 3.28
1197 1269 0.251608 CCCCGGATCAAGGTTTTGGT 60.252 55.000 0.73 0.00 34.97 3.67
1198 1270 1.627864 CCCGGATCAAGGTTTTGGTT 58.372 50.000 0.73 0.00 34.97 3.67
1199 1271 2.555670 CCCCGGATCAAGGTTTTGGTTA 60.556 50.000 0.73 0.00 34.97 2.85
1200 1272 2.490509 CCCGGATCAAGGTTTTGGTTAC 59.509 50.000 0.73 0.00 34.97 2.50
1201 1273 2.490509 CCGGATCAAGGTTTTGGTTACC 59.509 50.000 0.00 0.00 34.97 2.85
1202 1274 2.160813 CGGATCAAGGTTTTGGTTACCG 59.839 50.000 0.00 0.00 40.69 4.02
1203 1275 3.414269 GGATCAAGGTTTTGGTTACCGA 58.586 45.455 0.00 0.00 40.69 4.69
1204 1276 3.822167 GGATCAAGGTTTTGGTTACCGAA 59.178 43.478 0.00 0.00 40.69 4.30
1205 1277 4.461431 GGATCAAGGTTTTGGTTACCGAAT 59.539 41.667 4.72 0.00 40.69 3.34
1206 1278 4.839668 TCAAGGTTTTGGTTACCGAATG 57.160 40.909 4.72 0.85 40.69 2.67
1207 1279 4.462133 TCAAGGTTTTGGTTACCGAATGA 58.538 39.130 4.72 3.29 40.69 2.57
1208 1280 4.517453 TCAAGGTTTTGGTTACCGAATGAG 59.483 41.667 4.72 0.00 40.69 2.90
1209 1281 3.418047 AGGTTTTGGTTACCGAATGAGG 58.582 45.455 4.72 0.00 40.69 3.86
1210 1282 2.094906 GGTTTTGGTTACCGAATGAGGC 60.095 50.000 4.72 0.00 33.69 4.70
1211 1283 2.554893 GTTTTGGTTACCGAATGAGGCA 59.445 45.455 4.72 0.00 33.69 4.75
1212 1284 2.799126 TTGGTTACCGAATGAGGCAT 57.201 45.000 0.00 0.00 33.69 4.40
1213 1285 2.799126 TGGTTACCGAATGAGGCATT 57.201 45.000 0.00 0.00 36.72 3.56
1214 1286 3.080300 TGGTTACCGAATGAGGCATTT 57.920 42.857 0.00 0.00 33.90 2.32
1215 1287 3.426615 TGGTTACCGAATGAGGCATTTT 58.573 40.909 0.00 0.00 33.90 1.82
1216 1288 3.829601 TGGTTACCGAATGAGGCATTTTT 59.170 39.130 0.00 0.00 33.90 1.94
1217 1289 5.010933 TGGTTACCGAATGAGGCATTTTTA 58.989 37.500 0.00 0.00 33.90 1.52
1218 1290 5.654650 TGGTTACCGAATGAGGCATTTTTAT 59.345 36.000 0.00 0.00 33.90 1.40
1219 1291 6.183360 TGGTTACCGAATGAGGCATTTTTATC 60.183 38.462 0.00 0.00 33.90 1.75
1220 1292 4.552166 ACCGAATGAGGCATTTTTATCG 57.448 40.909 0.00 0.00 33.90 2.92
1221 1293 4.196193 ACCGAATGAGGCATTTTTATCGA 58.804 39.130 0.00 0.00 33.90 3.59
1222 1294 4.273480 ACCGAATGAGGCATTTTTATCGAG 59.727 41.667 0.00 0.00 33.90 4.04
1223 1295 4.319766 CCGAATGAGGCATTTTTATCGAGG 60.320 45.833 0.00 0.00 33.90 4.63
1224 1296 4.319766 CGAATGAGGCATTTTTATCGAGGG 60.320 45.833 0.00 0.00 33.90 4.30
1225 1297 2.930950 TGAGGCATTTTTATCGAGGGG 58.069 47.619 0.00 0.00 0.00 4.79
1226 1298 2.230660 GAGGCATTTTTATCGAGGGGG 58.769 52.381 0.00 0.00 0.00 5.40
1227 1299 1.850345 AGGCATTTTTATCGAGGGGGA 59.150 47.619 0.00 0.00 0.00 4.81
1228 1300 1.954382 GGCATTTTTATCGAGGGGGAC 59.046 52.381 0.00 0.00 0.00 4.46
1229 1301 2.422945 GGCATTTTTATCGAGGGGGACT 60.423 50.000 0.00 0.00 0.00 3.85
1230 1302 2.618709 GCATTTTTATCGAGGGGGACTG 59.381 50.000 0.00 0.00 0.00 3.51
1231 1303 3.684413 GCATTTTTATCGAGGGGGACTGA 60.684 47.826 0.00 0.00 0.00 3.41
1232 1304 4.718961 CATTTTTATCGAGGGGGACTGAT 58.281 43.478 0.00 0.00 0.00 2.90
1233 1305 5.744887 GCATTTTTATCGAGGGGGACTGATA 60.745 44.000 0.00 0.00 0.00 2.15
1234 1306 5.961398 TTTTTATCGAGGGGGACTGATAA 57.039 39.130 0.00 0.00 32.43 1.75
1235 1307 5.961398 TTTTATCGAGGGGGACTGATAAA 57.039 39.130 0.00 2.97 37.38 1.40
1236 1308 6.509523 TTTTATCGAGGGGGACTGATAAAT 57.490 37.500 6.98 0.00 38.06 1.40
1237 1309 5.483685 TTATCGAGGGGGACTGATAAATG 57.516 43.478 0.00 0.00 31.90 2.32
1238 1310 1.416401 TCGAGGGGGACTGATAAATGC 59.584 52.381 0.00 0.00 0.00 3.56
1239 1311 1.873903 CGAGGGGGACTGATAAATGCG 60.874 57.143 0.00 0.00 0.00 4.73
1240 1312 0.474184 AGGGGGACTGATAAATGCGG 59.526 55.000 0.00 0.00 0.00 5.69
1241 1313 0.182775 GGGGGACTGATAAATGCGGT 59.817 55.000 0.00 0.00 0.00 5.68
1242 1314 1.409661 GGGGGACTGATAAATGCGGTT 60.410 52.381 0.00 0.00 0.00 4.44
1243 1315 2.158726 GGGGGACTGATAAATGCGGTTA 60.159 50.000 0.00 0.00 0.00 2.85
1244 1316 2.876550 GGGGACTGATAAATGCGGTTAC 59.123 50.000 0.00 0.00 0.00 2.50
1245 1317 2.876550 GGGACTGATAAATGCGGTTACC 59.123 50.000 0.00 0.00 0.00 2.85
1246 1318 3.537580 GGACTGATAAATGCGGTTACCA 58.462 45.455 1.13 0.00 0.00 3.25
1247 1319 3.311596 GGACTGATAAATGCGGTTACCAC 59.688 47.826 1.13 0.00 0.00 4.16
1248 1320 2.933906 ACTGATAAATGCGGTTACCACG 59.066 45.455 1.13 0.00 0.00 4.94
1249 1321 2.281517 TGATAAATGCGGTTACCACGG 58.718 47.619 1.13 0.00 0.00 4.94
1250 1322 2.282407 GATAAATGCGGTTACCACGGT 58.718 47.619 1.13 0.00 0.00 4.83
1251 1323 2.181954 TAAATGCGGTTACCACGGTT 57.818 45.000 1.13 0.00 0.00 4.44
1252 1324 2.181954 AAATGCGGTTACCACGGTTA 57.818 45.000 1.13 0.00 0.00 2.85
1253 1325 1.441738 AATGCGGTTACCACGGTTAC 58.558 50.000 1.13 0.00 0.00 2.50
1254 1326 0.391528 ATGCGGTTACCACGGTTACC 60.392 55.000 13.32 13.32 42.42 2.85
1271 1343 6.997239 GGTTACCGAGAAATACCAAGAAAT 57.003 37.500 0.00 0.00 0.00 2.17
1273 1345 7.913423 GGTTACCGAGAAATACCAAGAAATAC 58.087 38.462 0.00 0.00 0.00 1.89
1274 1346 7.011763 GGTTACCGAGAAATACCAAGAAATACC 59.988 40.741 0.00 0.00 0.00 2.73
1275 1347 5.114081 ACCGAGAAATACCAAGAAATACCG 58.886 41.667 0.00 0.00 0.00 4.02
1276 1348 5.105228 ACCGAGAAATACCAAGAAATACCGA 60.105 40.000 0.00 0.00 0.00 4.69
1277 1349 5.989777 CCGAGAAATACCAAGAAATACCGAT 59.010 40.000 0.00 0.00 0.00 4.18
1278 1350 7.149973 CCGAGAAATACCAAGAAATACCGATA 58.850 38.462 0.00 0.00 0.00 2.92
1279 1351 7.654520 CCGAGAAATACCAAGAAATACCGATAA 59.345 37.037 0.00 0.00 0.00 1.75
1280 1352 9.204570 CGAGAAATACCAAGAAATACCGATAAT 57.795 33.333 0.00 0.00 0.00 1.28
1288 1360 9.550406 ACCAAGAAATACCGATAATATTTCGAA 57.450 29.630 16.51 0.00 46.64 3.71
1344 1416 7.406799 AATTGAATGAACGAACATTTGAACC 57.593 32.000 11.46 2.47 40.03 3.62
1345 1417 5.506686 TGAATGAACGAACATTTGAACCA 57.493 34.783 11.46 4.41 40.03 3.67
1346 1418 5.895928 TGAATGAACGAACATTTGAACCAA 58.104 33.333 11.46 0.00 40.03 3.67
1347 1419 6.333416 TGAATGAACGAACATTTGAACCAAA 58.667 32.000 11.46 0.00 40.03 3.28
1348 1420 6.475076 TGAATGAACGAACATTTGAACCAAAG 59.525 34.615 11.46 0.00 40.03 2.77
1349 1421 5.568685 TGAACGAACATTTGAACCAAAGA 57.431 34.783 0.00 0.00 36.76 2.52
1350 1422 5.336744 TGAACGAACATTTGAACCAAAGAC 58.663 37.500 0.00 0.00 36.76 3.01
1351 1423 4.301637 ACGAACATTTGAACCAAAGACC 57.698 40.909 0.00 0.00 36.76 3.85
1352 1424 3.951680 ACGAACATTTGAACCAAAGACCT 59.048 39.130 0.00 0.00 36.76 3.85
1353 1425 4.036380 ACGAACATTTGAACCAAAGACCTC 59.964 41.667 0.00 0.00 36.76 3.85
1354 1426 4.275936 CGAACATTTGAACCAAAGACCTCT 59.724 41.667 0.00 0.00 36.76 3.69
1355 1427 5.560953 CGAACATTTGAACCAAAGACCTCTC 60.561 44.000 0.00 0.00 36.76 3.20
1356 1428 4.792068 ACATTTGAACCAAAGACCTCTCA 58.208 39.130 0.00 0.00 36.76 3.27
1357 1429 5.200483 ACATTTGAACCAAAGACCTCTCAA 58.800 37.500 0.00 0.00 36.76 3.02
1358 1430 5.656416 ACATTTGAACCAAAGACCTCTCAAA 59.344 36.000 0.00 0.00 36.76 2.69
1359 1431 6.154363 ACATTTGAACCAAAGACCTCTCAAAA 59.846 34.615 0.00 0.00 36.76 2.44
1360 1432 5.576447 TTGAACCAAAGACCTCTCAAAAC 57.424 39.130 0.00 0.00 0.00 2.43
1361 1433 4.594970 TGAACCAAAGACCTCTCAAAACA 58.405 39.130 0.00 0.00 0.00 2.83
1362 1434 4.640201 TGAACCAAAGACCTCTCAAAACAG 59.360 41.667 0.00 0.00 0.00 3.16
1363 1435 3.555966 ACCAAAGACCTCTCAAAACAGG 58.444 45.455 0.00 0.00 35.69 4.00
1364 1436 3.202151 ACCAAAGACCTCTCAAAACAGGA 59.798 43.478 0.00 0.00 33.52 3.86
1365 1437 4.207165 CCAAAGACCTCTCAAAACAGGAA 58.793 43.478 0.00 0.00 33.52 3.36
1366 1438 4.036852 CCAAAGACCTCTCAAAACAGGAAC 59.963 45.833 0.00 0.00 33.52 3.62
1367 1439 4.779993 AAGACCTCTCAAAACAGGAACT 57.220 40.909 0.00 0.00 43.88 3.01
1368 1440 5.888982 AAGACCTCTCAAAACAGGAACTA 57.111 39.130 0.00 0.00 36.02 2.24
1369 1441 5.476091 AGACCTCTCAAAACAGGAACTAG 57.524 43.478 0.00 0.00 36.02 2.57
1370 1442 4.284746 AGACCTCTCAAAACAGGAACTAGG 59.715 45.833 0.00 0.00 36.02 3.02
1371 1443 3.974642 ACCTCTCAAAACAGGAACTAGGT 59.025 43.478 0.00 0.00 36.02 3.08
1372 1444 4.412528 ACCTCTCAAAACAGGAACTAGGTT 59.587 41.667 0.00 0.00 36.02 3.50
1373 1445 5.104067 ACCTCTCAAAACAGGAACTAGGTTT 60.104 40.000 0.00 0.00 36.35 3.27
1374 1446 5.239525 CCTCTCAAAACAGGAACTAGGTTTG 59.760 44.000 0.00 0.00 41.76 2.93
1375 1447 4.578928 TCTCAAAACAGGAACTAGGTTTGC 59.421 41.667 0.00 0.00 40.91 3.68
1376 1448 4.274147 TCAAAACAGGAACTAGGTTTGCA 58.726 39.130 0.00 0.00 40.91 4.08
1377 1449 4.707448 TCAAAACAGGAACTAGGTTTGCAA 59.293 37.500 0.00 0.00 40.91 4.08
1378 1450 4.649088 AAACAGGAACTAGGTTTGCAAC 57.351 40.909 0.00 0.00 34.06 4.17
1379 1451 2.583143 ACAGGAACTAGGTTTGCAACC 58.417 47.619 0.00 4.13 46.20 3.77
1387 1459 4.804496 GTTTGCAACCAACACGCT 57.196 50.000 0.00 0.00 0.00 5.07
1388 1460 3.928343 GTTTGCAACCAACACGCTA 57.072 47.368 0.00 0.00 0.00 4.26
1389 1461 1.753956 GTTTGCAACCAACACGCTAG 58.246 50.000 0.00 0.00 0.00 3.42
1390 1462 1.332375 GTTTGCAACCAACACGCTAGA 59.668 47.619 0.00 0.00 0.00 2.43
1391 1463 1.669604 TTGCAACCAACACGCTAGAA 58.330 45.000 0.00 0.00 0.00 2.10
1392 1464 0.941542 TGCAACCAACACGCTAGAAC 59.058 50.000 0.00 0.00 0.00 3.01
1393 1465 0.237498 GCAACCAACACGCTAGAACC 59.763 55.000 0.00 0.00 0.00 3.62
1394 1466 0.872388 CAACCAACACGCTAGAACCC 59.128 55.000 0.00 0.00 0.00 4.11
1395 1467 0.470766 AACCAACACGCTAGAACCCA 59.529 50.000 0.00 0.00 0.00 4.51
1396 1468 0.250166 ACCAACACGCTAGAACCCAC 60.250 55.000 0.00 0.00 0.00 4.61
1397 1469 0.034896 CCAACACGCTAGAACCCACT 59.965 55.000 0.00 0.00 0.00 4.00
1398 1470 1.429463 CAACACGCTAGAACCCACTC 58.571 55.000 0.00 0.00 0.00 3.51
1399 1471 1.000955 CAACACGCTAGAACCCACTCT 59.999 52.381 0.00 0.00 0.00 3.24
1400 1472 0.889306 ACACGCTAGAACCCACTCTC 59.111 55.000 0.00 0.00 0.00 3.20
1401 1473 0.888619 CACGCTAGAACCCACTCTCA 59.111 55.000 0.00 0.00 0.00 3.27
1402 1474 1.478510 CACGCTAGAACCCACTCTCAT 59.521 52.381 0.00 0.00 0.00 2.90
1403 1475 1.478510 ACGCTAGAACCCACTCTCATG 59.521 52.381 0.00 0.00 0.00 3.07
1404 1476 1.202463 CGCTAGAACCCACTCTCATGG 60.202 57.143 0.00 0.00 39.71 3.66
1405 1477 1.474143 GCTAGAACCCACTCTCATGGC 60.474 57.143 0.00 0.00 38.55 4.40
1406 1478 1.833630 CTAGAACCCACTCTCATGGCA 59.166 52.381 0.00 0.00 38.55 4.92
1407 1479 1.293062 AGAACCCACTCTCATGGCAT 58.707 50.000 0.00 0.00 38.55 4.40
1408 1480 1.637553 AGAACCCACTCTCATGGCATT 59.362 47.619 0.00 0.00 38.55 3.56
1409 1481 2.846206 AGAACCCACTCTCATGGCATTA 59.154 45.455 0.00 0.00 38.55 1.90
1410 1482 3.266772 AGAACCCACTCTCATGGCATTAA 59.733 43.478 0.00 0.00 38.55 1.40
1411 1483 3.959495 ACCCACTCTCATGGCATTAAT 57.041 42.857 0.00 0.00 38.55 1.40
1412 1484 4.255510 ACCCACTCTCATGGCATTAATT 57.744 40.909 0.00 0.00 38.55 1.40
1413 1485 5.387113 ACCCACTCTCATGGCATTAATTA 57.613 39.130 0.00 0.00 38.55 1.40
1414 1486 5.380043 ACCCACTCTCATGGCATTAATTAG 58.620 41.667 0.00 0.00 38.55 1.73
1415 1487 5.132648 ACCCACTCTCATGGCATTAATTAGA 59.867 40.000 0.00 0.00 38.55 2.10
1416 1488 6.183361 ACCCACTCTCATGGCATTAATTAGAT 60.183 38.462 0.00 0.00 38.55 1.98
1417 1489 6.373774 CCCACTCTCATGGCATTAATTAGATC 59.626 42.308 0.00 0.00 38.55 2.75
1418 1490 6.373774 CCACTCTCATGGCATTAATTAGATCC 59.626 42.308 0.00 0.00 31.52 3.36
1419 1491 7.166851 CACTCTCATGGCATTAATTAGATCCT 58.833 38.462 0.00 0.00 0.00 3.24
1420 1492 8.316946 CACTCTCATGGCATTAATTAGATCCTA 58.683 37.037 0.00 0.00 0.00 2.94
1421 1493 8.317679 ACTCTCATGGCATTAATTAGATCCTAC 58.682 37.037 0.00 0.00 0.00 3.18
1422 1494 8.441311 TCTCATGGCATTAATTAGATCCTACT 57.559 34.615 0.00 0.00 0.00 2.57
1423 1495 8.884323 TCTCATGGCATTAATTAGATCCTACTT 58.116 33.333 0.00 0.00 0.00 2.24
1492 1564 2.818132 TTTTTGCTTGGTGCGGGG 59.182 55.556 0.00 0.00 46.63 5.73
1493 1565 1.758514 TTTTTGCTTGGTGCGGGGA 60.759 52.632 0.00 0.00 46.63 4.81
1494 1566 1.118356 TTTTTGCTTGGTGCGGGGAT 61.118 50.000 0.00 0.00 46.63 3.85
1495 1567 1.118356 TTTTGCTTGGTGCGGGGATT 61.118 50.000 0.00 0.00 46.63 3.01
1496 1568 1.118356 TTTGCTTGGTGCGGGGATTT 61.118 50.000 0.00 0.00 46.63 2.17
1497 1569 0.251386 TTGCTTGGTGCGGGGATTTA 60.251 50.000 0.00 0.00 46.63 1.40
1498 1570 0.963355 TGCTTGGTGCGGGGATTTAC 60.963 55.000 0.00 0.00 46.63 2.01
1499 1571 1.663379 GCTTGGTGCGGGGATTTACC 61.663 60.000 0.00 0.00 38.08 2.85
1516 1588 3.614143 CGAGAGGCGCGGAAATAC 58.386 61.111 8.83 0.00 0.00 1.89
1517 1589 2.293627 CGAGAGGCGCGGAAATACG 61.294 63.158 8.83 0.00 0.00 3.06
1526 1598 3.047752 CGGAAATACGCGGTAACCA 57.952 52.632 12.47 0.00 0.00 3.67
1527 1599 1.574134 CGGAAATACGCGGTAACCAT 58.426 50.000 12.47 0.00 0.00 3.55
1528 1600 1.259507 CGGAAATACGCGGTAACCATG 59.740 52.381 12.47 0.00 0.00 3.66
1529 1601 1.600485 GGAAATACGCGGTAACCATGG 59.400 52.381 11.19 11.19 0.00 3.66
1530 1602 1.600485 GAAATACGCGGTAACCATGGG 59.400 52.381 18.09 0.00 0.00 4.00
1531 1603 0.831966 AATACGCGGTAACCATGGGA 59.168 50.000 18.09 0.00 0.00 4.37
1532 1604 0.831966 ATACGCGGTAACCATGGGAA 59.168 50.000 18.09 0.00 0.00 3.97
1533 1605 0.612229 TACGCGGTAACCATGGGAAA 59.388 50.000 18.09 0.00 0.00 3.13
1534 1606 0.034863 ACGCGGTAACCATGGGAAAT 60.035 50.000 18.09 1.59 0.00 2.17
1535 1607 0.661020 CGCGGTAACCATGGGAAATC 59.339 55.000 18.09 0.00 0.00 2.17
1536 1608 1.745827 CGCGGTAACCATGGGAAATCT 60.746 52.381 18.09 0.00 0.00 2.40
1537 1609 1.947456 GCGGTAACCATGGGAAATCTC 59.053 52.381 18.09 0.00 0.00 2.75
1538 1610 2.210116 CGGTAACCATGGGAAATCTCG 58.790 52.381 18.09 6.68 0.00 4.04
1539 1611 2.159014 CGGTAACCATGGGAAATCTCGA 60.159 50.000 18.09 0.00 0.00 4.04
1540 1612 3.680475 CGGTAACCATGGGAAATCTCGAA 60.680 47.826 18.09 0.00 0.00 3.71
1541 1613 4.266714 GGTAACCATGGGAAATCTCGAAA 58.733 43.478 18.09 0.00 0.00 3.46
1542 1614 4.887655 GGTAACCATGGGAAATCTCGAAAT 59.112 41.667 18.09 0.00 0.00 2.17
1543 1615 5.359860 GGTAACCATGGGAAATCTCGAAATT 59.640 40.000 18.09 0.00 0.00 1.82
1544 1616 6.127451 GGTAACCATGGGAAATCTCGAAATTT 60.127 38.462 18.09 0.00 0.00 1.82
1545 1617 5.582689 ACCATGGGAAATCTCGAAATTTC 57.417 39.130 18.09 14.57 42.41 2.17
1562 1634 7.157050 GAAATTTCGACTTGTAACCAAAACC 57.843 36.000 1.68 0.00 0.00 3.27
1563 1635 6.459670 AATTTCGACTTGTAACCAAAACCT 57.540 33.333 0.00 0.00 0.00 3.50
1564 1636 5.900865 TTTCGACTTGTAACCAAAACCTT 57.099 34.783 0.00 0.00 0.00 3.50
1573 1645 1.609210 CCAAAACCTTGCCCCGGAT 60.609 57.895 0.73 0.00 0.00 4.18
1576 1648 0.406361 AAAACCTTGCCCCGGATACA 59.594 50.000 0.73 0.00 0.00 2.29
1581 1653 0.469917 CTTGCCCCGGATACAGTCAT 59.530 55.000 0.73 0.00 0.00 3.06
1778 2150 1.619669 ACCACCATCCCCTTCCTCC 60.620 63.158 0.00 0.00 0.00 4.30
1779 2151 1.619363 CCACCATCCCCTTCCTCCA 60.619 63.158 0.00 0.00 0.00 3.86
1780 2152 1.609783 CACCATCCCCTTCCTCCAC 59.390 63.158 0.00 0.00 0.00 4.02
1781 2153 1.995626 ACCATCCCCTTCCTCCACG 60.996 63.158 0.00 0.00 0.00 4.94
1782 2154 2.190578 CATCCCCTTCCTCCACGC 59.809 66.667 0.00 0.00 0.00 5.34
1890 2264 0.532640 ATGAGCGCCGATACATTGCA 60.533 50.000 2.29 0.00 0.00 4.08
1931 2305 1.679305 GTCCTCTCTGACTCCGGCA 60.679 63.158 0.00 0.00 32.39 5.69
2190 2818 2.030412 ACCATGTTCGCGAGCACA 59.970 55.556 28.07 21.44 42.43 4.57
2530 7033 0.179134 CACGGTGAAGGAGGTCGATC 60.179 60.000 0.74 0.00 0.00 3.69
2632 7135 4.223953 TGCTTGTTGGGTGGGTTAAATTA 58.776 39.130 0.00 0.00 0.00 1.40
2649 7152 9.923143 GGTTAAATTACAAGGTTGAAGCTAAAT 57.077 29.630 0.00 0.00 0.00 1.40
2679 7182 9.483916 AATAGTTTATGCGCATTATACACTACA 57.516 29.630 30.42 6.44 30.45 2.74
2680 7183 7.962964 AGTTTATGCGCATTATACACTACAT 57.037 32.000 30.42 1.72 0.00 2.29
2681 7184 7.796838 AGTTTATGCGCATTATACACTACATG 58.203 34.615 30.42 0.00 0.00 3.21
2682 7185 7.441157 AGTTTATGCGCATTATACACTACATGT 59.559 33.333 30.42 2.69 46.06 3.21
2683 7186 7.722795 TTATGCGCATTATACACTACATGTT 57.277 32.000 30.42 0.00 43.19 2.71
2684 7187 6.618287 ATGCGCATTATACACTACATGTTT 57.382 33.333 19.28 0.00 43.19 2.83
2685 7188 6.429791 TGCGCATTATACACTACATGTTTT 57.570 33.333 5.66 0.00 43.19 2.43
2686 7189 6.847400 TGCGCATTATACACTACATGTTTTT 58.153 32.000 5.66 0.00 43.19 1.94
2902 10269 6.191315 TGTATTTGGCAGCTAGGGATTTTTA 58.809 36.000 0.00 0.00 0.00 1.52
2906 10273 6.619329 TTGGCAGCTAGGGATTTTTATTTT 57.381 33.333 0.00 0.00 0.00 1.82
3018 10385 2.650778 CTTGGGAAGTTTGGCGGC 59.349 61.111 0.00 0.00 0.00 6.53
3097 10464 1.167851 TTGCTCGCAGAAATTCCCAG 58.832 50.000 0.00 0.00 34.09 4.45
3111 10479 8.411683 CAGAAATTCCCAGGAATCTGATTAAAG 58.588 37.037 19.01 0.00 43.26 1.85
3146 10515 2.691011 GGCCAGTTCGACTCTAAGAGAT 59.309 50.000 0.00 0.00 33.32 2.75
3165 10534 1.447838 GGTCGATGTGGATGCGTGT 60.448 57.895 0.00 0.00 0.00 4.49
3167 10536 0.370273 GTCGATGTGGATGCGTGTTC 59.630 55.000 0.00 0.00 0.00 3.18
3263 10635 0.383231 GGGCCGCTTGATTCAAGATG 59.617 55.000 26.72 17.90 43.42 2.90
3271 10643 5.471116 CCGCTTGATTCAAGATGGATCAATA 59.529 40.000 26.72 0.00 43.42 1.90
3276 10648 9.227777 CTTGATTCAAGATGGATCAATAGCATA 57.772 33.333 19.61 0.00 43.42 3.14
3277 10649 9.749340 TTGATTCAAGATGGATCAATAGCATAT 57.251 29.630 9.47 0.00 0.00 1.78
3278 10650 9.174166 TGATTCAAGATGGATCAATAGCATATG 57.826 33.333 0.00 0.00 0.00 1.78
3279 10651 6.997239 TCAAGATGGATCAATAGCATATGC 57.003 37.500 20.36 20.36 42.49 3.14
3323 10695 3.762293 TCGGGTTTCGAGTTCGGA 58.238 55.556 1.26 0.00 43.74 4.55
3344 10716 6.586082 TCGGATACTACTGAAACGGTTTAAAC 59.414 38.462 9.98 9.98 0.00 2.01
3391 10763 4.217210 CCCACCAGCAACCCCACA 62.217 66.667 0.00 0.00 0.00 4.17
3412 10784 3.829601 CAGGGATAGAAAGACGCCTATCT 59.170 47.826 0.00 0.00 40.46 1.98
3423 10795 1.133136 ACGCCTATCTGTGTCCCCTAT 60.133 52.381 0.00 0.00 0.00 2.57
3424 10796 2.109480 ACGCCTATCTGTGTCCCCTATA 59.891 50.000 0.00 0.00 0.00 1.31
3516 10888 5.537674 TCATTGAGCTCTGCTACTGATGATA 59.462 40.000 16.19 0.00 39.88 2.15
3525 10897 4.441792 TGCTACTGATGATATGCGTTTGT 58.558 39.130 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.105477 CAGATTATGGTGGAGGGGACTG 59.895 54.545 0.00 0.00 44.43 3.51
3 4 2.127708 ACAGATTATGGTGGAGGGGAC 58.872 52.381 0.00 0.00 0.00 4.46
4 5 2.126882 CACAGATTATGGTGGAGGGGA 58.873 52.381 0.00 0.00 0.00 4.81
5 6 1.477558 GCACAGATTATGGTGGAGGGG 60.478 57.143 0.00 0.00 35.58 4.79
6 7 1.477558 GGCACAGATTATGGTGGAGGG 60.478 57.143 0.00 0.00 35.58 4.30
7 8 1.212688 TGGCACAGATTATGGTGGAGG 59.787 52.381 0.00 0.00 35.58 4.30
8 9 2.715749 TGGCACAGATTATGGTGGAG 57.284 50.000 0.00 0.00 35.58 3.86
22 23 1.133699 TGGATGGGAGATGAATGGCAC 60.134 52.381 0.00 0.00 0.00 5.01
23 24 1.224436 TGGATGGGAGATGAATGGCA 58.776 50.000 0.00 0.00 0.00 4.92
24 25 2.369983 TTGGATGGGAGATGAATGGC 57.630 50.000 0.00 0.00 0.00 4.40
25 26 3.162666 CCATTGGATGGGAGATGAATGG 58.837 50.000 0.00 0.00 46.86 3.16
37 38 5.531122 AATGAAATCTGAGCCATTGGATG 57.469 39.130 6.95 0.00 0.00 3.51
38 39 6.555463 AAAATGAAATCTGAGCCATTGGAT 57.445 33.333 6.95 0.00 30.56 3.41
39 40 6.211986 AGAAAAATGAAATCTGAGCCATTGGA 59.788 34.615 6.95 0.00 30.56 3.53
40 41 6.403878 AGAAAAATGAAATCTGAGCCATTGG 58.596 36.000 0.00 0.00 30.56 3.16
41 42 9.595823 AATAGAAAAATGAAATCTGAGCCATTG 57.404 29.630 0.00 0.00 30.56 2.82
42 43 9.813446 GAATAGAAAAATGAAATCTGAGCCATT 57.187 29.630 0.00 0.00 0.00 3.16
43 44 9.198475 AGAATAGAAAAATGAAATCTGAGCCAT 57.802 29.630 0.00 0.00 0.00 4.40
44 45 8.585471 AGAATAGAAAAATGAAATCTGAGCCA 57.415 30.769 0.00 0.00 0.00 4.75
45 46 9.866798 AAAGAATAGAAAAATGAAATCTGAGCC 57.133 29.630 0.00 0.00 0.00 4.70
55 56 9.630098 GCTTCATGTGAAAGAATAGAAAAATGA 57.370 29.630 0.00 0.00 33.07 2.57
56 57 9.635520 AGCTTCATGTGAAAGAATAGAAAAATG 57.364 29.630 0.00 0.00 33.07 2.32
57 58 9.852091 GAGCTTCATGTGAAAGAATAGAAAAAT 57.148 29.630 0.00 0.00 33.07 1.82
58 59 8.849168 TGAGCTTCATGTGAAAGAATAGAAAAA 58.151 29.630 0.00 0.00 33.07 1.94
59 60 8.394971 TGAGCTTCATGTGAAAGAATAGAAAA 57.605 30.769 0.00 0.00 33.07 2.29
60 61 7.879677 TCTGAGCTTCATGTGAAAGAATAGAAA 59.120 33.333 0.00 0.00 33.07 2.52
61 62 7.389232 TCTGAGCTTCATGTGAAAGAATAGAA 58.611 34.615 0.00 0.00 33.07 2.10
62 63 6.939622 TCTGAGCTTCATGTGAAAGAATAGA 58.060 36.000 0.00 0.00 33.07 1.98
63 64 7.789273 ATCTGAGCTTCATGTGAAAGAATAG 57.211 36.000 0.00 0.00 33.07 1.73
64 65 8.045507 AGAATCTGAGCTTCATGTGAAAGAATA 58.954 33.333 0.00 0.00 33.07 1.75
65 66 6.885376 AGAATCTGAGCTTCATGTGAAAGAAT 59.115 34.615 0.00 0.00 33.07 2.40
66 67 6.236409 AGAATCTGAGCTTCATGTGAAAGAA 58.764 36.000 0.00 0.00 33.07 2.52
67 68 5.802465 AGAATCTGAGCTTCATGTGAAAGA 58.198 37.500 0.00 0.00 33.07 2.52
68 69 7.789273 ATAGAATCTGAGCTTCATGTGAAAG 57.211 36.000 0.00 0.00 33.07 2.62
69 70 8.481314 AGTATAGAATCTGAGCTTCATGTGAAA 58.519 33.333 0.00 0.00 33.07 2.69
70 71 8.016301 AGTATAGAATCTGAGCTTCATGTGAA 57.984 34.615 0.00 0.00 0.00 3.18
71 72 7.594351 AGTATAGAATCTGAGCTTCATGTGA 57.406 36.000 0.00 0.00 0.00 3.58
72 73 8.575589 ACTAGTATAGAATCTGAGCTTCATGTG 58.424 37.037 0.00 0.00 42.77 3.21
73 74 8.704849 ACTAGTATAGAATCTGAGCTTCATGT 57.295 34.615 0.00 0.00 42.77 3.21
74 75 9.409312 CAACTAGTATAGAATCTGAGCTTCATG 57.591 37.037 0.00 0.00 42.77 3.07
75 76 8.087750 GCAACTAGTATAGAATCTGAGCTTCAT 58.912 37.037 0.00 0.00 42.77 2.57
76 77 7.286546 AGCAACTAGTATAGAATCTGAGCTTCA 59.713 37.037 0.00 0.00 42.77 3.02
77 78 7.657336 AGCAACTAGTATAGAATCTGAGCTTC 58.343 38.462 0.00 0.00 42.77 3.86
78 79 7.255801 GGAGCAACTAGTATAGAATCTGAGCTT 60.256 40.741 0.00 0.00 42.77 3.74
79 80 6.208599 GGAGCAACTAGTATAGAATCTGAGCT 59.791 42.308 0.00 0.00 42.77 4.09
80 81 6.386654 GGAGCAACTAGTATAGAATCTGAGC 58.613 44.000 0.00 0.00 42.77 4.26
81 82 6.348950 CGGGAGCAACTAGTATAGAATCTGAG 60.349 46.154 0.00 0.00 42.77 3.35
82 83 5.473846 CGGGAGCAACTAGTATAGAATCTGA 59.526 44.000 0.00 0.00 42.77 3.27
83 84 5.473846 TCGGGAGCAACTAGTATAGAATCTG 59.526 44.000 0.00 0.00 42.77 2.90
84 85 5.632118 TCGGGAGCAACTAGTATAGAATCT 58.368 41.667 0.00 0.00 42.77 2.40
85 86 5.961396 TCGGGAGCAACTAGTATAGAATC 57.039 43.478 0.00 0.00 42.77 2.52
86 87 6.726490 TTTCGGGAGCAACTAGTATAGAAT 57.274 37.500 0.00 0.00 42.77 2.40
87 88 6.726490 ATTTCGGGAGCAACTAGTATAGAA 57.274 37.500 0.00 0.00 42.77 2.10
88 89 7.286087 TGTTATTTCGGGAGCAACTAGTATAGA 59.714 37.037 0.00 0.00 42.77 1.98
89 90 7.431249 TGTTATTTCGGGAGCAACTAGTATAG 58.569 38.462 0.00 0.00 46.50 1.31
90 91 7.350744 TGTTATTTCGGGAGCAACTAGTATA 57.649 36.000 0.00 0.00 0.00 1.47
91 92 6.229936 TGTTATTTCGGGAGCAACTAGTAT 57.770 37.500 0.00 0.00 0.00 2.12
92 93 5.664294 TGTTATTTCGGGAGCAACTAGTA 57.336 39.130 0.00 0.00 0.00 1.82
93 94 4.546829 TGTTATTTCGGGAGCAACTAGT 57.453 40.909 0.00 0.00 0.00 2.57
94 95 4.273480 CCATGTTATTTCGGGAGCAACTAG 59.727 45.833 0.00 0.00 0.00 2.57
95 96 4.080807 TCCATGTTATTTCGGGAGCAACTA 60.081 41.667 0.00 0.00 0.00 2.24
96 97 3.016736 CCATGTTATTTCGGGAGCAACT 58.983 45.455 0.00 0.00 0.00 3.16
97 98 3.013921 TCCATGTTATTTCGGGAGCAAC 58.986 45.455 0.00 0.00 0.00 4.17
98 99 3.358111 TCCATGTTATTTCGGGAGCAA 57.642 42.857 0.00 0.00 0.00 3.91
99 100 3.576078 ATCCATGTTATTTCGGGAGCA 57.424 42.857 0.00 0.00 0.00 4.26
100 101 4.642429 AGTATCCATGTTATTTCGGGAGC 58.358 43.478 0.00 0.00 0.00 4.70
101 102 5.049405 GCAAGTATCCATGTTATTTCGGGAG 60.049 44.000 0.00 0.00 0.00 4.30
102 103 4.819630 GCAAGTATCCATGTTATTTCGGGA 59.180 41.667 0.00 0.00 0.00 5.14
103 104 4.578516 TGCAAGTATCCATGTTATTTCGGG 59.421 41.667 0.00 0.00 0.00 5.14
104 105 5.749596 TGCAAGTATCCATGTTATTTCGG 57.250 39.130 0.00 0.00 0.00 4.30
105 106 7.416817 TGAATGCAAGTATCCATGTTATTTCG 58.583 34.615 0.00 0.00 0.00 3.46
151 152 5.900865 TGGTTTTTACCTTTGTCTTCGTT 57.099 34.783 0.00 0.00 0.00 3.85
154 155 7.145985 GGATCTTGGTTTTTACCTTTGTCTTC 58.854 38.462 0.00 0.00 0.00 2.87
195 196 3.000727 CCAGACCCGACAAATGACTAAC 58.999 50.000 0.00 0.00 0.00 2.34
281 289 5.600908 ACAAACGCATCGTAATACAGTTT 57.399 34.783 0.00 0.00 39.99 2.66
287 295 4.083749 ACTTGCAACAAACGCATCGTAATA 60.084 37.500 0.00 0.00 39.99 0.98
292 300 1.447938 GAACTTGCAACAAACGCATCG 59.552 47.619 0.00 0.00 39.58 3.84
296 304 3.713889 TTTTGAACTTGCAACAAACGC 57.286 38.095 11.89 0.00 34.09 4.84
320 328 2.533942 GCAACGAACGCATCTTGTTTTT 59.466 40.909 0.00 0.00 0.00 1.94
321 329 2.116366 GCAACGAACGCATCTTGTTTT 58.884 42.857 0.00 0.00 0.00 2.43
322 330 1.753956 GCAACGAACGCATCTTGTTT 58.246 45.000 0.00 0.00 0.00 2.83
323 331 0.384230 CGCAACGAACGCATCTTGTT 60.384 50.000 0.00 0.00 0.00 2.83
324 332 1.204062 CGCAACGAACGCATCTTGT 59.796 52.632 0.00 0.00 0.00 3.16
325 333 1.509787 CCGCAACGAACGCATCTTG 60.510 57.895 0.00 0.00 0.00 3.02
343 351 4.399303 ACATGGCAAATCTTTAGGTGCTAC 59.601 41.667 0.00 0.00 37.17 3.58
356 364 3.088532 ACGTAATGGTCACATGGCAAAT 58.911 40.909 0.00 0.00 37.40 2.32
413 422 6.705825 GGTGACAAGGCAAGTTTATGATTTTT 59.294 34.615 0.00 0.00 0.00 1.94
414 423 6.183360 TGGTGACAAGGCAAGTTTATGATTTT 60.183 34.615 0.00 0.00 37.44 1.82
539 553 4.142138 GGTGACAAGACTGATCGTAGGAAT 60.142 45.833 0.00 0.00 0.00 3.01
542 556 2.159226 GGGTGACAAGACTGATCGTAGG 60.159 54.545 0.00 0.00 0.00 3.18
546 560 3.868757 TTAGGGTGACAAGACTGATCG 57.131 47.619 0.00 0.00 0.00 3.69
562 576 8.075574 GGCAAAATCTGGAAAATTGTTTTTAGG 58.924 33.333 0.00 0.00 35.20 2.69
566 580 7.427214 CATGGCAAAATCTGGAAAATTGTTTT 58.573 30.769 0.00 0.00 35.12 2.43
572 586 4.224370 AGAGCATGGCAAAATCTGGAAAAT 59.776 37.500 0.00 0.00 0.00 1.82
608 622 2.157668 GGTCACACGACAAATGTAGCAG 59.842 50.000 0.00 0.00 44.54 4.24
719 733 5.046663 GCCTAATTGAGAATTTTTGGGTGGA 60.047 40.000 0.00 0.00 32.38 4.02
720 734 5.178061 GCCTAATTGAGAATTTTTGGGTGG 58.822 41.667 0.00 0.00 32.38 4.61
721 735 5.178061 GGCCTAATTGAGAATTTTTGGGTG 58.822 41.667 0.00 0.00 32.38 4.61
730 745 4.413760 CCATCCATGGCCTAATTGAGAAT 58.586 43.478 6.96 0.00 41.75 2.40
763 778 2.048877 AGCTTGCCATTGTTGCGC 60.049 55.556 0.00 0.00 0.00 6.09
779 794 4.148696 GGTTGCAATCGACAAAACAATGAG 59.851 41.667 0.59 0.00 0.00 2.90
796 811 7.913674 AAAGAAAACATACAAAAAGGTTGCA 57.086 28.000 0.00 0.00 0.00 4.08
856 926 0.179134 GTGACACGCTAGTAGGCAGG 60.179 60.000 0.00 0.00 0.00 4.85
857 927 0.526211 TGTGACACGCTAGTAGGCAG 59.474 55.000 0.22 0.00 0.00 4.85
858 928 0.526211 CTGTGACACGCTAGTAGGCA 59.474 55.000 0.22 0.00 0.00 4.75
1080 1152 1.454111 GCGGTCTAGGAGGCTCAGA 60.454 63.158 17.69 8.69 0.00 3.27
1102 1174 2.359230 GAAGGCTGCAGCGAAGGT 60.359 61.111 31.19 14.61 43.26 3.50
1121 1193 2.090604 GAATAAACCGCGCGAGGAGC 62.091 60.000 35.95 12.91 43.95 4.70
1134 1206 4.977393 GCCTCCGGCCTGAATAAA 57.023 55.556 0.00 0.00 44.06 1.40
1173 1245 1.131303 AACCTTGATCCGGGGTGTCA 61.131 55.000 0.00 0.00 33.20 3.58
1186 1258 4.320935 CCTCATTCGGTAACCAAAACCTTG 60.321 45.833 0.00 0.00 34.66 3.61
1187 1259 3.824443 CCTCATTCGGTAACCAAAACCTT 59.176 43.478 0.00 0.00 34.66 3.50
1188 1260 3.418047 CCTCATTCGGTAACCAAAACCT 58.582 45.455 0.00 0.00 34.66 3.50
1189 1261 2.094906 GCCTCATTCGGTAACCAAAACC 60.095 50.000 0.00 0.00 0.00 3.27
1190 1262 2.554893 TGCCTCATTCGGTAACCAAAAC 59.445 45.455 0.00 0.00 0.00 2.43
1191 1263 2.865079 TGCCTCATTCGGTAACCAAAA 58.135 42.857 0.00 0.00 0.00 2.44
1192 1264 2.570415 TGCCTCATTCGGTAACCAAA 57.430 45.000 0.00 0.00 0.00 3.28
1193 1265 2.799126 ATGCCTCATTCGGTAACCAA 57.201 45.000 0.00 0.00 0.00 3.67
1194 1266 2.799126 AATGCCTCATTCGGTAACCA 57.201 45.000 0.00 0.00 26.27 3.67
1195 1267 4.450082 AAAAATGCCTCATTCGGTAACC 57.550 40.909 0.00 0.00 32.43 2.85
1196 1268 5.907391 CGATAAAAATGCCTCATTCGGTAAC 59.093 40.000 0.00 0.00 32.43 2.50
1197 1269 5.818336 TCGATAAAAATGCCTCATTCGGTAA 59.182 36.000 0.00 0.00 32.43 2.85
1198 1270 5.361427 TCGATAAAAATGCCTCATTCGGTA 58.639 37.500 0.00 0.00 32.43 4.02
1199 1271 4.196193 TCGATAAAAATGCCTCATTCGGT 58.804 39.130 0.00 0.00 32.43 4.69
1200 1272 4.319766 CCTCGATAAAAATGCCTCATTCGG 60.320 45.833 0.00 0.00 32.43 4.30
1201 1273 4.319766 CCCTCGATAAAAATGCCTCATTCG 60.320 45.833 0.00 0.00 32.43 3.34
1202 1274 4.022849 CCCCTCGATAAAAATGCCTCATTC 60.023 45.833 0.00 0.00 32.43 2.67
1203 1275 3.891366 CCCCTCGATAAAAATGCCTCATT 59.109 43.478 0.00 0.00 35.39 2.57
1204 1276 3.490348 CCCCTCGATAAAAATGCCTCAT 58.510 45.455 0.00 0.00 0.00 2.90
1205 1277 2.422803 CCCCCTCGATAAAAATGCCTCA 60.423 50.000 0.00 0.00 0.00 3.86
1206 1278 2.158667 TCCCCCTCGATAAAAATGCCTC 60.159 50.000 0.00 0.00 0.00 4.70
1207 1279 1.850345 TCCCCCTCGATAAAAATGCCT 59.150 47.619 0.00 0.00 0.00 4.75
1208 1280 1.954382 GTCCCCCTCGATAAAAATGCC 59.046 52.381 0.00 0.00 0.00 4.40
1209 1281 2.618709 CAGTCCCCCTCGATAAAAATGC 59.381 50.000 0.00 0.00 0.00 3.56
1210 1282 4.150897 TCAGTCCCCCTCGATAAAAATG 57.849 45.455 0.00 0.00 0.00 2.32
1211 1283 6.509523 TTATCAGTCCCCCTCGATAAAAAT 57.490 37.500 0.00 0.00 29.67 1.82
1212 1284 5.961398 TTATCAGTCCCCCTCGATAAAAA 57.039 39.130 0.00 0.00 29.67 1.94
1213 1285 5.961398 TTTATCAGTCCCCCTCGATAAAA 57.039 39.130 0.00 0.00 37.38 1.52
1214 1286 5.744887 GCATTTATCAGTCCCCCTCGATAAA 60.745 44.000 0.00 0.00 41.82 1.40
1215 1287 4.262894 GCATTTATCAGTCCCCCTCGATAA 60.263 45.833 0.00 0.00 0.00 1.75
1216 1288 3.260884 GCATTTATCAGTCCCCCTCGATA 59.739 47.826 0.00 0.00 0.00 2.92
1217 1289 2.039084 GCATTTATCAGTCCCCCTCGAT 59.961 50.000 0.00 0.00 0.00 3.59
1218 1290 1.416401 GCATTTATCAGTCCCCCTCGA 59.584 52.381 0.00 0.00 0.00 4.04
1219 1291 1.873903 CGCATTTATCAGTCCCCCTCG 60.874 57.143 0.00 0.00 0.00 4.63
1220 1292 1.543429 CCGCATTTATCAGTCCCCCTC 60.543 57.143 0.00 0.00 0.00 4.30
1221 1293 0.474184 CCGCATTTATCAGTCCCCCT 59.526 55.000 0.00 0.00 0.00 4.79
1222 1294 0.182775 ACCGCATTTATCAGTCCCCC 59.817 55.000 0.00 0.00 0.00 5.40
1223 1295 2.052782 AACCGCATTTATCAGTCCCC 57.947 50.000 0.00 0.00 0.00 4.81
1224 1296 2.876550 GGTAACCGCATTTATCAGTCCC 59.123 50.000 0.00 0.00 0.00 4.46
1225 1297 3.311596 GTGGTAACCGCATTTATCAGTCC 59.688 47.826 0.00 0.00 33.65 3.85
1226 1298 3.000925 CGTGGTAACCGCATTTATCAGTC 59.999 47.826 0.00 0.00 32.88 3.51
1227 1299 2.933906 CGTGGTAACCGCATTTATCAGT 59.066 45.455 0.00 0.00 32.88 3.41
1228 1300 2.286833 CCGTGGTAACCGCATTTATCAG 59.713 50.000 0.00 0.00 32.88 2.90
1229 1301 2.281517 CCGTGGTAACCGCATTTATCA 58.718 47.619 0.00 0.00 32.88 2.15
1230 1302 2.282407 ACCGTGGTAACCGCATTTATC 58.718 47.619 0.00 0.00 32.88 1.75
1231 1303 2.406596 ACCGTGGTAACCGCATTTAT 57.593 45.000 0.00 0.00 32.88 1.40
1232 1304 2.181954 AACCGTGGTAACCGCATTTA 57.818 45.000 0.00 0.00 32.88 1.40
1233 1305 1.805943 GTAACCGTGGTAACCGCATTT 59.194 47.619 0.00 0.00 32.88 2.32
1234 1306 1.441738 GTAACCGTGGTAACCGCATT 58.558 50.000 0.00 0.00 32.88 3.56
1235 1307 0.391528 GGTAACCGTGGTAACCGCAT 60.392 55.000 0.00 0.00 32.88 4.73
1236 1308 1.005156 GGTAACCGTGGTAACCGCA 60.005 57.895 0.00 0.00 32.88 5.69
1237 1309 3.874873 GGTAACCGTGGTAACCGC 58.125 61.111 0.00 0.00 0.00 5.68
1248 1320 6.997239 ATTTCTTGGTATTTCTCGGTAACC 57.003 37.500 0.00 0.00 0.00 2.85
1249 1321 7.254218 CGGTATTTCTTGGTATTTCTCGGTAAC 60.254 40.741 0.00 0.00 0.00 2.50
1250 1322 6.757947 CGGTATTTCTTGGTATTTCTCGGTAA 59.242 38.462 0.00 0.00 0.00 2.85
1251 1323 6.096705 TCGGTATTTCTTGGTATTTCTCGGTA 59.903 38.462 0.00 0.00 0.00 4.02
1252 1324 5.105228 TCGGTATTTCTTGGTATTTCTCGGT 60.105 40.000 0.00 0.00 0.00 4.69
1253 1325 5.353938 TCGGTATTTCTTGGTATTTCTCGG 58.646 41.667 0.00 0.00 0.00 4.63
1254 1326 8.583810 TTATCGGTATTTCTTGGTATTTCTCG 57.416 34.615 0.00 0.00 0.00 4.04
1262 1334 9.550406 TTCGAAATATTATCGGTATTTCTTGGT 57.450 29.630 15.30 0.00 42.35 3.67
1318 1390 9.139174 GGTTCAAATGTTCGTTCATTCAATTAT 57.861 29.630 7.87 0.00 37.09 1.28
1319 1391 8.138074 TGGTTCAAATGTTCGTTCATTCAATTA 58.862 29.630 7.87 0.00 37.09 1.40
1320 1392 6.983307 TGGTTCAAATGTTCGTTCATTCAATT 59.017 30.769 7.87 0.00 37.09 2.32
1321 1393 6.511416 TGGTTCAAATGTTCGTTCATTCAAT 58.489 32.000 7.87 0.00 37.09 2.57
1322 1394 5.895928 TGGTTCAAATGTTCGTTCATTCAA 58.104 33.333 7.87 3.45 37.09 2.69
1323 1395 5.506686 TGGTTCAAATGTTCGTTCATTCA 57.493 34.783 7.87 1.19 37.09 2.57
1324 1396 6.695278 TCTTTGGTTCAAATGTTCGTTCATTC 59.305 34.615 7.87 0.00 37.09 2.67
1325 1397 6.475402 GTCTTTGGTTCAAATGTTCGTTCATT 59.525 34.615 2.99 2.99 39.35 2.57
1326 1398 5.977129 GTCTTTGGTTCAAATGTTCGTTCAT 59.023 36.000 0.00 0.00 32.70 2.57
1327 1399 5.336744 GTCTTTGGTTCAAATGTTCGTTCA 58.663 37.500 0.00 0.00 32.70 3.18
1328 1400 4.738252 GGTCTTTGGTTCAAATGTTCGTTC 59.262 41.667 0.00 0.00 32.70 3.95
1329 1401 4.401202 AGGTCTTTGGTTCAAATGTTCGTT 59.599 37.500 0.00 0.00 32.70 3.85
1330 1402 3.951680 AGGTCTTTGGTTCAAATGTTCGT 59.048 39.130 0.00 0.00 32.70 3.85
1331 1403 4.275936 AGAGGTCTTTGGTTCAAATGTTCG 59.724 41.667 0.00 0.00 32.70 3.95
1332 1404 5.299279 TGAGAGGTCTTTGGTTCAAATGTTC 59.701 40.000 0.00 0.00 32.70 3.18
1333 1405 5.200483 TGAGAGGTCTTTGGTTCAAATGTT 58.800 37.500 0.00 0.00 32.70 2.71
1334 1406 4.792068 TGAGAGGTCTTTGGTTCAAATGT 58.208 39.130 0.00 0.00 32.70 2.71
1335 1407 5.772825 TTGAGAGGTCTTTGGTTCAAATG 57.227 39.130 0.00 0.00 32.70 2.32
1336 1408 6.154363 TGTTTTGAGAGGTCTTTGGTTCAAAT 59.846 34.615 0.00 0.00 35.32 2.32
1337 1409 5.478679 TGTTTTGAGAGGTCTTTGGTTCAAA 59.521 36.000 0.00 0.00 34.00 2.69
1338 1410 5.013547 TGTTTTGAGAGGTCTTTGGTTCAA 58.986 37.500 0.00 0.00 0.00 2.69
1339 1411 4.594970 TGTTTTGAGAGGTCTTTGGTTCA 58.405 39.130 0.00 0.00 0.00 3.18
1340 1412 4.036852 CCTGTTTTGAGAGGTCTTTGGTTC 59.963 45.833 0.00 0.00 0.00 3.62
1341 1413 3.954258 CCTGTTTTGAGAGGTCTTTGGTT 59.046 43.478 0.00 0.00 0.00 3.67
1342 1414 3.202151 TCCTGTTTTGAGAGGTCTTTGGT 59.798 43.478 0.00 0.00 0.00 3.67
1343 1415 3.820557 TCCTGTTTTGAGAGGTCTTTGG 58.179 45.455 0.00 0.00 0.00 3.28
1344 1416 4.884164 AGTTCCTGTTTTGAGAGGTCTTTG 59.116 41.667 0.00 0.00 0.00 2.77
1345 1417 5.117406 AGTTCCTGTTTTGAGAGGTCTTT 57.883 39.130 0.00 0.00 0.00 2.52
1346 1418 4.779993 AGTTCCTGTTTTGAGAGGTCTT 57.220 40.909 0.00 0.00 0.00 3.01
1347 1419 4.284746 CCTAGTTCCTGTTTTGAGAGGTCT 59.715 45.833 0.00 0.00 0.00 3.85
1348 1420 4.040584 ACCTAGTTCCTGTTTTGAGAGGTC 59.959 45.833 0.00 0.00 28.54 3.85
1349 1421 3.974642 ACCTAGTTCCTGTTTTGAGAGGT 59.025 43.478 0.00 0.00 0.00 3.85
1350 1422 4.625607 ACCTAGTTCCTGTTTTGAGAGG 57.374 45.455 0.00 0.00 0.00 3.69
1351 1423 5.278022 GCAAACCTAGTTCCTGTTTTGAGAG 60.278 44.000 0.00 0.00 30.19 3.20
1352 1424 4.578928 GCAAACCTAGTTCCTGTTTTGAGA 59.421 41.667 0.00 0.00 30.19 3.27
1353 1425 4.338118 TGCAAACCTAGTTCCTGTTTTGAG 59.662 41.667 0.00 0.00 30.19 3.02
1354 1426 4.274147 TGCAAACCTAGTTCCTGTTTTGA 58.726 39.130 0.00 0.00 30.19 2.69
1355 1427 4.647424 TGCAAACCTAGTTCCTGTTTTG 57.353 40.909 0.00 0.00 30.19 2.44
1356 1428 5.006153 GTTGCAAACCTAGTTCCTGTTTT 57.994 39.130 0.00 0.00 42.21 2.43
1357 1429 4.649088 GTTGCAAACCTAGTTCCTGTTT 57.351 40.909 0.00 0.00 42.21 2.83
1371 1443 1.669604 TCTAGCGTGTTGGTTGCAAA 58.330 45.000 0.00 0.00 0.00 3.68
1372 1444 1.332375 GTTCTAGCGTGTTGGTTGCAA 59.668 47.619 0.00 0.00 0.00 4.08
1373 1445 0.941542 GTTCTAGCGTGTTGGTTGCA 59.058 50.000 0.00 0.00 0.00 4.08
1374 1446 0.237498 GGTTCTAGCGTGTTGGTTGC 59.763 55.000 0.00 0.00 0.00 4.17
1375 1447 0.872388 GGGTTCTAGCGTGTTGGTTG 59.128 55.000 0.00 0.00 0.00 3.77
1376 1448 0.470766 TGGGTTCTAGCGTGTTGGTT 59.529 50.000 0.00 0.00 0.00 3.67
1377 1449 0.250166 GTGGGTTCTAGCGTGTTGGT 60.250 55.000 0.00 0.00 0.00 3.67
1378 1450 0.034896 AGTGGGTTCTAGCGTGTTGG 59.965 55.000 0.00 0.00 0.00 3.77
1379 1451 1.000955 AGAGTGGGTTCTAGCGTGTTG 59.999 52.381 0.00 0.00 0.00 3.33
1380 1452 1.272769 GAGAGTGGGTTCTAGCGTGTT 59.727 52.381 0.00 0.00 0.00 3.32
1381 1453 0.889306 GAGAGTGGGTTCTAGCGTGT 59.111 55.000 0.00 0.00 0.00 4.49
1382 1454 0.888619 TGAGAGTGGGTTCTAGCGTG 59.111 55.000 0.00 0.00 0.00 5.34
1383 1455 1.478510 CATGAGAGTGGGTTCTAGCGT 59.521 52.381 0.00 0.00 0.00 5.07
1384 1456 1.202463 CCATGAGAGTGGGTTCTAGCG 60.202 57.143 0.00 0.00 35.55 4.26
1385 1457 1.474143 GCCATGAGAGTGGGTTCTAGC 60.474 57.143 0.00 0.00 39.73 3.42
1386 1458 1.833630 TGCCATGAGAGTGGGTTCTAG 59.166 52.381 0.00 0.00 39.73 2.43
1387 1459 1.951209 TGCCATGAGAGTGGGTTCTA 58.049 50.000 0.00 0.00 39.73 2.10
1388 1460 1.293062 ATGCCATGAGAGTGGGTTCT 58.707 50.000 0.00 0.00 39.73 3.01
1389 1461 2.134789 AATGCCATGAGAGTGGGTTC 57.865 50.000 0.00 0.00 39.73 3.62
1390 1462 3.737559 TTAATGCCATGAGAGTGGGTT 57.262 42.857 0.00 0.00 39.73 4.11
1391 1463 3.959495 ATTAATGCCATGAGAGTGGGT 57.041 42.857 0.00 0.00 39.73 4.51
1392 1464 5.624159 TCTAATTAATGCCATGAGAGTGGG 58.376 41.667 0.00 0.00 39.73 4.61
1393 1465 6.373774 GGATCTAATTAATGCCATGAGAGTGG 59.626 42.308 0.00 0.00 42.35 4.00
1394 1466 7.166851 AGGATCTAATTAATGCCATGAGAGTG 58.833 38.462 0.00 0.00 0.00 3.51
1395 1467 7.327064 AGGATCTAATTAATGCCATGAGAGT 57.673 36.000 0.00 0.00 0.00 3.24
1396 1468 8.538701 AGTAGGATCTAATTAATGCCATGAGAG 58.461 37.037 0.00 0.00 0.00 3.20
1397 1469 8.441311 AGTAGGATCTAATTAATGCCATGAGA 57.559 34.615 0.00 0.00 0.00 3.27
1475 1547 1.118356 ATCCCCGCACCAAGCAAAAA 61.118 50.000 0.00 0.00 46.13 1.94
1476 1548 1.118356 AATCCCCGCACCAAGCAAAA 61.118 50.000 0.00 0.00 46.13 2.44
1477 1549 1.118356 AAATCCCCGCACCAAGCAAA 61.118 50.000 0.00 0.00 46.13 3.68
1478 1550 0.251386 TAAATCCCCGCACCAAGCAA 60.251 50.000 0.00 0.00 46.13 3.91
1479 1551 0.963355 GTAAATCCCCGCACCAAGCA 60.963 55.000 0.00 0.00 46.13 3.91
1480 1552 1.663379 GGTAAATCCCCGCACCAAGC 61.663 60.000 0.00 0.00 40.87 4.01
1481 1553 1.373590 CGGTAAATCCCCGCACCAAG 61.374 60.000 0.00 0.00 38.85 3.61
1482 1554 1.377463 CGGTAAATCCCCGCACCAA 60.377 57.895 0.00 0.00 38.85 3.67
1483 1555 2.246761 CTCGGTAAATCCCCGCACCA 62.247 60.000 0.00 0.00 45.09 4.17
1484 1556 1.523032 CTCGGTAAATCCCCGCACC 60.523 63.158 0.00 0.00 45.09 5.01
1485 1557 0.529992 CTCTCGGTAAATCCCCGCAC 60.530 60.000 0.00 0.00 45.09 5.34
1486 1558 1.682451 CCTCTCGGTAAATCCCCGCA 61.682 60.000 0.00 0.00 45.09 5.69
1487 1559 1.069258 CCTCTCGGTAAATCCCCGC 59.931 63.158 0.00 0.00 45.09 6.13
1488 1560 1.069258 GCCTCTCGGTAAATCCCCG 59.931 63.158 0.00 0.00 46.83 5.73
1489 1561 1.069258 CGCCTCTCGGTAAATCCCC 59.931 63.158 0.00 0.00 33.78 4.81
1490 1562 1.594564 GCGCCTCTCGGTAAATCCC 60.595 63.158 0.00 0.00 38.94 3.85
1491 1563 1.949631 CGCGCCTCTCGGTAAATCC 60.950 63.158 0.00 0.00 38.94 3.01
1492 1564 1.949631 CCGCGCCTCTCGGTAAATC 60.950 63.158 0.00 0.00 41.85 2.17
1493 1565 1.952102 TTCCGCGCCTCTCGGTAAAT 61.952 55.000 0.00 0.00 46.49 1.40
1494 1566 2.157305 TTTCCGCGCCTCTCGGTAAA 62.157 55.000 0.00 0.00 46.49 2.01
1495 1567 1.952102 ATTTCCGCGCCTCTCGGTAA 61.952 55.000 0.00 0.00 46.49 2.85
1496 1568 1.102809 TATTTCCGCGCCTCTCGGTA 61.103 55.000 0.00 0.00 46.49 4.02
1497 1569 2.420568 TATTTCCGCGCCTCTCGGT 61.421 57.895 0.00 0.00 46.49 4.69
1499 1571 2.293627 CGTATTTCCGCGCCTCTCG 61.294 63.158 0.00 0.00 42.12 4.04
1500 1572 2.586773 GCGTATTTCCGCGCCTCTC 61.587 63.158 0.00 0.00 46.93 3.20
1501 1573 2.585247 GCGTATTTCCGCGCCTCT 60.585 61.111 0.00 0.00 46.93 3.69
1508 1580 1.259507 CATGGTTACCGCGTATTTCCG 59.740 52.381 4.92 0.00 0.00 4.30
1509 1581 1.600485 CCATGGTTACCGCGTATTTCC 59.400 52.381 4.92 1.35 0.00 3.13
1510 1582 1.600485 CCCATGGTTACCGCGTATTTC 59.400 52.381 11.73 0.00 0.00 2.17
1511 1583 1.209990 TCCCATGGTTACCGCGTATTT 59.790 47.619 11.73 0.00 0.00 1.40
1512 1584 0.831966 TCCCATGGTTACCGCGTATT 59.168 50.000 11.73 0.00 0.00 1.89
1513 1585 0.831966 TTCCCATGGTTACCGCGTAT 59.168 50.000 11.73 0.00 0.00 3.06
1514 1586 0.612229 TTTCCCATGGTTACCGCGTA 59.388 50.000 11.73 0.00 0.00 4.42
1515 1587 0.034863 ATTTCCCATGGTTACCGCGT 60.035 50.000 11.73 0.00 0.00 6.01
1516 1588 0.661020 GATTTCCCATGGTTACCGCG 59.339 55.000 11.73 0.00 0.00 6.46
1517 1589 1.947456 GAGATTTCCCATGGTTACCGC 59.053 52.381 11.73 0.00 0.00 5.68
1518 1590 2.159014 TCGAGATTTCCCATGGTTACCG 60.159 50.000 11.73 5.01 0.00 4.02
1519 1591 3.553828 TCGAGATTTCCCATGGTTACC 57.446 47.619 11.73 0.00 0.00 2.85
1520 1592 6.451064 AATTTCGAGATTTCCCATGGTTAC 57.549 37.500 11.73 0.00 0.00 2.50
1521 1593 7.095695 GAAATTTCGAGATTTCCCATGGTTA 57.904 36.000 23.99 0.00 39.16 2.85
1522 1594 5.965922 GAAATTTCGAGATTTCCCATGGTT 58.034 37.500 23.99 0.00 39.16 3.67
1523 1595 5.582689 GAAATTTCGAGATTTCCCATGGT 57.417 39.130 23.99 0.00 39.16 3.55
1533 1605 7.041644 TTTGGTTACAAGTCGAAATTTCGAGAT 60.042 33.333 36.46 26.69 45.18 2.75
1534 1606 6.258287 TTTGGTTACAAGTCGAAATTTCGAGA 59.742 34.615 36.46 18.93 45.18 4.04
1535 1607 6.423862 TTTGGTTACAAGTCGAAATTTCGAG 58.576 36.000 36.46 27.82 45.18 4.04
1536 1608 6.360844 TTTGGTTACAAGTCGAAATTTCGA 57.639 33.333 33.33 33.33 46.23 3.71
1537 1609 6.075257 GGTTTTGGTTACAAGTCGAAATTTCG 60.075 38.462 30.11 30.11 43.80 3.46
1538 1610 6.976349 AGGTTTTGGTTACAAGTCGAAATTTC 59.024 34.615 8.20 8.20 37.97 2.17
1539 1611 6.869695 AGGTTTTGGTTACAAGTCGAAATTT 58.130 32.000 0.00 0.00 37.97 1.82
1540 1612 6.459670 AGGTTTTGGTTACAAGTCGAAATT 57.540 33.333 0.00 0.00 37.97 1.82
1541 1613 6.270064 CAAGGTTTTGGTTACAAGTCGAAAT 58.730 36.000 0.00 0.00 37.97 2.17
1542 1614 5.642686 CAAGGTTTTGGTTACAAGTCGAAA 58.357 37.500 0.00 0.00 37.97 3.46
1543 1615 4.439016 GCAAGGTTTTGGTTACAAGTCGAA 60.439 41.667 0.00 0.00 37.97 3.71
1544 1616 3.065648 GCAAGGTTTTGGTTACAAGTCGA 59.934 43.478 0.00 0.00 37.97 4.20
1545 1617 3.368495 GCAAGGTTTTGGTTACAAGTCG 58.632 45.455 0.00 0.00 37.97 4.18
1546 1618 3.491964 GGGCAAGGTTTTGGTTACAAGTC 60.492 47.826 0.00 0.00 37.97 3.01
1547 1619 2.432874 GGGCAAGGTTTTGGTTACAAGT 59.567 45.455 0.00 0.00 37.97 3.16
1548 1620 2.224185 GGGGCAAGGTTTTGGTTACAAG 60.224 50.000 0.00 0.00 37.97 3.16
1549 1621 1.763545 GGGGCAAGGTTTTGGTTACAA 59.236 47.619 0.00 0.00 34.79 2.41
1550 1622 1.415200 GGGGCAAGGTTTTGGTTACA 58.585 50.000 0.00 0.00 34.79 2.41
1551 1623 0.315886 CGGGGCAAGGTTTTGGTTAC 59.684 55.000 0.00 0.00 34.79 2.50
1552 1624 0.828343 CCGGGGCAAGGTTTTGGTTA 60.828 55.000 0.00 0.00 34.79 2.85
1553 1625 2.137528 CCGGGGCAAGGTTTTGGTT 61.138 57.895 0.00 0.00 34.79 3.67
1554 1626 2.380571 ATCCGGGGCAAGGTTTTGGT 62.381 55.000 0.00 0.00 34.79 3.67
1555 1627 0.323908 TATCCGGGGCAAGGTTTTGG 60.324 55.000 0.00 0.00 34.79 3.28
1556 1628 0.815095 GTATCCGGGGCAAGGTTTTG 59.185 55.000 0.00 0.00 37.36 2.44
1557 1629 0.406361 TGTATCCGGGGCAAGGTTTT 59.594 50.000 0.00 0.00 0.00 2.43
1558 1630 0.034477 CTGTATCCGGGGCAAGGTTT 60.034 55.000 0.00 0.00 0.00 3.27
1559 1631 1.205460 ACTGTATCCGGGGCAAGGTT 61.205 55.000 0.00 0.00 0.00 3.50
1560 1632 1.615424 ACTGTATCCGGGGCAAGGT 60.615 57.895 0.00 0.00 0.00 3.50
1561 1633 1.146263 GACTGTATCCGGGGCAAGG 59.854 63.158 0.00 0.00 0.00 3.61
1562 1634 0.469917 ATGACTGTATCCGGGGCAAG 59.530 55.000 0.00 0.00 0.00 4.01
1563 1635 0.180171 CATGACTGTATCCGGGGCAA 59.820 55.000 0.00 0.00 0.00 4.52
1564 1636 1.829456 CATGACTGTATCCGGGGCA 59.171 57.895 0.00 0.00 0.00 5.36
1573 1645 3.027412 GAGGGAGAAGAGCATGACTGTA 58.973 50.000 0.00 0.00 0.00 2.74
1576 1648 2.387757 GAGAGGGAGAAGAGCATGACT 58.612 52.381 0.00 0.00 0.00 3.41
1581 1653 1.380515 CCGGAGAGGGAGAAGAGCA 60.381 63.158 0.00 0.00 35.97 4.26
1858 2232 3.770040 CTCATCGTCACGGGGCCA 61.770 66.667 4.39 0.00 0.00 5.36
1931 2305 1.541889 CGTGATCAGCATGGCTATGGT 60.542 52.381 9.17 9.17 45.38 3.55
1994 2368 3.630013 TGCAAGCCTCCACGAGCT 61.630 61.111 0.00 0.00 42.40 4.09
2163 2773 0.740868 CGAACATGGTGTCGGCATCT 60.741 55.000 0.21 0.00 0.00 2.90
2190 2818 2.441822 GAAGTGCTGGCTCGACCACT 62.442 60.000 3.02 0.00 46.36 4.00
2217 2845 4.973055 TTGTTCGTGTCGGCCGGG 62.973 66.667 27.83 12.63 0.00 5.73
2589 7092 6.549242 AGCAAGGGAATCAATCATGATATCA 58.451 36.000 9.04 8.10 45.60 2.15
2632 7135 9.740710 ACTATTTAGATTTAGCTTCAACCTTGT 57.259 29.630 0.00 0.00 0.00 3.16
2687 7190 9.961265 ACATATCTCGTGTATAGATTCGAAAAA 57.039 29.630 0.00 0.00 35.36 1.94
2688 7191 9.961265 AACATATCTCGTGTATAGATTCGAAAA 57.039 29.630 0.00 0.00 35.36 2.29
2689 7192 9.961265 AAACATATCTCGTGTATAGATTCGAAA 57.039 29.630 0.00 0.00 35.36 3.46
2690 7193 9.961265 AAAACATATCTCGTGTATAGATTCGAA 57.039 29.630 0.00 0.00 35.36 3.71
2691 7194 9.961265 AAAAACATATCTCGTGTATAGATTCGA 57.039 29.630 0.00 0.00 35.36 3.71
2906 10273 9.822727 AAGACTTTAATATCCCTTTCCTCAAAA 57.177 29.630 0.00 0.00 0.00 2.44
2910 10277 6.263392 GGCAAGACTTTAATATCCCTTTCCTC 59.737 42.308 0.00 0.00 0.00 3.71
3097 10464 7.014038 AGCAATGGTGATCTTTAATCAGATTCC 59.986 37.037 0.00 0.00 33.36 3.01
3146 10515 1.447663 CACGCATCCACATCGACCA 60.448 57.895 0.00 0.00 0.00 4.02
3165 10534 2.433491 CCGTCACCGCCGAATGAA 60.433 61.111 0.00 0.00 0.00 2.57
3215 10587 2.563427 GCCAGAGCGCAAAACCTC 59.437 61.111 11.47 0.00 0.00 3.85
3234 10606 0.597377 CAAGCGGCCCAAAGAAACAC 60.597 55.000 0.00 0.00 0.00 3.32
3285 10657 7.776030 ACCCGACAATACCATCAAAATACATTA 59.224 33.333 0.00 0.00 0.00 1.90
3298 10670 1.619827 ACTCGAAACCCGACAATACCA 59.380 47.619 0.00 0.00 43.23 3.25
3391 10763 3.829601 CAGATAGGCGTCTTTCTATCCCT 59.170 47.826 9.74 0.00 41.47 4.20
3516 10888 7.172532 TCTCAAGATTTACAACTACAAACGCAT 59.827 33.333 0.00 0.00 0.00 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.