Multiple sequence alignment - TraesCS2B01G621000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G621000 chr2B 100.000 7757 0 0 1 7757 795072322 795064566 0.000000e+00 14325.0
1 TraesCS2B01G621000 chr2D 91.170 7033 402 89 814 7757 637658577 637651675 0.000000e+00 9345.0
2 TraesCS2B01G621000 chr2D 84.656 378 21 21 19 381 637659475 637659120 7.450000e-90 342.0
3 TraesCS2B01G621000 chr2D 95.181 83 3 1 7536 7617 598020679 598020597 6.320000e-26 130.0
4 TraesCS2B01G621000 chr2D 93.976 83 4 1 7536 7617 598048870 598048788 2.940000e-24 124.0
5 TraesCS2B01G621000 chr2D 86.420 81 10 1 102 182 637668694 637668615 3.860000e-13 87.9
6 TraesCS2B01G621000 chr2A 90.295 7058 425 82 815 7757 762284790 762291702 0.000000e+00 8999.0
7 TraesCS2B01G621000 chr2A 94.611 167 9 0 2141 2307 739297639 739297805 7.720000e-65 259.0
8 TraesCS2B01G621000 chr2A 85.799 169 15 6 19 183 762284124 762284287 3.720000e-38 171.0
9 TraesCS2B01G621000 chr7A 78.509 1033 186 28 5617 6641 472572748 472571744 0.000000e+00 645.0
10 TraesCS2B01G621000 chr7A 95.210 167 8 0 2141 2307 643671894 643672060 1.660000e-66 265.0
11 TraesCS2B01G621000 chr7A 94.012 167 10 0 2141 2307 701614706 701614872 3.590000e-63 254.0
12 TraesCS2B01G621000 chr7D 78.316 1033 190 29 5617 6641 411610597 411609591 3.050000e-178 636.0
13 TraesCS2B01G621000 chr7B 78.261 1035 186 31 5617 6641 426114938 426113933 5.110000e-176 628.0
14 TraesCS2B01G621000 chr7B 94.611 167 9 0 2141 2307 60951 60785 7.720000e-65 259.0
15 TraesCS2B01G621000 chr6A 94.012 167 10 0 2141 2307 606527625 606527459 3.590000e-63 254.0
16 TraesCS2B01G621000 chr3A 94.012 167 10 0 2141 2307 29047828 29047994 3.590000e-63 254.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G621000 chr2B 795064566 795072322 7756 True 14325.0 14325 100.000 1 7757 1 chr2B.!!$R1 7756
1 TraesCS2B01G621000 chr2D 637651675 637659475 7800 True 4843.5 9345 87.913 19 7757 2 chr2D.!!$R4 7738
2 TraesCS2B01G621000 chr2A 762284124 762291702 7578 False 4585.0 8999 88.047 19 7757 2 chr2A.!!$F2 7738
3 TraesCS2B01G621000 chr7A 472571744 472572748 1004 True 645.0 645 78.509 5617 6641 1 chr7A.!!$R1 1024
4 TraesCS2B01G621000 chr7D 411609591 411610597 1006 True 636.0 636 78.316 5617 6641 1 chr7D.!!$R1 1024
5 TraesCS2B01G621000 chr7B 426113933 426114938 1005 True 628.0 628 78.261 5617 6641 1 chr7B.!!$R2 1024

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 515 0.039708 GCTGCTGCTTGTTCCAACTC 60.040 55.0 8.53 0.00 36.03 3.01 F
1398 1623 0.025898 GATGATGACGACGACGACGA 59.974 55.0 25.15 5.17 42.66 4.20 F
1401 1626 0.025898 GATGACGACGACGACGATGA 59.974 55.0 25.15 9.20 42.66 2.92 F
1798 2023 0.310854 TGATCGACACCGGATCATCG 59.689 55.0 9.46 11.75 36.24 3.84 F
1799 2024 0.311165 GATCGACACCGGATCATCGT 59.689 55.0 9.46 2.67 36.03 3.73 F
3224 3524 0.400594 GGAACACAGCACCCCTTACT 59.599 55.0 0.00 0.00 0.00 2.24 F
4252 4570 0.389025 CAAGCCACAACAAACCCTCC 59.611 55.0 0.00 0.00 0.00 4.30 F
5207 5535 0.031616 AGAGATGGGTCTGGAGTCCC 60.032 60.0 6.74 2.24 42.66 4.46 F
5745 6073 1.016627 GCTTGCATATGTCGCTTCCA 58.983 50.0 4.29 0.00 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2362 2609 0.034896 GCTCCTCCGTGACCTTTTCA 59.965 55.0 0.00 0.00 0.00 2.69 R
2373 2620 0.469917 ACCACCATTATGCTCCTCCG 59.530 55.0 0.00 0.00 0.00 4.63 R
2871 3141 0.690762 GGTTCTACTTGCACCCTCCA 59.309 55.0 0.00 0.00 0.00 3.86 R
3624 3924 0.111061 TTTGTGCAGCTGACAGGGAT 59.889 50.0 20.43 0.00 0.00 3.85 R
3625 3925 0.111061 ATTTGTGCAGCTGACAGGGA 59.889 50.0 20.43 9.14 0.00 4.20 R
4707 5026 0.324368 TGCACCGAGGACCTAGACAT 60.324 55.0 2.68 0.00 0.00 3.06 R
5503 5831 0.608640 TGAAGAGGCGGAAGAGGAAC 59.391 55.0 0.00 0.00 0.00 3.62 R
6255 6600 0.449388 CCCGCTGCAAGAGATGTTTC 59.551 55.0 0.00 0.00 34.81 2.78 R
7284 7642 0.237498 GTTGTACTCGGGCAAACTGC 59.763 55.0 0.00 0.00 44.08 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 4.723309 AGAGGCACACAAGAAAGAAAGAT 58.277 39.130 0.00 0.00 0.00 2.40
57 58 5.136105 AGAGGCACACAAGAAAGAAAGATT 58.864 37.500 0.00 0.00 0.00 2.40
86 97 6.727569 TTGTAGTACAAAATCGATCGATCG 57.272 37.500 35.91 35.91 42.29 3.69
120 131 3.350612 TTTGAGTTTCCGGCGCCG 61.351 61.111 41.00 41.00 39.44 6.46
186 197 1.333636 TTGGTTTGGGTGGTTGCCTG 61.334 55.000 0.00 0.00 0.00 4.85
187 198 2.506957 GGTTTGGGTGGTTGCCTGG 61.507 63.158 0.00 0.00 0.00 4.45
188 199 1.760480 GTTTGGGTGGTTGCCTGGT 60.760 57.895 0.00 0.00 0.00 4.00
189 200 1.002274 TTTGGGTGGTTGCCTGGTT 59.998 52.632 0.00 0.00 0.00 3.67
190 201 0.618968 TTTGGGTGGTTGCCTGGTTT 60.619 50.000 0.00 0.00 0.00 3.27
191 202 1.333636 TTGGGTGGTTGCCTGGTTTG 61.334 55.000 0.00 0.00 0.00 2.93
211 222 0.883833 GGTTGGGTGATTGTCAGCTG 59.116 55.000 7.63 7.63 43.82 4.24
214 225 0.325933 TGGGTGATTGTCAGCTGAGG 59.674 55.000 18.89 0.00 43.82 3.86
215 226 0.393537 GGGTGATTGTCAGCTGAGGG 60.394 60.000 18.89 0.00 43.82 4.30
217 228 0.393537 GTGATTGTCAGCTGAGGGGG 60.394 60.000 18.89 0.00 0.00 5.40
218 229 0.547471 TGATTGTCAGCTGAGGGGGA 60.547 55.000 18.89 1.62 0.00 4.81
219 230 0.179936 GATTGTCAGCTGAGGGGGAG 59.820 60.000 18.89 0.00 0.00 4.30
221 232 2.284995 GTCAGCTGAGGGGGAGGT 60.285 66.667 18.89 0.00 0.00 3.85
222 233 2.284921 TCAGCTGAGGGGGAGGTG 60.285 66.667 13.74 0.00 39.76 4.00
223 234 2.284921 CAGCTGAGGGGGAGGTGA 60.285 66.667 8.42 0.00 40.66 4.02
224 235 2.284995 AGCTGAGGGGGAGGTGAC 60.285 66.667 0.00 0.00 0.00 3.67
237 258 4.223514 GTGACGAGACACCGACAC 57.776 61.111 0.00 0.00 44.46 3.67
238 259 1.724929 GTGACGAGACACCGACACG 60.725 63.158 0.00 0.00 42.72 4.49
240 261 1.232621 TGACGAGACACCGACACGAT 61.233 55.000 0.00 0.00 30.29 3.73
241 262 0.520827 GACGAGACACCGACACGATC 60.521 60.000 0.00 0.00 0.00 3.69
259 282 2.417936 GAGTAGCTACCGGCCAGC 59.582 66.667 20.31 18.60 43.05 4.85
273 296 4.567385 CAGCCTCCGCTCGCTCTC 62.567 72.222 0.00 0.00 43.95 3.20
274 297 4.813235 AGCCTCCGCTCGCTCTCT 62.813 66.667 0.00 0.00 43.95 3.10
287 310 0.462759 GCTCTCTTGGATTGGACGGG 60.463 60.000 0.00 0.00 0.00 5.28
290 313 2.500098 CTCTCTTGGATTGGACGGGTTA 59.500 50.000 0.00 0.00 0.00 2.85
312 335 2.780714 TCGTCGTCTTCTTCTTCTCCT 58.219 47.619 0.00 0.00 0.00 3.69
313 336 2.484651 TCGTCGTCTTCTTCTTCTCCTG 59.515 50.000 0.00 0.00 0.00 3.86
360 397 1.183030 TTGCTCCATTGCTGCTGCTT 61.183 50.000 17.00 1.52 40.48 3.91
389 451 2.379972 TCCATCTCCGTCTTCTTCTCC 58.620 52.381 0.00 0.00 0.00 3.71
395 457 1.139947 CGTCTTCTTCTCCCTCGCC 59.860 63.158 0.00 0.00 0.00 5.54
397 459 2.052690 TCTTCTTCTCCCTCGCCGG 61.053 63.158 0.00 0.00 0.00 6.13
398 460 3.724914 CTTCTTCTCCCTCGCCGGC 62.725 68.421 19.07 19.07 0.00 6.13
408 470 3.133767 CTCGCCGGCGACAATCCTA 62.134 63.158 45.37 24.25 44.01 2.94
411 473 2.499205 CCGGCGACAATCCTAGCA 59.501 61.111 9.30 0.00 0.00 3.49
413 475 1.437573 CGGCGACAATCCTAGCAGA 59.562 57.895 0.00 0.00 0.00 4.26
415 477 0.530870 GGCGACAATCCTAGCAGACC 60.531 60.000 0.00 0.00 0.00 3.85
417 479 1.804372 GCGACAATCCTAGCAGACCAG 60.804 57.143 0.00 0.00 0.00 4.00
419 481 2.363680 CGACAATCCTAGCAGACCAGAT 59.636 50.000 0.00 0.00 0.00 2.90
444 506 2.437180 TCCATCGGCTGCTGCTTG 60.437 61.111 15.64 10.39 39.59 4.01
445 507 2.749044 CCATCGGCTGCTGCTTGT 60.749 61.111 15.64 0.00 39.59 3.16
446 508 2.338015 CCATCGGCTGCTGCTTGTT 61.338 57.895 15.64 1.36 39.59 2.83
447 509 1.136147 CATCGGCTGCTGCTTGTTC 59.864 57.895 15.64 0.00 39.59 3.18
449 511 2.753009 ATCGGCTGCTGCTTGTTCCA 62.753 55.000 15.64 0.00 39.59 3.53
450 512 2.554636 CGGCTGCTGCTTGTTCCAA 61.555 57.895 15.64 0.00 39.59 3.53
451 513 1.006922 GGCTGCTGCTTGTTCCAAC 60.007 57.895 15.64 0.00 39.59 3.77
452 514 1.458639 GGCTGCTGCTTGTTCCAACT 61.459 55.000 15.64 0.00 39.59 3.16
453 515 0.039708 GCTGCTGCTTGTTCCAACTC 60.040 55.000 8.53 0.00 36.03 3.01
455 517 1.165907 TGCTGCTTGTTCCAACTCCG 61.166 55.000 0.00 0.00 0.00 4.63
456 518 1.856265 GCTGCTTGTTCCAACTCCGG 61.856 60.000 0.00 0.00 0.00 5.14
458 520 1.600916 GCTTGTTCCAACTCCGGCT 60.601 57.895 0.00 0.00 0.00 5.52
459 521 1.578206 GCTTGTTCCAACTCCGGCTC 61.578 60.000 0.00 0.00 0.00 4.70
461 523 2.434359 GTTCCAACTCCGGCTCCG 60.434 66.667 0.00 0.48 39.44 4.63
496 558 1.488261 GGCGACGACGATCCCATTTC 61.488 60.000 12.29 0.00 42.66 2.17
503 565 2.088950 ACGATCCCATTTCGTTTCGT 57.911 45.000 0.00 0.00 46.96 3.85
520 582 5.113383 GTTTCGTTTCCCCTTGTGATTTTT 58.887 37.500 0.00 0.00 0.00 1.94
529 591 2.562738 CCTTGTGATTTTTGGTCCTCCC 59.437 50.000 0.00 0.00 0.00 4.30
547 643 2.203337 AGGCGACCAAGCTGCAAA 60.203 55.556 1.02 0.00 37.29 3.68
549 645 2.256461 GCGACCAAGCTGCAAAGG 59.744 61.111 1.02 2.76 0.00 3.11
561 657 2.878406 GCTGCAAAGGTGAGTAAGTTCA 59.122 45.455 0.00 0.00 0.00 3.18
566 662 4.393371 GCAAAGGTGAGTAAGTTCATCTCC 59.607 45.833 0.00 1.80 37.56 3.71
567 663 4.457834 AAGGTGAGTAAGTTCATCTCCG 57.542 45.455 0.00 0.00 37.56 4.63
568 664 2.166664 AGGTGAGTAAGTTCATCTCCGC 59.833 50.000 0.00 0.00 33.25 5.54
571 667 0.179108 AGTAAGTTCATCTCCGCGCC 60.179 55.000 0.00 0.00 0.00 6.53
572 668 0.459585 GTAAGTTCATCTCCGCGCCA 60.460 55.000 0.00 0.00 0.00 5.69
573 669 0.179111 TAAGTTCATCTCCGCGCCAG 60.179 55.000 0.00 0.00 0.00 4.85
574 670 3.567797 GTTCATCTCCGCGCCAGC 61.568 66.667 0.00 0.00 40.74 4.85
575 671 4.081185 TTCATCTCCGCGCCAGCA 62.081 61.111 0.00 0.00 45.49 4.41
577 673 4.827087 CATCTCCGCGCCAGCACT 62.827 66.667 0.00 0.00 45.49 4.40
578 674 4.087892 ATCTCCGCGCCAGCACTT 62.088 61.111 0.00 0.00 45.49 3.16
579 675 4.742201 TCTCCGCGCCAGCACTTC 62.742 66.667 0.00 0.00 45.49 3.01
658 809 5.293814 ACTGAATCAATTGAATCTCTCGCTG 59.706 40.000 21.18 4.58 0.00 5.18
661 812 6.988580 TGAATCAATTGAATCTCTCGCTGTAT 59.011 34.615 21.18 0.00 0.00 2.29
662 813 7.170489 TGAATCAATTGAATCTCTCGCTGTATC 59.830 37.037 21.18 0.00 0.00 2.24
664 815 6.340522 TCAATTGAATCTCTCGCTGTATCAA 58.659 36.000 5.45 0.00 0.00 2.57
669 820 5.105351 TGAATCTCTCGCTGTATCAAGGAAA 60.105 40.000 0.00 0.00 0.00 3.13
678 829 5.967674 CGCTGTATCAAGGAAAAATGATGAC 59.032 40.000 0.00 0.00 36.93 3.06
681 832 7.646922 GCTGTATCAAGGAAAAATGATGACATC 59.353 37.037 8.59 8.59 36.93 3.06
682 833 7.999679 TGTATCAAGGAAAAATGATGACATCC 58.000 34.615 12.90 0.00 36.93 3.51
683 834 7.614974 TGTATCAAGGAAAAATGATGACATCCA 59.385 33.333 12.90 1.88 36.93 3.41
702 859 6.836007 ACATCCATTTCCTCCCTCTTAATTTC 59.164 38.462 0.00 0.00 0.00 2.17
755 918 8.400184 TGAATGAATATGATGAACATTCCTCC 57.600 34.615 0.00 0.00 43.14 4.30
766 929 4.400251 TGAACATTCCTCCAATTCAGATGC 59.600 41.667 0.00 0.00 0.00 3.91
778 945 3.459232 TTCAGATGCAGTAATCCCTCG 57.541 47.619 0.00 0.00 0.00 4.63
782 949 0.759346 ATGCAGTAATCCCTCGACCC 59.241 55.000 0.00 0.00 0.00 4.46
796 963 0.392863 CGACCCCATCAACTGCATCA 60.393 55.000 0.00 0.00 0.00 3.07
809 976 1.400846 CTGCATCAATCACCACTGCTC 59.599 52.381 0.00 0.00 34.02 4.26
810 977 0.737219 GCATCAATCACCACTGCTCC 59.263 55.000 0.00 0.00 0.00 4.70
811 978 1.681166 GCATCAATCACCACTGCTCCT 60.681 52.381 0.00 0.00 0.00 3.69
812 979 2.286872 CATCAATCACCACTGCTCCTC 58.713 52.381 0.00 0.00 0.00 3.71
823 1020 1.944024 ACTGCTCCTCTAGTCGATTCG 59.056 52.381 0.00 0.00 0.00 3.34
829 1026 4.778904 CTCCTCTAGTCGATTCGTTCATC 58.221 47.826 5.89 0.00 0.00 2.92
843 1040 6.544038 TTCGTTCATCCGTATCGATAACTA 57.456 37.500 6.72 0.00 0.00 2.24
844 1041 5.920312 TCGTTCATCCGTATCGATAACTAC 58.080 41.667 6.72 0.00 0.00 2.73
849 1046 7.741027 TCATCCGTATCGATAACTACTCTTT 57.259 36.000 6.72 0.00 0.00 2.52
943 1162 3.363787 TCAGCCTGCTGACTGACTA 57.636 52.632 17.46 0.00 46.80 2.59
951 1170 3.056250 CCTGCTGACTGACTAACTGACAT 60.056 47.826 0.00 0.00 0.00 3.06
953 1172 5.060662 TGCTGACTGACTAACTGACATAC 57.939 43.478 0.00 0.00 0.00 2.39
956 1175 5.518128 GCTGACTGACTAACTGACATACATG 59.482 44.000 0.00 0.00 0.00 3.21
957 1176 5.410924 TGACTGACTAACTGACATACATGC 58.589 41.667 0.00 0.00 0.00 4.06
959 1178 5.171476 ACTGACTAACTGACATACATGCAC 58.829 41.667 0.00 0.00 0.00 4.57
961 1180 5.546526 TGACTAACTGACATACATGCACAA 58.453 37.500 0.00 0.00 0.00 3.33
970 1189 0.897863 TACATGCACAACAAGGGGGC 60.898 55.000 0.00 0.00 0.00 5.80
973 1192 2.604382 GCACAACAAGGGGGCCAT 60.604 61.111 4.39 0.00 0.00 4.40
1005 1224 8.682128 TTAATTTCAGTAATTTCGCCATGAAC 57.318 30.769 0.00 0.00 37.60 3.18
1014 1233 4.837896 TTTCGCCATGAACAACAATACA 57.162 36.364 0.00 0.00 35.97 2.29
1040 1259 3.289834 CACCACCAGCACCAGCAC 61.290 66.667 0.00 0.00 45.49 4.40
1041 1260 4.586235 ACCACCAGCACCAGCACC 62.586 66.667 0.00 0.00 45.49 5.01
1042 1261 4.584518 CCACCAGCACCAGCACCA 62.585 66.667 0.00 0.00 45.49 4.17
1052 1271 0.036010 ACCAGCACCAGCAGTATCAC 60.036 55.000 0.00 0.00 45.49 3.06
1082 1301 3.748568 GTGTGTCTGTCATCTCCTTTTCC 59.251 47.826 0.00 0.00 0.00 3.13
1083 1302 3.244561 TGTGTCTGTCATCTCCTTTTCCC 60.245 47.826 0.00 0.00 0.00 3.97
1084 1303 3.008485 GTGTCTGTCATCTCCTTTTCCCT 59.992 47.826 0.00 0.00 0.00 4.20
1104 1323 1.061424 TCCTCCTAATCCTGCATCCCA 60.061 52.381 0.00 0.00 0.00 4.37
1105 1324 1.991070 CCTCCTAATCCTGCATCCCAT 59.009 52.381 0.00 0.00 0.00 4.00
1106 1325 2.026449 CCTCCTAATCCTGCATCCCATC 60.026 54.545 0.00 0.00 0.00 3.51
1115 1337 1.277557 CTGCATCCCATCCCTAGTAGC 59.722 57.143 0.00 0.00 0.00 3.58
1124 1346 6.277825 TCCCATCCCTAGTAGCTACTCTATA 58.722 44.000 29.28 14.37 37.73 1.31
1125 1347 6.915413 TCCCATCCCTAGTAGCTACTCTATAT 59.085 42.308 29.28 15.87 37.73 0.86
1126 1348 8.078777 TCCCATCCCTAGTAGCTACTCTATATA 58.921 40.741 29.28 10.48 37.73 0.86
1127 1349 8.896658 CCCATCCCTAGTAGCTACTCTATATAT 58.103 40.741 29.28 13.60 37.73 0.86
1142 1364 8.554490 ACTCTATATATGTTTGGTTCTGAGGT 57.446 34.615 0.00 0.00 0.00 3.85
1145 1367 9.159254 TCTATATATGTTTGGTTCTGAGGTGAT 57.841 33.333 0.00 0.00 0.00 3.06
1177 1402 7.232330 ACATGTATCTGTATCTGTATCTGCTGT 59.768 37.037 0.00 0.00 0.00 4.40
1248 1473 4.097863 GGCGTACCAAGCAACCGC 62.098 66.667 0.00 0.00 43.35 5.68
1255 1480 2.652530 CAAGCAACCGCCAAGCAT 59.347 55.556 0.00 0.00 39.83 3.79
1256 1481 1.735198 CAAGCAACCGCCAAGCATG 60.735 57.895 0.00 0.00 39.83 4.06
1287 1512 2.240612 GACGGTGCCGCTGAATTCAC 62.241 60.000 10.87 1.14 44.19 3.18
1288 1513 2.877691 GGTGCCGCTGAATTCACC 59.122 61.111 3.38 0.00 41.66 4.02
1289 1514 2.480555 GTGCCGCTGAATTCACCG 59.519 61.111 14.84 14.84 0.00 4.94
1290 1515 2.745884 TGCCGCTGAATTCACCGG 60.746 61.111 29.76 29.76 45.32 5.28
1294 1519 4.179579 GCTGAATTCACCGGCGCC 62.180 66.667 19.07 19.07 0.00 6.53
1318 1543 2.436646 GGTGATGCCGTCTGGGTG 60.437 66.667 0.00 0.00 38.44 4.61
1354 1579 3.627123 CCAGCAACGATGATGATACCAAA 59.373 43.478 12.88 0.00 45.81 3.28
1396 1621 2.037649 GATGATGATGACGACGACGAC 58.962 52.381 15.32 8.68 42.66 4.34
1397 1622 0.247537 TGATGATGACGACGACGACG 60.248 55.000 17.60 17.60 42.66 5.12
1398 1623 0.025898 GATGATGACGACGACGACGA 59.974 55.000 25.15 5.17 42.66 4.20
1399 1624 0.656259 ATGATGACGACGACGACGAT 59.344 50.000 25.15 9.92 42.66 3.73
1400 1625 0.247537 TGATGACGACGACGACGATG 60.248 55.000 25.15 8.06 42.66 3.84
1401 1626 0.025898 GATGACGACGACGACGATGA 59.974 55.000 25.15 9.20 42.66 2.92
1474 1699 3.541713 CCCAGCCCGAGTCCTAGC 61.542 72.222 0.00 0.00 0.00 3.42
1486 1711 2.122636 CCTAGCCCCAGGGAGGAG 60.123 72.222 7.25 0.00 41.22 3.69
1518 1743 0.395311 ATGCTCAAGGCCATGGACAG 60.395 55.000 22.78 12.48 40.92 3.51
1555 1780 3.073101 ACCCGGTTCCTAGCGTCC 61.073 66.667 0.00 0.00 43.43 4.79
1558 1783 4.867599 CGGTTCCTAGCGTCCGCC 62.868 72.222 8.23 0.00 43.17 6.13
1582 1807 1.376037 CTCCTTGCCACGGGAAGAC 60.376 63.158 18.00 0.00 44.67 3.01
1586 1811 2.709125 CTTGCCACGGGAAGACGACA 62.709 60.000 11.63 0.00 44.67 4.35
1612 1837 2.583593 GGCTGGCTCGACATCGTC 60.584 66.667 0.54 0.00 40.80 4.20
1769 1994 5.665812 ACCAGTCTCCTAATTACAAGCCATA 59.334 40.000 0.00 0.00 0.00 2.74
1770 1995 6.330250 ACCAGTCTCCTAATTACAAGCCATAT 59.670 38.462 0.00 0.00 0.00 1.78
1771 1996 7.512746 ACCAGTCTCCTAATTACAAGCCATATA 59.487 37.037 0.00 0.00 0.00 0.86
1772 1997 8.543774 CCAGTCTCCTAATTACAAGCCATATAT 58.456 37.037 0.00 0.00 0.00 0.86
1798 2023 0.310854 TGATCGACACCGGATCATCG 59.689 55.000 9.46 11.75 36.24 3.84
1799 2024 0.311165 GATCGACACCGGATCATCGT 59.689 55.000 9.46 2.67 36.03 3.73
1853 2086 2.653726 TGTCATGTTTGCAGTGAGGTT 58.346 42.857 0.00 0.00 0.00 3.50
1868 2101 2.289819 TGAGGTTATCAACGGGTTGGTC 60.290 50.000 11.31 0.00 40.78 4.02
1995 2228 9.206848 CATCATTTGATTCCATGGGACAGGTTT 62.207 40.741 13.02 0.00 34.95 3.27
2036 2269 8.792633 TGATTTTTCTTCAAATACTGAATCCGT 58.207 29.630 0.00 0.00 43.20 4.69
2072 2317 7.783090 TGTCAGAGATGATTTATGCTCTTTC 57.217 36.000 0.00 0.00 35.66 2.62
2095 2340 3.541632 TGAAACACAACTTGAGAGGGTC 58.458 45.455 0.00 0.00 0.00 4.46
2101 2346 4.399303 ACACAACTTGAGAGGGTCTTTTTG 59.601 41.667 0.00 0.00 0.00 2.44
2103 2348 5.588648 CACAACTTGAGAGGGTCTTTTTGTA 59.411 40.000 0.00 0.00 0.00 2.41
2105 2350 6.486993 ACAACTTGAGAGGGTCTTTTTGTATC 59.513 38.462 0.00 0.00 0.00 2.24
2230 2477 2.564947 ACAGGAGCTTCTACTGAACCAG 59.435 50.000 12.64 0.00 44.74 4.00
2260 2507 2.432146 TCTGGTGCTCGATATGAAGCTT 59.568 45.455 0.00 0.00 0.00 3.74
2287 2534 4.759564 CAGAGAATTGCACGCTGC 57.240 55.556 0.00 3.44 45.29 5.25
2350 2597 1.357258 CGAAGCTGAAGCAGTGCGAT 61.357 55.000 10.00 2.32 45.16 4.58
2362 2609 2.420022 GCAGTGCGATTACTTCCACATT 59.580 45.455 0.00 0.00 31.61 2.71
2373 2620 4.918810 ACTTCCACATTGAAAAGGTCAC 57.081 40.909 0.00 0.00 39.78 3.67
2386 2633 1.794714 AGGTCACGGAGGAGCATAAT 58.205 50.000 6.09 0.00 37.74 1.28
2469 2737 2.991190 CGTTGGGATGCACGGTATATAC 59.009 50.000 4.14 4.14 32.58 1.47
2471 2739 3.953712 TGGGATGCACGGTATATACAG 57.046 47.619 14.70 12.80 0.00 2.74
2476 2744 5.109903 GGATGCACGGTATATACAGGATTC 58.890 45.833 16.02 7.00 0.00 2.52
2477 2745 5.337250 GGATGCACGGTATATACAGGATTCA 60.337 44.000 16.02 8.80 0.00 2.57
2491 2759 6.323203 ACAGGATTCATTCAGTGTCAAAAG 57.677 37.500 0.00 0.00 0.00 2.27
2611 2881 6.291377 ACTGAAGAAAGTCAAGCAAGTCATA 58.709 36.000 0.00 0.00 0.00 2.15
2615 2885 5.241662 AGAAAGTCAAGCAAGTCATACTCC 58.758 41.667 0.00 0.00 0.00 3.85
2620 2890 3.070878 TCAAGCAAGTCATACTCCACACA 59.929 43.478 0.00 0.00 0.00 3.72
2629 2899 1.961793 TACTCCACACAGTGTTTGCC 58.038 50.000 2.45 0.00 0.00 4.52
2684 2954 6.874278 TTGAAGATCAGAGGGTATTCTTGA 57.126 37.500 0.00 0.00 0.00 3.02
2685 2955 6.227298 TGAAGATCAGAGGGTATTCTTGAC 57.773 41.667 0.00 0.00 0.00 3.18
2686 2956 5.960811 TGAAGATCAGAGGGTATTCTTGACT 59.039 40.000 0.00 0.00 0.00 3.41
2687 2957 5.867903 AGATCAGAGGGTATTCTTGACTG 57.132 43.478 0.00 0.00 0.00 3.51
2688 2958 5.523588 AGATCAGAGGGTATTCTTGACTGA 58.476 41.667 0.00 0.00 37.33 3.41
2689 2959 6.142498 AGATCAGAGGGTATTCTTGACTGAT 58.858 40.000 0.00 0.00 43.25 2.90
2690 2960 7.301420 AGATCAGAGGGTATTCTTGACTGATA 58.699 38.462 0.00 0.00 41.53 2.15
2691 2961 6.716934 TCAGAGGGTATTCTTGACTGATAC 57.283 41.667 0.00 0.00 0.00 2.24
2692 2962 6.194967 TCAGAGGGTATTCTTGACTGATACA 58.805 40.000 0.00 0.00 0.00 2.29
2719 2989 4.083271 GCTCCAAACTCTGTTGGTATGAAC 60.083 45.833 4.00 0.00 46.93 3.18
2747 3017 3.314635 GCCATCATTTCCTGTCAGTCATC 59.685 47.826 0.00 0.00 0.00 2.92
2757 3027 3.450096 CCTGTCAGTCATCCAGAGAATGA 59.550 47.826 0.00 0.00 37.71 2.57
2764 3034 3.808726 GTCATCCAGAGAATGATGTCAGC 59.191 47.826 0.00 0.00 39.47 4.26
2766 3036 3.538634 TCCAGAGAATGATGTCAGCTG 57.461 47.619 7.63 7.63 0.00 4.24
2772 3042 5.640783 CAGAGAATGATGTCAGCTGTAACAA 59.359 40.000 14.67 0.00 0.00 2.83
2777 3047 5.611796 TGATGTCAGCTGTAACAAATCAC 57.388 39.130 14.67 1.28 0.00 3.06
2784 3054 2.159653 GCTGTAACAAATCACTGGAGCG 60.160 50.000 0.00 0.00 0.00 5.03
2785 3055 3.067106 CTGTAACAAATCACTGGAGCGT 58.933 45.455 0.00 0.00 0.00 5.07
2787 3057 4.242475 TGTAACAAATCACTGGAGCGTAG 58.758 43.478 0.00 0.00 0.00 3.51
2801 3071 2.095461 AGCGTAGTTCTGATGCAGAGA 58.905 47.619 0.00 0.00 41.75 3.10
2865 3135 2.895680 GGATGGCTGCTCGAGTGA 59.104 61.111 15.13 0.00 0.00 3.41
2886 3156 1.745141 GCTCATGGAGGGTGCAAGTAG 60.745 57.143 0.00 0.00 0.00 2.57
2947 3217 0.750546 TAGTGTCATCGGTCTCGGGG 60.751 60.000 0.00 0.00 36.95 5.73
3056 3326 2.485814 GGAACACCTGAGCTCAATCAAC 59.514 50.000 18.85 7.75 0.00 3.18
3090 3360 1.084289 GGTCTTCATGCCGTGGTAAC 58.916 55.000 0.00 0.00 0.00 2.50
3160 3433 7.587037 AGATTTCCAGAAACAAACAGATCAA 57.413 32.000 0.00 0.00 32.51 2.57
3206 3506 4.927425 CAGTTGCATTTGAAAATGAGGAGG 59.073 41.667 17.78 2.50 46.72 4.30
3224 3524 0.400594 GGAACACAGCACCCCTTACT 59.599 55.000 0.00 0.00 0.00 2.24
3246 3546 6.177610 ACTGTGAAGAGAAAACCTTACACAA 58.822 36.000 0.00 0.00 34.54 3.33
3575 3875 6.595716 CAGTAGGGATCCTTTCTTACTGTTTG 59.404 42.308 12.58 0.00 37.52 2.93
3578 3878 4.396478 GGGATCCTTTCTTACTGTTTGCTC 59.604 45.833 12.58 0.00 0.00 4.26
3579 3879 5.003804 GGATCCTTTCTTACTGTTTGCTCA 58.996 41.667 3.84 0.00 0.00 4.26
3621 3921 6.757897 TTGTTTTACATTATGCTCTCTGGG 57.242 37.500 0.00 0.00 0.00 4.45
3622 3922 4.640201 TGTTTTACATTATGCTCTCTGGGC 59.360 41.667 0.00 0.00 0.00 5.36
3623 3923 4.778213 TTTACATTATGCTCTCTGGGCT 57.222 40.909 0.00 0.00 0.00 5.19
3624 3924 5.887214 TTTACATTATGCTCTCTGGGCTA 57.113 39.130 0.00 0.00 0.00 3.93
3625 3925 6.439636 TTTACATTATGCTCTCTGGGCTAT 57.560 37.500 0.00 0.00 0.00 2.97
3626 3926 4.550076 ACATTATGCTCTCTGGGCTATC 57.450 45.455 0.00 0.00 0.00 2.08
3627 3927 3.262915 ACATTATGCTCTCTGGGCTATCC 59.737 47.826 0.00 0.00 0.00 2.59
3682 3982 9.584008 AACTGCTCATGATTCCTGAATATTTAT 57.416 29.630 0.00 0.00 0.00 1.40
3712 4012 4.999950 CAGAACCTAAGCTGTTTCTCATGT 59.000 41.667 0.00 0.00 0.00 3.21
3739 4039 2.045524 CCTCCAGAGGCTCACATGTAT 58.954 52.381 18.26 0.00 42.44 2.29
3754 4054 3.262405 ACATGTATTCTTACACCCACCGT 59.738 43.478 0.00 0.00 41.02 4.83
3757 4057 2.467566 ATTCTTACACCCACCGTGAC 57.532 50.000 0.00 0.00 46.20 3.67
3769 4069 3.340727 CCGTGACGGTAATCTGACC 57.659 57.895 17.28 0.00 42.73 4.02
3907 4207 1.576356 GAAGAGTGATGATGTCGGCC 58.424 55.000 0.00 0.00 0.00 6.13
4000 4300 3.076079 TCAGTATGTGGACACTCGGTA 57.924 47.619 3.91 0.00 37.40 4.02
4043 4344 1.519898 GGGTATACACACGCACCCG 60.520 63.158 5.01 0.00 41.24 5.28
4242 4560 2.832661 AACGCCTGCAAGCCACAA 60.833 55.556 0.71 0.00 0.00 3.33
4252 4570 0.389025 CAAGCCACAACAAACCCTCC 59.611 55.000 0.00 0.00 0.00 4.30
4369 4688 7.210873 GTCACCTTATATACCAACCTTCTGAG 58.789 42.308 0.00 0.00 0.00 3.35
4396 4715 2.094182 TCTAATGCCTCTGTCGTGTTCC 60.094 50.000 0.00 0.00 0.00 3.62
4568 4887 1.804748 GAAGGCCGAGTTTGTGGTAAG 59.195 52.381 0.00 0.00 0.00 2.34
4584 4903 2.099405 GTAAGCTGCATGCCCCTTTTA 58.901 47.619 20.54 8.57 44.23 1.52
4585 4904 1.870064 AAGCTGCATGCCCCTTTTAT 58.130 45.000 16.68 0.00 44.23 1.40
4595 4914 5.937540 GCATGCCCCTTTTATTGTTACTTTT 59.062 36.000 6.36 0.00 0.00 2.27
4692 5011 3.446516 GCAGGATTTTCTCATGAAGGCTT 59.553 43.478 0.00 0.00 37.89 4.35
4707 5026 1.037030 GGCTTTTGATCGGCATGGGA 61.037 55.000 0.00 0.00 0.00 4.37
4778 5097 2.613223 GGACCTTCTGCTTGGACAGTAC 60.613 54.545 0.00 0.00 38.84 2.73
4885 5204 7.556844 ACTATTGAACTTACTCATGACCGAAT 58.443 34.615 0.00 0.00 0.00 3.34
5007 5326 3.120060 GGTGAACAGACATTCATCAGCAC 60.120 47.826 0.00 0.00 40.60 4.40
5036 5355 1.353694 GAAGCCCATCAGGATAGGCAT 59.646 52.381 18.65 8.60 46.10 4.40
5039 5358 2.307098 AGCCCATCAGGATAGGCATTAC 59.693 50.000 18.65 0.00 46.10 1.89
5050 5369 4.574828 GGATAGGCATTACGAAAAGCAAGA 59.425 41.667 0.00 0.00 30.90 3.02
5056 5375 4.518217 CATTACGAAAAGCAAGATAGCGG 58.482 43.478 0.00 0.00 40.15 5.52
5057 5376 2.380084 ACGAAAAGCAAGATAGCGGA 57.620 45.000 0.00 0.00 40.15 5.54
5058 5377 2.695359 ACGAAAAGCAAGATAGCGGAA 58.305 42.857 0.00 0.00 40.15 4.30
5059 5378 3.071479 ACGAAAAGCAAGATAGCGGAAA 58.929 40.909 0.00 0.00 40.15 3.13
5060 5379 3.125316 ACGAAAAGCAAGATAGCGGAAAG 59.875 43.478 0.00 0.00 40.15 2.62
5061 5380 3.370978 CGAAAAGCAAGATAGCGGAAAGA 59.629 43.478 0.00 0.00 40.15 2.52
5062 5381 4.034510 CGAAAAGCAAGATAGCGGAAAGAT 59.965 41.667 0.00 0.00 40.15 2.40
5063 5382 4.889832 AAAGCAAGATAGCGGAAAGATG 57.110 40.909 0.00 0.00 40.15 2.90
5064 5383 3.550437 AGCAAGATAGCGGAAAGATGT 57.450 42.857 0.00 0.00 40.15 3.06
5069 5388 3.034635 AGATAGCGGAAAGATGTCACCT 58.965 45.455 0.00 0.00 0.00 4.00
5073 5392 1.359848 CGGAAAGATGTCACCTTCCG 58.640 55.000 14.14 14.14 32.53 4.30
5086 5405 3.384789 TCACCTTCCGGAACATCAGATAG 59.615 47.826 14.35 0.00 0.00 2.08
5130 5449 7.446013 AGAGAAATGGTCCAATTTTACAACGTA 59.554 33.333 0.00 0.00 29.89 3.57
5135 5454 5.107026 TGGTCCAATTTTACAACGTACGATG 60.107 40.000 24.41 23.13 0.00 3.84
5171 5499 8.352201 CAAGGTATTCAACAATTCAGAGTTTCA 58.648 33.333 0.00 0.00 0.00 2.69
5191 5519 1.127343 GAATGGGAGGACAGGGAGAG 58.873 60.000 0.00 0.00 0.00 3.20
5207 5535 0.031616 AGAGATGGGTCTGGAGTCCC 60.032 60.000 6.74 2.24 42.66 4.46
5235 5563 5.248477 AGTGAGTTAAGATTGGCTTACAGGA 59.752 40.000 0.00 0.00 38.76 3.86
5261 5589 3.915575 CAGGCTGGATGCTTGGAC 58.084 61.111 6.61 0.00 43.90 4.02
5298 5626 1.070758 ACCGCTATTCGCCATCTCATT 59.929 47.619 0.00 0.00 36.73 2.57
5300 5628 3.244078 ACCGCTATTCGCCATCTCATTTA 60.244 43.478 0.00 0.00 36.73 1.40
5447 5775 2.753043 GAGGACCGTCGCCACCTA 60.753 66.667 0.00 0.00 32.53 3.08
5484 5812 1.135915 AGAGTCATGCATCGGACACTC 59.864 52.381 16.86 13.00 36.50 3.51
5503 5831 4.687948 CACTCCTAGCATGTTATCCGAATG 59.312 45.833 0.00 0.00 0.00 2.67
5745 6073 1.016627 GCTTGCATATGTCGCTTCCA 58.983 50.000 4.29 0.00 0.00 3.53
5846 6174 3.673338 TCGTCAAGCAAATACAGAAGACG 59.327 43.478 0.00 0.00 46.18 4.18
5885 6213 7.125391 TCATAGAATTTGCCCCTGATTACTTT 58.875 34.615 0.00 0.00 0.00 2.66
6003 6348 9.643693 GCATAATTTCCATTTTTCTTCTTCTGA 57.356 29.630 0.00 0.00 0.00 3.27
6114 6459 5.261040 TGGAAAATCTCCTCTTTGGACAT 57.739 39.130 0.00 0.00 45.64 3.06
6120 6465 9.396022 GAAAATCTCCTCTTTGGACATAATGTA 57.604 33.333 0.00 0.00 40.56 2.29
6255 6600 3.594603 ATCTATATTGGCGGGAGAACG 57.405 47.619 0.00 0.00 0.00 3.95
6456 6802 2.800544 AGTCGACGAACAAAACCATGAG 59.199 45.455 10.46 0.00 0.00 2.90
6477 6823 3.684788 AGTTTGTACTTGGCATCATCGAC 59.315 43.478 0.00 0.00 0.00 4.20
6621 6967 4.019174 AGTTCATGGCCAAGTATTTCCTG 58.981 43.478 10.96 0.00 0.00 3.86
6648 6994 0.392863 CAGATGATTGGACCACCGCA 60.393 55.000 0.00 0.00 39.42 5.69
6700 7046 0.249531 TCGCGGCAACTGTAACTTGA 60.250 50.000 6.13 0.00 0.00 3.02
6708 7054 5.505654 CGGCAACTGTAACTTGACAAAGATT 60.506 40.000 0.00 0.00 36.84 2.40
6726 7072 0.694771 TTGACAGCCAGAAGCCTCAT 59.305 50.000 0.00 0.00 45.47 2.90
6728 7074 0.251354 GACAGCCAGAAGCCTCATCA 59.749 55.000 0.00 0.00 45.47 3.07
6731 7077 1.134189 CAGCCAGAAGCCTCATCATCA 60.134 52.381 0.00 0.00 45.47 3.07
6733 7079 2.025605 AGCCAGAAGCCTCATCATCAAA 60.026 45.455 0.00 0.00 45.47 2.69
6739 7085 1.833630 AGCCTCATCATCAAACCGAGA 59.166 47.619 0.00 0.00 0.00 4.04
6741 7087 2.677902 GCCTCATCATCAAACCGAGACA 60.678 50.000 0.00 0.00 0.00 3.41
6747 7093 2.028203 TCATCAAACCGAGACATGCTCA 60.028 45.455 14.69 0.00 44.15 4.26
6750 7096 3.411446 TCAAACCGAGACATGCTCAATT 58.589 40.909 14.69 7.23 44.15 2.32
6757 7103 3.869832 CGAGACATGCTCAATTCAGTGAT 59.130 43.478 14.69 0.00 44.15 3.06
6772 7118 2.268920 GATGAACTGCCCTCGCCA 59.731 61.111 0.00 0.00 0.00 5.69
6793 7140 4.518211 CCATTATGAGTTCATCTTCCAGCC 59.482 45.833 0.00 0.00 37.76 4.85
6829 7177 3.251479 TGCAAGCAGTGTACATAGGAG 57.749 47.619 0.00 0.00 0.00 3.69
6840 7188 5.103387 AGTGTACATAGGAGGGGTGTATGTA 60.103 44.000 0.00 0.00 38.19 2.29
7016 7366 8.856153 TCTTTACATTCCTGCATAACTAAACA 57.144 30.769 0.00 0.00 0.00 2.83
7018 7368 9.507280 CTTTACATTCCTGCATAACTAAACATG 57.493 33.333 0.00 0.00 0.00 3.21
7046 7396 6.415573 AGTGGCTTAACCTTTATGTTCCTAG 58.584 40.000 0.00 0.00 40.22 3.02
7047 7397 6.012771 AGTGGCTTAACCTTTATGTTCCTAGT 60.013 38.462 0.00 0.00 40.22 2.57
7075 7427 7.465353 TTTTTCCAATCAGAGACAATATGCA 57.535 32.000 0.00 0.00 0.00 3.96
7077 7429 6.441093 TTCCAATCAGAGACAATATGCAAC 57.559 37.500 0.00 0.00 0.00 4.17
7078 7430 5.499313 TCCAATCAGAGACAATATGCAACA 58.501 37.500 0.00 0.00 0.00 3.33
7079 7431 5.587443 TCCAATCAGAGACAATATGCAACAG 59.413 40.000 0.00 0.00 0.00 3.16
7080 7432 5.587443 CCAATCAGAGACAATATGCAACAGA 59.413 40.000 0.00 0.00 0.00 3.41
7081 7433 6.094464 CCAATCAGAGACAATATGCAACAGAA 59.906 38.462 0.00 0.00 0.00 3.02
7082 7434 7.362315 CCAATCAGAGACAATATGCAACAGAAA 60.362 37.037 0.00 0.00 0.00 2.52
7083 7435 6.732531 TCAGAGACAATATGCAACAGAAAG 57.267 37.500 0.00 0.00 0.00 2.62
7084 7436 6.466812 TCAGAGACAATATGCAACAGAAAGA 58.533 36.000 0.00 0.00 0.00 2.52
7085 7437 6.369890 TCAGAGACAATATGCAACAGAAAGAC 59.630 38.462 0.00 0.00 0.00 3.01
7086 7438 6.148315 CAGAGACAATATGCAACAGAAAGACA 59.852 38.462 0.00 0.00 0.00 3.41
7087 7439 6.712095 AGAGACAATATGCAACAGAAAGACAA 59.288 34.615 0.00 0.00 0.00 3.18
7088 7440 7.392673 AGAGACAATATGCAACAGAAAGACAAT 59.607 33.333 0.00 0.00 0.00 2.71
7089 7441 7.310664 AGACAATATGCAACAGAAAGACAATG 58.689 34.615 0.00 0.00 0.00 2.82
7090 7442 6.985117 ACAATATGCAACAGAAAGACAATGT 58.015 32.000 0.00 0.00 0.00 2.71
7091 7443 6.864685 ACAATATGCAACAGAAAGACAATGTG 59.135 34.615 0.00 0.00 0.00 3.21
7092 7444 3.082698 TGCAACAGAAAGACAATGTGC 57.917 42.857 0.00 0.00 0.00 4.57
7093 7445 2.426381 TGCAACAGAAAGACAATGTGCA 59.574 40.909 0.00 0.00 32.51 4.57
7094 7446 3.119209 TGCAACAGAAAGACAATGTGCAA 60.119 39.130 0.00 0.00 32.23 4.08
7095 7447 3.243643 GCAACAGAAAGACAATGTGCAAC 59.756 43.478 0.00 0.00 37.35 4.17
7112 7464 3.982701 TGCAACAGAATTTCGATGCAAAG 59.017 39.130 18.13 0.00 40.47 2.77
7114 7466 4.860907 GCAACAGAATTTCGATGCAAAGAT 59.139 37.500 14.86 0.00 34.10 2.40
7131 7483 6.073602 TGCAAAGATGACTCGTATCATAATGC 60.074 38.462 18.09 18.09 39.48 3.56
7135 7487 6.705302 AGATGACTCGTATCATAATGCCATT 58.295 36.000 0.00 0.00 39.48 3.16
7139 7491 8.846943 TGACTCGTATCATAATGCCATTAATT 57.153 30.769 0.47 0.00 0.00 1.40
7155 7507 6.818142 GCCATTAATTTTCATACCAGCAGTTT 59.182 34.615 0.00 0.00 0.00 2.66
7284 7642 4.879598 ACTAGTAACTGAACAAACCCTCG 58.120 43.478 0.00 0.00 0.00 4.63
7294 7652 2.200337 AAACCCTCGCAGTTTGCCC 61.200 57.895 0.00 0.00 41.12 5.36
7307 7665 3.749088 CAGTTTGCCCGAGTACAACATAA 59.251 43.478 0.00 0.00 0.00 1.90
7310 7668 3.620427 TGCCCGAGTACAACATAATGT 57.380 42.857 0.00 0.00 37.32 2.71
7321 7679 8.615878 AGTACAACATAATGTAGCTTCACAAA 57.384 30.769 0.00 0.00 36.51 2.83
7434 7792 4.692625 CGGCTCTTGAATATGGGAGTATTG 59.307 45.833 0.00 0.00 0.00 1.90
7522 7880 1.915983 GTTCCTTGGCTCCCTAGGG 59.084 63.158 23.22 23.22 44.61 3.53
7524 7882 3.493303 CCTTGGCTCCCTAGGGGC 61.493 72.222 28.19 26.55 43.94 5.80
7614 7972 1.525197 GCGCATCCAATTGCATTCATG 59.475 47.619 0.30 0.00 42.91 3.07
7623 7981 2.852714 TTGCATTCATGGGGGAGATT 57.147 45.000 0.00 0.00 0.00 2.40
7640 7998 2.576191 AGATTGGGTTCCGGAAGATCAA 59.424 45.455 19.50 20.74 0.00 2.57
7644 8002 1.450025 GGTTCCGGAAGATCAACCAC 58.550 55.000 19.50 2.37 38.57 4.16
7653 8011 2.457366 AGATCAACCACGAGACCAAC 57.543 50.000 0.00 0.00 0.00 3.77
7656 8014 0.528901 TCAACCACGAGACCAACACG 60.529 55.000 0.00 0.00 38.45 4.49
7659 8017 3.403057 CACGAGACCAACACGGCG 61.403 66.667 4.80 4.80 39.03 6.46
7688 8047 4.389374 ACCTACAGTGGAATGTTCAGTTG 58.611 43.478 0.00 0.00 34.56 3.16
7690 8049 4.214119 CCTACAGTGGAATGTTCAGTTGTG 59.786 45.833 0.00 0.00 34.56 3.33
7705 8064 3.812053 CAGTTGTGGAAACAGAGGAGAAG 59.188 47.826 0.00 0.00 44.46 2.85
7710 8069 2.439507 TGGAAACAGAGGAGAAGCTTGT 59.560 45.455 2.10 0.00 35.01 3.16
7716 8075 2.057922 AGAGGAGAAGCTTGTGGGAAA 58.942 47.619 2.10 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.978044 CCTCTCTTTCTTGAAATGATTTTCTTT 57.022 29.630 0.00 0.00 41.54 2.52
13 14 8.087136 GCCTCTCTTTCTTGAAATGATTTTCTT 58.913 33.333 0.00 0.00 41.54 2.52
14 15 7.232127 TGCCTCTCTTTCTTGAAATGATTTTCT 59.768 33.333 0.00 0.00 41.54 2.52
15 16 7.328005 GTGCCTCTCTTTCTTGAAATGATTTTC 59.672 37.037 0.00 0.00 41.39 2.29
16 17 7.150640 GTGCCTCTCTTTCTTGAAATGATTTT 58.849 34.615 0.00 0.00 0.00 1.82
17 18 6.266103 TGTGCCTCTCTTTCTTGAAATGATTT 59.734 34.615 0.00 0.00 0.00 2.17
34 35 4.156455 TCTTTCTTTCTTGTGTGCCTCT 57.844 40.909 0.00 0.00 0.00 3.69
86 97 6.369059 ACTCAAACCATTGATTGATCGATC 57.631 37.500 18.72 18.72 44.29 3.69
90 101 5.801947 CGGAAACTCAAACCATTGATTGATC 59.198 40.000 5.63 0.00 44.29 2.92
94 105 3.306019 GCCGGAAACTCAAACCATTGATT 60.306 43.478 5.05 0.00 44.29 2.57
95 106 2.231235 GCCGGAAACTCAAACCATTGAT 59.769 45.455 5.05 0.00 44.29 2.57
98 109 0.596082 CGCCGGAAACTCAAACCATT 59.404 50.000 5.05 0.00 0.00 3.16
100 111 2.548295 GCGCCGGAAACTCAAACCA 61.548 57.895 5.05 0.00 0.00 3.67
101 112 2.254350 GCGCCGGAAACTCAAACC 59.746 61.111 5.05 0.00 0.00 3.27
120 131 1.566231 AGATGAGGATTTGACCACCCC 59.434 52.381 0.00 0.00 0.00 4.95
186 197 1.343142 GACAATCACCCAACCCAAACC 59.657 52.381 0.00 0.00 0.00 3.27
187 198 2.035632 TGACAATCACCCAACCCAAAC 58.964 47.619 0.00 0.00 0.00 2.93
188 199 2.315176 CTGACAATCACCCAACCCAAA 58.685 47.619 0.00 0.00 0.00 3.28
189 200 1.993956 CTGACAATCACCCAACCCAA 58.006 50.000 0.00 0.00 0.00 4.12
190 201 0.539438 GCTGACAATCACCCAACCCA 60.539 55.000 0.00 0.00 0.00 4.51
191 202 0.251341 AGCTGACAATCACCCAACCC 60.251 55.000 0.00 0.00 0.00 4.11
211 222 2.053277 GTCTCGTCACCTCCCCCTC 61.053 68.421 0.00 0.00 0.00 4.30
214 225 2.971452 GTGTCTCGTCACCTCCCC 59.029 66.667 0.00 0.00 32.81 4.81
221 232 1.232621 ATCGTGTCGGTGTCTCGTCA 61.233 55.000 0.00 0.00 0.00 4.35
222 233 0.520827 GATCGTGTCGGTGTCTCGTC 60.521 60.000 0.00 0.00 0.00 4.20
223 234 1.500844 GATCGTGTCGGTGTCTCGT 59.499 57.895 0.00 0.00 0.00 4.18
224 235 1.580385 CGATCGTGTCGGTGTCTCG 60.580 63.158 7.03 0.00 46.47 4.04
236 257 1.505477 GCCGGTAGCTACTCGATCGT 61.505 60.000 26.32 0.00 38.99 3.73
237 258 1.207085 GCCGGTAGCTACTCGATCG 59.793 63.158 26.32 19.35 38.99 3.69
238 259 1.170919 TGGCCGGTAGCTACTCGATC 61.171 60.000 26.32 19.59 43.05 3.69
240 261 1.822613 CTGGCCGGTAGCTACTCGA 60.823 63.158 26.32 13.14 43.05 4.04
241 262 2.722487 CTGGCCGGTAGCTACTCG 59.278 66.667 22.74 21.71 43.05 4.18
245 268 2.838225 GAGGCTGGCCGGTAGCTA 60.838 66.667 25.16 0.00 43.05 3.32
259 282 2.103934 CAAGAGAGCGAGCGGAGG 59.896 66.667 0.00 0.00 0.00 4.30
263 286 1.150567 CCAATCCAAGAGAGCGAGCG 61.151 60.000 0.00 0.00 0.00 5.03
264 287 0.176680 TCCAATCCAAGAGAGCGAGC 59.823 55.000 0.00 0.00 0.00 5.03
265 288 1.800655 CGTCCAATCCAAGAGAGCGAG 60.801 57.143 0.00 0.00 0.00 5.03
266 289 0.173481 CGTCCAATCCAAGAGAGCGA 59.827 55.000 0.00 0.00 0.00 4.93
267 290 0.807667 CCGTCCAATCCAAGAGAGCG 60.808 60.000 0.00 0.00 0.00 5.03
268 291 0.462759 CCCGTCCAATCCAAGAGAGC 60.463 60.000 0.00 0.00 0.00 4.09
269 292 0.905357 ACCCGTCCAATCCAAGAGAG 59.095 55.000 0.00 0.00 0.00 3.20
270 293 1.358152 AACCCGTCCAATCCAAGAGA 58.642 50.000 0.00 0.00 0.00 3.10
271 294 3.560636 ATAACCCGTCCAATCCAAGAG 57.439 47.619 0.00 0.00 0.00 2.85
273 296 2.612212 CGAATAACCCGTCCAATCCAAG 59.388 50.000 0.00 0.00 0.00 3.61
274 297 2.027007 ACGAATAACCCGTCCAATCCAA 60.027 45.455 0.00 0.00 34.97 3.53
287 310 5.512434 GGAGAAGAAGAAGACGACGAATAAC 59.488 44.000 0.00 0.00 0.00 1.89
290 313 3.759618 AGGAGAAGAAGAAGACGACGAAT 59.240 43.478 0.00 0.00 0.00 3.34
300 323 5.723887 AGAAATAGGAGCAGGAGAAGAAGAA 59.276 40.000 0.00 0.00 0.00 2.52
312 335 2.171448 GAGCAGGGAAGAAATAGGAGCA 59.829 50.000 0.00 0.00 0.00 4.26
313 336 2.437651 AGAGCAGGGAAGAAATAGGAGC 59.562 50.000 0.00 0.00 0.00 4.70
360 397 2.721167 CGGAGATGGAACCGGCAGA 61.721 63.158 0.00 0.00 44.59 4.26
395 457 0.872021 GTCTGCTAGGATTGTCGCCG 60.872 60.000 0.00 0.00 0.00 6.46
397 459 0.175760 TGGTCTGCTAGGATTGTCGC 59.824 55.000 0.00 0.00 0.00 5.19
398 460 1.751351 TCTGGTCTGCTAGGATTGTCG 59.249 52.381 0.00 0.00 0.00 4.35
399 461 3.640967 AGATCTGGTCTGCTAGGATTGTC 59.359 47.826 0.00 0.00 35.31 3.18
400 462 3.652055 AGATCTGGTCTGCTAGGATTGT 58.348 45.455 0.00 0.00 35.31 2.71
411 473 1.649321 TGGAGCAACAGATCTGGTCT 58.351 50.000 26.08 17.98 40.40 3.85
413 475 1.134580 CGATGGAGCAACAGATCTGGT 60.135 52.381 26.08 18.36 34.19 4.00
415 477 1.579698 CCGATGGAGCAACAGATCTG 58.420 55.000 21.37 21.37 0.00 2.90
417 479 0.179062 AGCCGATGGAGCAACAGATC 60.179 55.000 0.00 0.00 0.00 2.75
419 481 1.078918 CAGCCGATGGAGCAACAGA 60.079 57.895 0.00 0.00 0.00 3.41
429 491 1.136147 GAACAAGCAGCAGCCGATG 59.864 57.895 0.00 0.00 43.56 3.84
444 506 2.434359 CGGAGCCGGAGTTGGAAC 60.434 66.667 5.05 0.00 35.56 3.62
477 539 1.488261 GAAATGGGATCGTCGTCGCC 61.488 60.000 0.00 0.00 36.96 5.54
478 540 1.808234 CGAAATGGGATCGTCGTCGC 61.808 60.000 0.00 0.00 35.64 5.19
479 541 2.204491 CGAAATGGGATCGTCGTCG 58.796 57.895 0.00 0.00 35.64 5.12
485 547 3.413558 GAAACGAAACGAAATGGGATCG 58.586 45.455 0.00 0.00 45.47 3.69
486 548 3.427098 GGGAAACGAAACGAAATGGGATC 60.427 47.826 0.00 0.00 0.00 3.36
487 549 2.490509 GGGAAACGAAACGAAATGGGAT 59.509 45.455 0.00 0.00 0.00 3.85
488 550 1.881324 GGGAAACGAAACGAAATGGGA 59.119 47.619 0.00 0.00 0.00 4.37
496 558 1.301423 TCACAAGGGGAAACGAAACG 58.699 50.000 0.00 0.00 0.00 3.60
502 564 4.377021 GACCAAAAATCACAAGGGGAAAC 58.623 43.478 0.00 0.00 0.00 2.78
503 565 3.389656 GGACCAAAAATCACAAGGGGAAA 59.610 43.478 0.00 0.00 0.00 3.13
529 591 2.467946 CTTTGCAGCTTGGTCGCCTG 62.468 60.000 0.00 0.00 0.00 4.85
547 643 2.166664 GCGGAGATGAACTTACTCACCT 59.833 50.000 0.00 0.00 33.00 4.00
549 645 2.186076 CGCGGAGATGAACTTACTCAC 58.814 52.381 0.00 0.00 33.00 3.51
561 657 4.087892 AAGTGCTGGCGCGGAGAT 62.088 61.111 8.83 0.00 39.65 2.75
566 662 3.386867 GAATGGAAGTGCTGGCGCG 62.387 63.158 0.00 0.00 39.65 6.86
567 663 1.589716 AAGAATGGAAGTGCTGGCGC 61.590 55.000 0.00 0.00 0.00 6.53
568 664 0.883833 AAAGAATGGAAGTGCTGGCG 59.116 50.000 0.00 0.00 0.00 5.69
571 667 5.702349 AAGAAGAAAGAATGGAAGTGCTG 57.298 39.130 0.00 0.00 0.00 4.41
572 668 6.772716 TGTAAAGAAGAAAGAATGGAAGTGCT 59.227 34.615 0.00 0.00 0.00 4.40
573 669 6.970484 TGTAAAGAAGAAAGAATGGAAGTGC 58.030 36.000 0.00 0.00 0.00 4.40
574 670 9.617975 GATTGTAAAGAAGAAAGAATGGAAGTG 57.382 33.333 0.00 0.00 0.00 3.16
575 671 9.579932 AGATTGTAAAGAAGAAAGAATGGAAGT 57.420 29.630 0.00 0.00 0.00 3.01
628 738 9.376075 GAGAGATTCAATTGATTCAGTCTACAA 57.624 33.333 24.77 2.48 0.00 2.41
629 739 7.704047 CGAGAGATTCAATTGATTCAGTCTACA 59.296 37.037 24.77 2.95 0.00 2.74
630 740 7.306515 GCGAGAGATTCAATTGATTCAGTCTAC 60.307 40.741 24.77 14.56 0.00 2.59
631 741 6.699204 GCGAGAGATTCAATTGATTCAGTCTA 59.301 38.462 24.77 4.25 0.00 2.59
635 745 5.293814 ACAGCGAGAGATTCAATTGATTCAG 59.706 40.000 24.77 16.27 0.00 3.02
637 747 5.731599 ACAGCGAGAGATTCAATTGATTC 57.268 39.130 18.45 18.45 0.00 2.52
638 748 6.988580 TGATACAGCGAGAGATTCAATTGATT 59.011 34.615 9.40 5.69 0.00 2.57
641 751 6.292757 CCTTGATACAGCGAGAGATTCAATTG 60.293 42.308 0.00 0.00 0.00 2.32
642 752 5.757320 CCTTGATACAGCGAGAGATTCAATT 59.243 40.000 0.00 0.00 0.00 2.32
650 801 5.582269 TCATTTTTCCTTGATACAGCGAGAG 59.418 40.000 0.00 0.00 0.00 3.20
652 803 5.801350 TCATTTTTCCTTGATACAGCGAG 57.199 39.130 0.00 0.00 0.00 5.03
658 809 7.999679 TGGATGTCATCATTTTTCCTTGATAC 58.000 34.615 14.72 0.00 34.06 2.24
661 812 7.484993 AATGGATGTCATCATTTTTCCTTGA 57.515 32.000 14.72 0.00 34.44 3.02
662 813 7.279313 GGAAATGGATGTCATCATTTTTCCTTG 59.721 37.037 26.75 0.00 41.80 3.61
664 815 6.670902 AGGAAATGGATGTCATCATTTTTCCT 59.329 34.615 28.78 28.78 43.45 3.36
669 820 4.897670 GGGAGGAAATGGATGTCATCATTT 59.102 41.667 14.72 15.81 43.64 2.32
678 829 6.266330 GGAAATTAAGAGGGAGGAAATGGATG 59.734 42.308 0.00 0.00 0.00 3.51
681 832 5.518865 TGGAAATTAAGAGGGAGGAAATGG 58.481 41.667 0.00 0.00 0.00 3.16
682 833 7.779798 TGTATGGAAATTAAGAGGGAGGAAATG 59.220 37.037 0.00 0.00 0.00 2.32
683 834 7.882755 TGTATGGAAATTAAGAGGGAGGAAAT 58.117 34.615 0.00 0.00 0.00 2.17
702 859 9.436957 AGTAAAAGTTTCAGAGTGTATGTATGG 57.563 33.333 0.00 0.00 0.00 2.74
755 918 4.212847 CGAGGGATTACTGCATCTGAATTG 59.787 45.833 0.00 0.00 0.00 2.32
766 929 1.344763 GATGGGGTCGAGGGATTACTG 59.655 57.143 0.00 0.00 0.00 2.74
778 945 1.838112 TTGATGCAGTTGATGGGGTC 58.162 50.000 0.00 0.00 0.00 4.46
782 949 2.756207 TGGTGATTGATGCAGTTGATGG 59.244 45.455 0.00 0.00 0.00 3.51
796 963 2.763448 GACTAGAGGAGCAGTGGTGATT 59.237 50.000 0.00 0.00 0.00 2.57
809 976 3.607310 CGGATGAACGAATCGACTAGAGG 60.607 52.174 10.55 0.00 35.47 3.69
810 977 3.002451 ACGGATGAACGAATCGACTAGAG 59.998 47.826 10.55 0.00 37.61 2.43
811 978 2.941064 ACGGATGAACGAATCGACTAGA 59.059 45.455 10.55 0.00 37.61 2.43
812 979 3.335786 ACGGATGAACGAATCGACTAG 57.664 47.619 10.55 0.00 37.61 2.57
823 1020 7.131498 AGAGTAGTTATCGATACGGATGAAC 57.869 40.000 4.16 0.56 0.00 3.18
849 1046 9.225682 ACTGGAAGGAAGTGGAAGATATATTAA 57.774 33.333 0.00 0.00 39.30 1.40
864 1061 3.882888 TGCTTGTGTAAACTGGAAGGAAG 59.117 43.478 0.00 0.00 39.30 3.46
865 1062 3.892284 TGCTTGTGTAAACTGGAAGGAA 58.108 40.909 0.00 0.00 39.30 3.36
866 1063 3.569194 TGCTTGTGTAAACTGGAAGGA 57.431 42.857 0.00 0.00 39.30 3.36
867 1064 3.550842 GCTTGCTTGTGTAAACTGGAAGG 60.551 47.826 10.83 0.00 39.30 3.46
943 1162 4.022935 CCTTGTTGTGCATGTATGTCAGTT 60.023 41.667 0.00 0.00 0.00 3.16
951 1170 0.897863 GCCCCCTTGTTGTGCATGTA 60.898 55.000 0.00 0.00 0.00 2.29
953 1172 2.658422 GCCCCCTTGTTGTGCATG 59.342 61.111 0.00 0.00 0.00 4.06
956 1175 2.604382 ATGGCCCCCTTGTTGTGC 60.604 61.111 0.00 0.00 0.00 4.57
957 1176 1.077265 AGATGGCCCCCTTGTTGTG 59.923 57.895 0.00 0.00 0.00 3.33
959 1178 0.682209 CTCAGATGGCCCCCTTGTTG 60.682 60.000 0.00 0.00 0.00 3.33
961 1180 2.988839 GCTCAGATGGCCCCCTTGT 61.989 63.158 0.00 0.00 0.00 3.16
970 1189 9.727627 GAAATTACTGAAATTAAGCTCAGATGG 57.272 33.333 18.69 0.00 41.38 3.51
973 1192 7.414098 GGCGAAATTACTGAAATTAAGCTCAGA 60.414 37.037 18.69 3.16 41.38 3.27
1005 1224 5.163723 GGTGGTGATGATGAGTGTATTGTTG 60.164 44.000 0.00 0.00 0.00 3.33
1014 1233 0.986527 TGCTGGTGGTGATGATGAGT 59.013 50.000 0.00 0.00 0.00 3.41
1040 1259 4.342378 ACACATACCTAGTGATACTGCTGG 59.658 45.833 0.00 0.00 40.16 4.85
1041 1260 5.163509 ACACACATACCTAGTGATACTGCTG 60.164 44.000 0.00 0.00 40.16 4.41
1042 1261 4.956700 ACACACATACCTAGTGATACTGCT 59.043 41.667 0.00 0.00 40.16 4.24
1052 1271 5.221145 GGAGATGACAGACACACATACCTAG 60.221 48.000 0.00 0.00 0.00 3.02
1082 1301 1.627834 GGATGCAGGATTAGGAGGAGG 59.372 57.143 0.00 0.00 0.00 4.30
1083 1302 1.627834 GGGATGCAGGATTAGGAGGAG 59.372 57.143 0.00 0.00 0.00 3.69
1084 1303 1.061424 TGGGATGCAGGATTAGGAGGA 60.061 52.381 0.00 0.00 0.00 3.71
1126 1348 9.561069 GTATATTATCACCTCAGAACCAAACAT 57.439 33.333 0.00 0.00 0.00 2.71
1127 1349 8.544622 TGTATATTATCACCTCAGAACCAAACA 58.455 33.333 0.00 0.00 0.00 2.83
1248 1473 2.434884 AGTCGTCGGCATGCTTGG 60.435 61.111 18.92 7.61 0.00 3.61
1255 1480 3.733960 CCGTCAGAGTCGTCGGCA 61.734 66.667 0.00 0.00 36.68 5.69
1256 1481 3.735029 ACCGTCAGAGTCGTCGGC 61.735 66.667 18.37 0.00 45.76 5.54
1258 1483 2.502080 GCACCGTCAGAGTCGTCG 60.502 66.667 0.00 0.00 0.00 5.12
1290 1515 4.899239 CATCACCCTCCTCGGCGC 62.899 72.222 0.00 0.00 0.00 6.53
1292 1517 4.554036 GGCATCACCCTCCTCGGC 62.554 72.222 0.00 0.00 0.00 5.54
1294 1519 3.432051 GACGGCATCACCCTCCTCG 62.432 68.421 0.00 0.00 33.26 4.63
1328 1553 3.204827 ATCATCGTTGCTGGCCGC 61.205 61.111 11.92 11.92 39.77 6.53
1335 1560 4.614555 TGTTTGGTATCATCATCGTTGC 57.385 40.909 0.00 0.00 0.00 4.17
1362 1587 5.126384 TCATCATCATCATTTGTGTGCACAT 59.874 36.000 24.69 3.32 41.52 3.21
1396 1621 4.438744 CCATCATGCCATTCATCATCATCG 60.439 45.833 0.00 0.00 31.79 3.84
1397 1622 4.462834 ACCATCATGCCATTCATCATCATC 59.537 41.667 0.00 0.00 31.79 2.92
1398 1623 4.416516 ACCATCATGCCATTCATCATCAT 58.583 39.130 0.00 0.00 31.79 2.45
1399 1624 3.839778 ACCATCATGCCATTCATCATCA 58.160 40.909 0.00 0.00 31.79 3.07
1400 1625 5.650703 TGATACCATCATGCCATTCATCATC 59.349 40.000 0.00 0.00 33.59 2.92
1401 1626 5.576128 TGATACCATCATGCCATTCATCAT 58.424 37.500 0.00 0.00 33.59 2.45
1495 1720 1.831286 CATGGCCTTGAGCATCCCC 60.831 63.158 13.33 0.00 46.50 4.81
1518 1743 1.375098 GGTGAGCATCTTGAGCTGCC 61.375 60.000 0.00 0.00 43.58 4.85
1525 1750 1.746615 CCGGGTGGTGAGCATCTTG 60.747 63.158 0.00 0.00 34.92 3.02
1573 1798 4.052229 CCGCTGTCGTCTTCCCGT 62.052 66.667 0.00 0.00 0.00 5.28
1576 1801 4.415332 TCGCCGCTGTCGTCTTCC 62.415 66.667 0.00 0.00 0.00 3.46
1594 1819 4.148825 ACGATGTCGAGCCAGCCC 62.149 66.667 9.67 0.00 43.02 5.19
1595 1820 2.583593 GACGATGTCGAGCCAGCC 60.584 66.667 9.67 0.00 43.02 4.85
1660 1885 0.459899 GGTCCATTTCATTTCCGGCC 59.540 55.000 0.00 0.00 0.00 6.13
1723 1948 4.939509 ATATGTTTGTTACCACTGTCGC 57.060 40.909 0.00 0.00 0.00 5.19
1740 1965 7.819900 GGCTTGTAATTAGGAGACTGGTATATG 59.180 40.741 0.00 0.00 43.88 1.78
1769 1994 3.367395 CCGGTGTCGATCAGCATACATAT 60.367 47.826 14.45 0.00 43.83 1.78
1770 1995 2.030274 CCGGTGTCGATCAGCATACATA 60.030 50.000 14.45 0.00 43.83 2.29
1771 1996 1.269778 CCGGTGTCGATCAGCATACAT 60.270 52.381 14.45 0.00 43.83 2.29
1772 1997 0.102300 CCGGTGTCGATCAGCATACA 59.898 55.000 14.45 0.00 43.83 2.29
1798 2023 0.375106 GAGCACTCTATTGCCGCAAC 59.625 55.000 8.25 0.00 44.14 4.17
1799 2024 0.250234 AGAGCACTCTATTGCCGCAA 59.750 50.000 8.55 8.55 44.14 4.85
1853 2086 2.027561 CCTGAAGACCAACCCGTTGATA 60.028 50.000 9.15 0.00 42.93 2.15
1868 2101 2.935201 GTGAGCTGCATACTTCCTGAAG 59.065 50.000 1.02 5.37 43.79 3.02
1964 2197 4.523173 CCCATGGAATCAAATGATGAGAGG 59.477 45.833 15.22 0.00 42.53 3.69
1967 2200 4.891168 TGTCCCATGGAATCAAATGATGAG 59.109 41.667 15.22 0.00 42.53 2.90
2072 2317 2.880890 CCCTCTCAAGTTGTGTTTCAGG 59.119 50.000 2.11 3.44 0.00 3.86
2101 2346 6.598457 GGTCCTTTTCCTGGTAAAGAAGATAC 59.402 42.308 22.72 13.42 35.16 2.24
2103 2348 5.074515 TGGTCCTTTTCCTGGTAAAGAAGAT 59.925 40.000 22.72 0.00 35.16 2.40
2105 2350 4.725490 TGGTCCTTTTCCTGGTAAAGAAG 58.275 43.478 22.72 10.39 35.16 2.85
2260 2507 1.522668 CAATTCTCTGCAACCGGTCA 58.477 50.000 8.04 0.48 0.00 4.02
2281 2528 0.106469 TAGGAGATCCAGAGCAGCGT 60.106 55.000 0.92 0.00 38.89 5.07
2287 2534 6.126863 ACAGAGACTATAGGAGATCCAGAG 57.873 45.833 4.43 0.00 38.89 3.35
2350 2597 5.008217 CGTGACCTTTTCAATGTGGAAGTAA 59.992 40.000 0.00 0.00 35.39 2.24
2362 2609 0.034896 GCTCCTCCGTGACCTTTTCA 59.965 55.000 0.00 0.00 0.00 2.69
2373 2620 0.469917 ACCACCATTATGCTCCTCCG 59.530 55.000 0.00 0.00 0.00 4.63
2410 2660 5.336744 TCCAAGAACATCAACGTTTTCAAC 58.663 37.500 11.80 0.00 0.00 3.18
2469 2737 6.564709 TCTTTTGACACTGAATGAATCCTG 57.435 37.500 0.00 0.00 0.00 3.86
2584 2854 4.034510 ACTTGCTTGACTTTCTTCAGTTCG 59.965 41.667 0.00 0.00 0.00 3.95
2611 2881 1.095228 CGGCAAACACTGTGTGGAGT 61.095 55.000 15.11 0.00 37.94 3.85
2615 2885 1.767127 TACGCGGCAAACACTGTGTG 61.767 55.000 15.11 4.05 39.87 3.82
2620 2890 2.109387 TGGTACGCGGCAAACACT 59.891 55.556 12.47 0.00 0.00 3.55
2684 2954 5.413833 CAGAGTTTGGAGCATTTGTATCAGT 59.586 40.000 0.00 0.00 0.00 3.41
2685 2955 5.413833 ACAGAGTTTGGAGCATTTGTATCAG 59.586 40.000 0.00 0.00 0.00 2.90
2686 2956 5.316167 ACAGAGTTTGGAGCATTTGTATCA 58.684 37.500 0.00 0.00 0.00 2.15
2687 2957 5.886960 ACAGAGTTTGGAGCATTTGTATC 57.113 39.130 0.00 0.00 0.00 2.24
2688 2958 6.017400 CAACAGAGTTTGGAGCATTTGTAT 57.983 37.500 0.00 0.00 0.00 2.29
2689 2959 5.437289 CAACAGAGTTTGGAGCATTTGTA 57.563 39.130 0.00 0.00 0.00 2.41
2690 2960 4.311816 CAACAGAGTTTGGAGCATTTGT 57.688 40.909 0.00 0.00 0.00 2.83
2719 2989 1.027357 CAGGAAATGATGGCCCTTCG 58.973 55.000 0.00 0.00 0.00 3.79
2747 3017 3.263489 ACAGCTGACATCATTCTCTGG 57.737 47.619 23.35 0.00 0.00 3.86
2757 3027 4.456911 CCAGTGATTTGTTACAGCTGACAT 59.543 41.667 23.35 0.00 0.00 3.06
2764 3034 3.067106 ACGCTCCAGTGATTTGTTACAG 58.933 45.455 0.00 0.00 0.00 2.74
2766 3036 4.243270 ACTACGCTCCAGTGATTTGTTAC 58.757 43.478 0.00 0.00 0.00 2.50
2772 3042 2.826128 TCAGAACTACGCTCCAGTGATT 59.174 45.455 0.00 0.00 0.00 2.57
2777 3047 1.134995 TGCATCAGAACTACGCTCCAG 60.135 52.381 0.00 0.00 0.00 3.86
2784 3054 4.815269 ACTTGTCTCTGCATCAGAACTAC 58.185 43.478 0.00 0.00 40.18 2.73
2785 3055 5.712446 AGTACTTGTCTCTGCATCAGAACTA 59.288 40.000 0.00 0.00 40.18 2.24
2787 3057 4.624882 CAGTACTTGTCTCTGCATCAGAAC 59.375 45.833 0.00 1.47 40.18 3.01
2801 3071 3.407424 TGCAGAATGAGCAGTACTTGT 57.593 42.857 0.00 0.00 39.69 3.16
2865 3135 1.302285 CTTGCACCCTCCATGAGCT 59.698 57.895 0.00 0.00 0.00 4.09
2871 3141 0.690762 GGTTCTACTTGCACCCTCCA 59.309 55.000 0.00 0.00 0.00 3.86
2886 3156 3.119531 TGCATGATTTGAATGGACGGTTC 60.120 43.478 0.00 0.00 0.00 3.62
2891 3161 4.159135 AGGAAGTGCATGATTTGAATGGAC 59.841 41.667 0.00 0.37 44.17 4.02
2932 3202 2.050350 TGACCCCGAGACCGATGAC 61.050 63.158 0.00 0.00 38.22 3.06
2933 3203 2.050350 GTGACCCCGAGACCGATGA 61.050 63.158 0.00 0.00 38.22 2.92
2938 3208 1.304217 TCTCAGTGACCCCGAGACC 60.304 63.158 0.00 0.00 30.94 3.85
2947 3217 4.582701 ATCGATGAATCCTCTCAGTGAC 57.417 45.455 0.00 0.00 0.00 3.67
3056 3326 4.703897 TGAAGACCTTCACTTGGTACTTG 58.296 43.478 8.27 0.00 43.90 3.16
3090 3360 2.680312 ATCAACTGGTCCATCTGTCG 57.320 50.000 0.00 0.00 0.00 4.35
3160 3433 7.094075 ACTGACAATTGCTCATGTATCATTTGT 60.094 33.333 5.05 16.53 37.15 2.83
3206 3506 1.523758 CAGTAAGGGGTGCTGTGTTC 58.476 55.000 0.00 0.00 35.38 3.18
3224 3524 6.826231 TCATTGTGTAAGGTTTTCTCTTCACA 59.174 34.615 0.00 0.00 34.17 3.58
3246 3546 2.333417 ACGTCGTCAGCCTCGTCAT 61.333 57.895 0.00 0.00 30.71 3.06
3373 3673 4.404394 TGCAAATATCGTCCTAAGGAGACA 59.596 41.667 0.00 0.00 33.70 3.41
3604 3904 4.467795 GGATAGCCCAGAGAGCATAATGTA 59.532 45.833 0.00 0.00 34.14 2.29
3620 3920 1.227793 GCAGCTGACAGGGATAGCC 60.228 63.158 20.43 0.00 38.18 3.93
3621 3921 0.813210 GTGCAGCTGACAGGGATAGC 60.813 60.000 20.43 0.00 37.71 2.97
3622 3922 0.538584 TGTGCAGCTGACAGGGATAG 59.461 55.000 20.43 0.00 0.00 2.08
3623 3923 0.983467 TTGTGCAGCTGACAGGGATA 59.017 50.000 20.43 0.99 0.00 2.59
3624 3924 0.111061 TTTGTGCAGCTGACAGGGAT 59.889 50.000 20.43 0.00 0.00 3.85
3625 3925 0.111061 ATTTGTGCAGCTGACAGGGA 59.889 50.000 20.43 9.14 0.00 4.20
3626 3926 0.963962 AATTTGTGCAGCTGACAGGG 59.036 50.000 20.43 0.00 0.00 4.45
3627 3927 2.400399 CAAATTTGTGCAGCTGACAGG 58.600 47.619 20.43 4.31 0.00 4.00
3628 3928 2.223876 ACCAAATTTGTGCAGCTGACAG 60.224 45.455 20.43 8.35 0.00 3.51
3629 3929 1.755959 ACCAAATTTGTGCAGCTGACA 59.244 42.857 20.43 15.84 0.00 3.58
3630 3930 2.514205 ACCAAATTTGTGCAGCTGAC 57.486 45.000 20.43 13.30 0.00 3.51
3631 3931 3.221771 AGTACCAAATTTGTGCAGCTGA 58.778 40.909 20.43 0.00 0.00 4.26
3682 3982 2.229792 CAGCTTAGGTTCTGCCACAAA 58.770 47.619 0.00 0.00 40.61 2.83
3724 4024 5.395768 GGTGTAAGAATACATGTGAGCCTCT 60.396 44.000 9.11 0.08 43.60 3.69
3763 4063 1.865865 GCTTCACAAGAACGGTCAGA 58.134 50.000 1.87 0.00 0.00 3.27
3769 4069 1.112459 GCAAACGCTTCACAAGAACG 58.888 50.000 0.00 0.00 35.70 3.95
3907 4207 0.387202 ATGAGAGATTCCGTGCCTCG 59.613 55.000 0.00 0.00 39.52 4.63
3985 4285 2.289444 CCTGTTTACCGAGTGTCCACAT 60.289 50.000 0.00 0.00 0.00 3.21
4000 4300 3.749981 CGCAAGCAGTCCCTGTTT 58.250 55.556 0.00 0.00 35.40 2.83
4030 4330 1.373246 GCTAACGGGTGCGTGTGTA 60.373 57.895 0.00 0.00 0.00 2.90
4031 4331 2.663852 GCTAACGGGTGCGTGTGT 60.664 61.111 0.00 0.00 0.00 3.72
4033 4333 0.887387 AAATGCTAACGGGTGCGTGT 60.887 50.000 0.00 0.00 0.00 4.49
4036 4336 3.414549 AATAAAATGCTAACGGGTGCG 57.585 42.857 0.00 0.00 0.00 5.34
4139 4457 7.124750 CAGATCCCATACCAAAAGGAAGAAAAT 59.875 37.037 0.00 0.00 30.71 1.82
4156 4474 2.356535 GCCTGAAGTTGACAGATCCCAT 60.357 50.000 0.00 0.00 37.54 4.00
4242 4560 4.569865 GGATTATGGAACTGGAGGGTTTGT 60.570 45.833 0.00 0.00 0.00 2.83
4252 4570 5.097742 TGTGTACTGGGATTATGGAACTG 57.902 43.478 0.00 0.00 0.00 3.16
4369 4688 3.182967 CGACAGAGGCATTAGAGTGAAC 58.817 50.000 0.00 0.00 0.00 3.18
4396 4715 3.008485 ACTCCTCTGGCAAGAACCTAAAG 59.992 47.826 0.00 0.00 30.03 1.85
4568 4887 1.207811 ACAATAAAAGGGGCATGCAGC 59.792 47.619 21.36 2.19 44.65 5.25
4663 4982 4.583073 TCATGAGAAAATCCTGCATGATGG 59.417 41.667 5.16 0.00 40.05 3.51
4692 5011 1.212688 AGACATCCCATGCCGATCAAA 59.787 47.619 0.00 0.00 0.00 2.69
4707 5026 0.324368 TGCACCGAGGACCTAGACAT 60.324 55.000 2.68 0.00 0.00 3.06
4778 5097 3.677648 AACCGACGGTCCCAGACG 61.678 66.667 22.00 0.00 33.12 4.18
4885 5204 2.656069 GCCTCGGCTCCAGTTACCA 61.656 63.158 0.00 0.00 38.26 3.25
4888 5207 3.458163 CGGCCTCGGCTCCAGTTA 61.458 66.667 8.00 0.00 41.60 2.24
5036 5355 3.852286 TCCGCTATCTTGCTTTTCGTAA 58.148 40.909 0.00 0.00 0.00 3.18
5039 5358 3.370978 TCTTTCCGCTATCTTGCTTTTCG 59.629 43.478 0.00 0.00 0.00 3.46
5050 5369 3.432326 GGAAGGTGACATCTTTCCGCTAT 60.432 47.826 1.68 0.00 0.00 2.97
5063 5382 8.138231 ATCTATCTGATGTTCCGGAAGGTGAC 62.138 46.154 19.50 6.72 42.76 3.67
5064 5383 6.162871 ATCTATCTGATGTTCCGGAAGGTGA 61.163 44.000 19.50 11.95 42.76 4.02
5069 5388 4.653801 TCCAATCTATCTGATGTTCCGGAA 59.346 41.667 14.35 14.35 35.21 4.30
5073 5392 5.558818 AGCATCCAATCTATCTGATGTTCC 58.441 41.667 0.00 0.00 37.51 3.62
5086 5405 0.822532 CTGCCCCTGAGCATCCAATC 60.823 60.000 0.00 0.00 43.09 2.67
5171 5499 0.719015 TCTCCCTGTCCTCCCATTCT 59.281 55.000 0.00 0.00 0.00 2.40
5207 5535 7.103641 TGTAAGCCAATCTTAACTCACTAAGG 58.896 38.462 0.00 0.00 38.86 2.69
5249 5577 3.306225 GCTCAAATTTGTCCAAGCATCCA 60.306 43.478 19.34 0.00 0.00 3.41
5255 5583 6.200854 GGTTAACAAGCTCAAATTTGTCCAAG 59.799 38.462 17.47 8.88 36.56 3.61
5261 5589 4.298332 AGCGGTTAACAAGCTCAAATTTG 58.702 39.130 18.35 12.15 36.33 2.32
5298 5626 2.145397 TGTTTGTGCAAGGGTGGTAA 57.855 45.000 0.00 0.00 0.00 2.85
5300 5628 1.412343 GATTGTTTGTGCAAGGGTGGT 59.588 47.619 0.00 0.00 0.00 4.16
5342 5670 3.408851 GGACCAACGACGAACCGC 61.409 66.667 0.00 0.00 0.00 5.68
5447 5775 4.950475 TGACTCTCGACAATAGAATCCAGT 59.050 41.667 0.00 0.00 0.00 4.00
5484 5812 4.452455 GGAACATTCGGATAACATGCTAGG 59.548 45.833 0.00 0.00 0.00 3.02
5503 5831 0.608640 TGAAGAGGCGGAAGAGGAAC 59.391 55.000 0.00 0.00 0.00 3.62
5723 6051 0.933097 AAGCGACATATGCAAGCTCG 59.067 50.000 16.93 12.67 37.15 5.03
5745 6073 1.750778 CCATTTCTTGCACCGGCTTAT 59.249 47.619 0.00 0.00 41.91 1.73
5753 6081 1.337110 GCGCGTTCCATTTCTTGCAC 61.337 55.000 8.43 0.00 0.00 4.57
5846 6174 7.675170 GCAAATTCTATGAAAGACTCGAACTCC 60.675 40.741 0.00 0.00 32.51 3.85
5885 6213 4.461431 TCGAGAGAGTGGTAAACATGCTTA 59.539 41.667 0.00 0.00 34.84 3.09
5992 6329 4.392047 ACACATGCACATCAGAAGAAGAA 58.608 39.130 0.00 0.00 0.00 2.52
5994 6331 4.761235 AACACATGCACATCAGAAGAAG 57.239 40.909 0.00 0.00 0.00 2.85
6003 6348 5.042593 CACACTGTAAAAACACATGCACAT 58.957 37.500 0.00 0.00 0.00 3.21
6120 6465 7.313646 CACCTTTAAGATCGTATATCCGTGAT 58.686 38.462 0.00 0.00 0.00 3.06
6246 6591 2.656560 AGAGATGTTTCGTTCTCCCG 57.343 50.000 0.00 0.00 39.36 5.14
6255 6600 0.449388 CCCGCTGCAAGAGATGTTTC 59.551 55.000 0.00 0.00 34.81 2.78
6456 6802 3.684788 AGTCGATGATGCCAAGTACAAAC 59.315 43.478 0.00 0.00 0.00 2.93
6477 6823 2.159043 CCATGTGTACTGCCTCAGGTAG 60.159 54.545 7.37 7.37 41.23 3.18
6621 6967 0.830648 TCCAATCATCTGGGACCGTC 59.169 55.000 0.00 0.00 37.06 4.79
6648 6994 3.049344 ACAGGTCCCTGAACTCTTCTTT 58.951 45.455 19.95 0.00 46.30 2.52
6700 7046 2.555757 GCTTCTGGCTGTCAATCTTTGT 59.444 45.455 0.00 0.00 38.06 2.83
6726 7072 2.028203 TGAGCATGTCTCGGTTTGATGA 60.028 45.455 11.03 0.00 44.86 2.92
6728 7074 2.768253 TGAGCATGTCTCGGTTTGAT 57.232 45.000 11.03 0.00 44.86 2.57
6731 7077 3.411446 TGAATTGAGCATGTCTCGGTTT 58.589 40.909 11.03 5.99 44.86 3.27
6733 7079 2.027745 ACTGAATTGAGCATGTCTCGGT 60.028 45.455 11.03 3.51 44.86 4.69
6739 7085 5.008331 AGTTCATCACTGAATTGAGCATGT 58.992 37.500 0.00 0.00 43.08 3.21
6757 7103 0.546122 ATAATGGCGAGGGCAGTTCA 59.454 50.000 0.00 0.00 42.43 3.18
6765 7111 4.000331 AGATGAACTCATAATGGCGAGG 58.000 45.455 0.00 0.00 36.57 4.63
6772 7118 5.643421 AGGCTGGAAGATGAACTCATAAT 57.357 39.130 0.00 0.00 36.57 1.28
6793 7140 6.369615 ACTGCTTGCAAAATGGCTAAAAATAG 59.630 34.615 0.00 0.00 34.04 1.73
6829 7177 7.392393 ACTTTACAAGTGAATTACATACACCCC 59.608 37.037 0.00 0.00 41.01 4.95
6871 7219 3.495983 CCCCCAAAAGTTTGCCTAAAAGG 60.496 47.826 0.00 0.00 38.80 3.11
6979 7329 9.353999 GCAGGAATGTAAAGAATTAAACGAATT 57.646 29.630 0.00 0.00 40.62 2.17
6983 7333 9.781834 TTATGCAGGAATGTAAAGAATTAAACG 57.218 29.630 0.00 0.00 0.00 3.60
7015 7365 2.514458 AGGTTAAGCCACTTCCCATG 57.486 50.000 0.00 0.00 40.61 3.66
7016 7366 3.542969 AAAGGTTAAGCCACTTCCCAT 57.457 42.857 0.00 0.00 40.61 4.00
7018 7368 4.341487 ACATAAAGGTTAAGCCACTTCCC 58.659 43.478 0.00 0.00 40.61 3.97
7071 7423 3.068448 TGCACATTGTCTTTCTGTTGCAT 59.932 39.130 0.00 0.00 0.00 3.96
7072 7424 2.426381 TGCACATTGTCTTTCTGTTGCA 59.574 40.909 0.00 0.00 0.00 4.08
7075 7427 4.398988 TCTGTTGCACATTGTCTTTCTGTT 59.601 37.500 0.00 0.00 0.00 3.16
7077 7429 4.556942 TCTGTTGCACATTGTCTTTCTG 57.443 40.909 0.00 0.00 0.00 3.02
7078 7430 5.779529 ATTCTGTTGCACATTGTCTTTCT 57.220 34.783 0.00 0.00 0.00 2.52
7079 7431 6.345250 CGAAATTCTGTTGCACATTGTCTTTC 60.345 38.462 0.00 0.00 0.00 2.62
7080 7432 5.459762 CGAAATTCTGTTGCACATTGTCTTT 59.540 36.000 0.00 0.00 0.00 2.52
7081 7433 4.977963 CGAAATTCTGTTGCACATTGTCTT 59.022 37.500 0.00 0.00 0.00 3.01
7082 7434 4.275689 TCGAAATTCTGTTGCACATTGTCT 59.724 37.500 0.00 0.00 0.00 3.41
7083 7435 4.536065 TCGAAATTCTGTTGCACATTGTC 58.464 39.130 0.00 0.00 0.00 3.18
7084 7436 4.566545 TCGAAATTCTGTTGCACATTGT 57.433 36.364 0.00 0.00 0.00 2.71
7085 7437 4.201551 GCATCGAAATTCTGTTGCACATTG 60.202 41.667 12.42 0.00 0.00 2.82
7086 7438 3.922240 GCATCGAAATTCTGTTGCACATT 59.078 39.130 12.42 0.00 0.00 2.71
7087 7439 3.057386 TGCATCGAAATTCTGTTGCACAT 60.057 39.130 14.57 0.00 35.36 3.21
7088 7440 2.292845 TGCATCGAAATTCTGTTGCACA 59.707 40.909 14.57 0.00 35.36 4.57
7089 7441 2.932498 TGCATCGAAATTCTGTTGCAC 58.068 42.857 14.57 0.00 35.36 4.57
7090 7442 3.639716 TTGCATCGAAATTCTGTTGCA 57.360 38.095 14.57 14.57 38.24 4.08
7091 7443 4.229096 TCTTTGCATCGAAATTCTGTTGC 58.771 39.130 11.20 11.20 0.00 4.17
7092 7444 6.033196 GTCATCTTTGCATCGAAATTCTGTTG 59.967 38.462 0.00 0.00 0.00 3.33
7093 7445 6.072286 AGTCATCTTTGCATCGAAATTCTGTT 60.072 34.615 0.00 0.00 0.00 3.16
7094 7446 5.413833 AGTCATCTTTGCATCGAAATTCTGT 59.586 36.000 0.00 0.00 0.00 3.41
7095 7447 5.877031 AGTCATCTTTGCATCGAAATTCTG 58.123 37.500 0.00 0.00 0.00 3.02
7096 7448 5.220548 CGAGTCATCTTTGCATCGAAATTCT 60.221 40.000 0.00 0.00 34.44 2.40
7112 7464 6.974932 AATGGCATTATGATACGAGTCATC 57.025 37.500 11.81 0.00 39.45 2.92
7114 7466 8.846943 AATTAATGGCATTATGATACGAGTCA 57.153 30.769 19.88 1.90 0.00 3.41
7131 7483 9.868277 TTAAACTGCTGGTATGAAAATTAATGG 57.132 29.630 0.00 0.00 0.00 3.16
7135 7487 8.644374 ACCTTAAACTGCTGGTATGAAAATTA 57.356 30.769 0.00 0.00 0.00 1.40
7139 7491 5.876357 AGACCTTAAACTGCTGGTATGAAA 58.124 37.500 0.00 0.00 32.30 2.69
7155 7507 5.366482 TGCTGCCATATGTTTAGACCTTA 57.634 39.130 1.24 0.00 0.00 2.69
7249 7606 8.964772 GTTCAGTTACTAGTTCTCATAGGGTTA 58.035 37.037 0.00 0.00 0.00 2.85
7268 7625 1.308998 CTGCGAGGGTTTGTTCAGTT 58.691 50.000 0.00 0.00 0.00 3.16
7284 7642 0.237498 GTTGTACTCGGGCAAACTGC 59.763 55.000 0.00 0.00 44.08 4.40
7294 7652 6.530181 TGTGAAGCTACATTATGTTGTACTCG 59.470 38.462 2.23 0.00 0.00 4.18
7434 7792 3.389656 AGGAAGATAAGGTCTAGCAAGGC 59.610 47.826 0.00 0.00 35.67 4.35
7614 7972 2.595655 CGGAACCCAATCTCCCCC 59.404 66.667 0.00 0.00 0.00 5.40
7623 7981 0.326927 GGTTGATCTTCCGGAACCCA 59.673 55.000 14.35 8.52 33.11 4.51
7640 7998 2.420043 CCGTGTTGGTCTCGTGGT 59.580 61.111 0.00 0.00 0.00 4.16
7644 8002 3.103911 GTCGCCGTGTTGGTCTCG 61.104 66.667 0.00 0.00 41.21 4.04
7653 8011 2.048597 TAGGTTGCTGTCGCCGTG 60.049 61.111 0.00 0.00 34.43 4.94
7656 8014 1.004918 ACTGTAGGTTGCTGTCGCC 60.005 57.895 0.00 0.00 34.43 5.54
7659 8017 2.543777 TTCCACTGTAGGTTGCTGTC 57.456 50.000 0.00 0.00 0.00 3.51
7688 8047 2.810852 CAAGCTTCTCCTCTGTTTCCAC 59.189 50.000 0.00 0.00 0.00 4.02
7690 8049 2.810852 CACAAGCTTCTCCTCTGTTTCC 59.189 50.000 0.00 0.00 0.00 3.13
7716 8075 6.904626 ACCATTCTGGACTATCTATGCTTTT 58.095 36.000 0.00 0.00 40.96 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.