Multiple sequence alignment - TraesCS2B01G620900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G620900 chr2B 100.000 4055 0 0 1 4055 795061828 795065882 0.000000e+00 7489.0
1 TraesCS2B01G620900 chr2D 90.564 3211 176 59 887 4053 637649854 637652981 0.000000e+00 4133.0
2 TraesCS2B01G620900 chr2D 83.247 579 57 22 275 847 637648885 637649429 2.820000e-136 496.0
3 TraesCS2B01G620900 chr2D 95.181 83 3 1 2879 2960 598020597 598020679 3.290000e-26 130.0
4 TraesCS2B01G620900 chr2D 93.976 83 4 1 2879 2960 598048788 598048870 1.530000e-24 124.0
5 TraesCS2B01G620900 chr2A 92.228 2419 159 17 1641 4053 762292798 762290403 0.000000e+00 3398.0
6 TraesCS2B01G620900 chr2A 82.833 1066 64 38 577 1593 762293797 762292802 0.000000e+00 845.0
7 TraesCS2B01G620900 chr7B 75.355 564 105 21 2511 3057 425716934 425717480 1.460000e-59 241.0
8 TraesCS2B01G620900 chr7B 85.514 214 31 0 2082 2295 425716448 425716661 1.470000e-54 224.0
9 TraesCS2B01G620900 chr7B 79.798 198 37 2 3855 4052 426113933 426114127 1.520000e-29 141.0
10 TraesCS2B01G620900 chr7B 95.062 81 3 1 1037 1117 425714133 425714212 4.250000e-25 126.0
11 TraesCS2B01G620900 chr7A 75.133 563 100 24 2515 3057 472196569 472197111 1.130000e-55 228.0
12 TraesCS2B01G620900 chr7A 85.514 214 31 0 2082 2295 472196078 472196291 1.470000e-54 224.0
13 TraesCS2B01G620900 chr7A 80.402 199 34 4 3855 4052 472571744 472571938 3.270000e-31 147.0
14 TraesCS2B01G620900 chr7A 95.062 81 3 1 1037 1117 472195029 472195108 4.250000e-25 126.0
15 TraesCS2B01G620900 chr7A 97.222 36 1 0 532 567 222232627 222232662 1.220000e-05 62.1
16 TraesCS2B01G620900 chr7D 85.514 214 31 0 2082 2295 411307678 411307891 1.470000e-54 224.0
17 TraesCS2B01G620900 chr7D 74.603 567 104 26 2511 3057 411308162 411308708 3.170000e-51 213.0
18 TraesCS2B01G620900 chr7D 80.402 199 34 4 3855 4052 411609591 411609785 3.270000e-31 147.0
19 TraesCS2B01G620900 chr7D 95.062 81 3 1 1037 1117 411306648 411306727 4.250000e-25 126.0
20 TraesCS2B01G620900 chr7D 100.000 36 0 0 532 567 566561056 566561091 2.620000e-07 67.6
21 TraesCS2B01G620900 chr7D 94.737 38 2 0 533 570 27423403 27423366 4.380000e-05 60.2
22 TraesCS2B01G620900 chr1A 97.500 40 1 0 532 571 251947941 251947902 7.270000e-08 69.4
23 TraesCS2B01G620900 chr1A 97.143 35 1 0 532 566 584835374 584835408 4.380000e-05 60.2
24 TraesCS2B01G620900 chr3D 97.222 36 1 0 532 567 588210502 588210537 1.220000e-05 62.1
25 TraesCS2B01G620900 chr5A 94.737 38 2 0 532 569 657076839 657076876 4.380000e-05 60.2
26 TraesCS2B01G620900 chr5D 97.059 34 1 0 534 567 560149926 560149893 1.570000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G620900 chr2B 795061828 795065882 4054 False 7489.0 7489 100.0000 1 4055 1 chr2B.!!$F1 4054
1 TraesCS2B01G620900 chr2D 637648885 637652981 4096 False 2314.5 4133 86.9055 275 4053 2 chr2D.!!$F3 3778
2 TraesCS2B01G620900 chr2A 762290403 762293797 3394 True 2121.5 3398 87.5305 577 4053 2 chr2A.!!$R1 3476

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 314 0.036010 CTCTGGCTCGGTTCCAATGT 60.036 55.0 0.00 0.00 32.41 2.71 F
1462 1899 0.108138 GATGTCGTCCCCTTCACCAG 60.108 60.0 0.00 0.00 0.00 4.00 F
1482 1919 0.108585 TTCTGCTCACCACTTCCACC 59.891 55.0 0.00 0.00 0.00 4.61 F
1659 2102 0.252239 AGAACAATGGCCCCCTTTCC 60.252 55.0 0.00 0.00 0.00 3.13 F
2871 3317 0.326927 GGTTGATCTTCCGGAACCCA 59.673 55.0 14.35 8.52 33.11 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1652 2095 0.035056 ACATTGCTCTCCGGAAAGGG 60.035 55.000 6.97 0.00 41.52 3.95 R
2838 3284 0.528901 TCAACCACGAGACCAACACG 60.529 55.000 0.00 0.00 38.45 4.49 R
2850 3296 1.450025 GGTTCCGGAAGATCAACCAC 58.550 55.000 19.50 2.37 38.57 4.16 R
2880 3326 1.525197 GCGCATCCAATTGCATTCATG 59.475 47.619 0.30 0.00 42.91 3.07 R
3969 4427 0.036010 AACTGGAGACATGGGCGAAG 60.036 55.000 0.00 0.00 41.51 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.938140 TTTTTGTACTGCCTATTATTCAGCT 57.062 32.000 0.00 0.00 0.00 4.24
29 30 9.627123 ATTTTTGTACTGCCTATTATTCAGCTA 57.373 29.630 0.00 0.00 0.00 3.32
30 31 8.662781 TTTTGTACTGCCTATTATTCAGCTAG 57.337 34.615 0.00 0.00 0.00 3.42
31 32 6.978674 TGTACTGCCTATTATTCAGCTAGT 57.021 37.500 0.00 0.00 0.00 2.57
32 33 7.361457 TGTACTGCCTATTATTCAGCTAGTT 57.639 36.000 0.00 0.00 0.00 2.24
33 34 8.473358 TGTACTGCCTATTATTCAGCTAGTTA 57.527 34.615 0.00 0.00 0.00 2.24
34 35 8.920174 TGTACTGCCTATTATTCAGCTAGTTAA 58.080 33.333 0.00 0.00 0.00 2.01
35 36 9.194271 GTACTGCCTATTATTCAGCTAGTTAAC 57.806 37.037 0.00 0.00 0.00 2.01
36 37 7.217906 ACTGCCTATTATTCAGCTAGTTAACC 58.782 38.462 0.88 0.00 0.00 2.85
37 38 6.220930 TGCCTATTATTCAGCTAGTTAACCG 58.779 40.000 0.88 0.00 0.00 4.44
38 39 6.041182 TGCCTATTATTCAGCTAGTTAACCGA 59.959 38.462 0.88 0.00 0.00 4.69
39 40 6.586844 GCCTATTATTCAGCTAGTTAACCGAG 59.413 42.308 0.88 1.27 0.00 4.63
40 41 7.523380 GCCTATTATTCAGCTAGTTAACCGAGA 60.523 40.741 0.88 0.00 0.00 4.04
41 42 8.358148 CCTATTATTCAGCTAGTTAACCGAGAA 58.642 37.037 0.88 0.94 0.00 2.87
42 43 9.745880 CTATTATTCAGCTAGTTAACCGAGAAA 57.254 33.333 0.88 0.00 0.00 2.52
44 45 6.969828 ATTCAGCTAGTTAACCGAGAAAAG 57.030 37.500 0.88 0.00 0.00 2.27
45 46 5.717078 TCAGCTAGTTAACCGAGAAAAGA 57.283 39.130 0.88 0.00 0.00 2.52
46 47 6.092955 TCAGCTAGTTAACCGAGAAAAGAA 57.907 37.500 0.88 0.00 0.00 2.52
47 48 6.518493 TCAGCTAGTTAACCGAGAAAAGAAA 58.482 36.000 0.88 0.00 0.00 2.52
48 49 6.987992 TCAGCTAGTTAACCGAGAAAAGAAAA 59.012 34.615 0.88 0.00 0.00 2.29
49 50 7.660208 TCAGCTAGTTAACCGAGAAAAGAAAAT 59.340 33.333 0.88 0.00 0.00 1.82
50 51 7.958025 CAGCTAGTTAACCGAGAAAAGAAAATC 59.042 37.037 0.88 0.00 0.00 2.17
51 52 7.660208 AGCTAGTTAACCGAGAAAAGAAAATCA 59.340 33.333 0.88 0.00 0.00 2.57
52 53 7.958025 GCTAGTTAACCGAGAAAAGAAAATCAG 59.042 37.037 0.88 0.00 0.00 2.90
53 54 6.669278 AGTTAACCGAGAAAAGAAAATCAGC 58.331 36.000 0.88 0.00 0.00 4.26
54 55 6.486993 AGTTAACCGAGAAAAGAAAATCAGCT 59.513 34.615 0.88 0.00 0.00 4.24
55 56 5.774498 AACCGAGAAAAGAAAATCAGCTT 57.226 34.783 0.00 0.00 0.00 3.74
56 57 6.877611 AACCGAGAAAAGAAAATCAGCTTA 57.122 33.333 0.00 0.00 0.00 3.09
57 58 6.487689 ACCGAGAAAAGAAAATCAGCTTAG 57.512 37.500 0.00 0.00 0.00 2.18
58 59 5.106515 ACCGAGAAAAGAAAATCAGCTTAGC 60.107 40.000 0.00 0.00 0.00 3.09
59 60 5.327891 CGAGAAAAGAAAATCAGCTTAGCC 58.672 41.667 0.00 0.00 0.00 3.93
60 61 5.106555 CGAGAAAAGAAAATCAGCTTAGCCA 60.107 40.000 0.00 0.00 0.00 4.75
61 62 6.018589 AGAAAAGAAAATCAGCTTAGCCAC 57.981 37.500 0.00 0.00 0.00 5.01
62 63 4.790765 AAAGAAAATCAGCTTAGCCACC 57.209 40.909 0.00 0.00 0.00 4.61
63 64 2.728007 AGAAAATCAGCTTAGCCACCC 58.272 47.619 0.00 0.00 0.00 4.61
64 65 1.401905 GAAAATCAGCTTAGCCACCCG 59.598 52.381 0.00 0.00 0.00 5.28
65 66 0.328258 AAATCAGCTTAGCCACCCGT 59.672 50.000 0.00 0.00 0.00 5.28
66 67 0.107654 AATCAGCTTAGCCACCCGTC 60.108 55.000 0.00 0.00 0.00 4.79
67 68 1.264749 ATCAGCTTAGCCACCCGTCA 61.265 55.000 0.00 0.00 0.00 4.35
68 69 1.741770 CAGCTTAGCCACCCGTCAC 60.742 63.158 0.00 0.00 0.00 3.67
69 70 2.436115 GCTTAGCCACCCGTCACC 60.436 66.667 0.00 0.00 0.00 4.02
70 71 3.065306 CTTAGCCACCCGTCACCA 58.935 61.111 0.00 0.00 0.00 4.17
71 72 1.602237 CTTAGCCACCCGTCACCAT 59.398 57.895 0.00 0.00 0.00 3.55
72 73 0.462047 CTTAGCCACCCGTCACCATC 60.462 60.000 0.00 0.00 0.00 3.51
73 74 2.233605 TTAGCCACCCGTCACCATCG 62.234 60.000 0.00 0.00 0.00 3.84
74 75 4.077184 GCCACCCGTCACCATCGA 62.077 66.667 0.00 0.00 0.00 3.59
75 76 2.125673 CCACCCGTCACCATCGAC 60.126 66.667 0.00 0.00 0.00 4.20
76 77 2.125673 CACCCGTCACCATCGACC 60.126 66.667 0.00 0.00 31.91 4.79
77 78 2.283676 ACCCGTCACCATCGACCT 60.284 61.111 0.00 0.00 31.91 3.85
78 79 2.348888 ACCCGTCACCATCGACCTC 61.349 63.158 0.00 0.00 31.91 3.85
79 80 2.494918 CCGTCACCATCGACCTCC 59.505 66.667 0.00 0.00 31.91 4.30
80 81 2.494918 CGTCACCATCGACCTCCC 59.505 66.667 0.00 0.00 31.91 4.30
81 82 2.348104 CGTCACCATCGACCTCCCA 61.348 63.158 0.00 0.00 31.91 4.37
82 83 1.218316 GTCACCATCGACCTCCCAC 59.782 63.158 0.00 0.00 0.00 4.61
83 84 1.987855 TCACCATCGACCTCCCACC 60.988 63.158 0.00 0.00 0.00 4.61
84 85 1.990060 CACCATCGACCTCCCACCT 60.990 63.158 0.00 0.00 0.00 4.00
85 86 1.686110 ACCATCGACCTCCCACCTC 60.686 63.158 0.00 0.00 0.00 3.85
86 87 1.381872 CCATCGACCTCCCACCTCT 60.382 63.158 0.00 0.00 0.00 3.69
87 88 1.395826 CCATCGACCTCCCACCTCTC 61.396 65.000 0.00 0.00 0.00 3.20
88 89 0.396417 CATCGACCTCCCACCTCTCT 60.396 60.000 0.00 0.00 0.00 3.10
89 90 0.106419 ATCGACCTCCCACCTCTCTC 60.106 60.000 0.00 0.00 0.00 3.20
90 91 1.755008 CGACCTCCCACCTCTCTCC 60.755 68.421 0.00 0.00 0.00 3.71
91 92 1.755008 GACCTCCCACCTCTCTCCG 60.755 68.421 0.00 0.00 0.00 4.63
92 93 2.360980 CCTCCCACCTCTCTCCGT 59.639 66.667 0.00 0.00 0.00 4.69
93 94 1.755008 CCTCCCACCTCTCTCCGTC 60.755 68.421 0.00 0.00 0.00 4.79
94 95 2.045242 TCCCACCTCTCTCCGTCG 60.045 66.667 0.00 0.00 0.00 5.12
95 96 3.827898 CCCACCTCTCTCCGTCGC 61.828 72.222 0.00 0.00 0.00 5.19
96 97 3.827898 CCACCTCTCTCCGTCGCC 61.828 72.222 0.00 0.00 0.00 5.54
97 98 2.752238 CACCTCTCTCCGTCGCCT 60.752 66.667 0.00 0.00 0.00 5.52
98 99 2.752238 ACCTCTCTCCGTCGCCTG 60.752 66.667 0.00 0.00 0.00 4.85
99 100 4.200283 CCTCTCTCCGTCGCCTGC 62.200 72.222 0.00 0.00 0.00 4.85
100 101 4.200283 CTCTCTCCGTCGCCTGCC 62.200 72.222 0.00 0.00 0.00 4.85
101 102 4.742649 TCTCTCCGTCGCCTGCCT 62.743 66.667 0.00 0.00 0.00 4.75
102 103 4.200283 CTCTCCGTCGCCTGCCTC 62.200 72.222 0.00 0.00 0.00 4.70
103 104 4.742649 TCTCCGTCGCCTGCCTCT 62.743 66.667 0.00 0.00 0.00 3.69
104 105 4.504916 CTCCGTCGCCTGCCTCTG 62.505 72.222 0.00 0.00 0.00 3.35
114 115 2.821685 TGCCTCTGCAGACACGTT 59.178 55.556 13.74 0.00 44.23 3.99
115 116 1.595109 TGCCTCTGCAGACACGTTG 60.595 57.895 13.74 1.36 44.23 4.10
116 117 2.320587 GCCTCTGCAGACACGTTGG 61.321 63.158 13.74 12.71 37.47 3.77
117 118 2.320587 CCTCTGCAGACACGTTGGC 61.321 63.158 13.74 0.00 0.00 4.52
118 119 2.280797 TCTGCAGACACGTTGGCC 60.281 61.111 13.74 0.00 0.00 5.36
119 120 2.591429 CTGCAGACACGTTGGCCA 60.591 61.111 8.42 0.00 0.00 5.36
120 121 2.896801 CTGCAGACACGTTGGCCAC 61.897 63.158 8.42 0.00 0.00 5.01
121 122 3.660111 GCAGACACGTTGGCCACC 61.660 66.667 3.88 0.00 0.00 4.61
122 123 2.203139 CAGACACGTTGGCCACCA 60.203 61.111 3.88 0.00 0.00 4.17
123 124 2.203153 AGACACGTTGGCCACCAC 60.203 61.111 3.88 0.00 30.78 4.16
124 125 3.284449 GACACGTTGGCCACCACC 61.284 66.667 3.88 0.00 30.78 4.61
125 126 4.887190 ACACGTTGGCCACCACCC 62.887 66.667 3.88 0.00 30.78 4.61
142 143 3.419759 CGTGGCCGGTGTTGCTAC 61.420 66.667 1.90 0.00 36.91 3.58
143 144 3.053896 GTGGCCGGTGTTGCTACC 61.054 66.667 1.90 0.00 34.50 3.18
144 145 3.246112 TGGCCGGTGTTGCTACCT 61.246 61.111 1.90 0.00 38.62 3.08
145 146 2.033602 GGCCGGTGTTGCTACCTT 59.966 61.111 1.90 0.00 38.62 3.50
146 147 2.332654 GGCCGGTGTTGCTACCTTG 61.333 63.158 1.90 0.00 38.62 3.61
147 148 2.978018 GCCGGTGTTGCTACCTTGC 61.978 63.158 1.90 0.00 38.62 4.01
148 149 1.599518 CCGGTGTTGCTACCTTGCA 60.600 57.895 0.00 0.00 41.65 4.08
149 150 1.574428 CGGTGTTGCTACCTTGCAC 59.426 57.895 0.00 0.00 43.20 4.57
150 151 0.884704 CGGTGTTGCTACCTTGCACT 60.885 55.000 0.00 0.00 43.20 4.40
151 152 1.318576 GGTGTTGCTACCTTGCACTT 58.681 50.000 0.00 0.00 43.20 3.16
152 153 1.266989 GGTGTTGCTACCTTGCACTTC 59.733 52.381 0.00 0.00 43.20 3.01
153 154 1.266989 GTGTTGCTACCTTGCACTTCC 59.733 52.381 0.00 0.00 43.20 3.46
154 155 0.517316 GTTGCTACCTTGCACTTCCG 59.483 55.000 0.00 0.00 43.20 4.30
155 156 0.107831 TTGCTACCTTGCACTTCCGT 59.892 50.000 0.00 0.00 43.20 4.69
156 157 0.970640 TGCTACCTTGCACTTCCGTA 59.029 50.000 0.00 0.00 38.12 4.02
157 158 1.553248 TGCTACCTTGCACTTCCGTAT 59.447 47.619 0.00 0.00 38.12 3.06
158 159 2.027561 TGCTACCTTGCACTTCCGTATT 60.028 45.455 0.00 0.00 38.12 1.89
159 160 2.351726 GCTACCTTGCACTTCCGTATTG 59.648 50.000 0.00 0.00 0.00 1.90
160 161 1.165270 ACCTTGCACTTCCGTATTGC 58.835 50.000 0.00 0.00 36.76 3.56
161 162 1.164411 CCTTGCACTTCCGTATTGCA 58.836 50.000 0.00 0.00 44.40 4.08
162 163 1.135689 CCTTGCACTTCCGTATTGCAC 60.136 52.381 0.00 0.00 45.70 4.57
163 164 0.515127 TTGCACTTCCGTATTGCACG 59.485 50.000 0.00 0.00 45.70 5.34
171 172 4.178861 GTATTGCACGAGCCGACA 57.821 55.556 1.39 0.00 41.13 4.35
172 173 1.708027 GTATTGCACGAGCCGACAC 59.292 57.895 1.39 0.00 41.13 3.67
173 174 1.011968 GTATTGCACGAGCCGACACA 61.012 55.000 1.39 0.00 41.13 3.72
174 175 0.108377 TATTGCACGAGCCGACACAT 60.108 50.000 1.39 0.00 41.13 3.21
175 176 1.361668 ATTGCACGAGCCGACACATC 61.362 55.000 1.39 0.00 41.13 3.06
176 177 2.125912 GCACGAGCCGACACATCT 60.126 61.111 0.00 0.00 33.58 2.90
177 178 1.738099 GCACGAGCCGACACATCTT 60.738 57.895 0.00 0.00 33.58 2.40
178 179 1.687494 GCACGAGCCGACACATCTTC 61.687 60.000 0.00 0.00 33.58 2.87
179 180 0.388520 CACGAGCCGACACATCTTCA 60.389 55.000 1.50 0.00 0.00 3.02
180 181 0.317160 ACGAGCCGACACATCTTCAA 59.683 50.000 1.50 0.00 0.00 2.69
181 182 0.716108 CGAGCCGACACATCTTCAAC 59.284 55.000 0.00 0.00 0.00 3.18
182 183 1.079503 GAGCCGACACATCTTCAACC 58.920 55.000 0.00 0.00 0.00 3.77
183 184 0.396435 AGCCGACACATCTTCAACCA 59.604 50.000 0.00 0.00 0.00 3.67
184 185 1.003580 AGCCGACACATCTTCAACCAT 59.996 47.619 0.00 0.00 0.00 3.55
185 186 1.398390 GCCGACACATCTTCAACCATC 59.602 52.381 0.00 0.00 0.00 3.51
186 187 2.009774 CCGACACATCTTCAACCATCC 58.990 52.381 0.00 0.00 0.00 3.51
187 188 2.009774 CGACACATCTTCAACCATCCC 58.990 52.381 0.00 0.00 0.00 3.85
188 189 2.355108 CGACACATCTTCAACCATCCCT 60.355 50.000 0.00 0.00 0.00 4.20
189 190 3.274288 GACACATCTTCAACCATCCCTC 58.726 50.000 0.00 0.00 0.00 4.30
190 191 2.915604 ACACATCTTCAACCATCCCTCT 59.084 45.455 0.00 0.00 0.00 3.69
191 192 4.104086 ACACATCTTCAACCATCCCTCTA 58.896 43.478 0.00 0.00 0.00 2.43
192 193 4.080863 ACACATCTTCAACCATCCCTCTAC 60.081 45.833 0.00 0.00 0.00 2.59
193 194 3.456277 ACATCTTCAACCATCCCTCTACC 59.544 47.826 0.00 0.00 0.00 3.18
194 195 2.478292 TCTTCAACCATCCCTCTACCC 58.522 52.381 0.00 0.00 0.00 3.69
195 196 2.045885 TCTTCAACCATCCCTCTACCCT 59.954 50.000 0.00 0.00 0.00 4.34
196 197 2.176247 TCAACCATCCCTCTACCCTC 57.824 55.000 0.00 0.00 0.00 4.30
197 198 1.651770 TCAACCATCCCTCTACCCTCT 59.348 52.381 0.00 0.00 0.00 3.69
198 199 2.043227 CAACCATCCCTCTACCCTCTC 58.957 57.143 0.00 0.00 0.00 3.20
199 200 0.563672 ACCATCCCTCTACCCTCTCC 59.436 60.000 0.00 0.00 0.00 3.71
200 201 0.178918 CCATCCCTCTACCCTCTCCC 60.179 65.000 0.00 0.00 0.00 4.30
201 202 0.863956 CATCCCTCTACCCTCTCCCT 59.136 60.000 0.00 0.00 0.00 4.20
202 203 1.163408 ATCCCTCTACCCTCTCCCTC 58.837 60.000 0.00 0.00 0.00 4.30
203 204 1.000041 TCCCTCTACCCTCTCCCTCC 61.000 65.000 0.00 0.00 0.00 4.30
204 205 1.002242 CCCTCTACCCTCTCCCTCCT 61.002 65.000 0.00 0.00 0.00 3.69
205 206 0.481128 CCTCTACCCTCTCCCTCCTC 59.519 65.000 0.00 0.00 0.00 3.71
206 207 1.529744 CTCTACCCTCTCCCTCCTCT 58.470 60.000 0.00 0.00 0.00 3.69
207 208 1.856920 CTCTACCCTCTCCCTCCTCTT 59.143 57.143 0.00 0.00 0.00 2.85
208 209 2.246327 CTCTACCCTCTCCCTCCTCTTT 59.754 54.545 0.00 0.00 0.00 2.52
209 210 2.660556 TCTACCCTCTCCCTCCTCTTTT 59.339 50.000 0.00 0.00 0.00 2.27
210 211 2.442262 ACCCTCTCCCTCCTCTTTTT 57.558 50.000 0.00 0.00 0.00 1.94
211 212 1.988846 ACCCTCTCCCTCCTCTTTTTG 59.011 52.381 0.00 0.00 0.00 2.44
212 213 2.269940 CCCTCTCCCTCCTCTTTTTGA 58.730 52.381 0.00 0.00 0.00 2.69
213 214 2.026729 CCCTCTCCCTCCTCTTTTTGAC 60.027 54.545 0.00 0.00 0.00 3.18
214 215 2.639839 CCTCTCCCTCCTCTTTTTGACA 59.360 50.000 0.00 0.00 0.00 3.58
215 216 3.558109 CCTCTCCCTCCTCTTTTTGACAC 60.558 52.174 0.00 0.00 0.00 3.67
216 217 2.372172 TCTCCCTCCTCTTTTTGACACC 59.628 50.000 0.00 0.00 0.00 4.16
217 218 1.071699 TCCCTCCTCTTTTTGACACCG 59.928 52.381 0.00 0.00 0.00 4.94
218 219 1.523758 CCTCCTCTTTTTGACACCGG 58.476 55.000 0.00 0.00 0.00 5.28
219 220 0.875059 CTCCTCTTTTTGACACCGGC 59.125 55.000 0.00 0.00 0.00 6.13
220 221 0.181587 TCCTCTTTTTGACACCGGCA 59.818 50.000 0.00 0.00 0.00 5.69
221 222 1.028905 CCTCTTTTTGACACCGGCAA 58.971 50.000 0.00 0.00 0.00 4.52
222 223 1.269051 CCTCTTTTTGACACCGGCAAC 60.269 52.381 0.00 0.00 0.00 4.17
223 224 0.741915 TCTTTTTGACACCGGCAACC 59.258 50.000 0.00 0.00 0.00 3.77
224 225 0.249280 CTTTTTGACACCGGCAACCC 60.249 55.000 0.00 0.00 0.00 4.11
225 226 1.677637 TTTTTGACACCGGCAACCCC 61.678 55.000 0.00 0.00 0.00 4.95
226 227 2.575455 TTTTGACACCGGCAACCCCT 62.575 55.000 0.00 0.00 0.00 4.79
227 228 2.969300 TTTGACACCGGCAACCCCTC 62.969 60.000 0.00 0.00 0.00 4.30
228 229 3.948719 GACACCGGCAACCCCTCA 61.949 66.667 0.00 0.00 0.00 3.86
229 230 4.265056 ACACCGGCAACCCCTCAC 62.265 66.667 0.00 0.00 0.00 3.51
230 231 3.953775 CACCGGCAACCCCTCACT 61.954 66.667 0.00 0.00 0.00 3.41
231 232 3.175710 ACCGGCAACCCCTCACTT 61.176 61.111 0.00 0.00 0.00 3.16
232 233 1.844289 ACCGGCAACCCCTCACTTA 60.844 57.895 0.00 0.00 0.00 2.24
233 234 1.205460 ACCGGCAACCCCTCACTTAT 61.205 55.000 0.00 0.00 0.00 1.73
234 235 0.748005 CCGGCAACCCCTCACTTATG 60.748 60.000 0.00 0.00 0.00 1.90
235 236 0.251916 CGGCAACCCCTCACTTATGA 59.748 55.000 0.00 0.00 0.00 2.15
236 237 1.751437 GGCAACCCCTCACTTATGAC 58.249 55.000 0.00 0.00 0.00 3.06
237 238 1.004277 GGCAACCCCTCACTTATGACA 59.996 52.381 0.00 0.00 0.00 3.58
238 239 2.084546 GCAACCCCTCACTTATGACAC 58.915 52.381 0.00 0.00 0.00 3.67
239 240 2.290323 GCAACCCCTCACTTATGACACT 60.290 50.000 0.00 0.00 0.00 3.55
240 241 3.810743 GCAACCCCTCACTTATGACACTT 60.811 47.826 0.00 0.00 0.00 3.16
241 242 3.703001 ACCCCTCACTTATGACACTTG 57.297 47.619 0.00 0.00 0.00 3.16
242 243 2.290323 ACCCCTCACTTATGACACTTGC 60.290 50.000 0.00 0.00 0.00 4.01
243 244 2.026822 CCCCTCACTTATGACACTTGCT 60.027 50.000 0.00 0.00 0.00 3.91
244 245 3.005554 CCCTCACTTATGACACTTGCTG 58.994 50.000 0.00 0.00 0.00 4.41
245 246 3.005554 CCTCACTTATGACACTTGCTGG 58.994 50.000 0.00 0.00 0.00 4.85
246 247 3.557898 CCTCACTTATGACACTTGCTGGT 60.558 47.826 0.00 0.00 0.00 4.00
247 248 3.664107 TCACTTATGACACTTGCTGGTC 58.336 45.455 0.00 0.00 34.63 4.02
248 249 2.744202 CACTTATGACACTTGCTGGTCC 59.256 50.000 0.00 0.00 33.09 4.46
249 250 2.290323 ACTTATGACACTTGCTGGTCCC 60.290 50.000 0.00 0.00 33.09 4.46
250 251 0.249120 TATGACACTTGCTGGTCCCG 59.751 55.000 0.00 0.00 33.09 5.14
251 252 3.050275 GACACTTGCTGGTCCCGC 61.050 66.667 0.00 0.00 0.00 6.13
252 253 3.537206 GACACTTGCTGGTCCCGCT 62.537 63.158 6.84 0.00 0.00 5.52
253 254 2.743928 CACTTGCTGGTCCCGCTC 60.744 66.667 6.84 0.00 0.00 5.03
254 255 4.021925 ACTTGCTGGTCCCGCTCC 62.022 66.667 6.84 0.00 0.00 4.70
255 256 3.710722 CTTGCTGGTCCCGCTCCT 61.711 66.667 6.84 0.00 0.00 3.69
256 257 3.672295 CTTGCTGGTCCCGCTCCTC 62.672 68.421 6.84 0.00 0.00 3.71
257 258 4.704103 TGCTGGTCCCGCTCCTCT 62.704 66.667 6.84 0.00 0.00 3.69
258 259 3.394836 GCTGGTCCCGCTCCTCTT 61.395 66.667 0.00 0.00 0.00 2.85
259 260 2.896443 CTGGTCCCGCTCCTCTTC 59.104 66.667 0.00 0.00 0.00 2.87
260 261 1.684049 CTGGTCCCGCTCCTCTTCT 60.684 63.158 0.00 0.00 0.00 2.85
261 262 0.395862 CTGGTCCCGCTCCTCTTCTA 60.396 60.000 0.00 0.00 0.00 2.10
262 263 0.683504 TGGTCCCGCTCCTCTTCTAC 60.684 60.000 0.00 0.00 0.00 2.59
263 264 1.726533 GGTCCCGCTCCTCTTCTACG 61.727 65.000 0.00 0.00 0.00 3.51
264 265 1.453379 TCCCGCTCCTCTTCTACGG 60.453 63.158 0.00 0.00 43.44 4.02
265 266 1.753463 CCCGCTCCTCTTCTACGGT 60.753 63.158 0.00 0.00 42.29 4.83
266 267 1.321074 CCCGCTCCTCTTCTACGGTT 61.321 60.000 0.00 0.00 42.29 4.44
267 268 1.386533 CCGCTCCTCTTCTACGGTTA 58.613 55.000 0.00 0.00 39.05 2.85
268 269 1.065251 CCGCTCCTCTTCTACGGTTAC 59.935 57.143 0.00 0.00 39.05 2.50
269 270 2.015587 CGCTCCTCTTCTACGGTTACT 58.984 52.381 0.00 0.00 0.00 2.24
270 271 2.223294 CGCTCCTCTTCTACGGTTACTG 60.223 54.545 0.00 0.00 0.00 2.74
271 272 2.479901 GCTCCTCTTCTACGGTTACTGC 60.480 54.545 0.00 0.00 0.00 4.40
272 273 1.741706 TCCTCTTCTACGGTTACTGCG 59.258 52.381 0.00 0.00 0.00 5.18
273 274 1.546834 CTCTTCTACGGTTACTGCGC 58.453 55.000 0.00 0.00 0.00 6.09
288 289 3.133464 CGCGGCCAACCATGACAT 61.133 61.111 2.24 0.00 34.57 3.06
290 291 3.101209 CGGCCAACCATGACATCG 58.899 61.111 2.24 0.00 34.57 3.84
292 293 2.045708 GGCCAACCATGACATCGCA 61.046 57.895 0.00 0.00 35.26 5.10
297 298 2.558378 CAACCATGACATCGCATCTCT 58.442 47.619 0.00 0.00 0.00 3.10
306 307 1.680522 ATCGCATCTCTGGCTCGGTT 61.681 55.000 0.00 0.00 0.00 4.44
309 310 1.900351 CATCTCTGGCTCGGTTCCA 59.100 57.895 0.00 0.00 0.00 3.53
310 311 0.250234 CATCTCTGGCTCGGTTCCAA 59.750 55.000 0.00 0.00 32.41 3.53
313 314 0.036010 CTCTGGCTCGGTTCCAATGT 60.036 55.000 0.00 0.00 32.41 2.71
320 321 0.245539 TCGGTTCCAATGTCGTCTCC 59.754 55.000 0.00 0.00 0.00 3.71
326 327 0.713883 CCAATGTCGTCTCCGAAACG 59.286 55.000 0.00 0.00 46.26 3.60
333 334 1.866925 GTCTCCGAAACGCCAAAGG 59.133 57.895 0.00 0.00 0.00 3.11
336 337 0.666374 CTCCGAAACGCCAAAGGTTT 59.334 50.000 0.00 0.00 40.11 3.27
350 352 2.421220 GGTTTTGGCCAACCGAAGA 58.579 52.632 20.35 0.00 40.59 2.87
355 357 1.750193 TTGGCCAACCGAAGATCATC 58.250 50.000 16.05 0.00 39.70 2.92
357 359 1.004161 TGGCCAACCGAAGATCATCAA 59.996 47.619 0.61 0.00 39.70 2.57
359 361 2.159379 GGCCAACCGAAGATCATCAAAC 60.159 50.000 0.00 0.00 0.00 2.93
360 362 2.487762 GCCAACCGAAGATCATCAAACA 59.512 45.455 0.00 0.00 0.00 2.83
361 363 3.670627 GCCAACCGAAGATCATCAAACAC 60.671 47.826 0.00 0.00 0.00 3.32
364 366 4.952262 ACCGAAGATCATCAAACACATG 57.048 40.909 0.00 0.00 0.00 3.21
365 367 4.326826 ACCGAAGATCATCAAACACATGT 58.673 39.130 0.00 0.00 0.00 3.21
366 368 4.761739 ACCGAAGATCATCAAACACATGTT 59.238 37.500 0.00 0.00 40.50 2.71
368 370 6.151691 CCGAAGATCATCAAACACATGTTTT 58.848 36.000 7.26 0.00 45.07 2.43
369 371 6.306356 CCGAAGATCATCAAACACATGTTTTC 59.694 38.462 7.26 3.15 45.07 2.29
370 372 6.306356 CGAAGATCATCAAACACATGTTTTCC 59.694 38.462 7.26 0.00 45.07 3.13
371 373 6.029346 AGATCATCAAACACATGTTTTCCC 57.971 37.500 7.26 0.00 45.07 3.97
372 374 4.599047 TCATCAAACACATGTTTTCCCC 57.401 40.909 7.26 0.00 45.07 4.81
373 375 3.323403 TCATCAAACACATGTTTTCCCCC 59.677 43.478 7.26 0.00 45.07 5.40
394 396 5.181748 CCCCTTATTCTCTCTGACAAACAG 58.818 45.833 0.00 0.00 46.97 3.16
414 416 6.017400 ACAGATTGCACAGAAAAATACCAG 57.983 37.500 0.00 0.00 0.00 4.00
415 417 4.860907 CAGATTGCACAGAAAAATACCAGC 59.139 41.667 0.00 0.00 0.00 4.85
417 419 4.662468 TTGCACAGAAAAATACCAGCAA 57.338 36.364 0.00 0.00 38.28 3.91
432 434 5.904362 ACCAGCAATTCATTTTACCTCTC 57.096 39.130 0.00 0.00 0.00 3.20
435 437 6.095377 CCAGCAATTCATTTTACCTCTCAAC 58.905 40.000 0.00 0.00 0.00 3.18
446 448 3.261981 ACCTCTCAACACGACTTTGTT 57.738 42.857 0.00 0.00 40.46 2.83
455 457 2.217750 CACGACTTTGTTGTGGATGGA 58.782 47.619 9.55 0.00 42.42 3.41
457 459 1.535462 CGACTTTGTTGTGGATGGACC 59.465 52.381 0.00 0.00 39.54 4.46
478 480 4.336993 ACCAGCGTTTTATGTTGTTCTCAA 59.663 37.500 0.00 0.00 0.00 3.02
494 496 2.005537 CAAGCGCGTGAGTTGTTGC 61.006 57.895 19.03 0.00 0.00 4.17
501 503 2.193536 GTGAGTTGTTGCCGGCCTT 61.194 57.895 26.77 2.14 0.00 4.35
512 514 1.077787 CCGGCCTTGTGCATCCTAA 60.078 57.895 0.00 0.00 43.89 2.69
513 515 0.466189 CCGGCCTTGTGCATCCTAAT 60.466 55.000 0.00 0.00 43.89 1.73
523 525 7.092716 CCTTGTGCATCCTAATTATTTATGGC 58.907 38.462 0.00 0.00 0.00 4.40
526 528 5.009631 TGCATCCTAATTATTTATGGCGCT 58.990 37.500 7.64 0.00 0.00 5.92
530 532 5.245531 TCCTAATTATTTATGGCGCTGAGG 58.754 41.667 7.64 0.00 0.00 3.86
531 533 5.003804 CCTAATTATTTATGGCGCTGAGGT 58.996 41.667 7.64 0.00 0.00 3.85
532 534 4.836125 AATTATTTATGGCGCTGAGGTG 57.164 40.909 7.64 0.00 0.00 4.00
542 544 1.645034 CGCTGAGGTGTATCCACTTG 58.355 55.000 0.00 0.00 41.53 3.16
543 545 1.204704 CGCTGAGGTGTATCCACTTGA 59.795 52.381 0.00 0.00 41.53 3.02
555 557 7.282224 GGTGTATCCACTTGATGCTACATTTTA 59.718 37.037 0.00 0.00 41.53 1.52
658 662 6.954352 AGGTACAAGGAGAAAAGTATTCCT 57.046 37.500 0.00 0.00 43.05 3.36
749 753 3.348647 TCCATTTGGATTCAGAGCGAA 57.651 42.857 0.00 0.00 39.78 4.70
784 790 3.470888 GCGGCAGCTTCCTCCCTA 61.471 66.667 0.00 0.00 41.01 3.53
837 846 2.989824 CCACTGACGGACGGGACT 60.990 66.667 0.00 0.00 0.00 3.85
852 861 1.021920 GGACTCGGCCTTCTTCTTGC 61.022 60.000 0.00 0.00 0.00 4.01
865 874 1.208165 TTCTTGCCTTCCTCTCCCCC 61.208 60.000 0.00 0.00 0.00 5.40
945 1340 2.820037 GGAAGGAGAAAGGCCGCG 60.820 66.667 0.00 0.00 0.00 6.46
950 1345 1.671379 GGAGAAAGGCCGCGTCTTT 60.671 57.895 19.80 19.80 40.36 2.52
1011 1408 1.595382 GATTGGGATGGAGTCGGCG 60.595 63.158 0.00 0.00 0.00 6.46
1098 1495 4.154015 GTCACCGTCATCATCATCAACAAA 59.846 41.667 0.00 0.00 0.00 2.83
1117 1514 3.334769 TGGATCTTCCAGGTACCCC 57.665 57.895 8.74 0.00 42.67 4.95
1118 1515 0.689745 TGGATCTTCCAGGTACCCCG 60.690 60.000 8.74 0.00 42.67 5.73
1119 1516 0.690077 GGATCTTCCAGGTACCCCGT 60.690 60.000 8.74 0.00 36.28 5.28
1120 1517 1.412074 GGATCTTCCAGGTACCCCGTA 60.412 57.143 8.74 0.00 36.28 4.02
1121 1518 1.685517 GATCTTCCAGGTACCCCGTAC 59.314 57.143 8.74 0.00 38.19 3.67
1163 1560 3.983494 ATCTCATCTCGCCGCCGG 61.983 66.667 0.00 0.00 34.56 6.13
1189 1600 2.035632 GTCTCCATTCCTCGGATCTGT 58.964 52.381 0.42 0.00 0.00 3.41
1191 1602 2.034878 CTCCATTCCTCGGATCTGTGA 58.965 52.381 5.15 0.00 0.00 3.58
1287 1710 2.432456 TAGCAACGCGTGGCTCTG 60.432 61.111 42.32 23.38 41.41 3.35
1288 1711 3.220999 TAGCAACGCGTGGCTCTGT 62.221 57.895 42.32 23.09 41.41 3.41
1411 1848 3.499050 CTGCCTCTGCTGCACATC 58.501 61.111 0.00 0.00 38.71 3.06
1448 1885 5.702670 TGGTTCAGTCTGATTTTGAGATGTC 59.297 40.000 2.68 0.00 0.00 3.06
1459 1896 0.895530 TGAGATGTCGTCCCCTTCAC 59.104 55.000 0.00 0.00 0.00 3.18
1462 1899 0.108138 GATGTCGTCCCCTTCACCAG 60.108 60.000 0.00 0.00 0.00 4.00
1466 1903 0.471211 TCGTCCCCTTCACCAGTTCT 60.471 55.000 0.00 0.00 0.00 3.01
1479 1916 1.517242 CAGTTCTGCTCACCACTTCC 58.483 55.000 0.00 0.00 0.00 3.46
1480 1917 1.131638 AGTTCTGCTCACCACTTCCA 58.868 50.000 0.00 0.00 0.00 3.53
1482 1919 0.108585 TTCTGCTCACCACTTCCACC 59.891 55.000 0.00 0.00 0.00 4.61
1485 1922 1.600916 GCTCACCACTTCCACCCAC 60.601 63.158 0.00 0.00 0.00 4.61
1509 1946 6.325804 ACCCACCTGTATGTAATCCTTAGTAC 59.674 42.308 0.00 0.00 0.00 2.73
1554 1997 2.693267 ACCCGATTAGCTCTTGGTTC 57.307 50.000 0.00 0.00 0.00 3.62
1565 2008 0.669619 TCTTGGTTCACAGCGTCGTA 59.330 50.000 0.00 0.00 0.00 3.43
1567 2010 1.654105 CTTGGTTCACAGCGTCGTATC 59.346 52.381 0.00 0.00 0.00 2.24
1593 2036 3.788797 GCCGCGAAAATGGAATGAACTAG 60.789 47.826 8.23 0.00 0.00 2.57
1595 2038 4.494199 CCGCGAAAATGGAATGAACTAGTC 60.494 45.833 8.23 0.00 0.00 2.59
1596 2039 4.494199 CGCGAAAATGGAATGAACTAGTCC 60.494 45.833 0.00 0.00 43.83 3.85
1597 2040 4.201920 GCGAAAATGGAATGAACTAGTCCC 60.202 45.833 0.00 0.00 42.90 4.46
1598 2041 4.034048 CGAAAATGGAATGAACTAGTCCCG 59.966 45.833 0.00 0.00 42.90 5.14
1599 2042 4.837093 AAATGGAATGAACTAGTCCCGA 57.163 40.909 0.00 0.00 42.90 5.14
1601 2044 5.373812 AATGGAATGAACTAGTCCCGAAT 57.626 39.130 0.00 0.00 42.90 3.34
1602 2045 4.137116 TGGAATGAACTAGTCCCGAATG 57.863 45.455 0.00 0.00 42.90 2.67
1603 2046 3.772572 TGGAATGAACTAGTCCCGAATGA 59.227 43.478 0.00 0.00 42.90 2.57
1604 2047 4.408921 TGGAATGAACTAGTCCCGAATGAT 59.591 41.667 0.00 0.00 42.90 2.45
1605 2048 5.600898 TGGAATGAACTAGTCCCGAATGATA 59.399 40.000 0.00 0.00 42.90 2.15
1606 2049 5.927115 GGAATGAACTAGTCCCGAATGATAC 59.073 44.000 0.00 0.00 37.58 2.24
1607 2050 4.563337 TGAACTAGTCCCGAATGATACG 57.437 45.455 0.00 0.00 0.00 3.06
1608 2051 4.201657 TGAACTAGTCCCGAATGATACGA 58.798 43.478 0.00 0.00 0.00 3.43
1609 2052 4.825634 TGAACTAGTCCCGAATGATACGAT 59.174 41.667 0.00 0.00 0.00 3.73
1610 2053 5.301045 TGAACTAGTCCCGAATGATACGATT 59.699 40.000 0.00 0.00 0.00 3.34
1611 2054 5.373981 ACTAGTCCCGAATGATACGATTC 57.626 43.478 0.00 0.00 0.00 2.52
1612 2055 4.825634 ACTAGTCCCGAATGATACGATTCA 59.174 41.667 0.00 0.00 32.67 2.57
1613 2056 4.873746 AGTCCCGAATGATACGATTCAT 57.126 40.909 0.00 0.00 37.96 2.57
1614 2057 5.215252 AGTCCCGAATGATACGATTCATT 57.785 39.130 14.44 14.44 46.39 2.57
1615 2058 5.611374 AGTCCCGAATGATACGATTCATTT 58.389 37.500 15.28 4.05 44.35 2.32
1616 2059 5.466728 AGTCCCGAATGATACGATTCATTTG 59.533 40.000 17.86 17.86 44.35 2.32
1652 2095 0.971959 TGGCATGAGAACAATGGCCC 60.972 55.000 0.00 0.00 39.40 5.80
1659 2102 0.252239 AGAACAATGGCCCCCTTTCC 60.252 55.000 0.00 0.00 0.00 3.13
1699 2142 5.654650 TGTTTGGTGATATGACATTAACCCC 59.345 40.000 0.00 0.00 0.00 4.95
1700 2143 4.447138 TGGTGATATGACATTAACCCCC 57.553 45.455 0.00 0.00 0.00 5.40
1771 2214 1.482182 TGCGTCCACTTCATATGCTCT 59.518 47.619 0.00 0.00 0.00 4.09
1774 2217 3.126831 CGTCCACTTCATATGCTCTTCC 58.873 50.000 0.00 0.00 0.00 3.46
1783 2226 1.053835 TATGCTCTTCCATCGGGGCA 61.054 55.000 0.00 0.00 36.21 5.36
1974 2417 2.247790 CTGCAACCACAGGTACAGC 58.752 57.895 0.00 4.38 34.70 4.40
1977 2420 0.817634 GCAACCACAGGTACAGCACA 60.818 55.000 0.00 0.00 33.12 4.57
2068 2512 5.180492 TGCCTATTAACAACTTTTCTGACGG 59.820 40.000 0.00 0.00 0.00 4.79
2118 2562 1.032014 TGGTTTGGAGCAAGCACTTC 58.968 50.000 0.00 0.00 0.00 3.01
2244 2688 3.701604 CTGCCTCGCCACGTCTACC 62.702 68.421 0.00 0.00 0.00 3.18
2426 2871 6.727824 TTTGAGTTCGAGGATCAAAAGATC 57.272 37.500 15.26 0.00 39.34 2.75
2449 2894 4.698583 AGTTCTTACTGTAGTGCTACCG 57.301 45.455 6.87 3.51 35.26 4.02
2480 2925 2.028930 AGTCCTGTAAGTTCTTGCCTCG 60.029 50.000 0.00 0.00 0.00 4.63
2495 2940 3.995199 TGCCTCGGTCAGATGATTTATC 58.005 45.455 0.00 0.00 35.97 1.75
2568 3013 1.694150 GCCACCATGATACTGGCTCTA 59.306 52.381 13.43 0.00 46.05 2.43
2616 3061 3.096461 CGTAATCGACTGGTTCTACACG 58.904 50.000 0.00 0.00 39.71 4.49
2718 3163 0.327924 TGATCCATTCAACCACCGCT 59.672 50.000 0.00 0.00 0.00 5.52
2778 3223 6.904626 ACCATTCTGGACTATCTATGCTTTT 58.095 36.000 0.00 0.00 40.96 2.27
2804 3249 2.810852 CACAAGCTTCTCCTCTGTTTCC 59.189 50.000 0.00 0.00 0.00 3.13
2806 3251 2.810852 CAAGCTTCTCCTCTGTTTCCAC 59.189 50.000 0.00 0.00 0.00 4.02
2835 3281 2.543777 TTCCACTGTAGGTTGCTGTC 57.456 50.000 0.00 0.00 0.00 3.51
2838 3284 1.004918 ACTGTAGGTTGCTGTCGCC 60.005 57.895 0.00 0.00 34.43 5.54
2841 3287 2.048597 TAGGTTGCTGTCGCCGTG 60.049 61.111 0.00 0.00 34.43 4.94
2850 3296 3.103911 GTCGCCGTGTTGGTCTCG 61.104 66.667 0.00 0.00 41.21 4.04
2854 3300 2.420043 CCGTGTTGGTCTCGTGGT 59.580 61.111 0.00 0.00 0.00 4.16
2871 3317 0.326927 GGTTGATCTTCCGGAACCCA 59.673 55.000 14.35 8.52 33.11 4.51
2880 3326 2.595655 CGGAACCCAATCTCCCCC 59.404 66.667 0.00 0.00 0.00 5.40
3060 3506 3.389656 AGGAAGATAAGGTCTAGCAAGGC 59.610 47.826 0.00 0.00 35.67 4.35
3200 3646 6.530181 TGTGAAGCTACATTATGTTGTACTCG 59.470 38.462 2.23 0.00 0.00 4.18
3210 3656 0.237498 GTTGTACTCGGGCAAACTGC 59.763 55.000 0.00 0.00 44.08 4.40
3226 3673 1.308998 CTGCGAGGGTTTGTTCAGTT 58.691 50.000 0.00 0.00 0.00 3.16
3245 3692 8.964772 GTTCAGTTACTAGTTCTCATAGGGTTA 58.035 37.037 0.00 0.00 0.00 2.85
3339 3791 5.366482 TGCTGCCATATGTTTAGACCTTA 57.634 39.130 1.24 0.00 0.00 2.69
3355 3807 5.876357 AGACCTTAAACTGCTGGTATGAAA 58.124 37.500 0.00 0.00 32.30 2.69
3359 3811 8.644374 ACCTTAAACTGCTGGTATGAAAATTA 57.356 30.769 0.00 0.00 0.00 1.40
3363 3815 9.868277 TTAAACTGCTGGTATGAAAATTAATGG 57.132 29.630 0.00 0.00 0.00 3.16
3380 3832 8.846943 AATTAATGGCATTATGATACGAGTCA 57.153 30.769 19.88 1.90 0.00 3.41
3382 3834 6.974932 AATGGCATTATGATACGAGTCATC 57.025 37.500 11.81 0.00 39.45 2.92
3398 3850 5.220548 CGAGTCATCTTTGCATCGAAATTCT 60.221 40.000 0.00 0.00 34.44 2.40
3399 3851 5.877031 AGTCATCTTTGCATCGAAATTCTG 58.123 37.500 0.00 0.00 0.00 3.02
3401 3853 6.072286 AGTCATCTTTGCATCGAAATTCTGTT 60.072 34.615 0.00 0.00 0.00 3.16
3404 3856 3.639716 TTGCATCGAAATTCTGTTGCA 57.360 38.095 14.57 14.57 38.24 4.08
3406 3858 2.292845 TGCATCGAAATTCTGTTGCACA 59.707 40.909 14.57 0.00 35.36 4.57
3407 3859 3.057386 TGCATCGAAATTCTGTTGCACAT 60.057 39.130 14.57 0.00 35.36 3.21
3408 3860 3.922240 GCATCGAAATTCTGTTGCACATT 59.078 39.130 12.42 0.00 0.00 2.71
3409 3861 4.201551 GCATCGAAATTCTGTTGCACATTG 60.202 41.667 12.42 0.00 0.00 2.82
3410 3862 4.566545 TCGAAATTCTGTTGCACATTGT 57.433 36.364 0.00 0.00 0.00 2.71
3411 3863 4.536065 TCGAAATTCTGTTGCACATTGTC 58.464 39.130 0.00 0.00 0.00 3.18
3412 3864 4.275689 TCGAAATTCTGTTGCACATTGTCT 59.724 37.500 0.00 0.00 0.00 3.41
3413 3865 4.977963 CGAAATTCTGTTGCACATTGTCTT 59.022 37.500 0.00 0.00 0.00 3.01
3414 3866 5.459762 CGAAATTCTGTTGCACATTGTCTTT 59.540 36.000 0.00 0.00 0.00 2.52
3415 3867 6.345250 CGAAATTCTGTTGCACATTGTCTTTC 60.345 38.462 0.00 0.00 0.00 2.62
3416 3868 5.779529 ATTCTGTTGCACATTGTCTTTCT 57.220 34.783 0.00 0.00 0.00 2.52
3417 3869 4.556942 TCTGTTGCACATTGTCTTTCTG 57.443 40.909 0.00 0.00 0.00 3.02
3418 3870 3.947196 TCTGTTGCACATTGTCTTTCTGT 59.053 39.130 0.00 0.00 0.00 3.41
3419 3871 4.398988 TCTGTTGCACATTGTCTTTCTGTT 59.601 37.500 0.00 0.00 0.00 3.16
3420 3872 4.422840 TGTTGCACATTGTCTTTCTGTTG 58.577 39.130 0.00 0.00 0.00 3.33
3421 3873 3.082698 TGCACATTGTCTTTCTGTTGC 57.917 42.857 0.00 0.00 0.00 4.17
3422 3874 2.426381 TGCACATTGTCTTTCTGTTGCA 59.574 40.909 0.00 0.00 0.00 4.08
3423 3875 3.068448 TGCACATTGTCTTTCTGTTGCAT 59.932 39.130 0.00 0.00 0.00 3.96
3476 3930 4.341487 ACATAAAGGTTAAGCCACTTCCC 58.659 43.478 0.00 0.00 40.61 3.97
3478 3932 3.542969 AAAGGTTAAGCCACTTCCCAT 57.457 42.857 0.00 0.00 40.61 4.00
3479 3933 2.514458 AGGTTAAGCCACTTCCCATG 57.486 50.000 0.00 0.00 40.61 3.66
3511 3965 9.781834 TTATGCAGGAATGTAAAGAATTAAACG 57.218 29.630 0.00 0.00 0.00 3.60
3515 3969 9.353999 GCAGGAATGTAAAGAATTAAACGAATT 57.646 29.630 0.00 0.00 40.62 2.17
3623 4079 3.495983 CCCCCAAAAGTTTGCCTAAAAGG 60.496 47.826 0.00 0.00 38.80 3.11
3665 4121 7.392393 ACTTTACAAGTGAATTACATACACCCC 59.608 37.037 0.00 0.00 41.01 4.95
3701 4158 6.369615 ACTGCTTGCAAAATGGCTAAAAATAG 59.630 34.615 0.00 0.00 34.04 1.73
3722 4180 5.643421 AGGCTGGAAGATGAACTCATAAT 57.357 39.130 0.00 0.00 36.57 1.28
3729 4187 4.000331 AGATGAACTCATAATGGCGAGG 58.000 45.455 0.00 0.00 36.57 4.63
3737 4195 0.546122 ATAATGGCGAGGGCAGTTCA 59.454 50.000 0.00 0.00 42.43 3.18
3755 4213 5.008331 AGTTCATCACTGAATTGAGCATGT 58.992 37.500 0.00 0.00 43.08 3.21
3761 4219 2.027745 ACTGAATTGAGCATGTCTCGGT 60.028 45.455 11.03 3.51 44.86 4.69
3763 4221 3.411446 TGAATTGAGCATGTCTCGGTTT 58.589 40.909 11.03 5.99 44.86 3.27
3766 4224 2.768253 TGAGCATGTCTCGGTTTGAT 57.232 45.000 11.03 0.00 44.86 2.57
3768 4226 2.028203 TGAGCATGTCTCGGTTTGATGA 60.028 45.455 11.03 0.00 44.86 2.92
3794 4252 2.555757 GCTTCTGGCTGTCAATCTTTGT 59.444 45.455 0.00 0.00 38.06 2.83
3846 4304 3.049344 ACAGGTCCCTGAACTCTTCTTT 58.951 45.455 19.95 0.00 46.30 2.52
3873 4331 0.830648 TCCAATCATCTGGGACCGTC 59.169 55.000 0.00 0.00 37.06 4.79
3930 4388 3.655777 TCTTGTACTCCCTGGGTGAAATT 59.344 43.478 21.06 1.52 0.00 1.82
3951 4409 1.000955 ACTGTCGGCGACTCATTCTTT 59.999 47.619 36.17 11.93 33.15 2.52
3969 4427 0.033504 TTGGCACCACGAGAGAAGTC 59.966 55.000 0.00 0.00 0.00 3.01
4017 4475 2.159043 CCATGTGTACTGCCTCAGGTAG 60.159 54.545 7.37 7.37 41.23 3.18
4038 4496 3.684788 AGTCGATGATGCCAAGTACAAAC 59.315 43.478 0.00 0.00 0.00 2.93
4053 4511 5.816919 AGTACAAACTCATGGTTTTGTTCG 58.183 37.500 22.58 9.97 44.77 3.95
4054 4512 4.712122 ACAAACTCATGGTTTTGTTCGT 57.288 36.364 15.75 6.76 44.77 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.525290 AGCTGAATAATAGGCAGTACAAAAAT 57.475 30.769 0.00 0.00 32.39 1.82
5 6 8.265055 ACTAGCTGAATAATAGGCAGTACAAAA 58.735 33.333 0.00 0.00 32.39 2.44
9 10 9.194271 GTTAACTAGCTGAATAATAGGCAGTAC 57.806 37.037 0.00 0.00 32.39 2.73
11 12 7.217906 GGTTAACTAGCTGAATAATAGGCAGT 58.782 38.462 5.42 0.00 32.39 4.40
12 13 6.366332 CGGTTAACTAGCTGAATAATAGGCAG 59.634 42.308 5.42 0.00 0.00 4.85
13 14 6.041182 TCGGTTAACTAGCTGAATAATAGGCA 59.959 38.462 5.42 0.00 0.00 4.75
14 15 6.453092 TCGGTTAACTAGCTGAATAATAGGC 58.547 40.000 5.42 0.00 0.00 3.93
15 16 7.883217 TCTCGGTTAACTAGCTGAATAATAGG 58.117 38.462 5.42 0.00 0.00 2.57
16 17 9.745880 TTTCTCGGTTAACTAGCTGAATAATAG 57.254 33.333 5.42 0.00 0.00 1.73
18 19 9.099454 CTTTTCTCGGTTAACTAGCTGAATAAT 57.901 33.333 5.42 0.00 0.00 1.28
19 20 8.308931 TCTTTTCTCGGTTAACTAGCTGAATAA 58.691 33.333 5.42 0.00 0.00 1.40
20 21 7.833786 TCTTTTCTCGGTTAACTAGCTGAATA 58.166 34.615 5.42 3.97 0.00 1.75
21 22 6.698380 TCTTTTCTCGGTTAACTAGCTGAAT 58.302 36.000 5.42 0.00 0.00 2.57
22 23 6.092955 TCTTTTCTCGGTTAACTAGCTGAA 57.907 37.500 5.42 5.90 0.00 3.02
23 24 5.717078 TCTTTTCTCGGTTAACTAGCTGA 57.283 39.130 5.42 0.59 0.00 4.26
24 25 6.780706 TTTCTTTTCTCGGTTAACTAGCTG 57.219 37.500 5.42 0.00 0.00 4.24
25 26 7.660208 TGATTTTCTTTTCTCGGTTAACTAGCT 59.340 33.333 5.42 0.00 0.00 3.32
26 27 7.803724 TGATTTTCTTTTCTCGGTTAACTAGC 58.196 34.615 5.42 0.00 0.00 3.42
27 28 7.958025 GCTGATTTTCTTTTCTCGGTTAACTAG 59.042 37.037 5.42 4.03 0.00 2.57
28 29 7.660208 AGCTGATTTTCTTTTCTCGGTTAACTA 59.340 33.333 5.42 0.00 0.00 2.24
29 30 6.486993 AGCTGATTTTCTTTTCTCGGTTAACT 59.513 34.615 5.42 0.00 0.00 2.24
30 31 6.669278 AGCTGATTTTCTTTTCTCGGTTAAC 58.331 36.000 0.00 0.00 0.00 2.01
31 32 6.877611 AGCTGATTTTCTTTTCTCGGTTAA 57.122 33.333 0.00 0.00 0.00 2.01
32 33 6.877611 AAGCTGATTTTCTTTTCTCGGTTA 57.122 33.333 0.00 0.00 0.00 2.85
33 34 5.774498 AAGCTGATTTTCTTTTCTCGGTT 57.226 34.783 0.00 0.00 0.00 4.44
34 35 5.106515 GCTAAGCTGATTTTCTTTTCTCGGT 60.107 40.000 0.00 0.00 0.00 4.69
35 36 5.327891 GCTAAGCTGATTTTCTTTTCTCGG 58.672 41.667 0.00 0.00 0.00 4.63
36 37 5.106555 TGGCTAAGCTGATTTTCTTTTCTCG 60.107 40.000 0.00 0.00 0.00 4.04
37 38 6.089476 GTGGCTAAGCTGATTTTCTTTTCTC 58.911 40.000 0.00 0.00 0.00 2.87
38 39 5.047731 GGTGGCTAAGCTGATTTTCTTTTCT 60.048 40.000 0.00 0.00 0.00 2.52
39 40 5.164233 GGTGGCTAAGCTGATTTTCTTTTC 58.836 41.667 0.00 0.00 0.00 2.29
40 41 4.021104 GGGTGGCTAAGCTGATTTTCTTTT 60.021 41.667 0.00 0.00 0.00 2.27
41 42 3.511540 GGGTGGCTAAGCTGATTTTCTTT 59.488 43.478 0.00 0.00 0.00 2.52
42 43 3.092301 GGGTGGCTAAGCTGATTTTCTT 58.908 45.455 0.00 0.00 0.00 2.52
43 44 2.728007 GGGTGGCTAAGCTGATTTTCT 58.272 47.619 0.00 0.00 0.00 2.52
44 45 1.401905 CGGGTGGCTAAGCTGATTTTC 59.598 52.381 0.00 0.00 34.33 2.29
45 46 1.271926 ACGGGTGGCTAAGCTGATTTT 60.272 47.619 5.20 0.00 36.45 1.82
46 47 0.328258 ACGGGTGGCTAAGCTGATTT 59.672 50.000 5.20 0.00 36.45 2.17
47 48 0.107654 GACGGGTGGCTAAGCTGATT 60.108 55.000 5.20 0.00 36.45 2.57
48 49 1.264749 TGACGGGTGGCTAAGCTGAT 61.265 55.000 5.20 0.00 36.45 2.90
49 50 1.911269 TGACGGGTGGCTAAGCTGA 60.911 57.895 5.20 0.00 36.45 4.26
50 51 1.741770 GTGACGGGTGGCTAAGCTG 60.742 63.158 0.00 0.00 38.70 4.24
51 52 2.663196 GTGACGGGTGGCTAAGCT 59.337 61.111 0.00 0.00 0.00 3.74
52 53 2.436115 GGTGACGGGTGGCTAAGC 60.436 66.667 0.00 0.00 0.00 3.09
53 54 0.462047 GATGGTGACGGGTGGCTAAG 60.462 60.000 0.00 0.00 0.00 2.18
54 55 1.600107 GATGGTGACGGGTGGCTAA 59.400 57.895 0.00 0.00 0.00 3.09
55 56 2.717044 CGATGGTGACGGGTGGCTA 61.717 63.158 0.00 0.00 0.00 3.93
56 57 4.082523 CGATGGTGACGGGTGGCT 62.083 66.667 0.00 0.00 0.00 4.75
57 58 4.077184 TCGATGGTGACGGGTGGC 62.077 66.667 0.00 0.00 0.00 5.01
58 59 2.125673 GTCGATGGTGACGGGTGG 60.126 66.667 0.00 0.00 0.00 4.61
59 60 2.125673 GGTCGATGGTGACGGGTG 60.126 66.667 0.00 0.00 39.83 4.61
60 61 2.283676 AGGTCGATGGTGACGGGT 60.284 61.111 0.00 0.00 39.83 5.28
61 62 2.494918 GAGGTCGATGGTGACGGG 59.505 66.667 0.00 0.00 39.83 5.28
62 63 2.494918 GGAGGTCGATGGTGACGG 59.505 66.667 0.00 0.00 39.83 4.79
63 64 2.348104 TGGGAGGTCGATGGTGACG 61.348 63.158 0.00 0.00 39.83 4.35
64 65 1.218316 GTGGGAGGTCGATGGTGAC 59.782 63.158 0.00 0.00 38.17 3.67
65 66 1.987855 GGTGGGAGGTCGATGGTGA 60.988 63.158 0.00 0.00 0.00 4.02
66 67 1.961180 GAGGTGGGAGGTCGATGGTG 61.961 65.000 0.00 0.00 0.00 4.17
67 68 1.686110 GAGGTGGGAGGTCGATGGT 60.686 63.158 0.00 0.00 0.00 3.55
68 69 1.381872 AGAGGTGGGAGGTCGATGG 60.382 63.158 0.00 0.00 0.00 3.51
69 70 0.396417 AGAGAGGTGGGAGGTCGATG 60.396 60.000 0.00 0.00 0.00 3.84
70 71 0.106419 GAGAGAGGTGGGAGGTCGAT 60.106 60.000 0.00 0.00 0.00 3.59
71 72 1.303615 GAGAGAGGTGGGAGGTCGA 59.696 63.158 0.00 0.00 0.00 4.20
72 73 1.755008 GGAGAGAGGTGGGAGGTCG 60.755 68.421 0.00 0.00 0.00 4.79
73 74 1.755008 CGGAGAGAGGTGGGAGGTC 60.755 68.421 0.00 0.00 0.00 3.85
74 75 2.360980 CGGAGAGAGGTGGGAGGT 59.639 66.667 0.00 0.00 0.00 3.85
75 76 1.755008 GACGGAGAGAGGTGGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
76 77 2.115911 CGACGGAGAGAGGTGGGAG 61.116 68.421 0.00 0.00 0.00 4.30
77 78 2.045242 CGACGGAGAGAGGTGGGA 60.045 66.667 0.00 0.00 0.00 4.37
78 79 3.827898 GCGACGGAGAGAGGTGGG 61.828 72.222 0.00 0.00 0.00 4.61
79 80 3.827898 GGCGACGGAGAGAGGTGG 61.828 72.222 0.00 0.00 0.00 4.61
80 81 2.752238 AGGCGACGGAGAGAGGTG 60.752 66.667 0.00 0.00 0.00 4.00
81 82 2.752238 CAGGCGACGGAGAGAGGT 60.752 66.667 0.00 0.00 0.00 3.85
82 83 4.200283 GCAGGCGACGGAGAGAGG 62.200 72.222 0.00 0.00 0.00 3.69
83 84 4.200283 GGCAGGCGACGGAGAGAG 62.200 72.222 0.00 0.00 0.00 3.20
84 85 4.742649 AGGCAGGCGACGGAGAGA 62.743 66.667 0.00 0.00 0.00 3.10
85 86 4.200283 GAGGCAGGCGACGGAGAG 62.200 72.222 0.00 0.00 0.00 3.20
86 87 4.742649 AGAGGCAGGCGACGGAGA 62.743 66.667 0.00 0.00 0.00 3.71
87 88 4.504916 CAGAGGCAGGCGACGGAG 62.505 72.222 0.00 0.00 0.00 4.63
98 99 2.320587 CCAACGTGTCTGCAGAGGC 61.321 63.158 18.89 11.93 41.68 4.70
99 100 2.320587 GCCAACGTGTCTGCAGAGG 61.321 63.158 18.89 14.81 0.00 3.69
100 101 2.320587 GGCCAACGTGTCTGCAGAG 61.321 63.158 18.89 8.41 0.00 3.35
101 102 2.280797 GGCCAACGTGTCTGCAGA 60.281 61.111 13.74 13.74 0.00 4.26
102 103 2.591429 TGGCCAACGTGTCTGCAG 60.591 61.111 0.61 7.63 0.00 4.41
103 104 2.899838 GTGGCCAACGTGTCTGCA 60.900 61.111 7.24 0.00 0.00 4.41
104 105 3.660111 GGTGGCCAACGTGTCTGC 61.660 66.667 7.24 0.00 0.00 4.26
105 106 2.203139 TGGTGGCCAACGTGTCTG 60.203 61.111 17.89 0.00 0.00 3.51
106 107 2.203153 GTGGTGGCCAACGTGTCT 60.203 61.111 17.89 0.00 34.18 3.41
107 108 3.284449 GGTGGTGGCCAACGTGTC 61.284 66.667 17.89 6.42 34.18 3.67
108 109 4.887190 GGGTGGTGGCCAACGTGT 62.887 66.667 17.89 0.00 43.24 4.49
125 126 3.419759 GTAGCAACACCGGCCACG 61.420 66.667 0.00 0.00 40.55 4.94
126 127 3.053896 GGTAGCAACACCGGCCAC 61.054 66.667 0.00 0.00 0.00 5.01
127 128 2.824880 AAGGTAGCAACACCGGCCA 61.825 57.895 0.00 0.00 43.84 5.36
128 129 2.033602 AAGGTAGCAACACCGGCC 59.966 61.111 0.00 0.00 43.84 6.13
129 130 2.978018 GCAAGGTAGCAACACCGGC 61.978 63.158 0.00 6.26 43.84 6.13
130 131 1.599518 TGCAAGGTAGCAACACCGG 60.600 57.895 0.00 0.00 43.84 5.28
131 132 4.057224 TGCAAGGTAGCAACACCG 57.943 55.556 0.00 0.00 43.84 4.94
137 138 1.752198 ACGGAAGTGCAAGGTAGCA 59.248 52.632 0.00 0.00 46.97 3.49
138 139 4.695560 ACGGAAGTGCAAGGTAGC 57.304 55.556 0.00 0.00 46.97 3.58
154 155 1.011968 TGTGTCGGCTCGTGCAATAC 61.012 55.000 12.07 7.74 41.91 1.89
155 156 0.108377 ATGTGTCGGCTCGTGCAATA 60.108 50.000 12.07 0.00 41.91 1.90
156 157 1.361668 GATGTGTCGGCTCGTGCAAT 61.362 55.000 12.07 0.00 41.91 3.56
157 158 2.027073 GATGTGTCGGCTCGTGCAA 61.027 57.895 12.07 0.00 41.91 4.08
158 159 2.432456 GATGTGTCGGCTCGTGCA 60.432 61.111 12.07 0.00 41.91 4.57
159 160 1.687494 GAAGATGTGTCGGCTCGTGC 61.687 60.000 0.00 0.00 38.76 5.34
160 161 0.388520 TGAAGATGTGTCGGCTCGTG 60.389 55.000 0.00 0.00 0.00 4.35
161 162 0.317160 TTGAAGATGTGTCGGCTCGT 59.683 50.000 0.00 0.00 0.00 4.18
162 163 0.716108 GTTGAAGATGTGTCGGCTCG 59.284 55.000 0.00 0.00 0.00 5.03
163 164 1.079503 GGTTGAAGATGTGTCGGCTC 58.920 55.000 0.00 0.00 0.00 4.70
164 165 0.396435 TGGTTGAAGATGTGTCGGCT 59.604 50.000 0.00 0.00 0.00 5.52
165 166 1.398390 GATGGTTGAAGATGTGTCGGC 59.602 52.381 0.00 0.00 0.00 5.54
166 167 2.009774 GGATGGTTGAAGATGTGTCGG 58.990 52.381 0.00 0.00 0.00 4.79
167 168 2.009774 GGGATGGTTGAAGATGTGTCG 58.990 52.381 0.00 0.00 0.00 4.35
168 169 3.054802 AGAGGGATGGTTGAAGATGTGTC 60.055 47.826 0.00 0.00 0.00 3.67
169 170 2.915604 AGAGGGATGGTTGAAGATGTGT 59.084 45.455 0.00 0.00 0.00 3.72
170 171 3.641434 AGAGGGATGGTTGAAGATGTG 57.359 47.619 0.00 0.00 0.00 3.21
171 172 3.456277 GGTAGAGGGATGGTTGAAGATGT 59.544 47.826 0.00 0.00 0.00 3.06
172 173 3.181450 GGGTAGAGGGATGGTTGAAGATG 60.181 52.174 0.00 0.00 0.00 2.90
173 174 3.049344 GGGTAGAGGGATGGTTGAAGAT 58.951 50.000 0.00 0.00 0.00 2.40
174 175 2.045885 AGGGTAGAGGGATGGTTGAAGA 59.954 50.000 0.00 0.00 0.00 2.87
175 176 2.436173 GAGGGTAGAGGGATGGTTGAAG 59.564 54.545 0.00 0.00 0.00 3.02
176 177 2.045885 AGAGGGTAGAGGGATGGTTGAA 59.954 50.000 0.00 0.00 0.00 2.69
177 178 1.651770 AGAGGGTAGAGGGATGGTTGA 59.348 52.381 0.00 0.00 0.00 3.18
178 179 2.043227 GAGAGGGTAGAGGGATGGTTG 58.957 57.143 0.00 0.00 0.00 3.77
179 180 1.062044 GGAGAGGGTAGAGGGATGGTT 60.062 57.143 0.00 0.00 0.00 3.67
180 181 0.563672 GGAGAGGGTAGAGGGATGGT 59.436 60.000 0.00 0.00 0.00 3.55
181 182 0.178918 GGGAGAGGGTAGAGGGATGG 60.179 65.000 0.00 0.00 0.00 3.51
182 183 0.863956 AGGGAGAGGGTAGAGGGATG 59.136 60.000 0.00 0.00 0.00 3.51
183 184 1.163408 GAGGGAGAGGGTAGAGGGAT 58.837 60.000 0.00 0.00 0.00 3.85
184 185 1.000041 GGAGGGAGAGGGTAGAGGGA 61.000 65.000 0.00 0.00 0.00 4.20
185 186 1.002242 AGGAGGGAGAGGGTAGAGGG 61.002 65.000 0.00 0.00 0.00 4.30
186 187 0.481128 GAGGAGGGAGAGGGTAGAGG 59.519 65.000 0.00 0.00 0.00 3.69
187 188 1.529744 AGAGGAGGGAGAGGGTAGAG 58.470 60.000 0.00 0.00 0.00 2.43
188 189 2.003247 AAGAGGAGGGAGAGGGTAGA 57.997 55.000 0.00 0.00 0.00 2.59
189 190 2.858787 AAAGAGGAGGGAGAGGGTAG 57.141 55.000 0.00 0.00 0.00 3.18
190 191 3.181399 TCAAAAAGAGGAGGGAGAGGGTA 60.181 47.826 0.00 0.00 0.00 3.69
191 192 1.988846 CAAAAAGAGGAGGGAGAGGGT 59.011 52.381 0.00 0.00 0.00 4.34
192 193 2.026729 GTCAAAAAGAGGAGGGAGAGGG 60.027 54.545 0.00 0.00 0.00 4.30
193 194 2.639839 TGTCAAAAAGAGGAGGGAGAGG 59.360 50.000 0.00 0.00 0.00 3.69
194 195 3.558109 GGTGTCAAAAAGAGGAGGGAGAG 60.558 52.174 0.00 0.00 0.00 3.20
195 196 2.372172 GGTGTCAAAAAGAGGAGGGAGA 59.628 50.000 0.00 0.00 0.00 3.71
196 197 2.784347 GGTGTCAAAAAGAGGAGGGAG 58.216 52.381 0.00 0.00 0.00 4.30
197 198 1.071699 CGGTGTCAAAAAGAGGAGGGA 59.928 52.381 0.00 0.00 0.00 4.20
198 199 1.523758 CGGTGTCAAAAAGAGGAGGG 58.476 55.000 0.00 0.00 0.00 4.30
199 200 1.523758 CCGGTGTCAAAAAGAGGAGG 58.476 55.000 0.00 0.00 0.00 4.30
200 201 0.875059 GCCGGTGTCAAAAAGAGGAG 59.125 55.000 1.90 0.00 0.00 3.69
201 202 0.181587 TGCCGGTGTCAAAAAGAGGA 59.818 50.000 1.90 0.00 0.00 3.71
202 203 1.028905 TTGCCGGTGTCAAAAAGAGG 58.971 50.000 1.90 0.00 0.00 3.69
203 204 1.269051 GGTTGCCGGTGTCAAAAAGAG 60.269 52.381 1.90 0.00 0.00 2.85
204 205 0.741915 GGTTGCCGGTGTCAAAAAGA 59.258 50.000 1.90 0.00 0.00 2.52
205 206 0.249280 GGGTTGCCGGTGTCAAAAAG 60.249 55.000 1.90 0.00 0.00 2.27
206 207 1.677637 GGGGTTGCCGGTGTCAAAAA 61.678 55.000 1.90 0.00 0.00 1.94
207 208 2.128507 GGGGTTGCCGGTGTCAAAA 61.129 57.895 1.90 0.00 0.00 2.44
208 209 2.519780 GGGGTTGCCGGTGTCAAA 60.520 61.111 1.90 0.00 0.00 2.69
209 210 3.485346 GAGGGGTTGCCGGTGTCAA 62.485 63.158 1.90 0.00 0.00 3.18
210 211 3.948719 GAGGGGTTGCCGGTGTCA 61.949 66.667 1.90 0.00 0.00 3.58
211 212 3.948719 TGAGGGGTTGCCGGTGTC 61.949 66.667 1.90 0.00 0.00 3.67
212 213 4.265056 GTGAGGGGTTGCCGGTGT 62.265 66.667 1.90 0.00 0.00 4.16
213 214 2.119484 TAAGTGAGGGGTTGCCGGTG 62.119 60.000 1.90 0.00 0.00 4.94
214 215 1.205460 ATAAGTGAGGGGTTGCCGGT 61.205 55.000 1.90 0.00 0.00 5.28
215 216 0.748005 CATAAGTGAGGGGTTGCCGG 60.748 60.000 0.00 0.00 0.00 6.13
216 217 0.251916 TCATAAGTGAGGGGTTGCCG 59.748 55.000 0.00 0.00 0.00 5.69
217 218 1.004277 TGTCATAAGTGAGGGGTTGCC 59.996 52.381 0.00 0.00 34.36 4.52
218 219 2.084546 GTGTCATAAGTGAGGGGTTGC 58.915 52.381 0.00 0.00 34.36 4.17
219 220 3.703001 AGTGTCATAAGTGAGGGGTTG 57.297 47.619 0.00 0.00 34.36 3.77
220 221 3.810743 GCAAGTGTCATAAGTGAGGGGTT 60.811 47.826 0.00 0.00 34.36 4.11
221 222 2.290323 GCAAGTGTCATAAGTGAGGGGT 60.290 50.000 0.00 0.00 34.36 4.95
222 223 2.026822 AGCAAGTGTCATAAGTGAGGGG 60.027 50.000 0.00 0.00 34.36 4.79
223 224 3.005554 CAGCAAGTGTCATAAGTGAGGG 58.994 50.000 0.00 0.00 34.36 4.30
224 225 3.005554 CCAGCAAGTGTCATAAGTGAGG 58.994 50.000 0.00 0.00 34.36 3.86
225 226 3.668447 ACCAGCAAGTGTCATAAGTGAG 58.332 45.455 0.00 0.00 34.36 3.51
226 227 3.557054 GGACCAGCAAGTGTCATAAGTGA 60.557 47.826 0.00 0.00 33.09 3.41
227 228 2.744202 GGACCAGCAAGTGTCATAAGTG 59.256 50.000 0.00 0.00 33.09 3.16
228 229 2.290323 GGGACCAGCAAGTGTCATAAGT 60.290 50.000 0.00 0.00 33.09 2.24
229 230 2.359900 GGGACCAGCAAGTGTCATAAG 58.640 52.381 0.00 0.00 33.09 1.73
230 231 1.338674 CGGGACCAGCAAGTGTCATAA 60.339 52.381 0.00 0.00 33.09 1.90
231 232 0.249120 CGGGACCAGCAAGTGTCATA 59.751 55.000 0.00 0.00 33.09 2.15
232 233 1.003355 CGGGACCAGCAAGTGTCAT 60.003 57.895 0.00 0.00 33.09 3.06
233 234 2.425592 CGGGACCAGCAAGTGTCA 59.574 61.111 0.00 0.00 33.09 3.58
234 235 3.050275 GCGGGACCAGCAAGTGTC 61.050 66.667 12.14 0.00 34.19 3.67
235 236 3.537206 GAGCGGGACCAGCAAGTGT 62.537 63.158 19.24 0.00 37.01 3.55
236 237 2.743928 GAGCGGGACCAGCAAGTG 60.744 66.667 19.24 0.00 37.01 3.16
237 238 4.021925 GGAGCGGGACCAGCAAGT 62.022 66.667 19.24 0.00 37.01 3.16
238 239 3.672295 GAGGAGCGGGACCAGCAAG 62.672 68.421 19.24 0.00 37.01 4.01
239 240 3.706373 GAGGAGCGGGACCAGCAA 61.706 66.667 19.24 0.00 37.01 3.91
240 241 4.704103 AGAGGAGCGGGACCAGCA 62.704 66.667 19.24 0.00 37.01 4.41
241 242 3.378399 GAAGAGGAGCGGGACCAGC 62.378 68.421 8.78 8.78 0.00 4.85
242 243 0.395862 TAGAAGAGGAGCGGGACCAG 60.396 60.000 0.00 0.00 0.00 4.00
243 244 0.683504 GTAGAAGAGGAGCGGGACCA 60.684 60.000 0.00 0.00 0.00 4.02
244 245 1.726533 CGTAGAAGAGGAGCGGGACC 61.727 65.000 0.00 0.00 0.00 4.46
245 246 1.726533 CCGTAGAAGAGGAGCGGGAC 61.727 65.000 0.00 0.00 38.86 4.46
246 247 1.453379 CCGTAGAAGAGGAGCGGGA 60.453 63.158 0.00 0.00 38.86 5.14
247 248 1.321074 AACCGTAGAAGAGGAGCGGG 61.321 60.000 6.25 0.00 45.85 6.13
248 249 1.065251 GTAACCGTAGAAGAGGAGCGG 59.935 57.143 0.00 0.00 46.83 5.52
249 250 2.015587 AGTAACCGTAGAAGAGGAGCG 58.984 52.381 0.00 0.00 0.00 5.03
250 251 2.479901 GCAGTAACCGTAGAAGAGGAGC 60.480 54.545 0.00 0.00 0.00 4.70
251 252 2.223294 CGCAGTAACCGTAGAAGAGGAG 60.223 54.545 0.00 0.00 0.00 3.69
252 253 1.741706 CGCAGTAACCGTAGAAGAGGA 59.258 52.381 0.00 0.00 0.00 3.71
253 254 1.798079 GCGCAGTAACCGTAGAAGAGG 60.798 57.143 0.30 0.00 0.00 3.69
254 255 1.546834 GCGCAGTAACCGTAGAAGAG 58.453 55.000 0.30 0.00 0.00 2.85
255 256 0.179181 CGCGCAGTAACCGTAGAAGA 60.179 55.000 8.75 0.00 0.00 2.87
256 257 1.138047 CCGCGCAGTAACCGTAGAAG 61.138 60.000 8.75 0.00 0.00 2.85
257 258 1.153978 CCGCGCAGTAACCGTAGAA 60.154 57.895 8.75 0.00 0.00 2.10
258 259 2.486504 CCGCGCAGTAACCGTAGA 59.513 61.111 8.75 0.00 0.00 2.59
259 260 3.252484 GCCGCGCAGTAACCGTAG 61.252 66.667 8.75 0.00 0.00 3.51
260 261 4.799824 GGCCGCGCAGTAACCGTA 62.800 66.667 8.75 0.00 0.00 4.02
263 264 4.097863 GTTGGCCGCGCAGTAACC 62.098 66.667 8.75 0.65 0.00 2.85
264 265 4.097863 GGTTGGCCGCGCAGTAAC 62.098 66.667 8.75 6.74 0.00 2.50
265 266 3.910914 ATGGTTGGCCGCGCAGTAA 62.911 57.895 8.75 0.00 37.67 2.24
266 267 4.402528 ATGGTTGGCCGCGCAGTA 62.403 61.111 8.75 0.00 37.67 2.74
271 272 3.112126 GATGTCATGGTTGGCCGCG 62.112 63.158 0.00 0.00 37.67 6.46
272 273 2.800736 GATGTCATGGTTGGCCGC 59.199 61.111 0.00 0.00 37.67 6.53
273 274 3.101209 CGATGTCATGGTTGGCCG 58.899 61.111 0.00 0.00 37.67 6.13
285 286 1.067084 CGAGCCAGAGATGCGATGT 59.933 57.895 0.00 0.00 0.00 3.06
287 288 1.680522 AACCGAGCCAGAGATGCGAT 61.681 55.000 0.00 0.00 0.00 4.58
288 289 2.284798 GAACCGAGCCAGAGATGCGA 62.285 60.000 0.00 0.00 0.00 5.10
290 291 1.522580 GGAACCGAGCCAGAGATGC 60.523 63.158 0.00 0.00 0.00 3.91
292 293 1.134280 CATTGGAACCGAGCCAGAGAT 60.134 52.381 0.00 0.00 36.64 2.75
297 298 1.375396 CGACATTGGAACCGAGCCA 60.375 57.895 0.00 0.00 0.00 4.75
320 321 1.204792 CCAAAACCTTTGGCGTTTCG 58.795 50.000 5.27 0.00 32.33 3.46
333 334 1.611491 TGATCTTCGGTTGGCCAAAAC 59.389 47.619 22.47 15.49 34.09 2.43
336 337 1.004161 TGATGATCTTCGGTTGGCCAA 59.996 47.619 16.05 16.05 34.09 4.52
350 352 4.020307 GGGGGAAAACATGTGTTTGATGAT 60.020 41.667 11.50 0.00 46.47 2.45
370 372 4.019321 TGTTTGTCAGAGAGAATAAGGGGG 60.019 45.833 0.00 0.00 0.00 5.40
371 373 5.046304 TCTGTTTGTCAGAGAGAATAAGGGG 60.046 44.000 0.00 0.00 46.77 4.79
372 374 6.042638 TCTGTTTGTCAGAGAGAATAAGGG 57.957 41.667 0.00 0.00 46.77 3.95
384 386 4.556942 TTCTGTGCAATCTGTTTGTCAG 57.443 40.909 13.89 13.89 44.85 3.51
394 396 4.808558 TGCTGGTATTTTTCTGTGCAATC 58.191 39.130 0.00 0.00 0.00 2.67
396 398 4.662468 TTGCTGGTATTTTTCTGTGCAA 57.338 36.364 0.00 0.00 36.93 4.08
414 416 5.569059 CGTGTTGAGAGGTAAAATGAATTGC 59.431 40.000 0.00 0.00 0.00 3.56
415 417 6.797033 GTCGTGTTGAGAGGTAAAATGAATTG 59.203 38.462 0.00 0.00 0.00 2.32
417 419 6.231211 AGTCGTGTTGAGAGGTAAAATGAAT 58.769 36.000 0.00 0.00 0.00 2.57
435 437 2.032030 GTCCATCCACAACAAAGTCGTG 60.032 50.000 0.00 0.00 0.00 4.35
446 448 0.179004 AAAACGCTGGTCCATCCACA 60.179 50.000 0.00 0.00 41.93 4.17
455 457 3.880490 TGAGAACAACATAAAACGCTGGT 59.120 39.130 0.00 0.00 0.00 4.00
457 459 4.379793 GCTTGAGAACAACATAAAACGCTG 59.620 41.667 0.00 0.00 32.27 5.18
458 460 4.537015 GCTTGAGAACAACATAAAACGCT 58.463 39.130 0.00 0.00 32.27 5.07
459 461 3.357823 CGCTTGAGAACAACATAAAACGC 59.642 43.478 0.00 0.00 32.27 4.84
460 462 3.357823 GCGCTTGAGAACAACATAAAACG 59.642 43.478 0.00 0.00 32.27 3.60
461 463 3.357823 CGCGCTTGAGAACAACATAAAAC 59.642 43.478 5.56 0.00 32.27 2.43
464 466 2.096466 CACGCGCTTGAGAACAACATAA 60.096 45.455 8.42 0.00 32.27 1.90
465 467 1.459209 CACGCGCTTGAGAACAACATA 59.541 47.619 8.42 0.00 32.27 2.29
466 468 0.235665 CACGCGCTTGAGAACAACAT 59.764 50.000 8.42 0.00 32.27 2.71
478 480 3.649986 GGCAACAACTCACGCGCT 61.650 61.111 5.73 0.00 0.00 5.92
494 496 0.466189 ATTAGGATGCACAAGGCCGG 60.466 55.000 0.00 0.00 43.89 6.13
501 503 5.335583 GCGCCATAAATAATTAGGATGCACA 60.336 40.000 0.00 0.00 0.00 4.57
512 514 3.820557 ACACCTCAGCGCCATAAATAAT 58.179 40.909 2.29 0.00 0.00 1.28
513 515 3.275617 ACACCTCAGCGCCATAAATAA 57.724 42.857 2.29 0.00 0.00 1.40
532 534 8.893727 ACTTAAAATGTAGCATCAAGTGGATAC 58.106 33.333 0.00 0.00 33.95 2.24
631 635 8.857098 GGAATACTTTTCTCCTTGTACCTTTTT 58.143 33.333 0.00 0.00 0.00 1.94
632 636 8.225416 AGGAATACTTTTCTCCTTGTACCTTTT 58.775 33.333 0.00 0.00 36.06 2.27
658 662 6.657541 GGGTTGATTGAAAGATACAGTACCAA 59.342 38.462 0.00 0.00 0.00 3.67
749 753 1.068885 CGCTCTCGTCTGTCTTTGTCT 60.069 52.381 0.00 0.00 0.00 3.41
784 790 3.050835 GGAGTAGGAGAGAGTAGGGAGT 58.949 54.545 0.00 0.00 0.00 3.85
930 1325 2.047179 GACGCGGCCTTTCTCCTT 60.047 61.111 12.47 0.00 0.00 3.36
945 1340 1.228459 AAAGGTGGCCGGGAAAGAC 60.228 57.895 2.18 0.00 0.00 3.01
1041 1438 3.746949 CTGGAGGATGGCGAGCACC 62.747 68.421 0.00 0.00 0.00 5.01
1163 1560 4.162690 AGGAATGGAGACGGCGGC 62.163 66.667 13.24 8.92 0.00 6.53
1178 1589 1.729470 CCCGACTCACAGATCCGAGG 61.729 65.000 8.72 0.00 33.36 4.63
1206 1627 0.036010 AGCACCAAATCAGGTCGGAG 60.036 55.000 0.00 0.00 40.77 4.63
1316 1739 1.250840 ATGGAAACCGCAGAAAGGGC 61.251 55.000 0.00 0.00 0.00 5.19
1448 1885 0.320771 CAGAACTGGTGAAGGGGACG 60.321 60.000 0.00 0.00 0.00 4.79
1459 1896 1.517242 GAAGTGGTGAGCAGAACTGG 58.483 55.000 3.99 0.00 0.00 4.00
1462 1899 1.230324 GTGGAAGTGGTGAGCAGAAC 58.770 55.000 0.00 0.00 0.00 3.01
1466 1903 2.075566 TGGGTGGAAGTGGTGAGCA 61.076 57.895 0.00 0.00 0.00 4.26
1479 1916 1.281419 TACATACAGGTGGGTGGGTG 58.719 55.000 0.00 0.00 0.00 4.61
1480 1917 2.047769 TTACATACAGGTGGGTGGGT 57.952 50.000 0.00 0.00 0.00 4.51
1482 1919 2.777692 AGGATTACATACAGGTGGGTGG 59.222 50.000 0.00 0.00 0.00 4.61
1485 1922 5.888982 ACTAAGGATTACATACAGGTGGG 57.111 43.478 0.00 0.00 0.00 4.61
1509 1946 5.407387 ACAGGTGCAAAACATTACTACTACG 59.593 40.000 0.00 0.00 0.00 3.51
1554 1997 4.286967 CGAGGATACGACGCTGTG 57.713 61.111 0.00 0.00 46.39 3.66
1565 2008 2.180204 CCATTTTCGCGGCGAGGAT 61.180 57.895 25.02 18.87 37.14 3.24
1567 2010 1.714899 ATTCCATTTTCGCGGCGAGG 61.715 55.000 25.02 21.65 37.14 4.63
1593 2036 5.334105 CCAAATGAATCGTATCATTCGGGAC 60.334 44.000 19.60 0.00 46.57 4.46
1595 2038 5.034554 CCAAATGAATCGTATCATTCGGG 57.965 43.478 15.33 15.23 46.57 5.14
1596 2039 4.613622 GCCCAAATGAATCGTATCATTCGG 60.614 45.833 15.33 14.05 46.57 4.30
1597 2040 4.214119 AGCCCAAATGAATCGTATCATTCG 59.786 41.667 15.33 7.55 46.57 3.34
1598 2041 5.455392 CAGCCCAAATGAATCGTATCATTC 58.545 41.667 15.33 3.84 46.57 2.67
1601 2044 2.618241 GCAGCCCAAATGAATCGTATCA 59.382 45.455 0.00 0.00 0.00 2.15
1602 2045 2.618241 TGCAGCCCAAATGAATCGTATC 59.382 45.455 0.00 0.00 0.00 2.24
1603 2046 2.653726 TGCAGCCCAAATGAATCGTAT 58.346 42.857 0.00 0.00 0.00 3.06
1604 2047 2.121291 TGCAGCCCAAATGAATCGTA 57.879 45.000 0.00 0.00 0.00 3.43
1605 2048 1.477553 ATGCAGCCCAAATGAATCGT 58.522 45.000 0.00 0.00 0.00 3.73
1606 2049 3.713858 TTATGCAGCCCAAATGAATCG 57.286 42.857 0.00 0.00 0.00 3.34
1607 2050 4.122046 GGTTTATGCAGCCCAAATGAATC 58.878 43.478 0.00 0.00 0.00 2.52
1608 2051 3.518705 TGGTTTATGCAGCCCAAATGAAT 59.481 39.130 0.00 0.00 0.00 2.57
1609 2052 2.902486 TGGTTTATGCAGCCCAAATGAA 59.098 40.909 0.00 0.00 0.00 2.57
1610 2053 2.533916 TGGTTTATGCAGCCCAAATGA 58.466 42.857 0.00 0.00 0.00 2.57
1611 2054 3.547054 ATGGTTTATGCAGCCCAAATG 57.453 42.857 0.00 0.00 0.00 2.32
1612 2055 4.040706 CCATATGGTTTATGCAGCCCAAAT 59.959 41.667 14.09 0.00 0.00 2.32
1613 2056 3.387374 CCATATGGTTTATGCAGCCCAAA 59.613 43.478 14.09 0.00 0.00 3.28
1614 2057 2.964464 CCATATGGTTTATGCAGCCCAA 59.036 45.455 14.09 0.00 0.00 4.12
1615 2058 2.596346 CCATATGGTTTATGCAGCCCA 58.404 47.619 14.09 0.00 0.00 5.36
1616 2059 1.273327 GCCATATGGTTTATGCAGCCC 59.727 52.381 22.79 0.00 37.57 5.19
1617 2060 1.962807 TGCCATATGGTTTATGCAGCC 59.037 47.619 22.79 2.88 37.57 4.85
1652 2095 0.035056 ACATTGCTCTCCGGAAAGGG 60.035 55.000 6.97 0.00 41.52 3.95
1659 2102 3.044986 CAAACAAACACATTGCTCTCCG 58.955 45.455 0.00 0.00 43.13 4.63
1703 2146 6.594788 ATCCAGCTTCTGCAGAAATAAAAA 57.405 33.333 28.16 13.62 42.74 1.94
1708 2151 4.084287 TGAAATCCAGCTTCTGCAGAAAT 58.916 39.130 28.16 17.69 42.74 2.17
1709 2152 3.489355 TGAAATCCAGCTTCTGCAGAAA 58.511 40.909 28.16 14.81 42.74 2.52
1771 2214 1.444250 GACGTATGCCCCGATGGAA 59.556 57.895 0.00 0.00 35.39 3.53
1774 2217 3.036084 GCGACGTATGCCCCGATG 61.036 66.667 0.90 0.00 0.00 3.84
1977 2420 3.594134 GCAGTAAGAGCACAGAATGACT 58.406 45.455 0.00 0.00 39.69 3.41
2068 2512 3.684788 AGAATAACTGCATCACACGGAAC 59.315 43.478 0.00 0.00 0.00 3.62
2118 2562 3.349006 GCCCATATGCGCCACTCG 61.349 66.667 4.18 0.00 42.12 4.18
2169 2613 2.614987 GCTGAGCTCTGTCATTGAGGTT 60.615 50.000 20.24 0.00 41.58 3.50
2426 2871 5.220815 CCGGTAGCACTACAGTAAGAACTAG 60.221 48.000 9.87 0.00 37.78 2.57
2480 2925 9.995003 AGAGAATACTTGATAAATCATCTGACC 57.005 33.333 0.00 0.00 36.56 4.02
2616 3061 2.154007 CGAAGAAAAGACAGAGTCGTGC 59.846 50.000 0.00 0.00 37.67 5.34
2718 3163 1.955778 CCAGCAACATTGAAGGTCACA 59.044 47.619 0.00 0.00 0.00 3.58
2778 3223 2.057922 AGAGGAGAAGCTTGTGGGAAA 58.942 47.619 2.10 0.00 0.00 3.13
2784 3229 2.439507 TGGAAACAGAGGAGAAGCTTGT 59.560 45.455 2.10 0.00 35.01 3.16
2789 3234 3.812053 CAGTTGTGGAAACAGAGGAGAAG 59.188 47.826 0.00 0.00 44.46 2.85
2804 3249 4.214119 CCTACAGTGGAATGTTCAGTTGTG 59.786 45.833 0.00 0.00 34.56 3.33
2806 3251 4.389374 ACCTACAGTGGAATGTTCAGTTG 58.611 43.478 0.00 0.00 34.56 3.16
2835 3281 3.403057 CACGAGACCAACACGGCG 61.403 66.667 4.80 4.80 39.03 6.46
2838 3284 0.528901 TCAACCACGAGACCAACACG 60.529 55.000 0.00 0.00 38.45 4.49
2841 3287 2.457366 AGATCAACCACGAGACCAAC 57.543 50.000 0.00 0.00 0.00 3.77
2850 3296 1.450025 GGTTCCGGAAGATCAACCAC 58.550 55.000 19.50 2.37 38.57 4.16
2854 3300 2.576191 AGATTGGGTTCCGGAAGATCAA 59.424 45.455 19.50 20.74 0.00 2.57
2871 3317 2.852714 TTGCATTCATGGGGGAGATT 57.147 45.000 0.00 0.00 0.00 2.40
2880 3326 1.525197 GCGCATCCAATTGCATTCATG 59.475 47.619 0.30 0.00 42.91 3.07
2970 3416 3.493303 CCTTGGCTCCCTAGGGGC 61.493 72.222 28.19 26.55 43.94 5.80
2972 3418 1.915983 GTTCCTTGGCTCCCTAGGG 59.084 63.158 23.22 23.22 44.61 3.53
3060 3506 4.692625 CGGCTCTTGAATATGGGAGTATTG 59.307 45.833 0.00 0.00 0.00 1.90
3173 3619 8.615878 AGTACAACATAATGTAGCTTCACAAA 57.384 30.769 0.00 0.00 36.51 2.83
3184 3630 3.620427 TGCCCGAGTACAACATAATGT 57.380 42.857 0.00 0.00 37.32 2.71
3187 3633 3.749088 CAGTTTGCCCGAGTACAACATAA 59.251 43.478 0.00 0.00 0.00 1.90
3200 3646 2.200337 AAACCCTCGCAGTTTGCCC 61.200 57.895 0.00 0.00 41.12 5.36
3210 3656 4.879598 ACTAGTAACTGAACAAACCCTCG 58.120 43.478 0.00 0.00 0.00 4.63
3339 3791 6.818142 GCCATTAATTTTCATACCAGCAGTTT 59.182 34.615 0.00 0.00 0.00 2.66
3355 3807 8.846943 TGACTCGTATCATAATGCCATTAATT 57.153 30.769 0.47 0.00 0.00 1.40
3359 3811 6.705302 AGATGACTCGTATCATAATGCCATT 58.295 36.000 0.00 0.00 39.48 3.16
3363 3815 6.073602 TGCAAAGATGACTCGTATCATAATGC 60.074 38.462 18.09 18.09 39.48 3.56
3380 3832 4.860907 GCAACAGAATTTCGATGCAAAGAT 59.139 37.500 14.86 0.00 34.10 2.40
3382 3834 3.982701 TGCAACAGAATTTCGATGCAAAG 59.017 39.130 18.13 0.00 40.47 2.77
3399 3851 3.243643 GCAACAGAAAGACAATGTGCAAC 59.756 43.478 0.00 0.00 37.35 4.17
3401 3853 2.426381 TGCAACAGAAAGACAATGTGCA 59.574 40.909 0.00 0.00 32.51 4.57
3404 3856 6.985117 ACAATATGCAACAGAAAGACAATGT 58.015 32.000 0.00 0.00 0.00 2.71
3406 3858 7.392673 AGAGACAATATGCAACAGAAAGACAAT 59.607 33.333 0.00 0.00 0.00 2.71
3407 3859 6.712095 AGAGACAATATGCAACAGAAAGACAA 59.288 34.615 0.00 0.00 0.00 3.18
3408 3860 6.148315 CAGAGACAATATGCAACAGAAAGACA 59.852 38.462 0.00 0.00 0.00 3.41
3409 3861 6.369890 TCAGAGACAATATGCAACAGAAAGAC 59.630 38.462 0.00 0.00 0.00 3.01
3410 3862 6.466812 TCAGAGACAATATGCAACAGAAAGA 58.533 36.000 0.00 0.00 0.00 2.52
3411 3863 6.732531 TCAGAGACAATATGCAACAGAAAG 57.267 37.500 0.00 0.00 0.00 2.62
3412 3864 7.362315 CCAATCAGAGACAATATGCAACAGAAA 60.362 37.037 0.00 0.00 0.00 2.52
3413 3865 6.094464 CCAATCAGAGACAATATGCAACAGAA 59.906 38.462 0.00 0.00 0.00 3.02
3414 3866 5.587443 CCAATCAGAGACAATATGCAACAGA 59.413 40.000 0.00 0.00 0.00 3.41
3415 3867 5.587443 TCCAATCAGAGACAATATGCAACAG 59.413 40.000 0.00 0.00 0.00 3.16
3416 3868 5.499313 TCCAATCAGAGACAATATGCAACA 58.501 37.500 0.00 0.00 0.00 3.33
3417 3869 6.441093 TTCCAATCAGAGACAATATGCAAC 57.559 37.500 0.00 0.00 0.00 4.17
3418 3870 7.465353 TTTTCCAATCAGAGACAATATGCAA 57.535 32.000 0.00 0.00 0.00 4.08
3419 3871 7.465353 TTTTTCCAATCAGAGACAATATGCA 57.535 32.000 0.00 0.00 0.00 3.96
3446 3898 6.657966 GTGGCTTAACCTTTATGTTCCTAGTT 59.342 38.462 0.00 0.00 40.22 2.24
3447 3899 6.012771 AGTGGCTTAACCTTTATGTTCCTAGT 60.013 38.462 0.00 0.00 40.22 2.57
3448 3900 6.415573 AGTGGCTTAACCTTTATGTTCCTAG 58.584 40.000 0.00 0.00 40.22 3.02
3476 3930 9.507280 CTTTACATTCCTGCATAACTAAACATG 57.493 33.333 0.00 0.00 0.00 3.21
3478 3932 8.856153 TCTTTACATTCCTGCATAACTAAACA 57.144 30.769 0.00 0.00 0.00 2.83
3654 4110 5.103387 AGTGTACATAGGAGGGGTGTATGTA 60.103 44.000 0.00 0.00 38.19 2.29
3665 4121 3.251479 TGCAAGCAGTGTACATAGGAG 57.749 47.619 0.00 0.00 0.00 3.69
3701 4158 4.518211 CCATTATGAGTTCATCTTCCAGCC 59.482 45.833 0.00 0.00 37.76 4.85
3722 4180 2.268920 GATGAACTGCCCTCGCCA 59.731 61.111 0.00 0.00 0.00 5.69
3737 4195 3.869832 CGAGACATGCTCAATTCAGTGAT 59.130 43.478 14.69 0.00 44.15 3.06
3744 4202 3.411446 TCAAACCGAGACATGCTCAATT 58.589 40.909 14.69 7.23 44.15 2.32
3747 4205 2.028203 TCATCAAACCGAGACATGCTCA 60.028 45.455 14.69 0.00 44.15 4.26
3753 4211 2.677902 GCCTCATCATCAAACCGAGACA 60.678 50.000 0.00 0.00 0.00 3.41
3755 4213 1.833630 AGCCTCATCATCAAACCGAGA 59.166 47.619 0.00 0.00 0.00 4.04
3761 4219 2.025605 AGCCAGAAGCCTCATCATCAAA 60.026 45.455 0.00 0.00 45.47 2.69
3763 4221 1.134189 CAGCCAGAAGCCTCATCATCA 60.134 52.381 0.00 0.00 45.47 3.07
3766 4224 0.251354 GACAGCCAGAAGCCTCATCA 59.749 55.000 0.00 0.00 45.47 3.07
3768 4226 0.694771 TTGACAGCCAGAAGCCTCAT 59.305 50.000 0.00 0.00 45.47 2.90
3786 4244 5.505654 CGGCAACTGTAACTTGACAAAGATT 60.506 40.000 0.00 0.00 36.84 2.40
3794 4252 0.249531 TCGCGGCAACTGTAACTTGA 60.250 50.000 6.13 0.00 0.00 3.02
3846 4304 0.392863 CAGATGATTGGACCACCGCA 60.393 55.000 0.00 0.00 39.42 5.69
3873 4331 4.019174 AGTTCATGGCCAAGTATTTCCTG 58.981 43.478 10.96 0.00 0.00 3.86
3930 4388 1.460504 AGAATGAGTCGCCGACAGTA 58.539 50.000 20.65 5.28 34.60 2.74
3951 4409 0.827925 AGACTTCTCTCGTGGTGCCA 60.828 55.000 0.00 0.00 0.00 4.92
3969 4427 0.036010 AACTGGAGACATGGGCGAAG 60.036 55.000 0.00 0.00 41.51 3.79
4017 4475 3.684788 AGTTTGTACTTGGCATCATCGAC 59.315 43.478 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.