Multiple sequence alignment - TraesCS2B01G620400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G620400 chr2B 100.000 2558 0 0 1 2558 794908997 794906440 0.000000e+00 4724.0
1 TraesCS2B01G620400 chr2B 77.043 257 50 8 600 850 795280246 795279993 3.430000e-29 139.0
2 TraesCS2B01G620400 chr2B 82.051 78 11 3 1996 2071 777386750 777386826 2.120000e-06 63.9
3 TraesCS2B01G620400 chr2A 92.803 1320 66 14 597 1906 762414690 762415990 0.000000e+00 1884.0
4 TraesCS2B01G620400 chr2A 93.407 1001 39 14 588 1588 762391584 762392557 0.000000e+00 1458.0
5 TraesCS2B01G620400 chr2A 90.129 466 44 2 2094 2558 762493824 762494288 2.820000e-169 604.0
6 TraesCS2B01G620400 chr2A 88.172 372 26 9 187 548 762414175 762414538 6.540000e-116 427.0
7 TraesCS2B01G620400 chr2A 71.444 900 205 44 658 1534 767938207 767939077 9.340000e-45 191.0
8 TraesCS2B01G620400 chr2A 80.000 260 38 8 2113 2371 742074372 742074618 2.020000e-41 180.0
9 TraesCS2B01G620400 chr2A 80.000 260 38 8 2113 2371 742106454 742106700 2.020000e-41 180.0
10 TraesCS2B01G620400 chr2A 77.288 295 51 11 2105 2395 751841568 751841286 2.630000e-35 159.0
11 TraesCS2B01G620400 chr2A 79.562 137 20 4 1959 2090 690726503 690726636 9.750000e-15 91.6
12 TraesCS2B01G620400 chr2A 94.444 54 3 0 10 63 762389632 762389685 1.630000e-12 84.2
13 TraesCS2B01G620400 chr2A 88.710 62 6 1 2015 2076 640812409 640812349 9.820000e-10 75.0
14 TraesCS2B01G620400 chr2D 94.316 1038 28 10 878 1906 637587911 637586896 0.000000e+00 1561.0
15 TraesCS2B01G620400 chr2D 95.578 294 6 2 588 881 637588357 637588071 4.990000e-127 464.0
16 TraesCS2B01G620400 chr2D 86.893 412 33 10 187 590 637588879 637588481 2.340000e-120 442.0
17 TraesCS2B01G620400 chr2D 93.841 276 17 0 2283 2558 637530198 637529923 1.420000e-112 416.0
18 TraesCS2B01G620400 chr2D 87.958 191 15 2 2098 2287 637539618 637539435 4.290000e-53 219.0
19 TraesCS2B01G620400 chr2D 94.406 143 5 1 1902 2041 637586856 637586714 1.540000e-52 217.0
20 TraesCS2B01G620400 chr2D 70.855 947 222 40 613 1534 642984760 642985677 1.220000e-38 171.0
21 TraesCS2B01G620400 chr2D 76.265 257 52 8 600 850 380925386 380925639 7.430000e-26 128.0
22 TraesCS2B01G620400 chr2D 76.265 257 52 8 600 850 381087062 381086809 7.430000e-26 128.0
23 TraesCS2B01G620400 chr2D 80.303 132 18 5 1971 2097 547154440 547154568 2.710000e-15 93.5
24 TraesCS2B01G620400 chr3A 81.495 281 48 3 2113 2392 477149516 477149793 7.120000e-56 228.0
25 TraesCS2B01G620400 chr3A 81.863 204 32 4 2113 2315 750266745 750266944 1.570000e-37 167.0
26 TraesCS2B01G620400 chr1D 80.297 269 38 9 2112 2379 223432676 223432422 3.360000e-44 189.0
27 TraesCS2B01G620400 chr1D 82.051 78 9 2 2017 2090 308448602 308448678 7.640000e-06 62.1
28 TraesCS2B01G620400 chr1A 78.073 301 49 11 2102 2398 74349690 74349403 9.410000e-40 174.0
29 TraesCS2B01G620400 chr7A 78.397 287 46 10 2113 2398 663756593 663756322 3.380000e-39 172.0
30 TraesCS2B01G620400 chr7A 76.978 278 47 9 2113 2387 701166931 701167194 2.650000e-30 143.0
31 TraesCS2B01G620400 chr7A 75.676 185 33 7 1912 2090 201534660 201534838 5.870000e-12 82.4
32 TraesCS2B01G620400 chr5A 77.741 301 53 11 2102 2398 44902412 44902122 3.380000e-39 172.0
33 TraesCS2B01G620400 chr3B 78.049 287 51 6 2113 2398 6664299 6664024 1.220000e-38 171.0
34 TraesCS2B01G620400 chr3B 77.005 187 32 6 1909 2090 492571682 492571862 2.090000e-16 97.1
35 TraesCS2B01G620400 chrUn 70.794 945 223 44 613 1533 31593217 31594132 1.570000e-37 167.0
36 TraesCS2B01G620400 chr6D 76.426 263 48 6 2113 2374 109874913 109875162 2.070000e-26 130.0
37 TraesCS2B01G620400 chr7B 92.157 51 0 1 2044 2090 577202917 577202967 4.570000e-08 69.4
38 TraesCS2B01G620400 chr5D 84.416 77 5 4 2016 2087 67346451 67346525 4.570000e-08 69.4
39 TraesCS2B01G620400 chr4D 81.395 86 11 2 2015 2096 352290352 352290268 5.910000e-07 65.8
40 TraesCS2B01G620400 chr5B 84.375 64 8 2 2014 2076 696724830 696724892 7.640000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G620400 chr2B 794906440 794908997 2557 True 4724.0 4724 100.00000 1 2558 1 chr2B.!!$R1 2557
1 TraesCS2B01G620400 chr2A 762414175 762415990 1815 False 1155.5 1884 90.48750 187 1906 2 chr2A.!!$F7 1719
2 TraesCS2B01G620400 chr2A 762389632 762392557 2925 False 771.1 1458 93.92550 10 1588 2 chr2A.!!$F6 1578
3 TraesCS2B01G620400 chr2D 637586714 637588879 2165 True 671.0 1561 92.79825 187 2041 4 chr2D.!!$R4 1854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 85 0.032815 TCGCCAACGTGAGATGTCAA 59.967 50.0 0.0 0.0 41.18 3.18 F
220 280 0.178873 TAACCCTGACAAGGCCCTCT 60.179 55.0 0.0 0.0 42.96 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1420 3073 0.041238 TGACCCTGTAGAGGAGTGGG 59.959 60.0 7.68 0.0 42.93 4.61 R
2139 3860 0.107066 TGTGCGGCTTCATCATCCAT 60.107 50.0 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.005630 GCCGAGGAATCCGAGGATG 60.006 63.158 17.74 0.00 34.70 3.51
30 31 0.034616 GAGGAATCCGAGGATGCAGG 59.965 60.000 11.95 0.00 34.70 4.85
63 64 4.796231 GCCGGCGCTCTTTCTCGA 62.796 66.667 12.58 0.00 0.00 4.04
64 65 2.105128 CCGGCGCTCTTTCTCGAT 59.895 61.111 7.64 0.00 0.00 3.59
65 66 1.946650 CCGGCGCTCTTTCTCGATC 60.947 63.158 7.64 0.00 0.00 3.69
66 67 2.289375 CGGCGCTCTTTCTCGATCG 61.289 63.158 9.36 9.36 0.00 3.69
68 69 2.581367 GCGCTCTTTCTCGATCGCC 61.581 63.158 11.09 0.00 41.22 5.54
70 72 0.802222 CGCTCTTTCTCGATCGCCAA 60.802 55.000 11.09 2.06 0.00 4.52
79 81 0.525455 TCGATCGCCAACGTGAGATG 60.525 55.000 11.09 0.00 41.18 2.90
83 85 0.032815 TCGCCAACGTGAGATGTCAA 59.967 50.000 0.00 0.00 41.18 3.18
84 86 1.078709 CGCCAACGTGAGATGTCAAT 58.921 50.000 0.00 0.00 33.27 2.57
85 87 1.201954 CGCCAACGTGAGATGTCAATG 60.202 52.381 0.00 0.00 33.27 2.82
86 88 1.806542 GCCAACGTGAGATGTCAATGT 59.193 47.619 0.00 0.00 33.27 2.71
93 95 4.864806 ACGTGAGATGTCAATGTGATACAC 59.135 41.667 0.00 0.00 33.27 2.90
94 96 4.268644 CGTGAGATGTCAATGTGATACACC 59.731 45.833 0.00 0.00 33.27 4.16
96 98 3.797039 AGATGTCAATGTGATACACCGG 58.203 45.455 0.00 0.00 32.73 5.28
97 99 2.394930 TGTCAATGTGATACACCGGG 57.605 50.000 6.32 0.00 32.73 5.73
98 100 1.903183 TGTCAATGTGATACACCGGGA 59.097 47.619 6.32 0.00 32.73 5.14
100 102 2.167693 GTCAATGTGATACACCGGGAGA 59.832 50.000 6.32 0.00 32.73 3.71
101 103 3.038280 TCAATGTGATACACCGGGAGAT 58.962 45.455 6.32 0.00 32.73 2.75
103 105 2.153034 TGTGATACACCGGGAGATGA 57.847 50.000 6.32 0.00 32.73 2.92
110 131 1.305046 ACCGGGAGATGACGTTCCT 60.305 57.895 6.32 0.00 33.85 3.36
120 141 0.750249 TGACGTTCCTGAGTCAAGCA 59.250 50.000 0.00 0.00 43.47 3.91
132 171 2.481952 GAGTCAAGCACAGATGTCCAAC 59.518 50.000 0.00 0.00 0.00 3.77
165 225 2.686915 GGAGGAGGAGATGCAACAAATG 59.313 50.000 0.00 0.00 0.00 2.32
173 233 4.262164 GGAGATGCAACAAATGAACAAGGT 60.262 41.667 0.00 0.00 0.00 3.50
174 234 5.048083 GGAGATGCAACAAATGAACAAGGTA 60.048 40.000 0.00 0.00 0.00 3.08
175 235 6.403866 AGATGCAACAAATGAACAAGGTAA 57.596 33.333 0.00 0.00 0.00 2.85
176 236 6.815089 AGATGCAACAAATGAACAAGGTAAA 58.185 32.000 0.00 0.00 0.00 2.01
178 238 5.724328 TGCAACAAATGAACAAGGTAAACA 58.276 33.333 0.00 0.00 0.00 2.83
181 241 6.091441 GCAACAAATGAACAAGGTAAACAACA 59.909 34.615 0.00 0.00 0.00 3.33
182 242 7.360438 GCAACAAATGAACAAGGTAAACAACAA 60.360 33.333 0.00 0.00 0.00 2.83
184 244 7.382898 ACAAATGAACAAGGTAAACAACAAGT 58.617 30.769 0.00 0.00 0.00 3.16
185 245 7.330700 ACAAATGAACAAGGTAAACAACAAGTG 59.669 33.333 0.00 0.00 0.00 3.16
189 249 1.699730 AGGTAAACAACAAGTGGGCC 58.300 50.000 0.00 0.00 0.00 5.80
204 264 3.014623 GTGGGCCTACCTTGTTGATAAC 58.985 50.000 8.31 0.00 41.11 1.89
220 280 0.178873 TAACCCTGACAAGGCCCTCT 60.179 55.000 0.00 0.00 42.96 3.69
275 335 2.514824 GATTCAGTCCCGGCTGGC 60.515 66.667 5.85 0.00 37.12 4.85
276 336 3.329542 GATTCAGTCCCGGCTGGCA 62.330 63.158 5.85 0.00 37.12 4.92
277 337 2.615227 GATTCAGTCCCGGCTGGCAT 62.615 60.000 5.85 2.68 37.12 4.40
287 347 2.189499 GGCTGGCATCATCGGTTCC 61.189 63.158 0.00 0.00 0.00 3.62
384 453 5.050227 GCTCAGCATCTCACAGCTTATAAAG 60.050 44.000 0.00 0.00 39.50 1.85
386 455 6.643388 TCAGCATCTCACAGCTTATAAAGAA 58.357 36.000 0.00 0.00 39.50 2.52
393 462 6.595326 TCTCACAGCTTATAAAGAACCACATG 59.405 38.462 0.00 0.00 0.00 3.21
404 473 1.902508 GAACCACATGTCTCCTCCTCA 59.097 52.381 0.00 0.00 0.00 3.86
419 488 2.755655 CTCCTCATGACTACAAGGACGT 59.244 50.000 0.00 0.00 31.93 4.34
420 489 2.753452 TCCTCATGACTACAAGGACGTC 59.247 50.000 7.13 7.13 30.73 4.34
421 490 2.159226 CCTCATGACTACAAGGACGTCC 60.159 54.545 27.67 27.67 0.00 4.79
574 1924 7.818493 ATATGATTCAGTTTCCATATCGACG 57.182 36.000 0.00 0.00 29.10 5.12
590 1940 8.286800 CCATATCGACGCAAAAATAATTCCTTA 58.713 33.333 0.00 0.00 0.00 2.69
804 2294 2.549754 CACAACCGCAACATTCTCTTCT 59.450 45.455 0.00 0.00 0.00 2.85
811 2301 3.428452 CGCAACATTCTCTTCTACCGGTA 60.428 47.826 14.95 14.95 0.00 4.02
850 2340 4.464951 ACGACTCACCCAAGATGTATGTAA 59.535 41.667 0.00 0.00 0.00 2.41
851 2341 5.046878 ACGACTCACCCAAGATGTATGTAAA 60.047 40.000 0.00 0.00 0.00 2.01
852 2342 5.520288 CGACTCACCCAAGATGTATGTAAAG 59.480 44.000 0.00 0.00 0.00 1.85
853 2343 6.374417 ACTCACCCAAGATGTATGTAAAGT 57.626 37.500 0.00 0.00 0.00 2.66
854 2344 7.490657 ACTCACCCAAGATGTATGTAAAGTA 57.509 36.000 0.00 0.00 0.00 2.24
915 2568 9.477484 AGTTTGTTTCTATCAAGTACAGTACAG 57.523 33.333 13.37 5.29 0.00 2.74
917 2570 8.812147 TTGTTTCTATCAAGTACAGTACAGTG 57.188 34.615 13.37 10.19 0.00 3.66
918 2571 8.173542 TGTTTCTATCAAGTACAGTACAGTGA 57.826 34.615 13.37 14.75 32.09 3.41
919 2572 8.803235 TGTTTCTATCAAGTACAGTACAGTGAT 58.197 33.333 23.37 23.37 38.46 3.06
920 2573 9.640963 GTTTCTATCAAGTACAGTACAGTGATT 57.359 33.333 24.33 14.37 37.13 2.57
951 2604 1.871126 GCTGCTTGCAGGACCCTTTC 61.871 60.000 21.98 1.46 42.31 2.62
1088 2741 4.267928 CAGCTATAGTTACGGCTTTGACAC 59.732 45.833 0.84 0.00 32.30 3.67
1189 2842 4.963815 CCATTGTTGGTGTTCGCC 57.036 55.556 0.00 0.00 38.30 5.54
1248 2901 2.155279 GTTTCTTGCTCCTTGTCTCCC 58.845 52.381 0.00 0.00 0.00 4.30
1249 2902 0.693049 TTCTTGCTCCTTGTCTCCCC 59.307 55.000 0.00 0.00 0.00 4.81
1420 3073 2.301577 AGCTTACTCGAATGCTGGTC 57.698 50.000 0.00 0.00 34.19 4.02
1458 3111 5.003804 GGTCATGTGAACTTTCCTGTACAT 58.996 41.667 0.00 0.00 0.00 2.29
1767 3440 9.925268 CAAAAACAAACTATACTGACTTACGTT 57.075 29.630 0.00 0.00 0.00 3.99
1810 3484 1.295020 ATAACTAGCAAGGTGGCCCA 58.705 50.000 0.00 0.00 0.00 5.36
1868 3542 7.476667 TGTTTTGATTAAGGTGTAGTTGTGTG 58.523 34.615 0.00 0.00 0.00 3.82
1880 3554 7.227910 AGGTGTAGTTGTGTGGTTATGTTTTAG 59.772 37.037 0.00 0.00 0.00 1.85
1909 3627 3.368427 CGCAAAGGAGTCTTGTATCCAGA 60.368 47.826 0.00 0.00 38.12 3.86
2054 3775 8.690203 AGCACATTATAAGGTACATATTTGCA 57.310 30.769 1.88 0.00 0.00 4.08
2055 3776 8.567948 AGCACATTATAAGGTACATATTTGCAC 58.432 33.333 1.88 0.00 0.00 4.57
2056 3777 8.349245 GCACATTATAAGGTACATATTTGCACA 58.651 33.333 1.88 0.00 0.00 4.57
2057 3778 9.663904 CACATTATAAGGTACATATTTGCACAC 57.336 33.333 1.88 0.00 0.00 3.82
2058 3779 9.402320 ACATTATAAGGTACATATTTGCACACA 57.598 29.630 0.00 0.00 0.00 3.72
2074 3795 9.669887 ATTTGCACACATATTAAATCCAAACAT 57.330 25.926 0.00 0.00 0.00 2.71
2089 3810 8.415950 AATCCAAACATATTAAGGTTCACACA 57.584 30.769 0.00 0.00 0.00 3.72
2090 3811 7.209471 TCCAAACATATTAAGGTTCACACAC 57.791 36.000 0.00 0.00 0.00 3.82
2091 3812 7.001674 TCCAAACATATTAAGGTTCACACACT 58.998 34.615 0.00 0.00 0.00 3.55
2092 3813 7.504238 TCCAAACATATTAAGGTTCACACACTT 59.496 33.333 0.00 0.00 0.00 3.16
2093 3814 8.141268 CCAAACATATTAAGGTTCACACACTTT 58.859 33.333 0.00 0.00 0.00 2.66
2096 3817 8.911918 ACATATTAAGGTTCACACACTTTACA 57.088 30.769 0.00 0.00 0.00 2.41
2097 3818 8.780249 ACATATTAAGGTTCACACACTTTACAC 58.220 33.333 0.00 0.00 0.00 2.90
2098 3819 8.999431 CATATTAAGGTTCACACACTTTACACT 58.001 33.333 0.00 0.00 0.00 3.55
2101 3822 8.597662 TTAAGGTTCACACACTTTACACTATC 57.402 34.615 0.00 0.00 0.00 2.08
2102 3823 5.548406 AGGTTCACACACTTTACACTATCC 58.452 41.667 0.00 0.00 0.00 2.59
2103 3824 4.387862 GGTTCACACACTTTACACTATCCG 59.612 45.833 0.00 0.00 0.00 4.18
2104 3825 5.224888 GTTCACACACTTTACACTATCCGA 58.775 41.667 0.00 0.00 0.00 4.55
2105 3826 5.654603 TCACACACTTTACACTATCCGAT 57.345 39.130 0.00 0.00 0.00 4.18
2106 3827 5.647589 TCACACACTTTACACTATCCGATC 58.352 41.667 0.00 0.00 0.00 3.69
2107 3828 5.184287 TCACACACTTTACACTATCCGATCA 59.816 40.000 0.00 0.00 0.00 2.92
2108 3829 6.042777 CACACACTTTACACTATCCGATCAT 58.957 40.000 0.00 0.00 0.00 2.45
2109 3830 6.019559 CACACACTTTACACTATCCGATCATG 60.020 42.308 0.00 0.00 0.00 3.07
2110 3831 6.042777 CACACTTTACACTATCCGATCATGT 58.957 40.000 0.00 3.60 0.00 3.21
2111 3832 7.147966 ACACACTTTACACTATCCGATCATGTA 60.148 37.037 0.00 2.04 0.00 2.29
2112 3833 7.379797 CACACTTTACACTATCCGATCATGTAG 59.620 40.741 0.00 0.00 0.00 2.74
2113 3834 7.068348 ACACTTTACACTATCCGATCATGTAGT 59.932 37.037 0.00 0.00 0.00 2.73
2114 3835 8.565416 CACTTTACACTATCCGATCATGTAGTA 58.435 37.037 0.00 0.00 0.00 1.82
2115 3836 8.784994 ACTTTACACTATCCGATCATGTAGTAG 58.215 37.037 0.00 8.42 0.00 2.57
2116 3837 8.687292 TTTACACTATCCGATCATGTAGTAGT 57.313 34.615 0.00 2.38 0.00 2.73
2117 3838 6.804770 ACACTATCCGATCATGTAGTAGTC 57.195 41.667 0.00 0.00 0.00 2.59
2118 3839 6.296803 ACACTATCCGATCATGTAGTAGTCA 58.703 40.000 0.00 0.00 0.00 3.41
2119 3840 6.943146 ACACTATCCGATCATGTAGTAGTCAT 59.057 38.462 0.00 0.00 0.00 3.06
2120 3841 7.094592 ACACTATCCGATCATGTAGTAGTCATG 60.095 40.741 0.00 0.00 42.53 3.07
2121 3842 5.651387 ATCCGATCATGTAGTAGTCATGG 57.349 43.478 6.15 0.00 41.79 3.66
2122 3843 4.470602 TCCGATCATGTAGTAGTCATGGT 58.529 43.478 6.15 0.00 41.79 3.55
2123 3844 4.519350 TCCGATCATGTAGTAGTCATGGTC 59.481 45.833 8.54 8.54 44.89 4.02
2125 3846 5.690997 GATCATGTAGTAGTCATGGTCGA 57.309 43.478 3.92 0.00 41.45 4.20
2126 3847 4.895224 TCATGTAGTAGTCATGGTCGAC 57.105 45.455 7.13 7.13 41.79 4.20
2127 3848 3.311596 TCATGTAGTAGTCATGGTCGACG 59.688 47.826 9.92 0.00 41.79 5.12
2128 3849 2.011947 TGTAGTAGTCATGGTCGACGG 58.988 52.381 9.92 1.63 40.98 4.79
2129 3850 2.012673 GTAGTAGTCATGGTCGACGGT 58.987 52.381 9.92 0.00 40.98 4.83
2130 3851 0.809385 AGTAGTCATGGTCGACGGTG 59.191 55.000 9.92 10.76 40.98 4.94
2131 3852 0.524862 GTAGTCATGGTCGACGGTGT 59.475 55.000 9.92 0.00 40.98 4.16
2132 3853 1.739466 GTAGTCATGGTCGACGGTGTA 59.261 52.381 9.92 0.00 40.98 2.90
2133 3854 0.809385 AGTCATGGTCGACGGTGTAG 59.191 55.000 9.92 0.00 40.98 2.74
2134 3855 0.524862 GTCATGGTCGACGGTGTAGT 59.475 55.000 9.92 0.00 0.00 2.73
2135 3856 0.806868 TCATGGTCGACGGTGTAGTC 59.193 55.000 9.92 0.00 37.76 2.59
2143 3864 2.951269 ACGGTGTAGTCGTCATGGA 58.049 52.632 0.00 0.00 35.87 3.41
2144 3865 1.471119 ACGGTGTAGTCGTCATGGAT 58.529 50.000 0.00 0.00 35.87 3.41
2145 3866 1.134367 ACGGTGTAGTCGTCATGGATG 59.866 52.381 0.00 0.00 35.87 3.51
2146 3867 1.404035 CGGTGTAGTCGTCATGGATGA 59.596 52.381 0.00 0.00 0.00 2.92
2147 3868 2.034685 CGGTGTAGTCGTCATGGATGAT 59.965 50.000 0.00 0.00 39.30 2.45
2148 3869 3.384668 GGTGTAGTCGTCATGGATGATG 58.615 50.000 2.84 2.84 43.48 3.07
2153 3874 2.245159 TCGTCATGGATGATGAAGCC 57.755 50.000 8.77 0.00 46.58 4.35
2154 3875 0.863799 CGTCATGGATGATGAAGCCG 59.136 55.000 3.11 0.00 44.59 5.52
2155 3876 0.590195 GTCATGGATGATGAAGCCGC 59.410 55.000 0.00 0.00 42.96 6.53
2156 3877 0.180878 TCATGGATGATGAAGCCGCA 59.819 50.000 0.00 0.00 38.19 5.69
2157 3878 0.309922 CATGGATGATGAAGCCGCAC 59.690 55.000 0.00 0.00 33.31 5.34
2158 3879 0.107066 ATGGATGATGAAGCCGCACA 60.107 50.000 0.00 0.00 0.00 4.57
2159 3880 0.322366 TGGATGATGAAGCCGCACAA 60.322 50.000 0.00 0.00 0.00 3.33
2160 3881 0.810648 GGATGATGAAGCCGCACAAA 59.189 50.000 0.00 0.00 0.00 2.83
2161 3882 1.202222 GGATGATGAAGCCGCACAAAG 60.202 52.381 0.00 0.00 0.00 2.77
2162 3883 0.171903 ATGATGAAGCCGCACAAAGC 59.828 50.000 0.00 0.00 40.87 3.51
2163 3884 0.890542 TGATGAAGCCGCACAAAGCT 60.891 50.000 0.00 0.00 42.61 3.74
2164 3885 0.455633 GATGAAGCCGCACAAAGCTG 60.456 55.000 0.00 0.00 39.87 4.24
2165 3886 0.890542 ATGAAGCCGCACAAAGCTGA 60.891 50.000 0.00 0.00 39.87 4.26
2166 3887 1.100463 TGAAGCCGCACAAAGCTGAA 61.100 50.000 0.00 0.00 39.87 3.02
2167 3888 0.030638 GAAGCCGCACAAAGCTGAAA 59.969 50.000 0.00 0.00 39.87 2.69
2168 3889 0.031178 AAGCCGCACAAAGCTGAAAG 59.969 50.000 0.00 0.00 39.87 2.62
2199 3920 8.487313 AAAATTACGCTATGTTGTAGATGACA 57.513 30.769 0.00 0.00 35.78 3.58
2200 3921 8.487313 AAATTACGCTATGTTGTAGATGACAA 57.513 30.769 0.00 0.00 46.03 3.18
2209 3930 4.488126 TTGTAGATGACAAAGTTGCAGC 57.512 40.909 0.00 0.00 45.23 5.25
2210 3931 2.813754 TGTAGATGACAAAGTTGCAGCC 59.186 45.455 0.00 0.00 34.15 4.85
2211 3932 0.877071 AGATGACAAAGTTGCAGCCG 59.123 50.000 0.00 0.00 0.00 5.52
2212 3933 0.593128 GATGACAAAGTTGCAGCCGT 59.407 50.000 0.00 0.00 0.00 5.68
2213 3934 0.311790 ATGACAAAGTTGCAGCCGTG 59.688 50.000 0.00 0.00 0.00 4.94
2214 3935 1.008538 GACAAAGTTGCAGCCGTGG 60.009 57.895 0.00 0.00 0.00 4.94
2215 3936 1.444119 GACAAAGTTGCAGCCGTGGA 61.444 55.000 0.00 0.00 0.00 4.02
2216 3937 0.823356 ACAAAGTTGCAGCCGTGGAT 60.823 50.000 0.00 0.00 0.00 3.41
2217 3938 0.387622 CAAAGTTGCAGCCGTGGATG 60.388 55.000 0.00 0.00 34.24 3.51
2218 3939 0.537143 AAAGTTGCAGCCGTGGATGA 60.537 50.000 8.61 0.00 32.62 2.92
2219 3940 1.237285 AAGTTGCAGCCGTGGATGAC 61.237 55.000 8.61 0.00 32.62 3.06
2227 3948 3.168271 CGTGGATGACGCACCTTG 58.832 61.111 0.00 0.00 42.21 3.61
2228 3949 2.870372 GTGGATGACGCACCTTGC 59.130 61.111 0.00 0.00 40.69 4.01
2229 3950 1.965930 GTGGATGACGCACCTTGCA 60.966 57.895 0.00 0.00 45.36 4.08
2230 3951 1.672030 TGGATGACGCACCTTGCAG 60.672 57.895 0.00 0.00 45.36 4.41
2231 3952 1.375908 GGATGACGCACCTTGCAGA 60.376 57.895 0.00 0.00 45.36 4.26
2232 3953 0.745845 GGATGACGCACCTTGCAGAT 60.746 55.000 0.00 0.00 45.36 2.90
2233 3954 0.376152 GATGACGCACCTTGCAGATG 59.624 55.000 0.00 0.00 45.36 2.90
2234 3955 0.321919 ATGACGCACCTTGCAGATGT 60.322 50.000 0.00 0.00 45.36 3.06
2235 3956 0.950555 TGACGCACCTTGCAGATGTC 60.951 55.000 0.00 0.00 45.36 3.06
2236 3957 0.950555 GACGCACCTTGCAGATGTCA 60.951 55.000 0.00 0.00 45.36 3.58
2237 3958 0.952497 ACGCACCTTGCAGATGTCAG 60.952 55.000 0.00 0.00 45.36 3.51
2238 3959 0.671472 CGCACCTTGCAGATGTCAGA 60.671 55.000 0.00 0.00 45.36 3.27
2239 3960 1.085091 GCACCTTGCAGATGTCAGAG 58.915 55.000 0.00 0.00 44.26 3.35
2240 3961 1.735386 CACCTTGCAGATGTCAGAGG 58.265 55.000 0.00 0.00 0.00 3.69
2241 3962 0.617413 ACCTTGCAGATGTCAGAGGG 59.383 55.000 2.09 0.00 0.00 4.30
2242 3963 0.617413 CCTTGCAGATGTCAGAGGGT 59.383 55.000 0.00 0.00 0.00 4.34
2243 3964 1.678123 CCTTGCAGATGTCAGAGGGTG 60.678 57.143 0.00 0.00 0.00 4.61
2244 3965 1.002888 CTTGCAGATGTCAGAGGGTGT 59.997 52.381 0.00 0.00 0.00 4.16
2245 3966 0.610174 TGCAGATGTCAGAGGGTGTC 59.390 55.000 0.00 0.00 0.00 3.67
2246 3967 0.610174 GCAGATGTCAGAGGGTGTCA 59.390 55.000 0.00 0.00 0.00 3.58
2247 3968 1.209019 GCAGATGTCAGAGGGTGTCAT 59.791 52.381 0.00 0.00 37.59 3.06
2248 3969 2.741228 GCAGATGTCAGAGGGTGTCATC 60.741 54.545 4.65 4.65 46.35 2.92
2249 3970 2.215907 GATGTCAGAGGGTGTCATCG 57.784 55.000 0.00 0.00 40.41 3.84
2250 3971 0.826715 ATGTCAGAGGGTGTCATCGG 59.173 55.000 0.00 0.00 29.99 4.18
2251 3972 1.153549 GTCAGAGGGTGTCATCGGC 60.154 63.158 0.00 0.00 0.00 5.54
2252 3973 2.202797 CAGAGGGTGTCATCGGCG 60.203 66.667 0.00 0.00 0.00 6.46
2253 3974 2.362503 AGAGGGTGTCATCGGCGA 60.363 61.111 13.87 13.87 0.00 5.54
2254 3975 1.758514 AGAGGGTGTCATCGGCGAT 60.759 57.895 18.14 18.14 0.00 4.58
2255 3976 1.592669 GAGGGTGTCATCGGCGATG 60.593 63.158 37.07 37.07 41.00 3.84
2256 3977 2.016393 GAGGGTGTCATCGGCGATGA 62.016 60.000 39.96 39.96 45.35 2.92
2261 3982 3.933515 TCATCGGCGATGAGTCCA 58.066 55.556 39.96 23.33 43.11 4.02
2262 3983 1.437573 TCATCGGCGATGAGTCCAC 59.562 57.895 39.96 0.00 43.11 4.02
2263 3984 1.592669 CATCGGCGATGAGTCCACC 60.593 63.158 39.06 0.00 42.09 4.61
2264 3985 3.138930 ATCGGCGATGAGTCCACCG 62.139 63.158 23.36 0.00 40.25 4.94
2266 3987 4.148825 GGCGATGAGTCCACCGCT 62.149 66.667 16.57 0.00 46.02 5.52
2267 3988 2.125512 GCGATGAGTCCACCGCTT 60.126 61.111 11.87 0.00 43.75 4.68
2268 3989 1.741770 GCGATGAGTCCACCGCTTT 60.742 57.895 11.87 0.00 43.75 3.51
2269 3990 1.298859 GCGATGAGTCCACCGCTTTT 61.299 55.000 11.87 0.00 43.75 2.27
2270 3991 1.156736 CGATGAGTCCACCGCTTTTT 58.843 50.000 0.00 0.00 0.00 1.94
2271 3992 1.128692 CGATGAGTCCACCGCTTTTTC 59.871 52.381 0.00 0.00 0.00 2.29
2272 3993 2.151202 GATGAGTCCACCGCTTTTTCA 58.849 47.619 0.00 0.00 0.00 2.69
2273 3994 1.593196 TGAGTCCACCGCTTTTTCAG 58.407 50.000 0.00 0.00 0.00 3.02
2274 3995 0.875059 GAGTCCACCGCTTTTTCAGG 59.125 55.000 0.00 0.00 0.00 3.86
2275 3996 0.472471 AGTCCACCGCTTTTTCAGGA 59.528 50.000 0.00 0.00 0.00 3.86
2276 3997 0.591659 GTCCACCGCTTTTTCAGGAC 59.408 55.000 0.00 0.00 38.77 3.85
2277 3998 0.536460 TCCACCGCTTTTTCAGGACC 60.536 55.000 0.00 0.00 0.00 4.46
2278 3999 1.574428 CACCGCTTTTTCAGGACCG 59.426 57.895 0.00 0.00 0.00 4.79
2279 4000 1.599797 ACCGCTTTTTCAGGACCGG 60.600 57.895 0.00 0.00 41.31 5.28
2280 4001 1.302192 CCGCTTTTTCAGGACCGGA 60.302 57.895 9.46 0.00 38.04 5.14
2281 4002 1.298859 CCGCTTTTTCAGGACCGGAG 61.299 60.000 9.46 0.00 38.04 4.63
2304 4025 2.044053 CCATCGGGGGCACACATT 60.044 61.111 0.00 0.00 0.00 2.71
2305 4026 2.417257 CCATCGGGGGCACACATTG 61.417 63.158 0.00 0.00 0.00 2.82
2306 4027 2.044053 ATCGGGGGCACACATTGG 60.044 61.111 0.00 0.00 0.00 3.16
2307 4028 2.917897 ATCGGGGGCACACATTGGT 61.918 57.895 0.00 0.00 0.00 3.67
2308 4029 2.439553 ATCGGGGGCACACATTGGTT 62.440 55.000 0.00 0.00 0.00 3.67
2309 4030 2.206536 CGGGGGCACACATTGGTTT 61.207 57.895 0.00 0.00 0.00 3.27
2310 4031 1.753368 CGGGGGCACACATTGGTTTT 61.753 55.000 0.00 0.00 0.00 2.43
2311 4032 0.250252 GGGGGCACACATTGGTTTTG 60.250 55.000 0.00 0.00 0.00 2.44
2312 4033 0.884259 GGGGCACACATTGGTTTTGC 60.884 55.000 0.00 0.00 34.20 3.68
2313 4034 0.884259 GGGCACACATTGGTTTTGCC 60.884 55.000 2.16 2.16 46.37 4.52
2314 4035 0.179062 GGCACACATTGGTTTTGCCA 60.179 50.000 6.04 0.00 46.36 4.92
2321 4042 4.668151 TGGTTTTGCCAAGACCGT 57.332 50.000 12.04 0.00 45.94 4.83
2322 4043 2.889200 TGGTTTTGCCAAGACCGTT 58.111 47.368 12.04 0.00 45.94 4.44
2323 4044 1.187087 TGGTTTTGCCAAGACCGTTT 58.813 45.000 12.04 0.00 45.94 3.60
2324 4045 1.134965 TGGTTTTGCCAAGACCGTTTG 60.135 47.619 12.04 0.00 45.94 2.93
2325 4046 4.362206 TGGTTTTGCCAAGACCGTTTGG 62.362 50.000 12.04 6.30 45.94 3.28
2329 4050 2.593436 CCAAGACCGTTTGGCCGT 60.593 61.111 0.00 0.00 41.02 5.68
2330 4051 2.637025 CAAGACCGTTTGGCCGTG 59.363 61.111 0.00 0.00 39.70 4.94
2331 4052 1.890041 CAAGACCGTTTGGCCGTGA 60.890 57.895 0.00 0.00 39.70 4.35
2332 4053 1.153127 AAGACCGTTTGGCCGTGAA 60.153 52.632 0.00 0.00 39.70 3.18
2333 4054 0.748729 AAGACCGTTTGGCCGTGAAA 60.749 50.000 0.00 0.00 39.70 2.69
2334 4055 1.164041 AGACCGTTTGGCCGTGAAAG 61.164 55.000 0.00 0.00 39.70 2.62
2335 4056 2.125202 GACCGTTTGGCCGTGAAAGG 62.125 60.000 13.91 13.91 39.70 3.11
2336 4057 2.642700 CGTTTGGCCGTGAAAGGG 59.357 61.111 0.00 0.00 46.87 3.95
2337 4058 2.914908 CGTTTGGCCGTGAAAGGGG 61.915 63.158 0.00 0.00 43.56 4.79
2342 4063 3.140814 GCCGTGAAAGGGGCCATC 61.141 66.667 4.39 0.41 43.56 3.51
2343 4064 2.354729 CCGTGAAAGGGGCCATCA 59.645 61.111 4.39 3.55 38.48 3.07
2344 4065 1.750399 CCGTGAAAGGGGCCATCAG 60.750 63.158 4.39 1.47 38.48 2.90
2345 4066 1.002134 CGTGAAAGGGGCCATCAGT 60.002 57.895 4.39 0.00 0.00 3.41
2346 4067 0.251916 CGTGAAAGGGGCCATCAGTA 59.748 55.000 4.39 0.00 0.00 2.74
2347 4068 1.339631 CGTGAAAGGGGCCATCAGTAA 60.340 52.381 4.39 0.00 0.00 2.24
2348 4069 2.802719 GTGAAAGGGGCCATCAGTAAA 58.197 47.619 4.39 0.00 0.00 2.01
2349 4070 2.755103 GTGAAAGGGGCCATCAGTAAAG 59.245 50.000 4.39 0.00 0.00 1.85
2350 4071 2.378547 TGAAAGGGGCCATCAGTAAAGT 59.621 45.455 4.39 0.00 0.00 2.66
2351 4072 3.181423 TGAAAGGGGCCATCAGTAAAGTT 60.181 43.478 4.39 0.00 0.00 2.66
2352 4073 4.043561 TGAAAGGGGCCATCAGTAAAGTTA 59.956 41.667 4.39 0.00 0.00 2.24
2353 4074 3.646736 AGGGGCCATCAGTAAAGTTAC 57.353 47.619 4.39 0.00 0.00 2.50
2354 4075 2.916934 AGGGGCCATCAGTAAAGTTACA 59.083 45.455 4.39 0.00 36.12 2.41
2355 4076 3.332485 AGGGGCCATCAGTAAAGTTACAA 59.668 43.478 4.39 0.00 36.12 2.41
2356 4077 3.442625 GGGGCCATCAGTAAAGTTACAAC 59.557 47.826 4.39 0.00 36.12 3.32
2357 4078 3.126343 GGGCCATCAGTAAAGTTACAACG 59.874 47.826 4.39 0.00 36.12 4.10
2358 4079 3.749609 GGCCATCAGTAAAGTTACAACGT 59.250 43.478 0.00 0.00 36.12 3.99
2359 4080 4.378046 GGCCATCAGTAAAGTTACAACGTG 60.378 45.833 0.00 0.00 36.12 4.49
2360 4081 4.212636 GCCATCAGTAAAGTTACAACGTGT 59.787 41.667 4.14 0.00 36.12 4.49
2361 4082 5.614013 GCCATCAGTAAAGTTACAACGTGTC 60.614 44.000 4.14 0.00 36.12 3.67
2362 4083 5.388061 CCATCAGTAAAGTTACAACGTGTCG 60.388 44.000 4.14 0.00 36.12 4.35
2363 4084 4.919206 TCAGTAAAGTTACAACGTGTCGA 58.081 39.130 4.14 0.00 36.12 4.20
2364 4085 5.522456 TCAGTAAAGTTACAACGTGTCGAT 58.478 37.500 4.14 0.00 36.12 3.59
2365 4086 5.400188 TCAGTAAAGTTACAACGTGTCGATG 59.600 40.000 4.14 0.00 36.12 3.84
2366 4087 3.515071 AAAGTTACAACGTGTCGATGC 57.485 42.857 0.00 0.00 33.06 3.91
2367 4088 2.143008 AGTTACAACGTGTCGATGCA 57.857 45.000 0.00 0.00 33.06 3.96
2368 4089 2.058798 AGTTACAACGTGTCGATGCAG 58.941 47.619 0.00 0.00 33.06 4.41
2369 4090 1.790623 GTTACAACGTGTCGATGCAGT 59.209 47.619 0.00 0.00 33.06 4.40
2370 4091 1.693467 TACAACGTGTCGATGCAGTC 58.307 50.000 0.00 0.00 33.06 3.51
2371 4092 0.249280 ACAACGTGTCGATGCAGTCA 60.249 50.000 0.00 0.00 33.06 3.41
2372 4093 1.070821 CAACGTGTCGATGCAGTCAT 58.929 50.000 0.00 0.00 35.17 3.06
2373 4094 1.070821 AACGTGTCGATGCAGTCATG 58.929 50.000 0.00 0.00 31.96 3.07
2374 4095 0.243636 ACGTGTCGATGCAGTCATGA 59.756 50.000 0.00 0.00 31.96 3.07
2375 4096 0.642291 CGTGTCGATGCAGTCATGAC 59.358 55.000 18.47 18.47 34.39 3.06
2376 4097 0.642291 GTGTCGATGCAGTCATGACG 59.358 55.000 19.85 15.27 35.46 4.35
2377 4098 0.243636 TGTCGATGCAGTCATGACGT 59.756 50.000 19.85 7.88 35.46 4.34
2378 4099 0.917259 GTCGATGCAGTCATGACGTC 59.083 55.000 19.85 9.11 36.20 4.34
2379 4100 0.523335 TCGATGCAGTCATGACGTCG 60.523 55.000 25.75 25.75 40.34 5.12
2380 4101 0.798389 CGATGCAGTCATGACGTCGT 60.798 55.000 24.50 19.41 37.28 4.34
2381 4102 1.531058 CGATGCAGTCATGACGTCGTA 60.531 52.381 24.50 16.78 37.28 3.43
2382 4103 2.112522 GATGCAGTCATGACGTCGTAG 58.887 52.381 19.85 5.48 36.20 3.51
2383 4104 0.456142 TGCAGTCATGACGTCGTAGC 60.456 55.000 19.85 16.78 36.20 3.58
2384 4105 0.179161 GCAGTCATGACGTCGTAGCT 60.179 55.000 19.85 8.58 36.20 3.32
2385 4106 1.539341 CAGTCATGACGTCGTAGCTG 58.461 55.000 19.85 19.51 36.20 4.24
2386 4107 1.130561 CAGTCATGACGTCGTAGCTGA 59.869 52.381 24.70 14.34 36.20 4.26
2387 4108 1.398739 AGTCATGACGTCGTAGCTGAG 59.601 52.381 19.85 0.00 36.20 3.35
2388 4109 0.733150 TCATGACGTCGTAGCTGAGG 59.267 55.000 10.54 0.00 0.00 3.86
2389 4110 0.867753 CATGACGTCGTAGCTGAGGC 60.868 60.000 10.54 0.00 39.06 4.70
2390 4111 2.277373 GACGTCGTAGCTGAGGCG 60.277 66.667 14.23 14.23 44.37 5.52
2391 4112 3.736482 GACGTCGTAGCTGAGGCGG 62.736 68.421 18.71 4.35 44.37 6.13
2392 4113 3.506096 CGTCGTAGCTGAGGCGGA 61.506 66.667 9.02 0.00 44.37 5.54
2393 4114 2.102553 GTCGTAGCTGAGGCGGAC 59.897 66.667 0.00 0.00 44.37 4.79
2394 4115 2.360726 TCGTAGCTGAGGCGGACA 60.361 61.111 0.00 0.00 44.37 4.02
2395 4116 1.974875 TCGTAGCTGAGGCGGACAA 60.975 57.895 0.00 0.00 44.37 3.18
2396 4117 1.141881 CGTAGCTGAGGCGGACAAT 59.858 57.895 0.00 0.00 44.37 2.71
2397 4118 1.148157 CGTAGCTGAGGCGGACAATG 61.148 60.000 0.00 0.00 44.37 2.82
2398 4119 0.108138 GTAGCTGAGGCGGACAATGT 60.108 55.000 0.00 0.00 44.37 2.71
2399 4120 0.613260 TAGCTGAGGCGGACAATGTT 59.387 50.000 0.00 0.00 44.37 2.71
2400 4121 0.957395 AGCTGAGGCGGACAATGTTG 60.957 55.000 0.00 0.00 44.37 3.33
2401 4122 1.237285 GCTGAGGCGGACAATGTTGT 61.237 55.000 0.00 0.00 45.65 3.32
2414 4135 5.342806 ACAATGTTGTCATGTCGTTGTAG 57.657 39.130 13.87 0.00 38.82 2.74
2415 4136 5.053811 ACAATGTTGTCATGTCGTTGTAGA 58.946 37.500 13.87 0.00 38.82 2.59
2416 4137 5.700832 ACAATGTTGTCATGTCGTTGTAGAT 59.299 36.000 13.87 0.00 38.82 1.98
2417 4138 5.784750 ATGTTGTCATGTCGTTGTAGATG 57.215 39.130 0.00 0.00 32.51 2.90
2418 4139 4.877282 TGTTGTCATGTCGTTGTAGATGA 58.123 39.130 0.00 0.00 0.00 2.92
2419 4140 4.684242 TGTTGTCATGTCGTTGTAGATGAC 59.316 41.667 0.00 0.00 43.31 3.06
2420 4141 3.498082 TGTCATGTCGTTGTAGATGACG 58.502 45.455 0.00 0.00 45.09 4.35
2421 4142 3.057806 TGTCATGTCGTTGTAGATGACGT 60.058 43.478 0.00 0.00 45.09 4.34
2423 4144 2.341318 TGTCGTTGTAGATGACGTGG 57.659 50.000 0.00 0.00 45.48 4.94
2424 4145 1.610038 TGTCGTTGTAGATGACGTGGT 59.390 47.619 0.00 0.00 45.48 4.16
2425 4146 2.248487 GTCGTTGTAGATGACGTGGTC 58.752 52.381 0.00 0.00 40.03 4.02
2426 4147 1.135888 TCGTTGTAGATGACGTGGTCG 60.136 52.381 0.00 0.00 40.03 4.79
2427 4148 1.135888 CGTTGTAGATGACGTGGTCGA 60.136 52.381 0.00 0.00 40.62 4.20
2428 4149 2.477357 CGTTGTAGATGACGTGGTCGAT 60.477 50.000 0.00 0.00 40.62 3.59
2429 4150 2.844122 TGTAGATGACGTGGTCGATG 57.156 50.000 0.00 0.00 40.62 3.84
2430 4151 1.202256 TGTAGATGACGTGGTCGATGC 60.202 52.381 0.00 0.00 40.62 3.91
2431 4152 0.384309 TAGATGACGTGGTCGATGCC 59.616 55.000 0.00 0.00 40.62 4.40
2432 4153 1.153647 GATGACGTGGTCGATGCCA 60.154 57.895 0.00 0.00 40.62 4.92
2443 4164 4.327885 GATGCCACCGTCGAGATC 57.672 61.111 0.00 0.00 0.00 2.75
2444 4165 1.658717 GATGCCACCGTCGAGATCG 60.659 63.158 0.00 0.00 41.45 3.69
2445 4166 3.774959 ATGCCACCGTCGAGATCGC 62.775 63.158 0.00 0.00 39.60 4.58
2447 4168 4.175489 CCACCGTCGAGATCGCGT 62.175 66.667 18.44 0.00 39.60 6.01
2448 4169 2.705220 CACCGTCGAGATCGCGTA 59.295 61.111 18.44 2.99 39.60 4.42
2449 4170 1.650536 CACCGTCGAGATCGCGTAC 60.651 63.158 18.44 13.51 39.60 3.67
2450 4171 2.423198 CCGTCGAGATCGCGTACG 60.423 66.667 24.79 24.79 39.60 3.67
2451 4172 2.319032 CGTCGAGATCGCGTACGT 59.681 61.111 24.03 0.00 41.18 3.57
2452 4173 1.713698 CGTCGAGATCGCGTACGTC 60.714 63.158 24.03 6.70 41.18 4.34
2453 4174 1.635281 GTCGAGATCGCGTACGTCT 59.365 57.895 18.44 11.86 41.18 4.18
2454 4175 0.026027 GTCGAGATCGCGTACGTCTT 59.974 55.000 18.44 1.15 41.18 3.01
2455 4176 0.025898 TCGAGATCGCGTACGTCTTG 59.974 55.000 18.44 15.01 41.18 3.02
2456 4177 0.247576 CGAGATCGCGTACGTCTTGT 60.248 55.000 17.90 0.00 41.18 3.16
2457 4178 1.454722 GAGATCGCGTACGTCTTGTC 58.545 55.000 17.90 8.40 41.18 3.18
2458 4179 0.800631 AGATCGCGTACGTCTTGTCA 59.199 50.000 17.90 0.00 41.18 3.58
2459 4180 1.400846 AGATCGCGTACGTCTTGTCAT 59.599 47.619 17.90 0.00 41.18 3.06
2460 4181 2.159421 AGATCGCGTACGTCTTGTCATT 60.159 45.455 17.90 0.00 41.18 2.57
2461 4182 2.898181 TCGCGTACGTCTTGTCATTA 57.102 45.000 17.90 0.00 41.18 1.90
2462 4183 3.409851 TCGCGTACGTCTTGTCATTAT 57.590 42.857 17.90 0.00 41.18 1.28
2463 4184 4.534794 TCGCGTACGTCTTGTCATTATA 57.465 40.909 17.90 0.00 41.18 0.98
2464 4185 4.274069 TCGCGTACGTCTTGTCATTATAC 58.726 43.478 17.90 0.00 41.18 1.47
2465 4186 4.034394 TCGCGTACGTCTTGTCATTATACT 59.966 41.667 17.90 0.00 41.18 2.12
2466 4187 4.144221 CGCGTACGTCTTGTCATTATACTG 59.856 45.833 17.90 0.00 33.53 2.74
2467 4188 5.032863 GCGTACGTCTTGTCATTATACTGT 58.967 41.667 17.90 0.00 0.00 3.55
2468 4189 5.170981 GCGTACGTCTTGTCATTATACTGTC 59.829 44.000 17.90 0.00 0.00 3.51
2469 4190 6.253013 CGTACGTCTTGTCATTATACTGTCA 58.747 40.000 7.22 0.00 0.00 3.58
2470 4191 6.744082 CGTACGTCTTGTCATTATACTGTCAA 59.256 38.462 7.22 3.51 0.00 3.18
2471 4192 7.271868 CGTACGTCTTGTCATTATACTGTCAAA 59.728 37.037 7.22 0.00 0.00 2.69
2472 4193 7.582435 ACGTCTTGTCATTATACTGTCAAAG 57.418 36.000 4.78 1.96 0.00 2.77
2473 4194 6.590292 ACGTCTTGTCATTATACTGTCAAAGG 59.410 38.462 4.78 4.86 0.00 3.11
2474 4195 6.811665 CGTCTTGTCATTATACTGTCAAAGGA 59.188 38.462 4.78 0.00 0.00 3.36
2475 4196 7.201444 CGTCTTGTCATTATACTGTCAAAGGAC 60.201 40.741 10.90 10.90 44.57 3.85
2484 4205 3.842869 GTCAAAGGACGCTGGAGAT 57.157 52.632 0.00 0.00 33.68 2.75
2485 4206 1.363744 GTCAAAGGACGCTGGAGATG 58.636 55.000 0.00 0.00 33.68 2.90
2486 4207 0.976641 TCAAAGGACGCTGGAGATGT 59.023 50.000 0.00 0.00 0.00 3.06
2487 4208 1.066858 TCAAAGGACGCTGGAGATGTC 60.067 52.381 0.00 0.00 0.00 3.06
2497 4218 3.442996 GGAGATGTCCGTCTTGTGG 57.557 57.895 0.00 0.00 31.37 4.17
2498 4219 0.895530 GGAGATGTCCGTCTTGTGGA 59.104 55.000 0.00 0.00 31.37 4.02
2503 4224 3.466881 TCCGTCTTGTGGACAGGG 58.533 61.111 0.00 0.00 44.70 4.45
2504 4225 1.458777 TCCGTCTTGTGGACAGGGT 60.459 57.895 0.00 0.00 44.70 4.34
2505 4226 1.301716 CCGTCTTGTGGACAGGGTG 60.302 63.158 0.00 0.00 44.70 4.61
2506 4227 1.961277 CGTCTTGTGGACAGGGTGC 60.961 63.158 0.00 0.00 44.70 5.01
2507 4228 1.600916 GTCTTGTGGACAGGGTGCC 60.601 63.158 0.00 0.00 43.94 5.01
2508 4229 2.075566 TCTTGTGGACAGGGTGCCA 61.076 57.895 0.00 0.00 0.00 4.92
2509 4230 1.601759 CTTGTGGACAGGGTGCCAG 60.602 63.158 0.00 0.00 34.22 4.85
2510 4231 3.790416 TTGTGGACAGGGTGCCAGC 62.790 63.158 0.00 0.00 34.22 4.85
2528 4249 3.018973 GGCAGCGTGTTGTCGAAA 58.981 55.556 0.00 0.00 0.00 3.46
2529 4250 1.574428 GGCAGCGTGTTGTCGAAAT 59.426 52.632 0.00 0.00 0.00 2.17
2530 4251 0.452784 GGCAGCGTGTTGTCGAAATC 60.453 55.000 0.00 0.00 0.00 2.17
2531 4252 0.785708 GCAGCGTGTTGTCGAAATCG 60.786 55.000 0.00 0.00 41.45 3.34
2532 4253 0.506932 CAGCGTGTTGTCGAAATCGT 59.493 50.000 2.41 0.00 40.80 3.73
2533 4254 1.070843 CAGCGTGTTGTCGAAATCGTT 60.071 47.619 2.41 0.00 40.80 3.85
2534 4255 1.070843 AGCGTGTTGTCGAAATCGTTG 60.071 47.619 2.41 0.00 40.80 4.10
2535 4256 1.071107 GCGTGTTGTCGAAATCGTTGA 60.071 47.619 2.41 0.00 40.80 3.18
2536 4257 2.411031 GCGTGTTGTCGAAATCGTTGAT 60.411 45.455 2.41 0.00 40.80 2.57
2537 4258 3.145506 CGTGTTGTCGAAATCGTTGATG 58.854 45.455 2.41 0.00 40.80 3.07
2538 4259 3.121160 CGTGTTGTCGAAATCGTTGATGA 60.121 43.478 2.41 0.00 40.80 2.92
2539 4260 4.607336 CGTGTTGTCGAAATCGTTGATGAA 60.607 41.667 2.41 0.00 40.80 2.57
2540 4261 4.840772 GTGTTGTCGAAATCGTTGATGAAG 59.159 41.667 2.41 0.00 40.80 3.02
2541 4262 4.747605 TGTTGTCGAAATCGTTGATGAAGA 59.252 37.500 2.41 0.00 40.80 2.87
2542 4263 4.903638 TGTCGAAATCGTTGATGAAGAC 57.096 40.909 2.41 0.00 40.80 3.01
2543 4264 3.678072 TGTCGAAATCGTTGATGAAGACC 59.322 43.478 2.41 0.00 40.80 3.85
2544 4265 3.927142 GTCGAAATCGTTGATGAAGACCT 59.073 43.478 2.41 0.00 40.80 3.85
2545 4266 4.389077 GTCGAAATCGTTGATGAAGACCTT 59.611 41.667 2.41 0.00 40.80 3.50
2546 4267 5.575606 GTCGAAATCGTTGATGAAGACCTTA 59.424 40.000 2.41 0.00 40.80 2.69
2547 4268 5.805486 TCGAAATCGTTGATGAAGACCTTAG 59.195 40.000 2.41 0.00 40.80 2.18
2548 4269 5.577164 CGAAATCGTTGATGAAGACCTTAGT 59.423 40.000 0.00 0.00 34.11 2.24
2549 4270 6.454318 CGAAATCGTTGATGAAGACCTTAGTG 60.454 42.308 0.00 0.00 34.11 2.74
2550 4271 5.661056 ATCGTTGATGAAGACCTTAGTGA 57.339 39.130 0.00 0.00 0.00 3.41
2551 4272 5.661056 TCGTTGATGAAGACCTTAGTGAT 57.339 39.130 0.00 0.00 0.00 3.06
2552 4273 5.410924 TCGTTGATGAAGACCTTAGTGATG 58.589 41.667 0.00 0.00 0.00 3.07
2553 4274 5.185056 TCGTTGATGAAGACCTTAGTGATGA 59.815 40.000 0.00 0.00 0.00 2.92
2554 4275 5.869344 CGTTGATGAAGACCTTAGTGATGAA 59.131 40.000 0.00 0.00 0.00 2.57
2555 4276 6.035435 CGTTGATGAAGACCTTAGTGATGAAG 59.965 42.308 0.00 0.00 0.00 3.02
2556 4277 6.611613 TGATGAAGACCTTAGTGATGAAGT 57.388 37.500 0.00 0.00 0.00 3.01
2557 4278 7.718334 TGATGAAGACCTTAGTGATGAAGTA 57.282 36.000 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.373059 GATTCCTCGGCCCCATCTC 59.627 63.158 0.00 0.00 0.00 2.75
1 2 2.150051 GGATTCCTCGGCCCCATCT 61.150 63.158 0.00 0.00 0.00 2.90
2 3 2.432123 GGATTCCTCGGCCCCATC 59.568 66.667 0.00 0.00 0.00 3.51
3 4 3.560251 CGGATTCCTCGGCCCCAT 61.560 66.667 0.00 0.00 0.00 4.00
4 5 4.789173 TCGGATTCCTCGGCCCCA 62.789 66.667 0.00 0.00 0.00 4.96
5 6 3.930012 CTCGGATTCCTCGGCCCC 61.930 72.222 0.00 0.00 0.00 5.80
6 7 3.930012 CCTCGGATTCCTCGGCCC 61.930 72.222 0.00 0.00 0.00 5.80
7 8 2.210711 ATCCTCGGATTCCTCGGCC 61.211 63.158 0.30 0.00 0.00 6.13
8 9 1.005630 CATCCTCGGATTCCTCGGC 60.006 63.158 0.30 0.00 31.62 5.54
26 27 1.880027 CCGGCCAAGTATTTATCCTGC 59.120 52.381 2.24 0.00 0.00 4.85
30 31 0.872388 CGGCCGGCCAAGTATTTATC 59.128 55.000 42.78 13.54 35.37 1.75
59 60 0.248661 ATCTCACGTTGGCGATCGAG 60.249 55.000 21.57 4.44 42.00 4.04
63 64 0.246360 TGACATCTCACGTTGGCGAT 59.754 50.000 0.00 0.00 42.00 4.58
64 65 0.032815 TTGACATCTCACGTTGGCGA 59.967 50.000 0.00 0.00 42.00 5.54
65 66 1.078709 ATTGACATCTCACGTTGGCG 58.921 50.000 0.00 0.00 44.93 5.69
66 67 1.806542 ACATTGACATCTCACGTTGGC 59.193 47.619 0.00 0.00 0.00 4.52
68 69 4.934075 ATCACATTGACATCTCACGTTG 57.066 40.909 0.00 0.00 0.00 4.10
70 72 4.864806 GTGTATCACATTGACATCTCACGT 59.135 41.667 0.00 0.00 34.08 4.49
79 81 2.167693 TCTCCCGGTGTATCACATTGAC 59.832 50.000 0.00 0.00 35.86 3.18
83 85 2.365617 GTCATCTCCCGGTGTATCACAT 59.634 50.000 0.00 0.00 35.86 3.21
84 86 1.754803 GTCATCTCCCGGTGTATCACA 59.245 52.381 0.00 0.00 35.86 3.58
85 87 1.269102 CGTCATCTCCCGGTGTATCAC 60.269 57.143 0.00 0.00 0.00 3.06
86 88 1.029681 CGTCATCTCCCGGTGTATCA 58.970 55.000 0.00 0.00 0.00 2.15
93 95 1.141881 CAGGAACGTCATCTCCCGG 59.858 63.158 0.00 0.00 31.50 5.73
94 96 0.101399 CTCAGGAACGTCATCTCCCG 59.899 60.000 0.28 0.00 31.50 5.14
96 98 1.819288 TGACTCAGGAACGTCATCTCC 59.181 52.381 0.00 0.00 35.40 3.71
97 99 3.506810 CTTGACTCAGGAACGTCATCTC 58.493 50.000 0.00 0.00 39.63 2.75
98 100 2.353208 GCTTGACTCAGGAACGTCATCT 60.353 50.000 0.00 0.00 39.63 2.90
100 102 1.344438 TGCTTGACTCAGGAACGTCAT 59.656 47.619 0.00 0.00 39.63 3.06
101 103 0.750249 TGCTTGACTCAGGAACGTCA 59.250 50.000 0.00 0.00 38.30 4.35
103 105 0.464036 TGTGCTTGACTCAGGAACGT 59.536 50.000 0.00 0.00 0.00 3.99
110 131 1.693606 TGGACATCTGTGCTTGACTCA 59.306 47.619 3.48 0.00 37.28 3.41
120 141 2.297701 ACGCAAAAGTTGGACATCTGT 58.702 42.857 0.00 0.00 0.00 3.41
132 171 1.160137 CCTCCTCCTCAACGCAAAAG 58.840 55.000 0.00 0.00 0.00 2.27
165 225 4.678622 CCCACTTGTTGTTTACCTTGTTC 58.321 43.478 0.00 0.00 0.00 3.18
173 233 2.444010 AGGTAGGCCCACTTGTTGTTTA 59.556 45.455 0.00 0.00 34.66 2.01
174 234 1.216930 AGGTAGGCCCACTTGTTGTTT 59.783 47.619 0.00 0.00 34.66 2.83
175 235 0.850784 AGGTAGGCCCACTTGTTGTT 59.149 50.000 0.00 0.00 34.66 2.83
176 236 0.850784 AAGGTAGGCCCACTTGTTGT 59.149 50.000 0.00 0.00 34.66 3.32
178 238 3.745723 CAAGGTAGGCCCACTTGTT 57.254 52.632 18.56 1.93 37.43 2.83
181 241 1.145571 TCAACAAGGTAGGCCCACTT 58.854 50.000 0.00 0.00 34.66 3.16
182 242 1.372501 ATCAACAAGGTAGGCCCACT 58.627 50.000 0.00 0.00 34.66 4.00
184 244 2.025699 GGTTATCAACAAGGTAGGCCCA 60.026 50.000 0.00 0.00 34.66 5.36
185 245 2.651455 GGTTATCAACAAGGTAGGCCC 58.349 52.381 0.00 0.00 34.57 5.80
189 249 5.160607 TGTCAGGGTTATCAACAAGGTAG 57.839 43.478 0.00 0.00 0.00 3.18
204 264 2.673523 CAGAGGGCCTTGTCAGGG 59.326 66.667 7.89 0.00 41.21 4.45
220 280 2.324860 CGTCTCGTGTATGACAAAGCA 58.675 47.619 0.00 0.00 33.18 3.91
226 286 0.633733 CGTTGCGTCTCGTGTATGAC 59.366 55.000 0.00 0.00 0.00 3.06
283 343 4.759782 TCATCTTGAGAATTCCTCGGAAC 58.240 43.478 0.65 0.00 44.92 3.62
287 347 6.915544 TTTCATCATCTTGAGAATTCCTCG 57.084 37.500 0.65 0.00 44.92 4.63
384 453 1.902508 TGAGGAGGAGACATGTGGTTC 59.097 52.381 1.15 0.00 0.00 3.62
386 455 1.836166 CATGAGGAGGAGACATGTGGT 59.164 52.381 1.15 0.00 37.29 4.16
393 462 3.383185 CCTTGTAGTCATGAGGAGGAGAC 59.617 52.174 0.00 0.00 0.00 3.36
404 473 1.201647 CGTGGACGTCCTTGTAGTCAT 59.798 52.381 33.39 0.00 36.68 3.06
419 488 2.091541 GATGCCAAGGAATTTCGTGGA 58.908 47.619 21.63 7.89 38.32 4.02
420 489 2.094675 AGATGCCAAGGAATTTCGTGG 58.905 47.619 13.96 13.96 38.92 4.94
421 490 3.728864 CGAAGATGCCAAGGAATTTCGTG 60.729 47.826 12.40 0.00 33.38 4.35
590 1940 8.720562 GCTGCAACACCAGATTAAAATTAAAAT 58.279 29.630 0.00 0.00 34.77 1.82
592 1998 7.441017 AGCTGCAACACCAGATTAAAATTAAA 58.559 30.769 1.02 0.00 34.77 1.52
595 2001 5.473066 AGCTGCAACACCAGATTAAAATT 57.527 34.783 1.02 0.00 34.77 1.82
596 2002 5.476599 TGTAGCTGCAACACCAGATTAAAAT 59.523 36.000 0.43 0.00 34.77 1.82
598 2004 4.393834 TGTAGCTGCAACACCAGATTAAA 58.606 39.130 0.43 0.00 34.77 1.52
804 2294 1.382522 CAGTTAGCCTCGTACCGGTA 58.617 55.000 11.16 11.16 0.00 4.02
831 2321 7.327975 TGTACTTTACATACATCTTGGGTGAG 58.672 38.462 0.00 0.00 32.89 3.51
850 2340 4.042187 AGGAAGAAGATTGGCACTGTACTT 59.958 41.667 0.00 0.00 0.00 2.24
851 2341 3.584848 AGGAAGAAGATTGGCACTGTACT 59.415 43.478 0.00 0.00 0.00 2.73
852 2342 3.944087 AGGAAGAAGATTGGCACTGTAC 58.056 45.455 0.00 0.00 0.00 2.90
853 2343 5.663106 AGATAGGAAGAAGATTGGCACTGTA 59.337 40.000 0.00 0.00 0.00 2.74
854 2344 4.472833 AGATAGGAAGAAGATTGGCACTGT 59.527 41.667 0.00 0.00 0.00 3.55
902 2555 9.755804 ATCATCATAATCACTGTACTGTACTTG 57.244 33.333 17.98 14.42 0.00 3.16
913 2566 4.613850 GCAGCAGCATCATCATAATCACTG 60.614 45.833 0.00 0.00 41.58 3.66
915 2568 3.502595 AGCAGCAGCATCATCATAATCAC 59.497 43.478 3.17 0.00 45.49 3.06
917 2570 4.476862 CAAGCAGCAGCATCATCATAATC 58.523 43.478 3.17 0.00 45.49 1.75
918 2571 3.305403 GCAAGCAGCAGCATCATCATAAT 60.305 43.478 3.17 0.00 45.49 1.28
919 2572 2.034179 GCAAGCAGCAGCATCATCATAA 59.966 45.455 3.17 0.00 45.49 1.90
920 2573 1.607148 GCAAGCAGCAGCATCATCATA 59.393 47.619 3.17 0.00 45.49 2.15
921 2574 0.385751 GCAAGCAGCAGCATCATCAT 59.614 50.000 3.17 0.00 45.49 2.45
922 2575 1.807226 GCAAGCAGCAGCATCATCA 59.193 52.632 3.17 0.00 45.49 3.07
923 2576 4.711980 GCAAGCAGCAGCATCATC 57.288 55.556 3.17 0.00 45.49 2.92
951 2604 1.064621 CGGGCCGATCAAATGCAAG 59.935 57.895 24.41 0.00 0.00 4.01
1189 2842 2.310538 AGGCCACTTTCCTTTGACAAG 58.689 47.619 5.01 0.00 0.00 3.16
1248 2901 3.393278 ACTCAGTAGCCTCCTCTACTAGG 59.607 52.174 3.46 0.00 45.35 3.02
1249 2902 4.504340 GGACTCAGTAGCCTCCTCTACTAG 60.504 54.167 3.46 0.00 45.35 2.57
1265 2918 2.504920 TCCATAGGCGTGGACTCAG 58.495 57.895 10.10 0.00 43.20 3.35
1420 3073 0.041238 TGACCCTGTAGAGGAGTGGG 59.959 60.000 7.68 0.00 42.93 4.61
1458 3111 1.199789 CGCTTGCTTACTTGGCATTCA 59.800 47.619 0.00 0.00 39.54 2.57
1764 3437 5.048364 TCAAACCAGAATATTTCACCCAACG 60.048 40.000 0.00 0.00 0.00 4.10
1767 3440 8.837099 ATAATCAAACCAGAATATTTCACCCA 57.163 30.769 0.00 0.00 0.00 4.51
1802 3476 2.343387 GCATTTGTGTGGGCCACC 59.657 61.111 32.61 23.33 43.85 4.61
1810 3484 1.586154 GCTAGCCCGTGCATTTGTGT 61.586 55.000 2.29 0.00 41.13 3.72
1816 3490 0.758734 TCATAAGCTAGCCCGTGCAT 59.241 50.000 12.13 0.00 41.13 3.96
1820 3494 6.381420 ACAGAATATATCATAAGCTAGCCCGT 59.619 38.462 12.13 0.00 0.00 5.28
1868 3542 5.625921 TGCGGGTTAACTAAAACATAACC 57.374 39.130 5.42 5.56 45.04 2.85
1880 3554 2.180432 AGACTCCTTTGCGGGTTAAC 57.820 50.000 0.00 0.00 0.00 2.01
1909 3627 1.134670 GCTCCACTAAAGGATGCTCGT 60.135 52.381 0.00 0.00 36.99 4.18
1956 3674 8.336080 CCGCTAAATTTAGAAGATTGGTTAGAC 58.664 37.037 26.00 4.89 32.47 2.59
2048 3769 9.669887 ATGTTTGGATTTAATATGTGTGCAAAT 57.330 25.926 0.00 0.00 33.76 2.32
2063 3784 8.865090 TGTGTGAACCTTAATATGTTTGGATTT 58.135 29.630 1.96 0.00 0.00 2.17
2064 3785 8.303876 GTGTGTGAACCTTAATATGTTTGGATT 58.696 33.333 1.96 0.00 0.00 3.01
2065 3786 7.669722 AGTGTGTGAACCTTAATATGTTTGGAT 59.330 33.333 1.96 0.00 0.00 3.41
2066 3787 7.001674 AGTGTGTGAACCTTAATATGTTTGGA 58.998 34.615 1.96 0.00 0.00 3.53
2067 3788 7.214467 AGTGTGTGAACCTTAATATGTTTGG 57.786 36.000 0.00 0.00 0.00 3.28
2070 3791 9.344772 TGTAAAGTGTGTGAACCTTAATATGTT 57.655 29.630 0.00 0.00 0.00 2.71
2071 3792 8.780249 GTGTAAAGTGTGTGAACCTTAATATGT 58.220 33.333 0.00 0.00 0.00 2.29
2072 3793 8.999431 AGTGTAAAGTGTGTGAACCTTAATATG 58.001 33.333 0.00 0.00 0.00 1.78
2075 3796 9.216117 GATAGTGTAAAGTGTGTGAACCTTAAT 57.784 33.333 0.00 0.00 0.00 1.40
2076 3797 7.658575 GGATAGTGTAAAGTGTGTGAACCTTAA 59.341 37.037 0.00 0.00 0.00 1.85
2077 3798 7.156673 GGATAGTGTAAAGTGTGTGAACCTTA 58.843 38.462 0.00 0.00 0.00 2.69
2078 3799 5.995897 GGATAGTGTAAAGTGTGTGAACCTT 59.004 40.000 0.00 0.00 0.00 3.50
2079 3800 5.548406 GGATAGTGTAAAGTGTGTGAACCT 58.452 41.667 0.00 0.00 0.00 3.50
2080 3801 4.387862 CGGATAGTGTAAAGTGTGTGAACC 59.612 45.833 0.00 0.00 0.00 3.62
2081 3802 5.224888 TCGGATAGTGTAAAGTGTGTGAAC 58.775 41.667 0.00 0.00 0.00 3.18
2082 3803 5.456548 TCGGATAGTGTAAAGTGTGTGAA 57.543 39.130 0.00 0.00 0.00 3.18
2083 3804 5.184287 TGATCGGATAGTGTAAAGTGTGTGA 59.816 40.000 0.00 0.00 0.00 3.58
2084 3805 5.407502 TGATCGGATAGTGTAAAGTGTGTG 58.592 41.667 0.00 0.00 0.00 3.82
2085 3806 5.654603 TGATCGGATAGTGTAAAGTGTGT 57.345 39.130 0.00 0.00 0.00 3.72
2086 3807 6.042777 ACATGATCGGATAGTGTAAAGTGTG 58.957 40.000 0.00 0.00 0.00 3.82
2087 3808 6.222038 ACATGATCGGATAGTGTAAAGTGT 57.778 37.500 0.00 0.00 0.00 3.55
2088 3809 7.426410 ACTACATGATCGGATAGTGTAAAGTG 58.574 38.462 0.00 6.88 0.00 3.16
2089 3810 7.584122 ACTACATGATCGGATAGTGTAAAGT 57.416 36.000 0.00 9.17 0.00 2.66
2090 3811 8.784994 ACTACTACATGATCGGATAGTGTAAAG 58.215 37.037 0.00 13.91 0.00 1.85
2091 3812 8.687292 ACTACTACATGATCGGATAGTGTAAA 57.313 34.615 0.00 6.60 0.00 2.01
2092 3813 7.935210 TGACTACTACATGATCGGATAGTGTAA 59.065 37.037 0.00 3.21 0.00 2.41
2093 3814 7.447594 TGACTACTACATGATCGGATAGTGTA 58.552 38.462 0.00 11.92 0.00 2.90
2094 3815 6.296803 TGACTACTACATGATCGGATAGTGT 58.703 40.000 0.00 11.12 0.00 3.55
2095 3816 6.803154 TGACTACTACATGATCGGATAGTG 57.197 41.667 0.00 0.00 0.00 2.74
2096 3817 6.375736 CCATGACTACTACATGATCGGATAGT 59.624 42.308 0.00 0.00 45.22 2.12
2097 3818 6.375736 ACCATGACTACTACATGATCGGATAG 59.624 42.308 0.00 0.00 45.22 2.08
2098 3819 6.246163 ACCATGACTACTACATGATCGGATA 58.754 40.000 0.00 0.00 45.22 2.59
2099 3820 5.080337 ACCATGACTACTACATGATCGGAT 58.920 41.667 0.00 0.00 45.22 4.18
2100 3821 4.470602 ACCATGACTACTACATGATCGGA 58.529 43.478 0.00 0.00 45.22 4.55
2101 3822 4.799678 GACCATGACTACTACATGATCGG 58.200 47.826 0.00 0.00 45.22 4.18
2103 3824 5.453648 GTCGACCATGACTACTACATGATC 58.546 45.833 3.51 0.00 45.22 2.92
2104 3825 4.023963 CGTCGACCATGACTACTACATGAT 60.024 45.833 10.58 0.00 45.22 2.45
2105 3826 3.311596 CGTCGACCATGACTACTACATGA 59.688 47.826 10.58 0.00 45.22 3.07
2106 3827 3.548214 CCGTCGACCATGACTACTACATG 60.548 52.174 10.58 0.00 42.99 3.21
2107 3828 2.617308 CCGTCGACCATGACTACTACAT 59.383 50.000 10.58 0.00 36.71 2.29
2108 3829 2.011947 CCGTCGACCATGACTACTACA 58.988 52.381 10.58 0.00 36.71 2.74
2109 3830 2.012673 ACCGTCGACCATGACTACTAC 58.987 52.381 10.58 0.00 36.71 2.73
2110 3831 2.011947 CACCGTCGACCATGACTACTA 58.988 52.381 10.58 0.00 36.71 1.82
2111 3832 0.809385 CACCGTCGACCATGACTACT 59.191 55.000 10.58 0.00 36.71 2.57
2112 3833 0.524862 ACACCGTCGACCATGACTAC 59.475 55.000 17.98 0.00 36.71 2.73
2113 3834 2.011947 CTACACCGTCGACCATGACTA 58.988 52.381 17.98 3.24 36.71 2.59
2114 3835 0.809385 CTACACCGTCGACCATGACT 59.191 55.000 17.98 2.32 36.71 3.41
2115 3836 0.524862 ACTACACCGTCGACCATGAC 59.475 55.000 17.98 0.00 35.49 3.06
2116 3837 0.806868 GACTACACCGTCGACCATGA 59.193 55.000 17.98 4.04 0.00 3.07
2117 3838 3.324170 GACTACACCGTCGACCATG 57.676 57.895 10.58 10.95 0.00 3.66
2125 3846 1.134367 CATCCATGACGACTACACCGT 59.866 52.381 0.00 0.00 43.56 4.83
2126 3847 1.404035 TCATCCATGACGACTACACCG 59.596 52.381 0.00 0.00 0.00 4.94
2127 3848 3.068165 TCATCATCCATGACGACTACACC 59.932 47.826 0.00 0.00 40.03 4.16
2128 3849 4.307443 TCATCATCCATGACGACTACAC 57.693 45.455 0.00 0.00 40.03 2.90
2129 3850 4.737649 GCTTCATCATCCATGACGACTACA 60.738 45.833 0.00 0.00 41.56 2.74
2130 3851 3.738282 GCTTCATCATCCATGACGACTAC 59.262 47.826 0.00 0.00 41.56 2.73
2131 3852 3.243873 GGCTTCATCATCCATGACGACTA 60.244 47.826 0.00 0.00 41.56 2.59
2132 3853 2.484417 GGCTTCATCATCCATGACGACT 60.484 50.000 0.00 0.00 41.56 4.18
2133 3854 1.869767 GGCTTCATCATCCATGACGAC 59.130 52.381 0.00 0.00 41.56 4.34
2134 3855 1.538849 CGGCTTCATCATCCATGACGA 60.539 52.381 0.00 0.00 41.56 4.20
2135 3856 0.863799 CGGCTTCATCATCCATGACG 59.136 55.000 0.00 0.00 41.56 4.35
2136 3857 0.590195 GCGGCTTCATCATCCATGAC 59.410 55.000 0.00 0.00 41.56 3.06
2137 3858 0.180878 TGCGGCTTCATCATCCATGA 59.819 50.000 0.00 0.00 39.99 3.07
2138 3859 0.309922 GTGCGGCTTCATCATCCATG 59.690 55.000 0.00 0.00 0.00 3.66
2139 3860 0.107066 TGTGCGGCTTCATCATCCAT 60.107 50.000 0.00 0.00 0.00 3.41
2140 3861 0.322366 TTGTGCGGCTTCATCATCCA 60.322 50.000 0.00 0.00 0.00 3.41
2141 3862 0.810648 TTTGTGCGGCTTCATCATCC 59.189 50.000 0.00 0.00 0.00 3.51
2142 3863 1.796617 GCTTTGTGCGGCTTCATCATC 60.797 52.381 0.00 0.00 0.00 2.92
2143 3864 0.171903 GCTTTGTGCGGCTTCATCAT 59.828 50.000 0.00 0.00 0.00 2.45
2144 3865 1.580942 GCTTTGTGCGGCTTCATCA 59.419 52.632 0.00 0.00 0.00 3.07
2145 3866 4.465413 GCTTTGTGCGGCTTCATC 57.535 55.556 0.00 0.00 0.00 2.92
2154 3875 2.399396 TTACGCTTTCAGCTTTGTGC 57.601 45.000 0.00 0.00 39.60 4.57
2173 3894 8.941977 TGTCATCTACAACATAGCGTAATTTTT 58.058 29.630 0.00 0.00 34.29 1.94
2174 3895 8.487313 TGTCATCTACAACATAGCGTAATTTT 57.513 30.769 0.00 0.00 34.29 1.82
2175 3896 8.487313 TTGTCATCTACAACATAGCGTAATTT 57.513 30.769 0.00 0.00 43.22 1.82
2188 3909 3.253188 GGCTGCAACTTTGTCATCTACAA 59.747 43.478 0.50 0.00 46.41 2.41
2189 3910 2.813754 GGCTGCAACTTTGTCATCTACA 59.186 45.455 0.50 0.00 35.88 2.74
2190 3911 2.159653 CGGCTGCAACTTTGTCATCTAC 60.160 50.000 0.50 0.00 0.00 2.59
2191 3912 2.076100 CGGCTGCAACTTTGTCATCTA 58.924 47.619 0.50 0.00 0.00 1.98
2192 3913 0.877071 CGGCTGCAACTTTGTCATCT 59.123 50.000 0.50 0.00 0.00 2.90
2193 3914 0.593128 ACGGCTGCAACTTTGTCATC 59.407 50.000 0.50 0.00 0.00 2.92
2194 3915 0.311790 CACGGCTGCAACTTTGTCAT 59.688 50.000 0.50 0.00 0.00 3.06
2195 3916 1.723608 CCACGGCTGCAACTTTGTCA 61.724 55.000 0.50 0.00 0.00 3.58
2196 3917 1.008538 CCACGGCTGCAACTTTGTC 60.009 57.895 0.50 0.00 0.00 3.18
2197 3918 0.823356 ATCCACGGCTGCAACTTTGT 60.823 50.000 0.50 0.00 0.00 2.83
2198 3919 0.387622 CATCCACGGCTGCAACTTTG 60.388 55.000 0.50 0.00 0.00 2.77
2199 3920 0.537143 TCATCCACGGCTGCAACTTT 60.537 50.000 0.50 0.00 0.00 2.66
2200 3921 1.073025 TCATCCACGGCTGCAACTT 59.927 52.632 0.50 0.00 0.00 2.66
2201 3922 1.672356 GTCATCCACGGCTGCAACT 60.672 57.895 0.50 0.00 0.00 3.16
2202 3923 2.870372 GTCATCCACGGCTGCAAC 59.130 61.111 0.50 0.00 0.00 4.17
2203 3924 2.741985 CGTCATCCACGGCTGCAA 60.742 61.111 0.50 0.00 45.46 4.08
2211 3932 2.870372 GCAAGGTGCGTCATCCAC 59.130 61.111 0.00 0.00 31.71 4.02
2222 3943 0.617413 CCCTCTGACATCTGCAAGGT 59.383 55.000 0.00 0.00 0.00 3.50
2223 3944 0.617413 ACCCTCTGACATCTGCAAGG 59.383 55.000 0.00 0.00 0.00 3.61
2224 3945 1.002888 ACACCCTCTGACATCTGCAAG 59.997 52.381 0.00 0.00 0.00 4.01
2225 3946 1.002430 GACACCCTCTGACATCTGCAA 59.998 52.381 0.00 0.00 0.00 4.08
2226 3947 0.610174 GACACCCTCTGACATCTGCA 59.390 55.000 0.00 0.00 0.00 4.41
2227 3948 0.610174 TGACACCCTCTGACATCTGC 59.390 55.000 0.00 0.00 0.00 4.26
2228 3949 2.480932 CGATGACACCCTCTGACATCTG 60.481 54.545 0.00 0.00 44.94 2.90
2229 3950 1.753649 CGATGACACCCTCTGACATCT 59.246 52.381 0.00 0.00 44.94 2.90
2230 3951 1.202463 CCGATGACACCCTCTGACATC 60.202 57.143 0.00 0.00 44.17 3.06
2231 3952 0.826715 CCGATGACACCCTCTGACAT 59.173 55.000 0.00 0.00 37.89 3.06
2232 3953 1.888436 GCCGATGACACCCTCTGACA 61.888 60.000 0.00 0.00 0.00 3.58
2233 3954 1.153549 GCCGATGACACCCTCTGAC 60.154 63.158 0.00 0.00 0.00 3.51
2234 3955 2.710902 CGCCGATGACACCCTCTGA 61.711 63.158 0.00 0.00 0.00 3.27
2235 3956 2.021068 ATCGCCGATGACACCCTCTG 62.021 60.000 0.00 0.00 0.00 3.35
2236 3957 1.758514 ATCGCCGATGACACCCTCT 60.759 57.895 0.00 0.00 0.00 3.69
2237 3958 1.592669 CATCGCCGATGACACCCTC 60.593 63.158 22.11 0.00 42.09 4.30
2238 3959 2.021068 CTCATCGCCGATGACACCCT 62.021 60.000 24.84 0.00 43.11 4.34
2239 3960 1.592669 CTCATCGCCGATGACACCC 60.593 63.158 24.84 0.00 43.11 4.61
2240 3961 0.872021 GACTCATCGCCGATGACACC 60.872 60.000 24.84 13.01 43.11 4.16
2241 3962 0.872021 GGACTCATCGCCGATGACAC 60.872 60.000 24.84 19.47 43.11 3.67
2242 3963 1.319614 TGGACTCATCGCCGATGACA 61.320 55.000 24.84 18.34 43.11 3.58
2243 3964 0.872021 GTGGACTCATCGCCGATGAC 60.872 60.000 24.84 16.14 43.11 3.06
2244 3965 1.437573 GTGGACTCATCGCCGATGA 59.562 57.895 26.50 26.50 45.35 2.92
2245 3966 1.592669 GGTGGACTCATCGCCGATG 60.593 63.158 20.70 20.70 41.00 3.84
2246 3967 2.815308 GGTGGACTCATCGCCGAT 59.185 61.111 0.00 0.00 0.00 4.18
2252 3973 2.151202 TGAAAAAGCGGTGGACTCATC 58.849 47.619 0.00 0.00 0.00 2.92
2253 3974 2.154462 CTGAAAAAGCGGTGGACTCAT 58.846 47.619 0.00 0.00 0.00 2.90
2254 3975 1.593196 CTGAAAAAGCGGTGGACTCA 58.407 50.000 0.00 0.00 0.00 3.41
2255 3976 0.875059 CCTGAAAAAGCGGTGGACTC 59.125 55.000 0.00 0.00 0.00 3.36
2256 3977 0.472471 TCCTGAAAAAGCGGTGGACT 59.528 50.000 0.00 0.00 0.00 3.85
2257 3978 0.591659 GTCCTGAAAAAGCGGTGGAC 59.408 55.000 4.10 4.10 37.42 4.02
2258 3979 0.536460 GGTCCTGAAAAAGCGGTGGA 60.536 55.000 0.00 0.00 0.00 4.02
2259 3980 1.852067 CGGTCCTGAAAAAGCGGTGG 61.852 60.000 0.00 0.00 33.05 4.61
2260 3981 1.574428 CGGTCCTGAAAAAGCGGTG 59.426 57.895 0.00 0.00 33.05 4.94
2261 3982 4.058797 CGGTCCTGAAAAAGCGGT 57.941 55.556 0.00 0.00 33.05 5.68
2263 3984 1.298859 CCTCCGGTCCTGAAAAAGCG 61.299 60.000 0.00 0.00 36.23 4.68
2264 3985 0.036306 TCCTCCGGTCCTGAAAAAGC 59.964 55.000 0.00 0.00 0.00 3.51
2265 3986 1.071699 TGTCCTCCGGTCCTGAAAAAG 59.928 52.381 0.00 0.00 0.00 2.27
2266 3987 1.133363 TGTCCTCCGGTCCTGAAAAA 58.867 50.000 0.00 0.00 0.00 1.94
2267 3988 0.395312 GTGTCCTCCGGTCCTGAAAA 59.605 55.000 0.00 0.00 0.00 2.29
2268 3989 1.477685 GGTGTCCTCCGGTCCTGAAA 61.478 60.000 0.00 0.00 0.00 2.69
2269 3990 1.911766 GGTGTCCTCCGGTCCTGAA 60.912 63.158 0.00 0.00 0.00 3.02
2270 3991 2.283676 GGTGTCCTCCGGTCCTGA 60.284 66.667 0.00 0.00 0.00 3.86
2271 3992 3.391382 GGGTGTCCTCCGGTCCTG 61.391 72.222 0.00 0.00 0.00 3.86
2272 3993 3.254035 ATGGGTGTCCTCCGGTCCT 62.254 63.158 0.00 0.00 0.00 3.85
2273 3994 2.687566 ATGGGTGTCCTCCGGTCC 60.688 66.667 0.00 0.00 0.00 4.46
2274 3995 2.901042 GATGGGTGTCCTCCGGTC 59.099 66.667 0.00 0.00 0.00 4.79
2275 3996 3.075005 CGATGGGTGTCCTCCGGT 61.075 66.667 0.00 0.00 0.00 5.28
2276 3997 3.849951 CCGATGGGTGTCCTCCGG 61.850 72.222 0.00 0.00 40.26 5.14
2277 3998 3.849951 CCCGATGGGTGTCCTCCG 61.850 72.222 0.00 0.00 38.25 4.63
2287 4008 2.044053 AATGTGTGCCCCCGATGG 60.044 61.111 0.00 0.00 0.00 3.51
2288 4009 2.417257 CCAATGTGTGCCCCCGATG 61.417 63.158 0.00 0.00 0.00 3.84
2289 4010 2.044053 CCAATGTGTGCCCCCGAT 60.044 61.111 0.00 0.00 0.00 4.18
2290 4011 2.648613 AAACCAATGTGTGCCCCCGA 62.649 55.000 0.00 0.00 0.00 5.14
2291 4012 1.753368 AAAACCAATGTGTGCCCCCG 61.753 55.000 0.00 0.00 0.00 5.73
2292 4013 0.250252 CAAAACCAATGTGTGCCCCC 60.250 55.000 0.00 0.00 0.00 5.40
2293 4014 0.884259 GCAAAACCAATGTGTGCCCC 60.884 55.000 0.00 0.00 32.70 5.80
2294 4015 0.884259 GGCAAAACCAATGTGTGCCC 60.884 55.000 1.45 0.00 44.84 5.36
2295 4016 2.615774 GGCAAAACCAATGTGTGCC 58.384 52.632 0.00 0.00 44.57 5.01
2305 4026 1.566404 CAAACGGTCTTGGCAAAACC 58.434 50.000 12.83 12.83 39.84 3.27
2306 4027 1.566404 CCAAACGGTCTTGGCAAAAC 58.434 50.000 0.00 0.00 39.55 2.43
2313 4034 1.440938 TTCACGGCCAAACGGTCTTG 61.441 55.000 2.24 0.00 38.39 3.02
2314 4035 0.748729 TTTCACGGCCAAACGGTCTT 60.749 50.000 2.24 0.00 38.39 3.01
2315 4036 1.153127 TTTCACGGCCAAACGGTCT 60.153 52.632 2.24 0.00 38.39 3.85
2316 4037 1.281656 CTTTCACGGCCAAACGGTC 59.718 57.895 2.24 0.00 38.39 4.79
2317 4038 2.190841 CCTTTCACGGCCAAACGGT 61.191 57.895 2.24 0.00 38.39 4.83
2318 4039 2.642700 CCTTTCACGGCCAAACGG 59.357 61.111 2.24 0.00 38.39 4.44
2319 4040 2.642700 CCCTTTCACGGCCAAACG 59.357 61.111 2.24 0.00 40.31 3.60
2320 4041 3.047735 CCCCTTTCACGGCCAAAC 58.952 61.111 2.24 0.00 0.00 2.93
2321 4042 2.915137 GCCCCTTTCACGGCCAAA 60.915 61.111 2.24 0.00 39.39 3.28
2325 4046 3.140814 GATGGCCCCTTTCACGGC 61.141 66.667 0.00 0.00 44.92 5.68
2326 4047 1.750399 CTGATGGCCCCTTTCACGG 60.750 63.158 0.00 0.00 0.00 4.94
2327 4048 0.251916 TACTGATGGCCCCTTTCACG 59.748 55.000 0.00 0.00 0.00 4.35
2328 4049 2.507407 TTACTGATGGCCCCTTTCAC 57.493 50.000 0.00 0.00 0.00 3.18
2329 4050 2.378547 ACTTTACTGATGGCCCCTTTCA 59.621 45.455 0.00 0.00 0.00 2.69
2330 4051 3.087370 ACTTTACTGATGGCCCCTTTC 57.913 47.619 0.00 0.00 0.00 2.62
2331 4052 3.542969 AACTTTACTGATGGCCCCTTT 57.457 42.857 0.00 0.00 0.00 3.11
2332 4053 3.332485 TGTAACTTTACTGATGGCCCCTT 59.668 43.478 0.00 0.00 34.77 3.95
2333 4054 2.916934 TGTAACTTTACTGATGGCCCCT 59.083 45.455 0.00 0.00 34.77 4.79
2334 4055 3.359695 TGTAACTTTACTGATGGCCCC 57.640 47.619 0.00 0.00 34.77 5.80
2335 4056 3.126343 CGTTGTAACTTTACTGATGGCCC 59.874 47.826 0.00 0.00 34.77 5.80
2336 4057 3.749609 ACGTTGTAACTTTACTGATGGCC 59.250 43.478 0.00 0.00 34.77 5.36
2337 4058 4.212636 ACACGTTGTAACTTTACTGATGGC 59.787 41.667 1.04 0.00 34.77 4.40
2338 4059 5.388061 CGACACGTTGTAACTTTACTGATGG 60.388 44.000 1.04 0.00 34.77 3.51
2339 4060 5.400188 TCGACACGTTGTAACTTTACTGATG 59.600 40.000 1.04 0.00 34.77 3.07
2340 4061 5.522456 TCGACACGTTGTAACTTTACTGAT 58.478 37.500 1.04 0.00 34.77 2.90
2341 4062 4.919206 TCGACACGTTGTAACTTTACTGA 58.081 39.130 1.04 0.00 34.77 3.41
2342 4063 5.595993 CATCGACACGTTGTAACTTTACTG 58.404 41.667 0.00 0.00 34.77 2.74
2343 4064 4.149396 GCATCGACACGTTGTAACTTTACT 59.851 41.667 0.00 0.00 34.77 2.24
2344 4065 4.084952 TGCATCGACACGTTGTAACTTTAC 60.085 41.667 0.00 0.00 0.00 2.01
2345 4066 4.049869 TGCATCGACACGTTGTAACTTTA 58.950 39.130 0.00 0.00 0.00 1.85
2346 4067 2.867368 TGCATCGACACGTTGTAACTTT 59.133 40.909 0.00 0.00 0.00 2.66
2347 4068 2.475111 CTGCATCGACACGTTGTAACTT 59.525 45.455 0.00 0.00 0.00 2.66
2348 4069 2.058798 CTGCATCGACACGTTGTAACT 58.941 47.619 0.00 0.00 0.00 2.24
2349 4070 1.790623 ACTGCATCGACACGTTGTAAC 59.209 47.619 0.00 0.00 0.00 2.50
2350 4071 2.055838 GACTGCATCGACACGTTGTAA 58.944 47.619 0.00 0.00 0.00 2.41
2351 4072 1.001158 TGACTGCATCGACACGTTGTA 60.001 47.619 0.00 0.00 0.00 2.41
2352 4073 0.249280 TGACTGCATCGACACGTTGT 60.249 50.000 0.00 0.00 0.00 3.32
2353 4074 1.070821 ATGACTGCATCGACACGTTG 58.929 50.000 0.00 0.00 0.00 4.10
2354 4075 1.070821 CATGACTGCATCGACACGTT 58.929 50.000 0.00 0.00 30.68 3.99
2355 4076 0.243636 TCATGACTGCATCGACACGT 59.756 50.000 0.00 0.00 30.68 4.49
2356 4077 0.642291 GTCATGACTGCATCGACACG 59.358 55.000 18.83 0.00 35.01 4.49
2357 4078 0.642291 CGTCATGACTGCATCGACAC 59.358 55.000 22.95 0.00 34.79 3.67
2358 4079 0.243636 ACGTCATGACTGCATCGACA 59.756 50.000 22.95 0.00 34.79 4.35
2359 4080 0.917259 GACGTCATGACTGCATCGAC 59.083 55.000 22.95 6.12 33.28 4.20
2360 4081 0.523335 CGACGTCATGACTGCATCGA 60.523 55.000 22.95 0.00 30.68 3.59
2361 4082 0.798389 ACGACGTCATGACTGCATCG 60.798 55.000 22.95 24.00 30.68 3.84
2362 4083 2.112522 CTACGACGTCATGACTGCATC 58.887 52.381 22.95 13.54 30.68 3.91
2363 4084 1.799181 GCTACGACGTCATGACTGCAT 60.799 52.381 22.95 9.14 34.29 3.96
2364 4085 0.456142 GCTACGACGTCATGACTGCA 60.456 55.000 22.95 3.68 0.00 4.41
2365 4086 0.179161 AGCTACGACGTCATGACTGC 60.179 55.000 22.95 15.62 0.00 4.40
2366 4087 1.130561 TCAGCTACGACGTCATGACTG 59.869 52.381 22.95 17.83 0.00 3.51
2367 4088 1.398739 CTCAGCTACGACGTCATGACT 59.601 52.381 22.95 10.54 0.00 3.41
2368 4089 1.532090 CCTCAGCTACGACGTCATGAC 60.532 57.143 16.21 16.21 0.00 3.06
2369 4090 0.733150 CCTCAGCTACGACGTCATGA 59.267 55.000 17.16 6.65 0.00 3.07
2370 4091 0.867753 GCCTCAGCTACGACGTCATG 60.868 60.000 17.16 2.29 35.50 3.07
2371 4092 1.433879 GCCTCAGCTACGACGTCAT 59.566 57.895 17.16 1.85 35.50 3.06
2372 4093 2.875485 GCCTCAGCTACGACGTCA 59.125 61.111 17.16 0.00 35.50 4.35
2373 4094 2.277373 CGCCTCAGCTACGACGTC 60.277 66.667 2.43 5.18 36.60 4.34
2374 4095 3.812019 CCGCCTCAGCTACGACGT 61.812 66.667 5.52 5.52 36.60 4.34
2375 4096 3.506096 TCCGCCTCAGCTACGACG 61.506 66.667 0.00 0.00 36.60 5.12
2376 4097 2.102553 GTCCGCCTCAGCTACGAC 59.897 66.667 0.00 0.00 36.60 4.34
2377 4098 1.320344 ATTGTCCGCCTCAGCTACGA 61.320 55.000 0.00 0.00 36.60 3.43
2378 4099 1.141881 ATTGTCCGCCTCAGCTACG 59.858 57.895 0.00 0.00 36.60 3.51
2379 4100 0.108138 ACATTGTCCGCCTCAGCTAC 60.108 55.000 0.00 0.00 36.60 3.58
2380 4101 0.613260 AACATTGTCCGCCTCAGCTA 59.387 50.000 0.00 0.00 36.60 3.32
2381 4102 0.957395 CAACATTGTCCGCCTCAGCT 60.957 55.000 0.00 0.00 36.60 4.24
2382 4103 1.237285 ACAACATTGTCCGCCTCAGC 61.237 55.000 0.00 0.00 36.50 4.26
2383 4104 2.932663 ACAACATTGTCCGCCTCAG 58.067 52.632 0.00 0.00 36.50 3.35
2392 4113 5.053811 TCTACAACGACATGACAACATTGT 58.946 37.500 0.00 0.00 45.65 2.71
2393 4114 5.590104 TCTACAACGACATGACAACATTG 57.410 39.130 0.00 0.00 34.15 2.82
2394 4115 5.931724 TCATCTACAACGACATGACAACATT 59.068 36.000 0.00 0.00 34.15 2.71
2395 4116 5.348724 GTCATCTACAACGACATGACAACAT 59.651 40.000 0.00 0.00 43.13 2.71
2396 4117 4.684242 GTCATCTACAACGACATGACAACA 59.316 41.667 0.00 0.00 43.13 3.33
2397 4118 4.201494 CGTCATCTACAACGACATGACAAC 60.201 45.833 0.00 0.00 43.60 3.32
2398 4119 3.917985 CGTCATCTACAACGACATGACAA 59.082 43.478 0.00 0.00 43.60 3.18
2399 4120 3.057806 ACGTCATCTACAACGACATGACA 60.058 43.478 0.00 0.00 43.60 3.58
2400 4121 3.300853 CACGTCATCTACAACGACATGAC 59.699 47.826 0.00 0.00 41.29 3.06
2401 4122 3.498082 CACGTCATCTACAACGACATGA 58.502 45.455 0.00 0.00 41.29 3.07
2402 4123 2.598637 CCACGTCATCTACAACGACATG 59.401 50.000 1.52 0.00 41.29 3.21
2403 4124 2.230508 ACCACGTCATCTACAACGACAT 59.769 45.455 1.52 0.00 41.29 3.06
2404 4125 1.610038 ACCACGTCATCTACAACGACA 59.390 47.619 1.52 0.00 41.29 4.35
2405 4126 2.248487 GACCACGTCATCTACAACGAC 58.752 52.381 1.52 0.00 41.29 4.34
2406 4127 1.135888 CGACCACGTCATCTACAACGA 60.136 52.381 1.52 0.00 41.29 3.85
2407 4128 1.135888 TCGACCACGTCATCTACAACG 60.136 52.381 0.00 0.00 44.22 4.10
2408 4129 2.624316 TCGACCACGTCATCTACAAC 57.376 50.000 0.00 0.00 40.69 3.32
2409 4130 2.734175 GCATCGACCACGTCATCTACAA 60.734 50.000 0.00 0.00 40.69 2.41
2410 4131 1.202256 GCATCGACCACGTCATCTACA 60.202 52.381 0.00 0.00 40.69 2.74
2411 4132 1.478137 GCATCGACCACGTCATCTAC 58.522 55.000 0.00 0.00 40.69 2.59
2412 4133 0.384309 GGCATCGACCACGTCATCTA 59.616 55.000 0.00 0.00 40.69 1.98
2413 4134 1.141881 GGCATCGACCACGTCATCT 59.858 57.895 0.00 0.00 40.69 2.90
2414 4135 1.153647 TGGCATCGACCACGTCATC 60.154 57.895 0.00 0.00 40.69 2.92
2415 4136 2.978000 TGGCATCGACCACGTCAT 59.022 55.556 0.00 0.00 40.69 3.06
2421 4142 4.429212 CGACGGTGGCATCGACCA 62.429 66.667 29.09 0.00 40.86 4.02
2422 4143 4.124351 TCGACGGTGGCATCGACC 62.124 66.667 29.09 16.42 42.18 4.79
2423 4144 2.337749 ATCTCGACGGTGGCATCGAC 62.338 60.000 29.09 20.39 42.18 4.20
2424 4145 2.060004 GATCTCGACGGTGGCATCGA 62.060 60.000 29.09 18.87 44.68 3.59
2425 4146 1.658717 GATCTCGACGGTGGCATCG 60.659 63.158 20.23 20.23 39.72 3.84
2426 4147 1.658717 CGATCTCGACGGTGGCATC 60.659 63.158 0.00 0.00 43.02 3.91
2427 4148 2.413351 CGATCTCGACGGTGGCAT 59.587 61.111 0.00 0.00 43.02 4.40
2428 4149 4.492160 GCGATCTCGACGGTGGCA 62.492 66.667 3.33 0.00 43.02 4.92
2430 4151 2.816360 TACGCGATCTCGACGGTGG 61.816 63.158 15.93 0.00 43.02 4.61
2431 4152 1.650536 GTACGCGATCTCGACGGTG 60.651 63.158 15.93 0.00 43.02 4.94
2432 4153 2.705826 GTACGCGATCTCGACGGT 59.294 61.111 15.93 8.30 43.02 4.83
2433 4154 2.423198 CGTACGCGATCTCGACGG 60.423 66.667 15.93 0.00 43.02 4.79
2434 4155 1.713698 GACGTACGCGATCTCGACG 60.714 63.158 15.93 20.42 43.02 5.12
2435 4156 0.026027 AAGACGTACGCGATCTCGAC 59.974 55.000 15.93 11.67 43.02 4.20
2436 4157 0.025898 CAAGACGTACGCGATCTCGA 59.974 55.000 15.93 0.00 43.02 4.04
2437 4158 0.247576 ACAAGACGTACGCGATCTCG 60.248 55.000 15.93 13.88 42.00 4.04
2438 4159 1.201998 TGACAAGACGTACGCGATCTC 60.202 52.381 15.93 4.83 42.00 2.75
2439 4160 0.800631 TGACAAGACGTACGCGATCT 59.199 50.000 15.93 8.20 42.00 2.75
2440 4161 1.823828 ATGACAAGACGTACGCGATC 58.176 50.000 15.93 5.65 42.00 3.69
2441 4162 2.273370 AATGACAAGACGTACGCGAT 57.727 45.000 15.93 0.00 42.00 4.58
2442 4163 2.898181 TAATGACAAGACGTACGCGA 57.102 45.000 15.93 0.00 42.00 5.87
2443 4164 4.144221 CAGTATAATGACAAGACGTACGCG 59.856 45.833 16.72 3.53 44.93 6.01
2444 4165 5.032863 ACAGTATAATGACAAGACGTACGC 58.967 41.667 16.72 8.42 0.00 4.42
2445 4166 6.253013 TGACAGTATAATGACAAGACGTACG 58.747 40.000 15.01 15.01 0.00 3.67
2446 4167 8.456904 TTTGACAGTATAATGACAAGACGTAC 57.543 34.615 15.40 0.00 36.48 3.67
2447 4168 7.758076 CCTTTGACAGTATAATGACAAGACGTA 59.242 37.037 15.40 3.34 36.48 3.57
2448 4169 6.590292 CCTTTGACAGTATAATGACAAGACGT 59.410 38.462 15.40 0.00 36.48 4.34
2449 4170 6.811665 TCCTTTGACAGTATAATGACAAGACG 59.188 38.462 15.40 9.78 36.48 4.18
2450 4171 7.201444 CGTCCTTTGACAGTATAATGACAAGAC 60.201 40.741 18.49 18.49 41.85 3.01
2451 4172 6.811665 CGTCCTTTGACAGTATAATGACAAGA 59.188 38.462 15.40 9.60 41.85 3.02
2452 4173 6.455646 GCGTCCTTTGACAGTATAATGACAAG 60.456 42.308 15.40 10.92 41.85 3.16
2453 4174 5.350365 GCGTCCTTTGACAGTATAATGACAA 59.650 40.000 12.75 12.75 41.85 3.18
2454 4175 4.868171 GCGTCCTTTGACAGTATAATGACA 59.132 41.667 7.27 4.06 41.85 3.58
2455 4176 5.005779 CAGCGTCCTTTGACAGTATAATGAC 59.994 44.000 7.27 1.04 41.85 3.06
2456 4177 5.109210 CAGCGTCCTTTGACAGTATAATGA 58.891 41.667 7.27 0.00 41.85 2.57
2457 4178 4.271049 CCAGCGTCCTTTGACAGTATAATG 59.729 45.833 0.00 0.00 41.85 1.90
2458 4179 4.161565 TCCAGCGTCCTTTGACAGTATAAT 59.838 41.667 0.00 0.00 41.85 1.28
2459 4180 3.512329 TCCAGCGTCCTTTGACAGTATAA 59.488 43.478 0.00 0.00 41.85 0.98
2460 4181 3.093814 TCCAGCGTCCTTTGACAGTATA 58.906 45.455 0.00 0.00 41.85 1.47
2461 4182 1.899814 TCCAGCGTCCTTTGACAGTAT 59.100 47.619 0.00 0.00 41.85 2.12
2462 4183 1.272490 CTCCAGCGTCCTTTGACAGTA 59.728 52.381 0.00 0.00 41.85 2.74
2463 4184 0.034059 CTCCAGCGTCCTTTGACAGT 59.966 55.000 0.00 0.00 41.85 3.55
2464 4185 0.318441 TCTCCAGCGTCCTTTGACAG 59.682 55.000 0.00 0.00 41.85 3.51
2465 4186 0.976641 ATCTCCAGCGTCCTTTGACA 59.023 50.000 0.00 0.00 41.85 3.58
2466 4187 1.338200 ACATCTCCAGCGTCCTTTGAC 60.338 52.381 0.00 0.00 38.18 3.18
2467 4188 0.976641 ACATCTCCAGCGTCCTTTGA 59.023 50.000 0.00 0.00 0.00 2.69
2468 4189 1.363744 GACATCTCCAGCGTCCTTTG 58.636 55.000 0.00 0.00 0.00 2.77
2469 4190 0.250513 GGACATCTCCAGCGTCCTTT 59.749 55.000 0.00 0.00 44.82 3.11
2470 4191 1.901085 GGACATCTCCAGCGTCCTT 59.099 57.895 0.00 0.00 44.82 3.36
2471 4192 2.418910 CGGACATCTCCAGCGTCCT 61.419 63.158 6.27 0.00 45.83 3.85
2472 4193 2.105128 CGGACATCTCCAGCGTCC 59.895 66.667 0.00 0.00 44.79 4.79
2473 4194 1.226717 GACGGACATCTCCAGCGTC 60.227 63.158 0.00 0.00 36.12 5.19
2474 4195 1.251527 AAGACGGACATCTCCAGCGT 61.252 55.000 0.00 0.00 36.12 5.07
2475 4196 0.803768 CAAGACGGACATCTCCAGCG 60.804 60.000 0.00 0.00 36.12 5.18
2476 4197 0.247736 ACAAGACGGACATCTCCAGC 59.752 55.000 0.00 0.00 36.12 4.85
2477 4198 1.404717 CCACAAGACGGACATCTCCAG 60.405 57.143 0.00 0.00 36.12 3.86
2478 4199 0.608130 CCACAAGACGGACATCTCCA 59.392 55.000 0.00 0.00 36.12 3.86
2479 4200 0.895530 TCCACAAGACGGACATCTCC 59.104 55.000 0.00 0.00 0.00 3.71
2489 4210 1.600916 GGCACCCTGTCCACAAGAC 60.601 63.158 0.00 0.00 46.51 3.01
2490 4211 2.055689 CTGGCACCCTGTCCACAAGA 62.056 60.000 0.00 0.00 0.00 3.02
2491 4212 1.601759 CTGGCACCCTGTCCACAAG 60.602 63.158 0.00 0.00 0.00 3.16
2492 4213 2.515398 CTGGCACCCTGTCCACAA 59.485 61.111 0.00 0.00 0.00 3.33
2493 4214 4.269523 GCTGGCACCCTGTCCACA 62.270 66.667 0.00 0.00 0.00 4.17
2507 4228 4.374702 GACAACACGCTGCCGCTG 62.375 66.667 0.00 0.00 38.22 5.18
2510 4231 2.170260 ATTTCGACAACACGCTGCCG 62.170 55.000 0.00 0.00 41.14 5.69
2511 4232 0.452784 GATTTCGACAACACGCTGCC 60.453 55.000 0.00 0.00 0.00 4.85
2512 4233 0.785708 CGATTTCGACAACACGCTGC 60.786 55.000 0.00 0.00 43.02 5.25
2513 4234 0.506932 ACGATTTCGACAACACGCTG 59.493 50.000 7.01 0.00 43.02 5.18
2514 4235 1.070843 CAACGATTTCGACAACACGCT 60.071 47.619 7.01 0.00 43.02 5.07
2515 4236 1.071107 TCAACGATTTCGACAACACGC 60.071 47.619 7.01 0.00 43.02 5.34
2516 4237 2.914816 TCAACGATTTCGACAACACG 57.085 45.000 7.01 0.00 43.02 4.49
2517 4238 4.383774 TCATCAACGATTTCGACAACAC 57.616 40.909 7.01 0.00 43.02 3.32
2518 4239 4.747605 TCTTCATCAACGATTTCGACAACA 59.252 37.500 7.01 0.00 43.02 3.33
2519 4240 5.073478 GTCTTCATCAACGATTTCGACAAC 58.927 41.667 7.01 0.00 43.02 3.32
2520 4241 4.151689 GGTCTTCATCAACGATTTCGACAA 59.848 41.667 7.01 0.00 43.02 3.18
2521 4242 3.678072 GGTCTTCATCAACGATTTCGACA 59.322 43.478 7.01 0.00 43.02 4.35
2522 4243 3.927142 AGGTCTTCATCAACGATTTCGAC 59.073 43.478 7.01 0.00 43.02 4.20
2523 4244 4.188247 AGGTCTTCATCAACGATTTCGA 57.812 40.909 7.01 0.00 43.02 3.71
2524 4245 4.928661 AAGGTCTTCATCAACGATTTCG 57.071 40.909 0.00 0.00 46.33 3.46
2525 4246 6.590292 TCACTAAGGTCTTCATCAACGATTTC 59.410 38.462 0.00 0.00 0.00 2.17
2526 4247 6.464222 TCACTAAGGTCTTCATCAACGATTT 58.536 36.000 0.00 0.00 0.00 2.17
2527 4248 6.037786 TCACTAAGGTCTTCATCAACGATT 57.962 37.500 0.00 0.00 0.00 3.34
2528 4249 5.661056 TCACTAAGGTCTTCATCAACGAT 57.339 39.130 0.00 0.00 0.00 3.73
2529 4250 5.185056 TCATCACTAAGGTCTTCATCAACGA 59.815 40.000 0.00 0.00 0.00 3.85
2530 4251 5.410924 TCATCACTAAGGTCTTCATCAACG 58.589 41.667 0.00 0.00 0.00 4.10
2531 4252 6.876257 ACTTCATCACTAAGGTCTTCATCAAC 59.124 38.462 0.00 0.00 0.00 3.18
2532 4253 7.009179 ACTTCATCACTAAGGTCTTCATCAA 57.991 36.000 0.00 0.00 0.00 2.57
2533 4254 6.611613 ACTTCATCACTAAGGTCTTCATCA 57.388 37.500 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.