Multiple sequence alignment - TraesCS2B01G620300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G620300 chr2B 100.000 4523 0 0 1 4523 794901505 794896983 0.000000e+00 8353.0
1 TraesCS2B01G620300 chr2B 90.650 246 20 3 1 243 724635036 724635281 1.570000e-84 324.0
2 TraesCS2B01G620300 chr2B 96.410 195 6 1 242 435 603410190 603410384 2.030000e-83 320.0
3 TraesCS2B01G620300 chr2B 85.139 323 33 10 242 551 775408560 775408240 2.630000e-82 316.0
4 TraesCS2B01G620300 chr2B 95.000 140 7 0 434 573 794906383 794906244 2.120000e-53 220.0
5 TraesCS2B01G620300 chr2B 90.909 154 12 2 422 573 106120026 106119873 5.930000e-49 206.0
6 TraesCS2B01G620300 chr2B 83.562 146 20 3 2790 2931 796052205 796052350 2.840000e-27 134.0
7 TraesCS2B01G620300 chr2B 88.571 105 12 0 2470 2574 795425225 795425121 1.320000e-25 128.0
8 TraesCS2B01G620300 chr2B 85.714 63 9 0 3566 3628 464685601 464685539 2.920000e-07 67.6
9 TraesCS2B01G620300 chr2D 92.491 2184 117 24 1842 4015 637528421 637526275 0.000000e+00 3081.0
10 TraesCS2B01G620300 chr2D 91.425 898 28 19 968 1833 637529354 637528474 0.000000e+00 1186.0
11 TraesCS2B01G620300 chr2D 77.749 382 74 8 2741 3112 380938681 380939061 1.640000e-54 224.0
12 TraesCS2B01G620300 chr2D 79.091 330 33 13 2309 2630 637582032 637582333 1.280000e-45 195.0
13 TraesCS2B01G620300 chr2D 88.166 169 4 7 725 889 637529529 637529373 2.150000e-43 187.0
14 TraesCS2B01G620300 chr2D 91.150 113 10 0 4034 4146 637525026 637524914 2.180000e-33 154.0
15 TraesCS2B01G620300 chr2D 95.699 93 4 0 574 666 637529876 637529784 2.820000e-32 150.0
16 TraesCS2B01G620300 chr2D 100.000 37 0 0 703 739 637529584 637529548 8.120000e-08 69.4
17 TraesCS2B01G620300 chr2A 90.089 2018 123 42 2015 4015 762497475 762499432 0.000000e+00 2547.0
18 TraesCS2B01G620300 chr2A 92.846 615 26 2 1117 1725 762496872 762497474 0.000000e+00 876.0
19 TraesCS2B01G620300 chr2A 83.022 536 66 13 2052 2580 762468662 762468145 3.190000e-126 462.0
20 TraesCS2B01G620300 chr2A 77.049 549 90 20 2790 3314 761575422 761575958 2.660000e-72 283.0
21 TraesCS2B01G620300 chr2A 78.105 475 80 10 2793 3252 761827816 761827351 3.450000e-71 279.0
22 TraesCS2B01G620300 chr2A 78.361 476 55 20 4029 4504 762500561 762500988 9.650000e-67 265.0
23 TraesCS2B01G620300 chr2A 79.310 348 70 2 2741 3087 762144777 762145123 4.520000e-60 243.0
24 TraesCS2B01G620300 chr2A 75.530 519 85 25 2069 2564 741986068 741985569 2.740000e-52 217.0
25 TraesCS2B01G620300 chr2A 81.865 193 31 2 3566 3758 530758368 530758180 4.680000e-35 159.0
26 TraesCS2B01G620300 chr2A 91.429 105 9 0 2470 2574 762018921 762019025 1.310000e-30 145.0
27 TraesCS2B01G620300 chr2A 100.000 28 0 0 1016 1043 762496738 762496765 8.000000e-03 52.8
28 TraesCS2B01G620300 chr4A 92.593 243 15 1 4 243 201585606 201585364 3.350000e-91 346.0
29 TraesCS2B01G620300 chr4A 96.392 194 7 0 242 435 649016670 649016477 2.030000e-83 320.0
30 TraesCS2B01G620300 chr4A 91.558 154 11 2 422 573 201584923 201584770 1.270000e-50 211.0
31 TraesCS2B01G620300 chr5D 86.817 311 34 6 243 551 356318648 356318953 1.560000e-89 340.0
32 TraesCS2B01G620300 chr3B 96.907 194 6 0 242 435 29709713 29709520 4.360000e-85 326.0
33 TraesCS2B01G620300 chr3B 85.306 245 23 4 1 243 137891989 137891756 1.630000e-59 241.0
34 TraesCS2B01G620300 chr3B 91.613 155 12 1 422 575 137891425 137891271 3.540000e-51 213.0
35 TraesCS2B01G620300 chr3B 90.850 153 12 2 422 573 60620712 60620561 2.130000e-48 204.0
36 TraesCS2B01G620300 chr3B 92.857 56 3 1 925 979 540460730 540460675 3.750000e-11 80.5
37 TraesCS2B01G620300 chr3B 100.000 31 0 0 3481 3511 202538002 202538032 1.760000e-04 58.4
38 TraesCS2B01G620300 chr3B 100.000 28 0 0 3479 3506 690875954 690875981 8.000000e-03 52.8
39 TraesCS2B01G620300 chr7A 96.392 194 7 0 242 435 691632746 691632553 2.030000e-83 320.0
40 TraesCS2B01G620300 chr7A 83.858 254 30 8 1 243 288056198 288055945 9.790000e-57 231.0
41 TraesCS2B01G620300 chr7A 92.727 55 3 1 928 981 664789432 664789486 1.350000e-10 78.7
42 TraesCS2B01G620300 chr6B 96.392 194 7 0 242 435 66742524 66742331 2.030000e-83 320.0
43 TraesCS2B01G620300 chr6B 89.062 256 23 5 242 495 305729255 305729003 3.400000e-81 313.0
44 TraesCS2B01G620300 chr5A 96.392 194 7 0 242 435 552773931 552774124 2.030000e-83 320.0
45 TraesCS2B01G620300 chr5A 90.850 153 11 3 422 573 545568333 545568183 7.670000e-48 202.0
46 TraesCS2B01G620300 chr5A 88.889 72 5 3 909 979 693261101 693261032 8.060000e-13 86.1
47 TraesCS2B01G620300 chr7B 87.398 246 19 4 1 243 664361438 664361202 5.770000e-69 272.0
48 TraesCS2B01G620300 chr7B 91.500 200 12 2 1 197 639407479 639407282 2.070000e-68 270.0
49 TraesCS2B01G620300 chr7B 86.345 249 19 6 1 243 732499742 732499503 1.610000e-64 257.0
50 TraesCS2B01G620300 chr7B 93.617 141 8 1 434 573 639412212 639412072 4.580000e-50 209.0
51 TraesCS2B01G620300 chr7B 90.850 153 13 1 422 573 664360878 664360726 2.130000e-48 204.0
52 TraesCS2B01G620300 chr7B 92.063 63 5 0 181 243 511320100 511320162 6.230000e-14 89.8
53 TraesCS2B01G620300 chr7B 97.778 45 1 0 199 243 639407298 639407254 1.350000e-10 78.7
54 TraesCS2B01G620300 chr6A 88.780 205 18 4 3 203 39186144 39186347 3.490000e-61 246.0
55 TraesCS2B01G620300 chr4D 89.000 200 19 1 1 197 497408741 497408940 1.260000e-60 244.0
56 TraesCS2B01G620300 chr4D 91.379 58 3 1 912 969 340091397 340091452 1.350000e-10 78.7
57 TraesCS2B01G620300 chr4D 97.778 45 1 0 199 243 497408924 497408968 1.350000e-10 78.7
58 TraesCS2B01G620300 chr5B 90.385 156 14 1 419 573 584850541 584850696 2.130000e-48 204.0
59 TraesCS2B01G620300 chr5B 85.625 160 19 3 87 243 324981724 324981566 1.010000e-36 165.0
60 TraesCS2B01G620300 chrUn 91.089 101 9 0 2470 2570 22369397 22369497 2.190000e-28 137.0
61 TraesCS2B01G620300 chrUn 100.000 31 0 0 3479 3509 67348781 67348811 1.760000e-04 58.4
62 TraesCS2B01G620300 chrUn 100.000 31 0 0 3479 3509 271439003 271438973 1.760000e-04 58.4
63 TraesCS2B01G620300 chr3A 88.889 99 11 0 4425 4523 706060380 706060478 6.140000e-24 122.0
64 TraesCS2B01G620300 chr3A 97.872 47 1 0 928 974 638201891 638201845 1.040000e-11 82.4
65 TraesCS2B01G620300 chr3D 92.727 55 2 2 924 977 609618483 609618430 1.350000e-10 78.7
66 TraesCS2B01G620300 chr3D 96.970 33 1 0 3479 3511 84572834 84572802 6.320000e-04 56.5
67 TraesCS2B01G620300 chr3D 100.000 28 0 0 3484 3511 23670351 23670324 8.000000e-03 52.8
68 TraesCS2B01G620300 chr3D 96.774 31 1 0 3481 3511 496929401 496929431 8.000000e-03 52.8
69 TraesCS2B01G620300 chr1D 88.525 61 5 2 928 988 448238316 448238258 6.280000e-09 73.1
70 TraesCS2B01G620300 chr1B 85.507 69 7 3 928 995 516891046 516890980 8.120000e-08 69.4
71 TraesCS2B01G620300 chr1B 85.507 69 7 3 928 995 516916588 516916522 8.120000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G620300 chr2B 794896983 794901505 4522 True 8353.000000 8353 100.000000 1 4523 1 chr2B.!!$R4 4522
1 TraesCS2B01G620300 chr2D 637524914 637529876 4962 True 804.566667 3081 93.155167 574 4146 6 chr2D.!!$R1 3572
2 TraesCS2B01G620300 chr2A 762496738 762500988 4250 False 935.200000 2547 90.324000 1016 4504 4 chr2A.!!$F4 3488
3 TraesCS2B01G620300 chr2A 762468145 762468662 517 True 462.000000 462 83.022000 2052 2580 1 chr2A.!!$R4 528
4 TraesCS2B01G620300 chr2A 761575422 761575958 536 False 283.000000 283 77.049000 2790 3314 1 chr2A.!!$F1 524
5 TraesCS2B01G620300 chr4A 201584770 201585606 836 True 278.500000 346 92.075500 4 573 2 chr4A.!!$R2 569
6 TraesCS2B01G620300 chr3B 137891271 137891989 718 True 227.000000 241 88.459500 1 575 2 chr3B.!!$R4 574
7 TraesCS2B01G620300 chr7B 664360726 664361438 712 True 238.000000 272 89.124000 1 573 2 chr7B.!!$R4 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 265 0.106819 ATGCTCCAGCCAACTCATCC 60.107 55.0 0.0 0.0 41.18 3.51 F
317 321 0.107831 TTTCAACACTCCCCCTCACG 59.892 55.0 0.0 0.0 0.00 4.35 F
321 325 0.113776 AACACTCCCCCTCACGTCTA 59.886 55.0 0.0 0.0 0.00 2.59 F
1752 2307 0.175989 GTTGCTCGCCTTACTAGCCT 59.824 55.0 0.0 0.0 36.26 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1475 2019 0.030705 CCTCCTTGGGATCCTCCTCA 60.031 60.000 12.58 0.00 36.57 3.86 R
1510 2054 0.179150 CTCCTTCTTCACGAGCTCGG 60.179 60.000 36.93 25.75 44.95 4.63 R
1924 2528 1.463444 GCTTAATCGTTGTCGCCACTT 59.537 47.619 0.00 0.00 36.96 3.16 R
3709 4358 0.107703 CTGGCAGACGGGCTAAATCA 60.108 55.000 9.42 0.00 43.83 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.910585 GTAGGGTGATGCCGGCCG 62.911 72.222 26.77 21.04 38.44 6.13
243 247 4.873129 CGTAGGCAGTCGGCGCAT 62.873 66.667 10.83 1.56 46.16 4.73
255 259 4.487412 GCGCATGCTCCAGCCAAC 62.487 66.667 17.13 0.00 41.18 3.77
256 260 2.749044 CGCATGCTCCAGCCAACT 60.749 61.111 17.13 0.00 41.18 3.16
258 262 1.676635 GCATGCTCCAGCCAACTCA 60.677 57.895 11.37 0.00 41.18 3.41
259 263 1.035932 GCATGCTCCAGCCAACTCAT 61.036 55.000 11.37 0.00 41.18 2.90
261 265 0.106819 ATGCTCCAGCCAACTCATCC 60.107 55.000 0.00 0.00 41.18 3.51
262 266 1.300963 GCTCCAGCCAACTCATCCA 59.699 57.895 0.00 0.00 34.31 3.41
263 267 0.322816 GCTCCAGCCAACTCATCCAA 60.323 55.000 0.00 0.00 34.31 3.53
264 268 1.887956 GCTCCAGCCAACTCATCCAAA 60.888 52.381 0.00 0.00 34.31 3.28
265 269 2.517959 CTCCAGCCAACTCATCCAAAA 58.482 47.619 0.00 0.00 0.00 2.44
267 271 2.158475 TCCAGCCAACTCATCCAAAAGT 60.158 45.455 0.00 0.00 0.00 2.66
268 272 2.229784 CCAGCCAACTCATCCAAAAGTC 59.770 50.000 0.00 0.00 0.00 3.01
269 273 2.229784 CAGCCAACTCATCCAAAAGTCC 59.770 50.000 0.00 0.00 0.00 3.85
270 274 2.158475 AGCCAACTCATCCAAAAGTCCA 60.158 45.455 0.00 0.00 0.00 4.02
271 275 2.627699 GCCAACTCATCCAAAAGTCCAA 59.372 45.455 0.00 0.00 0.00 3.53
272 276 3.069443 GCCAACTCATCCAAAAGTCCAAA 59.931 43.478 0.00 0.00 0.00 3.28
273 277 4.620982 CCAACTCATCCAAAAGTCCAAAC 58.379 43.478 0.00 0.00 0.00 2.93
275 279 5.534654 CCAACTCATCCAAAAGTCCAAACTA 59.465 40.000 0.00 0.00 33.48 2.24
276 280 6.040391 CCAACTCATCCAAAAGTCCAAACTAA 59.960 38.462 0.00 0.00 33.48 2.24
278 282 7.219484 ACTCATCCAAAAGTCCAAACTAATG 57.781 36.000 0.00 0.00 33.48 1.90
287 291 1.564348 TCCAAACTAATGGAGGGAGGC 59.436 52.381 0.00 0.00 44.52 4.70
289 293 0.546598 AAACTAATGGAGGGAGGCGG 59.453 55.000 0.00 0.00 0.00 6.13
295 299 3.168528 GGAGGGAGGCGGGCAATA 61.169 66.667 3.78 0.00 0.00 1.90
296 300 2.529744 GGAGGGAGGCGGGCAATAT 61.530 63.158 3.78 0.00 0.00 1.28
297 301 1.198759 GGAGGGAGGCGGGCAATATA 61.199 60.000 3.78 0.00 0.00 0.86
298 302 0.912486 GAGGGAGGCGGGCAATATAT 59.088 55.000 3.78 0.00 0.00 0.86
299 303 1.282157 GAGGGAGGCGGGCAATATATT 59.718 52.381 3.78 0.00 0.00 1.28
300 304 1.710809 AGGGAGGCGGGCAATATATTT 59.289 47.619 3.78 0.00 0.00 1.40
302 306 2.554344 GGGAGGCGGGCAATATATTTCA 60.554 50.000 3.78 0.00 0.00 2.69
304 308 3.057526 GGAGGCGGGCAATATATTTCAAC 60.058 47.826 3.78 0.00 0.00 3.18
305 309 3.561143 AGGCGGGCAATATATTTCAACA 58.439 40.909 3.78 0.00 0.00 3.33
306 310 3.317993 AGGCGGGCAATATATTTCAACAC 59.682 43.478 3.78 0.00 0.00 3.32
307 311 3.317993 GGCGGGCAATATATTTCAACACT 59.682 43.478 0.00 0.00 0.00 3.55
309 313 4.556699 GCGGGCAATATATTTCAACACTCC 60.557 45.833 0.00 0.00 0.00 3.85
310 314 4.023193 CGGGCAATATATTTCAACACTCCC 60.023 45.833 0.00 0.00 0.00 4.30
312 316 4.280929 GGCAATATATTTCAACACTCCCCC 59.719 45.833 0.00 0.00 0.00 5.40
313 317 5.140454 GCAATATATTTCAACACTCCCCCT 58.860 41.667 0.00 0.00 0.00 4.79
316 320 2.586648 ATTTCAACACTCCCCCTCAC 57.413 50.000 0.00 0.00 0.00 3.51
317 321 0.107831 TTTCAACACTCCCCCTCACG 59.892 55.000 0.00 0.00 0.00 4.35
319 323 1.004918 CAACACTCCCCCTCACGTC 60.005 63.158 0.00 0.00 0.00 4.34
320 324 1.152312 AACACTCCCCCTCACGTCT 60.152 57.895 0.00 0.00 0.00 4.18
321 325 0.113776 AACACTCCCCCTCACGTCTA 59.886 55.000 0.00 0.00 0.00 2.59
322 326 0.323542 ACACTCCCCCTCACGTCTAG 60.324 60.000 0.00 0.00 0.00 2.43
323 327 1.038130 CACTCCCCCTCACGTCTAGG 61.038 65.000 6.51 6.51 0.00 3.02
324 328 2.043248 TCCCCCTCACGTCTAGGC 60.043 66.667 7.81 0.00 32.34 3.93
325 329 2.042843 CCCCCTCACGTCTAGGCT 60.043 66.667 7.81 0.00 32.34 4.58
326 330 1.229359 CCCCCTCACGTCTAGGCTA 59.771 63.158 7.81 0.00 32.34 3.93
327 331 0.178958 CCCCCTCACGTCTAGGCTAT 60.179 60.000 7.81 0.00 32.34 2.97
328 332 1.705873 CCCCTCACGTCTAGGCTATT 58.294 55.000 7.81 0.00 32.34 1.73
330 334 2.434702 CCCCTCACGTCTAGGCTATTTT 59.565 50.000 7.81 0.00 32.34 1.82
331 335 3.640029 CCCCTCACGTCTAGGCTATTTTA 59.360 47.826 7.81 0.00 32.34 1.52
332 336 4.262079 CCCCTCACGTCTAGGCTATTTTAG 60.262 50.000 7.81 0.00 32.34 1.85
334 338 5.507650 CCCTCACGTCTAGGCTATTTTAGTC 60.508 48.000 7.81 0.00 32.34 2.59
337 341 5.655532 TCACGTCTAGGCTATTTTAGTCCTT 59.344 40.000 0.00 0.00 35.16 3.36
338 342 6.830324 TCACGTCTAGGCTATTTTAGTCCTTA 59.170 38.462 0.00 0.00 35.16 2.69
339 343 7.013083 TCACGTCTAGGCTATTTTAGTCCTTAG 59.987 40.741 0.00 0.00 35.16 2.18
340 344 7.013083 CACGTCTAGGCTATTTTAGTCCTTAGA 59.987 40.741 0.00 0.00 35.16 2.10
354 472 1.681793 CCTTAGACGTGGGATCGATGT 59.318 52.381 0.54 0.00 34.70 3.06
359 477 1.006102 CGTGGGATCGATGTAGGCC 60.006 63.158 0.54 0.00 0.00 5.19
362 480 2.734591 GGATCGATGTAGGCCGCA 59.265 61.111 0.54 0.22 0.00 5.69
366 484 1.109920 ATCGATGTAGGCCGCAGAGT 61.110 55.000 0.00 0.00 0.00 3.24
369 487 2.005960 GATGTAGGCCGCAGAGTCGT 62.006 60.000 8.88 0.00 0.00 4.34
370 488 1.605058 ATGTAGGCCGCAGAGTCGTT 61.605 55.000 8.88 0.00 0.00 3.85
371 489 1.080025 GTAGGCCGCAGAGTCGTTT 60.080 57.895 0.00 0.00 0.00 3.60
372 490 0.669625 GTAGGCCGCAGAGTCGTTTT 60.670 55.000 0.00 0.00 0.00 2.43
373 491 0.889994 TAGGCCGCAGAGTCGTTTTA 59.110 50.000 0.00 0.00 0.00 1.52
374 492 0.249398 AGGCCGCAGAGTCGTTTTAT 59.751 50.000 0.00 0.00 0.00 1.40
375 493 1.084289 GGCCGCAGAGTCGTTTTATT 58.916 50.000 0.00 0.00 0.00 1.40
376 494 1.467342 GGCCGCAGAGTCGTTTTATTT 59.533 47.619 0.00 0.00 0.00 1.40
377 495 2.674357 GGCCGCAGAGTCGTTTTATTTA 59.326 45.455 0.00 0.00 0.00 1.40
378 496 3.125658 GGCCGCAGAGTCGTTTTATTTAA 59.874 43.478 0.00 0.00 0.00 1.52
380 498 5.006941 GGCCGCAGAGTCGTTTTATTTAATA 59.993 40.000 0.00 0.00 0.00 0.98
381 499 5.900242 GCCGCAGAGTCGTTTTATTTAATAC 59.100 40.000 0.00 0.00 0.00 1.89
382 500 6.238022 GCCGCAGAGTCGTTTTATTTAATACT 60.238 38.462 0.00 0.00 0.00 2.12
384 502 6.623743 CGCAGAGTCGTTTTATTTAATACTGC 59.376 38.462 0.00 0.00 41.18 4.40
385 503 6.623743 GCAGAGTCGTTTTATTTAATACTGCG 59.376 38.462 0.00 1.48 36.91 5.18
386 504 7.672738 CAGAGTCGTTTTATTTAATACTGCGT 58.327 34.615 0.00 0.00 0.00 5.24
387 505 8.166706 CAGAGTCGTTTTATTTAATACTGCGTT 58.833 33.333 0.00 0.00 0.00 4.84
388 506 8.166706 AGAGTCGTTTTATTTAATACTGCGTTG 58.833 33.333 0.00 0.00 0.00 4.10
389 507 7.238571 AGTCGTTTTATTTAATACTGCGTTGG 58.761 34.615 0.00 0.00 0.00 3.77
390 508 6.022017 GTCGTTTTATTTAATACTGCGTTGGC 60.022 38.462 0.00 0.00 40.52 4.52
399 517 2.594303 TGCGTTGGCAGGGTCTTG 60.594 61.111 0.00 0.00 46.21 3.02
400 518 2.281484 GCGTTGGCAGGGTCTTGA 60.281 61.111 0.00 0.00 39.62 3.02
401 519 1.896660 GCGTTGGCAGGGTCTTGAA 60.897 57.895 0.00 0.00 39.62 2.69
403 521 0.535102 CGTTGGCAGGGTCTTGAACT 60.535 55.000 0.00 0.00 0.00 3.01
404 522 1.239347 GTTGGCAGGGTCTTGAACTC 58.761 55.000 0.00 0.00 0.00 3.01
405 523 0.843309 TTGGCAGGGTCTTGAACTCA 59.157 50.000 0.00 0.00 0.00 3.41
420 579 2.969628 ACTCAAGACCTATTGGCTCG 57.030 50.000 0.00 0.00 36.63 5.03
429 588 3.767673 GACCTATTGGCTCGGATACCATA 59.232 47.826 1.20 0.00 35.42 2.74
432 591 5.118990 CCTATTGGCTCGGATACCATATTG 58.881 45.833 1.20 1.24 35.42 1.90
438 597 4.385825 GCTCGGATACCATATTGAACCAA 58.614 43.478 0.00 0.00 0.00 3.67
442 601 7.470009 GCTCGGATACCATATTGAACCAAAATT 60.470 37.037 0.00 0.00 0.00 1.82
578 869 9.125906 GTATACATATACAGTCTAACAAAGGCG 57.874 37.037 0.00 0.00 38.66 5.52
613 904 3.782042 GAAGTGTCGATGCCGGAC 58.218 61.111 5.05 0.00 36.24 4.79
630 921 2.852413 CGGACAAGTCGATGTGTATGTC 59.148 50.000 0.00 2.23 37.14 3.06
637 928 1.329599 TCGATGTGTATGTCGGAGTCG 59.670 52.381 0.00 0.00 38.34 4.18
666 957 1.019673 GACGTGCTCGACCAGGTATA 58.980 55.000 16.04 0.00 40.62 1.47
668 959 2.810274 GACGTGCTCGACCAGGTATATA 59.190 50.000 16.04 0.00 40.62 0.86
669 960 3.418995 ACGTGCTCGACCAGGTATATAT 58.581 45.455 16.04 0.00 40.62 0.86
670 961 3.190744 ACGTGCTCGACCAGGTATATATG 59.809 47.826 16.04 0.00 40.62 1.78
671 962 3.190744 CGTGCTCGACCAGGTATATATGT 59.809 47.826 1.00 0.00 39.71 2.29
673 964 4.923871 GTGCTCGACCAGGTATATATGTTG 59.076 45.833 0.00 0.00 0.00 3.33
674 965 3.927142 GCTCGACCAGGTATATATGTTGC 59.073 47.826 0.00 0.00 0.00 4.17
675 966 4.495422 CTCGACCAGGTATATATGTTGCC 58.505 47.826 0.00 0.00 0.00 4.52
676 967 4.157246 TCGACCAGGTATATATGTTGCCT 58.843 43.478 0.00 0.00 0.00 4.75
677 968 4.591498 TCGACCAGGTATATATGTTGCCTT 59.409 41.667 0.00 0.00 0.00 4.35
678 969 4.929808 CGACCAGGTATATATGTTGCCTTC 59.070 45.833 0.00 0.00 0.00 3.46
679 970 5.279506 CGACCAGGTATATATGTTGCCTTCT 60.280 44.000 0.00 0.00 0.00 2.85
680 971 6.071560 CGACCAGGTATATATGTTGCCTTCTA 60.072 42.308 0.00 0.00 0.00 2.10
681 972 7.246171 ACCAGGTATATATGTTGCCTTCTAG 57.754 40.000 0.00 0.00 0.00 2.43
739 1193 3.780902 TCCGTCAAGTAGTACATGCATG 58.219 45.455 25.09 25.09 0.00 4.06
740 1194 3.445805 TCCGTCAAGTAGTACATGCATGA 59.554 43.478 32.75 13.72 0.00 3.07
741 1195 4.099419 TCCGTCAAGTAGTACATGCATGAT 59.901 41.667 32.75 19.09 0.00 2.45
742 1196 4.811024 CCGTCAAGTAGTACATGCATGATT 59.189 41.667 32.75 18.34 0.00 2.57
746 1227 7.382218 CGTCAAGTAGTACATGCATGATTATGA 59.618 37.037 32.75 20.80 36.36 2.15
756 1237 7.600065 ACATGCATGATTATGATTAGGAAAGC 58.400 34.615 32.75 0.00 36.36 3.51
774 1255 4.679373 AAGCGTCAAGAGTCCATGATAT 57.321 40.909 0.00 0.00 0.00 1.63
775 1256 5.791336 AAGCGTCAAGAGTCCATGATATA 57.209 39.130 0.00 0.00 0.00 0.86
776 1257 5.127693 AGCGTCAAGAGTCCATGATATAC 57.872 43.478 0.00 0.00 0.00 1.47
777 1258 4.830046 AGCGTCAAGAGTCCATGATATACT 59.170 41.667 0.00 0.00 0.00 2.12
833 1314 3.305813 CGGCTTGAAGTAGTACTTGTCCA 60.306 47.826 20.21 9.29 38.80 4.02
885 1370 4.399219 TCCATAGTCGGAGTAGGATTGAG 58.601 47.826 6.11 0.00 0.00 3.02
886 1371 4.141228 TCCATAGTCGGAGTAGGATTGAGT 60.141 45.833 6.11 0.00 0.00 3.41
887 1372 4.585162 CCATAGTCGGAGTAGGATTGAGTT 59.415 45.833 6.11 0.00 0.00 3.01
888 1373 5.508153 CCATAGTCGGAGTAGGATTGAGTTG 60.508 48.000 6.11 0.00 0.00 3.16
889 1374 2.761208 AGTCGGAGTAGGATTGAGTTGG 59.239 50.000 0.00 0.00 0.00 3.77
890 1375 2.496470 GTCGGAGTAGGATTGAGTTGGT 59.504 50.000 0.00 0.00 0.00 3.67
891 1376 2.758979 TCGGAGTAGGATTGAGTTGGTC 59.241 50.000 0.00 0.00 0.00 4.02
892 1377 2.479730 CGGAGTAGGATTGAGTTGGTCG 60.480 54.545 0.00 0.00 0.00 4.79
893 1378 2.496470 GGAGTAGGATTGAGTTGGTCGT 59.504 50.000 0.00 0.00 0.00 4.34
894 1379 3.512680 GAGTAGGATTGAGTTGGTCGTG 58.487 50.000 0.00 0.00 0.00 4.35
895 1380 3.162666 AGTAGGATTGAGTTGGTCGTGA 58.837 45.455 0.00 0.00 0.00 4.35
896 1381 2.751166 AGGATTGAGTTGGTCGTGAG 57.249 50.000 0.00 0.00 0.00 3.51
897 1382 1.971357 AGGATTGAGTTGGTCGTGAGT 59.029 47.619 0.00 0.00 0.00 3.41
898 1383 2.028930 AGGATTGAGTTGGTCGTGAGTC 60.029 50.000 0.00 0.00 0.00 3.36
899 1384 2.028930 GGATTGAGTTGGTCGTGAGTCT 60.029 50.000 0.00 0.00 0.00 3.24
900 1385 3.555168 GGATTGAGTTGGTCGTGAGTCTT 60.555 47.826 0.00 0.00 0.00 3.01
901 1386 2.509052 TGAGTTGGTCGTGAGTCTTG 57.491 50.000 0.00 0.00 0.00 3.02
921 1406 3.997762 TGGTTGCCGGATATGTATGTAC 58.002 45.455 5.05 0.00 0.00 2.90
922 1407 3.388350 TGGTTGCCGGATATGTATGTACA 59.612 43.478 5.05 0.00 40.98 2.90
923 1408 3.994392 GGTTGCCGGATATGTATGTACAG 59.006 47.826 5.05 0.00 39.92 2.74
924 1409 4.502604 GGTTGCCGGATATGTATGTACAGT 60.503 45.833 5.05 0.00 39.92 3.55
925 1410 5.279106 GGTTGCCGGATATGTATGTACAGTA 60.279 44.000 5.05 0.00 39.92 2.74
926 1411 5.638596 TGCCGGATATGTATGTACAGTAG 57.361 43.478 5.05 0.00 39.92 2.57
927 1412 5.074804 TGCCGGATATGTATGTACAGTAGT 58.925 41.667 5.05 0.00 39.92 2.73
928 1413 5.537295 TGCCGGATATGTATGTACAGTAGTT 59.463 40.000 5.05 0.00 39.92 2.24
929 1414 5.862323 GCCGGATATGTATGTACAGTAGTTG 59.138 44.000 5.05 0.00 39.92 3.16
930 1415 6.294342 GCCGGATATGTATGTACAGTAGTTGA 60.294 42.308 5.05 0.00 39.92 3.18
931 1416 7.654568 CCGGATATGTATGTACAGTAGTTGAA 58.345 38.462 0.00 0.00 39.92 2.69
932 1417 7.594015 CCGGATATGTATGTACAGTAGTTGAAC 59.406 40.741 0.00 0.00 39.92 3.18
933 1418 8.350722 CGGATATGTATGTACAGTAGTTGAACT 58.649 37.037 2.37 2.37 39.92 3.01
939 1424 9.480053 TGTATGTACAGTAGTTGAACTAAAACC 57.520 33.333 6.63 0.00 31.62 3.27
940 1425 9.480053 GTATGTACAGTAGTTGAACTAAAACCA 57.520 33.333 6.63 1.66 31.62 3.67
941 1426 7.775397 TGTACAGTAGTTGAACTAAAACCAC 57.225 36.000 6.63 3.12 31.62 4.16
942 1427 5.978934 ACAGTAGTTGAACTAAAACCACG 57.021 39.130 6.63 0.00 31.62 4.94
943 1428 5.663456 ACAGTAGTTGAACTAAAACCACGA 58.337 37.500 6.63 0.00 31.62 4.35
944 1429 5.521372 ACAGTAGTTGAACTAAAACCACGAC 59.479 40.000 6.63 0.00 31.62 4.34
945 1430 4.741676 AGTAGTTGAACTAAAACCACGACG 59.258 41.667 6.63 0.00 31.62 5.12
946 1431 3.784338 AGTTGAACTAAAACCACGACGA 58.216 40.909 0.00 0.00 0.00 4.20
947 1432 3.800506 AGTTGAACTAAAACCACGACGAG 59.199 43.478 0.00 0.00 0.00 4.18
948 1433 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
949 1434 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
950 1435 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
951 1436 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
952 1437 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
953 1438 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
954 1439 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
955 1440 5.984926 ACTAAAACCACGACGAGTAATTTGA 59.015 36.000 0.00 0.00 0.00 2.69
956 1441 5.738118 AAAACCACGACGAGTAATTTGAA 57.262 34.783 0.00 0.00 0.00 2.69
957 1442 5.738118 AAACCACGACGAGTAATTTGAAA 57.262 34.783 0.00 0.00 0.00 2.69
958 1443 4.720530 ACCACGACGAGTAATTTGAAAC 57.279 40.909 0.00 0.00 0.00 2.78
959 1444 3.182972 ACCACGACGAGTAATTTGAAACG 59.817 43.478 0.00 0.00 0.00 3.60
960 1445 3.422603 CCACGACGAGTAATTTGAAACGG 60.423 47.826 0.00 0.00 0.00 4.44
961 1446 3.426191 CACGACGAGTAATTTGAAACGGA 59.574 43.478 0.00 0.00 0.00 4.69
962 1447 3.671928 ACGACGAGTAATTTGAAACGGAG 59.328 43.478 0.00 0.00 0.00 4.63
963 1448 3.060363 CGACGAGTAATTTGAAACGGAGG 59.940 47.826 0.00 0.00 0.00 4.30
964 1449 4.240096 GACGAGTAATTTGAAACGGAGGA 58.760 43.478 0.00 0.00 0.00 3.71
965 1450 4.634199 ACGAGTAATTTGAAACGGAGGAA 58.366 39.130 0.00 0.00 0.00 3.36
966 1451 4.689345 ACGAGTAATTTGAAACGGAGGAAG 59.311 41.667 0.00 0.00 0.00 3.46
1010 1499 6.092259 GGTAGACCATAGTTTTGTAGCACAAG 59.908 42.308 0.00 0.00 36.26 3.16
1096 1607 7.262772 CAAACGGACAAGATAATGGACTACTA 58.737 38.462 0.00 0.00 0.00 1.82
1097 1608 6.388435 ACGGACAAGATAATGGACTACTAC 57.612 41.667 0.00 0.00 0.00 2.73
1126 1664 2.356313 CGCTGCTGACGACAAGGT 60.356 61.111 0.00 0.00 0.00 3.50
1160 1698 4.259356 TCATCTTGCAAGACATGGAGAAG 58.741 43.478 30.66 11.99 37.98 2.85
1239 1777 2.650116 GCTTCCTCCGTCTGCTCCA 61.650 63.158 0.00 0.00 0.00 3.86
1316 1854 2.363359 GGAATTCCCCATTGATCAGCAC 59.637 50.000 14.03 0.00 0.00 4.40
1359 1897 1.075600 GTGGAGGAGGAGGAGGAGG 60.076 68.421 0.00 0.00 0.00 4.30
1363 1901 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1364 1902 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1365 1903 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1366 1904 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1367 1905 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1421 1959 7.732025 TCAACAAGTACTATGAGTTTCCTGAA 58.268 34.615 0.00 0.00 0.00 3.02
1475 2019 1.950828 CAGAAGAAGAGGATGCGCAT 58.049 50.000 25.66 25.66 0.00 4.73
1482 2026 1.301558 GAGGATGCGCATGAGGAGG 60.302 63.158 30.76 0.00 0.00 4.30
1510 2054 1.359459 GAGGTTGGGATGACGTTCGC 61.359 60.000 0.00 0.00 0.00 4.70
1652 2199 0.263765 ATTCATGGGGCAGCAAGGAT 59.736 50.000 0.00 0.00 0.00 3.24
1694 2241 5.233050 CGGAGATGCAAGTAAGTCAACATAG 59.767 44.000 0.00 0.00 0.00 2.23
1749 2304 2.893637 ACATGTTGCTCGCCTTACTAG 58.106 47.619 0.00 0.00 0.00 2.57
1750 2305 1.594862 CATGTTGCTCGCCTTACTAGC 59.405 52.381 0.00 0.00 37.59 3.42
1752 2307 0.175989 GTTGCTCGCCTTACTAGCCT 59.824 55.000 0.00 0.00 36.26 4.58
1754 2309 0.460311 TGCTCGCCTTACTAGCCTTC 59.540 55.000 0.00 0.00 36.26 3.46
1760 2315 3.119101 TCGCCTTACTAGCCTTCTTCTTG 60.119 47.826 0.00 0.00 0.00 3.02
1833 2392 7.149569 TGCTCAATCCTAAAATCTGAACAAG 57.850 36.000 0.00 0.00 0.00 3.16
1835 2394 7.882791 TGCTCAATCCTAAAATCTGAACAAGTA 59.117 33.333 0.00 0.00 0.00 2.24
1836 2395 8.730680 GCTCAATCCTAAAATCTGAACAAGTAA 58.269 33.333 0.00 0.00 0.00 2.24
1887 2490 3.264193 ACTGATTTACCTGACCATGCTCA 59.736 43.478 0.00 0.00 0.00 4.26
1894 2497 2.040813 ACCTGACCATGCTCACAATCTT 59.959 45.455 0.00 0.00 0.00 2.40
1941 2545 6.368243 TGTTTATAAAGTGGCGACAACGATTA 59.632 34.615 0.00 0.00 46.06 1.75
1956 2560 8.933955 CGACAACGATTAAGCAAACAATAATAG 58.066 33.333 0.00 0.00 42.66 1.73
1977 2581 8.829373 AATAGCTCAACCAATTTCCTTTCTAT 57.171 30.769 0.00 0.00 0.00 1.98
2007 2615 0.245266 CACATGCATGCTTCTTGCCA 59.755 50.000 26.53 0.00 42.00 4.92
2035 2643 7.550196 ACTTCGTTTCTCCTTGTGTAAGTAAAA 59.450 33.333 0.00 0.00 31.80 1.52
2040 2648 7.797038 TTCTCCTTGTGTAAGTAAAAGGAAC 57.203 36.000 4.68 0.00 45.70 3.62
2062 2670 4.923281 ACGGCAGAAATGTTTAATTTGCTC 59.077 37.500 0.00 0.00 0.00 4.26
2426 3041 4.882671 ACATTTGTAGTCCATTGCGATC 57.117 40.909 0.00 0.00 0.00 3.69
2427 3042 3.309682 ACATTTGTAGTCCATTGCGATCG 59.690 43.478 11.69 11.69 0.00 3.69
2428 3043 2.951457 TTGTAGTCCATTGCGATCGA 57.049 45.000 21.57 0.00 0.00 3.59
2429 3044 3.452755 TTGTAGTCCATTGCGATCGAT 57.547 42.857 21.57 0.00 0.00 3.59
2443 3058 9.009327 CATTGCGATCGATTAAGTATTTTTGTT 57.991 29.630 21.57 0.00 0.00 2.83
2445 3060 8.595781 TGCGATCGATTAAGTATTTTTGTTTC 57.404 30.769 21.57 0.00 0.00 2.78
2446 3061 8.447833 TGCGATCGATTAAGTATTTTTGTTTCT 58.552 29.630 21.57 0.00 0.00 2.52
2447 3062 9.274065 GCGATCGATTAAGTATTTTTGTTTCTT 57.726 29.630 21.57 0.00 0.00 2.52
2520 3141 2.972625 TCTTTATGCTTGACTGGTCCG 58.027 47.619 0.00 0.00 0.00 4.79
2679 3300 2.135139 TGTGTCGCAGAGTTCAACATC 58.865 47.619 0.00 0.00 36.95 3.06
2775 3396 1.078848 ATGCCGAGTTGTCTGCTCC 60.079 57.895 0.00 0.00 34.19 4.70
2817 3438 7.434492 CAACAGAGGATATTCGTACCACTTAT 58.566 38.462 0.00 0.00 0.00 1.73
2949 3570 0.473755 TGGCCATCGAAGCATATGGT 59.526 50.000 0.00 0.40 43.87 3.55
2962 3583 3.043586 GCATATGGTAAGTCTCGTCACG 58.956 50.000 4.56 0.00 0.00 4.35
2978 3599 0.673644 CACGGGATTGCTCGAAAGGT 60.674 55.000 0.00 0.00 41.67 3.50
3112 3733 3.008485 GGACCTCTTCCTCAGTTGATTGT 59.992 47.826 0.00 0.00 41.95 2.71
3129 3750 2.401583 TGTGCAGCCATGTAGTAAGG 57.598 50.000 0.00 0.00 0.00 2.69
3154 3781 7.499232 GGTGGCTATGTAAGATGTCAAACTAAT 59.501 37.037 0.00 0.00 0.00 1.73
3374 4022 0.323451 GGGTGGGTGTGGAAATCTCC 60.323 60.000 0.00 0.00 42.81 3.71
3444 4092 6.659242 CAGACATAAAATTGACAAGTACCCCT 59.341 38.462 0.00 0.00 0.00 4.79
3445 4093 6.884836 AGACATAAAATTGACAAGTACCCCTC 59.115 38.462 0.00 0.00 0.00 4.30
3446 4094 6.790319 ACATAAAATTGACAAGTACCCCTCT 58.210 36.000 0.00 0.00 0.00 3.69
3447 4095 6.884836 ACATAAAATTGACAAGTACCCCTCTC 59.115 38.462 0.00 0.00 0.00 3.20
3448 4096 5.584551 AAAATTGACAAGTACCCCTCTCT 57.415 39.130 0.00 0.00 0.00 3.10
3449 4097 5.584551 AAATTGACAAGTACCCCTCTCTT 57.415 39.130 0.00 0.00 0.00 2.85
3450 4098 5.584551 AATTGACAAGTACCCCTCTCTTT 57.415 39.130 0.00 0.00 0.00 2.52
3451 4099 5.584551 ATTGACAAGTACCCCTCTCTTTT 57.415 39.130 0.00 0.00 0.00 2.27
3452 4100 5.382664 TTGACAAGTACCCCTCTCTTTTT 57.617 39.130 0.00 0.00 0.00 1.94
3474 4122 1.334288 GCGGCGTATGTTTGTGCAAC 61.334 55.000 9.37 0.00 35.71 4.17
3477 4125 1.591248 GCGTATGTTTGTGCAACTCG 58.409 50.000 0.00 0.00 38.04 4.18
3495 4143 6.403200 GCAACTCGTATGTATGTTTGACCAAT 60.403 38.462 0.00 0.00 0.00 3.16
3532 4180 8.586570 AAATTGTATTTCACATTTTCGCTTCA 57.413 26.923 0.00 0.00 36.46 3.02
3540 4188 4.155826 TCACATTTTCGCTTCAAATCGGAT 59.844 37.500 0.00 0.00 0.00 4.18
3547 4195 4.631131 TCGCTTCAAATCGGATGTCATAT 58.369 39.130 0.00 0.00 0.00 1.78
3578 4226 4.695455 TCAAGAAATTTTACCTCTCTGGCG 59.305 41.667 0.00 0.00 40.22 5.69
3597 4245 2.651703 GCGTTTGATCGAACATGTTGTG 59.348 45.455 22.76 8.46 0.00 3.33
3600 4248 4.219033 GTTTGATCGAACATGTTGTGGAC 58.781 43.478 17.58 0.00 0.00 4.02
3616 4264 1.595929 GACGCCGGTGGAGTTGAAA 60.596 57.895 21.14 0.00 35.49 2.69
3620 4268 0.322546 GCCGGTGGAGTTGAAAGGAT 60.323 55.000 1.90 0.00 0.00 3.24
3634 4282 1.335132 AAGGATCGCGGGGTACATGT 61.335 55.000 6.13 2.69 0.00 3.21
3655 4303 3.407967 GCCGGATTGGGTGGAGGA 61.408 66.667 5.05 0.00 38.63 3.71
3726 4375 0.392461 TGTGATTTAGCCCGTCTGCC 60.392 55.000 0.00 0.00 0.00 4.85
3727 4376 0.392461 GTGATTTAGCCCGTCTGCCA 60.392 55.000 0.00 0.00 0.00 4.92
3745 4394 2.269241 GAGGGGTTGGAGGAAGCG 59.731 66.667 0.00 0.00 32.41 4.68
3778 4427 2.504519 GCACCCGAGATGGTACCC 59.495 66.667 10.07 0.00 36.67 3.69
3827 4476 1.273759 GGTCGGAAGGGTCCTTACTT 58.726 55.000 10.01 0.00 42.44 2.24
3849 4499 2.617274 GGAGGACGTGTTGCCTTGC 61.617 63.158 0.00 0.00 33.84 4.01
3888 4538 3.711814 TGGAAGGGATTGGCGCGA 61.712 61.111 12.10 0.00 34.07 5.87
3889 4539 3.202706 GGAAGGGATTGGCGCGAC 61.203 66.667 12.10 8.22 34.07 5.19
3890 4540 2.435938 GAAGGGATTGGCGCGACA 60.436 61.111 12.71 12.71 34.07 4.35
3895 4545 2.815211 GATTGGCGCGACAGCAGA 60.815 61.111 17.30 0.00 45.49 4.26
3903 4553 1.621301 CGCGACAGCAGAGAAGTTGG 61.621 60.000 0.00 0.00 45.49 3.77
3905 4555 1.294659 CGACAGCAGAGAAGTTGGCC 61.295 60.000 0.00 0.00 0.00 5.36
3915 4565 2.391724 GAAGTTGGCCGTGGGAGACA 62.392 60.000 0.00 0.00 0.00 3.41
3931 4581 3.557898 GGAGACACAGAATCTCAAGGCAA 60.558 47.826 4.53 0.00 43.80 4.52
3934 4584 2.880890 ACACAGAATCTCAAGGCAACAC 59.119 45.455 0.00 0.00 41.41 3.32
3936 4586 1.466167 CAGAATCTCAAGGCAACACCG 59.534 52.381 0.00 0.00 46.52 4.94
3942 4592 1.303236 CAAGGCAACACCGATGGGA 60.303 57.895 0.00 0.00 46.52 4.37
3945 4595 2.593468 AGGCAACACCGATGGGATCG 62.593 60.000 0.00 0.00 46.52 3.69
3969 4619 0.324285 GGCATGAAAACCAATGGGCA 59.676 50.000 3.55 0.00 37.90 5.36
3986 4636 3.391382 AGTGGCTACGGGTGCTCC 61.391 66.667 0.00 0.00 0.00 4.70
3994 4644 1.920734 TACGGGTGCTCCATGCCATT 61.921 55.000 7.20 0.00 42.00 3.16
3995 4645 2.777972 CGGGTGCTCCATGCCATTG 61.778 63.158 7.20 0.00 42.00 2.82
4026 4676 3.471244 GAGGAGATCGACGGCGGTG 62.471 68.421 12.58 2.47 38.28 4.94
4027 4677 4.570663 GGAGATCGACGGCGGTGG 62.571 72.222 12.58 0.00 38.28 4.61
4042 5924 1.449778 GTGGCGGGTAGAAAGGAGC 60.450 63.158 0.00 0.00 0.00 4.70
4085 5967 0.318762 GCGCGAGAGATAGGGGAAAT 59.681 55.000 12.10 0.00 0.00 2.17
4099 5981 1.153389 GAAATGGCAAATGGGGCGG 60.153 57.895 0.00 0.00 35.84 6.13
4106 5988 1.005630 CAAATGGGGCGGCGAAAAA 60.006 52.632 12.98 0.00 0.00 1.94
4117 5999 2.223479 GCGGCGAAAAATGGACATATGT 60.223 45.455 12.98 8.43 0.00 2.29
4119 6001 3.705604 GGCGAAAAATGGACATATGTGG 58.294 45.455 14.43 0.00 0.00 4.17
4120 6002 3.490761 GGCGAAAAATGGACATATGTGGG 60.491 47.826 14.43 0.00 0.00 4.61
4122 6004 4.733523 GCGAAAAATGGACATATGTGGGAC 60.734 45.833 14.43 0.00 0.00 4.46
4130 6012 2.431057 GACATATGTGGGACTCGAGGTT 59.569 50.000 14.43 0.00 0.00 3.50
4146 6028 2.633481 GAGGTTGAATATACCGCTCCCT 59.367 50.000 0.00 0.00 40.69 4.20
4147 6029 2.368875 AGGTTGAATATACCGCTCCCTG 59.631 50.000 0.00 0.00 40.69 4.45
4149 6031 1.348064 TGAATATACCGCTCCCTGGG 58.652 55.000 6.33 6.33 0.00 4.45
4151 6033 1.489560 AATATACCGCTCCCTGGGCC 61.490 60.000 8.22 0.00 0.00 5.80
4187 6069 1.574702 CCTGCTCGGGTCGTTTTTCC 61.575 60.000 0.00 0.00 0.00 3.13
4207 6089 2.409975 CGCTCTGGAACCTTAAAACGA 58.590 47.619 0.00 0.00 0.00 3.85
4209 6091 2.157085 GCTCTGGAACCTTAAAACGACG 59.843 50.000 0.00 0.00 0.00 5.12
4211 6093 2.102925 TCTGGAACCTTAAAACGACGGT 59.897 45.455 0.00 0.00 0.00 4.83
4212 6094 2.874086 CTGGAACCTTAAAACGACGGTT 59.126 45.455 0.00 0.00 42.11 4.44
4213 6095 4.057432 CTGGAACCTTAAAACGACGGTTA 58.943 43.478 0.00 0.00 39.69 2.85
4214 6096 4.640364 TGGAACCTTAAAACGACGGTTAT 58.360 39.130 0.00 0.00 39.69 1.89
4215 6097 5.062528 TGGAACCTTAAAACGACGGTTATT 58.937 37.500 0.00 0.00 39.69 1.40
4216 6098 5.530543 TGGAACCTTAAAACGACGGTTATTT 59.469 36.000 0.00 0.00 39.69 1.40
4217 6099 6.079763 GGAACCTTAAAACGACGGTTATTTC 58.920 40.000 0.00 0.00 39.69 2.17
4219 6101 4.455533 ACCTTAAAACGACGGTTATTTCCC 59.544 41.667 0.00 0.00 34.62 3.97
4225 6107 2.898343 CGGTTATTTCCCGGGCCG 60.898 66.667 21.46 21.46 41.78 6.13
4235 6117 4.751820 CCGGGCCGGGGATGTTTT 62.752 66.667 37.27 0.00 44.15 2.43
4236 6118 3.138128 CGGGCCGGGGATGTTTTC 61.138 66.667 20.56 0.00 0.00 2.29
4237 6119 2.758327 GGGCCGGGGATGTTTTCC 60.758 66.667 2.18 0.00 44.62 3.13
4238 6120 3.138128 GGCCGGGGATGTTTTCCG 61.138 66.667 2.18 0.00 46.52 4.30
4243 6125 0.818040 CGGGGATGTTTTCCGGGATC 60.818 60.000 0.00 0.00 46.52 3.36
4244 6126 0.257616 GGGGATGTTTTCCGGGATCA 59.742 55.000 0.00 0.00 46.52 2.92
4255 6137 0.246086 CCGGGATCAGCTAGAGATGC 59.754 60.000 0.00 8.11 33.63 3.91
4266 6148 3.069443 AGCTAGAGATGCTCTAACCAAGC 59.931 47.826 5.75 6.79 41.74 4.01
4274 6156 1.403323 GCTCTAACCAAGCATCTTGGC 59.597 52.381 21.73 6.52 43.23 4.52
4276 6158 2.681848 CTCTAACCAAGCATCTTGGCTG 59.318 50.000 21.73 13.48 45.07 4.85
4288 6170 4.082354 GCATCTTGGCTGAGTGAAATTCTT 60.082 41.667 0.00 0.00 0.00 2.52
4295 6177 4.083057 GGCTGAGTGAAATTCTTGGAACTC 60.083 45.833 4.15 4.15 35.66 3.01
4296 6178 4.516698 GCTGAGTGAAATTCTTGGAACTCA 59.483 41.667 11.08 11.08 41.14 3.41
4312 6194 7.162973 TGGAACTCAGGAGAAGATAGGTATA 57.837 40.000 2.79 0.00 0.00 1.47
4318 6200 7.019153 ACTCAGGAGAAGATAGGTATAGTGGAT 59.981 40.741 2.79 0.00 0.00 3.41
4319 6201 7.178573 TCAGGAGAAGATAGGTATAGTGGATG 58.821 42.308 0.00 0.00 0.00 3.51
4320 6202 6.951198 CAGGAGAAGATAGGTATAGTGGATGT 59.049 42.308 0.00 0.00 0.00 3.06
4321 6203 7.122055 CAGGAGAAGATAGGTATAGTGGATGTC 59.878 44.444 0.00 0.00 0.00 3.06
4322 6204 6.948886 GGAGAAGATAGGTATAGTGGATGTCA 59.051 42.308 0.00 0.00 0.00 3.58
4323 6205 7.451877 GGAGAAGATAGGTATAGTGGATGTCAA 59.548 40.741 0.00 0.00 0.00 3.18
4324 6206 8.964533 AGAAGATAGGTATAGTGGATGTCAAT 57.035 34.615 0.00 0.00 0.00 2.57
4325 6207 8.811017 AGAAGATAGGTATAGTGGATGTCAATG 58.189 37.037 0.00 0.00 0.00 2.82
4326 6208 6.940739 AGATAGGTATAGTGGATGTCAATGC 58.059 40.000 0.00 0.00 0.00 3.56
4347 6229 0.696501 GACAAGCAGGTTTAGGGGGA 59.303 55.000 0.00 0.00 0.00 4.81
4352 6234 2.070573 AGCAGGTTTAGGGGGAAGAAA 58.929 47.619 0.00 0.00 0.00 2.52
4353 6235 2.449345 AGCAGGTTTAGGGGGAAGAAAA 59.551 45.455 0.00 0.00 0.00 2.29
4355 6237 3.195610 GCAGGTTTAGGGGGAAGAAAATG 59.804 47.826 0.00 0.00 0.00 2.32
4356 6238 4.416516 CAGGTTTAGGGGGAAGAAAATGT 58.583 43.478 0.00 0.00 0.00 2.71
4357 6239 4.838423 CAGGTTTAGGGGGAAGAAAATGTT 59.162 41.667 0.00 0.00 0.00 2.71
4358 6240 6.014012 CAGGTTTAGGGGGAAGAAAATGTTA 58.986 40.000 0.00 0.00 0.00 2.41
4359 6241 6.014647 AGGTTTAGGGGGAAGAAAATGTTAC 58.985 40.000 0.00 0.00 0.00 2.50
4360 6242 6.014647 GGTTTAGGGGGAAGAAAATGTTACT 58.985 40.000 0.00 0.00 0.00 2.24
4361 6243 7.018851 AGGTTTAGGGGGAAGAAAATGTTACTA 59.981 37.037 0.00 0.00 0.00 1.82
4362 6244 7.338703 GGTTTAGGGGGAAGAAAATGTTACTAG 59.661 40.741 0.00 0.00 0.00 2.57
4363 6245 7.578458 TTAGGGGGAAGAAAATGTTACTAGT 57.422 36.000 0.00 0.00 0.00 2.57
4364 6246 8.683776 TTAGGGGGAAGAAAATGTTACTAGTA 57.316 34.615 0.00 0.00 0.00 1.82
4365 6247 7.766736 AGGGGGAAGAAAATGTTACTAGTAT 57.233 36.000 2.79 0.00 0.00 2.12
4366 6248 8.865244 AGGGGGAAGAAAATGTTACTAGTATA 57.135 34.615 2.79 0.00 0.00 1.47
4367 6249 9.287818 AGGGGGAAGAAAATGTTACTAGTATAA 57.712 33.333 2.79 0.00 0.00 0.98
4368 6250 9.910267 GGGGGAAGAAAATGTTACTAGTATAAA 57.090 33.333 2.79 0.00 0.00 1.40
4378 6260 9.601217 AATGTTACTAGTATAAACCTTGCTCTG 57.399 33.333 2.79 0.00 0.00 3.35
4379 6261 7.553334 TGTTACTAGTATAAACCTTGCTCTGG 58.447 38.462 2.79 0.00 0.00 3.86
4380 6262 7.179694 TGTTACTAGTATAAACCTTGCTCTGGT 59.820 37.037 2.79 0.00 39.91 4.00
4382 6264 7.729124 ACTAGTATAAACCTTGCTCTGGTTA 57.271 36.000 0.00 0.00 45.99 2.85
4383 6265 8.320338 ACTAGTATAAACCTTGCTCTGGTTAT 57.680 34.615 0.00 3.17 45.99 1.89
4384 6266 9.430399 ACTAGTATAAACCTTGCTCTGGTTATA 57.570 33.333 0.00 2.36 45.99 0.98
4387 6269 9.969001 AGTATAAACCTTGCTCTGGTTATAAAA 57.031 29.630 8.53 0.00 45.99 1.52
4419 6301 1.701847 ACCTTGCTCTGGTCTTGTGAT 59.298 47.619 0.00 0.00 31.03 3.06
4455 6345 5.048364 TGTTGCACAAGTGAACAAGTTAGTT 60.048 36.000 4.04 0.00 32.19 2.24
4472 6362 8.745837 CAAGTTAGTTTGTGACATGTTTCATTC 58.254 33.333 0.00 0.02 0.00 2.67
4475 6365 5.510671 AGTTTGTGACATGTTTCATTCGTC 58.489 37.500 0.00 0.00 0.00 4.20
4496 6386 2.221749 CGGAACAGTCATGAGTGTGTTG 59.778 50.000 31.70 21.03 43.66 3.33
4504 6394 1.135888 CATGAGTGTGTTGCATGGACG 60.136 52.381 0.00 0.00 36.61 4.79
4505 6395 1.207593 GAGTGTGTTGCATGGACGC 59.792 57.895 0.00 0.00 0.00 5.19
4506 6396 1.227943 AGTGTGTTGCATGGACGCT 60.228 52.632 0.00 2.04 0.00 5.07
4507 6397 1.081906 GTGTGTTGCATGGACGCTG 60.082 57.895 0.00 0.00 0.00 5.18
4508 6398 2.126734 GTGTTGCATGGACGCTGC 60.127 61.111 0.00 0.00 40.10 5.25
4509 6399 3.725459 TGTTGCATGGACGCTGCG 61.725 61.111 21.91 21.91 42.62 5.18
4514 6404 2.509111 CATGGACGCTGCGCTGTA 60.509 61.111 23.51 6.65 0.00 2.74
4515 6405 2.509336 ATGGACGCTGCGCTGTAC 60.509 61.111 23.51 9.51 0.00 2.90
4516 6406 3.295304 ATGGACGCTGCGCTGTACA 62.295 57.895 23.51 14.82 32.67 2.90
4517 6407 2.509336 GGACGCTGCGCTGTACAT 60.509 61.111 23.51 0.00 0.00 2.29
4518 6408 2.697425 GACGCTGCGCTGTACATG 59.303 61.111 23.51 0.00 0.00 3.21
4519 6409 2.802667 GACGCTGCGCTGTACATGG 61.803 63.158 23.51 0.00 0.00 3.66
4520 6410 2.815211 CGCTGCGCTGTACATGGT 60.815 61.111 9.88 0.00 0.00 3.55
4521 6411 2.802667 CGCTGCGCTGTACATGGTC 61.803 63.158 9.88 0.00 0.00 4.02
4522 6412 2.464459 GCTGCGCTGTACATGGTCC 61.464 63.158 16.05 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.782222 GGTGGCTCCGTCGCATCTA 61.782 63.158 0.00 0.00 0.00 1.98
243 247 1.300963 GGATGAGTTGGCTGGAGCA 59.699 57.895 0.20 0.00 44.36 4.26
245 249 2.205022 TTTGGATGAGTTGGCTGGAG 57.795 50.000 0.00 0.00 0.00 3.86
246 250 2.158475 ACTTTTGGATGAGTTGGCTGGA 60.158 45.455 0.00 0.00 0.00 3.86
248 252 2.229784 GGACTTTTGGATGAGTTGGCTG 59.770 50.000 0.00 0.00 0.00 4.85
249 253 2.158475 TGGACTTTTGGATGAGTTGGCT 60.158 45.455 0.00 0.00 0.00 4.75
251 255 4.342092 AGTTTGGACTTTTGGATGAGTTGG 59.658 41.667 0.00 0.00 29.87 3.77
252 256 5.520376 AGTTTGGACTTTTGGATGAGTTG 57.480 39.130 0.00 0.00 29.87 3.16
253 257 7.255942 CCATTAGTTTGGACTTTTGGATGAGTT 60.256 37.037 0.00 0.00 38.23 3.01
255 259 6.434028 TCCATTAGTTTGGACTTTTGGATGAG 59.566 38.462 6.23 0.00 40.90 2.90
256 260 6.310941 TCCATTAGTTTGGACTTTTGGATGA 58.689 36.000 6.23 0.00 40.90 2.92
258 262 5.716703 CCTCCATTAGTTTGGACTTTTGGAT 59.283 40.000 9.27 0.00 41.24 3.41
259 263 5.076873 CCTCCATTAGTTTGGACTTTTGGA 58.923 41.667 8.77 8.77 40.90 3.53
261 265 5.076873 TCCCTCCATTAGTTTGGACTTTTG 58.923 41.667 0.00 0.00 40.90 2.44
262 266 5.325239 CTCCCTCCATTAGTTTGGACTTTT 58.675 41.667 0.00 0.00 40.90 2.27
263 267 4.263949 CCTCCCTCCATTAGTTTGGACTTT 60.264 45.833 0.00 0.00 40.90 2.66
264 268 3.267031 CCTCCCTCCATTAGTTTGGACTT 59.733 47.826 0.00 0.00 40.90 3.01
265 269 2.846827 CCTCCCTCCATTAGTTTGGACT 59.153 50.000 0.00 0.00 40.90 3.85
267 271 1.564348 GCCTCCCTCCATTAGTTTGGA 59.436 52.381 0.00 0.00 43.56 3.53
268 272 1.747206 CGCCTCCCTCCATTAGTTTGG 60.747 57.143 0.00 0.00 38.18 3.28
269 273 1.668419 CGCCTCCCTCCATTAGTTTG 58.332 55.000 0.00 0.00 0.00 2.93
270 274 0.546598 CCGCCTCCCTCCATTAGTTT 59.453 55.000 0.00 0.00 0.00 2.66
271 275 1.345715 CCCGCCTCCCTCCATTAGTT 61.346 60.000 0.00 0.00 0.00 2.24
272 276 1.766461 CCCGCCTCCCTCCATTAGT 60.766 63.158 0.00 0.00 0.00 2.24
273 277 3.151906 CCCGCCTCCCTCCATTAG 58.848 66.667 0.00 0.00 0.00 1.73
278 282 1.198759 TATATTGCCCGCCTCCCTCC 61.199 60.000 0.00 0.00 0.00 4.30
286 290 4.537015 GAGTGTTGAAATATATTGCCCGC 58.463 43.478 0.00 0.00 0.00 6.13
287 291 4.023193 GGGAGTGTTGAAATATATTGCCCG 60.023 45.833 0.00 0.00 0.00 6.13
289 293 4.280929 GGGGGAGTGTTGAAATATATTGCC 59.719 45.833 0.00 0.00 0.00 4.52
292 296 6.365520 GTGAGGGGGAGTGTTGAAATATATT 58.634 40.000 0.00 0.00 0.00 1.28
293 297 5.454755 CGTGAGGGGGAGTGTTGAAATATAT 60.455 44.000 0.00 0.00 0.00 0.86
295 299 3.370527 CGTGAGGGGGAGTGTTGAAATAT 60.371 47.826 0.00 0.00 0.00 1.28
296 300 2.027561 CGTGAGGGGGAGTGTTGAAATA 60.028 50.000 0.00 0.00 0.00 1.40
297 301 1.271379 CGTGAGGGGGAGTGTTGAAAT 60.271 52.381 0.00 0.00 0.00 2.17
298 302 0.107831 CGTGAGGGGGAGTGTTGAAA 59.892 55.000 0.00 0.00 0.00 2.69
299 303 1.052124 ACGTGAGGGGGAGTGTTGAA 61.052 55.000 0.00 0.00 0.00 2.69
300 304 1.458777 ACGTGAGGGGGAGTGTTGA 60.459 57.895 0.00 0.00 0.00 3.18
302 306 0.113776 TAGACGTGAGGGGGAGTGTT 59.886 55.000 0.00 0.00 0.00 3.32
304 308 1.038130 CCTAGACGTGAGGGGGAGTG 61.038 65.000 0.00 0.00 0.00 3.51
305 309 1.306970 CCTAGACGTGAGGGGGAGT 59.693 63.158 0.00 0.00 0.00 3.85
306 310 2.128507 GCCTAGACGTGAGGGGGAG 61.129 68.421 13.64 0.00 34.35 4.30
307 311 1.284111 TAGCCTAGACGTGAGGGGGA 61.284 60.000 13.64 0.00 34.35 4.81
309 313 1.705873 AATAGCCTAGACGTGAGGGG 58.294 55.000 13.64 2.79 34.35 4.79
310 314 3.821421 AAAATAGCCTAGACGTGAGGG 57.179 47.619 13.64 4.42 34.35 4.30
312 316 5.299782 AGGACTAAAATAGCCTAGACGTGAG 59.700 44.000 0.00 0.00 32.84 3.51
313 317 5.198965 AGGACTAAAATAGCCTAGACGTGA 58.801 41.667 0.00 0.00 32.84 4.35
316 320 7.361894 GTCTAAGGACTAAAATAGCCTAGACG 58.638 42.308 0.00 0.00 39.24 4.18
317 321 7.013178 ACGTCTAAGGACTAAAATAGCCTAGAC 59.987 40.741 0.00 0.00 40.10 2.59
319 323 7.140048 CACGTCTAAGGACTAAAATAGCCTAG 58.860 42.308 0.00 0.00 40.10 3.02
320 324 6.040166 CCACGTCTAAGGACTAAAATAGCCTA 59.960 42.308 0.00 0.00 40.10 3.93
321 325 5.163437 CCACGTCTAAGGACTAAAATAGCCT 60.163 44.000 0.00 0.00 40.10 4.58
322 326 5.048507 CCACGTCTAAGGACTAAAATAGCC 58.951 45.833 0.00 0.00 40.10 3.93
323 327 5.048507 CCCACGTCTAAGGACTAAAATAGC 58.951 45.833 0.00 0.00 40.10 2.97
324 328 6.461110 TCCCACGTCTAAGGACTAAAATAG 57.539 41.667 0.00 0.00 40.10 1.73
325 329 6.238842 CGATCCCACGTCTAAGGACTAAAATA 60.239 42.308 0.00 0.00 40.10 1.40
326 330 5.451520 CGATCCCACGTCTAAGGACTAAAAT 60.452 44.000 0.00 0.00 40.10 1.82
327 331 4.142315 CGATCCCACGTCTAAGGACTAAAA 60.142 45.833 0.00 0.00 40.10 1.52
328 332 3.379372 CGATCCCACGTCTAAGGACTAAA 59.621 47.826 0.00 0.00 40.10 1.85
330 334 2.171237 TCGATCCCACGTCTAAGGACTA 59.829 50.000 0.00 0.00 40.10 2.59
331 335 1.064906 TCGATCCCACGTCTAAGGACT 60.065 52.381 0.00 0.00 40.10 3.85
332 336 1.386533 TCGATCCCACGTCTAAGGAC 58.613 55.000 0.00 0.00 38.97 3.85
334 338 1.681793 ACATCGATCCCACGTCTAAGG 59.318 52.381 0.00 0.00 34.70 2.69
337 341 2.501261 CCTACATCGATCCCACGTCTA 58.499 52.381 0.00 0.00 34.70 2.59
338 342 1.319541 CCTACATCGATCCCACGTCT 58.680 55.000 0.00 0.00 34.70 4.18
339 343 0.318784 GCCTACATCGATCCCACGTC 60.319 60.000 0.00 0.00 34.70 4.34
340 344 1.740285 GCCTACATCGATCCCACGT 59.260 57.895 0.00 0.00 34.70 4.49
342 346 1.006102 CGGCCTACATCGATCCCAC 60.006 63.158 0.00 0.00 0.00 4.61
343 347 2.867855 GCGGCCTACATCGATCCCA 61.868 63.158 0.00 0.00 0.00 4.37
345 349 1.373497 CTGCGGCCTACATCGATCC 60.373 63.158 0.00 0.00 0.00 3.36
346 350 0.387878 CTCTGCGGCCTACATCGATC 60.388 60.000 0.00 0.00 0.00 3.69
347 351 1.109920 ACTCTGCGGCCTACATCGAT 61.110 55.000 0.00 0.00 0.00 3.59
354 472 0.889994 TAAAACGACTCTGCGGCCTA 59.110 50.000 0.00 0.00 35.12 3.93
359 477 6.623743 GCAGTATTAAATAAAACGACTCTGCG 59.376 38.462 0.00 0.00 35.10 5.18
362 480 7.823149 ACGCAGTATTAAATAAAACGACTCT 57.177 32.000 0.00 0.00 41.94 3.24
366 484 6.022821 GCCAACGCAGTATTAAATAAAACGA 58.977 36.000 0.00 0.00 45.00 3.85
382 500 2.594303 CAAGACCCTGCCAACGCA 60.594 61.111 0.00 0.00 44.78 5.24
384 502 0.535102 AGTTCAAGACCCTGCCAACG 60.535 55.000 0.00 0.00 0.00 4.10
385 503 1.239347 GAGTTCAAGACCCTGCCAAC 58.761 55.000 0.00 0.00 0.00 3.77
386 504 0.843309 TGAGTTCAAGACCCTGCCAA 59.157 50.000 0.00 0.00 0.00 4.52
387 505 0.843309 TTGAGTTCAAGACCCTGCCA 59.157 50.000 0.00 0.00 0.00 4.92
388 506 3.725754 TTGAGTTCAAGACCCTGCC 57.274 52.632 0.00 0.00 0.00 4.85
396 514 4.583871 AGCCAATAGGTCTTGAGTTCAAG 58.416 43.478 14.28 14.28 43.95 3.02
397 515 4.579869 GAGCCAATAGGTCTTGAGTTCAA 58.420 43.478 0.00 0.00 40.01 2.69
398 516 3.368427 CGAGCCAATAGGTCTTGAGTTCA 60.368 47.826 0.00 0.00 41.03 3.18
399 517 3.190874 CGAGCCAATAGGTCTTGAGTTC 58.809 50.000 0.00 0.00 41.03 3.01
400 518 2.093447 CCGAGCCAATAGGTCTTGAGTT 60.093 50.000 0.00 0.00 41.03 3.01
401 519 1.482593 CCGAGCCAATAGGTCTTGAGT 59.517 52.381 0.00 0.00 41.03 3.41
403 521 1.860641 TCCGAGCCAATAGGTCTTGA 58.139 50.000 0.00 0.00 41.03 3.02
404 522 2.918712 ATCCGAGCCAATAGGTCTTG 57.081 50.000 0.00 0.00 41.03 3.02
405 523 2.633481 GGTATCCGAGCCAATAGGTCTT 59.367 50.000 0.00 0.00 41.03 3.01
408 526 2.097110 TGGTATCCGAGCCAATAGGT 57.903 50.000 0.00 0.00 37.19 3.08
409 527 5.104941 TCAATATGGTATCCGAGCCAATAGG 60.105 44.000 0.00 0.00 38.38 2.57
410 528 5.977635 TCAATATGGTATCCGAGCCAATAG 58.022 41.667 0.00 0.00 38.38 1.73
411 529 6.170506 GTTCAATATGGTATCCGAGCCAATA 58.829 40.000 0.00 0.00 38.38 1.90
412 530 4.908601 TCAATATGGTATCCGAGCCAAT 57.091 40.909 0.00 0.00 38.38 3.16
413 531 4.385825 GTTCAATATGGTATCCGAGCCAA 58.614 43.478 0.00 0.00 38.38 4.52
417 535 6.935741 TTTTGGTTCAATATGGTATCCGAG 57.064 37.500 0.00 0.00 0.00 4.63
438 597 1.686052 TCGAGCAGTTGCCCAAAATTT 59.314 42.857 0.00 0.00 43.38 1.82
442 601 1.153066 TGTCGAGCAGTTGCCCAAA 60.153 52.632 0.00 0.00 43.38 3.28
613 904 3.108881 CTCCGACATACACATCGACTTG 58.891 50.000 0.00 0.00 40.86 3.16
630 921 2.202492 CCACGAGAAGCGACTCCG 60.202 66.667 0.00 0.00 44.57 4.63
637 928 2.049063 AGCACGTCCACGAGAAGC 60.049 61.111 6.03 4.55 43.02 3.86
668 959 7.278868 CGAGTTTTAATCTCTAGAAGGCAACAT 59.721 37.037 0.00 0.00 41.41 2.71
669 960 6.590292 CGAGTTTTAATCTCTAGAAGGCAACA 59.410 38.462 0.00 0.00 41.41 3.33
670 961 6.812160 TCGAGTTTTAATCTCTAGAAGGCAAC 59.188 38.462 0.00 0.00 0.00 4.17
671 962 6.931838 TCGAGTTTTAATCTCTAGAAGGCAA 58.068 36.000 0.00 0.00 0.00 4.52
673 964 7.168469 GTCATCGAGTTTTAATCTCTAGAAGGC 59.832 40.741 0.00 0.00 0.00 4.35
674 965 7.377397 CGTCATCGAGTTTTAATCTCTAGAAGG 59.623 40.741 0.00 0.00 39.71 3.46
675 966 7.377397 CCGTCATCGAGTTTTAATCTCTAGAAG 59.623 40.741 0.00 0.00 39.71 2.85
676 967 7.066645 TCCGTCATCGAGTTTTAATCTCTAGAA 59.933 37.037 0.00 0.00 39.71 2.10
677 968 6.541278 TCCGTCATCGAGTTTTAATCTCTAGA 59.459 38.462 0.00 0.00 39.71 2.43
678 969 6.726230 TCCGTCATCGAGTTTTAATCTCTAG 58.274 40.000 0.00 0.00 39.71 2.43
679 970 6.688637 TCCGTCATCGAGTTTTAATCTCTA 57.311 37.500 0.00 0.00 39.71 2.43
680 971 5.578005 TCCGTCATCGAGTTTTAATCTCT 57.422 39.130 0.00 0.00 39.71 3.10
681 972 4.207429 GCTCCGTCATCGAGTTTTAATCTC 59.793 45.833 0.00 0.00 39.71 2.75
739 1193 7.439655 ACTCTTGACGCTTTCCTAATCATAATC 59.560 37.037 0.00 0.00 0.00 1.75
740 1194 7.275920 ACTCTTGACGCTTTCCTAATCATAAT 58.724 34.615 0.00 0.00 0.00 1.28
741 1195 6.640518 ACTCTTGACGCTTTCCTAATCATAA 58.359 36.000 0.00 0.00 0.00 1.90
742 1196 6.222038 ACTCTTGACGCTTTCCTAATCATA 57.778 37.500 0.00 0.00 0.00 2.15
746 1227 3.260884 TGGACTCTTGACGCTTTCCTAAT 59.739 43.478 0.00 0.00 0.00 1.73
756 1237 9.995957 CTAATAGTATATCATGGACTCTTGACG 57.004 37.037 0.00 0.00 31.23 4.35
774 1255 9.982651 GATCATGGACTAGCAAAACTAATAGTA 57.017 33.333 0.00 0.00 0.00 1.82
775 1256 8.486210 TGATCATGGACTAGCAAAACTAATAGT 58.514 33.333 0.00 0.00 0.00 2.12
776 1257 8.893219 TGATCATGGACTAGCAAAACTAATAG 57.107 34.615 0.00 0.00 0.00 1.73
777 1258 7.933577 CCTGATCATGGACTAGCAAAACTAATA 59.066 37.037 0.00 0.00 0.00 0.98
792 1273 1.407299 CGGAAGCAACCTGATCATGGA 60.407 52.381 15.51 0.00 0.00 3.41
793 1274 1.019673 CGGAAGCAACCTGATCATGG 58.980 55.000 0.00 2.61 0.00 3.66
797 1278 3.502572 GCCGGAAGCAACCTGATC 58.497 61.111 5.05 0.00 42.97 2.92
833 1314 0.734889 ACACGCGCGTACCTATACTT 59.265 50.000 37.24 5.61 0.00 2.24
840 1321 1.705337 TAGACCTACACGCGCGTACC 61.705 60.000 37.24 19.35 0.00 3.34
885 1370 1.597663 CAACCAAGACTCACGACCAAC 59.402 52.381 0.00 0.00 0.00 3.77
886 1371 1.948104 CAACCAAGACTCACGACCAA 58.052 50.000 0.00 0.00 0.00 3.67
887 1372 0.531974 GCAACCAAGACTCACGACCA 60.532 55.000 0.00 0.00 0.00 4.02
888 1373 1.228657 GGCAACCAAGACTCACGACC 61.229 60.000 0.00 0.00 0.00 4.79
889 1374 1.557443 CGGCAACCAAGACTCACGAC 61.557 60.000 0.00 0.00 0.00 4.34
890 1375 1.300620 CGGCAACCAAGACTCACGA 60.301 57.895 0.00 0.00 0.00 4.35
891 1376 2.317609 CCGGCAACCAAGACTCACG 61.318 63.158 0.00 0.00 0.00 4.35
892 1377 0.321653 ATCCGGCAACCAAGACTCAC 60.322 55.000 0.00 0.00 0.00 3.51
893 1378 1.271856 TATCCGGCAACCAAGACTCA 58.728 50.000 0.00 0.00 0.00 3.41
894 1379 2.213499 CATATCCGGCAACCAAGACTC 58.787 52.381 0.00 0.00 0.00 3.36
895 1380 1.559682 ACATATCCGGCAACCAAGACT 59.440 47.619 0.00 0.00 0.00 3.24
896 1381 2.038387 ACATATCCGGCAACCAAGAC 57.962 50.000 0.00 0.00 0.00 3.01
897 1382 3.135712 ACATACATATCCGGCAACCAAGA 59.864 43.478 0.00 0.00 0.00 3.02
898 1383 3.476552 ACATACATATCCGGCAACCAAG 58.523 45.455 0.00 0.00 0.00 3.61
899 1384 3.569194 ACATACATATCCGGCAACCAA 57.431 42.857 0.00 0.00 0.00 3.67
900 1385 3.388350 TGTACATACATATCCGGCAACCA 59.612 43.478 0.00 0.00 0.00 3.67
901 1386 3.994392 CTGTACATACATATCCGGCAACC 59.006 47.826 0.00 0.00 35.36 3.77
921 1406 5.332055 CGTCGTGGTTTTAGTTCAACTACTG 60.332 44.000 0.00 0.00 34.39 2.74
922 1407 4.741676 CGTCGTGGTTTTAGTTCAACTACT 59.258 41.667 0.00 0.00 34.39 2.57
923 1408 4.739716 TCGTCGTGGTTTTAGTTCAACTAC 59.260 41.667 0.00 0.00 33.48 2.73
924 1409 4.930963 TCGTCGTGGTTTTAGTTCAACTA 58.069 39.130 0.00 0.00 0.00 2.24
925 1410 3.784338 TCGTCGTGGTTTTAGTTCAACT 58.216 40.909 0.00 0.00 0.00 3.16
926 1411 3.553105 ACTCGTCGTGGTTTTAGTTCAAC 59.447 43.478 0.00 0.00 0.00 3.18
927 1412 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
928 1413 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
929 1414 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
930 1415 6.479660 TCAAATTACTCGTCGTGGTTTTAGTT 59.520 34.615 0.00 0.00 0.00 2.24
931 1416 5.984926 TCAAATTACTCGTCGTGGTTTTAGT 59.015 36.000 0.00 0.00 0.00 2.24
932 1417 6.456447 TCAAATTACTCGTCGTGGTTTTAG 57.544 37.500 0.00 0.00 0.00 1.85
933 1418 6.841443 TTCAAATTACTCGTCGTGGTTTTA 57.159 33.333 0.00 0.00 0.00 1.52
934 1419 5.738118 TTCAAATTACTCGTCGTGGTTTT 57.262 34.783 0.00 0.00 0.00 2.43
935 1420 5.504392 GTTTCAAATTACTCGTCGTGGTTT 58.496 37.500 0.00 0.00 0.00 3.27
936 1421 4.318263 CGTTTCAAATTACTCGTCGTGGTT 60.318 41.667 0.00 0.00 0.00 3.67
937 1422 3.182972 CGTTTCAAATTACTCGTCGTGGT 59.817 43.478 0.00 0.00 0.00 4.16
938 1423 3.422603 CCGTTTCAAATTACTCGTCGTGG 60.423 47.826 0.00 0.00 0.00 4.94
939 1424 3.426191 TCCGTTTCAAATTACTCGTCGTG 59.574 43.478 0.00 0.00 0.00 4.35
940 1425 3.641648 TCCGTTTCAAATTACTCGTCGT 58.358 40.909 0.00 0.00 0.00 4.34
941 1426 3.060363 CCTCCGTTTCAAATTACTCGTCG 59.940 47.826 0.00 0.00 0.00 5.12
942 1427 4.240096 TCCTCCGTTTCAAATTACTCGTC 58.760 43.478 0.00 0.00 0.00 4.20
943 1428 4.261578 TCCTCCGTTTCAAATTACTCGT 57.738 40.909 0.00 0.00 0.00 4.18
944 1429 4.689345 ACTTCCTCCGTTTCAAATTACTCG 59.311 41.667 0.00 0.00 0.00 4.18
945 1430 7.845066 ATACTTCCTCCGTTTCAAATTACTC 57.155 36.000 0.00 0.00 0.00 2.59
949 1434 9.847224 ATGTATATACTTCCTCCGTTTCAAATT 57.153 29.630 13.89 0.00 0.00 1.82
953 1438 9.754382 GTTTATGTATATACTTCCTCCGTTTCA 57.246 33.333 13.89 0.00 0.00 2.69
954 1439 9.754382 TGTTTATGTATATACTTCCTCCGTTTC 57.246 33.333 13.89 0.00 0.00 2.78
955 1440 9.760077 CTGTTTATGTATATACTTCCTCCGTTT 57.240 33.333 13.89 0.00 0.00 3.60
956 1441 7.871463 GCTGTTTATGTATATACTTCCTCCGTT 59.129 37.037 13.89 0.00 0.00 4.44
957 1442 7.376615 GCTGTTTATGTATATACTTCCTCCGT 58.623 38.462 13.89 0.00 0.00 4.69
958 1443 6.812160 GGCTGTTTATGTATATACTTCCTCCG 59.188 42.308 13.89 0.41 0.00 4.63
959 1444 7.676947 TGGCTGTTTATGTATATACTTCCTCC 58.323 38.462 13.89 5.93 0.00 4.30
960 1445 7.819900 CCTGGCTGTTTATGTATATACTTCCTC 59.180 40.741 13.89 3.47 0.00 3.71
961 1446 7.292591 ACCTGGCTGTTTATGTATATACTTCCT 59.707 37.037 13.89 0.00 0.00 3.36
962 1447 7.450903 ACCTGGCTGTTTATGTATATACTTCC 58.549 38.462 13.89 5.07 0.00 3.46
963 1448 9.640963 CTACCTGGCTGTTTATGTATATACTTC 57.359 37.037 13.89 0.00 0.00 3.01
964 1449 9.375974 TCTACCTGGCTGTTTATGTATATACTT 57.624 33.333 13.89 10.05 0.00 2.24
965 1450 8.804204 GTCTACCTGGCTGTTTATGTATATACT 58.196 37.037 13.89 2.84 0.00 2.12
966 1451 8.033626 GGTCTACCTGGCTGTTTATGTATATAC 58.966 40.741 5.89 5.89 0.00 1.47
977 1462 2.834113 ACTATGGTCTACCTGGCTGTT 58.166 47.619 0.02 0.00 36.82 3.16
1010 1499 2.820197 GTGTTTCAGATCTTTCCCCACC 59.180 50.000 0.00 0.00 0.00 4.61
1096 1607 4.335647 CAGCGCTGGAGGTTGGGT 62.336 66.667 29.88 0.00 0.00 4.51
1126 1664 2.486592 TGCAAGATGAAGTCGACGAGTA 59.513 45.455 10.46 0.00 0.00 2.59
1160 1698 0.250901 ATAGCATCCGATGGCCCAAC 60.251 55.000 10.41 0.00 0.00 3.77
1185 1723 5.391950 CGTTGGATGTTTTCAGGGAATGTAG 60.392 44.000 0.00 0.00 0.00 2.74
1224 1762 2.283529 GGTTGGAGCAGACGGAGGA 61.284 63.158 0.00 0.00 0.00 3.71
1239 1777 3.334054 GAGCTCCCTGGCCTGGTT 61.334 66.667 25.58 9.54 0.00 3.67
1316 1854 3.499737 GGGTTGCGCTCATGGTCG 61.500 66.667 9.73 0.00 0.00 4.79
1359 1897 2.159028 CCGTGGAAAGATTCTCCTCCTC 60.159 54.545 13.28 9.92 33.77 3.71
1363 1901 1.952621 TCCCGTGGAAAGATTCTCCT 58.047 50.000 0.00 0.00 33.77 3.69
1364 1902 3.283259 AATCCCGTGGAAAGATTCTCC 57.717 47.619 0.00 0.00 34.34 3.71
1365 1903 4.518249 AGAAATCCCGTGGAAAGATTCTC 58.482 43.478 0.00 0.00 34.34 2.87
1366 1904 4.576330 AGAAATCCCGTGGAAAGATTCT 57.424 40.909 0.00 3.39 34.34 2.40
1367 1905 6.753107 TTTAGAAATCCCGTGGAAAGATTC 57.247 37.500 0.00 1.53 34.34 2.52
1421 1959 1.134670 GCCAGCTCCTTCTCGTAATGT 60.135 52.381 0.00 0.00 0.00 2.71
1448 1992 2.851195 TCCTCTTCTTCTGCAACAACC 58.149 47.619 0.00 0.00 0.00 3.77
1475 2019 0.030705 CCTCCTTGGGATCCTCCTCA 60.031 60.000 12.58 0.00 36.57 3.86
1488 2032 1.003233 GAACGTCATCCCAACCTCCTT 59.997 52.381 0.00 0.00 0.00 3.36
1510 2054 0.179150 CTCCTTCTTCACGAGCTCGG 60.179 60.000 36.93 25.75 44.95 4.63
1652 2199 3.842925 GAAGCCACCGCACCTTCCA 62.843 63.158 0.00 0.00 37.52 3.53
1749 2304 7.822658 AGACGTATATAGATCAAGAAGAAGGC 58.177 38.462 0.00 0.00 0.00 4.35
1750 2305 9.226606 AGAGACGTATATAGATCAAGAAGAAGG 57.773 37.037 0.00 0.00 0.00 3.46
1833 2392 8.134905 TCTTCTTGAGTTTACCTTCGTTTTAC 57.865 34.615 0.00 0.00 0.00 2.01
1835 2394 7.803279 ATCTTCTTGAGTTTACCTTCGTTTT 57.197 32.000 0.00 0.00 0.00 2.43
1836 2395 8.148999 AGTATCTTCTTGAGTTTACCTTCGTTT 58.851 33.333 0.00 0.00 0.00 3.60
1837 2396 7.668492 AGTATCTTCTTGAGTTTACCTTCGTT 58.332 34.615 0.00 0.00 0.00 3.85
1838 2397 7.229581 AGTATCTTCTTGAGTTTACCTTCGT 57.770 36.000 0.00 0.00 0.00 3.85
1839 2398 6.752815 GGAGTATCTTCTTGAGTTTACCTTCG 59.247 42.308 0.00 0.00 33.73 3.79
1909 2512 3.679025 CGCCACTTTATAAACACGTGGTA 59.321 43.478 24.80 11.97 45.24 3.25
1913 2516 3.391965 TGTCGCCACTTTATAAACACGT 58.608 40.909 0.00 0.00 0.00 4.49
1916 2519 4.056740 TCGTTGTCGCCACTTTATAAACA 58.943 39.130 0.00 0.00 36.96 2.83
1917 2520 4.650545 TCGTTGTCGCCACTTTATAAAC 57.349 40.909 0.00 0.00 36.96 2.01
1924 2528 1.463444 GCTTAATCGTTGTCGCCACTT 59.537 47.619 0.00 0.00 36.96 3.16
1941 2545 6.588719 TGGTTGAGCTATTATTGTTTGCTT 57.411 33.333 0.00 0.00 33.83 3.91
1956 2560 6.691508 ACAATAGAAAGGAAATTGGTTGAGC 58.308 36.000 0.00 0.00 35.40 4.26
1977 2581 4.071423 AGCATGCATGTGTACTTGTACAA 58.929 39.130 26.79 8.28 0.00 2.41
2035 2643 5.722021 AATTAAACATTTCTGCCGTTCCT 57.278 34.783 0.00 0.00 0.00 3.36
2040 2648 4.922692 TGAGCAAATTAAACATTTCTGCCG 59.077 37.500 0.00 0.00 0.00 5.69
2520 3141 1.346365 TAGCAACAATCGCACGAGAC 58.654 50.000 0.00 0.00 0.00 3.36
2817 3438 2.357637 GTCAAGCAACACAACTTGCCTA 59.642 45.455 0.32 0.00 46.63 3.93
2949 3570 1.135199 GCAATCCCGTGACGAGACTTA 60.135 52.381 6.54 0.00 0.00 2.24
2962 3583 1.468914 GTGAACCTTTCGAGCAATCCC 59.531 52.381 0.00 0.00 0.00 3.85
2978 3599 5.295540 TGTTGAACATCGAAGTCAATGTGAA 59.704 36.000 10.73 0.00 36.28 3.18
3112 3733 1.065491 CCACCTTACTACATGGCTGCA 60.065 52.381 0.50 0.00 0.00 4.41
3129 3750 7.843490 TTAGTTTGACATCTTACATAGCCAC 57.157 36.000 0.00 0.00 0.00 5.01
3154 3781 5.413523 TGCTAGACTAGACGATACACAACAA 59.586 40.000 13.91 0.00 0.00 2.83
3194 3829 6.154203 TCAGCACCAAGATGAGTAGATAAG 57.846 41.667 0.00 0.00 37.82 1.73
3450 4098 2.120232 CACAAACATACGCCGCAAAAA 58.880 42.857 0.00 0.00 0.00 1.94
3451 4099 1.759994 CACAAACATACGCCGCAAAA 58.240 45.000 0.00 0.00 0.00 2.44
3452 4100 0.661780 GCACAAACATACGCCGCAAA 60.662 50.000 0.00 0.00 0.00 3.68
3453 4101 1.081774 GCACAAACATACGCCGCAA 60.082 52.632 0.00 0.00 0.00 4.85
3454 4102 1.786049 TTGCACAAACATACGCCGCA 61.786 50.000 0.00 0.00 0.00 5.69
3455 4103 1.081774 TTGCACAAACATACGCCGC 60.082 52.632 0.00 0.00 0.00 6.53
3456 4104 0.237235 AGTTGCACAAACATACGCCG 59.763 50.000 0.00 0.00 41.61 6.46
3457 4105 1.724654 CGAGTTGCACAAACATACGCC 60.725 52.381 0.00 0.00 41.61 5.68
3458 4106 1.070175 ACGAGTTGCACAAACATACGC 60.070 47.619 0.00 0.00 41.61 4.42
3459 4107 2.941891 ACGAGTTGCACAAACATACG 57.058 45.000 0.00 0.00 41.61 3.06
3460 4108 5.277601 ACATACGAGTTGCACAAACATAC 57.722 39.130 0.00 0.00 41.61 2.39
3461 4109 6.592220 ACATACATACGAGTTGCACAAACATA 59.408 34.615 0.00 0.00 41.61 2.29
3462 4110 5.411361 ACATACATACGAGTTGCACAAACAT 59.589 36.000 0.00 0.00 41.61 2.71
3463 4111 4.752604 ACATACATACGAGTTGCACAAACA 59.247 37.500 0.00 0.00 41.61 2.83
3464 4112 5.277601 ACATACATACGAGTTGCACAAAC 57.722 39.130 0.00 0.00 39.24 2.93
3521 4169 4.155826 TGACATCCGATTTGAAGCGAAAAT 59.844 37.500 2.62 0.00 40.84 1.82
3522 4170 3.500299 TGACATCCGATTTGAAGCGAAAA 59.500 39.130 2.62 0.00 40.84 2.29
3523 4171 3.070748 TGACATCCGATTTGAAGCGAAA 58.929 40.909 2.62 0.00 40.84 3.46
3524 4172 2.694213 TGACATCCGATTTGAAGCGAA 58.306 42.857 2.62 0.00 40.84 4.70
3525 4173 2.378445 TGACATCCGATTTGAAGCGA 57.622 45.000 2.62 0.00 40.84 4.93
3526 4174 4.997905 ATATGACATCCGATTTGAAGCG 57.002 40.909 0.00 0.00 37.59 4.68
3527 4175 7.992180 AAAAATATGACATCCGATTTGAAGC 57.008 32.000 0.00 0.00 0.00 3.86
3575 4223 2.241722 CAACATGTTCGATCAAACGCC 58.758 47.619 8.48 0.00 31.58 5.68
3578 4226 4.219033 GTCCACAACATGTTCGATCAAAC 58.781 43.478 8.48 0.00 0.00 2.93
3597 4245 2.999739 TTTCAACTCCACCGGCGTCC 63.000 60.000 6.01 0.00 0.00 4.79
3600 4248 2.325082 CCTTTCAACTCCACCGGCG 61.325 63.158 0.00 0.00 0.00 6.46
3616 4264 1.760875 ACATGTACCCCGCGATCCT 60.761 57.895 8.23 0.00 0.00 3.24
3620 4268 4.460683 GGCACATGTACCCCGCGA 62.461 66.667 8.23 0.00 0.00 5.87
3674 4322 2.597510 GAAGGGCAAGGCAACGGT 60.598 61.111 0.00 0.00 46.39 4.83
3675 4323 3.373565 GGAAGGGCAAGGCAACGG 61.374 66.667 0.00 0.00 46.39 4.44
3709 4358 0.107703 CTGGCAGACGGGCTAAATCA 60.108 55.000 9.42 0.00 43.83 2.57
3710 4359 0.178068 TCTGGCAGACGGGCTAAATC 59.822 55.000 14.43 0.00 43.83 2.17
3726 4375 1.301293 GCTTCCTCCAACCCCTCTG 59.699 63.158 0.00 0.00 0.00 3.35
3727 4376 2.294078 CGCTTCCTCCAACCCCTCT 61.294 63.158 0.00 0.00 0.00 3.69
3801 4450 3.727258 CCCTTCCGACCATGGGCA 61.727 66.667 20.22 0.00 32.49 5.36
3827 4476 1.003839 GGCAACACGTCCTCCATGA 60.004 57.895 0.00 0.00 0.00 3.07
3849 4499 3.585856 CGGGGTGAAACGGAATGG 58.414 61.111 0.00 0.00 38.12 3.16
3868 4518 2.677228 CGCCAATCCCTTCCACCT 59.323 61.111 0.00 0.00 0.00 4.00
3888 4538 1.302033 CGGCCAACTTCTCTGCTGT 60.302 57.895 2.24 0.00 0.00 4.40
3889 4539 1.302033 ACGGCCAACTTCTCTGCTG 60.302 57.895 2.24 0.00 36.19 4.41
3890 4540 1.302033 CACGGCCAACTTCTCTGCT 60.302 57.895 2.24 0.00 0.00 4.24
3893 4543 1.831652 CTCCCACGGCCAACTTCTCT 61.832 60.000 2.24 0.00 0.00 3.10
3895 4545 1.841556 TCTCCCACGGCCAACTTCT 60.842 57.895 2.24 0.00 0.00 2.85
3915 4565 2.508526 GGTGTTGCCTTGAGATTCTGT 58.491 47.619 0.00 0.00 0.00 3.41
3917 4567 1.347707 TCGGTGTTGCCTTGAGATTCT 59.652 47.619 0.00 0.00 34.25 2.40
3921 4571 0.321564 CCATCGGTGTTGCCTTGAGA 60.322 55.000 0.00 0.00 34.25 3.27
3922 4572 1.308069 CCCATCGGTGTTGCCTTGAG 61.308 60.000 0.00 0.00 34.25 3.02
3924 4574 0.680921 ATCCCATCGGTGTTGCCTTG 60.681 55.000 0.00 0.00 34.25 3.61
3925 4575 0.394352 GATCCCATCGGTGTTGCCTT 60.394 55.000 0.00 0.00 34.25 4.35
3936 4586 0.604780 CATGCCTCACCGATCCCATC 60.605 60.000 0.00 0.00 0.00 3.51
3942 4592 1.271871 TGGTTTTCATGCCTCACCGAT 60.272 47.619 0.00 0.00 0.00 4.18
3945 4595 2.354003 CCATTGGTTTTCATGCCTCACC 60.354 50.000 0.00 0.00 0.00 4.02
3969 4619 3.391382 GGAGCACCCGTAGCCACT 61.391 66.667 0.00 0.00 0.00 4.00
4000 4650 2.516460 CGATCTCCTCGTCCCCGT 60.516 66.667 0.00 0.00 42.56 5.28
4009 4659 3.518998 CACCGCCGTCGATCTCCT 61.519 66.667 0.00 0.00 38.10 3.69
4021 4671 2.818274 CTTTCTACCCGCCACCGC 60.818 66.667 0.00 0.00 0.00 5.68
4022 4672 2.125269 CCTTTCTACCCGCCACCG 60.125 66.667 0.00 0.00 0.00 4.94
4023 4673 1.221021 CTCCTTTCTACCCGCCACC 59.779 63.158 0.00 0.00 0.00 4.61
4024 4674 1.449778 GCTCCTTTCTACCCGCCAC 60.450 63.158 0.00 0.00 0.00 5.01
4026 4676 1.153349 CAGCTCCTTTCTACCCGCC 60.153 63.158 0.00 0.00 0.00 6.13
4027 4677 0.249398 TTCAGCTCCTTTCTACCCGC 59.751 55.000 0.00 0.00 0.00 6.13
4032 5914 5.482908 GAGTGACATTTCAGCTCCTTTCTA 58.517 41.667 0.00 0.00 30.10 2.10
4042 5924 0.321564 TGGCGGGAGTGACATTTCAG 60.322 55.000 0.00 0.00 30.10 3.02
4099 5981 3.380004 TCCCACATATGTCCATTTTTCGC 59.620 43.478 5.07 0.00 0.00 4.70
4102 5984 4.640201 CGAGTCCCACATATGTCCATTTTT 59.360 41.667 5.07 0.00 0.00 1.94
4106 5988 2.630098 CTCGAGTCCCACATATGTCCAT 59.370 50.000 5.07 0.00 0.00 3.41
4117 5999 3.640029 GGTATATTCAACCTCGAGTCCCA 59.360 47.826 12.31 0.00 33.97 4.37
4119 6001 3.856267 GCGGTATATTCAACCTCGAGTCC 60.856 52.174 12.31 0.00 34.66 3.85
4120 6002 3.004524 AGCGGTATATTCAACCTCGAGTC 59.995 47.826 12.31 0.00 34.66 3.36
4122 6004 3.566523 GAGCGGTATATTCAACCTCGAG 58.433 50.000 5.13 5.13 34.66 4.04
4130 6012 1.348064 CCCAGGGAGCGGTATATTCA 58.652 55.000 0.00 0.00 0.00 2.57
4151 6033 3.303928 GTCCCGGAGATAGGCCCG 61.304 72.222 0.73 0.00 44.94 6.13
4187 6069 2.157085 GTCGTTTTAAGGTTCCAGAGCG 59.843 50.000 0.00 0.00 0.00 5.03
4199 6081 4.660352 CGGGAAATAACCGTCGTTTTAA 57.340 40.909 0.00 0.00 46.03 1.52
4209 6091 2.517638 CCGGCCCGGGAAATAACC 60.518 66.667 29.31 14.30 44.15 2.85
4219 6101 3.138128 GAAAACATCCCCGGCCCG 61.138 66.667 0.00 0.00 0.00 6.13
4220 6102 2.758327 GGAAAACATCCCCGGCCC 60.758 66.667 0.00 0.00 43.00 5.80
4221 6103 3.138128 CGGAAAACATCCCCGGCC 61.138 66.667 0.00 0.00 46.39 6.13
4224 6106 0.818040 GATCCCGGAAAACATCCCCG 60.818 60.000 0.73 0.00 46.39 5.73
4225 6107 0.257616 TGATCCCGGAAAACATCCCC 59.742 55.000 0.73 0.00 46.39 4.81
4226 6108 1.680338 CTGATCCCGGAAAACATCCC 58.320 55.000 0.73 0.00 46.39 3.85
4227 6109 1.025041 GCTGATCCCGGAAAACATCC 58.975 55.000 0.73 0.00 45.57 3.51
4228 6110 2.044123 AGCTGATCCCGGAAAACATC 57.956 50.000 0.73 0.00 0.00 3.06
4229 6111 2.771943 TCTAGCTGATCCCGGAAAACAT 59.228 45.455 0.73 0.00 0.00 2.71
4230 6112 2.168521 CTCTAGCTGATCCCGGAAAACA 59.831 50.000 0.73 0.00 0.00 2.83
4231 6113 2.431057 TCTCTAGCTGATCCCGGAAAAC 59.569 50.000 0.73 0.00 0.00 2.43
4232 6114 2.747177 TCTCTAGCTGATCCCGGAAAA 58.253 47.619 0.73 0.00 0.00 2.29
4233 6115 2.454336 TCTCTAGCTGATCCCGGAAA 57.546 50.000 0.73 0.00 0.00 3.13
4234 6116 2.242926 CATCTCTAGCTGATCCCGGAA 58.757 52.381 0.73 0.00 0.00 4.30
4235 6117 1.916506 CATCTCTAGCTGATCCCGGA 58.083 55.000 0.73 0.00 0.00 5.14
4236 6118 0.246086 GCATCTCTAGCTGATCCCGG 59.754 60.000 0.00 0.00 0.00 5.73
4237 6119 1.202114 GAGCATCTCTAGCTGATCCCG 59.798 57.143 0.00 0.00 43.58 5.14
4255 6137 2.681848 CAGCCAAGATGCTTGGTTAGAG 59.318 50.000 22.95 6.34 40.32 2.43
4266 6148 5.399858 CAAGAATTTCACTCAGCCAAGATG 58.600 41.667 0.00 0.00 0.00 2.90
4267 6149 4.461781 CCAAGAATTTCACTCAGCCAAGAT 59.538 41.667 0.00 0.00 0.00 2.40
4275 6157 5.065914 CCTGAGTTCCAAGAATTTCACTCA 58.934 41.667 13.02 13.02 38.61 3.41
4276 6158 5.308825 TCCTGAGTTCCAAGAATTTCACTC 58.691 41.667 0.00 3.45 32.81 3.51
4288 6170 4.338795 ACCTATCTTCTCCTGAGTTCCA 57.661 45.455 0.00 0.00 0.00 3.53
4295 6177 6.951198 ACATCCACTATACCTATCTTCTCCTG 59.049 42.308 0.00 0.00 0.00 3.86
4296 6178 7.109901 ACATCCACTATACCTATCTTCTCCT 57.890 40.000 0.00 0.00 0.00 3.69
4326 6208 1.614317 CCCCCTAAACCTGCTTGTCAG 60.614 57.143 0.00 0.00 42.49 3.51
4352 6234 9.601217 CAGAGCAAGGTTTATACTAGTAACATT 57.399 33.333 6.70 3.94 0.00 2.71
4353 6235 8.204836 CCAGAGCAAGGTTTATACTAGTAACAT 58.795 37.037 6.70 0.00 0.00 2.71
4355 6237 7.554211 ACCAGAGCAAGGTTTATACTAGTAAC 58.446 38.462 6.70 2.48 35.33 2.50
4356 6238 7.729124 ACCAGAGCAAGGTTTATACTAGTAA 57.271 36.000 6.70 0.00 35.33 2.24
4357 6239 7.729124 AACCAGAGCAAGGTTTATACTAGTA 57.271 36.000 4.77 4.77 46.85 1.82
4358 6240 6.622427 AACCAGAGCAAGGTTTATACTAGT 57.378 37.500 0.00 0.00 46.85 2.57
4361 6243 9.969001 TTTTATAACCAGAGCAAGGTTTATACT 57.031 29.630 11.88 0.00 46.85 2.12
4392 6274 4.489306 AGACCAGAGCAAGGTTTATACC 57.511 45.455 0.00 0.00 45.39 2.73
4405 6287 5.906113 ACTAGTACATCACAAGACCAGAG 57.094 43.478 0.00 0.00 0.00 3.35
4442 6332 6.751514 ACATGTCACAAACTAACTTGTTCA 57.248 33.333 0.00 0.00 37.43 3.18
4444 6334 7.598278 TGAAACATGTCACAAACTAACTTGTT 58.402 30.769 0.00 0.00 40.72 2.83
4455 6345 3.059257 CCGACGAATGAAACATGTCACAA 60.059 43.478 0.00 0.00 0.00 3.33
4472 6362 1.335964 ACACTCATGACTGTTCCGACG 60.336 52.381 2.48 0.00 0.00 5.12
4475 6365 2.154854 ACACACTCATGACTGTTCCG 57.845 50.000 5.37 0.00 0.00 4.30
4505 6395 3.799753 GGACCATGTACAGCGCAG 58.200 61.111 11.47 3.33 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.