Multiple sequence alignment - TraesCS2B01G617600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G617600 chr2B 100.000 4768 0 0 1 4768 794053159 794048392 0.000000e+00 8805.0
1 TraesCS2B01G617600 chr2B 82.721 544 73 18 87 621 239924922 239925453 9.350000e-127 464.0
2 TraesCS2B01G617600 chr2B 79.181 293 33 16 4467 4755 791477466 791477734 1.360000e-40 178.0
3 TraesCS2B01G617600 chr2A 92.631 1167 52 12 1761 2908 761246748 761247899 0.000000e+00 1648.0
4 TraesCS2B01G617600 chr2A 83.977 1398 112 45 5 1345 761245112 761246454 0.000000e+00 1238.0
5 TraesCS2B01G617600 chr2A 89.529 764 49 14 3335 4079 761248182 761248933 0.000000e+00 939.0
6 TraesCS2B01G617600 chr2A 86.572 633 60 18 4150 4768 761249198 761249819 0.000000e+00 675.0
7 TraesCS2B01G617600 chr2A 95.050 202 9 1 3119 3320 761247913 761248113 2.770000e-82 316.0
8 TraesCS2B01G617600 chr2A 82.778 180 16 5 4591 4768 769498568 769498402 3.850000e-31 147.0
9 TraesCS2B01G617600 chr2A 96.491 57 2 0 4092 4148 761248978 761249034 1.410000e-15 95.3
10 TraesCS2B01G617600 chr2D 88.533 1186 71 23 3402 4562 635950707 635949562 0.000000e+00 1376.0
11 TraesCS2B01G617600 chr2D 92.857 896 52 8 1958 2851 635952150 635951265 0.000000e+00 1290.0
12 TraesCS2B01G617600 chr2D 90.610 426 16 4 906 1331 635952951 635952550 1.170000e-150 544.0
13 TraesCS2B01G617600 chr2D 84.894 470 61 10 87 548 155067729 155067262 2.600000e-127 466.0
14 TraesCS2B01G617600 chr2D 88.028 284 21 8 1650 1924 635952520 635952241 1.660000e-84 324.0
15 TraesCS2B01G617600 chr2D 96.196 184 5 1 4587 4768 635949567 635949384 2.790000e-77 300.0
16 TraesCS2B01G617600 chr2D 92.908 141 10 0 3188 3328 635950957 635950817 6.250000e-49 206.0
17 TraesCS2B01G617600 chr2D 95.385 65 3 0 4704 4768 644362716 644362652 2.350000e-18 104.0
18 TraesCS2B01G617600 chr6D 87.283 519 44 14 4092 4601 156193092 156193597 1.490000e-159 573.0
19 TraesCS2B01G617600 chr1A 83.691 466 65 10 89 546 514777225 514776763 3.410000e-116 429.0
20 TraesCS2B01G617600 chr1A 83.476 466 66 10 89 546 515027113 515026651 1.590000e-114 424.0
21 TraesCS2B01G617600 chr1A 86.486 74 8 2 1105 1177 521289264 521289336 3.960000e-11 80.5
22 TraesCS2B01G617600 chr5A 80.769 546 87 12 87 622 369607511 369606974 1.230000e-110 411.0
23 TraesCS2B01G617600 chr7B 80.784 536 85 12 87 611 479129561 479129033 2.070000e-108 403.0
24 TraesCS2B01G617600 chr7B 81.953 471 76 9 87 549 505976897 505977366 1.610000e-104 390.0
25 TraesCS2B01G617600 chr7B 91.304 69 5 1 4553 4620 65396917 65396985 5.080000e-15 93.5
26 TraesCS2B01G617600 chr4B 80.474 548 87 14 87 621 79602278 79602818 7.430000e-108 401.0
27 TraesCS2B01G617600 chr3D 82.241 473 70 13 87 548 292003046 292002577 3.460000e-106 396.0
28 TraesCS2B01G617600 chr3D 96.875 64 2 0 4092 4155 535158753 535158816 1.810000e-19 108.0
29 TraesCS2B01G617600 chr3D 91.304 69 5 1 4553 4620 25846489 25846557 5.080000e-15 93.5
30 TraesCS2B01G617600 chr7D 82.418 364 38 15 4415 4768 583106498 583106845 1.300000e-75 294.0
31 TraesCS2B01G617600 chr5D 95.312 64 3 0 4092 4155 69455551 69455614 8.440000e-18 102.0
32 TraesCS2B01G617600 chr1D 95.312 64 3 0 4092 4155 24992182 24992119 8.440000e-18 102.0
33 TraesCS2B01G617600 chr1D 96.552 58 1 1 4564 4620 24992080 24992023 1.410000e-15 95.3
34 TraesCS2B01G617600 chr1D 77.305 141 28 4 1039 1177 426174902 426175040 3.960000e-11 80.5
35 TraesCS2B01G617600 chr1B 86.486 74 8 2 1105 1177 575861199 575861271 3.960000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G617600 chr2B 794048392 794053159 4767 True 8805.000000 8805 100.000000 1 4768 1 chr2B.!!$R1 4767
1 TraesCS2B01G617600 chr2B 239924922 239925453 531 False 464.000000 464 82.721000 87 621 1 chr2B.!!$F1 534
2 TraesCS2B01G617600 chr2A 761245112 761249819 4707 False 818.550000 1648 90.708333 5 4768 6 chr2A.!!$F1 4763
3 TraesCS2B01G617600 chr2D 635949384 635952951 3567 True 673.333333 1376 91.522000 906 4768 6 chr2D.!!$R3 3862
4 TraesCS2B01G617600 chr6D 156193092 156193597 505 False 573.000000 573 87.283000 4092 4601 1 chr6D.!!$F1 509
5 TraesCS2B01G617600 chr5A 369606974 369607511 537 True 411.000000 411 80.769000 87 622 1 chr5A.!!$R1 535
6 TraesCS2B01G617600 chr7B 479129033 479129561 528 True 403.000000 403 80.784000 87 611 1 chr7B.!!$R1 524
7 TraesCS2B01G617600 chr4B 79602278 79602818 540 False 401.000000 401 80.474000 87 621 1 chr4B.!!$F1 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
657 708 0.175760 TGAGGTTACTGGATGAGCGC 59.824 55.0 0.00 0.00 0.00 5.92 F
1422 1510 0.178998 ATCCATCCATGTGGCTGCTC 60.179 55.0 0.00 0.00 39.19 4.26 F
1475 1563 0.179468 TTAGGGCCGGCTTATCACAC 59.821 55.0 28.56 6.44 0.00 3.82 F
1644 1732 0.249114 TAATCGCATTAGCCGTCGCA 60.249 50.0 0.00 0.00 37.52 5.10 F
3179 3448 0.238289 CCCACGCAGTTGCTGTTTAG 59.762 55.0 2.29 0.00 41.61 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1484 1572 0.179062 GCATGAGGCAGGTGAGTAGG 60.179 60.0 0.00 0.0 43.97 3.18 R
3092 3359 0.035630 AAGCAGCCTGAAGCCTACAG 60.036 55.0 0.00 0.0 45.47 2.74 R
3093 3360 0.401738 AAAGCAGCCTGAAGCCTACA 59.598 50.0 0.00 0.0 45.47 2.74 R
3435 3765 1.043673 GGTCCCAGTCCTGCGTAGAT 61.044 60.0 0.53 0.0 0.00 1.98 R
4686 5247 1.729267 AACACCCCCTGATGCCACTT 61.729 55.0 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.140325 TCGGAGCAGAATGAAACCTTT 57.860 42.857 0.00 0.00 39.69 3.11
61 64 9.866655 AGAATCATGATAACTTAAGGCCAATTA 57.133 29.630 9.04 0.00 0.00 1.40
64 67 8.232913 TCATGATAACTTAAGGCCAATTAACC 57.767 34.615 5.01 0.00 0.00 2.85
96 99 4.901197 TGGACTTGCTGGTGTTATTCTA 57.099 40.909 0.00 0.00 0.00 2.10
114 117 9.959749 GTTATTCTAAACACCAATGACAGAAAA 57.040 29.630 0.00 0.00 30.19 2.29
126 129 7.029563 CCAATGACAGAAAAGTTTAGTATGGC 58.970 38.462 0.00 0.00 0.00 4.40
165 172 3.256704 TGGGGATTCAAGAGGTGTAGTT 58.743 45.455 0.00 0.00 0.00 2.24
172 179 9.110502 GGGATTCAAGAGGTGTAGTTATTAAAG 57.889 37.037 0.00 0.00 0.00 1.85
244 255 1.992557 ACAGATAGGGCCTTTGGTTGA 59.007 47.619 13.45 0.00 0.00 3.18
320 334 5.186256 TCCCCACTTTGATACATAGCAAA 57.814 39.130 2.62 2.62 39.02 3.68
326 340 7.315142 CCACTTTGATACATAGCAAACACATT 58.685 34.615 0.00 0.00 36.75 2.71
347 361 6.944290 ACATTTTGATGGATGACTTTCAGAGA 59.056 34.615 0.00 0.00 0.00 3.10
398 414 8.391075 ACACAAATATATGGGTGTAAGCATAC 57.609 34.615 16.78 0.00 42.24 2.39
468 486 5.506317 GCTTGATTTATGATCCGGTCAAAGG 60.506 44.000 0.00 0.00 40.97 3.11
515 535 8.935614 AACTTGTTTAAGACCCTAGCTTAAAT 57.064 30.769 13.50 0.78 44.71 1.40
523 543 1.678101 CCCTAGCTTAAATGGCACTGC 59.322 52.381 0.00 0.00 0.00 4.40
552 572 2.422479 TGGGTTCGATAACTCAGACTCG 59.578 50.000 0.00 0.00 41.26 4.18
553 573 2.223525 GGGTTCGATAACTCAGACTCGG 60.224 54.545 0.00 0.00 36.01 4.63
554 574 2.223525 GGTTCGATAACTCAGACTCGGG 60.224 54.545 0.00 0.00 35.81 5.14
555 575 1.676746 TCGATAACTCAGACTCGGGG 58.323 55.000 0.00 0.00 0.00 5.73
556 576 1.064906 TCGATAACTCAGACTCGGGGT 60.065 52.381 0.00 0.00 0.00 4.95
557 577 1.334243 CGATAACTCAGACTCGGGGTC 59.666 57.143 0.00 0.00 44.80 4.46
558 578 2.376109 GATAACTCAGACTCGGGGTCA 58.624 52.381 11.20 0.00 46.72 4.02
559 579 2.526888 TAACTCAGACTCGGGGTCAT 57.473 50.000 11.20 0.00 46.72 3.06
560 580 1.187087 AACTCAGACTCGGGGTCATC 58.813 55.000 11.20 0.00 46.72 2.92
561 581 0.333312 ACTCAGACTCGGGGTCATCT 59.667 55.000 11.20 0.00 46.72 2.90
562 582 1.028905 CTCAGACTCGGGGTCATCTC 58.971 60.000 11.20 0.00 46.72 2.75
563 583 0.626382 TCAGACTCGGGGTCATCTCT 59.374 55.000 11.20 0.00 46.72 3.10
564 584 1.844497 TCAGACTCGGGGTCATCTCTA 59.156 52.381 11.20 0.00 46.72 2.43
565 585 2.443632 TCAGACTCGGGGTCATCTCTAT 59.556 50.000 11.20 0.00 46.72 1.98
573 594 3.877508 CGGGGTCATCTCTATGGAAAAAC 59.122 47.826 0.00 0.00 33.61 2.43
579 600 5.292101 GTCATCTCTATGGAAAAACACGAGG 59.708 44.000 0.00 0.00 33.61 4.63
599 620 5.987953 CGAGGATCATTTCTGCTCTATTTCA 59.012 40.000 0.00 0.00 33.17 2.69
602 623 6.060788 GGATCATTTCTGCTCTATTTCAGGT 58.939 40.000 0.00 0.00 0.00 4.00
603 624 6.204495 GGATCATTTCTGCTCTATTTCAGGTC 59.796 42.308 0.00 0.00 0.00 3.85
604 625 6.053632 TCATTTCTGCTCTATTTCAGGTCA 57.946 37.500 0.00 0.00 0.00 4.02
605 626 6.111382 TCATTTCTGCTCTATTTCAGGTCAG 58.889 40.000 0.00 0.00 0.00 3.51
606 627 5.489792 TTTCTGCTCTATTTCAGGTCAGT 57.510 39.130 0.00 0.00 0.00 3.41
607 628 6.605471 TTTCTGCTCTATTTCAGGTCAGTA 57.395 37.500 0.00 0.00 0.00 2.74
608 629 6.605471 TTCTGCTCTATTTCAGGTCAGTAA 57.395 37.500 0.00 0.00 0.00 2.24
609 630 6.605471 TCTGCTCTATTTCAGGTCAGTAAA 57.395 37.500 0.00 0.00 0.00 2.01
610 631 6.634805 TCTGCTCTATTTCAGGTCAGTAAAG 58.365 40.000 0.00 0.00 0.00 1.85
611 632 6.437477 TCTGCTCTATTTCAGGTCAGTAAAGA 59.563 38.462 0.00 0.00 0.00 2.52
612 633 7.004555 TGCTCTATTTCAGGTCAGTAAAGAA 57.995 36.000 0.00 0.00 0.00 2.52
624 645 7.970614 CAGGTCAGTAAAGAAATTAATCAAGGC 59.029 37.037 0.00 0.00 0.00 4.35
628 649 6.688813 CAGTAAAGAAATTAATCAAGGCGCTC 59.311 38.462 7.64 0.00 0.00 5.03
631 652 6.942532 AAGAAATTAATCAAGGCGCTCATA 57.057 33.333 7.64 0.00 0.00 2.15
632 653 6.551385 AGAAATTAATCAAGGCGCTCATAG 57.449 37.500 7.64 0.00 0.00 2.23
633 654 5.471456 AGAAATTAATCAAGGCGCTCATAGG 59.529 40.000 7.64 0.00 0.00 2.57
634 655 4.623932 ATTAATCAAGGCGCTCATAGGA 57.376 40.909 7.64 0.00 0.00 2.94
635 656 4.415881 TTAATCAAGGCGCTCATAGGAA 57.584 40.909 7.64 0.00 0.00 3.36
637 658 4.623932 AATCAAGGCGCTCATAGGAATA 57.376 40.909 7.64 0.00 0.00 1.75
638 659 4.833478 ATCAAGGCGCTCATAGGAATAT 57.167 40.909 7.64 0.00 0.00 1.28
639 660 3.930336 TCAAGGCGCTCATAGGAATATG 58.070 45.455 7.64 0.00 0.00 1.78
640 661 3.578282 TCAAGGCGCTCATAGGAATATGA 59.422 43.478 7.64 0.00 35.40 2.15
650 701 7.782897 CTCATAGGAATATGAGGTTACTGGA 57.217 40.000 14.70 0.00 45.90 3.86
651 702 8.372877 CTCATAGGAATATGAGGTTACTGGAT 57.627 38.462 14.70 0.00 45.90 3.41
655 706 5.012561 AGGAATATGAGGTTACTGGATGAGC 59.987 44.000 0.00 0.00 0.00 4.26
657 708 0.175760 TGAGGTTACTGGATGAGCGC 59.824 55.000 0.00 0.00 0.00 5.92
662 713 1.083806 TTACTGGATGAGCGCTTGCG 61.084 55.000 13.26 10.90 45.69 4.85
669 720 2.061773 GATGAGCGCTTGCGTATGTAT 58.938 47.619 13.26 4.82 45.69 2.29
674 725 1.594518 GCGCTTGCGTATGTATTGTGG 60.595 52.381 16.38 0.00 0.00 4.17
675 726 1.594518 CGCTTGCGTATGTATTGTGGC 60.595 52.381 6.86 0.00 0.00 5.01
676 727 1.400142 GCTTGCGTATGTATTGTGGCA 59.600 47.619 0.00 0.00 0.00 4.92
721 773 6.979817 TCTTCCACAGATGAAAAACACAAATG 59.020 34.615 0.00 0.00 0.00 2.32
730 782 8.902806 AGATGAAAAACACAAATGTCAGTAAGA 58.097 29.630 0.00 0.00 38.45 2.10
753 810 5.453567 AAATTAGTGACAGGGCTGAAAAC 57.546 39.130 0.00 0.00 0.00 2.43
800 863 4.083590 GGAATGAATAATTCTGCTCCGAGC 60.084 45.833 13.81 13.81 43.71 5.03
835 906 5.596836 AAGAGAAATTGCTCAACAACCAA 57.403 34.783 16.08 0.00 42.27 3.67
836 907 4.936891 AGAGAAATTGCTCAACAACCAAC 58.063 39.130 16.08 0.00 42.27 3.77
837 908 3.705604 AGAAATTGCTCAACAACCAACG 58.294 40.909 0.00 0.00 42.27 4.10
975 1052 0.481128 CCTCCCTACTCCTCCTCCTC 59.519 65.000 0.00 0.00 0.00 3.71
976 1053 0.481128 CTCCCTACTCCTCCTCCTCC 59.519 65.000 0.00 0.00 0.00 4.30
1093 1176 0.540365 CAACATCAAGGGGCTGGTGT 60.540 55.000 0.00 0.00 42.55 4.16
1282 1365 1.425831 TCTTTTTCCCCCGATTCACCA 59.574 47.619 0.00 0.00 0.00 4.17
1292 1380 0.673644 CGATTCACCACAGACCACCC 60.674 60.000 0.00 0.00 0.00 4.61
1293 1381 0.693049 GATTCACCACAGACCACCCT 59.307 55.000 0.00 0.00 0.00 4.34
1294 1382 1.906574 GATTCACCACAGACCACCCTA 59.093 52.381 0.00 0.00 0.00 3.53
1295 1383 2.038863 TTCACCACAGACCACCCTAT 57.961 50.000 0.00 0.00 0.00 2.57
1296 1384 1.568504 TCACCACAGACCACCCTATC 58.431 55.000 0.00 0.00 0.00 2.08
1311 1399 2.830923 CCCTATCCTATCCTCTGCACAG 59.169 54.545 0.00 0.00 0.00 3.66
1337 1425 4.155709 TGCAATCCCCATTTCAGTGTTAA 58.844 39.130 0.00 0.00 0.00 2.01
1340 1428 5.337491 GCAATCCCCATTTCAGTGTTAACAT 60.337 40.000 12.26 0.00 0.00 2.71
1341 1429 6.127479 GCAATCCCCATTTCAGTGTTAACATA 60.127 38.462 12.26 0.00 0.00 2.29
1342 1430 7.257722 CAATCCCCATTTCAGTGTTAACATAC 58.742 38.462 12.26 0.00 0.00 2.39
1343 1431 6.134535 TCCCCATTTCAGTGTTAACATACT 57.865 37.500 12.26 1.98 0.00 2.12
1344 1432 6.177610 TCCCCATTTCAGTGTTAACATACTC 58.822 40.000 12.26 0.00 0.00 2.59
1345 1433 6.012858 TCCCCATTTCAGTGTTAACATACTCT 60.013 38.462 12.26 0.80 0.00 3.24
1346 1434 6.094048 CCCCATTTCAGTGTTAACATACTCTG 59.906 42.308 12.26 13.72 39.68 3.35
1347 1435 6.094048 CCCATTTCAGTGTTAACATACTCTGG 59.906 42.308 18.58 16.33 39.13 3.86
1348 1436 6.655003 CCATTTCAGTGTTAACATACTCTGGT 59.345 38.462 18.58 7.43 39.13 4.00
1349 1437 7.822334 CCATTTCAGTGTTAACATACTCTGGTA 59.178 37.037 18.58 10.62 39.13 3.25
1350 1438 8.656849 CATTTCAGTGTTAACATACTCTGGTAC 58.343 37.037 18.58 1.87 39.13 3.34
1351 1439 6.904463 TCAGTGTTAACATACTCTGGTACA 57.096 37.500 18.58 2.86 39.13 2.90
1371 1459 8.916062 TGGTACAGTAGTTTATTATTCGGATGA 58.084 33.333 0.00 0.00 0.00 2.92
1372 1460 9.408069 GGTACAGTAGTTTATTATTCGGATGAG 57.592 37.037 0.00 0.00 0.00 2.90
1375 1463 8.915036 ACAGTAGTTTATTATTCGGATGAGAGT 58.085 33.333 0.00 0.00 0.00 3.24
1385 1473 9.915629 ATTATTCGGATGAGAGTAGAAACATAC 57.084 33.333 0.00 0.00 0.00 2.39
1386 1474 6.769134 TTCGGATGAGAGTAGAAACATACA 57.231 37.500 0.00 0.00 0.00 2.29
1387 1475 6.378710 TCGGATGAGAGTAGAAACATACAG 57.621 41.667 0.00 0.00 0.00 2.74
1388 1476 5.886474 TCGGATGAGAGTAGAAACATACAGT 59.114 40.000 0.00 0.00 0.00 3.55
1389 1477 7.052248 TCGGATGAGAGTAGAAACATACAGTA 58.948 38.462 0.00 0.00 0.00 2.74
1390 1478 7.555195 TCGGATGAGAGTAGAAACATACAGTAA 59.445 37.037 0.00 0.00 0.00 2.24
1391 1479 7.858382 CGGATGAGAGTAGAAACATACAGTAAG 59.142 40.741 0.00 0.00 0.00 2.34
1392 1480 8.688151 GGATGAGAGTAGAAACATACAGTAAGT 58.312 37.037 0.00 0.00 0.00 2.24
1395 1483 9.955102 TGAGAGTAGAAACATACAGTAAGTAGA 57.045 33.333 0.00 0.00 35.85 2.59
1410 1498 8.598041 ACAGTAAGTAGATTCCAATATCCATCC 58.402 37.037 0.00 0.00 0.00 3.51
1411 1499 8.597167 CAGTAAGTAGATTCCAATATCCATCCA 58.403 37.037 0.00 0.00 0.00 3.41
1412 1500 9.343994 AGTAAGTAGATTCCAATATCCATCCAT 57.656 33.333 0.00 0.00 0.00 3.41
1413 1501 9.388506 GTAAGTAGATTCCAATATCCATCCATG 57.611 37.037 0.00 0.00 0.00 3.66
1414 1502 7.579940 AGTAGATTCCAATATCCATCCATGT 57.420 36.000 0.00 0.00 0.00 3.21
1415 1503 7.400439 AGTAGATTCCAATATCCATCCATGTG 58.600 38.462 0.00 0.00 0.00 3.21
1416 1504 5.577100 AGATTCCAATATCCATCCATGTGG 58.423 41.667 0.00 0.00 40.76 4.17
1417 1505 3.159213 TCCAATATCCATCCATGTGGC 57.841 47.619 0.00 0.00 39.19 5.01
1418 1506 2.718062 TCCAATATCCATCCATGTGGCT 59.282 45.455 0.00 0.00 39.19 4.75
1419 1507 2.823747 CCAATATCCATCCATGTGGCTG 59.176 50.000 0.00 0.00 39.19 4.85
1420 1508 2.211250 ATATCCATCCATGTGGCTGC 57.789 50.000 0.00 0.00 39.19 5.25
1421 1509 1.142936 TATCCATCCATGTGGCTGCT 58.857 50.000 0.00 0.00 39.19 4.24
1422 1510 0.178998 ATCCATCCATGTGGCTGCTC 60.179 55.000 0.00 0.00 39.19 4.26
1423 1511 1.077285 CCATCCATGTGGCTGCTCA 60.077 57.895 0.00 0.00 34.44 4.26
1424 1512 1.101635 CCATCCATGTGGCTGCTCAG 61.102 60.000 0.00 0.00 34.44 3.35
1450 1538 1.006922 GCTGGAGCTTTGTTGTGGC 60.007 57.895 0.00 0.00 38.21 5.01
1451 1539 1.737355 GCTGGAGCTTTGTTGTGGCA 61.737 55.000 0.00 0.00 38.21 4.92
1452 1540 0.313043 CTGGAGCTTTGTTGTGGCAG 59.687 55.000 0.00 0.00 0.00 4.85
1453 1541 1.006922 GGAGCTTTGTTGTGGCAGC 60.007 57.895 0.00 0.00 0.00 5.25
1454 1542 1.370900 GAGCTTTGTTGTGGCAGCG 60.371 57.895 0.00 0.00 37.35 5.18
1455 1543 1.785041 GAGCTTTGTTGTGGCAGCGA 61.785 55.000 0.00 0.00 37.35 4.93
1456 1544 1.174712 AGCTTTGTTGTGGCAGCGAT 61.175 50.000 0.00 0.00 37.35 4.58
1457 1545 0.318955 GCTTTGTTGTGGCAGCGATT 60.319 50.000 0.00 0.00 0.00 3.34
1458 1546 1.068610 GCTTTGTTGTGGCAGCGATTA 60.069 47.619 0.00 0.00 0.00 1.75
1459 1547 2.855180 CTTTGTTGTGGCAGCGATTAG 58.145 47.619 0.00 0.00 0.00 1.73
1460 1548 1.164411 TTGTTGTGGCAGCGATTAGG 58.836 50.000 0.00 0.00 0.00 2.69
1461 1549 0.676466 TGTTGTGGCAGCGATTAGGG 60.676 55.000 0.00 0.00 0.00 3.53
1462 1550 1.748879 TTGTGGCAGCGATTAGGGC 60.749 57.895 0.00 0.00 0.00 5.19
1463 1551 2.902343 GTGGCAGCGATTAGGGCC 60.902 66.667 0.00 0.00 46.58 5.80
1467 1555 4.241555 CAGCGATTAGGGCCGGCT 62.242 66.667 28.56 10.45 0.00 5.52
1468 1556 3.480133 AGCGATTAGGGCCGGCTT 61.480 61.111 28.56 17.66 0.00 4.35
1469 1557 2.138179 AGCGATTAGGGCCGGCTTA 61.138 57.895 28.56 16.53 0.00 3.09
1470 1558 1.003718 GCGATTAGGGCCGGCTTAT 60.004 57.895 28.56 15.00 0.00 1.73
1471 1559 1.019805 GCGATTAGGGCCGGCTTATC 61.020 60.000 28.56 20.47 0.00 1.75
1472 1560 0.320374 CGATTAGGGCCGGCTTATCA 59.680 55.000 28.56 7.40 0.00 2.15
1473 1561 1.809684 GATTAGGGCCGGCTTATCAC 58.190 55.000 28.56 8.16 0.00 3.06
1474 1562 1.071699 GATTAGGGCCGGCTTATCACA 59.928 52.381 28.56 4.43 0.00 3.58
1475 1563 0.179468 TTAGGGCCGGCTTATCACAC 59.821 55.000 28.56 6.44 0.00 3.82
1476 1564 0.978667 TAGGGCCGGCTTATCACACA 60.979 55.000 28.56 0.00 0.00 3.72
1477 1565 1.152963 GGGCCGGCTTATCACACAT 60.153 57.895 28.56 0.00 0.00 3.21
1478 1566 0.751643 GGGCCGGCTTATCACACATT 60.752 55.000 28.56 0.00 0.00 2.71
1479 1567 1.102978 GGCCGGCTTATCACACATTT 58.897 50.000 28.56 0.00 0.00 2.32
1480 1568 1.202290 GGCCGGCTTATCACACATTTG 60.202 52.381 28.56 0.00 0.00 2.32
1481 1569 1.798813 GCCGGCTTATCACACATTTGC 60.799 52.381 22.15 0.00 0.00 3.68
1482 1570 1.202290 CCGGCTTATCACACATTTGCC 60.202 52.381 0.00 0.00 35.94 4.52
1483 1571 1.745087 CGGCTTATCACACATTTGCCT 59.255 47.619 0.00 0.00 37.01 4.75
1484 1572 2.223340 CGGCTTATCACACATTTGCCTC 60.223 50.000 0.00 0.00 37.01 4.70
1485 1573 2.099756 GGCTTATCACACATTTGCCTCC 59.900 50.000 0.00 0.00 36.32 4.30
1499 1587 1.681486 GCCTCCTACTCACCTGCCTC 61.681 65.000 0.00 0.00 0.00 4.70
1516 1604 2.289072 GCCTCATGCCTATCTCGCTTTA 60.289 50.000 0.00 0.00 0.00 1.85
1517 1605 3.618507 GCCTCATGCCTATCTCGCTTTAT 60.619 47.826 0.00 0.00 0.00 1.40
1518 1606 4.382040 GCCTCATGCCTATCTCGCTTTATA 60.382 45.833 0.00 0.00 0.00 0.98
1520 1608 6.344500 CCTCATGCCTATCTCGCTTTATATT 58.656 40.000 0.00 0.00 0.00 1.28
1521 1609 6.478344 CCTCATGCCTATCTCGCTTTATATTC 59.522 42.308 0.00 0.00 0.00 1.75
1522 1610 6.935167 TCATGCCTATCTCGCTTTATATTCA 58.065 36.000 0.00 0.00 0.00 2.57
1523 1611 7.038048 TCATGCCTATCTCGCTTTATATTCAG 58.962 38.462 0.00 0.00 0.00 3.02
1524 1612 6.590234 TGCCTATCTCGCTTTATATTCAGA 57.410 37.500 0.00 0.00 0.00 3.27
1525 1613 6.993079 TGCCTATCTCGCTTTATATTCAGAA 58.007 36.000 0.00 0.00 0.00 3.02
1526 1614 6.868864 TGCCTATCTCGCTTTATATTCAGAAC 59.131 38.462 0.00 0.00 0.00 3.01
1545 1633 6.426937 TCAGAACAAATGGAGTTACTTACTGC 59.573 38.462 0.00 0.00 44.78 4.40
1595 1683 2.223876 TGTCGACCGCAGTTTAGACTTT 60.224 45.455 14.12 0.00 32.54 2.66
1603 1691 7.009815 CGACCGCAGTTTAGACTTTTATTATGA 59.990 37.037 0.00 0.00 32.54 2.15
1604 1692 7.971455 ACCGCAGTTTAGACTTTTATTATGAC 58.029 34.615 0.00 0.00 32.54 3.06
1605 1693 7.604927 ACCGCAGTTTAGACTTTTATTATGACA 59.395 33.333 0.00 0.00 32.54 3.58
1606 1694 8.612619 CCGCAGTTTAGACTTTTATTATGACAT 58.387 33.333 0.00 0.00 32.54 3.06
1607 1695 9.988350 CGCAGTTTAGACTTTTATTATGACATT 57.012 29.630 0.00 0.00 32.54 2.71
1637 1725 5.008613 TCCTTCCAATGTTAATCGCATTAGC 59.991 40.000 0.00 0.00 35.09 3.09
1644 1732 0.249114 TAATCGCATTAGCCGTCGCA 60.249 50.000 0.00 0.00 37.52 5.10
1694 1782 5.415701 GCTCAGAATTGGGTTTGTGATCTTA 59.584 40.000 0.00 0.00 29.65 2.10
1699 1787 3.788227 TGGGTTTGTGATCTTACTGCT 57.212 42.857 0.00 0.00 0.00 4.24
1703 1791 3.253188 GGTTTGTGATCTTACTGCTGCAA 59.747 43.478 3.02 0.00 0.00 4.08
1705 1793 5.280945 GTTTGTGATCTTACTGCTGCAAAA 58.719 37.500 3.02 0.17 0.00 2.44
1707 1795 5.050644 TGTGATCTTACTGCTGCAAAATG 57.949 39.130 3.02 0.00 0.00 2.32
1709 1797 3.119388 TGATCTTACTGCTGCAAAATGGC 60.119 43.478 3.02 0.00 0.00 4.40
1735 1823 3.184683 CTCGCTGCTCGGTGAAGC 61.185 66.667 0.00 0.00 42.82 3.86
1788 1923 7.880195 ACTGTCATATCTTAAGTCTTGTGCTTT 59.120 33.333 1.63 0.00 0.00 3.51
1977 2182 8.475639 TCAACTTATCCTGTACCTTCTACATTC 58.524 37.037 0.00 0.00 0.00 2.67
2013 2218 0.324738 TGGTTGTTGGGGAAGTTGCA 60.325 50.000 0.00 0.00 0.00 4.08
2130 2336 4.006319 CCTTCCTTCCTGTGTTTCATCTC 58.994 47.826 0.00 0.00 0.00 2.75
2170 2390 6.609237 TTCATCATTAATCTGTACTGCAGC 57.391 37.500 15.27 0.00 44.66 5.25
2242 2462 0.821517 TCGGATGCGTCCTATGTGTT 59.178 50.000 22.53 0.00 42.73 3.32
2302 2522 2.131972 CGTCAAATTGAGTCGGTGACA 58.868 47.619 0.00 0.00 38.80 3.58
2371 2592 3.323403 TGCCAATTTCGGAATGTTCCTTT 59.677 39.130 9.90 0.00 45.33 3.11
2374 2595 5.163513 CCAATTTCGGAATGTTCCTTTCAG 58.836 41.667 9.90 0.00 45.33 3.02
2375 2596 5.278957 CCAATTTCGGAATGTTCCTTTCAGT 60.279 40.000 9.90 0.00 45.33 3.41
2376 2597 4.829064 TTTCGGAATGTTCCTTTCAGTG 57.171 40.909 9.90 0.00 45.33 3.66
2377 2598 2.151202 TCGGAATGTTCCTTTCAGTGC 58.849 47.619 9.90 0.00 45.33 4.40
2378 2599 1.200020 CGGAATGTTCCTTTCAGTGCC 59.800 52.381 9.90 0.00 45.33 5.01
2379 2600 2.238521 GGAATGTTCCTTTCAGTGCCA 58.761 47.619 4.53 0.00 44.11 4.92
2380 2601 2.029918 GGAATGTTCCTTTCAGTGCCAC 60.030 50.000 4.53 0.00 44.11 5.01
2381 2602 2.664402 ATGTTCCTTTCAGTGCCACT 57.336 45.000 0.00 0.00 0.00 4.00
2382 2603 2.435372 TGTTCCTTTCAGTGCCACTT 57.565 45.000 0.00 0.00 0.00 3.16
2383 2604 3.569194 TGTTCCTTTCAGTGCCACTTA 57.431 42.857 0.00 0.00 0.00 2.24
2384 2605 3.211045 TGTTCCTTTCAGTGCCACTTAC 58.789 45.455 0.00 0.00 0.00 2.34
2385 2606 2.552743 GTTCCTTTCAGTGCCACTTACC 59.447 50.000 0.00 0.00 0.00 2.85
2648 2874 4.687018 TCAGTATATTGTGTGAACGCGTTT 59.313 37.500 27.32 10.75 0.00 3.60
2843 3069 1.283029 CTGAACCACCCATCCATGACT 59.717 52.381 0.00 0.00 0.00 3.41
2883 3109 2.030717 CGAGGGTGATCGGAGTTCTATG 60.031 54.545 0.00 0.00 39.04 2.23
2926 3190 7.037438 CCAAGGAGAAATGACATAATGGTTTG 58.963 38.462 0.00 0.00 0.00 2.93
2929 3193 8.281212 AGGAGAAATGACATAATGGTTTGTAC 57.719 34.615 0.00 0.00 0.00 2.90
2936 3200 9.691362 AATGACATAATGGTTTGTACTGTTTTC 57.309 29.630 0.00 0.00 0.00 2.29
2937 3201 8.226819 TGACATAATGGTTTGTACTGTTTTCA 57.773 30.769 0.00 0.00 0.00 2.69
2938 3202 8.132362 TGACATAATGGTTTGTACTGTTTTCAC 58.868 33.333 0.00 0.00 0.00 3.18
2943 3207 3.025262 GTTTGTACTGTTTTCACCCCCA 58.975 45.455 0.00 0.00 0.00 4.96
2945 3209 3.603965 TGTACTGTTTTCACCCCCATT 57.396 42.857 0.00 0.00 0.00 3.16
2947 3211 5.063017 TGTACTGTTTTCACCCCCATTTA 57.937 39.130 0.00 0.00 0.00 1.40
2948 3212 5.455872 TGTACTGTTTTCACCCCCATTTAA 58.544 37.500 0.00 0.00 0.00 1.52
2949 3213 6.078664 TGTACTGTTTTCACCCCCATTTAAT 58.921 36.000 0.00 0.00 0.00 1.40
2950 3214 5.738619 ACTGTTTTCACCCCCATTTAATC 57.261 39.130 0.00 0.00 0.00 1.75
2951 3215 4.530553 ACTGTTTTCACCCCCATTTAATCC 59.469 41.667 0.00 0.00 0.00 3.01
2953 3217 5.097234 TGTTTTCACCCCCATTTAATCCAT 58.903 37.500 0.00 0.00 0.00 3.41
2954 3218 5.188751 TGTTTTCACCCCCATTTAATCCATC 59.811 40.000 0.00 0.00 0.00 3.51
2955 3219 4.616671 TTCACCCCCATTTAATCCATCA 57.383 40.909 0.00 0.00 0.00 3.07
2956 3220 4.183223 TCACCCCCATTTAATCCATCAG 57.817 45.455 0.00 0.00 0.00 2.90
2957 3221 3.531397 TCACCCCCATTTAATCCATCAGT 59.469 43.478 0.00 0.00 0.00 3.41
2958 3222 4.729370 TCACCCCCATTTAATCCATCAGTA 59.271 41.667 0.00 0.00 0.00 2.74
2959 3223 5.375354 TCACCCCCATTTAATCCATCAGTAT 59.625 40.000 0.00 0.00 0.00 2.12
2989 3256 8.650143 AGAGCCTTAAATGTTTAGAATTTCCA 57.350 30.769 0.00 0.00 0.00 3.53
2990 3257 8.743714 AGAGCCTTAAATGTTTAGAATTTCCAG 58.256 33.333 0.00 0.00 0.00 3.86
2991 3258 8.422577 AGCCTTAAATGTTTAGAATTTCCAGT 57.577 30.769 0.00 0.00 0.00 4.00
2992 3259 9.528489 AGCCTTAAATGTTTAGAATTTCCAGTA 57.472 29.630 0.00 0.00 0.00 2.74
2993 3260 9.788960 GCCTTAAATGTTTAGAATTTCCAGTAG 57.211 33.333 0.00 0.00 0.00 2.57
3002 3269 9.841880 GTTTAGAATTTCCAGTAGATTTTGGTC 57.158 33.333 0.00 0.00 35.89 4.02
3004 3271 7.929941 AGAATTTCCAGTAGATTTTGGTCTC 57.070 36.000 0.00 0.00 35.89 3.36
3005 3272 6.887002 AGAATTTCCAGTAGATTTTGGTCTCC 59.113 38.462 0.00 0.00 35.89 3.71
3007 3274 4.826274 TCCAGTAGATTTTGGTCTCCTG 57.174 45.455 0.00 0.00 33.42 3.86
3008 3275 3.878778 CCAGTAGATTTTGGTCTCCTGG 58.121 50.000 1.85 1.85 43.21 4.45
3009 3276 3.264450 CCAGTAGATTTTGGTCTCCTGGT 59.736 47.826 7.21 0.00 43.56 4.00
3010 3277 4.469945 CCAGTAGATTTTGGTCTCCTGGTA 59.530 45.833 7.21 0.00 43.56 3.25
3011 3278 5.045869 CCAGTAGATTTTGGTCTCCTGGTAA 60.046 44.000 7.21 0.00 43.56 2.85
3012 3279 6.472887 CAGTAGATTTTGGTCTCCTGGTAAA 58.527 40.000 0.00 0.00 30.91 2.01
3013 3280 6.940298 CAGTAGATTTTGGTCTCCTGGTAAAA 59.060 38.462 0.00 0.00 30.91 1.52
3014 3281 6.940867 AGTAGATTTTGGTCTCCTGGTAAAAC 59.059 38.462 0.00 0.00 0.00 2.43
3015 3282 5.953571 AGATTTTGGTCTCCTGGTAAAACT 58.046 37.500 0.00 0.00 0.00 2.66
3016 3283 6.004574 AGATTTTGGTCTCCTGGTAAAACTC 58.995 40.000 0.00 0.00 0.00 3.01
3017 3284 4.781775 TTTGGTCTCCTGGTAAAACTCA 57.218 40.909 0.00 0.00 0.00 3.41
3018 3285 4.993705 TTGGTCTCCTGGTAAAACTCAT 57.006 40.909 0.00 0.00 0.00 2.90
3019 3286 4.286297 TGGTCTCCTGGTAAAACTCATG 57.714 45.455 0.00 0.00 0.00 3.07
3020 3287 3.650942 TGGTCTCCTGGTAAAACTCATGT 59.349 43.478 0.00 0.00 0.00 3.21
3021 3288 4.003648 GGTCTCCTGGTAAAACTCATGTG 58.996 47.826 0.00 0.00 0.00 3.21
3022 3289 4.505039 GGTCTCCTGGTAAAACTCATGTGT 60.505 45.833 0.00 0.00 0.00 3.72
3023 3290 4.452455 GTCTCCTGGTAAAACTCATGTGTG 59.548 45.833 0.31 0.00 0.00 3.82
3024 3291 3.146066 TCCTGGTAAAACTCATGTGTGC 58.854 45.455 0.31 0.00 0.00 4.57
3025 3292 3.149196 CCTGGTAAAACTCATGTGTGCT 58.851 45.455 0.31 0.00 0.00 4.40
3026 3293 4.041075 TCCTGGTAAAACTCATGTGTGCTA 59.959 41.667 0.31 0.00 0.00 3.49
3027 3294 4.154195 CCTGGTAAAACTCATGTGTGCTAC 59.846 45.833 0.31 6.22 0.00 3.58
3030 3297 6.526526 TGGTAAAACTCATGTGTGCTACTAA 58.473 36.000 0.31 0.00 0.00 2.24
3033 3300 6.560253 AAAACTCATGTGTGCTACTAAAGG 57.440 37.500 0.31 0.00 0.00 3.11
3034 3301 3.600388 ACTCATGTGTGCTACTAAAGGC 58.400 45.455 0.00 0.00 0.00 4.35
3038 3305 2.083774 TGTGTGCTACTAAAGGCATGC 58.916 47.619 9.90 9.90 40.66 4.06
3041 3308 3.191371 GTGTGCTACTAAAGGCATGCTTT 59.809 43.478 18.92 14.31 40.66 3.51
3059 3326 5.280945 TGCTTTGCTGAAATACAAGTTCAC 58.719 37.500 0.00 0.00 31.78 3.18
3063 3330 7.113544 GCTTTGCTGAAATACAAGTTCACTAAC 59.886 37.037 0.00 0.00 35.72 2.34
3067 3334 6.366877 GCTGAAATACAAGTTCACTAACGGTA 59.633 38.462 0.00 0.00 40.73 4.02
3068 3335 7.620806 GCTGAAATACAAGTTCACTAACGGTAC 60.621 40.741 0.00 0.00 40.73 3.34
3069 3336 7.208777 TGAAATACAAGTTCACTAACGGTACA 58.791 34.615 0.00 0.00 40.73 2.90
3070 3337 7.874016 TGAAATACAAGTTCACTAACGGTACAT 59.126 33.333 0.00 0.00 40.73 2.29
3071 3338 8.611654 AAATACAAGTTCACTAACGGTACATT 57.388 30.769 0.00 0.00 40.73 2.71
3072 3339 5.917541 ACAAGTTCACTAACGGTACATTG 57.082 39.130 0.00 0.00 40.73 2.82
3073 3340 5.362263 ACAAGTTCACTAACGGTACATTGT 58.638 37.500 0.00 0.00 40.73 2.71
3074 3341 5.235616 ACAAGTTCACTAACGGTACATTGTG 59.764 40.000 0.00 0.00 40.73 3.33
3075 3342 3.744426 AGTTCACTAACGGTACATTGTGC 59.256 43.478 0.00 0.00 40.73 4.57
3076 3343 3.388345 TCACTAACGGTACATTGTGCA 57.612 42.857 7.21 0.00 0.00 4.57
3077 3344 3.729966 TCACTAACGGTACATTGTGCAA 58.270 40.909 7.21 0.00 0.00 4.08
3078 3345 3.743911 TCACTAACGGTACATTGTGCAAG 59.256 43.478 7.21 3.11 0.00 4.01
3079 3346 3.071479 ACTAACGGTACATTGTGCAAGG 58.929 45.455 7.21 0.00 0.00 3.61
3080 3347 0.596082 AACGGTACATTGTGCAAGGC 59.404 50.000 7.21 0.00 0.00 4.35
3081 3348 0.536233 ACGGTACATTGTGCAAGGCA 60.536 50.000 7.21 0.00 35.60 4.75
3082 3349 0.595588 CGGTACATTGTGCAAGGCAA 59.404 50.000 7.21 0.00 41.47 4.52
3083 3350 1.000827 CGGTACATTGTGCAAGGCAAA 60.001 47.619 7.21 0.00 41.47 3.68
3084 3351 2.544694 CGGTACATTGTGCAAGGCAAAA 60.545 45.455 7.21 0.00 41.47 2.44
3085 3352 3.059166 GGTACATTGTGCAAGGCAAAAG 58.941 45.455 7.21 0.00 39.26 2.27
3086 3353 3.243704 GGTACATTGTGCAAGGCAAAAGA 60.244 43.478 7.21 0.00 39.26 2.52
3087 3354 3.540314 ACATTGTGCAAGGCAAAAGAA 57.460 38.095 0.00 0.00 39.26 2.52
3088 3355 4.075963 ACATTGTGCAAGGCAAAAGAAT 57.924 36.364 0.00 0.00 39.26 2.40
3089 3356 3.810941 ACATTGTGCAAGGCAAAAGAATG 59.189 39.130 0.00 6.12 39.26 2.67
3090 3357 1.868469 TGTGCAAGGCAAAAGAATGC 58.132 45.000 0.00 0.00 41.47 3.56
3098 3365 2.947448 GCAAAAGAATGCCCTGTAGG 57.053 50.000 0.00 0.00 40.49 3.18
3146 3414 4.156556 GCTCAGCAAACTGTATGAAATGGA 59.843 41.667 0.00 0.00 44.77 3.41
3179 3448 0.238289 CCCACGCAGTTGCTGTTTAG 59.762 55.000 2.29 0.00 41.61 1.85
3298 3567 4.016444 TCACATCTTTAACCATCTTGGCC 58.984 43.478 0.00 0.00 42.67 5.36
3330 3603 9.817365 GATTATGTTCAAGGTATGATGATTTCG 57.183 33.333 0.00 0.00 38.03 3.46
3333 3606 7.072177 TGTTCAAGGTATGATGATTTCGTTC 57.928 36.000 0.00 0.00 38.03 3.95
3334 3607 6.878923 TGTTCAAGGTATGATGATTTCGTTCT 59.121 34.615 0.00 0.00 38.03 3.01
3339 3669 9.698309 CAAGGTATGATGATTTCGTTCTAGTAT 57.302 33.333 0.00 0.00 0.00 2.12
3347 3677 9.302345 GATGATTTCGTTCTAGTATCTGTCAAA 57.698 33.333 0.00 0.00 0.00 2.69
3373 3703 3.940209 CTAGCCATTCTCTCCAGCTAG 57.060 52.381 3.22 3.22 44.91 3.42
3383 3713 3.118482 TCTCTCCAGCTAGAAATGCTTGG 60.118 47.826 0.00 0.00 38.92 3.61
3427 3757 4.168014 TGCTTCGCATGTCATTTCATTTC 58.832 39.130 0.00 0.00 31.71 2.17
3428 3758 4.168014 GCTTCGCATGTCATTTCATTTCA 58.832 39.130 0.00 0.00 0.00 2.69
3432 3762 7.622672 GCTTCGCATGTCATTTCATTTCATTTT 60.623 33.333 0.00 0.00 0.00 1.82
3433 3763 8.754230 TTCGCATGTCATTTCATTTCATTTTA 57.246 26.923 0.00 0.00 0.00 1.52
3434 3764 8.929827 TCGCATGTCATTTCATTTCATTTTAT 57.070 26.923 0.00 0.00 0.00 1.40
3477 3807 3.305110 GCAAAATCCGACACAAATCGTT 58.695 40.909 0.00 0.00 40.59 3.85
3557 3887 2.968574 AGGACATGGCTGATGGTACTAG 59.031 50.000 0.00 0.00 36.23 2.57
3563 3893 3.450904 TGGCTGATGGTACTAGGAGTTT 58.549 45.455 0.00 0.00 0.00 2.66
3597 3927 6.391227 TGACATTTTTCTTGTTCCTTCCTC 57.609 37.500 0.00 0.00 0.00 3.71
3685 4015 3.761897 TCCGTCTTCCAACCATTTCATT 58.238 40.909 0.00 0.00 0.00 2.57
3740 4070 2.472029 GAAGGGGTTCCTCTCAGATCA 58.528 52.381 0.00 0.00 44.07 2.92
3874 4204 1.060698 GTTGTATCTCGGCTGTTTCGC 59.939 52.381 0.00 0.00 0.00 4.70
3887 4217 1.202758 TGTTTCGCATGTTCTGGGAGT 60.203 47.619 0.00 0.00 46.27 3.85
3894 4224 3.347216 GCATGTTCTGGGAGTATTGTGT 58.653 45.455 0.00 0.00 0.00 3.72
3946 4280 0.396556 TAGCATAGCACCGGAGTGGA 60.397 55.000 9.46 0.00 44.69 4.02
3952 4286 1.966451 GCACCGGAGTGGAAGTTGG 60.966 63.158 9.46 0.00 44.69 3.77
3976 4314 7.239563 TGGTCTGTATAATGGATGGGTTATCAT 59.760 37.037 0.00 0.00 37.54 2.45
4241 4791 7.330946 CACTGTAGAAAACTGATATCGGAACAA 59.669 37.037 18.63 0.00 0.00 2.83
4294 4844 8.311650 ACATCAACTACATACACAAGAGAAAC 57.688 34.615 0.00 0.00 0.00 2.78
4296 4846 7.946655 TCAACTACATACACAAGAGAAACAG 57.053 36.000 0.00 0.00 0.00 3.16
4297 4847 7.497595 TCAACTACATACACAAGAGAAACAGT 58.502 34.615 0.00 0.00 0.00 3.55
4298 4848 7.985184 TCAACTACATACACAAGAGAAACAGTT 59.015 33.333 0.00 0.00 0.00 3.16
4299 4849 9.256477 CAACTACATACACAAGAGAAACAGTTA 57.744 33.333 0.00 0.00 0.00 2.24
4300 4850 9.998106 AACTACATACACAAGAGAAACAGTTAT 57.002 29.630 0.00 0.00 0.00 1.89
4301 4851 9.640963 ACTACATACACAAGAGAAACAGTTATC 57.359 33.333 0.00 0.00 0.00 1.75
4302 4852 9.639601 CTACATACACAAGAGAAACAGTTATCA 57.360 33.333 0.00 0.00 0.00 2.15
4303 4853 8.539770 ACATACACAAGAGAAACAGTTATCAG 57.460 34.615 0.00 0.00 0.00 2.90
4305 4855 9.639601 CATACACAAGAGAAACAGTTATCAGTA 57.360 33.333 0.00 0.00 0.00 2.74
4308 4858 7.868415 ACACAAGAGAAACAGTTATCAGTACTC 59.132 37.037 0.00 0.00 0.00 2.59
4309 4859 7.867909 CACAAGAGAAACAGTTATCAGTACTCA 59.132 37.037 0.00 0.00 0.00 3.41
4311 4861 8.300286 CAAGAGAAACAGTTATCAGTACTCAGA 58.700 37.037 0.00 0.00 0.00 3.27
4317 4867 7.094508 ACAGTTATCAGTACTCAGAGACATG 57.905 40.000 3.79 0.00 0.00 3.21
4318 4868 6.887002 ACAGTTATCAGTACTCAGAGACATGA 59.113 38.462 3.79 5.15 0.00 3.07
4331 4881 7.290110 TCAGAGACATGAGAAGTAGAAAACA 57.710 36.000 0.00 0.00 0.00 2.83
4332 4882 7.148641 TCAGAGACATGAGAAGTAGAAAACAC 58.851 38.462 0.00 0.00 0.00 3.32
4334 4884 6.926272 AGAGACATGAGAAGTAGAAAACACAC 59.074 38.462 0.00 0.00 0.00 3.82
4335 4885 6.582636 AGACATGAGAAGTAGAAAACACACA 58.417 36.000 0.00 0.00 0.00 3.72
4336 4886 6.703607 AGACATGAGAAGTAGAAAACACACAG 59.296 38.462 0.00 0.00 0.00 3.66
4337 4887 5.237344 ACATGAGAAGTAGAAAACACACAGC 59.763 40.000 0.00 0.00 0.00 4.40
4353 4904 5.871524 ACACACAGCACAGATTTATCTACAG 59.128 40.000 0.00 0.00 34.85 2.74
4375 4926 1.688197 CAGCAAGGAACCACCACAATT 59.312 47.619 0.00 0.00 42.04 2.32
4381 4932 5.469479 CAAGGAACCACCACAATTATTCAC 58.531 41.667 0.00 0.00 42.04 3.18
4450 5001 3.181499 CGGTAAGATTCAGACAGCTACGT 60.181 47.826 0.00 0.00 0.00 3.57
4465 5016 5.707298 ACAGCTACGTTTACTAGAAGGTGTA 59.293 40.000 12.41 0.00 42.12 2.90
4545 5102 0.401738 CCAGGGGTGAGTGACAACAT 59.598 55.000 0.00 0.00 38.06 2.71
4549 5106 3.007940 CAGGGGTGAGTGACAACATCTAA 59.992 47.826 0.00 0.00 38.06 2.10
4585 5146 6.438425 ACGTAGTTCTTCCCAGGATTAAGTAA 59.562 38.462 0.00 0.00 37.78 2.24
4601 5162 8.195436 GGATTAAGTAATACTACACAGACAGCA 58.805 37.037 0.00 0.00 0.00 4.41
4686 5247 7.761249 CCAACATAGCTCGATAACATCATATCA 59.239 37.037 0.00 0.00 32.84 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.859165 AGGTTTCATTCTGCTCCGAA 57.141 45.000 0.00 0.00 0.00 4.30
1 2 2.859165 AAGGTTTCATTCTGCTCCGA 57.141 45.000 0.00 0.00 0.00 4.55
2 3 5.154222 GTTTAAAGGTTTCATTCTGCTCCG 58.846 41.667 0.00 0.00 0.00 4.63
3 4 6.084326 TGTTTAAAGGTTTCATTCTGCTCC 57.916 37.500 0.00 0.00 0.00 4.70
4 5 8.593492 AAATGTTTAAAGGTTTCATTCTGCTC 57.407 30.769 2.53 0.00 0.00 4.26
5 6 8.424133 AGAAATGTTTAAAGGTTTCATTCTGCT 58.576 29.630 19.46 8.84 34.02 4.24
6 7 8.593492 AGAAATGTTTAAAGGTTTCATTCTGC 57.407 30.769 19.46 7.41 34.02 4.26
48 49 4.799564 TTGCTGGTTAATTGGCCTTAAG 57.200 40.909 3.32 0.00 0.00 1.85
52 53 3.327464 ACATTTTGCTGGTTAATTGGCCT 59.673 39.130 3.32 0.00 0.00 5.19
61 64 3.795877 CAAGTCCAACATTTTGCTGGTT 58.204 40.909 0.00 0.00 35.23 3.67
96 99 7.836842 ACTAAACTTTTCTGTCATTGGTGTTT 58.163 30.769 0.00 0.00 0.00 2.83
114 117 3.688694 TCCGTGTTGCCATACTAAACT 57.311 42.857 0.00 0.00 0.00 2.66
126 129 3.494398 CCCCAAGTATAGGATCCGTGTTG 60.494 52.174 5.98 7.18 0.00 3.33
141 148 2.065799 ACACCTCTTGAATCCCCAAGT 58.934 47.619 0.00 0.00 42.95 3.16
211 221 3.195825 CCCTATCTGTCTCGTTGGTTTCT 59.804 47.826 0.00 0.00 0.00 2.52
218 228 1.867363 AAGGCCCTATCTGTCTCGTT 58.133 50.000 0.00 0.00 0.00 3.85
219 229 1.482593 CAAAGGCCCTATCTGTCTCGT 59.517 52.381 0.00 0.00 0.00 4.18
220 230 1.202580 CCAAAGGCCCTATCTGTCTCG 60.203 57.143 0.00 0.00 0.00 4.04
222 232 1.972588 ACCAAAGGCCCTATCTGTCT 58.027 50.000 0.00 0.00 0.00 3.41
244 255 5.299279 CACCCTACATCAAAAGTCAGTTGTT 59.701 40.000 0.00 0.00 0.00 2.83
320 334 6.491062 TCTGAAAGTCATCCATCAAAATGTGT 59.509 34.615 0.00 0.00 33.76 3.72
326 340 6.298361 TGTTCTCTGAAAGTCATCCATCAAA 58.702 36.000 0.00 0.00 33.76 2.69
398 414 3.667497 ATAGGCATGTGTATGAGGACG 57.333 47.619 0.00 0.00 36.36 4.79
443 460 3.476552 TGACCGGATCATAAATCAAGCC 58.523 45.455 9.46 0.00 29.99 4.35
549 569 2.294449 TCCATAGAGATGACCCCGAG 57.706 55.000 0.00 0.00 34.73 4.63
552 572 4.640647 GTGTTTTTCCATAGAGATGACCCC 59.359 45.833 0.00 0.00 34.73 4.95
553 573 4.332819 CGTGTTTTTCCATAGAGATGACCC 59.667 45.833 0.00 0.00 34.73 4.46
554 574 5.175859 TCGTGTTTTTCCATAGAGATGACC 58.824 41.667 0.00 0.00 34.73 4.02
555 575 5.292101 CCTCGTGTTTTTCCATAGAGATGAC 59.708 44.000 0.00 0.00 34.73 3.06
556 576 5.186992 TCCTCGTGTTTTTCCATAGAGATGA 59.813 40.000 0.00 0.00 34.73 2.92
557 577 5.419542 TCCTCGTGTTTTTCCATAGAGATG 58.580 41.667 0.00 0.00 0.00 2.90
558 578 5.677319 TCCTCGTGTTTTTCCATAGAGAT 57.323 39.130 0.00 0.00 0.00 2.75
559 579 5.186992 TGATCCTCGTGTTTTTCCATAGAGA 59.813 40.000 0.00 0.00 0.00 3.10
560 580 5.419542 TGATCCTCGTGTTTTTCCATAGAG 58.580 41.667 0.00 0.00 0.00 2.43
561 581 5.414789 TGATCCTCGTGTTTTTCCATAGA 57.585 39.130 0.00 0.00 0.00 1.98
562 582 6.683974 AATGATCCTCGTGTTTTTCCATAG 57.316 37.500 0.00 0.00 0.00 2.23
563 583 6.884295 AGAAATGATCCTCGTGTTTTTCCATA 59.116 34.615 0.00 0.00 0.00 2.74
564 584 5.711976 AGAAATGATCCTCGTGTTTTTCCAT 59.288 36.000 0.00 0.00 0.00 3.41
565 585 5.048782 CAGAAATGATCCTCGTGTTTTTCCA 60.049 40.000 0.00 0.00 0.00 3.53
573 594 3.176552 AGAGCAGAAATGATCCTCGTG 57.823 47.619 0.00 0.00 0.00 4.35
579 600 6.765036 TGACCTGAAATAGAGCAGAAATGATC 59.235 38.462 0.00 0.00 34.06 2.92
599 620 7.148239 CGCCTTGATTAATTTCTTTACTGACCT 60.148 37.037 0.00 0.00 0.00 3.85
602 623 6.374333 AGCGCCTTGATTAATTTCTTTACTGA 59.626 34.615 2.29 0.00 0.00 3.41
603 624 6.555315 AGCGCCTTGATTAATTTCTTTACTG 58.445 36.000 2.29 0.00 0.00 2.74
604 625 6.374333 TGAGCGCCTTGATTAATTTCTTTACT 59.626 34.615 2.29 0.00 0.00 2.24
605 626 6.551736 TGAGCGCCTTGATTAATTTCTTTAC 58.448 36.000 2.29 0.00 0.00 2.01
606 627 6.751514 TGAGCGCCTTGATTAATTTCTTTA 57.248 33.333 2.29 0.00 0.00 1.85
607 628 5.643379 TGAGCGCCTTGATTAATTTCTTT 57.357 34.783 2.29 0.00 0.00 2.52
608 629 5.841957 ATGAGCGCCTTGATTAATTTCTT 57.158 34.783 2.29 0.00 0.00 2.52
609 630 5.471456 CCTATGAGCGCCTTGATTAATTTCT 59.529 40.000 2.29 0.00 0.00 2.52
610 631 5.470098 TCCTATGAGCGCCTTGATTAATTTC 59.530 40.000 2.29 0.00 0.00 2.17
611 632 5.376625 TCCTATGAGCGCCTTGATTAATTT 58.623 37.500 2.29 0.00 0.00 1.82
612 633 4.973168 TCCTATGAGCGCCTTGATTAATT 58.027 39.130 2.29 0.00 0.00 1.40
617 638 4.223700 TCATATTCCTATGAGCGCCTTGAT 59.776 41.667 2.29 0.00 39.03 2.57
619 640 3.930336 TCATATTCCTATGAGCGCCTTG 58.070 45.455 2.29 0.00 39.03 3.61
628 649 8.138928 TCATCCAGTAACCTCATATTCCTATG 57.861 38.462 0.00 0.00 36.79 2.23
631 652 5.012561 GCTCATCCAGTAACCTCATATTCCT 59.987 44.000 0.00 0.00 0.00 3.36
632 653 5.241662 GCTCATCCAGTAACCTCATATTCC 58.758 45.833 0.00 0.00 0.00 3.01
633 654 4.926238 CGCTCATCCAGTAACCTCATATTC 59.074 45.833 0.00 0.00 0.00 1.75
634 655 4.800914 GCGCTCATCCAGTAACCTCATATT 60.801 45.833 0.00 0.00 0.00 1.28
635 656 3.306364 GCGCTCATCCAGTAACCTCATAT 60.306 47.826 0.00 0.00 0.00 1.78
637 658 1.202580 GCGCTCATCCAGTAACCTCAT 60.203 52.381 0.00 0.00 0.00 2.90
638 659 0.175760 GCGCTCATCCAGTAACCTCA 59.824 55.000 0.00 0.00 0.00 3.86
639 660 0.461961 AGCGCTCATCCAGTAACCTC 59.538 55.000 2.64 0.00 0.00 3.85
640 661 0.905357 AAGCGCTCATCCAGTAACCT 59.095 50.000 12.06 0.00 0.00 3.50
642 663 0.375106 GCAAGCGCTCATCCAGTAAC 59.625 55.000 12.06 0.00 34.30 2.50
643 664 1.083806 CGCAAGCGCTCATCCAGTAA 61.084 55.000 12.06 0.00 35.30 2.24
644 665 1.519234 CGCAAGCGCTCATCCAGTA 60.519 57.895 12.06 0.00 35.30 2.74
646 697 0.877649 ATACGCAAGCGCTCATCCAG 60.878 55.000 12.06 1.77 44.19 3.86
650 701 2.154854 ATACATACGCAAGCGCTCAT 57.845 45.000 12.06 0.00 44.19 2.90
651 702 1.592543 CAATACATACGCAAGCGCTCA 59.407 47.619 12.06 0.15 44.19 4.26
655 706 1.594518 GCCACAATACATACGCAAGCG 60.595 52.381 13.50 13.50 46.03 4.68
657 708 4.090138 TTTGCCACAATACATACGCAAG 57.910 40.909 0.00 0.00 37.50 4.01
685 736 7.429374 TCATCTGTGGAAGAGATTATGTTCT 57.571 36.000 0.00 0.00 45.88 3.01
686 737 8.498054 TTTCATCTGTGGAAGAGATTATGTTC 57.502 34.615 0.00 0.00 45.88 3.18
687 738 8.868522 TTTTCATCTGTGGAAGAGATTATGTT 57.131 30.769 0.00 0.00 45.88 2.71
689 740 8.733458 TGTTTTTCATCTGTGGAAGAGATTATG 58.267 33.333 0.00 0.00 45.88 1.90
696 748 6.522625 TTTGTGTTTTTCATCTGTGGAAGA 57.477 33.333 0.00 0.00 39.94 2.87
700 752 6.041511 TGACATTTGTGTTTTTCATCTGTGG 58.958 36.000 0.00 0.00 0.00 4.17
721 773 6.128254 GCCCTGTCACTAATTTTCTTACTGAC 60.128 42.308 0.00 0.00 0.00 3.51
730 782 5.362430 TGTTTTCAGCCCTGTCACTAATTTT 59.638 36.000 0.00 0.00 0.00 1.82
753 810 1.476085 ACCACCACATTTGTGTGTGTG 59.524 47.619 20.70 15.86 46.21 3.82
769 826 5.585390 CAGAATTATTCATTCCAGCACCAC 58.415 41.667 7.74 0.00 42.31 4.16
816 879 3.380004 TCGTTGGTTGTTGAGCAATTTCT 59.620 39.130 0.00 0.00 46.39 2.52
817 880 3.485743 GTCGTTGGTTGTTGAGCAATTTC 59.514 43.478 0.00 0.00 46.39 2.17
819 882 2.540769 CGTCGTTGGTTGTTGAGCAATT 60.541 45.455 0.00 0.00 46.39 2.32
821 884 0.375454 CGTCGTTGGTTGTTGAGCAA 59.625 50.000 0.00 0.00 43.06 3.91
828 899 1.091197 GGTTGGTCGTCGTTGGTTGT 61.091 55.000 0.00 0.00 0.00 3.32
835 906 4.353437 GCGAGGGTTGGTCGTCGT 62.353 66.667 8.36 0.00 43.98 4.34
888 964 1.001517 AGAGCAGAGCAGGAGTCGA 60.002 57.895 0.00 0.00 0.00 4.20
960 1037 0.109723 CGAGGAGGAGGAGGAGTAGG 59.890 65.000 0.00 0.00 0.00 3.18
975 1052 3.186047 CCTAACGCCGCAACGAGG 61.186 66.667 1.96 0.00 36.70 4.63
976 1053 3.186047 CCCTAACGCCGCAACGAG 61.186 66.667 1.96 0.00 36.70 4.18
1093 1176 2.683465 GGCTGGAGGAGATGGCCAA 61.683 63.158 10.96 0.00 42.08 4.52
1197 1280 4.845307 GAGGGGAAGGGGGAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
1199 1282 3.711782 AGGAGGGGAAGGGGGAGG 61.712 72.222 0.00 0.00 0.00 4.30
1201 1284 3.707189 GGAGGAGGGGAAGGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
1206 1289 0.692756 GGAAGAGGGAGGAGGGGAAG 60.693 65.000 0.00 0.00 0.00 3.46
1282 1365 2.798368 AGGATAGGATAGGGTGGTCTGT 59.202 50.000 0.00 0.00 0.00 3.41
1292 1380 5.798125 TTTCTGTGCAGAGGATAGGATAG 57.202 43.478 11.47 0.00 38.88 2.08
1293 1381 5.512060 GCATTTCTGTGCAGAGGATAGGATA 60.512 44.000 11.47 0.00 44.43 2.59
1294 1382 4.746089 GCATTTCTGTGCAGAGGATAGGAT 60.746 45.833 11.47 0.00 44.43 3.24
1295 1383 3.432749 GCATTTCTGTGCAGAGGATAGGA 60.433 47.826 11.47 0.00 44.43 2.94
1296 1384 2.877168 GCATTTCTGTGCAGAGGATAGG 59.123 50.000 11.47 0.00 44.43 2.57
1311 1399 4.186159 CACTGAAATGGGGATTGCATTTC 58.814 43.478 2.26 2.26 42.45 2.17
1318 1406 7.182060 AGTATGTTAACACTGAAATGGGGATT 58.818 34.615 11.22 0.00 0.00 3.01
1341 1429 8.411683 CCGAATAATAAACTACTGTACCAGAGT 58.588 37.037 0.00 0.00 35.18 3.24
1342 1430 8.627403 TCCGAATAATAAACTACTGTACCAGAG 58.373 37.037 0.00 0.00 35.18 3.35
1343 1431 8.523915 TCCGAATAATAAACTACTGTACCAGA 57.476 34.615 0.00 0.00 35.18 3.86
1344 1432 9.193133 CATCCGAATAATAAACTACTGTACCAG 57.807 37.037 0.00 0.00 37.52 4.00
1345 1433 8.916062 TCATCCGAATAATAAACTACTGTACCA 58.084 33.333 0.00 0.00 0.00 3.25
1346 1434 9.408069 CTCATCCGAATAATAAACTACTGTACC 57.592 37.037 0.00 0.00 0.00 3.34
1349 1437 8.915036 ACTCTCATCCGAATAATAAACTACTGT 58.085 33.333 0.00 0.00 0.00 3.55
1359 1447 9.915629 GTATGTTTCTACTCTCATCCGAATAAT 57.084 33.333 0.00 0.00 0.00 1.28
1360 1448 8.909923 TGTATGTTTCTACTCTCATCCGAATAA 58.090 33.333 0.00 0.00 0.00 1.40
1361 1449 8.459911 TGTATGTTTCTACTCTCATCCGAATA 57.540 34.615 0.00 0.00 0.00 1.75
1362 1450 7.068839 ACTGTATGTTTCTACTCTCATCCGAAT 59.931 37.037 0.00 0.00 0.00 3.34
1363 1451 6.377429 ACTGTATGTTTCTACTCTCATCCGAA 59.623 38.462 0.00 0.00 0.00 4.30
1364 1452 5.886474 ACTGTATGTTTCTACTCTCATCCGA 59.114 40.000 0.00 0.00 0.00 4.55
1365 1453 6.137794 ACTGTATGTTTCTACTCTCATCCG 57.862 41.667 0.00 0.00 0.00 4.18
1366 1454 8.688151 ACTTACTGTATGTTTCTACTCTCATCC 58.312 37.037 0.90 0.00 0.00 3.51
1369 1457 9.955102 TCTACTTACTGTATGTTTCTACTCTCA 57.045 33.333 11.03 0.00 0.00 3.27
1384 1472 8.598041 GGATGGATATTGGAATCTACTTACTGT 58.402 37.037 0.00 0.00 0.00 3.55
1385 1473 8.597167 TGGATGGATATTGGAATCTACTTACTG 58.403 37.037 0.00 0.00 0.00 2.74
1386 1474 8.742125 TGGATGGATATTGGAATCTACTTACT 57.258 34.615 0.00 0.00 0.00 2.24
1387 1475 9.388506 CATGGATGGATATTGGAATCTACTTAC 57.611 37.037 0.00 0.00 0.00 2.34
1388 1476 9.116080 ACATGGATGGATATTGGAATCTACTTA 57.884 33.333 0.00 0.00 0.00 2.24
1389 1477 7.886970 CACATGGATGGATATTGGAATCTACTT 59.113 37.037 0.00 0.00 0.00 2.24
1390 1478 7.400439 CACATGGATGGATATTGGAATCTACT 58.600 38.462 0.00 0.00 0.00 2.57
1391 1479 6.600822 CCACATGGATGGATATTGGAATCTAC 59.399 42.308 0.00 0.00 43.02 2.59
1392 1480 6.724351 CCACATGGATGGATATTGGAATCTA 58.276 40.000 0.00 0.00 43.02 1.98
1393 1481 5.577100 CCACATGGATGGATATTGGAATCT 58.423 41.667 0.00 0.00 43.02 2.40
1394 1482 4.159135 GCCACATGGATGGATATTGGAATC 59.841 45.833 6.54 0.00 43.02 2.52
1395 1483 4.091549 GCCACATGGATGGATATTGGAAT 58.908 43.478 6.54 0.00 43.02 3.01
1396 1484 3.140707 AGCCACATGGATGGATATTGGAA 59.859 43.478 6.54 0.00 43.02 3.53
1397 1485 2.718062 AGCCACATGGATGGATATTGGA 59.282 45.455 6.54 0.00 43.02 3.53
1398 1486 3.165087 AGCCACATGGATGGATATTGG 57.835 47.619 6.54 0.00 43.02 3.16
1407 1495 4.979657 CTGAGCAGCCACATGGAT 57.020 55.556 0.87 0.00 37.39 3.41
1417 1505 4.060372 AGCTTGTGTGCTGAGCAG 57.940 55.556 7.71 0.00 42.33 4.24
1432 1520 1.006922 GCCACAACAAAGCTCCAGC 60.007 57.895 0.00 0.00 42.49 4.85
1433 1521 0.313043 CTGCCACAACAAAGCTCCAG 59.687 55.000 0.00 0.00 0.00 3.86
1434 1522 1.737355 GCTGCCACAACAAAGCTCCA 61.737 55.000 0.00 0.00 32.82 3.86
1435 1523 1.006922 GCTGCCACAACAAAGCTCC 60.007 57.895 0.00 0.00 32.82 4.70
1436 1524 1.370900 CGCTGCCACAACAAAGCTC 60.371 57.895 0.00 0.00 33.41 4.09
1437 1525 1.174712 ATCGCTGCCACAACAAAGCT 61.175 50.000 0.00 0.00 33.41 3.74
1438 1526 0.318955 AATCGCTGCCACAACAAAGC 60.319 50.000 0.00 0.00 0.00 3.51
1439 1527 2.414559 CCTAATCGCTGCCACAACAAAG 60.415 50.000 0.00 0.00 0.00 2.77
1440 1528 1.539388 CCTAATCGCTGCCACAACAAA 59.461 47.619 0.00 0.00 0.00 2.83
1441 1529 1.164411 CCTAATCGCTGCCACAACAA 58.836 50.000 0.00 0.00 0.00 2.83
1442 1530 0.676466 CCCTAATCGCTGCCACAACA 60.676 55.000 0.00 0.00 0.00 3.33
1443 1531 1.993369 GCCCTAATCGCTGCCACAAC 61.993 60.000 0.00 0.00 0.00 3.32
1444 1532 1.748879 GCCCTAATCGCTGCCACAA 60.749 57.895 0.00 0.00 0.00 3.33
1445 1533 2.124736 GCCCTAATCGCTGCCACA 60.125 61.111 0.00 0.00 0.00 4.17
1446 1534 2.902343 GGCCCTAATCGCTGCCAC 60.902 66.667 0.00 0.00 43.46 5.01
1447 1535 4.545706 CGGCCCTAATCGCTGCCA 62.546 66.667 0.00 0.00 44.22 4.92
1450 1538 2.377628 TAAGCCGGCCCTAATCGCTG 62.378 60.000 26.15 0.00 0.00 5.18
1451 1539 1.481056 ATAAGCCGGCCCTAATCGCT 61.481 55.000 26.15 0.00 0.00 4.93
1452 1540 1.003718 ATAAGCCGGCCCTAATCGC 60.004 57.895 26.15 0.00 0.00 4.58
1453 1541 0.320374 TGATAAGCCGGCCCTAATCG 59.680 55.000 26.15 0.00 0.00 3.34
1454 1542 1.071699 TGTGATAAGCCGGCCCTAATC 59.928 52.381 26.15 20.21 0.00 1.75
1455 1543 1.136828 TGTGATAAGCCGGCCCTAAT 58.863 50.000 26.15 11.75 0.00 1.73
1456 1544 0.179468 GTGTGATAAGCCGGCCCTAA 59.821 55.000 26.15 6.43 0.00 2.69
1457 1545 0.978667 TGTGTGATAAGCCGGCCCTA 60.979 55.000 26.15 16.09 0.00 3.53
1458 1546 1.635817 ATGTGTGATAAGCCGGCCCT 61.636 55.000 26.15 14.06 0.00 5.19
1459 1547 0.751643 AATGTGTGATAAGCCGGCCC 60.752 55.000 26.15 10.94 0.00 5.80
1460 1548 1.102978 AAATGTGTGATAAGCCGGCC 58.897 50.000 26.15 8.39 0.00 6.13
1461 1549 1.798813 GCAAATGTGTGATAAGCCGGC 60.799 52.381 21.89 21.89 0.00 6.13
1462 1550 1.202290 GGCAAATGTGTGATAAGCCGG 60.202 52.381 0.00 0.00 0.00 6.13
1463 1551 1.745087 AGGCAAATGTGTGATAAGCCG 59.255 47.619 0.00 0.00 44.97 5.52
1464 1552 2.099756 GGAGGCAAATGTGTGATAAGCC 59.900 50.000 0.00 0.00 40.85 4.35
1465 1553 3.019564 AGGAGGCAAATGTGTGATAAGC 58.980 45.455 0.00 0.00 0.00 3.09
1466 1554 5.431765 AGTAGGAGGCAAATGTGTGATAAG 58.568 41.667 0.00 0.00 0.00 1.73
1467 1555 5.045942 TGAGTAGGAGGCAAATGTGTGATAA 60.046 40.000 0.00 0.00 0.00 1.75
1468 1556 4.469586 TGAGTAGGAGGCAAATGTGTGATA 59.530 41.667 0.00 0.00 0.00 2.15
1469 1557 3.264193 TGAGTAGGAGGCAAATGTGTGAT 59.736 43.478 0.00 0.00 0.00 3.06
1470 1558 2.637382 TGAGTAGGAGGCAAATGTGTGA 59.363 45.455 0.00 0.00 0.00 3.58
1471 1559 2.744202 GTGAGTAGGAGGCAAATGTGTG 59.256 50.000 0.00 0.00 0.00 3.82
1472 1560 2.290323 GGTGAGTAGGAGGCAAATGTGT 60.290 50.000 0.00 0.00 0.00 3.72
1473 1561 2.026822 AGGTGAGTAGGAGGCAAATGTG 60.027 50.000 0.00 0.00 0.00 3.21
1474 1562 2.026822 CAGGTGAGTAGGAGGCAAATGT 60.027 50.000 0.00 0.00 0.00 2.71
1475 1563 2.636830 CAGGTGAGTAGGAGGCAAATG 58.363 52.381 0.00 0.00 0.00 2.32
1476 1564 1.065126 GCAGGTGAGTAGGAGGCAAAT 60.065 52.381 0.00 0.00 0.00 2.32
1477 1565 0.324943 GCAGGTGAGTAGGAGGCAAA 59.675 55.000 0.00 0.00 0.00 3.68
1478 1566 1.553690 GGCAGGTGAGTAGGAGGCAA 61.554 60.000 0.00 0.00 0.00 4.52
1479 1567 1.990060 GGCAGGTGAGTAGGAGGCA 60.990 63.158 0.00 0.00 0.00 4.75
1480 1568 1.681486 GAGGCAGGTGAGTAGGAGGC 61.681 65.000 0.00 0.00 0.00 4.70
1481 1569 0.324738 TGAGGCAGGTGAGTAGGAGG 60.325 60.000 0.00 0.00 0.00 4.30
1482 1570 1.411977 CATGAGGCAGGTGAGTAGGAG 59.588 57.143 0.00 0.00 0.00 3.69
1483 1571 1.489481 CATGAGGCAGGTGAGTAGGA 58.511 55.000 0.00 0.00 0.00 2.94
1484 1572 0.179062 GCATGAGGCAGGTGAGTAGG 60.179 60.000 0.00 0.00 43.97 3.18
1485 1573 3.376218 GCATGAGGCAGGTGAGTAG 57.624 57.895 0.00 0.00 43.97 2.57
1499 1587 7.038048 TCTGAATATAAAGCGAGATAGGCATG 58.962 38.462 0.00 0.00 0.00 4.06
1518 1606 9.003658 CAGTAAGTAACTCCATTTGTTCTGAAT 57.996 33.333 0.00 0.00 35.76 2.57
1520 1608 6.426937 GCAGTAAGTAACTCCATTTGTTCTGA 59.573 38.462 0.00 0.00 35.76 3.27
1521 1609 6.348540 GGCAGTAAGTAACTCCATTTGTTCTG 60.349 42.308 0.00 0.00 35.76 3.02
1522 1610 5.705905 GGCAGTAAGTAACTCCATTTGTTCT 59.294 40.000 0.00 0.00 35.76 3.01
1523 1611 5.705905 AGGCAGTAAGTAACTCCATTTGTTC 59.294 40.000 0.00 0.00 35.76 3.18
1524 1612 5.473504 CAGGCAGTAAGTAACTCCATTTGTT 59.526 40.000 0.00 0.00 35.76 2.83
1525 1613 5.003804 CAGGCAGTAAGTAACTCCATTTGT 58.996 41.667 0.00 0.00 35.76 2.83
1526 1614 5.245531 TCAGGCAGTAAGTAACTCCATTTG 58.754 41.667 0.00 0.00 35.76 2.32
1573 1661 1.058404 GTCTAAACTGCGGTCGACAC 58.942 55.000 18.91 9.44 0.00 3.67
1604 1692 6.573664 TTAACATTGGAAGGACACAGAATG 57.426 37.500 0.00 0.00 46.00 2.67
1605 1693 6.094048 CGATTAACATTGGAAGGACACAGAAT 59.906 38.462 0.00 0.00 0.00 2.40
1606 1694 5.411361 CGATTAACATTGGAAGGACACAGAA 59.589 40.000 0.00 0.00 0.00 3.02
1607 1695 4.935205 CGATTAACATTGGAAGGACACAGA 59.065 41.667 0.00 0.00 0.00 3.41
1608 1696 4.437390 GCGATTAACATTGGAAGGACACAG 60.437 45.833 0.00 0.00 0.00 3.66
1609 1697 3.438781 GCGATTAACATTGGAAGGACACA 59.561 43.478 0.00 0.00 0.00 3.72
1610 1698 3.438781 TGCGATTAACATTGGAAGGACAC 59.561 43.478 0.00 0.00 0.00 3.67
1611 1699 3.680490 TGCGATTAACATTGGAAGGACA 58.320 40.909 0.00 0.00 0.00 4.02
1612 1700 4.900635 ATGCGATTAACATTGGAAGGAC 57.099 40.909 0.00 0.00 0.00 3.85
1621 1709 2.475111 CGACGGCTAATGCGATTAACAT 59.525 45.455 0.00 0.00 40.82 2.71
1666 1754 4.022068 TCACAAACCCAATTCTGAGCATTC 60.022 41.667 0.00 0.00 0.00 2.67
1694 1782 2.229784 GAGTAAGCCATTTTGCAGCAGT 59.770 45.455 0.00 0.00 0.00 4.40
1699 1787 2.489329 GAGCAGAGTAAGCCATTTTGCA 59.511 45.455 0.00 0.00 32.79 4.08
1703 1791 1.065854 AGCGAGCAGAGTAAGCCATTT 60.066 47.619 0.00 0.00 0.00 2.32
1705 1793 0.179089 CAGCGAGCAGAGTAAGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
1707 1795 2.170434 GCAGCGAGCAGAGTAAGCC 61.170 63.158 0.00 0.00 44.79 4.35
1757 1845 8.543774 ACAAGACTTAAGATATGACAGTTGGAT 58.456 33.333 10.09 0.00 0.00 3.41
1758 1846 7.819415 CACAAGACTTAAGATATGACAGTTGGA 59.181 37.037 10.09 0.00 0.00 3.53
1940 2145 7.750947 ACAGGATAAGTTGAGGTACCTATTT 57.249 36.000 16.29 6.03 0.00 1.40
1977 2182 4.039124 ACAACCACTGCAAAGGAATTTAGG 59.961 41.667 10.83 0.00 0.00 2.69
2013 2218 5.102313 GCAAAGGCATAAGCTACGAAATTT 58.898 37.500 0.00 0.00 41.70 1.82
2130 2336 8.447924 AATGATGAAACCAGTAGAATCTCATG 57.552 34.615 0.00 0.00 0.00 3.07
2170 2390 3.673366 CATTACATGTGCAAGTACAGCG 58.327 45.455 9.11 0.00 33.44 5.18
2302 2522 1.075601 TGGCCAGATCCCAAACTTCT 58.924 50.000 0.00 0.00 0.00 2.85
2379 2600 3.480505 AGTTGGTAAAGCACGGTAAGT 57.519 42.857 0.00 0.00 0.00 2.24
2380 2601 3.810941 TGAAGTTGGTAAAGCACGGTAAG 59.189 43.478 0.00 0.00 0.00 2.34
2381 2602 3.560896 GTGAAGTTGGTAAAGCACGGTAA 59.439 43.478 0.00 0.00 0.00 2.85
2382 2603 3.132925 GTGAAGTTGGTAAAGCACGGTA 58.867 45.455 0.00 0.00 0.00 4.02
2383 2604 1.944709 GTGAAGTTGGTAAAGCACGGT 59.055 47.619 0.00 0.00 0.00 4.83
2384 2605 2.032030 CAGTGAAGTTGGTAAAGCACGG 60.032 50.000 0.00 0.00 0.00 4.94
2385 2606 2.612212 ACAGTGAAGTTGGTAAAGCACG 59.388 45.455 0.00 0.00 0.00 5.34
2627 2853 4.449743 ACAAACGCGTTCACACAATATACT 59.550 37.500 26.77 0.90 0.00 2.12
2693 2919 1.160137 CCGGAAAAGGTCAGCTTCAG 58.840 55.000 0.00 0.00 0.00 3.02
2812 3038 2.289756 GGGTGGTTCAGAGAGAGGAAAC 60.290 54.545 0.00 0.00 0.00 2.78
2843 3069 5.337250 CCCTCGTATTATGCTGGTATGCTAA 60.337 44.000 0.00 0.00 0.00 3.09
2883 3109 8.475639 TCTCCTTGGTTTATATCTTGTACAGTC 58.524 37.037 0.00 0.00 0.00 3.51
2912 3176 8.132362 GTGAAAACAGTACAAACCATTATGTCA 58.868 33.333 0.00 0.00 0.00 3.58
2914 3178 7.430441 GGTGAAAACAGTACAAACCATTATGT 58.570 34.615 0.00 0.00 0.00 2.29
2918 3182 4.100344 GGGGTGAAAACAGTACAAACCATT 59.900 41.667 0.00 0.00 0.00 3.16
2919 3183 3.639561 GGGGTGAAAACAGTACAAACCAT 59.360 43.478 0.00 0.00 0.00 3.55
2920 3184 3.025262 GGGGTGAAAACAGTACAAACCA 58.975 45.455 0.00 0.00 0.00 3.67
2921 3185 2.363038 GGGGGTGAAAACAGTACAAACC 59.637 50.000 0.00 0.00 0.00 3.27
2926 3190 6.350696 GGATTAAATGGGGGTGAAAACAGTAC 60.351 42.308 0.00 0.00 0.00 2.73
2929 3193 4.530161 TGGATTAAATGGGGGTGAAAACAG 59.470 41.667 0.00 0.00 0.00 3.16
2936 3200 3.914771 ACTGATGGATTAAATGGGGGTG 58.085 45.455 0.00 0.00 0.00 4.61
2937 3201 5.948481 ATACTGATGGATTAAATGGGGGT 57.052 39.130 0.00 0.00 0.00 4.95
2938 3202 8.899887 AATAATACTGATGGATTAAATGGGGG 57.100 34.615 0.00 0.00 0.00 5.40
2978 3245 9.449719 GAGACCAAAATCTACTGGAAATTCTAA 57.550 33.333 0.00 0.00 36.49 2.10
2980 3247 6.887002 GGAGACCAAAATCTACTGGAAATTCT 59.113 38.462 0.00 0.00 36.49 2.40
2982 3249 6.794534 AGGAGACCAAAATCTACTGGAAATT 58.205 36.000 0.00 0.00 38.56 1.82
2983 3250 6.394345 AGGAGACCAAAATCTACTGGAAAT 57.606 37.500 0.00 0.00 38.56 2.17
2984 3251 5.843019 AGGAGACCAAAATCTACTGGAAA 57.157 39.130 0.00 0.00 38.56 3.13
2989 3256 6.697641 TTTACCAGGAGACCAAAATCTACT 57.302 37.500 0.00 0.00 40.86 2.57
2990 3257 6.940867 AGTTTTACCAGGAGACCAAAATCTAC 59.059 38.462 0.00 0.00 0.00 2.59
2991 3258 7.086685 AGTTTTACCAGGAGACCAAAATCTA 57.913 36.000 0.00 0.00 0.00 1.98
2992 3259 5.953571 AGTTTTACCAGGAGACCAAAATCT 58.046 37.500 0.00 0.00 0.00 2.40
2993 3260 5.768164 TGAGTTTTACCAGGAGACCAAAATC 59.232 40.000 0.00 0.00 0.00 2.17
2994 3261 5.701224 TGAGTTTTACCAGGAGACCAAAAT 58.299 37.500 0.00 0.00 0.00 1.82
2995 3262 5.118729 TGAGTTTTACCAGGAGACCAAAA 57.881 39.130 0.00 0.00 0.00 2.44
2996 3263 4.781775 TGAGTTTTACCAGGAGACCAAA 57.218 40.909 0.00 0.00 0.00 3.28
2998 3265 3.650942 ACATGAGTTTTACCAGGAGACCA 59.349 43.478 0.00 0.00 0.00 4.02
2999 3266 4.003648 CACATGAGTTTTACCAGGAGACC 58.996 47.826 0.00 0.00 0.00 3.85
3002 3269 3.189287 GCACACATGAGTTTTACCAGGAG 59.811 47.826 0.00 0.00 0.00 3.69
3004 3271 3.149196 AGCACACATGAGTTTTACCAGG 58.851 45.455 0.00 0.00 0.00 4.45
3005 3272 4.997395 AGTAGCACACATGAGTTTTACCAG 59.003 41.667 0.00 0.00 0.00 4.00
3007 3274 7.360946 CCTTTAGTAGCACACATGAGTTTTACC 60.361 40.741 0.00 0.00 0.00 2.85
3008 3275 7.519002 CCTTTAGTAGCACACATGAGTTTTAC 58.481 38.462 0.00 2.92 0.00 2.01
3009 3276 6.148811 GCCTTTAGTAGCACACATGAGTTTTA 59.851 38.462 0.00 0.00 0.00 1.52
3010 3277 5.048713 GCCTTTAGTAGCACACATGAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
3011 3278 4.455877 GCCTTTAGTAGCACACATGAGTTT 59.544 41.667 0.00 0.00 0.00 2.66
3012 3279 4.003648 GCCTTTAGTAGCACACATGAGTT 58.996 43.478 0.00 0.00 0.00 3.01
3013 3280 3.007940 TGCCTTTAGTAGCACACATGAGT 59.992 43.478 0.00 0.00 33.08 3.41
3014 3281 3.599343 TGCCTTTAGTAGCACACATGAG 58.401 45.455 0.00 0.00 33.08 2.90
3015 3282 3.694043 TGCCTTTAGTAGCACACATGA 57.306 42.857 0.00 0.00 33.08 3.07
3016 3283 3.488047 GCATGCCTTTAGTAGCACACATG 60.488 47.826 6.36 0.00 42.84 3.21
3017 3284 2.684881 GCATGCCTTTAGTAGCACACAT 59.315 45.455 6.36 0.00 42.84 3.21
3018 3285 2.083774 GCATGCCTTTAGTAGCACACA 58.916 47.619 6.36 0.00 42.84 3.72
3019 3286 2.359900 AGCATGCCTTTAGTAGCACAC 58.640 47.619 15.66 0.00 42.84 3.82
3020 3287 2.787473 AGCATGCCTTTAGTAGCACA 57.213 45.000 15.66 0.00 42.84 4.57
3021 3288 3.762779 CAAAGCATGCCTTTAGTAGCAC 58.237 45.455 15.66 0.00 41.75 4.40
3034 3301 5.921976 TGAACTTGTATTTCAGCAAAGCATG 59.078 36.000 0.00 0.00 0.00 4.06
3038 3305 7.321271 CGTTAGTGAACTTGTATTTCAGCAAAG 59.679 37.037 0.00 0.00 33.63 2.77
3041 3308 5.178623 CCGTTAGTGAACTTGTATTTCAGCA 59.821 40.000 0.00 0.00 33.63 4.41
3059 3326 2.159572 GCCTTGCACAATGTACCGTTAG 60.160 50.000 0.00 0.00 0.00 2.34
3063 3330 0.595588 TTGCCTTGCACAATGTACCG 59.404 50.000 0.00 0.00 38.71 4.02
3067 3334 3.540314 TTCTTTTGCCTTGCACAATGT 57.460 38.095 0.00 0.00 38.71 2.71
3068 3335 3.364565 GCATTCTTTTGCCTTGCACAATG 60.365 43.478 0.00 0.00 38.71 2.82
3069 3336 2.809696 GCATTCTTTTGCCTTGCACAAT 59.190 40.909 0.00 0.00 38.71 2.71
3070 3337 2.211806 GCATTCTTTTGCCTTGCACAA 58.788 42.857 0.00 0.00 38.71 3.33
3071 3338 1.868469 GCATTCTTTTGCCTTGCACA 58.132 45.000 0.00 0.00 38.71 4.57
3079 3346 2.947448 CCTACAGGGCATTCTTTTGC 57.053 50.000 0.00 0.00 42.01 3.68
3092 3359 0.035630 AAGCAGCCTGAAGCCTACAG 60.036 55.000 0.00 0.00 45.47 2.74
3093 3360 0.401738 AAAGCAGCCTGAAGCCTACA 59.598 50.000 0.00 0.00 45.47 2.74
3094 3361 2.403252 TAAAGCAGCCTGAAGCCTAC 57.597 50.000 0.00 0.00 45.47 3.18
3095 3362 3.433306 TTTAAAGCAGCCTGAAGCCTA 57.567 42.857 0.00 0.00 45.47 3.93
3096 3363 2.292828 TTTAAAGCAGCCTGAAGCCT 57.707 45.000 0.00 0.00 45.47 4.58
3097 3364 3.599730 AATTTAAAGCAGCCTGAAGCC 57.400 42.857 0.00 0.00 45.47 4.35
3098 3365 5.929697 AAAAATTTAAAGCAGCCTGAAGC 57.070 34.783 0.00 0.00 44.25 3.86
3146 3414 4.007659 CTGCGTGGGTTAGGAAAGTAATT 58.992 43.478 0.00 0.00 0.00 1.40
3298 3567 7.848223 TCATACCTTGAACATAATCACACTG 57.152 36.000 0.00 0.00 0.00 3.66
3328 3601 8.358148 AGAACTTTTTGACAGATACTAGAACGA 58.642 33.333 0.00 0.00 0.00 3.85
3329 3602 8.522178 AGAACTTTTTGACAGATACTAGAACG 57.478 34.615 0.00 0.00 0.00 3.95
3333 3606 8.035394 TGGCTAGAACTTTTTGACAGATACTAG 58.965 37.037 0.00 0.00 0.00 2.57
3334 3607 7.903145 TGGCTAGAACTTTTTGACAGATACTA 58.097 34.615 0.00 0.00 0.00 1.82
3339 3669 6.299141 AGAATGGCTAGAACTTTTTGACAGA 58.701 36.000 0.00 0.00 0.00 3.41
3347 3677 4.625083 GCTGGAGAGAATGGCTAGAACTTT 60.625 45.833 0.00 0.00 0.00 2.66
3389 3719 3.681417 CGAAGCAACAACTGAGATGATCA 59.319 43.478 0.00 0.00 36.21 2.92
3427 3757 5.639506 CCCAGTCCTGCGTAGATATAAAATG 59.360 44.000 0.53 0.00 0.00 2.32
3428 3758 5.542635 TCCCAGTCCTGCGTAGATATAAAAT 59.457 40.000 0.53 0.00 0.00 1.82
3432 3762 3.418995 GTCCCAGTCCTGCGTAGATATA 58.581 50.000 0.53 0.00 0.00 0.86
3433 3763 2.240279 GTCCCAGTCCTGCGTAGATAT 58.760 52.381 0.53 0.00 0.00 1.63
3434 3764 1.688772 GTCCCAGTCCTGCGTAGATA 58.311 55.000 0.53 0.00 0.00 1.98
3435 3765 1.043673 GGTCCCAGTCCTGCGTAGAT 61.044 60.000 0.53 0.00 0.00 1.98
3436 3766 1.681327 GGTCCCAGTCCTGCGTAGA 60.681 63.158 0.53 0.00 0.00 2.59
3437 3767 2.893398 GGTCCCAGTCCTGCGTAG 59.107 66.667 0.00 0.00 0.00 3.51
3438 3768 3.066190 CGGTCCCAGTCCTGCGTA 61.066 66.667 0.00 0.00 0.00 4.42
3477 3807 1.893137 ACGAAGCCACACATCTCTGTA 59.107 47.619 0.00 0.00 33.14 2.74
3563 3893 3.638160 AGAAAAATGTCAGCTTGGAGCAA 59.362 39.130 2.47 0.00 45.56 3.91
3572 3902 4.984785 GGAAGGAACAAGAAAAATGTCAGC 59.015 41.667 0.00 0.00 0.00 4.26
3597 3927 1.503542 GTTTCAGAGCATGCCACCG 59.496 57.895 15.66 1.51 0.00 4.94
3647 3977 4.158764 AGACGGAATGAAGAAGAGTTCGAT 59.841 41.667 0.00 0.00 34.02 3.59
3785 4115 2.684881 GGTGAAAATCGATGGTCAGCAT 59.315 45.455 24.81 0.00 38.17 3.79
3826 4156 6.092944 ACACGAGACAGTTTTGTTTACAATCA 59.907 34.615 0.00 0.00 37.76 2.57
3828 4158 6.255215 CACACGAGACAGTTTTGTTTACAAT 58.745 36.000 0.00 0.00 37.76 2.71
3874 4204 4.633126 CAGACACAATACTCCCAGAACATG 59.367 45.833 0.00 0.00 0.00 3.21
3887 4217 1.281867 CCTTGGGGCTCAGACACAATA 59.718 52.381 0.00 0.00 0.00 1.90
3894 4224 3.309296 CTTAGATACCTTGGGGCTCAGA 58.691 50.000 0.00 0.00 35.63 3.27
3946 4280 5.193728 ACCCATCCATTATACAGACCAACTT 59.806 40.000 0.00 0.00 0.00 2.66
3952 4286 7.066284 GCATGATAACCCATCCATTATACAGAC 59.934 40.741 0.00 0.00 32.09 3.51
4143 4527 5.039920 TCTGAGCCATACAAACTGCATAT 57.960 39.130 0.00 0.00 0.00 1.78
4148 4694 9.499479 AAGATTATATCTGAGCCATACAAACTG 57.501 33.333 0.00 0.00 40.13 3.16
4217 4767 7.827819 TTGTTCCGATATCAGTTTTCTACAG 57.172 36.000 3.12 0.00 0.00 2.74
4220 4770 7.881232 AGGTTTTGTTCCGATATCAGTTTTCTA 59.119 33.333 3.12 0.00 0.00 2.10
4227 4777 7.553881 AATACAGGTTTTGTTCCGATATCAG 57.446 36.000 3.12 0.00 41.29 2.90
4235 4785 7.222000 TGGTTGATAATACAGGTTTTGTTCC 57.778 36.000 0.00 0.00 41.29 3.62
4292 4842 7.394641 TCATGTCTCTGAGTACTGATAACTGTT 59.605 37.037 0.00 0.00 0.00 3.16
4294 4844 7.281999 TCTCATGTCTCTGAGTACTGATAACTG 59.718 40.741 0.00 0.00 42.68 3.16
4296 4846 7.561021 TCTCATGTCTCTGAGTACTGATAAC 57.439 40.000 0.00 0.00 42.68 1.89
4297 4847 7.831690 ACTTCTCATGTCTCTGAGTACTGATAA 59.168 37.037 0.00 4.75 42.68 1.75
4298 4848 7.342581 ACTTCTCATGTCTCTGAGTACTGATA 58.657 38.462 0.00 0.00 42.68 2.15
4299 4849 6.186957 ACTTCTCATGTCTCTGAGTACTGAT 58.813 40.000 0.00 0.00 42.68 2.90
4300 4850 5.565509 ACTTCTCATGTCTCTGAGTACTGA 58.434 41.667 0.00 0.00 42.68 3.41
4301 4851 5.895636 ACTTCTCATGTCTCTGAGTACTG 57.104 43.478 0.00 1.30 42.68 2.74
4302 4852 6.953101 TCTACTTCTCATGTCTCTGAGTACT 58.047 40.000 4.32 0.00 42.68 2.73
4303 4853 7.618502 TTCTACTTCTCATGTCTCTGAGTAC 57.381 40.000 4.32 2.82 42.68 2.73
4305 4855 7.014711 TGTTTTCTACTTCTCATGTCTCTGAGT 59.985 37.037 4.32 0.00 42.68 3.41
4308 4858 6.925718 TGTGTTTTCTACTTCTCATGTCTCTG 59.074 38.462 0.00 0.00 0.00 3.35
4309 4859 6.926272 GTGTGTTTTCTACTTCTCATGTCTCT 59.074 38.462 0.00 0.00 0.00 3.10
4311 4861 6.582636 TGTGTGTTTTCTACTTCTCATGTCT 58.417 36.000 0.00 0.00 0.00 3.41
4317 4867 4.570772 TGTGCTGTGTGTTTTCTACTTCTC 59.429 41.667 0.00 0.00 0.00 2.87
4318 4868 4.513442 TGTGCTGTGTGTTTTCTACTTCT 58.487 39.130 0.00 0.00 0.00 2.85
4319 4869 4.570772 TCTGTGCTGTGTGTTTTCTACTTC 59.429 41.667 0.00 0.00 0.00 3.01
4320 4870 4.513442 TCTGTGCTGTGTGTTTTCTACTT 58.487 39.130 0.00 0.00 0.00 2.24
4322 4872 5.424121 AATCTGTGCTGTGTGTTTTCTAC 57.576 39.130 0.00 0.00 0.00 2.59
4324 4874 4.989279 AAATCTGTGCTGTGTGTTTTCT 57.011 36.364 0.00 0.00 0.00 2.52
4326 4876 6.639632 AGATAAATCTGTGCTGTGTGTTTT 57.360 33.333 0.00 0.00 35.42 2.43
4327 4877 6.710295 TGTAGATAAATCTGTGCTGTGTGTTT 59.290 34.615 2.66 0.00 37.76 2.83
4328 4878 6.230472 TGTAGATAAATCTGTGCTGTGTGTT 58.770 36.000 2.66 0.00 37.76 3.32
4329 4879 5.793817 TGTAGATAAATCTGTGCTGTGTGT 58.206 37.500 2.66 0.00 37.76 3.72
4330 4880 5.292834 CCTGTAGATAAATCTGTGCTGTGTG 59.707 44.000 2.66 0.00 37.76 3.82
4331 4881 5.423015 CCTGTAGATAAATCTGTGCTGTGT 58.577 41.667 2.66 0.00 37.76 3.72
4332 4882 4.272018 GCCTGTAGATAAATCTGTGCTGTG 59.728 45.833 2.66 0.00 37.76 3.66
4334 4884 4.445453 TGCCTGTAGATAAATCTGTGCTG 58.555 43.478 2.66 0.00 37.76 4.41
4335 4885 4.701765 CTGCCTGTAGATAAATCTGTGCT 58.298 43.478 2.66 0.00 37.76 4.40
4336 4886 3.249559 GCTGCCTGTAGATAAATCTGTGC 59.750 47.826 2.66 1.47 37.76 4.57
4337 4887 4.445453 TGCTGCCTGTAGATAAATCTGTG 58.555 43.478 2.66 0.00 37.76 3.66
4353 4904 2.203480 TGGTGGTTCCTTGCTGCC 60.203 61.111 0.00 0.00 37.07 4.85
4375 4926 6.486320 TGACATTCAGAAGTTTGCAGTGAATA 59.514 34.615 0.00 0.00 36.04 1.75
4381 4932 3.979495 GCTTGACATTCAGAAGTTTGCAG 59.021 43.478 0.00 0.00 0.00 4.41
4545 5102 6.000219 AGAACTACGTAGTGACTTGGTTAGA 59.000 40.000 28.00 0.00 45.73 2.10
4549 5106 4.022503 GGAAGAACTACGTAGTGACTTGGT 60.023 45.833 33.06 20.53 45.73 3.67
4585 5146 5.652452 TGATGTAGTGCTGTCTGTGTAGTAT 59.348 40.000 0.00 0.00 0.00 2.12
4601 5162 4.141846 CCTTCCTATGCAGTGTGATGTAGT 60.142 45.833 0.00 0.00 0.00 2.73
4686 5247 1.729267 AACACCCCCTGATGCCACTT 61.729 55.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.