Multiple sequence alignment - TraesCS2B01G617000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G617000 chr2B 100.000 4219 0 0 1 4219 793800819 793805037 0.000000e+00 7792.0
1 TraesCS2B01G617000 chr2B 82.584 178 29 1 2642 2819 126949330 126949505 5.650000e-34 156.0
2 TraesCS2B01G617000 chr2B 77.574 272 26 12 2526 2796 21233331 21233568 9.520000e-27 132.0
3 TraesCS2B01G617000 chr2B 82.301 113 20 0 494 606 329465878 329465766 9.650000e-17 99.0
4 TraesCS2B01G617000 chr2B 77.852 149 29 4 341 489 683167778 683167922 5.810000e-14 89.8
5 TraesCS2B01G617000 chrUn 87.880 2302 142 57 1421 3642 124811322 124809078 0.000000e+00 2579.0
6 TraesCS2B01G617000 chrUn 84.016 513 50 12 1 498 124813021 124812526 8.260000e-127 464.0
7 TraesCS2B01G617000 chrUn 80.777 515 50 27 906 1374 124812104 124811593 1.440000e-94 357.0
8 TraesCS2B01G617000 chr3A 89.933 1798 66 44 1786 3503 663176847 663178609 0.000000e+00 2211.0
9 TraesCS2B01G617000 chr3A 81.105 778 44 41 1015 1731 663176116 663176851 1.040000e-145 527.0
10 TraesCS2B01G617000 chr3A 83.099 71 9 3 140 209 654210441 654210373 1.270000e-05 62.1
11 TraesCS2B01G617000 chr2D 85.153 1630 117 49 2280 3845 635789373 635790941 0.000000e+00 1554.0
12 TraesCS2B01G617000 chr2D 87.200 375 34 11 834 1204 635787765 635788129 8.440000e-112 414.0
13 TraesCS2B01G617000 chr2D 89.007 282 16 8 3574 3845 464738642 464738366 6.760000e-88 335.0
14 TraesCS2B01G617000 chr2D 83.529 340 33 12 3894 4219 631409113 631408783 3.190000e-76 296.0
15 TraesCS2B01G617000 chr2D 88.797 241 11 5 3355 3587 464738888 464738656 8.930000e-72 281.0
16 TraesCS2B01G617000 chr2D 96.296 81 3 0 1294 1374 635788212 635788292 2.650000e-27 134.0
17 TraesCS2B01G617000 chr2D 86.538 104 14 0 494 597 130847100 130847203 9.590000e-22 115.0
18 TraesCS2B01G617000 chr2D 78.095 210 25 12 1 201 635786562 635786759 3.450000e-21 113.0
19 TraesCS2B01G617000 chr1D 85.130 538 26 18 3353 3845 2633350 2632822 6.300000e-138 501.0
20 TraesCS2B01G617000 chr1D 77.215 237 46 8 3 234 47725439 47725206 9.520000e-27 132.0
21 TraesCS2B01G617000 chr7D 84.232 241 34 4 11 248 147196211 147196450 9.120000e-57 231.0
22 TraesCS2B01G617000 chr7D 84.348 115 16 1 494 608 595965744 595965632 1.240000e-20 111.0
23 TraesCS2B01G617000 chr7D 91.463 82 3 4 494 573 410511607 410511686 4.460000e-20 110.0
24 TraesCS2B01G617000 chr7D 80.000 150 25 4 342 490 191465096 191465241 5.770000e-19 106.0
25 TraesCS2B01G617000 chr3D 80.851 235 40 5 1 231 539132556 539132323 3.350000e-41 180.0
26 TraesCS2B01G617000 chr5D 80.342 234 39 7 9 236 8490880 8490648 2.020000e-38 171.0
27 TraesCS2B01G617000 chr5D 100.000 28 0 0 744 771 382196215 382196242 8.000000e-03 52.8
28 TraesCS2B01G617000 chr6D 83.708 178 27 1 2642 2819 79067375 79067550 2.610000e-37 167.0
29 TraesCS2B01G617000 chr4D 85.161 155 21 1 2642 2796 316757715 316757867 1.570000e-34 158.0
30 TraesCS2B01G617000 chr4D 86.667 90 12 0 341 430 15878240 15878329 2.680000e-17 100.0
31 TraesCS2B01G617000 chr7B 81.707 164 23 5 76 236 700433949 700434108 3.420000e-26 130.0
32 TraesCS2B01G617000 chr7B 85.714 105 13 2 494 597 453145818 453145715 4.460000e-20 110.0
33 TraesCS2B01G617000 chr2A 82.979 141 20 3 494 634 670667433 670667569 1.590000e-24 124.0
34 TraesCS2B01G617000 chr7A 89.011 91 6 4 495 583 471588438 471588350 4.460000e-20 110.0
35 TraesCS2B01G617000 chr7A 79.054 148 27 3 341 488 219163878 219163735 9.650000e-17 99.0
36 TraesCS2B01G617000 chr6A 84.615 104 16 0 494 597 409129402 409129299 2.070000e-18 104.0
37 TraesCS2B01G617000 chr5B 86.170 94 12 1 494 587 707472694 707472786 2.680000e-17 100.0
38 TraesCS2B01G617000 chr1A 78.125 160 29 3 341 499 547575869 547575715 3.470000e-16 97.1
39 TraesCS2B01G617000 chr3B 78.571 112 23 1 130 241 683322311 683322201 5.850000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G617000 chr2B 793800819 793805037 4218 False 7792.000000 7792 100.000000 1 4219 1 chr2B.!!$F4 4218
1 TraesCS2B01G617000 chrUn 124809078 124813021 3943 True 1133.333333 2579 84.224333 1 3642 3 chrUn.!!$R1 3641
2 TraesCS2B01G617000 chr3A 663176116 663178609 2493 False 1369.000000 2211 85.519000 1015 3503 2 chr3A.!!$F1 2488
3 TraesCS2B01G617000 chr2D 635786562 635790941 4379 False 553.750000 1554 86.686000 1 3845 4 chr2D.!!$F2 3844
4 TraesCS2B01G617000 chr2D 464738366 464738888 522 True 308.000000 335 88.902000 3355 3845 2 chr2D.!!$R2 490
5 TraesCS2B01G617000 chr1D 2632822 2633350 528 True 501.000000 501 85.130000 3353 3845 1 chr1D.!!$R1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
721 1370 0.030235 CGTCGATGGACCGATGCTAA 59.970 55.0 1.93 0.0 40.91 3.09 F
737 1386 0.107654 CTAAGACCCCTTTGGAGGCG 60.108 60.0 0.00 0.0 42.09 5.52 F
1375 2147 0.459585 CGTCTGGGACACCGGTATTG 60.460 60.0 6.87 0.0 44.02 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 2973 0.955428 CTGCACAACAGGCATACGGT 60.955 55.000 0.00 0.0 43.19 4.83 R
2733 3995 0.535780 CCTCAAAGCACTGCTCCACA 60.536 55.000 3.40 0.0 38.25 4.17 R
3222 4497 1.067212 CGGGATTAGCTAGCGTGAACT 59.933 52.381 9.55 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 126 9.927668 AACTGATTGATTTTCATTTAACCGAAT 57.072 25.926 0.00 0.00 0.00 3.34
190 201 4.552365 ATGATCACTGGCGCCCGG 62.552 66.667 26.77 19.37 35.68 5.73
202 213 2.623915 CGCCCGGTACCTATCTCCG 61.624 68.421 10.90 0.37 43.30 4.63
205 216 4.496429 CGGTACCTATCTCCGGCT 57.504 61.111 10.90 0.00 40.49 5.52
234 245 2.414785 CCCGGAAAATGAAGCCCCG 61.415 63.158 0.73 0.00 39.85 5.73
236 247 2.339556 CGGAAAATGAAGCCCCGCA 61.340 57.895 0.00 0.00 33.47 5.69
241 252 0.324645 AAATGAAGCCCCGCATCCTT 60.325 50.000 0.00 0.00 0.00 3.36
243 254 1.925285 ATGAAGCCCCGCATCCTTCA 61.925 55.000 4.97 4.97 46.10 3.02
244 255 2.044946 AAGCCCCGCATCCTTCAC 60.045 61.111 0.00 0.00 0.00 3.18
248 259 4.473520 CCCGCATCCTTCACGGCT 62.474 66.667 0.00 0.00 45.58 5.52
253 264 1.506493 GCATCCTTCACGGCTATGAG 58.494 55.000 0.00 0.00 0.00 2.90
260 271 1.665916 CACGGCTATGAGCATCGGG 60.666 63.158 0.21 0.00 44.75 5.14
282 293 1.653151 GTGAAACTATCCGCCTCCAC 58.347 55.000 0.00 0.00 0.00 4.02
314 336 4.357947 GTGGCCGAGCTGACGACA 62.358 66.667 0.00 0.00 35.09 4.35
328 350 3.425578 CGACATCGTCTTCAGCCTT 57.574 52.632 0.00 0.00 34.11 4.35
335 358 1.964223 TCGTCTTCAGCCTTCTCTTGT 59.036 47.619 0.00 0.00 0.00 3.16
354 377 2.512515 GAGCACCTCATCCACGGC 60.513 66.667 0.00 0.00 0.00 5.68
368 391 4.493747 CGGCCTCGTCGAACTCCC 62.494 72.222 0.00 0.00 29.41 4.30
373 396 0.733729 CCTCGTCGAACTCCCTGTAG 59.266 60.000 0.00 0.00 0.00 2.74
380 403 1.900545 GAACTCCCTGTAGGCGGCTT 61.901 60.000 19.76 0.75 34.51 4.35
392 415 4.913126 CGGCTTCTAACTCCGCTT 57.087 55.556 0.00 0.00 36.53 4.68
394 417 1.084370 CGGCTTCTAACTCCGCTTGG 61.084 60.000 0.00 0.00 36.53 3.61
427 450 1.736645 CCAACTGTCGCGACGGATT 60.737 57.895 45.10 32.48 40.06 3.01
454 477 1.474879 GGGGAGCGATATGACTCTAGC 59.525 57.143 0.00 0.00 33.29 3.42
455 478 2.163509 GGGAGCGATATGACTCTAGCA 58.836 52.381 0.00 0.00 33.29 3.49
456 479 2.558795 GGGAGCGATATGACTCTAGCAA 59.441 50.000 0.00 0.00 33.29 3.91
457 480 3.366883 GGGAGCGATATGACTCTAGCAAG 60.367 52.174 0.00 0.00 33.29 4.01
534 653 2.980233 GGTCGGCTTGCACTTGCT 60.980 61.111 2.33 0.00 42.66 3.91
535 654 1.671054 GGTCGGCTTGCACTTGCTA 60.671 57.895 2.33 0.00 42.66 3.49
584 703 0.966179 TGTCCATGTAGTGAGCACGT 59.034 50.000 0.00 0.00 36.20 4.49
597 716 1.965930 GCACGTGCTTCACCCATGA 60.966 57.895 32.55 0.00 38.21 3.07
598 717 1.915614 GCACGTGCTTCACCCATGAG 61.916 60.000 32.55 0.00 35.83 2.90
605 724 1.945387 CTTCACCCATGAGGATGACG 58.055 55.000 7.17 2.61 39.89 4.35
606 725 1.482182 CTTCACCCATGAGGATGACGA 59.518 52.381 7.17 0.00 39.89 4.20
607 726 0.824109 TCACCCATGAGGATGACGAC 59.176 55.000 7.17 0.00 39.89 4.34
608 727 0.826715 CACCCATGAGGATGACGACT 59.173 55.000 7.17 0.00 39.89 4.18
623 742 2.281484 ACTGACATTTGCCGGCGT 60.281 55.556 23.90 13.86 0.00 5.68
662 792 1.273606 CCTCTACCATAGGCATGTCCG 59.726 57.143 0.00 0.00 40.77 4.79
663 793 0.679505 TCTACCATAGGCATGTCCGC 59.320 55.000 0.00 0.00 40.77 5.54
664 794 0.681733 CTACCATAGGCATGTCCGCT 59.318 55.000 0.00 0.00 40.77 5.52
686 816 1.900351 CCGACCTCCATTGAGCTCA 59.100 57.895 13.74 13.74 37.29 4.26
688 818 1.539929 CCGACCTCCATTGAGCTCATC 60.540 57.143 19.04 9.21 37.29 2.92
694 824 2.625314 CTCCATTGAGCTCATCCGTCTA 59.375 50.000 19.04 0.00 0.00 2.59
700 830 0.452184 AGCTCATCCGTCTACACACG 59.548 55.000 0.00 0.00 39.61 4.49
703 833 0.445043 TCATCCGTCTACACACGTCG 59.555 55.000 0.00 0.00 38.14 5.12
705 835 0.445436 ATCCGTCTACACACGTCGTC 59.555 55.000 0.00 0.00 38.14 4.20
719 1368 2.119029 TCGTCGATGGACCGATGCT 61.119 57.895 4.48 0.00 43.20 3.79
720 1369 0.816421 TCGTCGATGGACCGATGCTA 60.816 55.000 4.48 0.00 43.20 3.49
721 1370 0.030235 CGTCGATGGACCGATGCTAA 59.970 55.000 1.93 0.00 40.91 3.09
722 1371 1.772182 GTCGATGGACCGATGCTAAG 58.228 55.000 0.00 0.00 40.91 2.18
723 1372 1.337071 GTCGATGGACCGATGCTAAGA 59.663 52.381 0.00 0.00 40.91 2.10
725 1374 1.603172 CGATGGACCGATGCTAAGACC 60.603 57.143 0.00 0.00 0.00 3.85
726 1375 0.759346 ATGGACCGATGCTAAGACCC 59.241 55.000 0.00 0.00 0.00 4.46
727 1376 1.335132 TGGACCGATGCTAAGACCCC 61.335 60.000 0.00 0.00 0.00 4.95
730 1379 1.209747 GACCGATGCTAAGACCCCTTT 59.790 52.381 0.00 0.00 33.94 3.11
732 1381 1.668419 CGATGCTAAGACCCCTTTGG 58.332 55.000 0.00 0.00 41.37 3.28
733 1382 1.209504 CGATGCTAAGACCCCTTTGGA 59.790 52.381 0.00 0.00 38.00 3.53
735 1384 0.991920 TGCTAAGACCCCTTTGGAGG 59.008 55.000 0.00 0.00 43.15 4.30
737 1386 0.107654 CTAAGACCCCTTTGGAGGCG 60.108 60.000 0.00 0.00 42.09 5.52
739 1388 1.423794 AAGACCCCTTTGGAGGCGAA 61.424 55.000 0.00 0.00 42.09 4.70
740 1389 1.674651 GACCCCTTTGGAGGCGAAC 60.675 63.158 0.00 0.00 42.09 3.95
741 1390 2.406002 GACCCCTTTGGAGGCGAACA 62.406 60.000 0.00 0.00 42.09 3.18
748 1426 0.821711 TTGGAGGCGAACAGGTTTGG 60.822 55.000 1.84 0.00 0.00 3.28
756 1434 2.347691 GAACAGGTTTGGGGGTCGGT 62.348 60.000 0.00 0.00 0.00 4.69
769 1447 1.296715 GTCGGTGTTGGAGATGCCT 59.703 57.895 0.00 0.00 37.63 4.75
774 1452 2.790433 GGTGTTGGAGATGCCTTTGTA 58.210 47.619 0.00 0.00 37.63 2.41
783 1461 4.378459 GGAGATGCCTTTGTAACTTTGTCG 60.378 45.833 0.00 0.00 0.00 4.35
789 1467 4.094442 GCCTTTGTAACTTTGTCGGATAGG 59.906 45.833 0.00 0.00 0.00 2.57
790 1468 5.484715 CCTTTGTAACTTTGTCGGATAGGA 58.515 41.667 0.00 0.00 0.00 2.94
791 1469 5.581085 CCTTTGTAACTTTGTCGGATAGGAG 59.419 44.000 0.00 0.00 0.00 3.69
807 1485 9.905713 TCGGATAGGAGTAGTTTAGTTTAGTAA 57.094 33.333 0.00 0.00 0.00 2.24
846 1547 4.594920 TGATGTCCACCTCTCTCTCTTTTT 59.405 41.667 0.00 0.00 0.00 1.94
850 1551 2.026729 CCACCTCTCTCTCTTTTTCCCC 60.027 54.545 0.00 0.00 0.00 4.81
852 1553 3.329225 CACCTCTCTCTCTTTTTCCCCTT 59.671 47.826 0.00 0.00 0.00 3.95
853 1554 3.585289 ACCTCTCTCTCTTTTTCCCCTTC 59.415 47.826 0.00 0.00 0.00 3.46
891 1592 1.593196 GGAAAAGCAAAGCAAACCCC 58.407 50.000 0.00 0.00 0.00 4.95
936 1640 5.062308 GCCGACTTGTTTGTAAGTAGATCTG 59.938 44.000 5.18 0.00 40.78 2.90
937 1641 5.062308 CCGACTTGTTTGTAAGTAGATCTGC 59.938 44.000 5.18 3.54 40.78 4.26
938 1642 5.220043 CGACTTGTTTGTAAGTAGATCTGCG 60.220 44.000 5.18 0.00 40.78 5.18
939 1643 5.779922 ACTTGTTTGTAAGTAGATCTGCGA 58.220 37.500 5.18 0.00 39.03 5.10
958 1662 1.038130 ATCCGATCCGATCCGATCCC 61.038 60.000 15.61 0.00 36.13 3.85
1125 1841 2.034048 GCCTCCTCCTCCGATTCACC 62.034 65.000 0.00 0.00 0.00 4.02
1189 1908 7.199078 GCACATGTCTTTCTTTCTTTCTTTCT 58.801 34.615 0.00 0.00 0.00 2.52
1209 1967 4.352893 TCTTTCTTTCCCCCATCAAATCC 58.647 43.478 0.00 0.00 0.00 3.01
1214 1972 2.773525 TCCCCCATCAAATCCAATCC 57.226 50.000 0.00 0.00 0.00 3.01
1287 2049 4.531339 GGATCCCTGATGAGATGAGATGAA 59.469 45.833 0.00 0.00 0.00 2.57
1289 2051 5.963214 TCCCTGATGAGATGAGATGAAAA 57.037 39.130 0.00 0.00 0.00 2.29
1290 2052 6.511017 TCCCTGATGAGATGAGATGAAAAT 57.489 37.500 0.00 0.00 0.00 1.82
1291 2053 6.296803 TCCCTGATGAGATGAGATGAAAATG 58.703 40.000 0.00 0.00 0.00 2.32
1292 2054 6.100714 TCCCTGATGAGATGAGATGAAAATGA 59.899 38.462 0.00 0.00 0.00 2.57
1374 2146 1.610554 CCGTCTGGGACACCGGTATT 61.611 60.000 6.87 0.00 44.02 1.89
1375 2147 0.459585 CGTCTGGGACACCGGTATTG 60.460 60.000 6.87 0.00 44.02 1.90
1377 2149 1.826720 GTCTGGGACACCGGTATTGTA 59.173 52.381 6.87 0.00 44.02 2.41
1394 2166 7.458397 GGTATTGTATTGTATTCCCATCTCCA 58.542 38.462 0.00 0.00 0.00 3.86
1396 2168 6.575244 TTGTATTGTATTCCCATCTCCACT 57.425 37.500 0.00 0.00 0.00 4.00
1397 2169 5.928976 TGTATTGTATTCCCATCTCCACTG 58.071 41.667 0.00 0.00 0.00 3.66
1398 2170 3.931907 TTGTATTCCCATCTCCACTGG 57.068 47.619 0.00 0.00 0.00 4.00
1399 2171 3.129262 TGTATTCCCATCTCCACTGGA 57.871 47.619 0.00 0.00 35.70 3.86
1412 2184 5.391256 TCTCCACTGGACTAGTTTCTTACA 58.609 41.667 0.00 0.00 37.60 2.41
1413 2185 6.017192 TCTCCACTGGACTAGTTTCTTACAT 58.983 40.000 0.00 0.00 37.60 2.29
1415 2187 6.464222 TCCACTGGACTAGTTTCTTACATTG 58.536 40.000 0.00 0.00 37.60 2.82
1435 2431 3.670625 TGATTGAACCGTCTCCGATTTT 58.329 40.909 0.00 0.00 35.63 1.82
1482 2503 6.926313 ACTACACATACTCTCTTTCTCCAAC 58.074 40.000 0.00 0.00 0.00 3.77
1499 2523 3.010250 TCCAACCTCACTACTCTCTGCTA 59.990 47.826 0.00 0.00 0.00 3.49
1575 2604 2.575993 CTGTCCTGCCCTCACTCG 59.424 66.667 0.00 0.00 0.00 4.18
1617 2651 7.728847 TTGCATTGTATATAGTGTGATGGTC 57.271 36.000 0.00 0.00 0.00 4.02
1618 2652 6.825610 TGCATTGTATATAGTGTGATGGTCA 58.174 36.000 0.00 0.00 0.00 4.02
1654 2701 3.914426 TCAAGGAAGATTAGTCCCTGC 57.086 47.619 0.00 0.00 35.59 4.85
1694 2741 7.044181 AGTCTAATGTCACATCTAACACATGG 58.956 38.462 0.00 0.00 29.78 3.66
1726 2773 2.093500 TGACTGCCTGATGCTTTCGTAT 60.093 45.455 0.00 0.00 42.00 3.06
1770 2817 0.461870 CCCACATTGCTGCGCTACTA 60.462 55.000 9.73 0.00 0.00 1.82
1871 2930 3.517296 TCTTAAATGCCCCAGTTCACA 57.483 42.857 0.00 0.00 0.00 3.58
1901 2972 4.874966 AGTTCTGATGATTTAGCTGCTGAC 59.125 41.667 13.43 1.59 0.00 3.51
1902 2973 4.476628 TCTGATGATTTAGCTGCTGACA 57.523 40.909 13.43 7.32 0.00 3.58
1907 2978 2.232696 TGATTTAGCTGCTGACACCGTA 59.767 45.455 13.43 0.00 0.00 4.02
2096 3210 4.287238 AGTTTTGCAACCAAACTACTCG 57.713 40.909 12.26 0.00 40.45 4.18
2099 3213 3.472283 TTGCAACCAAACTACTCGGTA 57.528 42.857 0.00 0.00 31.12 4.02
2246 3452 4.024641 GGGTACAACAGTTTTTCACTACCG 60.025 45.833 0.00 0.00 31.86 4.02
2391 3614 0.953471 CCCGCCGAGAAACATTCACA 60.953 55.000 0.00 0.00 0.00 3.58
2427 3650 1.132881 TGGGCCAAGGAAATTGACCTT 60.133 47.619 2.13 10.28 47.00 3.50
2733 3995 3.705604 CAGTGCGAAAACCAAAGTGAAT 58.294 40.909 0.00 0.00 0.00 2.57
2960 4231 2.983907 TGTTGGTCGGTCTTGTTACA 57.016 45.000 0.00 0.00 0.00 2.41
3016 4291 9.757227 AGAAATACTTACTAGTGCAGATGATTC 57.243 33.333 5.39 6.91 35.78 2.52
3017 4292 9.534565 GAAATACTTACTAGTGCAGATGATTCA 57.465 33.333 5.39 0.00 35.78 2.57
3018 4293 9.539825 AAATACTTACTAGTGCAGATGATTCAG 57.460 33.333 5.39 0.00 35.78 3.02
3019 4294 5.355596 ACTTACTAGTGCAGATGATTCAGC 58.644 41.667 5.39 0.00 35.12 4.26
3020 4295 3.900966 ACTAGTGCAGATGATTCAGCA 57.099 42.857 4.52 0.00 41.50 4.41
3021 4296 3.794717 ACTAGTGCAGATGATTCAGCAG 58.205 45.455 4.52 0.00 43.96 4.24
3022 4297 2.783609 AGTGCAGATGATTCAGCAGT 57.216 45.000 4.52 3.03 43.96 4.40
3099 4374 1.673993 ATGAATGTTGCCCGCACGA 60.674 52.632 0.00 0.00 0.00 4.35
3100 4375 1.031571 ATGAATGTTGCCCGCACGAT 61.032 50.000 0.00 0.00 0.00 3.73
3223 4498 3.611433 GCGGCTGCTGTTGATTTAG 57.389 52.632 11.21 0.00 38.39 1.85
3285 4588 5.051106 GGATGGATGAAAACGTTTGTTGTTG 60.051 40.000 15.46 0.00 38.62 3.33
3287 4590 3.553917 GGATGAAAACGTTTGTTGTTGGG 59.446 43.478 15.46 0.00 38.62 4.12
3292 4595 2.658373 ACGTTTGTTGTTGGGGAAAC 57.342 45.000 0.00 0.00 39.41 2.78
3304 4615 5.439721 TGTTGGGGAAACTGATGATATCTG 58.560 41.667 3.98 0.00 39.70 2.90
3305 4616 4.090761 TGGGGAAACTGATGATATCTGC 57.909 45.455 3.98 0.00 0.00 4.26
3306 4617 3.181440 TGGGGAAACTGATGATATCTGCC 60.181 47.826 3.98 0.00 0.00 4.85
3307 4618 3.070018 GGGAAACTGATGATATCTGCCG 58.930 50.000 3.98 0.00 0.00 5.69
3308 4619 3.495100 GGGAAACTGATGATATCTGCCGT 60.495 47.826 3.98 0.00 0.00 5.68
3309 4620 4.130118 GGAAACTGATGATATCTGCCGTT 58.870 43.478 3.98 2.44 0.00 4.44
3327 4655 4.207429 GCCGTTGTTTTATTTCGCTTTTGA 59.793 37.500 0.00 0.00 0.00 2.69
3382 4710 0.178767 TCGGTCAATGCTCCTCATGG 59.821 55.000 0.00 0.00 35.13 3.66
3481 4830 7.921786 AAATTTACTCACGAGGAATCAATCA 57.078 32.000 0.00 0.00 30.03 2.57
3498 4847 9.325150 GAATCAATCAATTTGTGCTGAAATTTG 57.675 29.630 0.00 2.34 34.05 2.32
3526 4875 5.418840 TGTGCATATAGACAGACAGACAGAA 59.581 40.000 0.00 0.00 0.00 3.02
3538 4887 5.762218 CAGACAGACAGAAATCAAGTTCCTT 59.238 40.000 0.00 0.00 0.00 3.36
3622 5037 1.560004 AACTCGTGCACGCAGACATG 61.560 55.000 33.63 17.68 39.60 3.21
3656 5071 5.048154 AGAGAGCTCCAAGAAAAAGATTTGC 60.048 40.000 10.93 0.00 0.00 3.68
3761 5176 3.315191 CCCAAACACGTTCAGAGAACATT 59.685 43.478 10.15 0.00 0.00 2.71
3762 5177 4.202010 CCCAAACACGTTCAGAGAACATTT 60.202 41.667 10.15 4.85 0.00 2.32
3764 5179 6.459024 CCCAAACACGTTCAGAGAACATTTAA 60.459 38.462 10.15 0.00 0.00 1.52
3768 5183 9.581099 AAACACGTTCAGAGAACATTTAATTTT 57.419 25.926 10.15 0.00 0.00 1.82
3845 5287 8.559536 TGTCTCAATTCTGCTTAAAGTTTACTG 58.440 33.333 0.00 0.00 0.00 2.74
3846 5288 8.560374 GTCTCAATTCTGCTTAAAGTTTACTGT 58.440 33.333 0.00 0.00 0.00 3.55
3847 5289 9.120538 TCTCAATTCTGCTTAAAGTTTACTGTT 57.879 29.630 0.00 0.00 0.00 3.16
3854 5296 8.833493 TCTGCTTAAAGTTTACTGTTAAGAACC 58.167 33.333 18.29 9.02 37.11 3.62
3855 5297 8.508883 TGCTTAAAGTTTACTGTTAAGAACCA 57.491 30.769 18.29 10.44 37.11 3.67
3856 5298 8.958506 TGCTTAAAGTTTACTGTTAAGAACCAA 58.041 29.630 18.29 5.52 37.11 3.67
3857 5299 9.229784 GCTTAAAGTTTACTGTTAAGAACCAAC 57.770 33.333 18.29 0.00 37.11 3.77
3858 5300 9.726232 CTTAAAGTTTACTGTTAAGAACCAACC 57.274 33.333 13.43 0.00 37.11 3.77
3859 5301 5.996669 AGTTTACTGTTAAGAACCAACCG 57.003 39.130 0.00 0.00 0.00 4.44
3860 5302 5.673514 AGTTTACTGTTAAGAACCAACCGA 58.326 37.500 0.00 0.00 0.00 4.69
3861 5303 5.525012 AGTTTACTGTTAAGAACCAACCGAC 59.475 40.000 0.00 0.00 0.00 4.79
3862 5304 2.476821 ACTGTTAAGAACCAACCGACG 58.523 47.619 0.00 0.00 0.00 5.12
3863 5305 2.159057 ACTGTTAAGAACCAACCGACGT 60.159 45.455 0.00 0.00 0.00 4.34
3864 5306 2.203401 TGTTAAGAACCAACCGACGTG 58.797 47.619 0.00 0.00 0.00 4.49
3865 5307 2.204237 GTTAAGAACCAACCGACGTGT 58.796 47.619 0.00 0.00 0.00 4.49
3866 5308 2.138596 TAAGAACCAACCGACGTGTC 57.861 50.000 0.00 0.00 0.00 3.67
3867 5309 0.531311 AAGAACCAACCGACGTGTCC 60.531 55.000 0.00 0.00 0.00 4.02
3868 5310 1.068585 GAACCAACCGACGTGTCCT 59.931 57.895 0.00 0.00 0.00 3.85
3869 5311 0.531311 GAACCAACCGACGTGTCCTT 60.531 55.000 0.00 0.00 0.00 3.36
3870 5312 0.752054 AACCAACCGACGTGTCCTTA 59.248 50.000 0.00 0.00 0.00 2.69
3871 5313 0.752054 ACCAACCGACGTGTCCTTAA 59.248 50.000 0.00 0.00 0.00 1.85
3872 5314 1.142474 CCAACCGACGTGTCCTTAAC 58.858 55.000 0.00 0.00 0.00 2.01
3873 5315 1.538634 CCAACCGACGTGTCCTTAACA 60.539 52.381 0.00 0.00 34.78 2.41
3874 5316 2.409975 CAACCGACGTGTCCTTAACAT 58.590 47.619 0.00 0.00 40.80 2.71
3876 5318 0.719465 CCGACGTGTCCTTAACATGC 59.281 55.000 0.00 0.00 46.98 4.06
3877 5319 0.719465 CGACGTGTCCTTAACATGCC 59.281 55.000 0.00 0.00 46.98 4.40
3878 5320 0.719465 GACGTGTCCTTAACATGCCG 59.281 55.000 0.00 0.00 46.98 5.69
3879 5321 0.319083 ACGTGTCCTTAACATGCCGA 59.681 50.000 0.00 0.00 46.98 5.54
3880 5322 1.066430 ACGTGTCCTTAACATGCCGAT 60.066 47.619 0.00 0.00 46.98 4.18
3881 5323 2.006888 CGTGTCCTTAACATGCCGATT 58.993 47.619 0.00 0.00 40.80 3.34
3882 5324 2.030457 CGTGTCCTTAACATGCCGATTC 59.970 50.000 0.00 0.00 40.80 2.52
3883 5325 2.030457 GTGTCCTTAACATGCCGATTCG 59.970 50.000 0.00 0.00 40.80 3.34
3884 5326 1.003866 GTCCTTAACATGCCGATTCGC 60.004 52.381 0.00 0.00 0.00 4.70
3885 5327 0.307760 CCTTAACATGCCGATTCGCC 59.692 55.000 0.00 0.00 0.00 5.54
3886 5328 0.307760 CTTAACATGCCGATTCGCCC 59.692 55.000 0.00 0.00 0.00 6.13
3887 5329 1.098712 TTAACATGCCGATTCGCCCC 61.099 55.000 0.00 0.00 0.00 5.80
3888 5330 1.978455 TAACATGCCGATTCGCCCCT 61.978 55.000 0.00 0.00 0.00 4.79
3889 5331 3.282157 CATGCCGATTCGCCCCTG 61.282 66.667 0.00 0.00 0.00 4.45
3893 5335 2.504032 CCGATTCGCCCCTGCTTA 59.496 61.111 0.00 0.00 34.43 3.09
3894 5336 1.153249 CCGATTCGCCCCTGCTTAA 60.153 57.895 0.00 0.00 34.43 1.85
3895 5337 0.746563 CCGATTCGCCCCTGCTTAAA 60.747 55.000 0.00 0.00 34.43 1.52
3896 5338 0.377203 CGATTCGCCCCTGCTTAAAC 59.623 55.000 0.00 0.00 34.43 2.01
3897 5339 0.738975 GATTCGCCCCTGCTTAAACC 59.261 55.000 0.00 0.00 34.43 3.27
3898 5340 0.039035 ATTCGCCCCTGCTTAAACCA 59.961 50.000 0.00 0.00 34.43 3.67
3899 5341 0.178987 TTCGCCCCTGCTTAAACCAA 60.179 50.000 0.00 0.00 34.43 3.67
3900 5342 0.178987 TCGCCCCTGCTTAAACCAAA 60.179 50.000 0.00 0.00 34.43 3.28
3901 5343 0.894835 CGCCCCTGCTTAAACCAAAT 59.105 50.000 0.00 0.00 34.43 2.32
3902 5344 1.275010 CGCCCCTGCTTAAACCAAATT 59.725 47.619 0.00 0.00 34.43 1.82
3903 5345 2.494073 CGCCCCTGCTTAAACCAAATTA 59.506 45.455 0.00 0.00 34.43 1.40
3904 5346 3.056465 CGCCCCTGCTTAAACCAAATTAA 60.056 43.478 0.00 0.00 34.43 1.40
3905 5347 4.250464 GCCCCTGCTTAAACCAAATTAAC 58.750 43.478 0.00 0.00 33.53 2.01
3906 5348 4.827692 CCCCTGCTTAAACCAAATTAACC 58.172 43.478 0.00 0.00 0.00 2.85
3907 5349 4.284746 CCCCTGCTTAAACCAAATTAACCA 59.715 41.667 0.00 0.00 0.00 3.67
3908 5350 5.221742 CCCCTGCTTAAACCAAATTAACCAA 60.222 40.000 0.00 0.00 0.00 3.67
3909 5351 5.699001 CCCTGCTTAAACCAAATTAACCAAC 59.301 40.000 0.00 0.00 0.00 3.77
3910 5352 6.284459 CCTGCTTAAACCAAATTAACCAACA 58.716 36.000 0.00 0.00 0.00 3.33
3911 5353 6.763610 CCTGCTTAAACCAAATTAACCAACAA 59.236 34.615 0.00 0.00 0.00 2.83
3912 5354 7.443879 CCTGCTTAAACCAAATTAACCAACAAT 59.556 33.333 0.00 0.00 0.00 2.71
3913 5355 8.738645 TGCTTAAACCAAATTAACCAACAATT 57.261 26.923 0.00 0.00 0.00 2.32
3914 5356 9.178758 TGCTTAAACCAAATTAACCAACAATTT 57.821 25.926 0.00 0.00 36.31 1.82
3915 5357 9.444534 GCTTAAACCAAATTAACCAACAATTTG 57.555 29.630 11.68 11.68 46.10 2.32
3916 5358 9.444534 CTTAAACCAAATTAACCAACAATTTGC 57.555 29.630 12.75 0.00 45.58 3.68
3917 5359 6.384258 AACCAAATTAACCAACAATTTGCC 57.616 33.333 12.75 0.00 45.58 4.52
3918 5360 5.440610 ACCAAATTAACCAACAATTTGCCA 58.559 33.333 12.75 0.00 45.58 4.92
3919 5361 6.067350 ACCAAATTAACCAACAATTTGCCAT 58.933 32.000 12.75 1.69 45.58 4.40
3920 5362 6.548993 ACCAAATTAACCAACAATTTGCCATT 59.451 30.769 12.75 0.00 45.58 3.16
3921 5363 7.083230 CCAAATTAACCAACAATTTGCCATTC 58.917 34.615 12.75 0.00 45.58 2.67
3922 5364 7.040548 CCAAATTAACCAACAATTTGCCATTCT 60.041 33.333 12.75 0.00 45.58 2.40
3923 5365 8.351461 CAAATTAACCAACAATTTGCCATTCTT 58.649 29.630 7.39 0.00 42.91 2.52
3924 5366 8.462589 AATTAACCAACAATTTGCCATTCTTT 57.537 26.923 0.00 0.00 0.00 2.52
3925 5367 5.754543 AACCAACAATTTGCCATTCTTTG 57.245 34.783 0.00 0.00 0.00 2.77
3926 5368 5.033589 ACCAACAATTTGCCATTCTTTGA 57.966 34.783 0.00 0.00 0.00 2.69
3927 5369 4.815846 ACCAACAATTTGCCATTCTTTGAC 59.184 37.500 0.00 0.00 0.00 3.18
3928 5370 4.815308 CCAACAATTTGCCATTCTTTGACA 59.185 37.500 0.00 0.00 0.00 3.58
3929 5371 5.296283 CCAACAATTTGCCATTCTTTGACAA 59.704 36.000 0.00 0.00 0.00 3.18
3930 5372 6.423862 CAACAATTTGCCATTCTTTGACAAG 58.576 36.000 0.00 0.00 0.00 3.16
3931 5373 5.916318 ACAATTTGCCATTCTTTGACAAGA 58.084 33.333 0.00 0.00 37.24 3.02
3932 5374 6.527423 ACAATTTGCCATTCTTTGACAAGAT 58.473 32.000 0.00 0.00 38.89 2.40
3933 5375 7.669427 ACAATTTGCCATTCTTTGACAAGATA 58.331 30.769 0.00 0.00 38.89 1.98
3934 5376 7.816031 ACAATTTGCCATTCTTTGACAAGATAG 59.184 33.333 0.00 0.00 38.89 2.08
3935 5377 5.902613 TTGCCATTCTTTGACAAGATAGG 57.097 39.130 0.00 0.00 38.89 2.57
3936 5378 5.178096 TGCCATTCTTTGACAAGATAGGA 57.822 39.130 7.17 0.00 38.89 2.94
3937 5379 5.569355 TGCCATTCTTTGACAAGATAGGAA 58.431 37.500 7.17 0.00 38.89 3.36
3938 5380 6.009589 TGCCATTCTTTGACAAGATAGGAAA 58.990 36.000 7.17 0.00 38.89 3.13
3939 5381 6.493115 TGCCATTCTTTGACAAGATAGGAAAA 59.507 34.615 7.17 0.00 38.89 2.29
3940 5382 6.808704 GCCATTCTTTGACAAGATAGGAAAAC 59.191 38.462 7.17 0.00 38.89 2.43
3941 5383 7.309438 GCCATTCTTTGACAAGATAGGAAAACT 60.309 37.037 7.17 0.00 38.89 2.66
3942 5384 8.025445 CCATTCTTTGACAAGATAGGAAAACTG 58.975 37.037 0.00 0.00 38.89 3.16
3943 5385 8.786898 CATTCTTTGACAAGATAGGAAAACTGA 58.213 33.333 0.00 0.00 38.89 3.41
3944 5386 8.924511 TTCTTTGACAAGATAGGAAAACTGAT 57.075 30.769 0.00 0.00 38.89 2.90
3946 5388 9.436957 TCTTTGACAAGATAGGAAAACTGATAC 57.563 33.333 0.00 0.00 33.80 2.24
3947 5389 9.219603 CTTTGACAAGATAGGAAAACTGATACA 57.780 33.333 0.00 0.00 30.57 2.29
3948 5390 8.777865 TTGACAAGATAGGAAAACTGATACAG 57.222 34.615 0.00 0.00 37.52 2.74
3949 5391 8.134202 TGACAAGATAGGAAAACTGATACAGA 57.866 34.615 5.76 0.00 35.18 3.41
3950 5392 8.762645 TGACAAGATAGGAAAACTGATACAGAT 58.237 33.333 5.76 0.00 35.18 2.90
3951 5393 9.255304 GACAAGATAGGAAAACTGATACAGATC 57.745 37.037 5.76 0.00 35.18 2.75
3952 5394 8.762645 ACAAGATAGGAAAACTGATACAGATCA 58.237 33.333 5.76 0.00 39.88 2.92
3966 5408 8.260270 TGATACAGATCAGTTTGTCAAATCTG 57.740 34.615 18.67 18.67 45.60 2.90
3967 5409 5.368256 ACAGATCAGTTTGTCAAATCTGC 57.632 39.130 19.61 9.94 44.54 4.26
3968 5410 4.217118 ACAGATCAGTTTGTCAAATCTGCC 59.783 41.667 19.61 13.91 44.54 4.85
3969 5411 4.216902 CAGATCAGTTTGTCAAATCTGCCA 59.783 41.667 16.63 7.10 37.57 4.92
3970 5412 3.988379 TCAGTTTGTCAAATCTGCCAC 57.012 42.857 16.63 0.00 0.00 5.01
3971 5413 2.622942 TCAGTTTGTCAAATCTGCCACC 59.377 45.455 16.63 0.00 0.00 4.61
3972 5414 2.361757 CAGTTTGTCAAATCTGCCACCA 59.638 45.455 0.40 0.00 0.00 4.17
3973 5415 3.030291 AGTTTGTCAAATCTGCCACCAA 58.970 40.909 0.40 0.00 0.00 3.67
3974 5416 3.450457 AGTTTGTCAAATCTGCCACCAAA 59.550 39.130 0.40 0.00 0.00 3.28
3975 5417 3.731652 TTGTCAAATCTGCCACCAAAG 57.268 42.857 0.00 0.00 0.00 2.77
3976 5418 1.962807 TGTCAAATCTGCCACCAAAGG 59.037 47.619 0.00 0.00 0.00 3.11
3986 5428 2.459555 CCACCAAAGGCCATCCTATT 57.540 50.000 5.01 0.00 43.40 1.73
3987 5429 3.593442 CCACCAAAGGCCATCCTATTA 57.407 47.619 5.01 0.00 43.40 0.98
3988 5430 3.490348 CCACCAAAGGCCATCCTATTAG 58.510 50.000 5.01 0.00 43.40 1.73
3989 5431 3.138283 CCACCAAAGGCCATCCTATTAGA 59.862 47.826 5.01 0.00 43.40 2.10
3990 5432 4.202609 CCACCAAAGGCCATCCTATTAGAT 60.203 45.833 5.01 0.00 43.40 1.98
3991 5433 5.388654 CACCAAAGGCCATCCTATTAGATT 58.611 41.667 5.01 0.00 43.40 2.40
3992 5434 5.835280 CACCAAAGGCCATCCTATTAGATTT 59.165 40.000 5.01 0.00 43.40 2.17
3993 5435 7.004086 CACCAAAGGCCATCCTATTAGATTTA 58.996 38.462 5.01 0.00 43.40 1.40
3994 5436 7.004691 ACCAAAGGCCATCCTATTAGATTTAC 58.995 38.462 5.01 0.00 43.40 2.01
3995 5437 6.434340 CCAAAGGCCATCCTATTAGATTTACC 59.566 42.308 5.01 0.00 43.40 2.85
3996 5438 7.234355 CAAAGGCCATCCTATTAGATTTACCT 58.766 38.462 5.01 0.00 43.40 3.08
3997 5439 6.380079 AGGCCATCCTATTAGATTTACCTG 57.620 41.667 5.01 0.00 42.06 4.00
3998 5440 6.091555 AGGCCATCCTATTAGATTTACCTGA 58.908 40.000 5.01 0.00 42.06 3.86
3999 5441 6.737608 AGGCCATCCTATTAGATTTACCTGAT 59.262 38.462 5.01 0.00 42.06 2.90
4000 5442 7.051000 GGCCATCCTATTAGATTTACCTGATC 58.949 42.308 0.00 0.00 0.00 2.92
4001 5443 7.311297 GGCCATCCTATTAGATTTACCTGATCA 60.311 40.741 0.00 0.00 0.00 2.92
4002 5444 8.270744 GCCATCCTATTAGATTTACCTGATCAT 58.729 37.037 0.00 0.00 0.00 2.45
4003 5445 9.610705 CCATCCTATTAGATTTACCTGATCATG 57.389 37.037 0.00 0.00 0.00 3.07
4004 5446 9.107177 CATCCTATTAGATTTACCTGATCATGC 57.893 37.037 0.00 0.00 0.00 4.06
4005 5447 8.206126 TCCTATTAGATTTACCTGATCATGCA 57.794 34.615 0.00 0.00 0.00 3.96
4006 5448 8.829746 TCCTATTAGATTTACCTGATCATGCAT 58.170 33.333 0.00 0.00 0.00 3.96
4007 5449 8.890718 CCTATTAGATTTACCTGATCATGCATG 58.109 37.037 21.07 21.07 0.00 4.06
4008 5450 9.445878 CTATTAGATTTACCTGATCATGCATGT 57.554 33.333 25.43 13.42 0.00 3.21
4010 5452 8.607441 TTAGATTTACCTGATCATGCATGTAC 57.393 34.615 25.43 19.47 0.00 2.90
4011 5453 6.594744 AGATTTACCTGATCATGCATGTACA 58.405 36.000 25.43 22.41 0.00 2.90
4012 5454 7.056006 AGATTTACCTGATCATGCATGTACAA 58.944 34.615 25.43 7.44 0.00 2.41
4013 5455 7.557358 AGATTTACCTGATCATGCATGTACAAA 59.443 33.333 25.43 16.20 0.00 2.83
4014 5456 7.459795 TTTACCTGATCATGCATGTACAAAA 57.540 32.000 25.43 18.18 0.00 2.44
4015 5457 5.314923 ACCTGATCATGCATGTACAAAAC 57.685 39.130 25.43 6.15 0.00 2.43
4016 5458 4.158394 ACCTGATCATGCATGTACAAAACC 59.842 41.667 25.43 0.00 0.00 3.27
4017 5459 4.158209 CCTGATCATGCATGTACAAAACCA 59.842 41.667 25.43 2.08 0.00 3.67
4018 5460 5.313520 TGATCATGCATGTACAAAACCAG 57.686 39.130 25.43 0.00 0.00 4.00
4019 5461 4.766373 TGATCATGCATGTACAAAACCAGT 59.234 37.500 25.43 0.00 0.00 4.00
4020 5462 5.243507 TGATCATGCATGTACAAAACCAGTT 59.756 36.000 25.43 0.00 0.00 3.16
4021 5463 4.869215 TCATGCATGTACAAAACCAGTTG 58.131 39.130 25.43 0.00 34.52 3.16
4022 5464 4.582240 TCATGCATGTACAAAACCAGTTGA 59.418 37.500 25.43 0.00 32.59 3.18
4023 5465 4.991153 TGCATGTACAAAACCAGTTGAA 57.009 36.364 0.00 0.00 32.59 2.69
4024 5466 4.930963 TGCATGTACAAAACCAGTTGAAG 58.069 39.130 0.00 0.00 32.59 3.02
4025 5467 4.400884 TGCATGTACAAAACCAGTTGAAGT 59.599 37.500 0.00 0.00 32.59 3.01
4026 5468 5.590663 TGCATGTACAAAACCAGTTGAAGTA 59.409 36.000 0.00 0.00 32.59 2.24
4027 5469 6.142817 GCATGTACAAAACCAGTTGAAGTAG 58.857 40.000 0.00 0.00 32.59 2.57
4028 5470 5.744666 TGTACAAAACCAGTTGAAGTAGC 57.255 39.130 0.00 0.00 32.59 3.58
4029 5471 5.433526 TGTACAAAACCAGTTGAAGTAGCT 58.566 37.500 0.00 0.00 32.59 3.32
4030 5472 4.900635 ACAAAACCAGTTGAAGTAGCTG 57.099 40.909 0.00 0.00 37.37 4.24
4035 5477 2.462456 CAGTTGAAGTAGCTGGCTGA 57.538 50.000 5.25 0.00 34.33 4.26
4036 5478 2.983229 CAGTTGAAGTAGCTGGCTGAT 58.017 47.619 5.25 0.00 34.33 2.90
4037 5479 3.341823 CAGTTGAAGTAGCTGGCTGATT 58.658 45.455 5.25 0.00 34.33 2.57
4038 5480 3.755378 CAGTTGAAGTAGCTGGCTGATTT 59.245 43.478 5.25 0.00 34.33 2.17
4039 5481 4.006319 AGTTGAAGTAGCTGGCTGATTTC 58.994 43.478 5.25 6.90 0.00 2.17
4040 5482 3.701205 TGAAGTAGCTGGCTGATTTCA 57.299 42.857 5.25 9.10 0.00 2.69
4041 5483 4.019792 TGAAGTAGCTGGCTGATTTCAA 57.980 40.909 5.25 0.00 0.00 2.69
4042 5484 3.753272 TGAAGTAGCTGGCTGATTTCAAC 59.247 43.478 5.25 0.00 0.00 3.18
4043 5485 3.710209 AGTAGCTGGCTGATTTCAACT 57.290 42.857 5.25 0.00 0.00 3.16
4044 5486 3.341823 AGTAGCTGGCTGATTTCAACTG 58.658 45.455 5.25 0.00 0.00 3.16
4045 5487 1.542492 AGCTGGCTGATTTCAACTGG 58.458 50.000 0.00 0.00 0.00 4.00
4046 5488 1.202976 AGCTGGCTGATTTCAACTGGT 60.203 47.619 0.00 0.00 0.00 4.00
4047 5489 1.615392 GCTGGCTGATTTCAACTGGTT 59.385 47.619 0.00 0.00 0.00 3.67
4048 5490 2.352127 GCTGGCTGATTTCAACTGGTTC 60.352 50.000 0.00 0.00 0.00 3.62
4049 5491 2.229784 CTGGCTGATTTCAACTGGTTCC 59.770 50.000 0.00 0.00 0.00 3.62
4050 5492 1.200020 GGCTGATTTCAACTGGTTCCG 59.800 52.381 0.00 0.00 0.00 4.30
4051 5493 1.880027 GCTGATTTCAACTGGTTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
4052 5494 3.071479 GCTGATTTCAACTGGTTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
4053 5495 3.120304 GCTGATTTCAACTGGTTCCGTAC 60.120 47.826 0.00 0.00 0.00 3.67
4054 5496 4.062293 CTGATTTCAACTGGTTCCGTACA 58.938 43.478 0.00 0.00 0.00 2.90
4055 5497 4.647611 TGATTTCAACTGGTTCCGTACAT 58.352 39.130 0.00 0.00 0.00 2.29
4056 5498 4.693566 TGATTTCAACTGGTTCCGTACATC 59.306 41.667 0.00 0.00 0.00 3.06
4057 5499 3.755112 TTCAACTGGTTCCGTACATCA 57.245 42.857 0.00 0.00 0.00 3.07
4058 5500 3.755112 TCAACTGGTTCCGTACATCAA 57.245 42.857 0.00 0.00 0.00 2.57
4059 5501 3.395639 TCAACTGGTTCCGTACATCAAC 58.604 45.455 0.00 0.00 0.00 3.18
4060 5502 3.135225 CAACTGGTTCCGTACATCAACA 58.865 45.455 0.00 0.00 0.00 3.33
4061 5503 3.040147 ACTGGTTCCGTACATCAACAG 57.960 47.619 0.00 0.00 0.00 3.16
4062 5504 2.367567 ACTGGTTCCGTACATCAACAGT 59.632 45.455 0.99 0.99 0.00 3.55
4063 5505 3.575256 ACTGGTTCCGTACATCAACAGTA 59.425 43.478 4.45 0.00 0.00 2.74
4064 5506 4.039488 ACTGGTTCCGTACATCAACAGTAA 59.961 41.667 4.45 0.00 0.00 2.24
4065 5507 4.309099 TGGTTCCGTACATCAACAGTAAC 58.691 43.478 0.00 0.00 0.00 2.50
4066 5508 4.202233 TGGTTCCGTACATCAACAGTAACA 60.202 41.667 0.00 0.00 0.00 2.41
4067 5509 4.933400 GGTTCCGTACATCAACAGTAACAT 59.067 41.667 0.00 0.00 0.00 2.71
4068 5510 5.410439 GGTTCCGTACATCAACAGTAACATT 59.590 40.000 0.00 0.00 0.00 2.71
4069 5511 6.072893 GGTTCCGTACATCAACAGTAACATTT 60.073 38.462 0.00 0.00 0.00 2.32
4070 5512 6.715344 TCCGTACATCAACAGTAACATTTC 57.285 37.500 0.00 0.00 0.00 2.17
4071 5513 6.460781 TCCGTACATCAACAGTAACATTTCT 58.539 36.000 0.00 0.00 0.00 2.52
4072 5514 6.932400 TCCGTACATCAACAGTAACATTTCTT 59.068 34.615 0.00 0.00 0.00 2.52
4073 5515 7.015289 CCGTACATCAACAGTAACATTTCTTG 58.985 38.462 0.00 0.00 0.00 3.02
4074 5516 6.519761 CGTACATCAACAGTAACATTTCTTGC 59.480 38.462 0.00 0.00 0.00 4.01
4075 5517 6.389830 ACATCAACAGTAACATTTCTTGCA 57.610 33.333 0.00 0.00 0.00 4.08
4076 5518 6.804677 ACATCAACAGTAACATTTCTTGCAA 58.195 32.000 0.00 0.00 0.00 4.08
4077 5519 7.264221 ACATCAACAGTAACATTTCTTGCAAA 58.736 30.769 0.00 0.00 0.00 3.68
4078 5520 7.222611 ACATCAACAGTAACATTTCTTGCAAAC 59.777 33.333 0.00 0.00 0.00 2.93
4079 5521 6.625362 TCAACAGTAACATTTCTTGCAAACA 58.375 32.000 0.00 0.00 0.00 2.83
4080 5522 7.264221 TCAACAGTAACATTTCTTGCAAACAT 58.736 30.769 0.00 0.00 0.00 2.71
4081 5523 8.409371 TCAACAGTAACATTTCTTGCAAACATA 58.591 29.630 0.00 0.00 0.00 2.29
4082 5524 8.693504 CAACAGTAACATTTCTTGCAAACATAG 58.306 33.333 0.00 0.00 0.00 2.23
4083 5525 6.863126 ACAGTAACATTTCTTGCAAACATAGC 59.137 34.615 0.00 0.00 0.00 2.97
4084 5526 6.862608 CAGTAACATTTCTTGCAAACATAGCA 59.137 34.615 0.00 0.00 40.85 3.49
4095 5537 5.545588 TGCAAACATAGCAAAATAAAGCCA 58.454 33.333 0.00 0.00 39.39 4.75
4096 5538 5.407995 TGCAAACATAGCAAAATAAAGCCAC 59.592 36.000 0.00 0.00 39.39 5.01
4097 5539 5.407995 GCAAACATAGCAAAATAAAGCCACA 59.592 36.000 0.00 0.00 0.00 4.17
4098 5540 6.401367 GCAAACATAGCAAAATAAAGCCACAG 60.401 38.462 0.00 0.00 0.00 3.66
4099 5541 6.588719 AACATAGCAAAATAAAGCCACAGA 57.411 33.333 0.00 0.00 0.00 3.41
4100 5542 6.588719 ACATAGCAAAATAAAGCCACAGAA 57.411 33.333 0.00 0.00 0.00 3.02
4101 5543 6.389906 ACATAGCAAAATAAAGCCACAGAAC 58.610 36.000 0.00 0.00 0.00 3.01
4102 5544 6.209391 ACATAGCAAAATAAAGCCACAGAACT 59.791 34.615 0.00 0.00 0.00 3.01
4103 5545 7.393234 ACATAGCAAAATAAAGCCACAGAACTA 59.607 33.333 0.00 0.00 0.00 2.24
4104 5546 6.840780 AGCAAAATAAAGCCACAGAACTAT 57.159 33.333 0.00 0.00 0.00 2.12
4105 5547 6.856895 AGCAAAATAAAGCCACAGAACTATC 58.143 36.000 0.00 0.00 0.00 2.08
4106 5548 6.434028 AGCAAAATAAAGCCACAGAACTATCA 59.566 34.615 0.00 0.00 0.00 2.15
4107 5549 7.039784 AGCAAAATAAAGCCACAGAACTATCAA 60.040 33.333 0.00 0.00 0.00 2.57
4108 5550 7.274250 GCAAAATAAAGCCACAGAACTATCAAG 59.726 37.037 0.00 0.00 0.00 3.02
4109 5551 8.299570 CAAAATAAAGCCACAGAACTATCAAGT 58.700 33.333 0.00 0.00 37.65 3.16
4110 5552 9.515226 AAAATAAAGCCACAGAACTATCAAGTA 57.485 29.630 0.00 0.00 33.75 2.24
4111 5553 8.723942 AATAAAGCCACAGAACTATCAAGTAG 57.276 34.615 0.00 0.00 33.75 2.57
4112 5554 6.360370 AAAGCCACAGAACTATCAAGTAGA 57.640 37.500 0.00 0.00 33.75 2.59
4113 5555 5.331876 AGCCACAGAACTATCAAGTAGAC 57.668 43.478 0.00 0.00 33.75 2.59
4114 5556 5.020132 AGCCACAGAACTATCAAGTAGACT 58.980 41.667 0.00 0.00 33.75 3.24
4115 5557 6.188407 AGCCACAGAACTATCAAGTAGACTA 58.812 40.000 0.00 0.00 33.75 2.59
4116 5558 6.095720 AGCCACAGAACTATCAAGTAGACTAC 59.904 42.308 4.32 4.32 33.75 2.73
4117 5559 6.095720 GCCACAGAACTATCAAGTAGACTACT 59.904 42.308 9.45 9.45 41.73 2.57
4119 5561 8.524487 CCACAGAACTATCAAGTAGACTACTTT 58.476 37.037 22.62 13.46 46.27 2.66
4120 5562 9.562583 CACAGAACTATCAAGTAGACTACTTTC 57.437 37.037 22.62 16.62 46.27 2.62
4121 5563 9.298250 ACAGAACTATCAAGTAGACTACTTTCA 57.702 33.333 22.62 13.90 46.27 2.69
4129 5571 8.589335 TCAAGTAGACTACTTTCATCAAACAC 57.411 34.615 22.62 0.00 46.27 3.32
4130 5572 8.421784 TCAAGTAGACTACTTTCATCAAACACT 58.578 33.333 22.62 0.00 46.27 3.55
4131 5573 9.046296 CAAGTAGACTACTTTCATCAAACACTT 57.954 33.333 22.62 0.00 46.27 3.16
4132 5574 9.614792 AAGTAGACTACTTTCATCAAACACTTT 57.385 29.630 20.07 0.00 46.27 2.66
4136 5578 9.614792 AGACTACTTTCATCAAACACTTTAACT 57.385 29.630 0.00 0.00 0.00 2.24
4145 5587 9.554395 TCATCAAACACTTTAACTATCAAGTCA 57.446 29.630 0.00 0.00 33.75 3.41
4146 5588 9.599322 CATCAAACACTTTAACTATCAAGTCAC 57.401 33.333 0.00 0.00 33.75 3.67
4147 5589 8.725405 TCAAACACTTTAACTATCAAGTCACA 57.275 30.769 0.00 0.00 33.75 3.58
4148 5590 9.337396 TCAAACACTTTAACTATCAAGTCACAT 57.663 29.630 0.00 0.00 33.75 3.21
4151 5593 9.772973 AACACTTTAACTATCAAGTCACATACA 57.227 29.630 0.00 0.00 33.75 2.29
4152 5594 9.944376 ACACTTTAACTATCAAGTCACATACAT 57.056 29.630 0.00 0.00 33.75 2.29
4159 5601 8.654230 ACTATCAAGTCACATACATAGCTTTG 57.346 34.615 2.27 2.27 0.00 2.77
4160 5602 5.801350 TCAAGTCACATACATAGCTTTGC 57.199 39.130 3.86 0.00 0.00 3.68
4161 5603 5.491070 TCAAGTCACATACATAGCTTTGCT 58.509 37.500 3.86 0.00 43.41 3.91
4162 5604 6.639563 TCAAGTCACATACATAGCTTTGCTA 58.360 36.000 3.86 1.60 45.55 3.49
4178 5620 8.839310 AGCTTTGCTATCACTAGTAATAATGG 57.161 34.615 0.00 0.00 36.99 3.16
4179 5621 8.651389 AGCTTTGCTATCACTAGTAATAATGGA 58.349 33.333 0.00 0.00 36.99 3.41
4180 5622 9.273016 GCTTTGCTATCACTAGTAATAATGGAA 57.727 33.333 0.00 0.00 30.89 3.53
4215 5657 8.770010 ATAGTAGAAATGTGTCTAGGCTTAGT 57.230 34.615 2.43 0.00 30.70 2.24
4216 5658 9.863650 ATAGTAGAAATGTGTCTAGGCTTAGTA 57.136 33.333 2.43 0.00 30.70 1.82
4217 5659 8.228035 AGTAGAAATGTGTCTAGGCTTAGTAG 57.772 38.462 2.43 0.00 30.70 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 45 5.808030 TGAACGAATATTGTCTGATGCGTTA 59.192 36.000 0.00 0.00 40.27 3.18
50 59 7.552459 TCCAAGTATGAACGAATATTGTCTGA 58.448 34.615 0.00 0.00 0.00 3.27
91 100 9.571810 TGATTCGGTTAAATGAAAATCAATCAG 57.428 29.630 0.00 0.00 32.02 2.90
127 138 9.706691 CTGGTCTAGTTGAAACAAGTCTAAATA 57.293 33.333 0.00 0.00 0.00 1.40
138 149 6.645827 GGTTTAGAGTCTGGTCTAGTTGAAAC 59.354 42.308 1.86 1.36 30.62 2.78
190 201 1.666580 GCCAGCCGGAGATAGGTAC 59.333 63.158 5.05 0.00 0.00 3.34
234 245 1.506493 CTCATAGCCGTGAAGGATGC 58.494 55.000 0.00 0.00 45.00 3.91
236 247 1.123077 TGCTCATAGCCGTGAAGGAT 58.877 50.000 0.00 0.00 45.00 3.24
241 252 1.363807 CCGATGCTCATAGCCGTGA 59.636 57.895 0.00 0.00 41.51 4.35
243 254 1.399744 TTCCCGATGCTCATAGCCGT 61.400 55.000 0.00 0.00 41.51 5.68
244 255 0.668706 CTTCCCGATGCTCATAGCCG 60.669 60.000 0.00 0.00 41.51 5.52
248 259 3.197766 AGTTTCACTTCCCGATGCTCATA 59.802 43.478 0.00 0.00 0.00 2.15
253 264 2.872858 GGATAGTTTCACTTCCCGATGC 59.127 50.000 0.00 0.00 0.00 3.91
260 271 2.093658 TGGAGGCGGATAGTTTCACTTC 60.094 50.000 0.00 0.00 0.00 3.01
296 318 4.357947 GTCGTCAGCTCGGCCACA 62.358 66.667 2.24 0.00 0.00 4.17
314 336 2.564947 ACAAGAGAAGGCTGAAGACGAT 59.435 45.455 0.00 0.00 0.00 3.73
324 346 0.957888 GGTGCTCCACAAGAGAAGGC 60.958 60.000 0.00 0.00 46.50 4.35
326 348 1.345741 TGAGGTGCTCCACAAGAGAAG 59.654 52.381 7.70 0.00 46.50 2.85
328 350 1.552337 GATGAGGTGCTCCACAAGAGA 59.448 52.381 9.01 0.00 46.50 3.10
335 358 2.659063 CCGTGGATGAGGTGCTCCA 61.659 63.158 7.70 0.00 39.23 3.86
354 377 0.733729 CTACAGGGAGTTCGACGAGG 59.266 60.000 0.00 0.00 0.00 4.63
360 383 2.494918 CCGCCTACAGGGAGTTCG 59.505 66.667 0.00 0.00 37.23 3.95
368 391 1.202428 GGAGTTAGAAGCCGCCTACAG 60.202 57.143 0.00 0.00 0.00 2.74
391 414 2.666862 CGGTACAGCCAACGCCAA 60.667 61.111 0.00 0.00 36.97 4.52
414 437 2.125832 GGGAAATCCGTCGCGACA 60.126 61.111 35.71 20.28 36.71 4.35
435 458 2.163509 TGCTAGAGTCATATCGCTCCC 58.836 52.381 0.00 0.00 32.47 4.30
445 468 1.446792 GCGCTGCTTGCTAGAGTCA 60.447 57.895 0.00 0.00 40.11 3.41
482 505 2.504244 CTCCTCGCGTTGGACGTC 60.504 66.667 16.90 7.13 44.73 4.34
524 643 0.586319 GCGTGTTCTAGCAAGTGCAA 59.414 50.000 6.00 0.00 45.16 4.08
528 647 0.666577 GACGGCGTGTTCTAGCAAGT 60.667 55.000 21.19 0.00 34.54 3.16
530 649 1.373748 GGACGGCGTGTTCTAGCAA 60.374 57.895 21.19 0.00 34.54 3.91
559 678 2.283298 CTCACTACATGGACATGGTGC 58.717 52.381 15.94 0.00 42.91 5.01
589 708 0.826715 AGTCGTCATCCTCATGGGTG 59.173 55.000 0.00 0.00 45.72 4.61
590 709 0.826715 CAGTCGTCATCCTCATGGGT 59.173 55.000 0.00 0.00 36.25 4.51
592 711 1.478105 TGTCAGTCGTCATCCTCATGG 59.522 52.381 0.00 0.00 0.00 3.66
597 716 2.350522 GCAAATGTCAGTCGTCATCCT 58.649 47.619 0.00 0.00 0.00 3.24
598 717 1.398390 GGCAAATGTCAGTCGTCATCC 59.602 52.381 0.00 0.00 0.00 3.51
605 724 2.325082 ACGCCGGCAAATGTCAGTC 61.325 57.895 28.98 0.00 0.00 3.51
606 725 2.281484 ACGCCGGCAAATGTCAGT 60.281 55.556 28.98 10.68 0.00 3.41
607 726 2.176546 CACGCCGGCAAATGTCAG 59.823 61.111 28.98 9.93 0.00 3.51
608 727 3.361158 CCACGCCGGCAAATGTCA 61.361 61.111 28.98 0.00 0.00 3.58
635 754 0.827925 CCTATGGTAGAGGCGGCTGA 60.828 60.000 19.63 0.00 0.00 4.26
637 756 4.199804 CCTATGGTAGAGGCGGCT 57.800 61.111 13.09 13.09 0.00 5.52
642 761 1.273606 CGGACATGCCTATGGTAGAGG 59.726 57.143 0.00 0.00 38.66 3.69
647 766 1.146930 CAGCGGACATGCCTATGGT 59.853 57.895 0.00 0.00 38.66 3.55
663 793 3.197790 CAATGGAGGTCGGCGCAG 61.198 66.667 10.83 5.07 0.00 5.18
664 794 3.664025 CTCAATGGAGGTCGGCGCA 62.664 63.158 10.83 0.00 37.51 6.09
678 808 2.094700 GTGTGTAGACGGATGAGCTCAA 60.095 50.000 22.50 4.23 0.00 3.02
686 816 0.445436 GACGACGTGTGTAGACGGAT 59.555 55.000 4.58 0.00 43.84 4.18
688 818 1.508539 CGACGACGTGTGTAGACGG 60.509 63.158 4.58 0.00 43.84 4.79
694 824 1.081641 GTCCATCGACGACGTGTGT 60.082 57.895 4.58 0.00 40.69 3.72
700 830 1.944676 GCATCGGTCCATCGACGAC 60.945 63.158 0.00 6.01 42.21 4.34
703 833 1.337071 TCTTAGCATCGGTCCATCGAC 59.663 52.381 0.00 0.00 42.21 4.20
705 835 1.603172 GGTCTTAGCATCGGTCCATCG 60.603 57.143 0.00 0.00 0.00 3.84
725 1374 1.675641 CCTGTTCGCCTCCAAAGGG 60.676 63.158 0.00 0.00 43.58 3.95
726 1375 0.537371 AACCTGTTCGCCTCCAAAGG 60.537 55.000 0.00 0.00 46.44 3.11
727 1376 1.001378 CAAACCTGTTCGCCTCCAAAG 60.001 52.381 0.00 0.00 0.00 2.77
730 1379 1.228124 CCAAACCTGTTCGCCTCCA 60.228 57.895 0.00 0.00 0.00 3.86
732 1381 1.971695 CCCCAAACCTGTTCGCCTC 60.972 63.158 0.00 0.00 0.00 4.70
733 1382 2.115266 CCCCAAACCTGTTCGCCT 59.885 61.111 0.00 0.00 0.00 5.52
735 1384 2.203437 ACCCCCAAACCTGTTCGC 60.203 61.111 0.00 0.00 0.00 4.70
737 1386 1.602605 CCGACCCCCAAACCTGTTC 60.603 63.158 0.00 0.00 0.00 3.18
739 1388 2.775219 ACCGACCCCCAAACCTGT 60.775 61.111 0.00 0.00 0.00 4.00
740 1389 2.282180 CACCGACCCCCAAACCTG 60.282 66.667 0.00 0.00 0.00 4.00
741 1390 2.388610 AACACCGACCCCCAAACCT 61.389 57.895 0.00 0.00 0.00 3.50
748 1426 1.078426 CATCTCCAACACCGACCCC 60.078 63.158 0.00 0.00 0.00 4.95
756 1434 4.098914 AGTTACAAAGGCATCTCCAACA 57.901 40.909 0.00 0.00 37.29 3.33
769 1447 6.105397 ACTCCTATCCGACAAAGTTACAAA 57.895 37.500 0.00 0.00 0.00 2.83
774 1452 5.997384 AACTACTCCTATCCGACAAAGTT 57.003 39.130 0.00 0.00 0.00 2.66
812 1490 3.684103 GTGGACATCACACACGAAAAA 57.316 42.857 0.00 0.00 45.39 1.94
825 1513 4.019771 GGAAAAAGAGAGAGAGGTGGACAT 60.020 45.833 0.00 0.00 0.00 3.06
846 1547 0.845102 GTGAAGGGAAGGGAAGGGGA 60.845 60.000 0.00 0.00 0.00 4.81
850 1551 1.377333 GCGGTGAAGGGAAGGGAAG 60.377 63.158 0.00 0.00 0.00 3.46
852 1553 2.528127 TGCGGTGAAGGGAAGGGA 60.528 61.111 0.00 0.00 0.00 4.20
853 1554 2.359975 GTGCGGTGAAGGGAAGGG 60.360 66.667 0.00 0.00 0.00 3.95
873 1574 1.593196 GGGGGTTTGCTTTGCTTTTC 58.407 50.000 0.00 0.00 0.00 2.29
874 1575 3.798794 GGGGGTTTGCTTTGCTTTT 57.201 47.368 0.00 0.00 0.00 2.27
891 1592 1.199615 GGGAGACAAGAAGAGAGGGG 58.800 60.000 0.00 0.00 0.00 4.79
904 1605 2.726822 AAACAAGTCGGCGGGGAGAC 62.727 60.000 7.21 0.00 37.63 3.36
936 1640 1.994507 ATCGGATCGGATCGGATCGC 61.995 60.000 26.28 21.11 43.26 4.58
937 1641 2.099143 ATCGGATCGGATCGGATCG 58.901 57.895 26.28 23.09 43.26 3.69
991 1700 2.527951 GAAGAGTCCATGGCTGCGGT 62.528 60.000 6.96 0.00 0.00 5.68
992 1701 1.817099 GAAGAGTCCATGGCTGCGG 60.817 63.158 6.96 0.00 0.00 5.69
993 1702 0.392193 AAGAAGAGTCCATGGCTGCG 60.392 55.000 6.96 0.00 0.00 5.18
994 1703 1.377536 GAAGAAGAGTCCATGGCTGC 58.622 55.000 6.96 0.00 0.00 5.25
1047 1763 3.060895 GCTTGAACAGGTAATCGAAGTCG 59.939 47.826 0.00 0.00 41.45 4.18
1125 1841 1.378124 GGTCCTCGAAGGAGTCGGAG 61.378 65.000 4.13 0.00 46.90 4.63
1146 1862 1.143183 CGTACCGATGGTTGGGGAG 59.857 63.158 0.00 0.00 37.09 4.30
1189 1908 4.139162 TGGATTTGATGGGGGAAAGAAA 57.861 40.909 0.00 0.00 0.00 2.52
1193 1912 3.246277 TGGATTGGATTTGATGGGGGAAA 60.246 43.478 0.00 0.00 0.00 3.13
1209 1967 5.617528 TTGGATTGGATTGGATTGGATTG 57.382 39.130 0.00 0.00 0.00 2.67
1214 1972 5.818857 GGTTTGATTGGATTGGATTGGATTG 59.181 40.000 0.00 0.00 0.00 2.67
1287 2049 1.617850 TCCACGCCTGCAATTTCATTT 59.382 42.857 0.00 0.00 0.00 2.32
1289 2051 0.527565 GTCCACGCCTGCAATTTCAT 59.472 50.000 0.00 0.00 0.00 2.57
1290 2052 0.537143 AGTCCACGCCTGCAATTTCA 60.537 50.000 0.00 0.00 0.00 2.69
1291 2053 0.598065 AAGTCCACGCCTGCAATTTC 59.402 50.000 0.00 0.00 0.00 2.17
1292 2054 0.598065 GAAGTCCACGCCTGCAATTT 59.402 50.000 0.00 0.00 0.00 1.82
1374 2146 5.163205 CCAGTGGAGATGGGAATACAATACA 60.163 44.000 1.68 0.00 33.94 2.29
1375 2147 5.071788 TCCAGTGGAGATGGGAATACAATAC 59.928 44.000 8.12 0.00 38.44 1.89
1377 2149 4.047166 TCCAGTGGAGATGGGAATACAAT 58.953 43.478 8.12 0.00 38.44 2.71
1394 2166 8.375506 TCAATCAATGTAAGAAACTAGTCCAGT 58.624 33.333 0.00 0.00 40.05 4.00
1396 2168 8.999431 GTTCAATCAATGTAAGAAACTAGTCCA 58.001 33.333 0.00 0.00 0.00 4.02
1397 2169 8.451748 GGTTCAATCAATGTAAGAAACTAGTCC 58.548 37.037 0.00 0.00 0.00 3.85
1398 2170 8.169268 CGGTTCAATCAATGTAAGAAACTAGTC 58.831 37.037 0.00 0.00 0.00 2.59
1399 2171 7.660208 ACGGTTCAATCAATGTAAGAAACTAGT 59.340 33.333 0.00 0.00 0.00 2.57
1435 2431 1.264749 ACATGCGAGTGGGCCTAAGA 61.265 55.000 4.53 0.00 0.00 2.10
1472 2493 4.770010 AGAGAGTAGTGAGGTTGGAGAAAG 59.230 45.833 0.00 0.00 0.00 2.62
1482 2503 2.930950 AGCTAGCAGAGAGTAGTGAGG 58.069 52.381 18.83 0.00 0.00 3.86
1606 2640 9.823647 CTACTTTATTTAGATGACCATCACACT 57.176 33.333 12.01 0.59 40.22 3.55
1607 2641 9.817809 TCTACTTTATTTAGATGACCATCACAC 57.182 33.333 12.01 0.00 40.22 3.82
1625 2672 8.925338 GGGACTAATCTTCCTTGATCTACTTTA 58.075 37.037 0.00 0.00 33.17 1.85
1634 2681 3.454858 AGCAGGGACTAATCTTCCTTGA 58.545 45.455 4.78 0.00 41.68 3.02
1674 2721 4.334552 TGCCATGTGTTAGATGTGACATT 58.665 39.130 0.00 0.00 0.00 2.71
1694 2741 2.137523 CAGGCAGTCAAAACCAATTGC 58.862 47.619 0.00 0.00 0.00 3.56
1770 2817 5.254115 GGGAAATTCAGTAGGCACTTAAGT 58.746 41.667 1.12 1.12 41.75 2.24
1848 2896 4.038642 TGTGAACTGGGGCATTTAAGAAAC 59.961 41.667 0.00 0.00 0.00 2.78
1871 2930 7.574592 GCAGCTAAATCATCAGAACTCAAAAGT 60.575 37.037 0.00 0.00 37.32 2.66
1901 2972 1.233950 TGCACAACAGGCATACGGTG 61.234 55.000 0.00 0.00 36.11 4.94
1902 2973 0.955428 CTGCACAACAGGCATACGGT 60.955 55.000 0.00 0.00 43.19 4.83
2063 3172 7.291411 TGGTTGCAAAACTAGCCTATTAAAA 57.709 32.000 0.00 0.00 32.01 1.52
2064 3173 6.902771 TGGTTGCAAAACTAGCCTATTAAA 57.097 33.333 0.00 0.00 32.01 1.52
2065 3174 6.902771 TTGGTTGCAAAACTAGCCTATTAA 57.097 33.333 0.00 0.00 32.01 1.40
2066 3175 6.492087 AGTTTGGTTGCAAAACTAGCCTATTA 59.508 34.615 12.26 0.00 44.10 0.98
2246 3452 1.744320 AAAAGGCTTTGCGACCCCAC 61.744 55.000 14.19 0.00 0.00 4.61
2391 3614 3.718434 TGGCCCATATGTCAGAGAGATTT 59.282 43.478 0.00 0.00 0.00 2.17
2427 3650 4.345859 ACAGTCTTGGTTGGTCGAATAA 57.654 40.909 0.00 0.00 0.00 1.40
2733 3995 0.535780 CCTCAAAGCACTGCTCCACA 60.536 55.000 3.40 0.00 38.25 4.17
2960 4231 2.626266 TGTGAGAGTGTTCCACGTGTAT 59.374 45.455 15.65 0.00 39.64 2.29
3014 4289 8.077991 CAGAAAATTGATACTGAAACTGCTGAA 58.922 33.333 0.00 0.00 32.90 3.02
3015 4290 7.229306 ACAGAAAATTGATACTGAAACTGCTGA 59.771 33.333 0.00 0.00 34.88 4.26
3016 4291 7.365741 ACAGAAAATTGATACTGAAACTGCTG 58.634 34.615 0.00 0.00 34.88 4.41
3017 4292 7.516198 ACAGAAAATTGATACTGAAACTGCT 57.484 32.000 0.00 0.00 34.88 4.24
3018 4293 9.846248 AATACAGAAAATTGATACTGAAACTGC 57.154 29.630 0.00 0.00 34.88 4.40
3099 4374 4.139786 GTGTCCAATATCTGCACCATCAT 58.860 43.478 0.00 0.00 0.00 2.45
3100 4375 3.544684 GTGTCCAATATCTGCACCATCA 58.455 45.455 0.00 0.00 0.00 3.07
3222 4497 1.067212 CGGGATTAGCTAGCGTGAACT 59.933 52.381 9.55 0.00 0.00 3.01
3223 4498 1.488527 CGGGATTAGCTAGCGTGAAC 58.511 55.000 9.55 1.05 0.00 3.18
3285 4588 3.416156 GGCAGATATCATCAGTTTCCCC 58.584 50.000 5.32 0.00 0.00 4.81
3287 4590 3.733337 ACGGCAGATATCATCAGTTTCC 58.267 45.455 5.32 0.00 0.00 3.13
3292 4595 5.490139 AAAACAACGGCAGATATCATCAG 57.510 39.130 5.32 0.00 0.00 2.90
3304 4615 4.207429 TCAAAAGCGAAATAAAACAACGGC 59.793 37.500 0.00 0.00 0.00 5.68
3305 4616 5.457473 ACTCAAAAGCGAAATAAAACAACGG 59.543 36.000 0.00 0.00 0.00 4.44
3306 4617 6.490877 ACTCAAAAGCGAAATAAAACAACG 57.509 33.333 0.00 0.00 0.00 4.10
3307 4618 6.623353 GCAACTCAAAAGCGAAATAAAACAAC 59.377 34.615 0.00 0.00 0.00 3.32
3308 4619 6.533367 AGCAACTCAAAAGCGAAATAAAACAA 59.467 30.769 0.00 0.00 0.00 2.83
3309 4620 6.019961 CAGCAACTCAAAAGCGAAATAAAACA 60.020 34.615 0.00 0.00 0.00 2.83
3327 4655 6.882656 ACTGACTGATTCATATACAGCAACT 58.117 36.000 0.00 0.00 35.38 3.16
3382 4710 7.220108 GGTACTCTGTTTTGTTTTGTGATTCAC 59.780 37.037 9.93 9.93 34.56 3.18
3481 4830 6.553524 CACAAACCAAATTTCAGCACAAATT 58.446 32.000 0.00 0.89 37.53 1.82
3498 4847 5.292101 GTCTGTCTGTCTATATGCACAAACC 59.708 44.000 0.00 0.00 0.00 3.27
3587 5002 7.748683 GTGCACGAGTTCAAATTGATACAATTA 59.251 33.333 0.00 0.00 0.00 1.40
3592 5007 4.081761 CGTGCACGAGTTCAAATTGATAC 58.918 43.478 34.93 0.00 43.02 2.24
3622 5037 5.486526 TCTTGGAGCTCTCTTTCTGAATTC 58.513 41.667 14.64 0.00 0.00 2.17
3656 5071 6.405278 AGGAACAAAAAGTAATGTTGAGGG 57.595 37.500 0.00 0.00 39.73 4.30
3689 5104 4.142182 GCAACAGAGCTTGCCCATAAATAA 60.142 41.667 0.00 0.00 40.68 1.40
3692 5107 1.545582 GCAACAGAGCTTGCCCATAAA 59.454 47.619 0.00 0.00 40.68 1.40
3788 5216 4.141321 TGCAGGAATATTGAGAGCAATCCT 60.141 41.667 0.00 0.00 43.43 3.24
3789 5217 4.139786 TGCAGGAATATTGAGAGCAATCC 58.860 43.478 0.00 0.00 43.43 3.01
3790 5218 5.961396 ATGCAGGAATATTGAGAGCAATC 57.039 39.130 0.00 0.00 43.43 2.67
3791 5219 6.726490 AAATGCAGGAATATTGAGAGCAAT 57.274 33.333 0.00 0.00 46.11 3.56
3845 5287 2.204237 ACACGTCGGTTGGTTCTTAAC 58.796 47.619 0.00 0.00 0.00 2.01
3846 5288 2.472816 GACACGTCGGTTGGTTCTTAA 58.527 47.619 0.00 0.00 0.00 1.85
3847 5289 1.269726 GGACACGTCGGTTGGTTCTTA 60.270 52.381 0.00 0.00 0.00 2.10
3848 5290 0.531311 GGACACGTCGGTTGGTTCTT 60.531 55.000 0.00 0.00 0.00 2.52
3849 5291 1.068585 GGACACGTCGGTTGGTTCT 59.931 57.895 0.00 0.00 0.00 3.01
3850 5292 0.531311 AAGGACACGTCGGTTGGTTC 60.531 55.000 0.00 0.00 0.00 3.62
3851 5293 0.752054 TAAGGACACGTCGGTTGGTT 59.248 50.000 0.00 0.00 0.00 3.67
3852 5294 0.752054 TTAAGGACACGTCGGTTGGT 59.248 50.000 0.00 0.00 0.00 3.67
3853 5295 1.142474 GTTAAGGACACGTCGGTTGG 58.858 55.000 0.00 0.00 0.00 3.77
3854 5296 1.855513 TGTTAAGGACACGTCGGTTG 58.144 50.000 0.00 0.00 32.00 3.77
3855 5297 2.409975 CATGTTAAGGACACGTCGGTT 58.590 47.619 0.00 0.00 42.04 4.44
3856 5298 1.938016 GCATGTTAAGGACACGTCGGT 60.938 52.381 0.00 0.00 42.04 4.69
3857 5299 0.719465 GCATGTTAAGGACACGTCGG 59.281 55.000 0.00 0.00 42.04 4.79
3858 5300 0.719465 GGCATGTTAAGGACACGTCG 59.281 55.000 0.00 0.00 42.04 5.12
3859 5301 0.719465 CGGCATGTTAAGGACACGTC 59.281 55.000 0.00 0.00 42.04 4.34
3860 5302 0.319083 TCGGCATGTTAAGGACACGT 59.681 50.000 0.00 0.00 42.04 4.49
3861 5303 1.651987 ATCGGCATGTTAAGGACACG 58.348 50.000 0.00 0.00 42.04 4.49
3862 5304 2.030457 CGAATCGGCATGTTAAGGACAC 59.970 50.000 0.00 0.00 42.04 3.67
3863 5305 2.276201 CGAATCGGCATGTTAAGGACA 58.724 47.619 0.00 0.00 43.71 4.02
3864 5306 1.003866 GCGAATCGGCATGTTAAGGAC 60.004 52.381 4.35 0.00 0.00 3.85
3865 5307 1.295792 GCGAATCGGCATGTTAAGGA 58.704 50.000 4.35 0.00 0.00 3.36
3866 5308 3.825812 GCGAATCGGCATGTTAAGG 57.174 52.632 4.35 0.00 0.00 2.69
3883 5325 4.250464 GTTAATTTGGTTTAAGCAGGGGC 58.750 43.478 0.00 0.00 41.61 5.80
3884 5326 4.284746 TGGTTAATTTGGTTTAAGCAGGGG 59.715 41.667 0.00 0.00 41.86 4.79
3885 5327 5.476091 TGGTTAATTTGGTTTAAGCAGGG 57.524 39.130 0.00 0.00 41.86 4.45
3886 5328 6.284459 TGTTGGTTAATTTGGTTTAAGCAGG 58.716 36.000 8.32 0.00 45.19 4.85
3887 5329 7.778470 TTGTTGGTTAATTTGGTTTAAGCAG 57.222 32.000 8.32 0.00 45.19 4.24
3888 5330 8.738645 AATTGTTGGTTAATTTGGTTTAAGCA 57.261 26.923 5.10 5.10 43.81 3.91
3889 5331 9.444534 CAAATTGTTGGTTAATTTGGTTTAAGC 57.555 29.630 12.83 0.00 45.19 3.09
3898 5340 8.462589 AAGAATGGCAAATTGTTGGTTAATTT 57.537 26.923 0.00 0.00 38.02 1.82
3899 5341 8.351461 CAAAGAATGGCAAATTGTTGGTTAATT 58.649 29.630 0.00 0.00 35.10 1.40
3900 5342 7.718753 TCAAAGAATGGCAAATTGTTGGTTAAT 59.281 29.630 0.00 0.00 35.10 1.40
3901 5343 7.011857 GTCAAAGAATGGCAAATTGTTGGTTAA 59.988 33.333 0.00 0.00 35.10 2.01
3902 5344 6.481644 GTCAAAGAATGGCAAATTGTTGGTTA 59.518 34.615 0.00 0.00 35.10 2.85
3903 5345 5.296531 GTCAAAGAATGGCAAATTGTTGGTT 59.703 36.000 0.00 0.00 35.10 3.67
3904 5346 4.815846 GTCAAAGAATGGCAAATTGTTGGT 59.184 37.500 0.00 0.00 35.10 3.67
3905 5347 4.815308 TGTCAAAGAATGGCAAATTGTTGG 59.185 37.500 0.00 0.00 41.69 3.77
3906 5348 5.987777 TGTCAAAGAATGGCAAATTGTTG 57.012 34.783 0.00 0.00 41.69 3.33
3914 5356 5.178096 TCCTATCTTGTCAAAGAATGGCA 57.822 39.130 0.00 0.00 45.44 4.92
3915 5357 6.515272 TTTCCTATCTTGTCAAAGAATGGC 57.485 37.500 0.00 0.00 45.44 4.40
3916 5358 8.025445 CAGTTTTCCTATCTTGTCAAAGAATGG 58.975 37.037 0.00 0.00 45.44 3.16
3917 5359 8.786898 TCAGTTTTCCTATCTTGTCAAAGAATG 58.213 33.333 0.00 0.00 45.44 2.67
3918 5360 8.924511 TCAGTTTTCCTATCTTGTCAAAGAAT 57.075 30.769 0.00 0.00 45.44 2.40
3919 5361 8.924511 ATCAGTTTTCCTATCTTGTCAAAGAA 57.075 30.769 0.00 0.00 45.44 2.52
3920 5362 9.436957 GTATCAGTTTTCCTATCTTGTCAAAGA 57.563 33.333 0.00 0.00 46.33 2.52
3921 5363 9.219603 TGTATCAGTTTTCCTATCTTGTCAAAG 57.780 33.333 0.00 0.00 34.45 2.77
3922 5364 9.219603 CTGTATCAGTTTTCCTATCTTGTCAAA 57.780 33.333 0.00 0.00 0.00 2.69
3923 5365 8.593679 TCTGTATCAGTTTTCCTATCTTGTCAA 58.406 33.333 0.00 0.00 32.61 3.18
3924 5366 8.134202 TCTGTATCAGTTTTCCTATCTTGTCA 57.866 34.615 0.00 0.00 32.61 3.58
3925 5367 9.255304 GATCTGTATCAGTTTTCCTATCTTGTC 57.745 37.037 0.00 0.00 32.61 3.18
3926 5368 8.762645 TGATCTGTATCAGTTTTCCTATCTTGT 58.237 33.333 0.00 0.00 37.20 3.16
3941 5383 7.148356 GCAGATTTGACAAACTGATCTGTATCA 60.148 37.037 23.26 7.70 43.40 2.15
3942 5384 7.185453 GCAGATTTGACAAACTGATCTGTATC 58.815 38.462 23.26 3.89 43.40 2.24
3943 5385 6.094603 GGCAGATTTGACAAACTGATCTGTAT 59.905 38.462 23.26 0.00 43.40 2.29
3944 5386 5.412594 GGCAGATTTGACAAACTGATCTGTA 59.587 40.000 23.26 0.00 43.40 2.74
3945 5387 4.217118 GGCAGATTTGACAAACTGATCTGT 59.783 41.667 23.26 0.00 43.40 3.41
3946 5388 4.216902 TGGCAGATTTGACAAACTGATCTG 59.783 41.667 23.26 21.08 40.10 2.90
3947 5389 4.217118 GTGGCAGATTTGACAAACTGATCT 59.783 41.667 23.26 12.76 45.95 2.75
3948 5390 4.479619 GTGGCAGATTTGACAAACTGATC 58.520 43.478 23.26 17.19 45.95 2.92
3949 5391 3.256631 GGTGGCAGATTTGACAAACTGAT 59.743 43.478 23.26 3.75 45.95 2.90
3950 5392 2.622942 GGTGGCAGATTTGACAAACTGA 59.377 45.455 23.26 9.52 45.95 3.41
3951 5393 2.361757 TGGTGGCAGATTTGACAAACTG 59.638 45.455 18.42 18.42 45.95 3.16
3952 5394 2.665165 TGGTGGCAGATTTGACAAACT 58.335 42.857 1.94 0.30 45.95 2.66
3953 5395 3.451141 TTGGTGGCAGATTTGACAAAC 57.549 42.857 1.94 0.00 45.95 2.93
3954 5396 3.181467 CCTTTGGTGGCAGATTTGACAAA 60.181 43.478 2.48 2.48 45.95 2.83
3955 5397 2.364970 CCTTTGGTGGCAGATTTGACAA 59.635 45.455 0.00 0.00 45.95 3.18
3956 5398 1.962807 CCTTTGGTGGCAGATTTGACA 59.037 47.619 0.00 0.00 41.02 3.58
3957 5399 2.730550 CCTTTGGTGGCAGATTTGAC 57.269 50.000 0.00 0.00 0.00 3.18
3967 5409 2.459555 AATAGGATGGCCTTTGGTGG 57.540 50.000 3.32 0.00 43.90 4.61
3968 5410 4.437682 TCTAATAGGATGGCCTTTGGTG 57.562 45.455 3.32 0.00 43.90 4.17
3969 5411 5.669798 AATCTAATAGGATGGCCTTTGGT 57.330 39.130 3.32 0.00 43.90 3.67
3970 5412 6.434340 GGTAAATCTAATAGGATGGCCTTTGG 59.566 42.308 3.32 0.00 43.90 3.28
3971 5413 7.175641 CAGGTAAATCTAATAGGATGGCCTTTG 59.824 40.741 3.32 0.00 43.90 2.77
3972 5414 7.073725 TCAGGTAAATCTAATAGGATGGCCTTT 59.926 37.037 3.32 0.00 43.90 3.11
3973 5415 6.562608 TCAGGTAAATCTAATAGGATGGCCTT 59.437 38.462 3.32 0.00 43.90 4.35
3975 5417 6.374417 TCAGGTAAATCTAATAGGATGGCC 57.626 41.667 0.00 0.00 0.00 5.36
3976 5418 7.624549 TGATCAGGTAAATCTAATAGGATGGC 58.375 38.462 0.00 0.00 0.00 4.40
3977 5419 9.610705 CATGATCAGGTAAATCTAATAGGATGG 57.389 37.037 0.09 0.00 0.00 3.51
3978 5420 9.107177 GCATGATCAGGTAAATCTAATAGGATG 57.893 37.037 9.42 0.00 0.00 3.51
3979 5421 8.829746 TGCATGATCAGGTAAATCTAATAGGAT 58.170 33.333 9.42 0.00 0.00 3.24
3980 5422 8.206126 TGCATGATCAGGTAAATCTAATAGGA 57.794 34.615 9.42 0.00 0.00 2.94
3981 5423 8.890718 CATGCATGATCAGGTAAATCTAATAGG 58.109 37.037 22.59 0.00 0.00 2.57
3982 5424 9.445878 ACATGCATGATCAGGTAAATCTAATAG 57.554 33.333 32.75 0.00 0.00 1.73
3984 5426 9.224267 GTACATGCATGATCAGGTAAATCTAAT 57.776 33.333 32.75 6.71 35.40 1.73
3985 5427 8.210265 TGTACATGCATGATCAGGTAAATCTAA 58.790 33.333 32.75 2.62 35.40 2.10
3986 5428 7.734942 TGTACATGCATGATCAGGTAAATCTA 58.265 34.615 32.75 7.18 35.40 1.98
3987 5429 6.594744 TGTACATGCATGATCAGGTAAATCT 58.405 36.000 32.75 8.20 35.40 2.40
3988 5430 6.866010 TGTACATGCATGATCAGGTAAATC 57.134 37.500 32.75 3.25 35.40 2.17
3989 5431 7.643569 TTTGTACATGCATGATCAGGTAAAT 57.356 32.000 32.75 8.94 35.40 1.40
3990 5432 7.312154 GTTTTGTACATGCATGATCAGGTAAA 58.688 34.615 32.75 20.76 35.40 2.01
3991 5433 6.127758 GGTTTTGTACATGCATGATCAGGTAA 60.128 38.462 32.75 17.02 35.40 2.85
3992 5434 5.356751 GGTTTTGTACATGCATGATCAGGTA 59.643 40.000 32.75 10.88 32.81 3.08
3993 5435 4.158394 GGTTTTGTACATGCATGATCAGGT 59.842 41.667 32.75 11.95 35.06 4.00
3994 5436 4.158209 TGGTTTTGTACATGCATGATCAGG 59.842 41.667 32.75 2.22 0.00 3.86
3995 5437 5.106038 ACTGGTTTTGTACATGCATGATCAG 60.106 40.000 32.75 24.16 0.00 2.90
3996 5438 4.766373 ACTGGTTTTGTACATGCATGATCA 59.234 37.500 32.75 24.53 0.00 2.92
3997 5439 5.314923 ACTGGTTTTGTACATGCATGATC 57.685 39.130 32.75 22.46 0.00 2.92
3998 5440 5.243507 TCAACTGGTTTTGTACATGCATGAT 59.756 36.000 32.75 18.51 0.00 2.45
3999 5441 4.582240 TCAACTGGTTTTGTACATGCATGA 59.418 37.500 32.75 13.72 0.00 3.07
4000 5442 4.869215 TCAACTGGTTTTGTACATGCATG 58.131 39.130 25.09 25.09 0.00 4.06
4001 5443 5.068987 ACTTCAACTGGTTTTGTACATGCAT 59.931 36.000 0.00 0.00 0.00 3.96
4002 5444 4.400884 ACTTCAACTGGTTTTGTACATGCA 59.599 37.500 0.00 0.00 0.00 3.96
4003 5445 4.932146 ACTTCAACTGGTTTTGTACATGC 58.068 39.130 0.00 0.00 0.00 4.06
4004 5446 6.017109 AGCTACTTCAACTGGTTTTGTACATG 60.017 38.462 0.00 0.00 0.00 3.21
4005 5447 6.017109 CAGCTACTTCAACTGGTTTTGTACAT 60.017 38.462 0.00 0.00 0.00 2.29
4006 5448 5.295787 CAGCTACTTCAACTGGTTTTGTACA 59.704 40.000 0.00 0.00 0.00 2.90
4007 5449 5.277828 CCAGCTACTTCAACTGGTTTTGTAC 60.278 44.000 0.00 0.00 44.91 2.90
4008 5450 4.819630 CCAGCTACTTCAACTGGTTTTGTA 59.180 41.667 0.00 0.00 44.91 2.41
4009 5451 3.632145 CCAGCTACTTCAACTGGTTTTGT 59.368 43.478 0.00 0.00 44.91 2.83
4010 5452 4.228912 CCAGCTACTTCAACTGGTTTTG 57.771 45.455 0.00 0.00 44.91 2.44
4016 5458 2.462456 TCAGCCAGCTACTTCAACTG 57.538 50.000 0.00 0.00 0.00 3.16
4017 5459 3.710209 AATCAGCCAGCTACTTCAACT 57.290 42.857 0.00 0.00 0.00 3.16
4018 5460 3.753272 TGAAATCAGCCAGCTACTTCAAC 59.247 43.478 7.42 0.00 0.00 3.18
4019 5461 4.019792 TGAAATCAGCCAGCTACTTCAA 57.980 40.909 7.42 0.00 0.00 2.69
4020 5462 3.701205 TGAAATCAGCCAGCTACTTCA 57.299 42.857 0.00 0.00 0.00 3.02
4021 5463 4.006319 AGTTGAAATCAGCCAGCTACTTC 58.994 43.478 0.00 0.00 0.00 3.01
4022 5464 3.755378 CAGTTGAAATCAGCCAGCTACTT 59.245 43.478 0.00 0.00 0.00 2.24
4023 5465 3.341823 CAGTTGAAATCAGCCAGCTACT 58.658 45.455 0.00 0.00 0.00 2.57
4024 5466 2.421424 CCAGTTGAAATCAGCCAGCTAC 59.579 50.000 0.00 0.00 0.00 3.58
4025 5467 2.040278 ACCAGTTGAAATCAGCCAGCTA 59.960 45.455 0.00 0.00 0.00 3.32
4026 5468 1.202976 ACCAGTTGAAATCAGCCAGCT 60.203 47.619 0.00 0.00 0.00 4.24
4027 5469 1.251251 ACCAGTTGAAATCAGCCAGC 58.749 50.000 0.00 0.00 0.00 4.85
4028 5470 2.229784 GGAACCAGTTGAAATCAGCCAG 59.770 50.000 0.00 0.00 0.00 4.85
4029 5471 2.238521 GGAACCAGTTGAAATCAGCCA 58.761 47.619 0.00 0.00 0.00 4.75
4030 5472 1.200020 CGGAACCAGTTGAAATCAGCC 59.800 52.381 0.00 0.00 0.00 4.85
4031 5473 1.880027 ACGGAACCAGTTGAAATCAGC 59.120 47.619 0.00 0.00 0.00 4.26
4032 5474 4.062293 TGTACGGAACCAGTTGAAATCAG 58.938 43.478 0.00 0.00 0.00 2.90
4033 5475 4.074627 TGTACGGAACCAGTTGAAATCA 57.925 40.909 0.00 0.00 0.00 2.57
4034 5476 4.693566 TGATGTACGGAACCAGTTGAAATC 59.306 41.667 0.00 0.00 0.00 2.17
4035 5477 4.647611 TGATGTACGGAACCAGTTGAAAT 58.352 39.130 0.00 0.00 0.00 2.17
4036 5478 4.074627 TGATGTACGGAACCAGTTGAAA 57.925 40.909 0.00 0.00 0.00 2.69
4037 5479 3.755112 TGATGTACGGAACCAGTTGAA 57.245 42.857 0.00 0.00 0.00 2.69
4038 5480 3.181464 TGTTGATGTACGGAACCAGTTGA 60.181 43.478 0.00 0.00 0.00 3.18
4039 5481 3.135225 TGTTGATGTACGGAACCAGTTG 58.865 45.455 0.00 0.00 0.00 3.16
4040 5482 3.181458 ACTGTTGATGTACGGAACCAGTT 60.181 43.478 2.56 0.00 0.00 3.16
4041 5483 2.367567 ACTGTTGATGTACGGAACCAGT 59.632 45.455 2.56 2.56 0.00 4.00
4042 5484 3.040147 ACTGTTGATGTACGGAACCAG 57.960 47.619 0.00 0.00 0.00 4.00
4043 5485 4.202233 TGTTACTGTTGATGTACGGAACCA 60.202 41.667 0.00 0.00 0.00 3.67
4044 5486 4.309099 TGTTACTGTTGATGTACGGAACC 58.691 43.478 0.00 0.00 0.00 3.62
4045 5487 6.476243 AATGTTACTGTTGATGTACGGAAC 57.524 37.500 0.00 0.00 0.00 3.62
4046 5488 6.932400 AGAAATGTTACTGTTGATGTACGGAA 59.068 34.615 0.00 0.00 0.00 4.30
4047 5489 6.460781 AGAAATGTTACTGTTGATGTACGGA 58.539 36.000 0.00 0.00 0.00 4.69
4048 5490 6.721571 AGAAATGTTACTGTTGATGTACGG 57.278 37.500 0.00 0.00 0.00 4.02
4049 5491 6.519761 GCAAGAAATGTTACTGTTGATGTACG 59.480 38.462 0.00 0.00 0.00 3.67
4050 5492 7.359595 TGCAAGAAATGTTACTGTTGATGTAC 58.640 34.615 0.00 0.00 0.00 2.90
4051 5493 7.503521 TGCAAGAAATGTTACTGTTGATGTA 57.496 32.000 0.00 0.00 0.00 2.29
4052 5494 6.389830 TGCAAGAAATGTTACTGTTGATGT 57.610 33.333 0.00 0.00 0.00 3.06
4053 5495 7.222417 TGTTTGCAAGAAATGTTACTGTTGATG 59.778 33.333 0.00 0.00 0.00 3.07
4054 5496 7.264221 TGTTTGCAAGAAATGTTACTGTTGAT 58.736 30.769 0.00 0.00 0.00 2.57
4055 5497 6.625362 TGTTTGCAAGAAATGTTACTGTTGA 58.375 32.000 0.00 0.00 0.00 3.18
4056 5498 6.884096 TGTTTGCAAGAAATGTTACTGTTG 57.116 33.333 0.00 0.00 0.00 3.33
4057 5499 7.382218 GCTATGTTTGCAAGAAATGTTACTGTT 59.618 33.333 0.00 0.00 0.00 3.16
4058 5500 6.863126 GCTATGTTTGCAAGAAATGTTACTGT 59.137 34.615 0.00 0.00 0.00 3.55
4059 5501 6.862608 TGCTATGTTTGCAAGAAATGTTACTG 59.137 34.615 0.00 0.00 37.51 2.74
4060 5502 6.980593 TGCTATGTTTGCAAGAAATGTTACT 58.019 32.000 0.00 0.00 37.51 2.24
4061 5503 7.636259 TTGCTATGTTTGCAAGAAATGTTAC 57.364 32.000 0.00 0.00 44.24 2.50
4071 5513 5.994054 TGGCTTTATTTTGCTATGTTTGCAA 59.006 32.000 0.00 0.00 46.90 4.08
4072 5514 5.407995 GTGGCTTTATTTTGCTATGTTTGCA 59.592 36.000 0.00 0.00 38.80 4.08
4073 5515 5.407995 TGTGGCTTTATTTTGCTATGTTTGC 59.592 36.000 0.00 0.00 0.00 3.68
4074 5516 6.867816 TCTGTGGCTTTATTTTGCTATGTTTG 59.132 34.615 0.00 0.00 0.00 2.93
4075 5517 6.991938 TCTGTGGCTTTATTTTGCTATGTTT 58.008 32.000 0.00 0.00 0.00 2.83
4076 5518 6.588719 TCTGTGGCTTTATTTTGCTATGTT 57.411 33.333 0.00 0.00 0.00 2.71
4077 5519 6.209391 AGTTCTGTGGCTTTATTTTGCTATGT 59.791 34.615 0.00 0.00 0.00 2.29
4078 5520 6.624423 AGTTCTGTGGCTTTATTTTGCTATG 58.376 36.000 0.00 0.00 0.00 2.23
4079 5521 6.840780 AGTTCTGTGGCTTTATTTTGCTAT 57.159 33.333 0.00 0.00 0.00 2.97
4080 5522 7.609918 TGATAGTTCTGTGGCTTTATTTTGCTA 59.390 33.333 0.00 0.00 0.00 3.49
4081 5523 6.434028 TGATAGTTCTGTGGCTTTATTTTGCT 59.566 34.615 0.00 0.00 0.00 3.91
4082 5524 6.620678 TGATAGTTCTGTGGCTTTATTTTGC 58.379 36.000 0.00 0.00 0.00 3.68
4083 5525 8.299570 ACTTGATAGTTCTGTGGCTTTATTTTG 58.700 33.333 0.00 0.00 0.00 2.44
4084 5526 8.409358 ACTTGATAGTTCTGTGGCTTTATTTT 57.591 30.769 0.00 0.00 0.00 1.82
4085 5527 9.167311 CTACTTGATAGTTCTGTGGCTTTATTT 57.833 33.333 0.00 0.00 35.78 1.40
4086 5528 8.540388 TCTACTTGATAGTTCTGTGGCTTTATT 58.460 33.333 0.00 0.00 35.78 1.40
4087 5529 7.982354 GTCTACTTGATAGTTCTGTGGCTTTAT 59.018 37.037 0.00 0.00 35.78 1.40
4088 5530 7.178628 AGTCTACTTGATAGTTCTGTGGCTTTA 59.821 37.037 0.00 0.00 35.78 1.85
4089 5531 6.014156 AGTCTACTTGATAGTTCTGTGGCTTT 60.014 38.462 0.00 0.00 35.78 3.51
4090 5532 5.482175 AGTCTACTTGATAGTTCTGTGGCTT 59.518 40.000 0.00 0.00 35.78 4.35
4091 5533 5.020132 AGTCTACTTGATAGTTCTGTGGCT 58.980 41.667 0.00 0.00 35.78 4.75
4092 5534 5.331876 AGTCTACTTGATAGTTCTGTGGC 57.668 43.478 0.00 0.00 35.78 5.01
4093 5535 7.633193 AGTAGTCTACTTGATAGTTCTGTGG 57.367 40.000 6.71 0.00 34.86 4.17
4110 5552 9.614792 AGTTAAAGTGTTTGATGAAAGTAGTCT 57.385 29.630 0.00 0.00 0.00 3.24
4119 5561 9.554395 TGACTTGATAGTTAAAGTGTTTGATGA 57.446 29.630 0.00 0.00 36.77 2.92
4120 5562 9.599322 GTGACTTGATAGTTAAAGTGTTTGATG 57.401 33.333 0.00 0.00 36.77 3.07
4121 5563 9.337396 TGTGACTTGATAGTTAAAGTGTTTGAT 57.663 29.630 0.00 0.00 36.77 2.57
4122 5564 8.725405 TGTGACTTGATAGTTAAAGTGTTTGA 57.275 30.769 0.00 0.00 36.77 2.69
4125 5567 9.772973 TGTATGTGACTTGATAGTTAAAGTGTT 57.227 29.630 0.00 0.00 36.77 3.32
4126 5568 9.944376 ATGTATGTGACTTGATAGTTAAAGTGT 57.056 29.630 0.00 0.00 36.77 3.55
4133 5575 9.102757 CAAAGCTATGTATGTGACTTGATAGTT 57.897 33.333 0.00 0.00 33.84 2.24
4134 5576 7.225538 GCAAAGCTATGTATGTGACTTGATAGT 59.774 37.037 0.00 0.00 37.31 2.12
4135 5577 7.440556 AGCAAAGCTATGTATGTGACTTGATAG 59.559 37.037 0.00 0.00 36.99 2.08
4136 5578 7.275183 AGCAAAGCTATGTATGTGACTTGATA 58.725 34.615 0.00 0.00 36.99 2.15
4137 5579 6.118170 AGCAAAGCTATGTATGTGACTTGAT 58.882 36.000 0.00 0.00 36.99 2.57
4138 5580 5.491070 AGCAAAGCTATGTATGTGACTTGA 58.509 37.500 0.00 0.00 36.99 3.02
4139 5581 5.808042 AGCAAAGCTATGTATGTGACTTG 57.192 39.130 0.00 0.00 36.99 3.16
4152 5594 9.929180 CCATTATTACTAGTGATAGCAAAGCTA 57.071 33.333 5.39 0.71 45.55 3.32
4153 5595 8.651389 TCCATTATTACTAGTGATAGCAAAGCT 58.349 33.333 5.39 0.00 43.41 3.74
4154 5596 8.833231 TCCATTATTACTAGTGATAGCAAAGC 57.167 34.615 5.39 0.00 0.00 3.51
4189 5631 9.863650 ACTAAGCCTAGACACATTTCTACTATA 57.136 33.333 0.00 0.00 0.00 1.31
4190 5632 8.770010 ACTAAGCCTAGACACATTTCTACTAT 57.230 34.615 0.00 0.00 0.00 2.12
4191 5633 9.339850 CTACTAAGCCTAGACACATTTCTACTA 57.660 37.037 0.00 0.00 0.00 1.82
4192 5634 7.201839 GCTACTAAGCCTAGACACATTTCTACT 60.202 40.741 0.00 0.00 43.40 2.57
4193 5635 6.919115 GCTACTAAGCCTAGACACATTTCTAC 59.081 42.308 0.00 0.00 43.40 2.59
4194 5636 7.040473 GCTACTAAGCCTAGACACATTTCTA 57.960 40.000 0.00 0.00 43.40 2.10
4195 5637 5.908341 GCTACTAAGCCTAGACACATTTCT 58.092 41.667 0.00 0.00 43.40 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.