Multiple sequence alignment - TraesCS2B01G616800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G616800 chr2B 100.000 2442 0 0 1 2442 793790241 793792682 0.000000e+00 4510.0
1 TraesCS2B01G616800 chr2B 86.826 167 17 4 103 268 69178491 69178653 5.360000e-42 182.0
2 TraesCS2B01G616800 chr2D 87.327 868 35 31 672 1523 635768562 635769370 0.000000e+00 924.0
3 TraesCS2B01G616800 chr2D 84.293 191 24 3 101 289 608922454 608922268 5.360000e-42 182.0
4 TraesCS2B01G616800 chr2D 93.636 110 7 0 1814 1923 315859248 315859139 5.400000e-37 165.0
5 TraesCS2B01G616800 chr2D 93.636 110 7 0 1814 1923 380694290 380694399 5.400000e-37 165.0
6 TraesCS2B01G616800 chr2D 82.812 192 25 6 104 292 543532693 543532507 5.400000e-37 165.0
7 TraesCS2B01G616800 chr2D 92.647 68 4 1 5 71 635763766 635763833 2.000000e-16 97.1
8 TraesCS2B01G616800 chrUn 93.053 619 27 4 1 617 124823095 124822491 0.000000e+00 891.0
9 TraesCS2B01G616800 chrUn 81.995 411 31 21 677 1058 124822215 124821819 2.360000e-80 309.0
10 TraesCS2B01G616800 chrUn 95.588 136 2 1 2307 2442 124821126 124820995 5.290000e-52 215.0
11 TraesCS2B01G616800 chrUn 94.815 135 6 1 2177 2311 124821379 124821246 2.460000e-50 209.0
12 TraesCS2B01G616800 chrUn 100.000 32 0 0 2108 2139 124821462 124821431 2.620000e-05 60.2
13 TraesCS2B01G616800 chr3A 87.958 191 18 2 103 292 507298413 507298227 1.140000e-53 220.0
14 TraesCS2B01G616800 chr3A 85.340 191 23 2 103 292 372572104 372572290 2.480000e-45 193.0
15 TraesCS2B01G616800 chr3A 84.536 97 13 1 1813 1909 79263201 79263295 7.190000e-16 95.3
16 TraesCS2B01G616800 chr7A 85.864 191 21 3 104 292 70830303 70830489 5.330000e-47 198.0
17 TraesCS2B01G616800 chr7A 85.789 190 21 4 104 292 515222570 515222386 1.920000e-46 196.0
18 TraesCS2B01G616800 chr7A 84.729 203 21 8 94 292 573456813 573456617 6.890000e-46 195.0
19 TraesCS2B01G616800 chr7A 92.105 114 9 0 1814 1927 669666357 669666470 6.990000e-36 161.0
20 TraesCS2B01G616800 chr6B 86.486 185 19 3 104 287 40652279 40652458 5.330000e-47 198.0
21 TraesCS2B01G616800 chr6B 92.500 40 2 1 294 332 687082611 687082572 3.390000e-04 56.5
22 TraesCS2B01G616800 chr5B 85.641 195 21 4 100 292 92658821 92658632 5.330000e-47 198.0
23 TraesCS2B01G616800 chr5B 80.628 191 32 3 103 292 447838216 447838030 2.530000e-30 143.0
24 TraesCS2B01G616800 chr1B 84.772 197 20 7 99 292 231661996 231661807 3.210000e-44 189.0
25 TraesCS2B01G616800 chr3B 93.103 116 8 0 1812 1927 652732871 652732756 1.160000e-38 171.0
26 TraesCS2B01G616800 chr1A 92.982 114 8 0 1814 1927 543656524 543656411 1.500000e-37 167.0
27 TraesCS2B01G616800 chr1A 92.308 117 9 0 1811 1927 572865329 572865213 1.500000e-37 167.0
28 TraesCS2B01G616800 chr1A 90.909 99 9 0 1811 1909 593753240 593753338 1.520000e-27 134.0
29 TraesCS2B01G616800 chr1A 92.857 42 1 1 1924 1963 53445314 53445355 2.620000e-05 60.2
30 TraesCS2B01G616800 chr3D 91.379 116 10 0 1813 1928 355704114 355704229 2.510000e-35 159.0
31 TraesCS2B01G616800 chr3D 88.636 132 13 2 1806 1936 385467484 385467354 2.510000e-35 159.0
32 TraesCS2B01G616800 chr5D 91.228 114 10 0 1814 1927 279292871 279292984 3.250000e-34 156.0
33 TraesCS2B01G616800 chr7B 86.111 108 15 0 143 250 699906267 699906374 1.530000e-22 117.0
34 TraesCS2B01G616800 chr7D 82.474 97 17 0 168 264 610826441 610826537 4.330000e-13 86.1
35 TraesCS2B01G616800 chr1D 80.531 113 18 4 1000 1110 357457836 357457946 1.560000e-12 84.2
36 TraesCS2B01G616800 chr4D 94.872 39 1 1 295 332 323597627 323597589 2.620000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G616800 chr2B 793790241 793792682 2441 False 4510.00 4510 100.0000 1 2442 1 chr2B.!!$F2 2441
1 TraesCS2B01G616800 chr2D 635768562 635769370 808 False 924.00 924 87.3270 672 1523 1 chr2D.!!$F3 851
2 TraesCS2B01G616800 chrUn 124820995 124823095 2100 True 336.84 891 93.0902 1 2442 5 chrUn.!!$R1 2441

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 389 0.03759 TTGCTACATGACCCCACCAC 59.962 55.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2379 0.028902 CTCACCGATGATGCGACGTA 59.971 55.0 0.0 0.0 33.22 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
269 270 8.631480 AATCTAATGATGCTGATTTGCTATCA 57.369 30.769 0.00 0.00 36.11 2.15
270 271 8.809468 ATCTAATGATGCTGATTTGCTATCAT 57.191 30.769 3.13 0.00 39.92 2.45
323 324 7.039784 AGCTTGATTTTGACCAAAGCTAATACA 60.040 33.333 6.43 0.00 31.55 2.29
328 329 3.592059 TGACCAAAGCTAATACACGGAC 58.408 45.455 0.00 0.00 0.00 4.79
388 389 0.037590 TTGCTACATGACCCCACCAC 59.962 55.000 0.00 0.00 0.00 4.16
402 403 2.099098 CCCACCACACTCTTTCACAAAC 59.901 50.000 0.00 0.00 0.00 2.93
468 469 6.490040 CCCCTCTCTTCAATAACTCAACAAAA 59.510 38.462 0.00 0.00 0.00 2.44
469 470 7.308830 CCCCTCTCTTCAATAACTCAACAAAAG 60.309 40.741 0.00 0.00 0.00 2.27
470 471 7.229506 CCCTCTCTTCAATAACTCAACAAAAGT 59.770 37.037 0.00 0.00 0.00 2.66
471 472 9.273016 CCTCTCTTCAATAACTCAACAAAAGTA 57.727 33.333 0.00 0.00 0.00 2.24
507 510 7.084486 GTCTCAAAATATGACACTTTTGGTCC 58.916 38.462 18.13 8.10 40.86 4.46
510 513 7.786030 TCAAAATATGACACTTTTGGTCCAAA 58.214 30.769 13.26 13.26 40.86 3.28
617 620 3.846588 TGCTCTTAGTGGGAAAGAAGGAT 59.153 43.478 0.00 0.00 32.77 3.24
618 621 5.030147 TGCTCTTAGTGGGAAAGAAGGATA 58.970 41.667 0.00 0.00 32.77 2.59
619 622 5.129485 TGCTCTTAGTGGGAAAGAAGGATAG 59.871 44.000 0.00 0.00 32.77 2.08
620 623 5.606505 CTCTTAGTGGGAAAGAAGGATAGC 58.393 45.833 0.00 0.00 32.77 2.97
621 624 2.990066 AGTGGGAAAGAAGGATAGCG 57.010 50.000 0.00 0.00 0.00 4.26
622 625 2.188817 AGTGGGAAAGAAGGATAGCGT 58.811 47.619 0.00 0.00 0.00 5.07
623 626 3.371965 AGTGGGAAAGAAGGATAGCGTA 58.628 45.455 0.00 0.00 0.00 4.42
624 627 3.385111 AGTGGGAAAGAAGGATAGCGTAG 59.615 47.826 0.00 0.00 0.00 3.51
625 628 2.698797 TGGGAAAGAAGGATAGCGTAGG 59.301 50.000 0.00 0.00 0.00 3.18
626 629 2.699321 GGGAAAGAAGGATAGCGTAGGT 59.301 50.000 0.00 0.00 44.89 3.08
627 630 3.243805 GGGAAAGAAGGATAGCGTAGGTC 60.244 52.174 0.00 0.00 40.68 3.85
628 631 3.637694 GGAAAGAAGGATAGCGTAGGTCT 59.362 47.826 0.00 0.00 40.68 3.85
629 632 4.826183 GGAAAGAAGGATAGCGTAGGTCTA 59.174 45.833 0.00 0.00 40.68 2.59
630 633 5.048573 GGAAAGAAGGATAGCGTAGGTCTAG 60.049 48.000 0.00 0.00 40.68 2.43
631 634 3.414269 AGAAGGATAGCGTAGGTCTAGC 58.586 50.000 0.00 0.00 40.68 3.42
632 635 2.953284 AGGATAGCGTAGGTCTAGCA 57.047 50.000 0.00 0.00 40.68 3.49
633 636 3.443145 AGGATAGCGTAGGTCTAGCAT 57.557 47.619 0.00 0.00 40.68 3.79
634 637 3.768878 AGGATAGCGTAGGTCTAGCATT 58.231 45.455 0.00 0.00 40.68 3.56
635 638 4.153411 AGGATAGCGTAGGTCTAGCATTT 58.847 43.478 0.00 0.00 40.68 2.32
636 639 4.589374 AGGATAGCGTAGGTCTAGCATTTT 59.411 41.667 0.00 0.00 40.68 1.82
637 640 5.070580 AGGATAGCGTAGGTCTAGCATTTTT 59.929 40.000 0.00 0.00 40.68 1.94
657 660 6.459670 TTTTTAGAGTTGAGGGACCAAAAC 57.540 37.500 0.00 0.00 0.00 2.43
658 661 4.781775 TTAGAGTTGAGGGACCAAAACA 57.218 40.909 0.00 0.00 0.00 2.83
659 662 2.932261 AGAGTTGAGGGACCAAAACAC 58.068 47.619 0.00 3.36 0.00 3.32
660 663 2.241176 AGAGTTGAGGGACCAAAACACA 59.759 45.455 0.00 0.00 0.00 3.72
661 664 2.618709 GAGTTGAGGGACCAAAACACAG 59.381 50.000 0.00 0.00 0.00 3.66
662 665 2.241176 AGTTGAGGGACCAAAACACAGA 59.759 45.455 0.00 0.00 0.00 3.41
663 666 2.341846 TGAGGGACCAAAACACAGAC 57.658 50.000 0.00 0.00 0.00 3.51
664 667 1.843851 TGAGGGACCAAAACACAGACT 59.156 47.619 0.00 0.00 0.00 3.24
665 668 2.158813 TGAGGGACCAAAACACAGACTC 60.159 50.000 0.00 0.00 0.00 3.36
666 669 1.202651 AGGGACCAAAACACAGACTCG 60.203 52.381 0.00 0.00 0.00 4.18
667 670 1.202604 GGGACCAAAACACAGACTCGA 60.203 52.381 0.00 0.00 0.00 4.04
668 671 2.135933 GGACCAAAACACAGACTCGAG 58.864 52.381 11.84 11.84 0.00 4.04
669 672 2.135933 GACCAAAACACAGACTCGAGG 58.864 52.381 18.41 1.00 0.00 4.63
670 673 1.202651 ACCAAAACACAGACTCGAGGG 60.203 52.381 18.41 8.40 0.00 4.30
671 674 1.512926 CAAAACACAGACTCGAGGGG 58.487 55.000 18.41 8.02 0.00 4.79
672 675 0.396811 AAAACACAGACTCGAGGGGG 59.603 55.000 18.41 9.51 0.00 5.40
698 917 8.352942 GGGCCAAATCATACTAGACTTTAATTG 58.647 37.037 4.39 0.00 0.00 2.32
875 1098 1.882989 GCATGTTGGCGGGGCTAAAA 61.883 55.000 0.00 0.00 29.49 1.52
902 1125 4.326009 GCTTGCGTGAAACAAAGAAAGAAA 59.674 37.500 0.00 0.00 35.74 2.52
903 1126 5.499176 GCTTGCGTGAAACAAAGAAAGAAAG 60.499 40.000 0.00 0.00 35.74 2.62
910 1137 7.520614 CGTGAAACAAAGAAAGAAAGAGCCTAT 60.521 37.037 0.00 0.00 35.74 2.57
915 1142 6.821160 ACAAAGAAAGAAAGAGCCTATCTAGC 59.179 38.462 0.00 0.00 37.23 3.42
942 1169 4.553668 TCGTCGTCGATCCATCCT 57.446 55.556 0.00 0.00 41.35 3.24
943 1170 2.789842 TCGTCGTCGATCCATCCTT 58.210 52.632 0.00 0.00 41.35 3.36
945 1172 0.657659 CGTCGTCGATCCATCCTTCG 60.658 60.000 0.00 0.00 39.71 3.79
946 1173 0.317938 GTCGTCGATCCATCCTTCGG 60.318 60.000 0.00 0.00 36.08 4.30
947 1174 0.750546 TCGTCGATCCATCCTTCGGT 60.751 55.000 0.00 0.00 36.08 4.69
948 1175 0.595053 CGTCGATCCATCCTTCGGTG 60.595 60.000 0.00 0.00 36.08 4.94
950 1177 1.032794 TCGATCCATCCTTCGGTGAG 58.967 55.000 0.00 0.00 36.08 3.51
951 1178 1.032794 CGATCCATCCTTCGGTGAGA 58.967 55.000 0.00 0.00 0.00 3.27
952 1179 1.409064 CGATCCATCCTTCGGTGAGAA 59.591 52.381 0.00 0.00 37.31 2.87
987 1225 4.404098 GGCCGGCGAGGAAGGAAA 62.404 66.667 22.54 0.00 45.00 3.13
989 1227 2.125106 CCGGCGAGGAAGGAAAGG 60.125 66.667 9.30 0.00 45.00 3.11
1236 1563 3.435313 CCCTCTACGACTACCTCCTCAAT 60.435 52.174 0.00 0.00 0.00 2.57
1249 1584 4.852697 ACCTCCTCAATCCTAAGAAGGTTT 59.147 41.667 0.00 0.00 44.09 3.27
1271 1608 9.862371 GGTTTTTCTTCTTCTTCTTTCTTCTTT 57.138 29.630 0.00 0.00 0.00 2.52
1323 1660 2.042569 ACATGGATGGATGGATGGATGG 59.957 50.000 0.00 0.00 0.00 3.51
1328 1665 2.136974 TGGATGGATGGATGGATGGA 57.863 50.000 0.00 0.00 0.00 3.41
1329 1666 2.651190 TGGATGGATGGATGGATGGAT 58.349 47.619 0.00 0.00 0.00 3.41
1330 1667 2.579400 TGGATGGATGGATGGATGGATC 59.421 50.000 0.00 0.00 0.00 3.36
1331 1668 2.421107 GGATGGATGGATGGATGGATCG 60.421 54.545 0.00 0.00 0.00 3.69
1332 1669 2.028561 TGGATGGATGGATGGATCGA 57.971 50.000 0.00 0.00 0.00 3.59
1333 1670 2.554563 TGGATGGATGGATGGATCGAT 58.445 47.619 0.00 0.00 0.00 3.59
1334 1671 2.237893 TGGATGGATGGATGGATCGATG 59.762 50.000 0.54 0.00 0.00 3.84
1335 1672 2.286872 GATGGATGGATGGATCGATGC 58.713 52.381 10.37 10.37 34.75 3.91
1336 1673 1.058284 TGGATGGATGGATCGATGCA 58.942 50.000 22.37 22.37 40.03 3.96
1337 1674 1.631898 TGGATGGATGGATCGATGCAT 59.368 47.619 29.62 29.62 38.14 3.96
1338 1675 2.040679 TGGATGGATGGATCGATGCATT 59.959 45.455 29.74 16.75 38.14 3.56
1339 1676 2.422479 GGATGGATGGATCGATGCATTG 59.578 50.000 29.74 7.70 39.04 2.82
1340 1677 1.900245 TGGATGGATCGATGCATTGG 58.100 50.000 29.74 3.25 39.04 3.16
1451 1788 6.628919 AATCCACCGCTTAATTATTACCAC 57.371 37.500 0.00 0.00 0.00 4.16
1455 1792 5.008316 CCACCGCTTAATTATTACCACCTTC 59.992 44.000 0.00 0.00 0.00 3.46
1465 1802 8.753497 AATTATTACCACCTTCATTCTTCTCC 57.247 34.615 0.00 0.00 0.00 3.71
1466 1803 7.510675 TTATTACCACCTTCATTCTTCTCCT 57.489 36.000 0.00 0.00 0.00 3.69
1467 1804 8.618240 TTATTACCACCTTCATTCTTCTCCTA 57.382 34.615 0.00 0.00 0.00 2.94
1468 1805 6.945636 TTACCACCTTCATTCTTCTCCTAA 57.054 37.500 0.00 0.00 0.00 2.69
1482 1819 7.300556 TCTTCTCCTAATTCCATCATCTCAG 57.699 40.000 0.00 0.00 0.00 3.35
1483 1820 6.843333 TCTTCTCCTAATTCCATCATCTCAGT 59.157 38.462 0.00 0.00 0.00 3.41
1484 1821 6.662865 TCTCCTAATTCCATCATCTCAGTC 57.337 41.667 0.00 0.00 0.00 3.51
1485 1822 6.138967 TCTCCTAATTCCATCATCTCAGTCA 58.861 40.000 0.00 0.00 0.00 3.41
1486 1823 6.612863 TCTCCTAATTCCATCATCTCAGTCAA 59.387 38.462 0.00 0.00 0.00 3.18
1487 1824 6.824553 TCCTAATTCCATCATCTCAGTCAAG 58.175 40.000 0.00 0.00 0.00 3.02
1488 1825 6.385176 TCCTAATTCCATCATCTCAGTCAAGT 59.615 38.462 0.00 0.00 0.00 3.16
1489 1826 7.565029 TCCTAATTCCATCATCTCAGTCAAGTA 59.435 37.037 0.00 0.00 0.00 2.24
1490 1827 7.655328 CCTAATTCCATCATCTCAGTCAAGTAC 59.345 40.741 0.00 0.00 0.00 2.73
1499 1836 2.228103 CTCAGTCAAGTACAGTACCGCA 59.772 50.000 7.13 0.00 0.00 5.69
1500 1837 2.624364 TCAGTCAAGTACAGTACCGCAA 59.376 45.455 7.13 0.00 0.00 4.85
1523 1860 6.913873 AGCAAACAAGAAGAAACTAACGTA 57.086 33.333 0.00 0.00 0.00 3.57
1524 1861 6.712549 AGCAAACAAGAAGAAACTAACGTAC 58.287 36.000 0.00 0.00 0.00 3.67
1525 1862 5.614382 GCAAACAAGAAGAAACTAACGTACG 59.386 40.000 15.01 15.01 0.00 3.67
1526 1863 4.961433 ACAAGAAGAAACTAACGTACGC 57.039 40.909 16.72 0.00 0.00 4.42
1527 1864 3.737774 ACAAGAAGAAACTAACGTACGCC 59.262 43.478 16.72 0.00 0.00 5.68
1528 1865 3.648339 AGAAGAAACTAACGTACGCCA 57.352 42.857 16.72 1.75 0.00 5.69
1529 1866 3.981211 AGAAGAAACTAACGTACGCCAA 58.019 40.909 16.72 0.00 0.00 4.52
1530 1867 4.563061 AGAAGAAACTAACGTACGCCAAT 58.437 39.130 16.72 1.76 0.00 3.16
1531 1868 5.713025 AGAAGAAACTAACGTACGCCAATA 58.287 37.500 16.72 2.94 0.00 1.90
1532 1869 6.335777 AGAAGAAACTAACGTACGCCAATAT 58.664 36.000 16.72 0.00 0.00 1.28
1533 1870 7.483307 AGAAGAAACTAACGTACGCCAATATA 58.517 34.615 16.72 0.00 0.00 0.86
1534 1871 8.139989 AGAAGAAACTAACGTACGCCAATATAT 58.860 33.333 16.72 0.00 0.00 0.86
1535 1872 9.398170 GAAGAAACTAACGTACGCCAATATATA 57.602 33.333 16.72 0.00 0.00 0.86
1536 1873 9.748708 AAGAAACTAACGTACGCCAATATATAA 57.251 29.630 16.72 0.00 0.00 0.98
1537 1874 9.403110 AGAAACTAACGTACGCCAATATATAAG 57.597 33.333 16.72 0.85 0.00 1.73
1538 1875 9.398170 GAAACTAACGTACGCCAATATATAAGA 57.602 33.333 16.72 0.00 0.00 2.10
1539 1876 9.918630 AAACTAACGTACGCCAATATATAAGAT 57.081 29.630 16.72 0.00 0.00 2.40
1540 1877 9.918630 AACTAACGTACGCCAATATATAAGATT 57.081 29.630 16.72 0.00 0.00 2.40
1541 1878 9.350357 ACTAACGTACGCCAATATATAAGATTG 57.650 33.333 16.72 4.47 34.63 2.67
1542 1879 6.642683 ACGTACGCCAATATATAAGATTGC 57.357 37.500 16.72 0.00 33.70 3.56
1543 1880 5.579511 ACGTACGCCAATATATAAGATTGCC 59.420 40.000 16.72 0.00 33.70 4.52
1544 1881 5.579119 CGTACGCCAATATATAAGATTGCCA 59.421 40.000 0.52 0.00 33.70 4.92
1545 1882 5.880054 ACGCCAATATATAAGATTGCCAC 57.120 39.130 5.56 0.00 33.70 5.01
1546 1883 5.312895 ACGCCAATATATAAGATTGCCACA 58.687 37.500 5.56 0.00 33.70 4.17
1547 1884 5.181245 ACGCCAATATATAAGATTGCCACAC 59.819 40.000 5.56 0.00 33.70 3.82
1548 1885 5.181056 CGCCAATATATAAGATTGCCACACA 59.819 40.000 5.56 0.00 33.70 3.72
1549 1886 6.381801 GCCAATATATAAGATTGCCACACAC 58.618 40.000 5.56 0.00 33.70 3.82
1550 1887 6.016360 GCCAATATATAAGATTGCCACACACA 60.016 38.462 5.56 0.00 33.70 3.72
1551 1888 7.309377 GCCAATATATAAGATTGCCACACACAT 60.309 37.037 5.56 0.00 33.70 3.21
1552 1889 9.230122 CCAATATATAAGATTGCCACACACATA 57.770 33.333 5.56 0.00 33.70 2.29
1555 1892 7.969536 ATATAAGATTGCCACACACATACTC 57.030 36.000 0.00 0.00 0.00 2.59
1556 1893 2.991250 AGATTGCCACACACATACTCC 58.009 47.619 0.00 0.00 0.00 3.85
1557 1894 2.305635 AGATTGCCACACACATACTCCA 59.694 45.455 0.00 0.00 0.00 3.86
1558 1895 2.877097 TTGCCACACACATACTCCAT 57.123 45.000 0.00 0.00 0.00 3.41
1559 1896 3.990959 TTGCCACACACATACTCCATA 57.009 42.857 0.00 0.00 0.00 2.74
1560 1897 4.502105 TTGCCACACACATACTCCATAT 57.498 40.909 0.00 0.00 0.00 1.78
1561 1898 3.807553 TGCCACACACATACTCCATATG 58.192 45.455 0.00 0.00 45.55 1.78
1578 1915 9.877178 ACTCCATATGTTGTAATTATAGCTAGC 57.123 33.333 6.62 6.62 0.00 3.42
1581 1918 9.319143 CCATATGTTGTAATTATAGCTAGCTCC 57.681 37.037 23.26 2.33 0.00 4.70
1582 1919 9.025020 CATATGTTGTAATTATAGCTAGCTCCG 57.975 37.037 23.26 0.00 0.00 4.63
1583 1920 5.779922 TGTTGTAATTATAGCTAGCTCCGG 58.220 41.667 23.26 0.00 0.00 5.14
1584 1921 4.451629 TGTAATTATAGCTAGCTCCGGC 57.548 45.455 23.26 7.02 39.06 6.13
1585 1922 3.194968 TGTAATTATAGCTAGCTCCGGCC 59.805 47.826 23.26 5.21 39.73 6.13
1586 1923 0.818296 ATTATAGCTAGCTCCGGCCG 59.182 55.000 23.26 21.04 39.73 6.13
1587 1924 1.248785 TTATAGCTAGCTCCGGCCGG 61.249 60.000 39.13 39.13 39.73 6.13
1592 1929 4.926162 TAGCTCCGGCCGGGCATA 62.926 66.667 40.48 30.30 39.73 3.14
1595 1932 3.941188 CTCCGGCCGGGCATATGT 61.941 66.667 42.36 0.00 34.94 2.29
1596 1933 2.524640 TCCGGCCGGGCATATGTA 60.525 61.111 42.36 19.62 34.94 2.29
1597 1934 1.899437 CTCCGGCCGGGCATATGTAT 61.899 60.000 42.36 0.00 34.94 2.29
1598 1935 0.615261 TCCGGCCGGGCATATGTATA 60.615 55.000 42.36 17.96 34.94 1.47
1599 1936 0.179084 CCGGCCGGGCATATGTATAG 60.179 60.000 37.42 5.42 0.00 1.31
1600 1937 0.810031 CGGCCGGGCATATGTATAGC 60.810 60.000 29.19 3.24 0.00 2.97
1601 1938 0.541863 GGCCGGGCATATGTATAGCT 59.458 55.000 25.33 0.00 0.00 3.32
1602 1939 1.760613 GGCCGGGCATATGTATAGCTA 59.239 52.381 25.33 0.00 0.00 3.32
1603 1940 2.224066 GGCCGGGCATATGTATAGCTAG 60.224 54.545 25.33 0.00 0.00 3.42
1604 1941 2.803492 GCCGGGCATATGTATAGCTAGC 60.803 54.545 15.62 6.62 0.00 3.42
1605 1942 2.695666 CCGGGCATATGTATAGCTAGCT 59.304 50.000 23.12 23.12 0.00 3.32
1606 1943 3.889538 CCGGGCATATGTATAGCTAGCTA 59.110 47.826 26.09 26.09 0.00 3.32
1607 1944 4.022762 CCGGGCATATGTATAGCTAGCTAG 60.023 50.000 27.42 16.84 31.45 3.42
1617 1954 3.984838 GCTAGCTAGCTGTCTGCAT 57.015 52.632 33.71 0.22 45.62 3.96
1618 1955 1.500108 GCTAGCTAGCTGTCTGCATG 58.500 55.000 33.71 7.75 45.62 4.06
1619 1956 1.500108 CTAGCTAGCTGTCTGCATGC 58.500 55.000 27.68 11.82 45.94 4.06
1620 1957 1.906253 AGCTAGCTGTCTGCATGCT 59.094 52.632 18.57 13.01 45.94 3.79
1621 1958 0.462225 AGCTAGCTGTCTGCATGCTG 60.462 55.000 18.57 18.97 45.46 4.41
1622 1959 2.015382 CTAGCTGTCTGCATGCTGC 58.985 57.895 20.33 14.44 45.94 5.25
1637 1974 2.245159 GCTGCATGCAGTATACTCCA 57.755 50.000 39.95 0.00 45.24 3.86
1638 1975 2.775890 GCTGCATGCAGTATACTCCAT 58.224 47.619 39.95 3.28 45.24 3.41
1639 1976 3.930336 GCTGCATGCAGTATACTCCATA 58.070 45.455 39.95 7.42 45.24 2.74
1640 1977 4.511527 GCTGCATGCAGTATACTCCATAT 58.488 43.478 39.95 0.00 45.24 1.78
1641 1978 4.331992 GCTGCATGCAGTATACTCCATATG 59.668 45.833 39.95 17.56 45.24 1.78
1642 1979 5.485620 CTGCATGCAGTATACTCCATATGT 58.514 41.667 34.76 0.00 39.10 2.29
1643 1980 5.868454 TGCATGCAGTATACTCCATATGTT 58.132 37.500 18.46 0.00 0.00 2.71
1644 1981 6.298361 TGCATGCAGTATACTCCATATGTTT 58.702 36.000 18.46 0.00 0.00 2.83
1645 1982 7.449247 TGCATGCAGTATACTCCATATGTTTA 58.551 34.615 18.46 0.00 0.00 2.01
1646 1983 8.102676 TGCATGCAGTATACTCCATATGTTTAT 58.897 33.333 18.46 0.00 0.00 1.40
1647 1984 8.393366 GCATGCAGTATACTCCATATGTTTATG 58.607 37.037 14.21 0.00 35.87 1.90
1648 1985 9.440773 CATGCAGTATACTCCATATGTTTATGT 57.559 33.333 9.00 0.00 34.54 2.29
1650 1987 9.923143 TGCAGTATACTCCATATGTTTATGTAC 57.077 33.333 1.26 0.00 34.54 2.90
1651 1988 9.073368 GCAGTATACTCCATATGTTTATGTACG 57.927 37.037 1.26 0.00 34.54 3.67
1658 1995 9.999009 ACTCCATATGTTTATGTACGATATACG 57.001 33.333 1.24 0.00 39.64 3.06
1659 1996 9.999009 CTCCATATGTTTATGTACGATATACGT 57.001 33.333 1.24 0.00 43.43 3.57
1676 2013 9.221775 CGATATACGTATTGATTCATTCATCGA 57.778 33.333 14.33 0.00 37.22 3.59
1679 2016 8.986477 ATACGTATTGATTCATTCATCGATGA 57.014 30.769 23.99 23.99 33.34 2.92
1680 2017 7.343614 ACGTATTGATTCATTCATCGATGAG 57.656 36.000 25.95 16.77 37.35 2.90
1681 2018 6.128715 ACGTATTGATTCATTCATCGATGAGC 60.129 38.462 25.95 9.99 37.35 4.26
1682 2019 6.128742 CGTATTGATTCATTCATCGATGAGCA 60.129 38.462 25.95 14.63 37.35 4.26
1683 2020 5.413969 TTGATTCATTCATCGATGAGCAC 57.586 39.130 25.95 15.85 37.35 4.40
1684 2021 3.492011 TGATTCATTCATCGATGAGCACG 59.508 43.478 25.95 16.12 37.35 5.34
1685 2022 2.584492 TCATTCATCGATGAGCACGT 57.416 45.000 25.95 10.10 38.19 4.49
1686 2023 2.195922 TCATTCATCGATGAGCACGTG 58.804 47.619 25.95 19.38 38.19 4.49
1687 2024 1.929169 CATTCATCGATGAGCACGTGT 59.071 47.619 25.95 3.69 38.19 4.49
1688 2025 1.629013 TTCATCGATGAGCACGTGTC 58.371 50.000 25.95 13.53 38.19 3.67
1689 2026 0.179137 TCATCGATGAGCACGTGTCC 60.179 55.000 23.99 9.77 32.11 4.02
1690 2027 0.458370 CATCGATGAGCACGTGTCCA 60.458 55.000 21.02 15.22 0.00 4.02
1691 2028 0.461548 ATCGATGAGCACGTGTCCAT 59.538 50.000 18.38 19.11 0.00 3.41
1692 2029 0.458370 TCGATGAGCACGTGTCCATG 60.458 55.000 22.89 16.43 0.00 3.66
1693 2030 0.737367 CGATGAGCACGTGTCCATGT 60.737 55.000 22.89 7.17 0.00 3.21
1694 2031 1.469079 CGATGAGCACGTGTCCATGTA 60.469 52.381 22.89 4.03 0.00 2.29
1695 2032 2.616960 GATGAGCACGTGTCCATGTAA 58.383 47.619 22.89 3.72 0.00 2.41
1696 2033 2.760634 TGAGCACGTGTCCATGTAAT 57.239 45.000 18.38 0.00 0.00 1.89
1697 2034 3.052455 TGAGCACGTGTCCATGTAATT 57.948 42.857 18.38 0.00 0.00 1.40
1698 2035 4.195225 TGAGCACGTGTCCATGTAATTA 57.805 40.909 18.38 0.00 0.00 1.40
1699 2036 4.570930 TGAGCACGTGTCCATGTAATTAA 58.429 39.130 18.38 0.00 0.00 1.40
1700 2037 4.998033 TGAGCACGTGTCCATGTAATTAAA 59.002 37.500 18.38 0.00 0.00 1.52
1701 2038 5.470437 TGAGCACGTGTCCATGTAATTAAAA 59.530 36.000 18.38 0.00 0.00 1.52
1702 2039 6.150307 TGAGCACGTGTCCATGTAATTAAAAT 59.850 34.615 18.38 0.00 0.00 1.82
1703 2040 6.321717 AGCACGTGTCCATGTAATTAAAATG 58.678 36.000 18.38 0.00 0.00 2.32
1704 2041 5.514914 GCACGTGTCCATGTAATTAAAATGG 59.485 40.000 18.38 17.10 41.93 3.16
1705 2042 6.616947 CACGTGTCCATGTAATTAAAATGGT 58.383 36.000 20.28 5.86 41.41 3.55
1706 2043 7.626664 GCACGTGTCCATGTAATTAAAATGGTA 60.627 37.037 18.38 12.44 41.41 3.25
1707 2044 8.402472 CACGTGTCCATGTAATTAAAATGGTAT 58.598 33.333 20.28 7.20 41.41 2.73
1708 2045 8.402472 ACGTGTCCATGTAATTAAAATGGTATG 58.598 33.333 20.28 17.87 41.41 2.39
1709 2046 7.860373 CGTGTCCATGTAATTAAAATGGTATGG 59.140 37.037 20.28 6.41 41.41 2.74
1710 2047 8.691797 GTGTCCATGTAATTAAAATGGTATGGT 58.308 33.333 20.28 0.00 41.41 3.55
1711 2048 8.690884 TGTCCATGTAATTAAAATGGTATGGTG 58.309 33.333 20.28 0.00 41.41 4.17
1712 2049 8.141268 GTCCATGTAATTAAAATGGTATGGTGG 58.859 37.037 20.28 4.70 41.41 4.61
1713 2050 7.841729 TCCATGTAATTAAAATGGTATGGTGGT 59.158 33.333 20.28 0.00 41.41 4.16
1714 2051 8.141268 CCATGTAATTAAAATGGTATGGTGGTC 58.859 37.037 15.74 0.00 36.82 4.02
1715 2052 8.690884 CATGTAATTAAAATGGTATGGTGGTCA 58.309 33.333 0.00 0.00 0.00 4.02
1716 2053 8.651589 TGTAATTAAAATGGTATGGTGGTCAA 57.348 30.769 0.00 0.00 0.00 3.18
1717 2054 8.744652 TGTAATTAAAATGGTATGGTGGTCAAG 58.255 33.333 0.00 0.00 0.00 3.02
1718 2055 7.790782 AATTAAAATGGTATGGTGGTCAAGT 57.209 32.000 0.00 0.00 0.00 3.16
1719 2056 7.790782 ATTAAAATGGTATGGTGGTCAAGTT 57.209 32.000 0.00 0.00 0.00 2.66
1720 2057 5.467035 AAAATGGTATGGTGGTCAAGTTG 57.533 39.130 0.00 0.00 0.00 3.16
1721 2058 4.380843 AATGGTATGGTGGTCAAGTTGA 57.619 40.909 0.08 0.08 0.00 3.18
1722 2059 3.134574 TGGTATGGTGGTCAAGTTGAC 57.865 47.619 25.00 25.00 46.23 3.18
1736 2073 7.923414 GTCAAGTTGACCCATTTTATCTACT 57.077 36.000 23.03 0.00 41.37 2.57
1737 2074 8.336801 GTCAAGTTGACCCATTTTATCTACTT 57.663 34.615 23.03 0.00 41.37 2.24
1738 2075 8.793592 GTCAAGTTGACCCATTTTATCTACTTT 58.206 33.333 23.03 0.00 41.37 2.66
1739 2076 9.362151 TCAAGTTGACCCATTTTATCTACTTTT 57.638 29.630 0.08 0.00 36.65 2.27
1740 2077 9.981114 CAAGTTGACCCATTTTATCTACTTTTT 57.019 29.630 0.00 0.00 36.65 1.94
1764 2101 7.408756 TTTTCCTCACATTTATCAGGATTGG 57.591 36.000 0.00 0.00 34.92 3.16
1765 2102 5.052693 TCCTCACATTTATCAGGATTGGG 57.947 43.478 0.00 0.00 29.57 4.12
1766 2103 4.141181 TCCTCACATTTATCAGGATTGGGG 60.141 45.833 0.00 0.00 29.57 4.96
1767 2104 4.386761 CCTCACATTTATCAGGATTGGGGT 60.387 45.833 0.00 0.00 0.00 4.95
1768 2105 5.203528 CTCACATTTATCAGGATTGGGGTT 58.796 41.667 0.00 0.00 0.00 4.11
1769 2106 6.334378 TCACATTTATCAGGATTGGGGTTA 57.666 37.500 0.00 0.00 0.00 2.85
1770 2107 6.736581 TCACATTTATCAGGATTGGGGTTAA 58.263 36.000 0.00 0.00 0.00 2.01
1771 2108 7.185565 TCACATTTATCAGGATTGGGGTTAAA 58.814 34.615 0.00 0.00 0.00 1.52
1772 2109 7.843760 TCACATTTATCAGGATTGGGGTTAAAT 59.156 33.333 0.00 0.00 0.00 1.40
1773 2110 9.142014 CACATTTATCAGGATTGGGGTTAAATA 57.858 33.333 0.00 0.00 0.00 1.40
1774 2111 9.897040 ACATTTATCAGGATTGGGGTTAAATAT 57.103 29.630 0.00 0.00 0.00 1.28
1776 2113 8.950007 TTTATCAGGATTGGGGTTAAATATCC 57.050 34.615 0.00 0.00 35.97 2.59
1777 2114 5.333566 TCAGGATTGGGGTTAAATATCCC 57.666 43.478 0.00 0.00 42.73 3.85
1778 2115 4.988221 TCAGGATTGGGGTTAAATATCCCT 59.012 41.667 6.55 0.00 43.00 4.20
1779 2116 5.438386 TCAGGATTGGGGTTAAATATCCCTT 59.562 40.000 6.55 0.00 43.00 3.95
1780 2117 6.067901 TCAGGATTGGGGTTAAATATCCCTTT 60.068 38.462 6.55 0.00 43.00 3.11
1781 2118 7.131227 TCAGGATTGGGGTTAAATATCCCTTTA 59.869 37.037 6.55 0.00 43.00 1.85
1782 2119 7.787424 CAGGATTGGGGTTAAATATCCCTTTAA 59.213 37.037 6.55 2.02 43.00 1.52
1783 2120 8.528153 AGGATTGGGGTTAAATATCCCTTTAAT 58.472 33.333 6.55 5.68 43.00 1.40
1784 2121 9.831682 GGATTGGGGTTAAATATCCCTTTAATA 57.168 33.333 6.55 0.00 43.00 0.98
1800 2137 9.914834 TCCCTTTAATATGTAATGCACTAAAGT 57.085 29.630 0.00 0.00 31.69 2.66
1839 2176 8.045176 ACTCCATCTGTTTTTATTTAGTCTGC 57.955 34.615 0.00 0.00 0.00 4.26
1840 2177 7.072177 TCCATCTGTTTTTATTTAGTCTGCG 57.928 36.000 0.00 0.00 0.00 5.18
1841 2178 6.653320 TCCATCTGTTTTTATTTAGTCTGCGT 59.347 34.615 0.00 0.00 0.00 5.24
1842 2179 7.820386 TCCATCTGTTTTTATTTAGTCTGCGTA 59.180 33.333 0.00 0.00 0.00 4.42
1843 2180 8.612619 CCATCTGTTTTTATTTAGTCTGCGTAT 58.387 33.333 0.00 0.00 0.00 3.06
1844 2181 9.988350 CATCTGTTTTTATTTAGTCTGCGTATT 57.012 29.630 0.00 0.00 0.00 1.89
1858 2195 8.728088 AGTCTGCGTATTAATTTTGTTCAAAG 57.272 30.769 0.00 0.00 0.00 2.77
1859 2196 8.349983 AGTCTGCGTATTAATTTTGTTCAAAGT 58.650 29.630 0.00 0.00 0.00 2.66
1860 2197 8.627428 GTCTGCGTATTAATTTTGTTCAAAGTC 58.373 33.333 0.00 0.00 0.00 3.01
1861 2198 8.346300 TCTGCGTATTAATTTTGTTCAAAGTCA 58.654 29.630 0.00 0.00 0.00 3.41
1862 2199 8.858003 TGCGTATTAATTTTGTTCAAAGTCAA 57.142 26.923 0.00 0.00 0.00 3.18
1863 2200 8.963130 TGCGTATTAATTTTGTTCAAAGTCAAG 58.037 29.630 0.00 0.00 0.00 3.02
1864 2201 7.944649 GCGTATTAATTTTGTTCAAAGTCAAGC 59.055 33.333 0.00 0.00 0.00 4.01
1865 2202 9.180678 CGTATTAATTTTGTTCAAAGTCAAGCT 57.819 29.630 0.00 0.00 0.00 3.74
1879 2216 7.812309 AAAGTCAAGCTTTGTAAACTTTGAC 57.188 32.000 14.76 14.88 45.00 3.18
1880 2217 5.569413 AGTCAAGCTTTGTAAACTTTGACG 58.431 37.500 0.00 0.00 32.07 4.35
1881 2218 5.353123 AGTCAAGCTTTGTAAACTTTGACGA 59.647 36.000 0.00 0.00 32.07 4.20
1882 2219 6.025280 GTCAAGCTTTGTAAACTTTGACGAA 58.975 36.000 0.00 0.00 0.00 3.85
1883 2220 6.194692 GTCAAGCTTTGTAAACTTTGACGAAG 59.805 38.462 0.00 0.50 39.25 3.79
1932 2269 8.970691 ATGCAATAACAAATCAGTACTTTCAC 57.029 30.769 0.00 0.00 0.00 3.18
1933 2270 7.935520 TGCAATAACAAATCAGTACTTTCACA 58.064 30.769 0.00 0.00 0.00 3.58
1934 2271 8.575589 TGCAATAACAAATCAGTACTTTCACAT 58.424 29.630 0.00 0.00 0.00 3.21
1935 2272 9.410556 GCAATAACAAATCAGTACTTTCACATT 57.589 29.630 0.00 0.00 0.00 2.71
1969 2306 8.849168 TGTTATGATAAATGTTTATGCTGGAGG 58.151 33.333 2.90 0.00 33.72 4.30
1970 2307 5.772825 TGATAAATGTTTATGCTGGAGGC 57.227 39.130 2.90 0.00 42.22 4.70
1971 2308 5.448654 TGATAAATGTTTATGCTGGAGGCT 58.551 37.500 2.90 0.00 42.39 4.58
1972 2309 5.532406 TGATAAATGTTTATGCTGGAGGCTC 59.468 40.000 5.78 5.78 42.39 4.70
1973 2310 1.959042 ATGTTTATGCTGGAGGCTCG 58.041 50.000 8.69 0.00 42.39 5.03
1974 2311 0.613260 TGTTTATGCTGGAGGCTCGT 59.387 50.000 8.69 0.00 42.39 4.18
1975 2312 1.291132 GTTTATGCTGGAGGCTCGTC 58.709 55.000 8.69 0.37 42.39 4.20
1976 2313 0.901827 TTTATGCTGGAGGCTCGTCA 59.098 50.000 8.69 6.43 42.39 4.35
1977 2314 1.123077 TTATGCTGGAGGCTCGTCAT 58.877 50.000 8.69 13.03 42.39 3.06
1978 2315 0.390492 TATGCTGGAGGCTCGTCATG 59.610 55.000 18.67 5.98 42.39 3.07
1979 2316 2.202987 GCTGGAGGCTCGTCATGG 60.203 66.667 8.69 0.00 38.06 3.66
1980 2317 3.023949 GCTGGAGGCTCGTCATGGT 62.024 63.158 8.69 0.00 38.06 3.55
1981 2318 1.153489 CTGGAGGCTCGTCATGGTG 60.153 63.158 8.69 0.00 0.00 4.17
1982 2319 2.512515 GGAGGCTCGTCATGGTGC 60.513 66.667 8.69 0.00 0.00 5.01
1983 2320 2.512515 GAGGCTCGTCATGGTGCC 60.513 66.667 0.00 6.88 45.21 5.01
1984 2321 4.101448 AGGCTCGTCATGGTGCCC 62.101 66.667 10.33 0.00 45.94 5.36
1985 2322 4.408821 GGCTCGTCATGGTGCCCA 62.409 66.667 4.27 0.00 39.49 5.36
1986 2323 2.359850 GCTCGTCATGGTGCCCAA 60.360 61.111 0.00 0.00 36.95 4.12
1987 2324 2.401766 GCTCGTCATGGTGCCCAAG 61.402 63.158 0.00 0.00 36.95 3.61
1988 2325 2.359850 TCGTCATGGTGCCCAAGC 60.360 61.111 0.00 0.00 36.95 4.01
1989 2326 2.360350 CGTCATGGTGCCCAAGCT 60.360 61.111 0.00 0.00 36.95 3.74
1990 2327 2.693762 CGTCATGGTGCCCAAGCTG 61.694 63.158 0.00 0.00 36.95 4.24
1991 2328 2.677524 TCATGGTGCCCAAGCTGC 60.678 61.111 0.00 0.00 36.95 5.25
1992 2329 2.678934 CATGGTGCCCAAGCTGCT 60.679 61.111 0.00 0.00 36.95 4.24
1993 2330 2.118951 ATGGTGCCCAAGCTGCTT 59.881 55.556 9.53 9.53 36.95 3.91
1994 2331 1.534717 ATGGTGCCCAAGCTGCTTT 60.535 52.632 13.10 0.00 36.95 3.51
1995 2332 1.538687 ATGGTGCCCAAGCTGCTTTC 61.539 55.000 13.10 5.69 36.95 2.62
1996 2333 2.256461 GTGCCCAAGCTGCTTTCG 59.744 61.111 13.10 6.63 40.80 3.46
1997 2334 2.985282 TGCCCAAGCTGCTTTCGG 60.985 61.111 13.10 15.60 40.80 4.30
1998 2335 2.672996 GCCCAAGCTGCTTTCGGA 60.673 61.111 23.11 0.00 35.50 4.55
1999 2336 2.982744 GCCCAAGCTGCTTTCGGAC 61.983 63.158 23.11 8.91 35.50 4.79
2000 2337 2.680913 CCCAAGCTGCTTTCGGACG 61.681 63.158 13.10 0.00 0.00 4.79
2001 2338 2.174349 CAAGCTGCTTTCGGACGC 59.826 61.111 13.10 0.00 0.00 5.19
2002 2339 3.050275 AAGCTGCTTTCGGACGCC 61.050 61.111 9.53 0.00 0.00 5.68
2003 2340 3.537206 AAGCTGCTTTCGGACGCCT 62.537 57.895 9.53 0.00 0.00 5.52
2004 2341 3.491652 GCTGCTTTCGGACGCCTC 61.492 66.667 0.00 0.00 0.00 4.70
2005 2342 3.181967 CTGCTTTCGGACGCCTCG 61.182 66.667 0.00 0.00 0.00 4.63
2006 2343 3.916392 CTGCTTTCGGACGCCTCGT 62.916 63.158 0.00 0.00 45.10 4.18
2007 2344 2.737376 GCTTTCGGACGCCTCGTT 60.737 61.111 0.00 0.00 41.37 3.85
2008 2345 2.315386 GCTTTCGGACGCCTCGTTT 61.315 57.895 0.00 0.00 41.37 3.60
2009 2346 1.779683 CTTTCGGACGCCTCGTTTC 59.220 57.895 0.00 0.00 41.37 2.78
2010 2347 0.942410 CTTTCGGACGCCTCGTTTCA 60.942 55.000 0.00 0.00 41.37 2.69
2011 2348 0.320073 TTTCGGACGCCTCGTTTCAT 60.320 50.000 0.00 0.00 41.37 2.57
2012 2349 1.011968 TTCGGACGCCTCGTTTCATG 61.012 55.000 0.00 0.00 41.37 3.07
2013 2350 1.445410 CGGACGCCTCGTTTCATGA 60.445 57.895 0.00 0.00 41.37 3.07
2014 2351 1.683790 CGGACGCCTCGTTTCATGAC 61.684 60.000 0.00 0.00 41.37 3.06
2015 2352 0.389948 GGACGCCTCGTTTCATGACT 60.390 55.000 0.00 0.00 41.37 3.41
2016 2353 0.992802 GACGCCTCGTTTCATGACTC 59.007 55.000 0.00 0.00 41.37 3.36
2017 2354 0.732880 ACGCCTCGTTTCATGACTCG 60.733 55.000 11.10 11.10 36.35 4.18
2018 2355 1.710339 GCCTCGTTTCATGACTCGC 59.290 57.895 12.14 0.00 0.00 5.03
2019 2356 0.737715 GCCTCGTTTCATGACTCGCT 60.738 55.000 12.14 0.00 0.00 4.93
2020 2357 1.469251 GCCTCGTTTCATGACTCGCTA 60.469 52.381 12.14 0.00 0.00 4.26
2021 2358 2.455032 CCTCGTTTCATGACTCGCTAG 58.545 52.381 12.14 6.99 0.00 3.42
2022 2359 2.159366 CCTCGTTTCATGACTCGCTAGT 60.159 50.000 12.14 0.00 39.21 2.57
2031 2368 3.908737 ACTCGCTAGTCAACCCAAC 57.091 52.632 0.00 0.00 0.00 3.77
2032 2369 0.320697 ACTCGCTAGTCAACCCAACC 59.679 55.000 0.00 0.00 0.00 3.77
2033 2370 0.320374 CTCGCTAGTCAACCCAACCA 59.680 55.000 0.00 0.00 0.00 3.67
2034 2371 0.759959 TCGCTAGTCAACCCAACCAA 59.240 50.000 0.00 0.00 0.00 3.67
2035 2372 1.156736 CGCTAGTCAACCCAACCAAG 58.843 55.000 0.00 0.00 0.00 3.61
2036 2373 1.270625 CGCTAGTCAACCCAACCAAGA 60.271 52.381 0.00 0.00 0.00 3.02
2037 2374 2.615493 CGCTAGTCAACCCAACCAAGAT 60.615 50.000 0.00 0.00 0.00 2.40
2038 2375 3.369052 CGCTAGTCAACCCAACCAAGATA 60.369 47.826 0.00 0.00 0.00 1.98
2039 2376 4.585879 GCTAGTCAACCCAACCAAGATAA 58.414 43.478 0.00 0.00 0.00 1.75
2040 2377 4.636206 GCTAGTCAACCCAACCAAGATAAG 59.364 45.833 0.00 0.00 0.00 1.73
2041 2378 4.993705 AGTCAACCCAACCAAGATAAGA 57.006 40.909 0.00 0.00 0.00 2.10
2042 2379 5.520748 AGTCAACCCAACCAAGATAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
2043 2380 6.636454 AGTCAACCCAACCAAGATAAGATA 57.364 37.500 0.00 0.00 0.00 1.98
2044 2381 6.415573 AGTCAACCCAACCAAGATAAGATAC 58.584 40.000 0.00 0.00 0.00 2.24
2045 2382 5.293569 GTCAACCCAACCAAGATAAGATACG 59.706 44.000 0.00 0.00 0.00 3.06
2046 2383 5.046159 TCAACCCAACCAAGATAAGATACGT 60.046 40.000 0.00 0.00 0.00 3.57
2047 2384 5.019785 ACCCAACCAAGATAAGATACGTC 57.980 43.478 0.00 0.00 0.00 4.34
2048 2385 4.049186 CCCAACCAAGATAAGATACGTCG 58.951 47.826 0.00 0.00 0.00 5.12
2049 2386 3.489785 CCAACCAAGATAAGATACGTCGC 59.510 47.826 0.00 0.00 0.00 5.19
2050 2387 4.109766 CAACCAAGATAAGATACGTCGCA 58.890 43.478 0.00 0.00 0.00 5.10
2051 2388 4.585955 ACCAAGATAAGATACGTCGCAT 57.414 40.909 0.00 0.00 0.00 4.73
2052 2389 4.547532 ACCAAGATAAGATACGTCGCATC 58.452 43.478 0.00 0.00 0.00 3.91
2053 2390 4.037565 ACCAAGATAAGATACGTCGCATCA 59.962 41.667 8.14 0.00 0.00 3.07
2054 2391 5.164233 CCAAGATAAGATACGTCGCATCAT 58.836 41.667 8.14 0.00 0.00 2.45
2055 2392 5.287274 CCAAGATAAGATACGTCGCATCATC 59.713 44.000 8.14 3.51 0.00 2.92
2056 2393 4.653004 AGATAAGATACGTCGCATCATCG 58.347 43.478 8.14 0.00 0.00 3.84
2057 2394 2.051879 AAGATACGTCGCATCATCGG 57.948 50.000 8.14 0.00 0.00 4.18
2058 2395 0.952280 AGATACGTCGCATCATCGGT 59.048 50.000 8.14 0.00 0.00 4.69
2059 2396 1.053048 GATACGTCGCATCATCGGTG 58.947 55.000 0.00 0.00 0.00 4.94
2060 2397 0.666374 ATACGTCGCATCATCGGTGA 59.334 50.000 0.00 0.00 39.04 4.02
2061 2398 0.028902 TACGTCGCATCATCGGTGAG 59.971 55.000 3.97 0.00 37.87 3.51
2062 2399 2.580470 CGTCGCATCATCGGTGAGC 61.580 63.158 3.97 7.26 37.87 4.26
2063 2400 1.519234 GTCGCATCATCGGTGAGCA 60.519 57.895 16.68 5.16 37.87 4.26
2064 2401 1.227060 TCGCATCATCGGTGAGCAG 60.227 57.895 16.68 10.99 37.87 4.24
2079 2416 4.121691 CAGGATGCCTCGCTTCAG 57.878 61.111 2.48 0.00 34.94 3.02
2097 2434 2.588877 GCGGCGCCAGTCATGTAT 60.589 61.111 28.98 0.00 0.00 2.29
2099 2436 1.521457 CGGCGCCAGTCATGTATGT 60.521 57.895 28.98 0.00 0.00 2.29
2100 2437 1.089481 CGGCGCCAGTCATGTATGTT 61.089 55.000 28.98 0.00 0.00 2.71
2101 2438 1.804746 CGGCGCCAGTCATGTATGTTA 60.805 52.381 28.98 0.00 0.00 2.41
2102 2439 2.285083 GGCGCCAGTCATGTATGTTAA 58.715 47.619 24.80 0.00 0.00 2.01
2103 2440 2.878406 GGCGCCAGTCATGTATGTTAAT 59.122 45.455 24.80 0.00 0.00 1.40
2104 2441 3.303990 GGCGCCAGTCATGTATGTTAATG 60.304 47.826 24.80 0.00 0.00 1.90
2105 2442 3.312421 GCGCCAGTCATGTATGTTAATGT 59.688 43.478 0.00 0.00 0.00 2.71
2141 2691 8.443937 ACTAGTATTTTCTCTCATGAAAAACGC 58.556 33.333 6.04 3.47 45.30 4.84
2143 2693 7.820648 AGTATTTTCTCTCATGAAAAACGCAT 58.179 30.769 6.04 0.00 45.30 4.73
2144 2694 8.946085 AGTATTTTCTCTCATGAAAAACGCATA 58.054 29.630 6.04 0.00 45.30 3.14
2145 2695 9.554724 GTATTTTCTCTCATGAAAAACGCATAA 57.445 29.630 6.04 0.00 45.30 1.90
2146 2696 8.679288 ATTTTCTCTCATGAAAAACGCATAAG 57.321 30.769 6.04 0.00 45.30 1.73
2148 2698 6.653273 TCTCTCATGAAAAACGCATAAGAG 57.347 37.500 0.00 0.00 38.80 2.85
2149 2699 5.063944 TCTCTCATGAAAAACGCATAAGAGC 59.936 40.000 0.00 0.00 37.82 4.09
2158 2708 1.571460 GCATAAGAGCGATTGGGCG 59.429 57.895 0.00 0.00 38.18 6.13
2160 2710 1.598130 ATAAGAGCGATTGGGCGGC 60.598 57.895 0.00 0.00 38.18 6.53
2161 2711 2.324014 ATAAGAGCGATTGGGCGGCA 62.324 55.000 12.47 0.00 38.18 5.69
2166 2716 2.436646 CGATTGGGCGGCACTCTT 60.437 61.111 12.47 0.00 0.00 2.85
2168 2718 1.508088 GATTGGGCGGCACTCTTTG 59.492 57.895 12.47 0.00 0.00 2.77
2189 2753 0.392060 CCGGCCGCCTTAGTTTAAGT 60.392 55.000 22.85 0.00 33.96 2.24
2191 2755 2.199236 CGGCCGCCTTAGTTTAAGTAG 58.801 52.381 14.67 0.00 33.96 2.57
2196 2760 2.934553 CGCCTTAGTTTAAGTAGGGCAC 59.065 50.000 25.56 5.09 44.01 5.01
2239 2803 1.098050 CACAACATAAGCAGAGCCCC 58.902 55.000 0.00 0.00 0.00 5.80
2240 2804 0.698238 ACAACATAAGCAGAGCCCCA 59.302 50.000 0.00 0.00 0.00 4.96
2241 2805 1.075374 ACAACATAAGCAGAGCCCCAA 59.925 47.619 0.00 0.00 0.00 4.12
2311 2875 5.227908 ACCTGCACGTAGTATATATGTTGC 58.772 41.667 0.00 0.00 41.61 4.17
2324 3012 0.322816 ATGTTGCCACTCGATTGCCT 60.323 50.000 0.00 0.00 0.00 4.75
2356 3044 2.832129 ACATGGTATTCACTCTCGTGGT 59.168 45.455 0.00 0.00 41.53 4.16
2357 3045 4.021229 ACATGGTATTCACTCTCGTGGTA 58.979 43.478 0.00 0.00 41.53 3.25
2358 3046 4.649674 ACATGGTATTCACTCTCGTGGTAT 59.350 41.667 0.00 0.00 41.53 2.73
2359 3047 5.831525 ACATGGTATTCACTCTCGTGGTATA 59.168 40.000 0.00 0.00 41.53 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 158 9.926751 GAGTAAACTTGGTCAAACTTTACTAAC 57.073 33.333 17.31 9.20 35.80 2.34
304 305 5.049267 GTCCGTGTATTAGCTTTGGTCAAAA 60.049 40.000 0.00 0.00 0.00 2.44
365 366 3.204158 TGGTGGGGTCATGTAGCAATAAT 59.796 43.478 0.00 0.00 0.00 1.28
372 373 0.984230 AGTGTGGTGGGGTCATGTAG 59.016 55.000 0.00 0.00 0.00 2.74
388 389 6.090483 TCCTAGAGAGTTTGTGAAAGAGTG 57.910 41.667 0.00 0.00 0.00 3.51
402 403 5.906113 TTAACAGAAGTGCTCCTAGAGAG 57.094 43.478 0.00 0.00 46.29 3.20
471 472 9.671279 TGTCATATTTTGAGACAGACAATGTAT 57.329 29.630 0.00 0.00 44.17 2.29
472 473 8.935844 GTGTCATATTTTGAGACAGACAATGTA 58.064 33.333 0.00 0.00 45.56 2.29
473 474 7.810658 GTGTCATATTTTGAGACAGACAATGT 58.189 34.615 0.00 0.00 45.56 2.71
569 572 6.156949 AGGACAACAAGGTGATATAGACACAT 59.843 38.462 12.64 5.12 39.65 3.21
634 637 5.952947 TGTTTTGGTCCCTCAACTCTAAAAA 59.047 36.000 0.00 0.00 0.00 1.94
635 638 5.358725 GTGTTTTGGTCCCTCAACTCTAAAA 59.641 40.000 0.00 0.00 0.00 1.52
636 639 4.885325 GTGTTTTGGTCCCTCAACTCTAAA 59.115 41.667 0.00 0.00 0.00 1.85
637 640 4.080243 TGTGTTTTGGTCCCTCAACTCTAA 60.080 41.667 0.00 0.00 0.00 2.10
638 641 3.456644 TGTGTTTTGGTCCCTCAACTCTA 59.543 43.478 0.00 0.00 0.00 2.43
639 642 2.241176 TGTGTTTTGGTCCCTCAACTCT 59.759 45.455 0.00 0.00 0.00 3.24
640 643 2.618709 CTGTGTTTTGGTCCCTCAACTC 59.381 50.000 0.00 0.00 0.00 3.01
641 644 2.241176 TCTGTGTTTTGGTCCCTCAACT 59.759 45.455 0.00 0.00 0.00 3.16
642 645 2.357952 GTCTGTGTTTTGGTCCCTCAAC 59.642 50.000 0.00 0.00 0.00 3.18
643 646 2.241176 AGTCTGTGTTTTGGTCCCTCAA 59.759 45.455 0.00 0.00 0.00 3.02
644 647 1.843851 AGTCTGTGTTTTGGTCCCTCA 59.156 47.619 0.00 0.00 0.00 3.86
645 648 2.495084 GAGTCTGTGTTTTGGTCCCTC 58.505 52.381 0.00 0.00 0.00 4.30
646 649 1.202651 CGAGTCTGTGTTTTGGTCCCT 60.203 52.381 0.00 0.00 0.00 4.20
647 650 1.202604 TCGAGTCTGTGTTTTGGTCCC 60.203 52.381 0.00 0.00 0.00 4.46
648 651 2.135933 CTCGAGTCTGTGTTTTGGTCC 58.864 52.381 3.62 0.00 0.00 4.46
649 652 2.135933 CCTCGAGTCTGTGTTTTGGTC 58.864 52.381 12.31 0.00 0.00 4.02
650 653 1.202651 CCCTCGAGTCTGTGTTTTGGT 60.203 52.381 12.31 0.00 0.00 3.67
651 654 1.512926 CCCTCGAGTCTGTGTTTTGG 58.487 55.000 12.31 0.00 0.00 3.28
652 655 1.512926 CCCCTCGAGTCTGTGTTTTG 58.487 55.000 12.31 0.00 0.00 2.44
653 656 0.396811 CCCCCTCGAGTCTGTGTTTT 59.603 55.000 12.31 0.00 0.00 2.43
654 657 2.058675 CCCCCTCGAGTCTGTGTTT 58.941 57.895 12.31 0.00 0.00 2.83
655 658 3.793060 CCCCCTCGAGTCTGTGTT 58.207 61.111 12.31 0.00 0.00 3.32
670 673 2.711547 AGTCTAGTATGATTTGGCCCCC 59.288 50.000 0.00 0.00 0.00 5.40
671 674 4.439253 AAGTCTAGTATGATTTGGCCCC 57.561 45.455 0.00 0.00 0.00 5.80
672 675 8.352942 CAATTAAAGTCTAGTATGATTTGGCCC 58.647 37.037 0.00 0.00 0.00 5.80
673 676 8.903820 ACAATTAAAGTCTAGTATGATTTGGCC 58.096 33.333 0.00 0.00 0.00 5.36
674 677 9.937175 GACAATTAAAGTCTAGTATGATTTGGC 57.063 33.333 4.64 0.00 33.29 4.52
750 973 2.818432 TCCTCCTCAACTTAGACACGTC 59.182 50.000 0.00 0.00 0.00 4.34
875 1098 3.779759 TCTTTGTTTCACGCAAGCAAAT 58.220 36.364 9.26 0.00 42.36 2.32
910 1137 1.531578 CGACGATCGATTGGAGCTAGA 59.468 52.381 24.34 0.00 43.74 2.43
915 1142 0.303796 TCGACGACGATCGATTGGAG 59.696 55.000 24.34 11.91 45.84 3.86
942 1169 4.331717 GTGTCTTTGTTTCTTCTCACCGAA 59.668 41.667 0.00 0.00 0.00 4.30
943 1170 3.869246 GTGTCTTTGTTTCTTCTCACCGA 59.131 43.478 0.00 0.00 0.00 4.69
945 1172 3.546218 GCGTGTCTTTGTTTCTTCTCACC 60.546 47.826 0.00 0.00 0.00 4.02
946 1173 3.063452 TGCGTGTCTTTGTTTCTTCTCAC 59.937 43.478 0.00 0.00 0.00 3.51
947 1174 3.266636 TGCGTGTCTTTGTTTCTTCTCA 58.733 40.909 0.00 0.00 0.00 3.27
948 1175 3.303395 CCTGCGTGTCTTTGTTTCTTCTC 60.303 47.826 0.00 0.00 0.00 2.87
950 1177 2.287009 CCCTGCGTGTCTTTGTTTCTTC 60.287 50.000 0.00 0.00 0.00 2.87
951 1178 1.676006 CCCTGCGTGTCTTTGTTTCTT 59.324 47.619 0.00 0.00 0.00 2.52
952 1179 1.308998 CCCTGCGTGTCTTTGTTTCT 58.691 50.000 0.00 0.00 0.00 2.52
953 1180 0.317854 GCCCTGCGTGTCTTTGTTTC 60.318 55.000 0.00 0.00 0.00 2.78
987 1225 1.216427 GATGCCATCCCTTCCTTTCCT 59.784 52.381 0.00 0.00 0.00 3.36
989 1227 1.312815 CGATGCCATCCCTTCCTTTC 58.687 55.000 0.00 0.00 0.00 2.62
1044 1294 4.934602 CACTTGGTCTTGAAGATCTTCTCC 59.065 45.833 30.45 25.04 40.14 3.71
1161 1488 2.412112 GCGGTGGAGTAGGCGTAG 59.588 66.667 0.00 0.00 0.00 3.51
1164 1491 4.077184 TTGGCGGTGGAGTAGGCG 62.077 66.667 0.00 0.00 0.00 5.52
1271 1608 8.461222 AGCAATTGTAAGAAATGATCGATGAAA 58.539 29.630 0.54 0.00 0.00 2.69
1288 1625 5.948758 TCCATCCATGTTGTTAGCAATTGTA 59.051 36.000 7.40 0.00 36.92 2.41
1323 1660 1.241165 TGCCAATGCATCGATCCATC 58.759 50.000 1.44 0.00 44.23 3.51
1334 1671 0.748450 ATGTACTGCCATGCCAATGC 59.252 50.000 0.00 0.00 38.26 3.56
1335 1672 1.338973 GGATGTACTGCCATGCCAATG 59.661 52.381 0.00 0.00 0.00 2.82
1336 1673 1.696063 GGATGTACTGCCATGCCAAT 58.304 50.000 0.00 0.00 0.00 3.16
1337 1674 3.189568 GGATGTACTGCCATGCCAA 57.810 52.632 0.00 0.00 0.00 4.52
1338 1675 4.984194 GGATGTACTGCCATGCCA 57.016 55.556 0.00 0.00 0.00 4.92
1339 1676 4.164258 GGGATGTACTGCCATGCC 57.836 61.111 6.86 3.36 44.56 4.40
1340 1677 0.820891 CCAGGGATGTACTGCCATGC 60.821 60.000 11.94 0.00 37.96 4.06
1451 1788 7.285566 TGATGGAATTAGGAGAAGAATGAAGG 58.714 38.462 0.00 0.00 0.00 3.46
1455 1792 8.155510 TGAGATGATGGAATTAGGAGAAGAATG 58.844 37.037 0.00 0.00 0.00 2.67
1463 1800 6.385176 ACTTGACTGAGATGATGGAATTAGGA 59.615 38.462 0.00 0.00 0.00 2.94
1464 1801 6.590068 ACTTGACTGAGATGATGGAATTAGG 58.410 40.000 0.00 0.00 0.00 2.69
1465 1802 8.200120 TGTACTTGACTGAGATGATGGAATTAG 58.800 37.037 0.00 0.00 0.00 1.73
1466 1803 8.078060 TGTACTTGACTGAGATGATGGAATTA 57.922 34.615 0.00 0.00 0.00 1.40
1467 1804 6.950842 TGTACTTGACTGAGATGATGGAATT 58.049 36.000 0.00 0.00 0.00 2.17
1468 1805 6.155910 ACTGTACTTGACTGAGATGATGGAAT 59.844 38.462 0.00 0.00 0.00 3.01
1482 1819 1.725164 GCTTGCGGTACTGTACTTGAC 59.275 52.381 16.79 5.73 0.00 3.18
1483 1820 1.341852 TGCTTGCGGTACTGTACTTGA 59.658 47.619 16.79 0.00 0.00 3.02
1484 1821 1.790755 TGCTTGCGGTACTGTACTTG 58.209 50.000 16.79 11.12 0.00 3.16
1485 1822 2.536761 TTGCTTGCGGTACTGTACTT 57.463 45.000 16.79 0.00 0.00 2.24
1486 1823 2.140717 GTTTGCTTGCGGTACTGTACT 58.859 47.619 16.79 0.00 0.00 2.73
1487 1824 1.868498 TGTTTGCTTGCGGTACTGTAC 59.132 47.619 9.46 9.46 0.00 2.90
1488 1825 2.242047 TGTTTGCTTGCGGTACTGTA 57.758 45.000 3.10 0.00 0.00 2.74
1489 1826 1.333619 CTTGTTTGCTTGCGGTACTGT 59.666 47.619 3.10 0.00 0.00 3.55
1490 1827 1.601903 TCTTGTTTGCTTGCGGTACTG 59.398 47.619 0.00 0.00 0.00 2.74
1499 1836 6.190954 ACGTTAGTTTCTTCTTGTTTGCTT 57.809 33.333 0.00 0.00 0.00 3.91
1500 1837 5.813080 ACGTTAGTTTCTTCTTGTTTGCT 57.187 34.783 0.00 0.00 0.00 3.91
1526 1863 7.509141 TGTGTGTGGCAATCTTATATATTGG 57.491 36.000 0.00 0.00 35.34 3.16
1529 1866 9.658799 GAGTATGTGTGTGGCAATCTTATATAT 57.341 33.333 0.00 0.00 0.00 0.86
1530 1867 8.094548 GGAGTATGTGTGTGGCAATCTTATATA 58.905 37.037 0.00 0.00 0.00 0.86
1531 1868 6.936900 GGAGTATGTGTGTGGCAATCTTATAT 59.063 38.462 0.00 0.00 0.00 0.86
1532 1869 6.126911 TGGAGTATGTGTGTGGCAATCTTATA 60.127 38.462 0.00 0.00 0.00 0.98
1533 1870 5.126067 GGAGTATGTGTGTGGCAATCTTAT 58.874 41.667 0.00 0.00 0.00 1.73
1534 1871 4.019771 TGGAGTATGTGTGTGGCAATCTTA 60.020 41.667 0.00 0.00 0.00 2.10
1535 1872 3.244875 TGGAGTATGTGTGTGGCAATCTT 60.245 43.478 0.00 0.00 0.00 2.40
1536 1873 2.305635 TGGAGTATGTGTGTGGCAATCT 59.694 45.455 0.00 0.00 0.00 2.40
1537 1874 2.710377 TGGAGTATGTGTGTGGCAATC 58.290 47.619 0.00 0.00 0.00 2.67
1538 1875 2.877097 TGGAGTATGTGTGTGGCAAT 57.123 45.000 0.00 0.00 0.00 3.56
1539 1876 2.877097 ATGGAGTATGTGTGTGGCAA 57.123 45.000 0.00 0.00 0.00 4.52
1540 1877 3.807553 CATATGGAGTATGTGTGTGGCA 58.192 45.455 0.00 0.00 36.28 4.92
1552 1889 9.877178 GCTAGCTATAATTACAACATATGGAGT 57.123 33.333 7.70 7.54 0.00 3.85
1555 1892 9.319143 GGAGCTAGCTATAATTACAACATATGG 57.681 37.037 19.38 0.00 0.00 2.74
1556 1893 9.025020 CGGAGCTAGCTATAATTACAACATATG 57.975 37.037 19.38 0.00 0.00 1.78
1557 1894 8.198109 CCGGAGCTAGCTATAATTACAACATAT 58.802 37.037 19.38 0.00 0.00 1.78
1558 1895 7.544622 CCGGAGCTAGCTATAATTACAACATA 58.455 38.462 19.38 0.00 0.00 2.29
1559 1896 6.398918 CCGGAGCTAGCTATAATTACAACAT 58.601 40.000 19.38 0.00 0.00 2.71
1560 1897 5.779922 CCGGAGCTAGCTATAATTACAACA 58.220 41.667 19.38 0.00 0.00 3.33
1561 1898 4.626172 GCCGGAGCTAGCTATAATTACAAC 59.374 45.833 19.38 0.19 35.50 3.32
1562 1899 4.322499 GGCCGGAGCTAGCTATAATTACAA 60.322 45.833 19.38 0.00 39.73 2.41
1563 1900 3.194968 GGCCGGAGCTAGCTATAATTACA 59.805 47.826 19.38 0.00 39.73 2.41
1564 1901 3.734293 CGGCCGGAGCTAGCTATAATTAC 60.734 52.174 19.38 2.65 39.73 1.89
1565 1902 2.426024 CGGCCGGAGCTAGCTATAATTA 59.574 50.000 19.38 0.00 39.73 1.40
1566 1903 1.204941 CGGCCGGAGCTAGCTATAATT 59.795 52.381 19.38 0.00 39.73 1.40
1567 1904 0.818296 CGGCCGGAGCTAGCTATAAT 59.182 55.000 19.38 0.00 39.73 1.28
1568 1905 1.248785 CCGGCCGGAGCTAGCTATAA 61.249 60.000 41.82 0.00 39.73 0.98
1569 1906 1.677966 CCGGCCGGAGCTAGCTATA 60.678 63.158 41.82 0.00 39.73 1.31
1570 1907 2.992114 CCGGCCGGAGCTAGCTAT 60.992 66.667 41.82 0.00 39.73 2.97
1575 1912 4.926162 TATGCCCGGCCGGAGCTA 62.926 66.667 45.44 30.73 39.73 3.32
1578 1915 1.899437 ATACATATGCCCGGCCGGAG 61.899 60.000 45.44 33.31 37.50 4.63
1579 1916 0.615261 TATACATATGCCCGGCCGGA 60.615 55.000 45.44 27.87 37.50 5.14
1580 1917 0.179084 CTATACATATGCCCGGCCGG 60.179 60.000 37.99 37.99 0.00 6.13
1581 1918 0.810031 GCTATACATATGCCCGGCCG 60.810 60.000 21.04 21.04 0.00 6.13
1582 1919 0.541863 AGCTATACATATGCCCGGCC 59.458 55.000 7.03 0.00 0.00 6.13
1583 1920 2.803492 GCTAGCTATACATATGCCCGGC 60.803 54.545 7.70 1.04 0.00 6.13
1584 1921 2.695666 AGCTAGCTATACATATGCCCGG 59.304 50.000 17.69 0.00 0.00 5.73
1585 1922 4.557695 GCTAGCTAGCTATACATATGCCCG 60.558 50.000 33.71 9.52 45.62 6.13
1586 1923 4.877282 GCTAGCTAGCTATACATATGCCC 58.123 47.826 33.71 4.16 45.62 5.36
1599 1936 4.742027 AGCATGCAGACAGCTAGCTAGC 62.742 54.545 33.96 33.96 46.78 3.42
1600 1937 1.068895 AGCATGCAGACAGCTAGCTAG 59.931 52.381 18.86 16.84 46.78 3.42
1601 1938 1.117994 AGCATGCAGACAGCTAGCTA 58.882 50.000 18.86 0.00 46.78 3.32
1602 1939 1.906253 AGCATGCAGACAGCTAGCT 59.094 52.632 21.98 12.68 44.94 3.32
1603 1940 2.015382 CAGCATGCAGACAGCTAGC 58.985 57.895 21.98 6.62 45.94 3.42
1625 1962 9.073368 CGTACATAAACATATGGAGTATACTGC 57.927 37.037 16.85 16.85 34.66 4.40
1632 1969 9.999009 CGTATATCGTACATAAACATATGGAGT 57.001 33.333 7.80 0.86 34.52 3.85
1650 1987 9.221775 TCGATGAATGAATCAATACGTATATCG 57.778 33.333 17.55 17.55 42.54 2.92
1654 1991 8.986477 TCATCGATGAATGAATCAATACGTAT 57.014 30.769 25.44 1.14 42.54 3.06
1655 1992 7.062255 GCTCATCGATGAATGAATCAATACGTA 59.938 37.037 27.09 0.00 42.54 3.57
1656 1993 6.128715 GCTCATCGATGAATGAATCAATACGT 60.129 38.462 27.09 0.00 42.54 3.57
1657 1994 6.128742 TGCTCATCGATGAATGAATCAATACG 60.129 38.462 27.09 12.70 42.54 3.06
1658 1995 7.014115 GTGCTCATCGATGAATGAATCAATAC 58.986 38.462 27.09 10.93 42.54 1.89
1659 1996 6.128742 CGTGCTCATCGATGAATGAATCAATA 60.129 38.462 27.09 2.42 42.54 1.90
1660 1997 5.333875 CGTGCTCATCGATGAATGAATCAAT 60.334 40.000 27.09 0.00 42.54 2.57
1661 1998 4.025480 CGTGCTCATCGATGAATGAATCAA 60.025 41.667 27.09 3.66 42.54 2.57
1662 1999 3.492011 CGTGCTCATCGATGAATGAATCA 59.508 43.478 27.09 15.09 43.67 2.57
1663 2000 3.492383 ACGTGCTCATCGATGAATGAATC 59.508 43.478 27.09 13.74 35.32 2.52
1664 2001 3.246936 CACGTGCTCATCGATGAATGAAT 59.753 43.478 27.09 11.62 35.32 2.57
1665 2002 2.604462 CACGTGCTCATCGATGAATGAA 59.396 45.455 27.09 10.22 35.32 2.57
1666 2003 2.195922 CACGTGCTCATCGATGAATGA 58.804 47.619 27.09 12.22 36.18 2.57
1667 2004 1.929169 ACACGTGCTCATCGATGAATG 59.071 47.619 27.09 20.43 36.18 2.67
1668 2005 2.196749 GACACGTGCTCATCGATGAAT 58.803 47.619 27.09 9.30 36.18 2.57
1669 2006 1.629013 GACACGTGCTCATCGATGAA 58.371 50.000 27.09 12.37 36.18 2.57
1670 2007 0.179137 GGACACGTGCTCATCGATGA 60.179 55.000 25.80 25.80 35.16 2.92
1671 2008 0.458370 TGGACACGTGCTCATCGATG 60.458 55.000 19.61 19.61 0.00 3.84
1672 2009 0.461548 ATGGACACGTGCTCATCGAT 59.538 50.000 17.22 5.51 0.00 3.59
1673 2010 0.458370 CATGGACACGTGCTCATCGA 60.458 55.000 17.22 3.01 0.00 3.59
1674 2011 0.737367 ACATGGACACGTGCTCATCG 60.737 55.000 17.22 14.85 37.10 3.84
1675 2012 2.293677 TACATGGACACGTGCTCATC 57.706 50.000 17.22 5.30 37.10 2.92
1676 2013 2.760634 TTACATGGACACGTGCTCAT 57.239 45.000 17.22 16.25 37.10 2.90
1677 2014 2.760634 ATTACATGGACACGTGCTCA 57.239 45.000 17.22 14.57 37.10 4.26
1678 2015 5.539582 TTTAATTACATGGACACGTGCTC 57.460 39.130 17.22 12.21 37.10 4.26
1679 2016 5.950758 TTTTAATTACATGGACACGTGCT 57.049 34.783 17.22 2.46 37.10 4.40
1680 2017 5.514914 CCATTTTAATTACATGGACACGTGC 59.485 40.000 17.22 8.51 40.10 5.34
1681 2018 6.616947 ACCATTTTAATTACATGGACACGTG 58.383 36.000 22.10 15.48 40.10 4.49
1682 2019 6.827586 ACCATTTTAATTACATGGACACGT 57.172 33.333 22.10 4.38 40.10 4.49
1683 2020 7.860373 CCATACCATTTTAATTACATGGACACG 59.140 37.037 22.10 11.44 40.10 4.49
1684 2021 8.691797 ACCATACCATTTTAATTACATGGACAC 58.308 33.333 22.10 0.00 40.10 3.67
1685 2022 8.690884 CACCATACCATTTTAATTACATGGACA 58.309 33.333 22.10 13.24 40.10 4.02
1686 2023 8.141268 CCACCATACCATTTTAATTACATGGAC 58.859 37.037 22.10 0.00 40.10 4.02
1687 2024 7.841729 ACCACCATACCATTTTAATTACATGGA 59.158 33.333 22.10 11.11 40.10 3.41
1688 2025 8.017418 ACCACCATACCATTTTAATTACATGG 57.983 34.615 16.63 16.63 42.92 3.66
1689 2026 8.690884 TGACCACCATACCATTTTAATTACATG 58.309 33.333 0.00 0.00 0.00 3.21
1690 2027 8.830915 TGACCACCATACCATTTTAATTACAT 57.169 30.769 0.00 0.00 0.00 2.29
1691 2028 8.651589 TTGACCACCATACCATTTTAATTACA 57.348 30.769 0.00 0.00 0.00 2.41
1692 2029 8.745590 ACTTGACCACCATACCATTTTAATTAC 58.254 33.333 0.00 0.00 0.00 1.89
1693 2030 8.887264 ACTTGACCACCATACCATTTTAATTA 57.113 30.769 0.00 0.00 0.00 1.40
1694 2031 7.790782 ACTTGACCACCATACCATTTTAATT 57.209 32.000 0.00 0.00 0.00 1.40
1695 2032 7.453126 TCAACTTGACCACCATACCATTTTAAT 59.547 33.333 0.00 0.00 0.00 1.40
1696 2033 6.778069 TCAACTTGACCACCATACCATTTTAA 59.222 34.615 0.00 0.00 0.00 1.52
1697 2034 6.207810 GTCAACTTGACCACCATACCATTTTA 59.792 38.462 10.42 0.00 41.37 1.52
1698 2035 5.010617 GTCAACTTGACCACCATACCATTTT 59.989 40.000 10.42 0.00 41.37 1.82
1699 2036 4.522789 GTCAACTTGACCACCATACCATTT 59.477 41.667 10.42 0.00 41.37 2.32
1700 2037 4.079253 GTCAACTTGACCACCATACCATT 58.921 43.478 10.42 0.00 41.37 3.16
1701 2038 3.686016 GTCAACTTGACCACCATACCAT 58.314 45.455 10.42 0.00 41.37 3.55
1702 2039 3.134574 GTCAACTTGACCACCATACCA 57.865 47.619 10.42 0.00 41.37 3.25
1712 2049 7.923414 AGTAGATAAAATGGGTCAACTTGAC 57.077 36.000 12.81 12.81 46.23 3.18
1713 2050 8.934023 AAAGTAGATAAAATGGGTCAACTTGA 57.066 30.769 0.00 0.00 0.00 3.02
1714 2051 9.981114 AAAAAGTAGATAAAATGGGTCAACTTG 57.019 29.630 0.00 0.00 0.00 3.16
1739 2076 7.093377 CCCAATCCTGATAAATGTGAGGAAAAA 60.093 37.037 0.00 0.00 38.13 1.94
1740 2077 6.380846 CCCAATCCTGATAAATGTGAGGAAAA 59.619 38.462 0.00 0.00 38.13 2.29
1741 2078 5.893255 CCCAATCCTGATAAATGTGAGGAAA 59.107 40.000 0.00 0.00 38.13 3.13
1742 2079 5.448654 CCCAATCCTGATAAATGTGAGGAA 58.551 41.667 0.00 0.00 38.13 3.36
1743 2080 4.141181 CCCCAATCCTGATAAATGTGAGGA 60.141 45.833 0.00 0.00 38.97 3.71
1744 2081 4.147321 CCCCAATCCTGATAAATGTGAGG 58.853 47.826 0.00 0.00 0.00 3.86
1745 2082 4.796606 ACCCCAATCCTGATAAATGTGAG 58.203 43.478 0.00 0.00 0.00 3.51
1746 2083 4.879295 ACCCCAATCCTGATAAATGTGA 57.121 40.909 0.00 0.00 0.00 3.58
1747 2084 7.416964 TTTAACCCCAATCCTGATAAATGTG 57.583 36.000 0.00 0.00 0.00 3.21
1748 2085 9.897040 ATATTTAACCCCAATCCTGATAAATGT 57.103 29.630 0.00 0.00 0.00 2.71
1750 2087 9.547279 GGATATTTAACCCCAATCCTGATAAAT 57.453 33.333 0.00 0.00 34.51 1.40
1751 2088 7.953493 GGGATATTTAACCCCAATCCTGATAAA 59.047 37.037 0.00 0.00 40.19 1.40
1752 2089 7.299520 AGGGATATTTAACCCCAATCCTGATAA 59.700 37.037 0.00 0.00 46.64 1.75
1753 2090 6.802660 AGGGATATTTAACCCCAATCCTGATA 59.197 38.462 0.00 0.00 46.64 2.15
1754 2091 5.621329 AGGGATATTTAACCCCAATCCTGAT 59.379 40.000 0.00 0.00 46.64 2.90
1755 2092 4.988221 AGGGATATTTAACCCCAATCCTGA 59.012 41.667 0.00 0.00 46.64 3.86
1756 2093 5.339423 AGGGATATTTAACCCCAATCCTG 57.661 43.478 0.00 0.00 46.64 3.86
1757 2094 6.369927 AAAGGGATATTTAACCCCAATCCT 57.630 37.500 0.00 0.00 46.64 3.24
1758 2095 8.736097 ATTAAAGGGATATTTAACCCCAATCC 57.264 34.615 0.00 0.00 46.64 3.01
1774 2111 9.914834 ACTTTAGTGCATTACATATTAAAGGGA 57.085 29.630 0.00 0.00 35.75 4.20
1813 2150 9.162764 GCAGACTAAATAAAAACAGATGGAGTA 57.837 33.333 0.00 0.00 0.00 2.59
1814 2151 7.148407 CGCAGACTAAATAAAAACAGATGGAGT 60.148 37.037 0.00 0.00 0.00 3.85
1815 2152 7.148407 ACGCAGACTAAATAAAAACAGATGGAG 60.148 37.037 0.00 0.00 0.00 3.86
1816 2153 6.653320 ACGCAGACTAAATAAAAACAGATGGA 59.347 34.615 0.00 0.00 0.00 3.41
1817 2154 6.842163 ACGCAGACTAAATAAAAACAGATGG 58.158 36.000 0.00 0.00 0.00 3.51
1818 2155 9.988350 AATACGCAGACTAAATAAAAACAGATG 57.012 29.630 0.00 0.00 0.00 2.90
1832 2169 9.820229 CTTTGAACAAAATTAATACGCAGACTA 57.180 29.630 1.76 0.00 0.00 2.59
1833 2170 8.349983 ACTTTGAACAAAATTAATACGCAGACT 58.650 29.630 1.76 0.00 0.00 3.24
1834 2171 8.502161 ACTTTGAACAAAATTAATACGCAGAC 57.498 30.769 1.76 0.00 0.00 3.51
1835 2172 8.346300 TGACTTTGAACAAAATTAATACGCAGA 58.654 29.630 1.76 0.00 0.00 4.26
1836 2173 8.500837 TGACTTTGAACAAAATTAATACGCAG 57.499 30.769 1.76 0.00 0.00 5.18
1837 2174 8.858003 TTGACTTTGAACAAAATTAATACGCA 57.142 26.923 1.76 0.00 0.00 5.24
1838 2175 7.944649 GCTTGACTTTGAACAAAATTAATACGC 59.055 33.333 1.76 0.00 0.00 4.42
1839 2176 9.180678 AGCTTGACTTTGAACAAAATTAATACG 57.819 29.630 1.76 0.00 0.00 3.06
1856 2193 6.027749 CGTCAAAGTTTACAAAGCTTGACTT 58.972 36.000 17.89 3.36 41.70 3.01
1857 2194 5.353123 TCGTCAAAGTTTACAAAGCTTGACT 59.647 36.000 17.89 0.00 37.92 3.41
1858 2195 5.565695 TCGTCAAAGTTTACAAAGCTTGAC 58.434 37.500 0.00 13.74 37.34 3.18
1859 2196 5.804692 TCGTCAAAGTTTACAAAGCTTGA 57.195 34.783 0.00 0.00 0.00 3.02
1860 2197 6.027749 ACTTCGTCAAAGTTTACAAAGCTTG 58.972 36.000 0.00 0.00 46.26 4.01
1861 2198 6.190954 ACTTCGTCAAAGTTTACAAAGCTT 57.809 33.333 0.00 0.00 46.26 3.74
1862 2199 5.813080 ACTTCGTCAAAGTTTACAAAGCT 57.187 34.783 0.00 0.00 46.26 3.74
1907 2244 8.575589 TGTGAAAGTACTGATTTGTTATTGCAT 58.424 29.630 0.00 0.00 0.00 3.96
1908 2245 7.935520 TGTGAAAGTACTGATTTGTTATTGCA 58.064 30.769 0.00 0.00 0.00 4.08
1909 2246 8.970691 ATGTGAAAGTACTGATTTGTTATTGC 57.029 30.769 0.00 0.00 0.00 3.56
1943 2280 8.849168 CCTCCAGCATAAACATTTATCATAACA 58.151 33.333 0.00 0.00 31.28 2.41
1944 2281 7.809806 GCCTCCAGCATAAACATTTATCATAAC 59.190 37.037 0.00 0.00 42.97 1.89
1945 2282 7.885297 GCCTCCAGCATAAACATTTATCATAA 58.115 34.615 0.00 0.00 42.97 1.90
1946 2283 7.452880 GCCTCCAGCATAAACATTTATCATA 57.547 36.000 0.00 0.00 42.97 2.15
1947 2284 6.336842 GCCTCCAGCATAAACATTTATCAT 57.663 37.500 0.00 0.00 42.97 2.45
1948 2285 5.772825 GCCTCCAGCATAAACATTTATCA 57.227 39.130 0.00 0.00 42.97 2.15
1962 2299 2.202987 CCATGACGAGCCTCCAGC 60.203 66.667 0.00 0.00 44.25 4.85
1963 2300 1.153489 CACCATGACGAGCCTCCAG 60.153 63.158 0.00 0.00 0.00 3.86
1964 2301 2.981302 CACCATGACGAGCCTCCA 59.019 61.111 0.00 0.00 0.00 3.86
1965 2302 2.512515 GCACCATGACGAGCCTCC 60.513 66.667 0.00 0.00 0.00 4.30
1966 2303 2.512515 GGCACCATGACGAGCCTC 60.513 66.667 0.00 0.00 43.70 4.70
1979 2316 2.256461 CGAAAGCAGCTTGGGCAC 59.744 61.111 8.88 0.00 41.70 5.01
1980 2317 2.985282 CCGAAAGCAGCTTGGGCA 60.985 61.111 8.88 0.00 41.70 5.36
1981 2318 2.672996 TCCGAAAGCAGCTTGGGC 60.673 61.111 8.88 0.53 39.06 5.36
1982 2319 2.680913 CGTCCGAAAGCAGCTTGGG 61.681 63.158 8.88 13.45 0.00 4.12
1983 2320 2.863153 CGTCCGAAAGCAGCTTGG 59.137 61.111 8.88 6.81 0.00 3.61
1984 2321 2.174349 GCGTCCGAAAGCAGCTTG 59.826 61.111 8.88 0.00 0.00 4.01
1985 2322 3.050275 GGCGTCCGAAAGCAGCTT 61.050 61.111 0.21 0.21 34.54 3.74
1986 2323 3.941657 GAGGCGTCCGAAAGCAGCT 62.942 63.158 0.00 0.00 34.54 4.24
1987 2324 3.491652 GAGGCGTCCGAAAGCAGC 61.492 66.667 0.00 0.00 34.54 5.25
1988 2325 3.181967 CGAGGCGTCCGAAAGCAG 61.182 66.667 0.00 0.00 34.54 4.24
1989 2326 2.981977 AAACGAGGCGTCCGAAAGCA 62.982 55.000 4.93 0.00 39.99 3.91
1990 2327 2.224205 GAAACGAGGCGTCCGAAAGC 62.224 60.000 4.93 0.00 39.99 3.51
1991 2328 0.942410 TGAAACGAGGCGTCCGAAAG 60.942 55.000 4.93 0.00 39.99 2.62
1992 2329 0.320073 ATGAAACGAGGCGTCCGAAA 60.320 50.000 4.93 0.00 39.99 3.46
1993 2330 1.011968 CATGAAACGAGGCGTCCGAA 61.012 55.000 4.93 0.00 39.99 4.30
1994 2331 1.445410 CATGAAACGAGGCGTCCGA 60.445 57.895 4.93 0.00 39.99 4.55
1995 2332 1.445410 TCATGAAACGAGGCGTCCG 60.445 57.895 0.00 0.00 39.99 4.79
1996 2333 0.389948 AGTCATGAAACGAGGCGTCC 60.390 55.000 0.00 0.00 39.99 4.79
1997 2334 0.992802 GAGTCATGAAACGAGGCGTC 59.007 55.000 0.00 0.00 39.99 5.19
1998 2335 0.732880 CGAGTCATGAAACGAGGCGT 60.733 55.000 14.82 0.00 43.97 5.68
1999 2336 1.991430 CGAGTCATGAAACGAGGCG 59.009 57.895 14.82 0.00 0.00 5.52
2000 2337 0.737715 AGCGAGTCATGAAACGAGGC 60.738 55.000 21.39 9.70 0.00 4.70
2001 2338 2.159366 ACTAGCGAGTCATGAAACGAGG 60.159 50.000 21.39 13.75 0.00 4.63
2002 2339 3.138205 ACTAGCGAGTCATGAAACGAG 57.862 47.619 21.39 14.62 0.00 4.18
2013 2350 0.320697 GGTTGGGTTGACTAGCGAGT 59.679 55.000 0.00 0.00 39.20 4.18
2014 2351 0.320374 TGGTTGGGTTGACTAGCGAG 59.680 55.000 0.00 0.00 0.00 5.03
2015 2352 0.759959 TTGGTTGGGTTGACTAGCGA 59.240 50.000 0.00 0.00 0.00 4.93
2016 2353 1.156736 CTTGGTTGGGTTGACTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
2017 2354 2.561478 TCTTGGTTGGGTTGACTAGC 57.439 50.000 0.00 0.00 0.00 3.42
2018 2355 6.049955 TCTTATCTTGGTTGGGTTGACTAG 57.950 41.667 0.00 0.00 0.00 2.57
2019 2356 6.636454 ATCTTATCTTGGTTGGGTTGACTA 57.364 37.500 0.00 0.00 0.00 2.59
2020 2357 4.993705 TCTTATCTTGGTTGGGTTGACT 57.006 40.909 0.00 0.00 0.00 3.41
2021 2358 5.293569 CGTATCTTATCTTGGTTGGGTTGAC 59.706 44.000 0.00 0.00 0.00 3.18
2022 2359 5.046159 ACGTATCTTATCTTGGTTGGGTTGA 60.046 40.000 0.00 0.00 0.00 3.18
2023 2360 5.183228 ACGTATCTTATCTTGGTTGGGTTG 58.817 41.667 0.00 0.00 0.00 3.77
2024 2361 5.425630 GACGTATCTTATCTTGGTTGGGTT 58.574 41.667 0.00 0.00 0.00 4.11
2025 2362 4.441079 CGACGTATCTTATCTTGGTTGGGT 60.441 45.833 0.00 0.00 0.00 4.51
2026 2363 4.049186 CGACGTATCTTATCTTGGTTGGG 58.951 47.826 0.00 0.00 0.00 4.12
2027 2364 3.489785 GCGACGTATCTTATCTTGGTTGG 59.510 47.826 0.00 0.00 0.00 3.77
2028 2365 4.109766 TGCGACGTATCTTATCTTGGTTG 58.890 43.478 0.00 0.00 0.00 3.77
2029 2366 4.380841 TGCGACGTATCTTATCTTGGTT 57.619 40.909 0.00 0.00 0.00 3.67
2030 2367 4.037565 TGATGCGACGTATCTTATCTTGGT 59.962 41.667 23.45 0.00 0.00 3.67
2031 2368 4.546570 TGATGCGACGTATCTTATCTTGG 58.453 43.478 23.45 0.00 0.00 3.61
2032 2369 5.002934 CGATGATGCGACGTATCTTATCTTG 59.997 44.000 23.45 6.99 0.00 3.02
2033 2370 5.089411 CGATGATGCGACGTATCTTATCTT 58.911 41.667 23.45 0.24 0.00 2.40
2034 2371 4.437524 CCGATGATGCGACGTATCTTATCT 60.438 45.833 23.45 6.41 0.00 1.98
2035 2372 3.786576 CCGATGATGCGACGTATCTTATC 59.213 47.826 23.45 17.74 0.00 1.75
2036 2373 3.190744 ACCGATGATGCGACGTATCTTAT 59.809 43.478 23.45 11.92 0.00 1.73
2037 2374 2.551032 ACCGATGATGCGACGTATCTTA 59.449 45.455 23.45 7.79 0.00 2.10
2038 2375 1.337071 ACCGATGATGCGACGTATCTT 59.663 47.619 23.45 18.29 0.00 2.40
2039 2376 0.952280 ACCGATGATGCGACGTATCT 59.048 50.000 23.45 11.39 0.00 1.98
2040 2377 1.053048 CACCGATGATGCGACGTATC 58.947 55.000 17.73 17.73 0.00 2.24
2041 2378 0.666374 TCACCGATGATGCGACGTAT 59.334 50.000 0.00 0.00 0.00 3.06
2042 2379 0.028902 CTCACCGATGATGCGACGTA 59.971 55.000 0.00 0.00 33.22 3.57
2043 2380 1.226688 CTCACCGATGATGCGACGT 60.227 57.895 0.00 0.00 33.22 4.34
2044 2381 2.580470 GCTCACCGATGATGCGACG 61.580 63.158 0.00 0.00 33.22 5.12
2045 2382 1.485838 CTGCTCACCGATGATGCGAC 61.486 60.000 0.00 0.00 33.93 5.19
2046 2383 1.227060 CTGCTCACCGATGATGCGA 60.227 57.895 0.00 0.00 33.93 5.10
2047 2384 2.242572 CCTGCTCACCGATGATGCG 61.243 63.158 0.00 0.00 33.93 4.73
2048 2385 0.250209 ATCCTGCTCACCGATGATGC 60.250 55.000 0.00 0.00 33.22 3.91
2049 2386 1.509703 CATCCTGCTCACCGATGATG 58.490 55.000 0.00 0.00 36.33 3.07
2050 2387 0.250209 GCATCCTGCTCACCGATGAT 60.250 55.000 0.00 0.00 40.96 2.45
2051 2388 1.144716 GCATCCTGCTCACCGATGA 59.855 57.895 0.00 0.00 40.96 2.92
2052 2389 1.890979 GGCATCCTGCTCACCGATG 60.891 63.158 0.00 0.00 44.28 3.84
2053 2390 2.037620 GAGGCATCCTGCTCACCGAT 62.038 60.000 0.00 0.00 44.28 4.18
2054 2391 2.685017 AGGCATCCTGCTCACCGA 60.685 61.111 0.00 0.00 44.28 4.69
2055 2392 2.202987 GAGGCATCCTGCTCACCG 60.203 66.667 0.00 0.00 44.28 4.94
2056 2393 2.202987 CGAGGCATCCTGCTCACC 60.203 66.667 0.00 0.00 44.28 4.02
2057 2394 2.866085 AAGCGAGGCATCCTGCTCAC 62.866 60.000 1.25 0.00 44.28 3.51
2058 2395 2.584261 GAAGCGAGGCATCCTGCTCA 62.584 60.000 1.25 0.00 44.28 4.26
2059 2396 1.886777 GAAGCGAGGCATCCTGCTC 60.887 63.158 1.25 0.00 44.28 4.26
2060 2397 2.188994 GAAGCGAGGCATCCTGCT 59.811 61.111 0.00 0.00 44.28 4.24
2061 2398 2.124983 TGAAGCGAGGCATCCTGC 60.125 61.111 0.00 0.00 44.08 4.85
2062 2399 1.523258 CCTGAAGCGAGGCATCCTG 60.523 63.158 0.00 0.00 31.76 3.86
2063 2400 2.906458 CCTGAAGCGAGGCATCCT 59.094 61.111 0.00 0.00 36.03 3.24
2081 2418 1.089481 AACATACATGACTGGCGCCG 61.089 55.000 23.90 18.98 0.00 6.46
2089 2426 6.239008 CCCATCCCAACATTAACATACATGAC 60.239 42.308 0.00 0.00 0.00 3.06
2092 2429 5.833131 GTCCCATCCCAACATTAACATACAT 59.167 40.000 0.00 0.00 0.00 2.29
2093 2430 5.044476 AGTCCCATCCCAACATTAACATACA 60.044 40.000 0.00 0.00 0.00 2.29
2095 2432 5.725551 AGTCCCATCCCAACATTAACATA 57.274 39.130 0.00 0.00 0.00 2.29
2097 2434 4.538490 ACTAGTCCCATCCCAACATTAACA 59.462 41.667 0.00 0.00 0.00 2.41
2099 2436 7.460214 AATACTAGTCCCATCCCAACATTAA 57.540 36.000 0.00 0.00 0.00 1.40
2100 2437 7.460214 AAATACTAGTCCCATCCCAACATTA 57.540 36.000 0.00 0.00 0.00 1.90
2101 2438 5.994416 AATACTAGTCCCATCCCAACATT 57.006 39.130 0.00 0.00 0.00 2.71
2102 2439 5.994416 AAATACTAGTCCCATCCCAACAT 57.006 39.130 0.00 0.00 0.00 2.71
2103 2440 5.491078 AGAAAATACTAGTCCCATCCCAACA 59.509 40.000 0.00 0.00 0.00 3.33
2104 2441 6.002653 AGAAAATACTAGTCCCATCCCAAC 57.997 41.667 0.00 0.00 0.00 3.77
2105 2442 5.970640 AGAGAAAATACTAGTCCCATCCCAA 59.029 40.000 0.00 0.00 0.00 4.12
2141 2691 1.845809 GCCGCCCAATCGCTCTTATG 61.846 60.000 0.00 0.00 0.00 1.90
2143 2693 2.203015 GCCGCCCAATCGCTCTTA 60.203 61.111 0.00 0.00 0.00 2.10
2144 2694 4.408821 TGCCGCCCAATCGCTCTT 62.409 61.111 0.00 0.00 0.00 2.85
2149 2699 2.040544 AAAGAGTGCCGCCCAATCG 61.041 57.895 0.00 0.00 43.04 3.34
2150 2700 1.508088 CAAAGAGTGCCGCCCAATC 59.492 57.895 0.00 0.00 38.77 2.67
2151 2701 3.685435 CAAAGAGTGCCGCCCAAT 58.315 55.556 0.00 0.00 0.00 3.16
2168 2718 3.685643 TAAACTAAGGCGGCCGGGC 62.686 63.158 29.38 20.04 42.69 6.13
2169 2719 1.078285 TTAAACTAAGGCGGCCGGG 60.078 57.895 29.38 10.15 0.00 5.73
2170 2720 0.392060 ACTTAAACTAAGGCGGCCGG 60.392 55.000 29.38 12.50 40.08 6.13
2171 2721 2.199236 CTACTTAAACTAAGGCGGCCG 58.801 52.381 24.05 24.05 40.08 6.13
2172 2722 2.558378 CCTACTTAAACTAAGGCGGCC 58.442 52.381 12.11 12.11 40.08 6.13
2173 2723 2.558378 CCCTACTTAAACTAAGGCGGC 58.442 52.381 0.00 0.00 40.08 6.53
2174 2724 2.093341 TGCCCTACTTAAACTAAGGCGG 60.093 50.000 0.00 0.00 40.08 6.13
2175 2725 2.934553 GTGCCCTACTTAAACTAAGGCG 59.065 50.000 0.00 0.00 40.08 5.52
2180 2744 5.829062 TTCAAGGTGCCCTACTTAAACTA 57.171 39.130 0.00 0.00 31.13 2.24
2189 2753 1.207089 CAGACGATTCAAGGTGCCCTA 59.793 52.381 0.00 0.00 31.13 3.53
2191 2755 1.648467 GCAGACGATTCAAGGTGCCC 61.648 60.000 0.00 0.00 0.00 5.36
2196 2760 3.529533 AGAAGATGCAGACGATTCAAGG 58.470 45.455 0.00 0.00 0.00 3.61
2205 2769 3.657634 TGTTGTGAGAGAAGATGCAGAC 58.342 45.455 0.00 0.00 0.00 3.51
2239 2803 3.128764 TCAGTAGTGTAGCAGGACGATTG 59.871 47.826 0.00 0.00 0.00 2.67
2240 2804 3.128938 GTCAGTAGTGTAGCAGGACGATT 59.871 47.826 0.00 0.00 0.00 3.34
2241 2805 2.683867 GTCAGTAGTGTAGCAGGACGAT 59.316 50.000 0.00 0.00 0.00 3.73
2311 2875 0.957395 ACAAGCAGGCAATCGAGTGG 60.957 55.000 15.48 0.00 0.00 4.00
2324 3012 5.767665 AGTGAATACCATGTTTACACAAGCA 59.232 36.000 0.00 0.00 36.16 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.