Multiple sequence alignment - TraesCS2B01G609100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G609100 chr2B 100.000 3076 0 0 1 3076 789432663 789435738 0.000000e+00 5681.0
1 TraesCS2B01G609100 chr2B 96.286 1804 39 8 457 2250 571914868 571916653 0.000000e+00 2935.0
2 TraesCS2B01G609100 chr2B 88.199 805 67 17 1533 2327 789274547 789275333 0.000000e+00 935.0
3 TraesCS2B01G609100 chr2B 87.578 805 71 18 1533 2327 571920514 571921299 0.000000e+00 905.0
4 TraesCS2B01G609100 chr2B 97.581 124 3 0 2325 2448 571916991 571917114 2.400000e-51 213.0
5 TraesCS2B01G609100 chr2B 74.384 406 91 10 2643 3039 574784140 574783739 8.830000e-36 161.0
6 TraesCS2B01G609100 chr2B 92.500 40 1 1 1 40 440169272 440169309 4.280000e-04 56.5
7 TraesCS2B01G609100 chr2B 96.970 33 1 0 3 35 562413605 562413573 4.280000e-04 56.5
8 TraesCS2B01G609100 chr2A 90.917 1167 67 19 1160 2310 773395277 773396420 0.000000e+00 1531.0
9 TraesCS2B01G609100 chr2A 84.290 331 28 15 819 1134 773390997 773391318 4.980000e-78 302.0
10 TraesCS2B01G609100 chr2A 81.924 343 31 11 502 815 773390608 773390948 8.460000e-66 261.0
11 TraesCS2B01G609100 chr2A 96.774 124 4 0 2325 2448 773396840 773396963 1.120000e-49 207.0
12 TraesCS2B01G609100 chr2A 100.000 32 0 0 1 32 666055730 666055699 3.310000e-05 60.2
13 TraesCS2B01G609100 chr2D 92.140 1056 73 5 1201 2250 646044953 646043902 0.000000e+00 1482.0
14 TraesCS2B01G609100 chr2D 89.920 1002 68 15 1325 2317 646048178 646047201 0.000000e+00 1260.0
15 TraesCS2B01G609100 chr2D 91.795 585 47 1 2453 3037 646035721 646035138 0.000000e+00 813.0
16 TraesCS2B01G609100 chr2D 85.714 392 22 12 457 815 646049275 646048885 1.730000e-102 383.0
17 TraesCS2B01G609100 chr2D 90.909 275 22 3 1865 2139 646363198 646363469 1.740000e-97 366.0
18 TraesCS2B01G609100 chr2D 85.387 349 16 8 819 1142 646045481 646045143 2.290000e-86 329.0
19 TraesCS2B01G609100 chr2D 94.040 151 8 1 959 1109 646048694 646048545 8.580000e-56 228.0
20 TraesCS2B01G609100 chr2D 91.515 165 10 1 1157 1321 646048457 646048297 1.110000e-54 224.0
21 TraesCS2B01G609100 chr2D 90.845 142 8 3 959 1100 646367307 646367443 5.240000e-43 185.0
22 TraesCS2B01G609100 chr2D 91.045 134 12 0 2318 2451 646046923 646046790 6.780000e-42 182.0
23 TraesCS2B01G609100 chr2D 74.932 367 64 15 2597 2946 2641056 2640701 3.200000e-30 143.0
24 TraesCS2B01G609100 chr2D 98.039 51 1 0 819 869 646048836 646048786 4.220000e-14 89.8
25 TraesCS2B01G609100 chr2D 97.297 37 1 0 3040 3076 646035107 646035071 2.560000e-06 63.9
26 TraesCS2B01G609100 chr2D 90.909 44 4 0 2751 2794 36553240 36553283 3.310000e-05 60.2
27 TraesCS2B01G609100 chr2D 97.143 35 1 0 781 815 646045564 646045530 3.310000e-05 60.2
28 TraesCS2B01G609100 chr7A 89.242 660 55 9 1457 2106 78449363 78450016 0.000000e+00 811.0
29 TraesCS2B01G609100 chr7A 78.304 507 28 27 904 1386 78448622 78449070 5.090000e-63 252.0
30 TraesCS2B01G609100 chr7A 82.456 228 40 0 2467 2694 56710836 56710609 1.870000e-47 200.0
31 TraesCS2B01G609100 chr5A 98.472 458 7 0 1 458 139517449 139516992 0.000000e+00 808.0
32 TraesCS2B01G609100 chr5A 81.667 240 43 1 2454 2692 389851488 389851249 6.730000e-47 198.0
33 TraesCS2B01G609100 chr5B 98.253 458 7 1 1 458 570823797 570823341 0.000000e+00 800.0
34 TraesCS2B01G609100 chr7B 96.943 458 14 0 1 458 5324325 5323868 0.000000e+00 769.0
35 TraesCS2B01G609100 chr4B 96.725 458 15 0 1 458 404460232 404460689 0.000000e+00 763.0
36 TraesCS2B01G609100 chrUn 100.000 398 0 0 516 913 479003178 479002781 0.000000e+00 736.0
37 TraesCS2B01G609100 chr6B 82.500 240 39 2 2453 2692 454723548 454723312 1.120000e-49 207.0
38 TraesCS2B01G609100 chr3B 82.427 239 41 1 2453 2691 723442227 723441990 1.120000e-49 207.0
39 TraesCS2B01G609100 chr3B 100.000 32 0 0 1 32 174883779 174883810 3.310000e-05 60.2
40 TraesCS2B01G609100 chr7D 81.667 240 42 2 2453 2692 2816138 2815901 6.730000e-47 198.0
41 TraesCS2B01G609100 chr1D 82.051 234 40 2 2460 2692 382775136 382775368 6.730000e-47 198.0
42 TraesCS2B01G609100 chr1D 82.328 232 38 3 2454 2684 416299967 416300196 6.730000e-47 198.0
43 TraesCS2B01G609100 chr5D 82.096 229 39 2 2467 2694 155855916 155855689 8.700000e-46 195.0
44 TraesCS2B01G609100 chr5D 78.189 243 44 7 2591 2825 391787383 391787624 2.470000e-31 147.0
45 TraesCS2B01G609100 chr5D 97.059 34 0 1 3 35 276657931 276657964 4.280000e-04 56.5
46 TraesCS2B01G609100 chr4D 75.616 406 79 14 2587 2985 9489388 9489780 1.880000e-42 183.0
47 TraesCS2B01G609100 chr4D 74.336 339 68 15 2587 2914 454609027 454608697 3.220000e-25 126.0
48 TraesCS2B01G609100 chr3D 82.653 98 17 0 2867 2964 37304195 37304098 1.520000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G609100 chr2B 789432663 789435738 3075 False 5681.000000 5681 100.000000 1 3076 1 chr2B.!!$F3 3075
1 TraesCS2B01G609100 chr2B 571914868 571921299 6431 False 1351.000000 2935 93.815000 457 2448 3 chr2B.!!$F4 1991
2 TraesCS2B01G609100 chr2B 789274547 789275333 786 False 935.000000 935 88.199000 1533 2327 1 chr2B.!!$F2 794
3 TraesCS2B01G609100 chr2A 773390608 773396963 6355 False 575.250000 1531 88.476250 502 2448 4 chr2A.!!$F1 1946
4 TraesCS2B01G609100 chr2D 646043902 646049275 5373 True 470.888889 1482 91.660333 457 2451 9 chr2D.!!$R3 1994
5 TraesCS2B01G609100 chr2D 646035071 646035721 650 True 438.450000 813 94.546000 2453 3076 2 chr2D.!!$R2 623
6 TraesCS2B01G609100 chr2D 646363198 646367443 4245 False 275.500000 366 90.877000 959 2139 2 chr2D.!!$F2 1180
7 TraesCS2B01G609100 chr7A 78448622 78450016 1394 False 531.500000 811 83.773000 904 2106 2 chr7A.!!$F1 1202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
335 336 0.108992 GTCGGACGAAGCATACCACA 60.109 55.0 0.00 0.00 0.00 4.17 F
450 451 0.380378 TTTCTCCTGTTGCAACGCAC 59.620 50.0 23.79 1.83 38.71 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1764 6188 1.159285 CCAAGAGAGCGCATGTTTCA 58.841 50.000 11.47 0.0 0.0 2.69 R
2448 7360 1.079127 CCCCGACACCACTGCTAAG 60.079 63.158 0.00 0.0 0.0 2.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.813826 AATACTTATATTTTGGAATGGAGGGAG 57.186 33.333 0.00 0.00 0.00 4.30
30 31 7.226059 ACTTATATTTTGGAATGGAGGGAGT 57.774 36.000 0.00 0.00 0.00 3.85
31 32 8.344939 ACTTATATTTTGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
32 33 8.787818 ACTTATATTTTGGAATGGAGGGAGTAA 58.212 33.333 0.00 0.00 0.00 2.24
33 34 9.640952 CTTATATTTTGGAATGGAGGGAGTAAA 57.359 33.333 0.00 0.00 0.00 2.01
35 36 8.712228 ATATTTTGGAATGGAGGGAGTAAATC 57.288 34.615 0.00 0.00 0.00 2.17
36 37 5.528600 TTTGGAATGGAGGGAGTAAATCA 57.471 39.130 0.00 0.00 0.00 2.57
37 38 5.732331 TTGGAATGGAGGGAGTAAATCAT 57.268 39.130 0.00 0.00 0.00 2.45
38 39 6.840090 TTGGAATGGAGGGAGTAAATCATA 57.160 37.500 0.00 0.00 0.00 2.15
39 40 6.439636 TGGAATGGAGGGAGTAAATCATAG 57.560 41.667 0.00 0.00 0.00 2.23
40 41 6.150332 TGGAATGGAGGGAGTAAATCATAGA 58.850 40.000 0.00 0.00 0.00 1.98
41 42 6.619437 TGGAATGGAGGGAGTAAATCATAGAA 59.381 38.462 0.00 0.00 0.00 2.10
42 43 7.128728 TGGAATGGAGGGAGTAAATCATAGAAA 59.871 37.037 0.00 0.00 0.00 2.52
43 44 7.998964 GGAATGGAGGGAGTAAATCATAGAAAA 59.001 37.037 0.00 0.00 0.00 2.29
44 45 8.753497 AATGGAGGGAGTAAATCATAGAAAAC 57.247 34.615 0.00 0.00 0.00 2.43
45 46 7.510675 TGGAGGGAGTAAATCATAGAAAACT 57.489 36.000 0.00 0.00 0.00 2.66
46 47 7.565680 TGGAGGGAGTAAATCATAGAAAACTC 58.434 38.462 0.00 0.00 34.08 3.01
47 48 7.403231 TGGAGGGAGTAAATCATAGAAAACTCT 59.597 37.037 0.00 0.00 34.99 3.24
48 49 7.929245 GGAGGGAGTAAATCATAGAAAACTCTC 59.071 40.741 0.00 0.00 35.20 3.20
49 50 8.380742 AGGGAGTAAATCATAGAAAACTCTCA 57.619 34.615 3.27 0.00 37.01 3.27
50 51 8.997734 AGGGAGTAAATCATAGAAAACTCTCAT 58.002 33.333 3.27 0.00 37.01 2.90
51 52 9.050601 GGGAGTAAATCATAGAAAACTCTCATG 57.949 37.037 0.00 0.00 35.11 3.07
52 53 9.823647 GGAGTAAATCATAGAAAACTCTCATGA 57.176 33.333 0.00 0.00 34.99 3.07
56 57 7.565323 AATCATAGAAAACTCTCATGAAGGC 57.435 36.000 0.00 0.00 0.00 4.35
57 58 6.053632 TCATAGAAAACTCTCATGAAGGCA 57.946 37.500 0.00 0.00 0.00 4.75
58 59 6.475504 TCATAGAAAACTCTCATGAAGGCAA 58.524 36.000 0.00 0.00 0.00 4.52
59 60 6.596888 TCATAGAAAACTCTCATGAAGGCAAG 59.403 38.462 0.00 0.00 0.00 4.01
60 61 3.505293 AGAAAACTCTCATGAAGGCAAGC 59.495 43.478 0.00 0.00 0.00 4.01
61 62 2.574006 AACTCTCATGAAGGCAAGCA 57.426 45.000 0.00 0.00 0.00 3.91
62 63 2.574006 ACTCTCATGAAGGCAAGCAA 57.426 45.000 0.00 0.00 0.00 3.91
63 64 3.083122 ACTCTCATGAAGGCAAGCAAT 57.917 42.857 0.00 0.00 0.00 3.56
64 65 3.428532 ACTCTCATGAAGGCAAGCAATT 58.571 40.909 0.00 0.00 0.00 2.32
65 66 3.830755 ACTCTCATGAAGGCAAGCAATTT 59.169 39.130 0.00 0.00 0.00 1.82
66 67 4.174009 CTCTCATGAAGGCAAGCAATTTG 58.826 43.478 0.00 0.00 39.88 2.32
67 68 3.056393 TCTCATGAAGGCAAGCAATTTGG 60.056 43.478 0.00 0.00 37.26 3.28
68 69 2.027929 TCATGAAGGCAAGCAATTTGGG 60.028 45.455 0.00 0.00 37.26 4.12
69 70 1.422531 TGAAGGCAAGCAATTTGGGT 58.577 45.000 0.00 0.00 37.26 4.51
70 71 1.767681 TGAAGGCAAGCAATTTGGGTT 59.232 42.857 0.00 0.00 37.26 4.11
71 72 2.145536 GAAGGCAAGCAATTTGGGTTG 58.854 47.619 0.00 3.93 46.23 3.77
80 81 3.681593 CAATTTGGGTTGCAATCTCCA 57.318 42.857 10.07 11.81 0.00 3.86
81 82 3.592059 CAATTTGGGTTGCAATCTCCAG 58.408 45.455 10.07 0.28 0.00 3.86
82 83 2.380064 TTTGGGTTGCAATCTCCAGT 57.620 45.000 10.07 0.00 0.00 4.00
83 84 1.909700 TTGGGTTGCAATCTCCAGTC 58.090 50.000 10.07 0.00 0.00 3.51
84 85 0.770499 TGGGTTGCAATCTCCAGTCA 59.230 50.000 10.07 0.00 0.00 3.41
85 86 1.355381 TGGGTTGCAATCTCCAGTCAT 59.645 47.619 10.07 0.00 0.00 3.06
86 87 1.747355 GGGTTGCAATCTCCAGTCATG 59.253 52.381 10.07 0.00 0.00 3.07
87 88 2.618816 GGGTTGCAATCTCCAGTCATGA 60.619 50.000 10.07 0.00 0.00 3.07
88 89 3.084039 GGTTGCAATCTCCAGTCATGAA 58.916 45.455 0.59 0.00 0.00 2.57
89 90 3.698040 GGTTGCAATCTCCAGTCATGAAT 59.302 43.478 0.59 0.00 0.00 2.57
90 91 4.439700 GGTTGCAATCTCCAGTCATGAATG 60.440 45.833 16.10 16.10 0.00 2.67
91 92 2.686405 TGCAATCTCCAGTCATGAATGC 59.314 45.455 17.54 5.10 0.00 3.56
92 93 2.950309 GCAATCTCCAGTCATGAATGCT 59.050 45.455 17.54 0.00 0.00 3.79
93 94 4.132336 GCAATCTCCAGTCATGAATGCTA 58.868 43.478 17.54 6.92 0.00 3.49
94 95 4.213694 GCAATCTCCAGTCATGAATGCTAG 59.786 45.833 17.54 15.59 0.00 3.42
95 96 4.620589 ATCTCCAGTCATGAATGCTAGG 57.379 45.455 17.54 4.29 0.00 3.02
96 97 2.702478 TCTCCAGTCATGAATGCTAGGG 59.298 50.000 17.54 4.61 0.00 3.53
97 98 2.702478 CTCCAGTCATGAATGCTAGGGA 59.298 50.000 17.54 8.18 0.00 4.20
98 99 3.114606 TCCAGTCATGAATGCTAGGGAA 58.885 45.455 17.54 0.00 0.00 3.97
99 100 3.118261 TCCAGTCATGAATGCTAGGGAAC 60.118 47.826 17.54 0.00 0.00 3.62
100 101 3.370846 CCAGTCATGAATGCTAGGGAACA 60.371 47.826 17.54 0.00 0.00 3.18
101 102 4.264253 CAGTCATGAATGCTAGGGAACAA 58.736 43.478 10.61 0.00 0.00 2.83
102 103 4.701651 CAGTCATGAATGCTAGGGAACAAA 59.298 41.667 10.61 0.00 0.00 2.83
103 104 4.946157 AGTCATGAATGCTAGGGAACAAAG 59.054 41.667 0.00 0.00 0.00 2.77
104 105 4.943705 GTCATGAATGCTAGGGAACAAAGA 59.056 41.667 0.00 0.00 0.00 2.52
105 106 5.415701 GTCATGAATGCTAGGGAACAAAGAA 59.584 40.000 0.00 0.00 0.00 2.52
106 107 5.649395 TCATGAATGCTAGGGAACAAAGAAG 59.351 40.000 0.00 0.00 0.00 2.85
107 108 4.985538 TGAATGCTAGGGAACAAAGAAGT 58.014 39.130 0.00 0.00 0.00 3.01
108 109 6.121776 TGAATGCTAGGGAACAAAGAAGTA 57.878 37.500 0.00 0.00 0.00 2.24
109 110 6.539173 TGAATGCTAGGGAACAAAGAAGTAA 58.461 36.000 0.00 0.00 0.00 2.24
110 111 7.001674 TGAATGCTAGGGAACAAAGAAGTAAA 58.998 34.615 0.00 0.00 0.00 2.01
111 112 6.819397 ATGCTAGGGAACAAAGAAGTAAAC 57.181 37.500 0.00 0.00 0.00 2.01
112 113 4.753107 TGCTAGGGAACAAAGAAGTAAACG 59.247 41.667 0.00 0.00 0.00 3.60
113 114 4.992951 GCTAGGGAACAAAGAAGTAAACGA 59.007 41.667 0.00 0.00 0.00 3.85
114 115 5.120363 GCTAGGGAACAAAGAAGTAAACGAG 59.880 44.000 0.00 0.00 0.00 4.18
115 116 5.286267 AGGGAACAAAGAAGTAAACGAGA 57.714 39.130 0.00 0.00 0.00 4.04
116 117 5.866207 AGGGAACAAAGAAGTAAACGAGAT 58.134 37.500 0.00 0.00 0.00 2.75
117 118 7.001099 AGGGAACAAAGAAGTAAACGAGATA 57.999 36.000 0.00 0.00 0.00 1.98
118 119 7.097834 AGGGAACAAAGAAGTAAACGAGATAG 58.902 38.462 0.00 0.00 0.00 2.08
119 120 7.039223 AGGGAACAAAGAAGTAAACGAGATAGA 60.039 37.037 0.00 0.00 0.00 1.98
120 121 7.275999 GGGAACAAAGAAGTAAACGAGATAGAG 59.724 40.741 0.00 0.00 0.00 2.43
121 122 8.027771 GGAACAAAGAAGTAAACGAGATAGAGA 58.972 37.037 0.00 0.00 0.00 3.10
122 123 8.973835 AACAAAGAAGTAAACGAGATAGAGAG 57.026 34.615 0.00 0.00 0.00 3.20
123 124 7.030768 ACAAAGAAGTAAACGAGATAGAGAGC 58.969 38.462 0.00 0.00 0.00 4.09
124 125 5.412526 AGAAGTAAACGAGATAGAGAGCG 57.587 43.478 0.00 0.00 0.00 5.03
125 126 4.877251 AGAAGTAAACGAGATAGAGAGCGT 59.123 41.667 0.00 0.00 38.81 5.07
127 128 6.538021 AGAAGTAAACGAGATAGAGAGCGTTA 59.462 38.462 0.00 0.00 44.99 3.18
128 129 6.289745 AGTAAACGAGATAGAGAGCGTTAG 57.710 41.667 0.00 0.00 44.99 2.34
129 130 4.555348 AAACGAGATAGAGAGCGTTAGG 57.445 45.455 0.00 0.00 44.99 2.69
130 131 1.874872 ACGAGATAGAGAGCGTTAGGC 59.125 52.381 0.00 0.00 44.05 3.93
131 132 4.241849 AACGAGATAGAGAGCGTTAGGCA 61.242 47.826 0.00 0.00 44.07 4.75
132 133 5.522361 AACGAGATAGAGAGCGTTAGGCAT 61.522 45.833 0.00 0.00 44.07 4.40
133 134 7.497071 AACGAGATAGAGAGCGTTAGGCATG 62.497 48.000 0.00 0.00 44.07 4.06
152 153 3.959535 TGGATGGCCATGAAGAAAAAC 57.040 42.857 26.56 4.66 39.92 2.43
153 154 2.566724 TGGATGGCCATGAAGAAAAACC 59.433 45.455 26.56 15.15 39.92 3.27
154 155 2.417243 GGATGGCCATGAAGAAAAACCG 60.417 50.000 26.56 0.00 0.00 4.44
155 156 0.965439 TGGCCATGAAGAAAAACCGG 59.035 50.000 0.00 0.00 0.00 5.28
156 157 1.253100 GGCCATGAAGAAAAACCGGA 58.747 50.000 9.46 0.00 0.00 5.14
157 158 1.616374 GGCCATGAAGAAAAACCGGAA 59.384 47.619 9.46 0.00 0.00 4.30
158 159 2.036604 GGCCATGAAGAAAAACCGGAAA 59.963 45.455 9.46 0.00 0.00 3.13
159 160 3.493524 GGCCATGAAGAAAAACCGGAAAA 60.494 43.478 9.46 0.00 0.00 2.29
160 161 4.123506 GCCATGAAGAAAAACCGGAAAAA 58.876 39.130 9.46 0.00 0.00 1.94
161 162 4.025229 GCCATGAAGAAAAACCGGAAAAAC 60.025 41.667 9.46 0.00 0.00 2.43
162 163 5.356426 CCATGAAGAAAAACCGGAAAAACT 58.644 37.500 9.46 0.00 0.00 2.66
163 164 6.508777 CCATGAAGAAAAACCGGAAAAACTA 58.491 36.000 9.46 0.00 0.00 2.24
164 165 6.981559 CCATGAAGAAAAACCGGAAAAACTAA 59.018 34.615 9.46 0.00 0.00 2.24
165 166 7.492994 CCATGAAGAAAAACCGGAAAAACTAAA 59.507 33.333 9.46 0.00 0.00 1.85
166 167 8.874816 CATGAAGAAAAACCGGAAAAACTAAAA 58.125 29.630 9.46 0.00 0.00 1.52
167 168 8.468720 TGAAGAAAAACCGGAAAAACTAAAAG 57.531 30.769 9.46 0.00 0.00 2.27
168 169 8.305317 TGAAGAAAAACCGGAAAAACTAAAAGA 58.695 29.630 9.46 0.00 0.00 2.52
169 170 8.697846 AAGAAAAACCGGAAAAACTAAAAGAG 57.302 30.769 9.46 0.00 0.00 2.85
170 171 6.755141 AGAAAAACCGGAAAAACTAAAAGAGC 59.245 34.615 9.46 0.00 0.00 4.09
171 172 5.585820 AAACCGGAAAAACTAAAAGAGCA 57.414 34.783 9.46 0.00 0.00 4.26
172 173 5.585820 AACCGGAAAAACTAAAAGAGCAA 57.414 34.783 9.46 0.00 0.00 3.91
173 174 4.928601 ACCGGAAAAACTAAAAGAGCAAC 58.071 39.130 9.46 0.00 0.00 4.17
174 175 3.972502 CCGGAAAAACTAAAAGAGCAACG 59.027 43.478 0.00 0.00 0.00 4.10
175 176 4.496840 CCGGAAAAACTAAAAGAGCAACGT 60.497 41.667 0.00 0.00 0.00 3.99
176 177 4.436523 CGGAAAAACTAAAAGAGCAACGTG 59.563 41.667 0.00 0.00 0.00 4.49
177 178 5.575019 GGAAAAACTAAAAGAGCAACGTGA 58.425 37.500 0.00 0.00 0.00 4.35
178 179 6.031471 GGAAAAACTAAAAGAGCAACGTGAA 58.969 36.000 0.00 0.00 0.00 3.18
179 180 6.196538 GGAAAAACTAAAAGAGCAACGTGAAG 59.803 38.462 0.00 0.00 0.00 3.02
180 181 3.879932 ACTAAAAGAGCAACGTGAAGC 57.120 42.857 0.00 0.00 0.00 3.86
181 182 2.548480 ACTAAAAGAGCAACGTGAAGCC 59.452 45.455 0.00 0.00 0.00 4.35
182 183 1.388547 AAAAGAGCAACGTGAAGCCA 58.611 45.000 0.00 0.00 0.00 4.75
183 184 1.388547 AAAGAGCAACGTGAAGCCAA 58.611 45.000 0.00 0.00 0.00 4.52
184 185 1.609208 AAGAGCAACGTGAAGCCAAT 58.391 45.000 0.00 0.00 0.00 3.16
185 186 1.160137 AGAGCAACGTGAAGCCAATC 58.840 50.000 0.00 0.00 0.00 2.67
186 187 0.874390 GAGCAACGTGAAGCCAATCA 59.126 50.000 0.00 0.00 0.00 2.57
187 188 1.266718 GAGCAACGTGAAGCCAATCAA 59.733 47.619 0.00 0.00 0.00 2.57
188 189 1.001378 AGCAACGTGAAGCCAATCAAC 60.001 47.619 0.00 0.00 0.00 3.18
189 190 1.268999 GCAACGTGAAGCCAATCAACA 60.269 47.619 0.00 0.00 0.00 3.33
190 191 2.797792 GCAACGTGAAGCCAATCAACAA 60.798 45.455 0.00 0.00 0.00 2.83
191 192 3.443037 CAACGTGAAGCCAATCAACAAA 58.557 40.909 0.00 0.00 0.00 2.83
192 193 3.791973 ACGTGAAGCCAATCAACAAAA 57.208 38.095 0.00 0.00 0.00 2.44
193 194 3.443976 ACGTGAAGCCAATCAACAAAAC 58.556 40.909 0.00 0.00 0.00 2.43
194 195 3.119316 ACGTGAAGCCAATCAACAAAACA 60.119 39.130 0.00 0.00 0.00 2.83
195 196 3.862267 CGTGAAGCCAATCAACAAAACAA 59.138 39.130 0.00 0.00 0.00 2.83
196 197 4.328440 CGTGAAGCCAATCAACAAAACAAA 59.672 37.500 0.00 0.00 0.00 2.83
197 198 5.163913 CGTGAAGCCAATCAACAAAACAAAA 60.164 36.000 0.00 0.00 0.00 2.44
198 199 6.250089 GTGAAGCCAATCAACAAAACAAAAG 58.750 36.000 0.00 0.00 0.00 2.27
199 200 6.091986 GTGAAGCCAATCAACAAAACAAAAGA 59.908 34.615 0.00 0.00 0.00 2.52
200 201 6.652481 TGAAGCCAATCAACAAAACAAAAGAA 59.348 30.769 0.00 0.00 0.00 2.52
201 202 6.421377 AGCCAATCAACAAAACAAAAGAAC 57.579 33.333 0.00 0.00 0.00 3.01
202 203 6.172630 AGCCAATCAACAAAACAAAAGAACT 58.827 32.000 0.00 0.00 0.00 3.01
203 204 7.327214 AGCCAATCAACAAAACAAAAGAACTA 58.673 30.769 0.00 0.00 0.00 2.24
204 205 7.821846 AGCCAATCAACAAAACAAAAGAACTAA 59.178 29.630 0.00 0.00 0.00 2.24
205 206 8.447053 GCCAATCAACAAAACAAAAGAACTAAA 58.553 29.630 0.00 0.00 0.00 1.85
206 207 9.971744 CCAATCAACAAAACAAAAGAACTAAAG 57.028 29.630 0.00 0.00 0.00 1.85
215 216 8.942338 AAACAAAAGAACTAAAGATTCAACCC 57.058 30.769 0.00 0.00 0.00 4.11
216 217 7.654022 ACAAAAGAACTAAAGATTCAACCCA 57.346 32.000 0.00 0.00 0.00 4.51
217 218 7.716612 ACAAAAGAACTAAAGATTCAACCCAG 58.283 34.615 0.00 0.00 0.00 4.45
218 219 7.342026 ACAAAAGAACTAAAGATTCAACCCAGT 59.658 33.333 0.00 0.00 0.00 4.00
219 220 7.898014 AAAGAACTAAAGATTCAACCCAGTT 57.102 32.000 0.00 0.00 0.00 3.16
220 221 6.884280 AGAACTAAAGATTCAACCCAGTTG 57.116 37.500 0.96 0.96 43.99 3.16
221 222 5.241728 AGAACTAAAGATTCAACCCAGTTGC 59.758 40.000 2.56 0.00 42.55 4.17
222 223 4.469657 ACTAAAGATTCAACCCAGTTGCA 58.530 39.130 2.56 0.00 42.55 4.08
223 224 4.892934 ACTAAAGATTCAACCCAGTTGCAA 59.107 37.500 0.00 0.00 42.55 4.08
224 225 4.751767 AAAGATTCAACCCAGTTGCAAA 57.248 36.364 0.00 0.00 42.55 3.68
225 226 4.751767 AAGATTCAACCCAGTTGCAAAA 57.248 36.364 0.00 0.00 42.55 2.44
226 227 4.751767 AGATTCAACCCAGTTGCAAAAA 57.248 36.364 0.00 0.00 42.55 1.94
251 252 9.561069 AAAGATGTACACAATAGAACAGAAAGT 57.439 29.630 0.00 0.00 0.00 2.66
252 253 9.561069 AAGATGTACACAATAGAACAGAAAGTT 57.439 29.630 0.00 0.00 44.93 2.66
258 259 8.958119 ACACAATAGAACAGAAAGTTAGAACA 57.042 30.769 0.00 0.00 41.51 3.18
259 260 9.561069 ACACAATAGAACAGAAAGTTAGAACAT 57.439 29.630 0.00 0.00 41.51 2.71
266 267 9.429359 AGAACAGAAAGTTAGAACATCTACATG 57.571 33.333 0.00 0.00 41.51 3.21
267 268 9.424319 GAACAGAAAGTTAGAACATCTACATGA 57.576 33.333 0.00 0.00 41.51 3.07
268 269 8.764524 ACAGAAAGTTAGAACATCTACATGAC 57.235 34.615 0.00 0.00 33.72 3.06
269 270 8.367911 ACAGAAAGTTAGAACATCTACATGACA 58.632 33.333 0.00 0.00 33.72 3.58
270 271 9.208022 CAGAAAGTTAGAACATCTACATGACAA 57.792 33.333 0.00 0.00 33.72 3.18
271 272 9.429359 AGAAAGTTAGAACATCTACATGACAAG 57.571 33.333 0.00 0.00 33.72 3.16
272 273 9.209175 GAAAGTTAGAACATCTACATGACAAGT 57.791 33.333 0.00 0.00 33.72 3.16
274 275 9.640963 AAGTTAGAACATCTACATGACAAGTAC 57.359 33.333 0.00 0.00 33.72 2.73
275 276 9.026121 AGTTAGAACATCTACATGACAAGTACT 57.974 33.333 0.00 0.00 33.72 2.73
276 277 9.640963 GTTAGAACATCTACATGACAAGTACTT 57.359 33.333 1.12 1.12 33.72 2.24
277 278 9.856488 TTAGAACATCTACATGACAAGTACTTC 57.144 33.333 4.77 0.00 33.72 3.01
278 279 7.896811 AGAACATCTACATGACAAGTACTTCA 58.103 34.615 4.77 2.00 33.72 3.02
279 280 7.815068 AGAACATCTACATGACAAGTACTTCAC 59.185 37.037 4.77 3.48 33.72 3.18
280 281 6.993079 ACATCTACATGACAAGTACTTCACA 58.007 36.000 4.77 9.24 33.72 3.58
281 282 7.093354 ACATCTACATGACAAGTACTTCACAG 58.907 38.462 4.77 1.65 33.72 3.66
282 283 6.650427 TCTACATGACAAGTACTTCACAGT 57.350 37.500 4.77 7.32 36.99 3.55
283 284 7.050970 TCTACATGACAAGTACTTCACAGTT 57.949 36.000 4.77 3.25 34.06 3.16
284 285 8.173542 TCTACATGACAAGTACTTCACAGTTA 57.826 34.615 4.77 0.00 34.06 2.24
285 286 8.297426 TCTACATGACAAGTACTTCACAGTTAG 58.703 37.037 4.77 11.95 34.06 2.34
286 287 5.696724 ACATGACAAGTACTTCACAGTTAGC 59.303 40.000 4.77 0.00 34.06 3.09
287 288 5.270893 TGACAAGTACTTCACAGTTAGCA 57.729 39.130 4.77 0.00 34.06 3.49
288 289 5.047847 TGACAAGTACTTCACAGTTAGCAC 58.952 41.667 4.77 0.00 34.06 4.40
289 290 5.018539 ACAAGTACTTCACAGTTAGCACA 57.981 39.130 4.77 0.00 34.06 4.57
290 291 4.809426 ACAAGTACTTCACAGTTAGCACAC 59.191 41.667 4.77 0.00 34.06 3.82
291 292 4.665833 AGTACTTCACAGTTAGCACACA 57.334 40.909 0.00 0.00 34.06 3.72
292 293 4.369182 AGTACTTCACAGTTAGCACACAC 58.631 43.478 0.00 0.00 34.06 3.82
293 294 2.201732 ACTTCACAGTTAGCACACACG 58.798 47.619 0.00 0.00 0.00 4.49
294 295 2.159156 ACTTCACAGTTAGCACACACGA 60.159 45.455 0.00 0.00 0.00 4.35
295 296 1.847818 TCACAGTTAGCACACACGAC 58.152 50.000 0.00 0.00 0.00 4.34
296 297 1.135333 TCACAGTTAGCACACACGACA 59.865 47.619 0.00 0.00 0.00 4.35
297 298 1.930503 CACAGTTAGCACACACGACAA 59.069 47.619 0.00 0.00 0.00 3.18
298 299 2.350192 CACAGTTAGCACACACGACAAA 59.650 45.455 0.00 0.00 0.00 2.83
299 300 3.004171 ACAGTTAGCACACACGACAAAA 58.996 40.909 0.00 0.00 0.00 2.44
300 301 3.063452 ACAGTTAGCACACACGACAAAAG 59.937 43.478 0.00 0.00 0.00 2.27
301 302 3.063452 CAGTTAGCACACACGACAAAAGT 59.937 43.478 0.00 0.00 0.00 2.66
302 303 4.269123 CAGTTAGCACACACGACAAAAGTA 59.731 41.667 0.00 0.00 0.00 2.24
303 304 5.050363 CAGTTAGCACACACGACAAAAGTAT 60.050 40.000 0.00 0.00 0.00 2.12
304 305 3.878086 AGCACACACGACAAAAGTATG 57.122 42.857 0.00 0.00 0.00 2.39
305 306 2.032030 AGCACACACGACAAAAGTATGC 60.032 45.455 0.00 0.00 0.00 3.14
306 307 2.286713 GCACACACGACAAAAGTATGCA 60.287 45.455 0.00 0.00 0.00 3.96
307 308 3.609175 GCACACACGACAAAAGTATGCAT 60.609 43.478 3.79 3.79 0.00 3.96
308 309 3.907788 CACACACGACAAAAGTATGCATG 59.092 43.478 10.16 0.00 0.00 4.06
309 310 2.910482 CACACGACAAAAGTATGCATGC 59.090 45.455 11.82 11.82 0.00 4.06
310 311 2.095263 ACACGACAAAAGTATGCATGCC 60.095 45.455 16.68 0.00 0.00 4.40
311 312 2.162208 CACGACAAAAGTATGCATGCCT 59.838 45.455 16.68 8.18 0.00 4.75
312 313 2.162208 ACGACAAAAGTATGCATGCCTG 59.838 45.455 16.68 8.40 0.00 4.85
313 314 2.478370 CGACAAAAGTATGCATGCCTGG 60.478 50.000 16.68 0.00 0.00 4.45
314 315 2.493278 GACAAAAGTATGCATGCCTGGT 59.507 45.455 16.68 1.54 0.00 4.00
315 316 2.493278 ACAAAAGTATGCATGCCTGGTC 59.507 45.455 16.68 1.34 0.00 4.02
316 317 1.382522 AAAGTATGCATGCCTGGTCG 58.617 50.000 16.68 0.00 0.00 4.79
317 318 0.253044 AAGTATGCATGCCTGGTCGT 59.747 50.000 16.68 0.00 0.00 4.34
318 319 0.179073 AGTATGCATGCCTGGTCGTC 60.179 55.000 16.68 0.00 0.00 4.20
319 320 1.227234 TATGCATGCCTGGTCGTCG 60.227 57.895 16.68 0.00 0.00 5.12
320 321 2.642996 TATGCATGCCTGGTCGTCGG 62.643 60.000 16.68 0.00 0.00 4.79
321 322 4.451150 GCATGCCTGGTCGTCGGA 62.451 66.667 6.36 0.00 0.00 4.55
322 323 2.509336 CATGCCTGGTCGTCGGAC 60.509 66.667 0.00 0.00 42.66 4.79
323 324 4.129737 ATGCCTGGTCGTCGGACG 62.130 66.667 23.73 23.73 44.39 4.79
332 333 3.993103 CGTCGGACGAAGCATACC 58.007 61.111 25.29 0.00 46.05 2.73
333 334 1.138036 CGTCGGACGAAGCATACCA 59.862 57.895 25.29 0.00 46.05 3.25
334 335 1.138047 CGTCGGACGAAGCATACCAC 61.138 60.000 25.29 0.00 46.05 4.16
335 336 0.108992 GTCGGACGAAGCATACCACA 60.109 55.000 0.00 0.00 0.00 4.17
336 337 0.821517 TCGGACGAAGCATACCACAT 59.178 50.000 0.00 0.00 0.00 3.21
337 338 1.206132 TCGGACGAAGCATACCACATT 59.794 47.619 0.00 0.00 0.00 2.71
338 339 2.006888 CGGACGAAGCATACCACATTT 58.993 47.619 0.00 0.00 0.00 2.32
339 340 2.418628 CGGACGAAGCATACCACATTTT 59.581 45.455 0.00 0.00 0.00 1.82
340 341 3.119990 CGGACGAAGCATACCACATTTTT 60.120 43.478 0.00 0.00 0.00 1.94
341 342 4.093703 CGGACGAAGCATACCACATTTTTA 59.906 41.667 0.00 0.00 0.00 1.52
342 343 5.220777 CGGACGAAGCATACCACATTTTTAT 60.221 40.000 0.00 0.00 0.00 1.40
343 344 6.560711 GGACGAAGCATACCACATTTTTATT 58.439 36.000 0.00 0.00 0.00 1.40
344 345 6.472163 GGACGAAGCATACCACATTTTTATTG 59.528 38.462 0.00 0.00 0.00 1.90
345 346 6.919721 ACGAAGCATACCACATTTTTATTGT 58.080 32.000 0.00 0.00 0.00 2.71
346 347 8.046294 ACGAAGCATACCACATTTTTATTGTA 57.954 30.769 0.00 0.00 0.00 2.41
347 348 8.682710 ACGAAGCATACCACATTTTTATTGTAT 58.317 29.630 0.00 0.00 0.00 2.29
348 349 8.957028 CGAAGCATACCACATTTTTATTGTATG 58.043 33.333 0.00 0.00 38.87 2.39
349 350 9.248291 GAAGCATACCACATTTTTATTGTATGG 57.752 33.333 0.00 0.00 37.24 2.74
350 351 8.305046 AGCATACCACATTTTTATTGTATGGT 57.695 30.769 0.00 0.00 40.53 3.55
351 352 8.196771 AGCATACCACATTTTTATTGTATGGTG 58.803 33.333 10.31 0.00 42.45 4.17
352 353 7.978975 GCATACCACATTTTTATTGTATGGTGT 59.021 33.333 3.30 0.00 37.24 4.16
353 354 9.515020 CATACCACATTTTTATTGTATGGTGTC 57.485 33.333 3.30 0.00 34.59 3.67
354 355 6.616947 ACCACATTTTTATTGTATGGTGTCG 58.383 36.000 0.00 0.00 0.00 4.35
355 356 6.033341 CCACATTTTTATTGTATGGTGTCGG 58.967 40.000 0.00 0.00 0.00 4.79
356 357 6.349777 CCACATTTTTATTGTATGGTGTCGGT 60.350 38.462 0.00 0.00 0.00 4.69
357 358 7.148222 CCACATTTTTATTGTATGGTGTCGGTA 60.148 37.037 0.00 0.00 0.00 4.02
358 359 8.237949 CACATTTTTATTGTATGGTGTCGGTAA 58.762 33.333 0.00 0.00 0.00 2.85
359 360 8.238631 ACATTTTTATTGTATGGTGTCGGTAAC 58.761 33.333 0.00 0.00 0.00 2.50
360 361 7.982761 TTTTTATTGTATGGTGTCGGTAACT 57.017 32.000 0.00 0.00 0.00 2.24
361 362 7.599630 TTTTATTGTATGGTGTCGGTAACTC 57.400 36.000 0.00 0.00 0.00 3.01
362 363 4.811969 ATTGTATGGTGTCGGTAACTCA 57.188 40.909 0.00 0.00 0.00 3.41
363 364 4.603989 TTGTATGGTGTCGGTAACTCAA 57.396 40.909 0.00 0.00 0.00 3.02
364 365 4.603989 TGTATGGTGTCGGTAACTCAAA 57.396 40.909 0.00 0.00 0.00 2.69
365 366 4.958509 TGTATGGTGTCGGTAACTCAAAA 58.041 39.130 0.00 0.00 0.00 2.44
366 367 5.553123 TGTATGGTGTCGGTAACTCAAAAT 58.447 37.500 0.00 0.00 0.00 1.82
367 368 6.699366 TGTATGGTGTCGGTAACTCAAAATA 58.301 36.000 0.00 0.00 0.00 1.40
368 369 7.160049 TGTATGGTGTCGGTAACTCAAAATAA 58.840 34.615 0.00 0.00 0.00 1.40
369 370 6.737254 ATGGTGTCGGTAACTCAAAATAAG 57.263 37.500 0.00 0.00 0.00 1.73
370 371 4.453136 TGGTGTCGGTAACTCAAAATAAGC 59.547 41.667 0.00 0.00 0.00 3.09
371 372 4.453136 GGTGTCGGTAACTCAAAATAAGCA 59.547 41.667 0.00 0.00 0.00 3.91
372 373 5.123344 GGTGTCGGTAACTCAAAATAAGCAT 59.877 40.000 0.00 0.00 0.00 3.79
373 374 6.248631 GTGTCGGTAACTCAAAATAAGCATC 58.751 40.000 0.00 0.00 0.00 3.91
374 375 5.935206 TGTCGGTAACTCAAAATAAGCATCA 59.065 36.000 0.00 0.00 0.00 3.07
375 376 6.128391 TGTCGGTAACTCAAAATAAGCATCAC 60.128 38.462 0.00 0.00 0.00 3.06
376 377 5.062934 TCGGTAACTCAAAATAAGCATCACG 59.937 40.000 0.00 0.00 0.00 4.35
377 378 5.163893 CGGTAACTCAAAATAAGCATCACGT 60.164 40.000 0.00 0.00 0.00 4.49
378 379 6.021596 GGTAACTCAAAATAAGCATCACGTG 58.978 40.000 9.94 9.94 0.00 4.49
379 380 5.689383 AACTCAAAATAAGCATCACGTGT 57.311 34.783 16.51 0.00 0.00 4.49
380 381 6.795098 AACTCAAAATAAGCATCACGTGTA 57.205 33.333 16.51 2.58 0.00 2.90
381 382 6.165659 ACTCAAAATAAGCATCACGTGTAC 57.834 37.500 16.51 6.28 0.00 2.90
382 383 5.163992 ACTCAAAATAAGCATCACGTGTACG 60.164 40.000 16.51 6.36 46.33 3.67
383 384 4.924462 TCAAAATAAGCATCACGTGTACGA 59.076 37.500 16.51 0.00 43.02 3.43
384 385 5.579119 TCAAAATAAGCATCACGTGTACGAT 59.421 36.000 16.51 0.00 43.02 3.73
385 386 6.752815 TCAAAATAAGCATCACGTGTACGATA 59.247 34.615 16.51 5.60 43.02 2.92
386 387 7.436970 TCAAAATAAGCATCACGTGTACGATAT 59.563 33.333 16.51 7.63 43.02 1.63
387 388 7.709269 AAATAAGCATCACGTGTACGATATT 57.291 32.000 16.51 12.72 43.02 1.28
388 389 7.709269 AATAAGCATCACGTGTACGATATTT 57.291 32.000 16.51 2.56 43.02 1.40
389 390 7.709269 ATAAGCATCACGTGTACGATATTTT 57.291 32.000 16.51 0.78 43.02 1.82
390 391 6.417191 AAGCATCACGTGTACGATATTTTT 57.583 33.333 16.51 0.00 43.02 1.94
391 392 7.528481 AAGCATCACGTGTACGATATTTTTA 57.472 32.000 16.51 0.00 43.02 1.52
392 393 7.161829 AGCATCACGTGTACGATATTTTTAG 57.838 36.000 16.51 0.00 43.02 1.85
393 394 6.755141 AGCATCACGTGTACGATATTTTTAGT 59.245 34.615 16.51 0.00 43.02 2.24
394 395 7.043590 AGCATCACGTGTACGATATTTTTAGTC 60.044 37.037 16.51 0.00 43.02 2.59
395 396 7.253850 GCATCACGTGTACGATATTTTTAGTCA 60.254 37.037 16.51 0.00 43.02 3.41
396 397 8.588789 CATCACGTGTACGATATTTTTAGTCAA 58.411 33.333 16.51 0.00 43.02 3.18
397 398 8.692110 TCACGTGTACGATATTTTTAGTCAAT 57.308 30.769 16.51 0.00 43.02 2.57
398 399 9.142515 TCACGTGTACGATATTTTTAGTCAATT 57.857 29.630 16.51 0.00 43.02 2.32
399 400 9.194716 CACGTGTACGATATTTTTAGTCAATTG 57.805 33.333 11.79 0.00 43.02 2.32
400 401 8.928733 ACGTGTACGATATTTTTAGTCAATTGT 58.071 29.630 11.79 0.00 43.02 2.71
401 402 9.194716 CGTGTACGATATTTTTAGTCAATTGTG 57.805 33.333 5.13 0.00 43.02 3.33
405 406 8.895932 ACGATATTTTTAGTCAATTGTGAAGC 57.104 30.769 5.13 0.00 34.87 3.86
406 407 8.511321 ACGATATTTTTAGTCAATTGTGAAGCA 58.489 29.630 5.13 0.00 34.87 3.91
407 408 8.788813 CGATATTTTTAGTCAATTGTGAAGCAC 58.211 33.333 5.13 0.00 34.87 4.40
408 409 9.624697 GATATTTTTAGTCAATTGTGAAGCACA 57.375 29.630 5.13 0.00 43.02 4.57
409 410 7.935338 ATTTTTAGTCAATTGTGAAGCACAG 57.065 32.000 5.13 0.00 45.39 3.66
410 411 6.691754 TTTTAGTCAATTGTGAAGCACAGA 57.308 33.333 5.13 0.00 45.39 3.41
411 412 5.929697 TTAGTCAATTGTGAAGCACAGAG 57.070 39.130 5.13 0.00 45.39 3.35
412 413 2.551459 AGTCAATTGTGAAGCACAGAGC 59.449 45.455 5.13 0.00 45.39 4.09
413 414 2.291465 GTCAATTGTGAAGCACAGAGCA 59.709 45.455 5.13 0.00 45.39 4.26
414 415 3.057736 GTCAATTGTGAAGCACAGAGCAT 60.058 43.478 5.13 0.00 45.39 3.79
415 416 3.057806 TCAATTGTGAAGCACAGAGCATG 60.058 43.478 5.13 0.00 45.39 4.06
416 417 1.241165 TTGTGAAGCACAGAGCATGG 58.759 50.000 0.00 0.00 45.39 3.66
417 418 2.155048 TTGTGAAGCACAGAGCATGGG 61.155 52.381 0.00 0.00 45.39 4.00
418 419 4.727228 TTGTGAAGCACAGAGCATGGGT 62.727 50.000 0.00 0.00 45.39 4.51
419 420 5.390619 TTGTGAAGCACAGAGCATGGGTA 62.391 47.826 0.00 0.00 45.39 3.69
420 421 6.630283 TTGTGAAGCACAGAGCATGGGTAT 62.630 45.833 0.00 0.00 45.39 2.73
422 423 3.483954 GCACAGAGCATGGGTATGT 57.516 52.632 0.00 0.00 44.79 2.29
424 425 1.671979 CACAGAGCATGGGTATGTGG 58.328 55.000 13.57 0.00 45.50 4.17
425 426 1.065199 CACAGAGCATGGGTATGTGGT 60.065 52.381 13.57 0.00 45.50 4.16
426 427 1.635487 ACAGAGCATGGGTATGTGGTT 59.365 47.619 0.00 0.00 34.20 3.67
427 428 2.041620 ACAGAGCATGGGTATGTGGTTT 59.958 45.455 0.00 0.00 34.20 3.27
428 429 3.091545 CAGAGCATGGGTATGTGGTTTT 58.908 45.455 0.00 0.00 36.65 2.43
429 430 3.511146 CAGAGCATGGGTATGTGGTTTTT 59.489 43.478 0.00 0.00 36.65 1.94
448 449 2.202295 TTTTTCTCCTGTTGCAACGC 57.798 45.000 23.79 2.38 0.00 4.84
449 450 1.098869 TTTTCTCCTGTTGCAACGCA 58.901 45.000 23.79 7.32 36.47 5.24
450 451 0.380378 TTTCTCCTGTTGCAACGCAC 59.620 50.000 23.79 1.83 38.71 5.34
451 452 1.771073 TTCTCCTGTTGCAACGCACG 61.771 55.000 23.79 12.71 38.71 5.34
452 453 3.240606 CTCCTGTTGCAACGCACGG 62.241 63.158 23.79 19.54 38.71 4.94
453 454 4.326766 CCTGTTGCAACGCACGGG 62.327 66.667 23.79 12.20 38.71 5.28
454 455 4.980903 CTGTTGCAACGCACGGGC 62.981 66.667 23.79 0.00 38.71 6.13
1644 6068 2.480555 GCATGCGTCGGTTTCAGG 59.519 61.111 0.00 0.00 0.00 3.86
1847 6285 3.143728 GTCACTCATGGATGCATGCATA 58.856 45.455 32.27 19.00 36.67 3.14
1863 6301 6.127925 TGCATGCATACTAACTCCTTTTTCTG 60.128 38.462 18.46 0.00 0.00 3.02
1934 6372 3.536498 CTGTGCGTTTTGCCCGGAC 62.536 63.158 0.73 0.00 45.36 4.79
1993 6431 2.260844 TGTGGAAAGAAGAGGCACAG 57.739 50.000 0.00 0.00 0.00 3.66
2058 6496 1.864711 TGCTTAGACACGCTCAACAAC 59.135 47.619 0.00 0.00 0.00 3.32
2125 6563 1.697432 TCCCGGGCTACATTTGGATAG 59.303 52.381 18.49 0.00 0.00 2.08
2145 6583 7.710907 TGGATAGAGCTATGTAATGTGTTCAAC 59.289 37.037 0.00 0.00 0.00 3.18
2146 6584 7.171678 GGATAGAGCTATGTAATGTGTTCAACC 59.828 40.741 0.00 0.00 0.00 3.77
2147 6585 5.804639 AGAGCTATGTAATGTGTTCAACCA 58.195 37.500 0.00 0.00 0.00 3.67
2148 6586 6.418101 AGAGCTATGTAATGTGTTCAACCAT 58.582 36.000 0.00 0.00 0.00 3.55
2150 6588 5.294306 AGCTATGTAATGTGTTCAACCATCG 59.706 40.000 0.00 0.00 0.00 3.84
2152 6590 6.017934 GCTATGTAATGTGTTCAACCATCGAT 60.018 38.462 0.00 0.00 0.00 3.59
2153 6591 5.544136 TGTAATGTGTTCAACCATCGATG 57.456 39.130 18.76 18.76 0.00 3.84
2182 6629 7.452880 AAAGTTATTGAAGCATGCTGACTTA 57.547 32.000 23.48 8.70 0.00 2.24
2219 6666 2.509166 TCTCACCTCGAGGAAGCTAA 57.491 50.000 37.69 14.87 42.55 3.09
2263 6723 5.531122 TGGGTTAACGATTGGAGAGATAG 57.469 43.478 0.00 0.00 0.00 2.08
2269 6729 7.435784 GGTTAACGATTGGAGAGATAGAACTTC 59.564 40.741 0.00 0.00 0.00 3.01
2317 6784 3.257127 TCTTGGTGATGTCATGTGTACGA 59.743 43.478 0.00 0.00 0.00 3.43
2319 6786 2.560981 TGGTGATGTCATGTGTACGAGT 59.439 45.455 0.00 0.00 0.00 4.18
2322 6789 4.424626 GTGATGTCATGTGTACGAGTCAT 58.575 43.478 0.00 0.00 0.00 3.06
2374 7286 2.724977 TTCAGACTTCTAGTGCACGG 57.275 50.000 12.01 8.85 0.00 4.94
2448 7360 8.275015 TCATCAGTATCTAGCTTATCACTAGC 57.725 38.462 0.00 0.00 37.60 3.42
2451 7363 9.967451 ATCAGTATCTAGCTTATCACTAGCTTA 57.033 33.333 2.39 0.00 46.42 3.09
2459 7371 4.442192 GCTTATCACTAGCTTAGCAGTGGT 60.442 45.833 24.89 22.55 37.84 4.16
2460 7372 3.533606 ATCACTAGCTTAGCAGTGGTG 57.466 47.619 24.89 16.21 37.84 4.17
2464 7376 0.530744 TAGCTTAGCAGTGGTGTCGG 59.469 55.000 7.07 0.00 0.00 4.79
2475 7387 2.212110 GGTGTCGGGGTAGTGGTGT 61.212 63.158 0.00 0.00 0.00 4.16
2476 7388 1.005394 GTGTCGGGGTAGTGGTGTG 60.005 63.158 0.00 0.00 0.00 3.82
2541 7605 4.337060 CCCGCAGACACGTCGTGA 62.337 66.667 30.95 0.00 36.96 4.35
2569 7633 1.011242 CACGTTGGTGTTGTCAGCG 60.011 57.895 0.00 0.00 43.99 5.18
2611 8564 0.109272 AGTCGATGTTCACGATGCGT 60.109 50.000 0.00 0.00 42.36 5.24
2657 8610 1.065199 ACACATCGTGGATGAAGGCAT 60.065 47.619 12.22 0.00 42.09 4.40
2696 8649 1.686587 CCGGGCATACATAGACAGACA 59.313 52.381 0.00 0.00 0.00 3.41
2730 8683 0.744414 GATGCGCTGCTCCAGGTTTA 60.744 55.000 9.73 0.00 31.21 2.01
2745 8698 4.565028 CCAGGTTTACCAGTCCTAAGAACC 60.565 50.000 1.13 0.00 38.89 3.62
2748 8701 1.856629 TACCAGTCCTAAGAACCCGG 58.143 55.000 0.00 0.00 0.00 5.73
2825 9013 1.742880 CTGCACACCATGTCGAGGG 60.743 63.158 0.00 0.00 0.00 4.30
2843 9031 0.617820 GGGGGTTAGCAGAGGACTCA 60.618 60.000 1.75 0.00 0.00 3.41
2845 9033 1.066071 GGGGTTAGCAGAGGACTCAAC 60.066 57.143 1.75 0.00 0.00 3.18
2898 9131 1.635663 GAAGGTGCCGATGTTGACCG 61.636 60.000 0.00 0.00 33.39 4.79
2900 9133 4.147322 GTGCCGATGTTGACCGCG 62.147 66.667 0.00 0.00 0.00 6.46
2904 9137 2.474266 CGATGTTGACCGCGGTTG 59.526 61.111 34.65 8.30 0.00 3.77
2924 9157 6.196724 CGGTTGTCGAAGTAGATTAAGTGATC 59.803 42.308 0.00 0.00 42.43 2.92
2948 9181 0.100682 TAGATGACGAAGACGCTGGC 59.899 55.000 0.00 0.00 43.96 4.85
2955 9188 1.427020 GAAGACGCTGGCAATGAGC 59.573 57.895 0.00 0.00 44.65 4.26
2978 9211 2.972505 CTGCACAACGGCGAAGGT 60.973 61.111 16.62 5.35 36.28 3.50
3037 9270 1.672356 GCGCCAAGGAAGAAGAGCA 60.672 57.895 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 8.960064 ACTCCCTCCATTCCAAAATATAAGTAT 58.040 33.333 0.00 0.00 0.00 2.12
6 7 7.226059 ACTCCCTCCATTCCAAAATATAAGT 57.774 36.000 0.00 0.00 0.00 2.24
7 8 9.640952 TTTACTCCCTCCATTCCAAAATATAAG 57.359 33.333 0.00 0.00 0.00 1.73
9 10 9.807921 GATTTACTCCCTCCATTCCAAAATATA 57.192 33.333 0.00 0.00 0.00 0.86
10 11 8.288812 TGATTTACTCCCTCCATTCCAAAATAT 58.711 33.333 0.00 0.00 0.00 1.28
11 12 7.647827 TGATTTACTCCCTCCATTCCAAAATA 58.352 34.615 0.00 0.00 0.00 1.40
12 13 6.502138 TGATTTACTCCCTCCATTCCAAAAT 58.498 36.000 0.00 0.00 0.00 1.82
13 14 5.898120 TGATTTACTCCCTCCATTCCAAAA 58.102 37.500 0.00 0.00 0.00 2.44
14 15 5.528600 TGATTTACTCCCTCCATTCCAAA 57.471 39.130 0.00 0.00 0.00 3.28
15 16 5.732331 ATGATTTACTCCCTCCATTCCAA 57.268 39.130 0.00 0.00 0.00 3.53
16 17 6.150332 TCTATGATTTACTCCCTCCATTCCA 58.850 40.000 0.00 0.00 0.00 3.53
17 18 6.688073 TCTATGATTTACTCCCTCCATTCC 57.312 41.667 0.00 0.00 0.00 3.01
18 19 8.841300 GTTTTCTATGATTTACTCCCTCCATTC 58.159 37.037 0.00 0.00 0.00 2.67
19 20 8.560903 AGTTTTCTATGATTTACTCCCTCCATT 58.439 33.333 0.00 0.00 0.00 3.16
20 21 8.107196 AGTTTTCTATGATTTACTCCCTCCAT 57.893 34.615 0.00 0.00 0.00 3.41
21 22 7.403231 AGAGTTTTCTATGATTTACTCCCTCCA 59.597 37.037 0.00 0.00 34.10 3.86
22 23 7.797062 AGAGTTTTCTATGATTTACTCCCTCC 58.203 38.462 0.00 0.00 34.10 4.30
23 24 8.478877 TGAGAGTTTTCTATGATTTACTCCCTC 58.521 37.037 0.00 0.00 34.10 4.30
24 25 8.380742 TGAGAGTTTTCTATGATTTACTCCCT 57.619 34.615 0.00 0.00 34.10 4.20
25 26 9.050601 CATGAGAGTTTTCTATGATTTACTCCC 57.949 37.037 0.00 0.00 34.10 4.30
26 27 9.823647 TCATGAGAGTTTTCTATGATTTACTCC 57.176 33.333 0.00 0.00 34.10 3.85
30 31 9.113838 GCCTTCATGAGAGTTTTCTATGATTTA 57.886 33.333 0.00 0.00 32.53 1.40
31 32 7.613022 TGCCTTCATGAGAGTTTTCTATGATTT 59.387 33.333 0.00 0.00 32.53 2.17
32 33 7.114754 TGCCTTCATGAGAGTTTTCTATGATT 58.885 34.615 0.00 0.00 32.53 2.57
33 34 6.656902 TGCCTTCATGAGAGTTTTCTATGAT 58.343 36.000 0.00 0.00 32.53 2.45
34 35 6.053632 TGCCTTCATGAGAGTTTTCTATGA 57.946 37.500 0.00 0.00 32.53 2.15
35 36 6.677431 GCTTGCCTTCATGAGAGTTTTCTATG 60.677 42.308 0.00 0.00 32.53 2.23
36 37 5.356470 GCTTGCCTTCATGAGAGTTTTCTAT 59.644 40.000 0.00 0.00 32.53 1.98
37 38 4.697352 GCTTGCCTTCATGAGAGTTTTCTA 59.303 41.667 0.00 0.00 32.53 2.10
38 39 3.505293 GCTTGCCTTCATGAGAGTTTTCT 59.495 43.478 0.00 0.00 36.01 2.52
39 40 3.254166 TGCTTGCCTTCATGAGAGTTTTC 59.746 43.478 0.00 0.00 0.00 2.29
40 41 3.225104 TGCTTGCCTTCATGAGAGTTTT 58.775 40.909 0.00 0.00 0.00 2.43
41 42 2.867624 TGCTTGCCTTCATGAGAGTTT 58.132 42.857 0.00 0.00 0.00 2.66
42 43 2.574006 TGCTTGCCTTCATGAGAGTT 57.426 45.000 0.00 0.00 0.00 3.01
43 44 2.574006 TTGCTTGCCTTCATGAGAGT 57.426 45.000 0.00 0.00 0.00 3.24
44 45 4.174009 CAAATTGCTTGCCTTCATGAGAG 58.826 43.478 0.00 0.00 0.00 3.20
45 46 3.056393 CCAAATTGCTTGCCTTCATGAGA 60.056 43.478 0.00 0.00 33.27 3.27
46 47 3.259064 CCAAATTGCTTGCCTTCATGAG 58.741 45.455 0.00 0.00 33.27 2.90
47 48 2.027929 CCCAAATTGCTTGCCTTCATGA 60.028 45.455 0.00 0.00 33.27 3.07
48 49 2.289819 ACCCAAATTGCTTGCCTTCATG 60.290 45.455 0.00 0.00 33.27 3.07
49 50 1.980036 ACCCAAATTGCTTGCCTTCAT 59.020 42.857 0.00 0.00 33.27 2.57
50 51 1.422531 ACCCAAATTGCTTGCCTTCA 58.577 45.000 0.00 0.00 33.27 3.02
51 52 2.145536 CAACCCAAATTGCTTGCCTTC 58.854 47.619 0.00 0.00 33.27 3.46
52 53 2.259266 CAACCCAAATTGCTTGCCTT 57.741 45.000 0.00 0.00 33.27 4.35
60 61 3.007182 ACTGGAGATTGCAACCCAAATTG 59.993 43.478 15.24 8.37 36.92 2.32
61 62 3.242011 ACTGGAGATTGCAACCCAAATT 58.758 40.909 15.24 3.84 36.92 1.82
62 63 2.827921 GACTGGAGATTGCAACCCAAAT 59.172 45.455 15.24 8.66 36.92 2.32
63 64 2.238521 GACTGGAGATTGCAACCCAAA 58.761 47.619 15.24 0.00 36.92 3.28
64 65 1.144708 TGACTGGAGATTGCAACCCAA 59.855 47.619 15.24 2.17 37.94 4.12
65 66 0.770499 TGACTGGAGATTGCAACCCA 59.230 50.000 0.00 9.06 0.00 4.51
66 67 1.747355 CATGACTGGAGATTGCAACCC 59.253 52.381 0.00 4.21 0.00 4.11
67 68 2.715046 TCATGACTGGAGATTGCAACC 58.285 47.619 0.00 0.00 0.00 3.77
68 69 4.669318 CATTCATGACTGGAGATTGCAAC 58.331 43.478 0.00 0.00 0.00 4.17
69 70 3.129813 GCATTCATGACTGGAGATTGCAA 59.870 43.478 14.23 0.00 38.10 4.08
70 71 2.686405 GCATTCATGACTGGAGATTGCA 59.314 45.455 14.23 0.00 38.10 4.08
71 72 2.950309 AGCATTCATGACTGGAGATTGC 59.050 45.455 14.23 5.40 38.33 3.56
72 73 4.755629 CCTAGCATTCATGACTGGAGATTG 59.244 45.833 14.23 0.00 0.00 2.67
73 74 4.202440 CCCTAGCATTCATGACTGGAGATT 60.202 45.833 14.23 0.00 0.00 2.40
74 75 3.327172 CCCTAGCATTCATGACTGGAGAT 59.673 47.826 14.23 0.00 0.00 2.75
75 76 2.702478 CCCTAGCATTCATGACTGGAGA 59.298 50.000 14.23 0.00 0.00 3.71
76 77 2.702478 TCCCTAGCATTCATGACTGGAG 59.298 50.000 14.23 0.38 0.00 3.86
77 78 2.763039 TCCCTAGCATTCATGACTGGA 58.237 47.619 14.23 0.64 0.00 3.86
78 79 3.209410 GTTCCCTAGCATTCATGACTGG 58.791 50.000 14.23 2.13 0.00 4.00
79 80 3.877559 TGTTCCCTAGCATTCATGACTG 58.122 45.455 8.63 8.63 0.00 3.51
80 81 4.574674 TTGTTCCCTAGCATTCATGACT 57.425 40.909 0.00 0.00 0.00 3.41
81 82 4.943705 TCTTTGTTCCCTAGCATTCATGAC 59.056 41.667 0.00 0.00 0.00 3.06
82 83 5.178096 TCTTTGTTCCCTAGCATTCATGA 57.822 39.130 0.00 0.00 0.00 3.07
83 84 5.416952 ACTTCTTTGTTCCCTAGCATTCATG 59.583 40.000 0.00 0.00 0.00 3.07
84 85 5.574188 ACTTCTTTGTTCCCTAGCATTCAT 58.426 37.500 0.00 0.00 0.00 2.57
85 86 4.985538 ACTTCTTTGTTCCCTAGCATTCA 58.014 39.130 0.00 0.00 0.00 2.57
86 87 7.306213 GTTTACTTCTTTGTTCCCTAGCATTC 58.694 38.462 0.00 0.00 0.00 2.67
87 88 6.072673 CGTTTACTTCTTTGTTCCCTAGCATT 60.073 38.462 0.00 0.00 0.00 3.56
88 89 5.411669 CGTTTACTTCTTTGTTCCCTAGCAT 59.588 40.000 0.00 0.00 0.00 3.79
89 90 4.753107 CGTTTACTTCTTTGTTCCCTAGCA 59.247 41.667 0.00 0.00 0.00 3.49
90 91 4.992951 TCGTTTACTTCTTTGTTCCCTAGC 59.007 41.667 0.00 0.00 0.00 3.42
91 92 6.453092 TCTCGTTTACTTCTTTGTTCCCTAG 58.547 40.000 0.00 0.00 0.00 3.02
92 93 6.409524 TCTCGTTTACTTCTTTGTTCCCTA 57.590 37.500 0.00 0.00 0.00 3.53
93 94 5.286267 TCTCGTTTACTTCTTTGTTCCCT 57.714 39.130 0.00 0.00 0.00 4.20
94 95 7.095270 TCTATCTCGTTTACTTCTTTGTTCCC 58.905 38.462 0.00 0.00 0.00 3.97
95 96 8.027771 TCTCTATCTCGTTTACTTCTTTGTTCC 58.972 37.037 0.00 0.00 0.00 3.62
96 97 8.967552 TCTCTATCTCGTTTACTTCTTTGTTC 57.032 34.615 0.00 0.00 0.00 3.18
97 98 7.542824 GCTCTCTATCTCGTTTACTTCTTTGTT 59.457 37.037 0.00 0.00 0.00 2.83
98 99 7.030768 GCTCTCTATCTCGTTTACTTCTTTGT 58.969 38.462 0.00 0.00 0.00 2.83
99 100 6.195613 CGCTCTCTATCTCGTTTACTTCTTTG 59.804 42.308 0.00 0.00 0.00 2.77
100 101 6.127952 ACGCTCTCTATCTCGTTTACTTCTTT 60.128 38.462 0.00 0.00 0.00 2.52
101 102 5.354792 ACGCTCTCTATCTCGTTTACTTCTT 59.645 40.000 0.00 0.00 0.00 2.52
102 103 4.877251 ACGCTCTCTATCTCGTTTACTTCT 59.123 41.667 0.00 0.00 0.00 2.85
103 104 5.159399 ACGCTCTCTATCTCGTTTACTTC 57.841 43.478 0.00 0.00 0.00 3.01
104 105 5.564048 AACGCTCTCTATCTCGTTTACTT 57.436 39.130 0.00 0.00 41.61 2.24
105 106 5.236911 CCTAACGCTCTCTATCTCGTTTACT 59.763 44.000 4.23 0.00 43.62 2.24
106 107 5.442402 CCTAACGCTCTCTATCTCGTTTAC 58.558 45.833 4.23 0.00 43.62 2.01
107 108 4.024218 GCCTAACGCTCTCTATCTCGTTTA 60.024 45.833 4.23 0.00 43.62 2.01
108 109 3.243134 GCCTAACGCTCTCTATCTCGTTT 60.243 47.826 4.23 0.00 43.62 3.60
109 110 2.291190 GCCTAACGCTCTCTATCTCGTT 59.709 50.000 4.35 4.35 45.46 3.85
110 111 1.874872 GCCTAACGCTCTCTATCTCGT 59.125 52.381 0.00 0.00 36.67 4.18
111 112 1.874231 TGCCTAACGCTCTCTATCTCG 59.126 52.381 0.00 0.00 38.78 4.04
112 113 3.366883 CCATGCCTAACGCTCTCTATCTC 60.367 52.174 0.00 0.00 38.78 2.75
113 114 2.560542 CCATGCCTAACGCTCTCTATCT 59.439 50.000 0.00 0.00 38.78 1.98
114 115 2.558795 TCCATGCCTAACGCTCTCTATC 59.441 50.000 0.00 0.00 38.78 2.08
115 116 2.598565 TCCATGCCTAACGCTCTCTAT 58.401 47.619 0.00 0.00 38.78 1.98
116 117 2.067365 TCCATGCCTAACGCTCTCTA 57.933 50.000 0.00 0.00 38.78 2.43
117 118 1.069823 CATCCATGCCTAACGCTCTCT 59.930 52.381 0.00 0.00 38.78 3.10
118 119 1.506493 CATCCATGCCTAACGCTCTC 58.494 55.000 0.00 0.00 38.78 3.20
119 120 0.107456 CCATCCATGCCTAACGCTCT 59.893 55.000 0.00 0.00 38.78 4.09
120 121 1.510480 GCCATCCATGCCTAACGCTC 61.510 60.000 0.00 0.00 38.78 5.03
121 122 1.526917 GCCATCCATGCCTAACGCT 60.527 57.895 0.00 0.00 38.78 5.07
122 123 2.555547 GGCCATCCATGCCTAACGC 61.556 63.158 0.00 0.00 45.70 4.84
123 124 3.749981 GGCCATCCATGCCTAACG 58.250 61.111 0.00 0.00 45.70 3.18
133 134 2.417243 CGGTTTTTCTTCATGGCCATCC 60.417 50.000 17.61 9.82 0.00 3.51
134 135 2.417243 CCGGTTTTTCTTCATGGCCATC 60.417 50.000 17.61 0.28 0.00 3.51
135 136 1.550072 CCGGTTTTTCTTCATGGCCAT 59.450 47.619 14.09 14.09 0.00 4.40
136 137 0.965439 CCGGTTTTTCTTCATGGCCA 59.035 50.000 8.56 8.56 0.00 5.36
137 138 1.253100 TCCGGTTTTTCTTCATGGCC 58.747 50.000 0.00 0.00 0.00 5.36
138 139 3.378911 TTTCCGGTTTTTCTTCATGGC 57.621 42.857 0.00 0.00 0.00 4.40
139 140 5.356426 AGTTTTTCCGGTTTTTCTTCATGG 58.644 37.500 0.00 0.00 0.00 3.66
140 141 7.995463 TTAGTTTTTCCGGTTTTTCTTCATG 57.005 32.000 0.00 0.00 0.00 3.07
141 142 9.093970 CTTTTAGTTTTTCCGGTTTTTCTTCAT 57.906 29.630 0.00 0.00 0.00 2.57
142 143 8.305317 TCTTTTAGTTTTTCCGGTTTTTCTTCA 58.695 29.630 0.00 0.00 0.00 3.02
143 144 8.692110 TCTTTTAGTTTTTCCGGTTTTTCTTC 57.308 30.769 0.00 0.00 0.00 2.87
144 145 7.277098 GCTCTTTTAGTTTTTCCGGTTTTTCTT 59.723 33.333 0.00 0.00 0.00 2.52
145 146 6.755141 GCTCTTTTAGTTTTTCCGGTTTTTCT 59.245 34.615 0.00 0.00 0.00 2.52
146 147 6.532302 TGCTCTTTTAGTTTTTCCGGTTTTTC 59.468 34.615 0.00 0.00 0.00 2.29
147 148 6.399743 TGCTCTTTTAGTTTTTCCGGTTTTT 58.600 32.000 0.00 0.00 0.00 1.94
148 149 5.968254 TGCTCTTTTAGTTTTTCCGGTTTT 58.032 33.333 0.00 0.00 0.00 2.43
149 150 5.585820 TGCTCTTTTAGTTTTTCCGGTTT 57.414 34.783 0.00 0.00 0.00 3.27
150 151 5.345702 GTTGCTCTTTTAGTTTTTCCGGTT 58.654 37.500 0.00 0.00 0.00 4.44
151 152 4.496840 CGTTGCTCTTTTAGTTTTTCCGGT 60.497 41.667 0.00 0.00 0.00 5.28
152 153 3.972502 CGTTGCTCTTTTAGTTTTTCCGG 59.027 43.478 0.00 0.00 0.00 5.14
153 154 4.436523 CACGTTGCTCTTTTAGTTTTTCCG 59.563 41.667 0.00 0.00 0.00 4.30
154 155 5.575019 TCACGTTGCTCTTTTAGTTTTTCC 58.425 37.500 0.00 0.00 0.00 3.13
155 156 6.291112 GCTTCACGTTGCTCTTTTAGTTTTTC 60.291 38.462 0.00 0.00 0.00 2.29
156 157 5.515270 GCTTCACGTTGCTCTTTTAGTTTTT 59.485 36.000 0.00 0.00 0.00 1.94
157 158 5.034797 GCTTCACGTTGCTCTTTTAGTTTT 58.965 37.500 0.00 0.00 0.00 2.43
158 159 4.497507 GGCTTCACGTTGCTCTTTTAGTTT 60.498 41.667 5.19 0.00 0.00 2.66
159 160 3.003378 GGCTTCACGTTGCTCTTTTAGTT 59.997 43.478 5.19 0.00 0.00 2.24
160 161 2.548480 GGCTTCACGTTGCTCTTTTAGT 59.452 45.455 5.19 0.00 0.00 2.24
161 162 2.548057 TGGCTTCACGTTGCTCTTTTAG 59.452 45.455 5.19 0.00 0.00 1.85
162 163 2.566913 TGGCTTCACGTTGCTCTTTTA 58.433 42.857 5.19 0.00 0.00 1.52
163 164 1.388547 TGGCTTCACGTTGCTCTTTT 58.611 45.000 5.19 0.00 0.00 2.27
164 165 1.388547 TTGGCTTCACGTTGCTCTTT 58.611 45.000 5.19 0.00 0.00 2.52
165 166 1.537202 GATTGGCTTCACGTTGCTCTT 59.463 47.619 5.19 0.00 0.00 2.85
166 167 1.160137 GATTGGCTTCACGTTGCTCT 58.840 50.000 5.19 0.00 0.00 4.09
167 168 0.874390 TGATTGGCTTCACGTTGCTC 59.126 50.000 5.19 0.00 0.00 4.26
168 169 1.001378 GTTGATTGGCTTCACGTTGCT 60.001 47.619 5.19 0.00 0.00 3.91
169 170 1.268999 TGTTGATTGGCTTCACGTTGC 60.269 47.619 0.00 0.00 0.00 4.17
170 171 2.772568 TGTTGATTGGCTTCACGTTG 57.227 45.000 0.00 0.00 0.00 4.10
171 172 3.791973 TTTGTTGATTGGCTTCACGTT 57.208 38.095 0.00 0.00 0.00 3.99
172 173 3.119316 TGTTTTGTTGATTGGCTTCACGT 60.119 39.130 0.00 0.00 0.00 4.49
173 174 3.443037 TGTTTTGTTGATTGGCTTCACG 58.557 40.909 0.00 0.00 0.00 4.35
174 175 5.793026 TTTGTTTTGTTGATTGGCTTCAC 57.207 34.783 0.00 0.00 0.00 3.18
175 176 6.169094 TCTTTTGTTTTGTTGATTGGCTTCA 58.831 32.000 0.00 0.00 0.00 3.02
176 177 6.660887 TCTTTTGTTTTGTTGATTGGCTTC 57.339 33.333 0.00 0.00 0.00 3.86
177 178 6.654582 AGTTCTTTTGTTTTGTTGATTGGCTT 59.345 30.769 0.00 0.00 0.00 4.35
178 179 6.172630 AGTTCTTTTGTTTTGTTGATTGGCT 58.827 32.000 0.00 0.00 0.00 4.75
179 180 6.421377 AGTTCTTTTGTTTTGTTGATTGGC 57.579 33.333 0.00 0.00 0.00 4.52
180 181 9.971744 CTTTAGTTCTTTTGTTTTGTTGATTGG 57.028 29.630 0.00 0.00 0.00 3.16
189 190 9.378551 GGGTTGAATCTTTAGTTCTTTTGTTTT 57.621 29.630 0.00 0.00 0.00 2.43
190 191 8.536175 TGGGTTGAATCTTTAGTTCTTTTGTTT 58.464 29.630 0.00 0.00 0.00 2.83
191 192 8.073467 TGGGTTGAATCTTTAGTTCTTTTGTT 57.927 30.769 0.00 0.00 0.00 2.83
192 193 7.342026 ACTGGGTTGAATCTTTAGTTCTTTTGT 59.658 33.333 0.00 0.00 0.00 2.83
193 194 7.716612 ACTGGGTTGAATCTTTAGTTCTTTTG 58.283 34.615 0.00 0.00 0.00 2.44
194 195 7.898014 ACTGGGTTGAATCTTTAGTTCTTTT 57.102 32.000 0.00 0.00 0.00 2.27
195 196 7.684428 GCAACTGGGTTGAATCTTTAGTTCTTT 60.684 37.037 13.63 0.00 45.28 2.52
196 197 6.239036 GCAACTGGGTTGAATCTTTAGTTCTT 60.239 38.462 13.63 0.00 45.28 2.52
197 198 5.241728 GCAACTGGGTTGAATCTTTAGTTCT 59.758 40.000 13.63 0.00 45.28 3.01
198 199 5.009610 TGCAACTGGGTTGAATCTTTAGTTC 59.990 40.000 13.63 0.00 45.28 3.01
199 200 4.892934 TGCAACTGGGTTGAATCTTTAGTT 59.107 37.500 13.63 0.00 45.28 2.24
200 201 4.469657 TGCAACTGGGTTGAATCTTTAGT 58.530 39.130 13.63 0.00 45.28 2.24
201 202 5.452078 TTGCAACTGGGTTGAATCTTTAG 57.548 39.130 13.63 0.00 45.28 1.85
202 203 5.860941 TTTGCAACTGGGTTGAATCTTTA 57.139 34.783 13.63 0.00 45.28 1.85
203 204 4.751767 TTTGCAACTGGGTTGAATCTTT 57.248 36.364 13.63 0.00 45.28 2.52
204 205 4.751767 TTTTGCAACTGGGTTGAATCTT 57.248 36.364 13.63 0.00 45.28 2.40
205 206 4.751767 TTTTTGCAACTGGGTTGAATCT 57.248 36.364 13.63 0.00 45.28 2.40
225 226 9.561069 ACTTTCTGTTCTATTGTGTACATCTTT 57.439 29.630 0.00 0.00 0.00 2.52
226 227 9.561069 AACTTTCTGTTCTATTGTGTACATCTT 57.439 29.630 0.00 0.00 32.63 2.40
233 234 8.958119 TGTTCTAACTTTCTGTTCTATTGTGT 57.042 30.769 0.00 0.00 39.89 3.72
240 241 9.429359 CATGTAGATGTTCTAACTTTCTGTTCT 57.571 33.333 8.31 0.00 39.89 3.01
241 242 9.424319 TCATGTAGATGTTCTAACTTTCTGTTC 57.576 33.333 0.00 0.00 39.89 3.18
242 243 9.209175 GTCATGTAGATGTTCTAACTTTCTGTT 57.791 33.333 0.00 0.00 42.31 3.16
243 244 8.367911 TGTCATGTAGATGTTCTAACTTTCTGT 58.632 33.333 0.00 0.00 29.58 3.41
244 245 8.763049 TGTCATGTAGATGTTCTAACTTTCTG 57.237 34.615 0.00 0.00 29.58 3.02
245 246 9.429359 CTTGTCATGTAGATGTTCTAACTTTCT 57.571 33.333 0.00 0.42 29.58 2.52
246 247 9.209175 ACTTGTCATGTAGATGTTCTAACTTTC 57.791 33.333 0.00 0.00 29.58 2.62
248 249 9.640963 GTACTTGTCATGTAGATGTTCTAACTT 57.359 33.333 0.00 0.00 29.58 2.66
249 250 9.026121 AGTACTTGTCATGTAGATGTTCTAACT 57.974 33.333 0.00 0.00 29.58 2.24
250 251 9.640963 AAGTACTTGTCATGTAGATGTTCTAAC 57.359 33.333 7.48 0.00 29.58 2.34
251 252 9.856488 GAAGTACTTGTCATGTAGATGTTCTAA 57.144 33.333 14.14 0.00 29.58 2.10
252 253 9.020731 TGAAGTACTTGTCATGTAGATGTTCTA 57.979 33.333 14.14 0.00 0.00 2.10
253 254 7.815068 GTGAAGTACTTGTCATGTAGATGTTCT 59.185 37.037 14.14 0.00 0.00 3.01
254 255 7.598869 TGTGAAGTACTTGTCATGTAGATGTTC 59.401 37.037 14.14 0.00 0.00 3.18
255 256 7.441836 TGTGAAGTACTTGTCATGTAGATGTT 58.558 34.615 14.14 0.00 0.00 2.71
256 257 6.993079 TGTGAAGTACTTGTCATGTAGATGT 58.007 36.000 14.14 0.00 0.00 3.06
257 258 7.093354 ACTGTGAAGTACTTGTCATGTAGATG 58.907 38.462 14.14 0.00 0.00 2.90
258 259 7.233389 ACTGTGAAGTACTTGTCATGTAGAT 57.767 36.000 14.14 0.00 0.00 1.98
259 260 6.650427 ACTGTGAAGTACTTGTCATGTAGA 57.350 37.500 14.14 0.00 0.00 2.59
260 261 7.062371 GCTAACTGTGAAGTACTTGTCATGTAG 59.938 40.741 14.14 14.30 0.00 2.74
261 262 6.866770 GCTAACTGTGAAGTACTTGTCATGTA 59.133 38.462 14.14 6.18 0.00 2.29
262 263 5.696724 GCTAACTGTGAAGTACTTGTCATGT 59.303 40.000 14.14 6.60 0.00 3.21
263 264 5.696270 TGCTAACTGTGAAGTACTTGTCATG 59.304 40.000 14.14 6.01 0.00 3.07
264 265 5.696724 GTGCTAACTGTGAAGTACTTGTCAT 59.303 40.000 14.14 1.11 0.00 3.06
265 266 5.047847 GTGCTAACTGTGAAGTACTTGTCA 58.952 41.667 14.14 10.55 0.00 3.58
266 267 5.047847 TGTGCTAACTGTGAAGTACTTGTC 58.952 41.667 14.14 6.28 30.61 3.18
267 268 4.809426 GTGTGCTAACTGTGAAGTACTTGT 59.191 41.667 14.14 1.25 30.61 3.16
268 269 4.808895 TGTGTGCTAACTGTGAAGTACTTG 59.191 41.667 14.14 0.54 30.61 3.16
269 270 4.809426 GTGTGTGCTAACTGTGAAGTACTT 59.191 41.667 8.13 8.13 30.61 2.24
270 271 4.369182 GTGTGTGCTAACTGTGAAGTACT 58.631 43.478 11.12 0.00 30.61 2.73
271 272 3.181774 CGTGTGTGCTAACTGTGAAGTAC 59.818 47.826 5.18 5.18 0.00 2.73
272 273 3.067040 TCGTGTGTGCTAACTGTGAAGTA 59.933 43.478 0.00 0.00 0.00 2.24
273 274 2.159156 TCGTGTGTGCTAACTGTGAAGT 60.159 45.455 0.00 0.00 0.00 3.01
274 275 2.218759 GTCGTGTGTGCTAACTGTGAAG 59.781 50.000 0.00 0.00 0.00 3.02
275 276 2.198406 GTCGTGTGTGCTAACTGTGAA 58.802 47.619 0.00 0.00 0.00 3.18
276 277 1.135333 TGTCGTGTGTGCTAACTGTGA 59.865 47.619 0.00 0.00 0.00 3.58
277 278 1.566404 TGTCGTGTGTGCTAACTGTG 58.434 50.000 0.00 0.00 0.00 3.66
278 279 2.303163 TTGTCGTGTGTGCTAACTGT 57.697 45.000 0.00 0.00 0.00 3.55
279 280 3.063452 ACTTTTGTCGTGTGTGCTAACTG 59.937 43.478 0.00 0.00 0.00 3.16
280 281 3.267483 ACTTTTGTCGTGTGTGCTAACT 58.733 40.909 0.00 0.00 0.00 2.24
281 282 3.668596 ACTTTTGTCGTGTGTGCTAAC 57.331 42.857 0.00 0.00 0.00 2.34
282 283 4.319190 GCATACTTTTGTCGTGTGTGCTAA 60.319 41.667 0.00 0.00 42.65 3.09
283 284 3.185594 GCATACTTTTGTCGTGTGTGCTA 59.814 43.478 0.00 0.00 42.65 3.49
284 285 2.032030 GCATACTTTTGTCGTGTGTGCT 60.032 45.455 0.00 0.00 42.65 4.40
285 286 2.286713 TGCATACTTTTGTCGTGTGTGC 60.287 45.455 7.04 7.04 44.93 4.57
286 287 3.600717 TGCATACTTTTGTCGTGTGTG 57.399 42.857 0.00 0.00 0.00 3.82
287 288 3.609175 GCATGCATACTTTTGTCGTGTGT 60.609 43.478 14.21 0.00 0.00 3.72
288 289 2.910482 GCATGCATACTTTTGTCGTGTG 59.090 45.455 14.21 0.00 0.00 3.82
289 290 2.095263 GGCATGCATACTTTTGTCGTGT 60.095 45.455 21.36 0.00 0.00 4.49
290 291 2.162208 AGGCATGCATACTTTTGTCGTG 59.838 45.455 21.36 0.00 0.00 4.35
291 292 2.162208 CAGGCATGCATACTTTTGTCGT 59.838 45.455 21.36 0.00 0.00 4.34
292 293 2.478370 CCAGGCATGCATACTTTTGTCG 60.478 50.000 21.36 0.00 0.00 4.35
293 294 2.493278 ACCAGGCATGCATACTTTTGTC 59.507 45.455 21.36 0.00 0.00 3.18
294 295 2.493278 GACCAGGCATGCATACTTTTGT 59.507 45.455 21.36 4.36 0.00 2.83
295 296 2.478370 CGACCAGGCATGCATACTTTTG 60.478 50.000 21.36 0.00 0.00 2.44
296 297 1.745087 CGACCAGGCATGCATACTTTT 59.255 47.619 21.36 0.00 0.00 2.27
297 298 1.340017 ACGACCAGGCATGCATACTTT 60.340 47.619 21.36 0.00 0.00 2.66
298 299 0.253044 ACGACCAGGCATGCATACTT 59.747 50.000 21.36 0.00 0.00 2.24
299 300 0.179073 GACGACCAGGCATGCATACT 60.179 55.000 21.36 4.35 0.00 2.12
300 301 1.490693 CGACGACCAGGCATGCATAC 61.491 60.000 21.36 6.66 0.00 2.39
301 302 1.227234 CGACGACCAGGCATGCATA 60.227 57.895 21.36 0.00 0.00 3.14
302 303 2.512286 CGACGACCAGGCATGCAT 60.512 61.111 21.36 10.32 0.00 3.96
303 304 4.758251 CCGACGACCAGGCATGCA 62.758 66.667 21.36 0.00 0.00 3.96
304 305 4.451150 TCCGACGACCAGGCATGC 62.451 66.667 9.90 9.90 0.00 4.06
305 306 2.509336 GTCCGACGACCAGGCATG 60.509 66.667 0.00 0.00 32.40 4.06
306 307 4.129737 CGTCCGACGACCAGGCAT 62.130 66.667 16.03 0.00 46.05 4.40
315 316 1.138036 TGGTATGCTTCGTCCGACG 59.862 57.895 14.94 14.94 44.19 5.12
316 317 0.108992 TGTGGTATGCTTCGTCCGAC 60.109 55.000 0.00 0.00 0.00 4.79
317 318 0.821517 ATGTGGTATGCTTCGTCCGA 59.178 50.000 0.00 0.00 0.00 4.55
318 319 1.651987 AATGTGGTATGCTTCGTCCG 58.348 50.000 0.00 0.00 0.00 4.79
319 320 4.434713 AAAAATGTGGTATGCTTCGTCC 57.565 40.909 0.00 0.00 0.00 4.79
320 321 7.027161 ACAATAAAAATGTGGTATGCTTCGTC 58.973 34.615 0.00 0.00 0.00 4.20
321 322 6.919721 ACAATAAAAATGTGGTATGCTTCGT 58.080 32.000 0.00 0.00 0.00 3.85
322 323 8.957028 CATACAATAAAAATGTGGTATGCTTCG 58.043 33.333 0.00 0.00 33.92 3.79
323 324 9.248291 CCATACAATAAAAATGTGGTATGCTTC 57.752 33.333 0.00 0.00 37.70 3.86
324 325 8.757877 ACCATACAATAAAAATGTGGTATGCTT 58.242 29.630 0.00 0.00 37.70 3.91
325 326 8.196771 CACCATACAATAAAAATGTGGTATGCT 58.803 33.333 0.00 0.00 37.70 3.79
326 327 7.978975 ACACCATACAATAAAAATGTGGTATGC 59.021 33.333 0.00 0.00 37.70 3.14
327 328 9.515020 GACACCATACAATAAAAATGTGGTATG 57.485 33.333 0.00 0.00 38.37 2.39
328 329 8.402472 CGACACCATACAATAAAAATGTGGTAT 58.598 33.333 0.00 0.00 29.00 2.73
329 330 7.148222 CCGACACCATACAATAAAAATGTGGTA 60.148 37.037 0.00 0.00 29.00 3.25
330 331 6.349777 CCGACACCATACAATAAAAATGTGGT 60.350 38.462 0.00 0.00 29.78 4.16
331 332 6.033341 CCGACACCATACAATAAAAATGTGG 58.967 40.000 0.00 0.00 32.27 4.17
332 333 6.616947 ACCGACACCATACAATAAAAATGTG 58.383 36.000 0.00 0.00 32.27 3.21
333 334 6.827586 ACCGACACCATACAATAAAAATGT 57.172 33.333 0.00 0.00 34.81 2.71
334 335 8.455682 AGTTACCGACACCATACAATAAAAATG 58.544 33.333 0.00 0.00 0.00 2.32
335 336 8.570068 AGTTACCGACACCATACAATAAAAAT 57.430 30.769 0.00 0.00 0.00 1.82
336 337 7.660617 TGAGTTACCGACACCATACAATAAAAA 59.339 33.333 0.00 0.00 0.00 1.94
337 338 7.160049 TGAGTTACCGACACCATACAATAAAA 58.840 34.615 0.00 0.00 0.00 1.52
338 339 6.699366 TGAGTTACCGACACCATACAATAAA 58.301 36.000 0.00 0.00 0.00 1.40
339 340 6.283544 TGAGTTACCGACACCATACAATAA 57.716 37.500 0.00 0.00 0.00 1.40
340 341 5.918426 TGAGTTACCGACACCATACAATA 57.082 39.130 0.00 0.00 0.00 1.90
341 342 4.811969 TGAGTTACCGACACCATACAAT 57.188 40.909 0.00 0.00 0.00 2.71
342 343 4.603989 TTGAGTTACCGACACCATACAA 57.396 40.909 0.00 0.00 0.00 2.41
343 344 4.603989 TTTGAGTTACCGACACCATACA 57.396 40.909 0.00 0.00 0.00 2.29
344 345 7.599630 TTATTTTGAGTTACCGACACCATAC 57.400 36.000 0.00 0.00 0.00 2.39
345 346 6.314400 GCTTATTTTGAGTTACCGACACCATA 59.686 38.462 0.00 0.00 0.00 2.74
346 347 5.123344 GCTTATTTTGAGTTACCGACACCAT 59.877 40.000 0.00 0.00 0.00 3.55
347 348 4.453136 GCTTATTTTGAGTTACCGACACCA 59.547 41.667 0.00 0.00 0.00 4.17
348 349 4.453136 TGCTTATTTTGAGTTACCGACACC 59.547 41.667 0.00 0.00 0.00 4.16
349 350 5.600908 TGCTTATTTTGAGTTACCGACAC 57.399 39.130 0.00 0.00 0.00 3.67
350 351 5.935206 TGATGCTTATTTTGAGTTACCGACA 59.065 36.000 0.00 0.00 0.00 4.35
351 352 6.248631 GTGATGCTTATTTTGAGTTACCGAC 58.751 40.000 0.00 0.00 0.00 4.79
352 353 5.062934 CGTGATGCTTATTTTGAGTTACCGA 59.937 40.000 0.00 0.00 0.00 4.69
353 354 5.163893 ACGTGATGCTTATTTTGAGTTACCG 60.164 40.000 0.00 0.00 0.00 4.02
354 355 6.021596 CACGTGATGCTTATTTTGAGTTACC 58.978 40.000 10.90 0.00 0.00 2.85
355 356 6.599437 ACACGTGATGCTTATTTTGAGTTAC 58.401 36.000 25.01 0.00 0.00 2.50
356 357 6.795098 ACACGTGATGCTTATTTTGAGTTA 57.205 33.333 25.01 0.00 0.00 2.24
357 358 5.689383 ACACGTGATGCTTATTTTGAGTT 57.311 34.783 25.01 0.00 0.00 3.01
358 359 5.163992 CGTACACGTGATGCTTATTTTGAGT 60.164 40.000 25.01 0.00 34.11 3.41
359 360 5.061684 TCGTACACGTGATGCTTATTTTGAG 59.938 40.000 25.01 0.00 40.80 3.02
360 361 4.924462 TCGTACACGTGATGCTTATTTTGA 59.076 37.500 25.01 0.92 40.80 2.69
361 362 5.198116 TCGTACACGTGATGCTTATTTTG 57.802 39.130 25.01 0.00 40.80 2.44
362 363 7.709269 ATATCGTACACGTGATGCTTATTTT 57.291 32.000 25.01 0.00 40.80 1.82
363 364 7.709269 AATATCGTACACGTGATGCTTATTT 57.291 32.000 25.01 3.95 40.80 1.40
364 365 7.709269 AAATATCGTACACGTGATGCTTATT 57.291 32.000 25.01 15.35 40.80 1.40
365 366 7.709269 AAAATATCGTACACGTGATGCTTAT 57.291 32.000 25.01 10.43 40.80 1.73
366 367 7.528481 AAAAATATCGTACACGTGATGCTTA 57.472 32.000 25.01 8.52 40.80 3.09
367 368 6.417191 AAAAATATCGTACACGTGATGCTT 57.583 33.333 25.01 0.85 40.80 3.91
368 369 6.755141 ACTAAAAATATCGTACACGTGATGCT 59.245 34.615 25.01 1.30 40.80 3.79
369 370 6.929896 ACTAAAAATATCGTACACGTGATGC 58.070 36.000 25.01 10.42 40.80 3.91
370 371 8.110970 TGACTAAAAATATCGTACACGTGATG 57.889 34.615 25.01 11.24 40.80 3.07
371 372 8.692110 TTGACTAAAAATATCGTACACGTGAT 57.308 30.769 25.01 7.69 40.80 3.06
372 373 8.692110 ATTGACTAAAAATATCGTACACGTGA 57.308 30.769 25.01 2.68 40.80 4.35
373 374 9.194716 CAATTGACTAAAAATATCGTACACGTG 57.805 33.333 15.48 15.48 40.80 4.49
374 375 8.928733 ACAATTGACTAAAAATATCGTACACGT 58.071 29.630 13.59 0.00 40.80 4.49
375 376 9.194716 CACAATTGACTAAAAATATCGTACACG 57.805 33.333 13.59 0.00 41.45 4.49
379 380 9.982291 GCTTCACAATTGACTAAAAATATCGTA 57.018 29.630 13.59 0.00 0.00 3.43
380 381 8.511321 TGCTTCACAATTGACTAAAAATATCGT 58.489 29.630 13.59 0.00 0.00 3.73
381 382 8.788813 GTGCTTCACAATTGACTAAAAATATCG 58.211 33.333 13.59 0.00 34.08 2.92
382 383 9.624697 TGTGCTTCACAATTGACTAAAAATATC 57.375 29.630 13.59 0.00 41.69 1.63
383 384 9.630098 CTGTGCTTCACAATTGACTAAAAATAT 57.370 29.630 13.59 0.00 44.08 1.28
384 385 8.845227 TCTGTGCTTCACAATTGACTAAAAATA 58.155 29.630 13.59 0.00 44.08 1.40
385 386 7.715657 TCTGTGCTTCACAATTGACTAAAAAT 58.284 30.769 13.59 0.00 44.08 1.82
386 387 7.094508 TCTGTGCTTCACAATTGACTAAAAA 57.905 32.000 13.59 0.00 44.08 1.94
387 388 6.691754 TCTGTGCTTCACAATTGACTAAAA 57.308 33.333 13.59 0.00 44.08 1.52
388 389 5.277974 GCTCTGTGCTTCACAATTGACTAAA 60.278 40.000 13.59 0.00 44.08 1.85
389 390 4.214119 GCTCTGTGCTTCACAATTGACTAA 59.786 41.667 13.59 2.31 44.08 2.24
390 391 3.748048 GCTCTGTGCTTCACAATTGACTA 59.252 43.478 13.59 0.00 44.08 2.59
391 392 2.551459 GCTCTGTGCTTCACAATTGACT 59.449 45.455 13.59 0.00 44.08 3.41
392 393 2.291465 TGCTCTGTGCTTCACAATTGAC 59.709 45.455 13.59 0.00 44.08 3.18
393 394 2.574450 TGCTCTGTGCTTCACAATTGA 58.426 42.857 13.59 0.00 44.08 2.57
394 395 3.242518 CATGCTCTGTGCTTCACAATTG 58.757 45.455 3.24 3.24 44.08 2.32
395 396 2.230508 CCATGCTCTGTGCTTCACAATT 59.769 45.455 3.20 0.00 44.08 2.32
396 397 1.816835 CCATGCTCTGTGCTTCACAAT 59.183 47.619 3.20 0.00 44.08 2.71
397 398 1.241165 CCATGCTCTGTGCTTCACAA 58.759 50.000 3.20 0.00 44.08 3.33
398 399 0.607217 CCCATGCTCTGTGCTTCACA 60.607 55.000 3.20 0.00 42.45 3.58
399 400 0.607489 ACCCATGCTCTGTGCTTCAC 60.607 55.000 3.20 0.00 43.37 3.18
400 401 0.983467 TACCCATGCTCTGTGCTTCA 59.017 50.000 3.20 0.00 43.37 3.02
401 402 1.945394 CATACCCATGCTCTGTGCTTC 59.055 52.381 3.20 0.00 43.37 3.86
402 403 1.283029 ACATACCCATGCTCTGTGCTT 59.717 47.619 3.20 0.00 43.37 3.91
403 404 0.914644 ACATACCCATGCTCTGTGCT 59.085 50.000 3.20 0.00 43.37 4.40
404 405 1.019673 CACATACCCATGCTCTGTGC 58.980 55.000 0.00 0.00 43.25 4.57
405 406 1.065199 ACCACATACCCATGCTCTGTG 60.065 52.381 8.23 8.23 37.53 3.66
406 407 1.289160 ACCACATACCCATGCTCTGT 58.711 50.000 0.00 0.00 35.39 3.41
407 408 2.425143 AACCACATACCCATGCTCTG 57.575 50.000 0.00 0.00 35.39 3.35
408 409 3.456380 AAAACCACATACCCATGCTCT 57.544 42.857 0.00 0.00 35.39 4.09
429 430 1.474478 TGCGTTGCAACAGGAGAAAAA 59.526 42.857 28.01 0.84 34.76 1.94
430 431 1.098869 TGCGTTGCAACAGGAGAAAA 58.901 45.000 28.01 2.35 34.76 2.29
431 432 0.380378 GTGCGTTGCAACAGGAGAAA 59.620 50.000 28.01 3.37 41.47 2.52
432 433 1.771073 CGTGCGTTGCAACAGGAGAA 61.771 55.000 28.01 4.55 41.47 2.87
433 434 2.243957 CGTGCGTTGCAACAGGAGA 61.244 57.895 28.01 4.78 41.47 3.71
434 435 2.249309 CGTGCGTTGCAACAGGAG 59.751 61.111 28.01 13.45 41.47 3.69
435 436 3.276091 CCGTGCGTTGCAACAGGA 61.276 61.111 28.01 18.68 41.47 3.86
436 437 4.326766 CCCGTGCGTTGCAACAGG 62.327 66.667 28.01 22.31 41.47 4.00
437 438 4.980903 GCCCGTGCGTTGCAACAG 62.981 66.667 28.01 20.60 41.47 3.16
439 440 2.465097 TATTGCCCGTGCGTTGCAAC 62.465 55.000 19.89 19.89 46.60 4.17
441 442 2.261586 TTATTGCCCGTGCGTTGCA 61.262 52.632 2.68 2.68 41.78 4.08
442 443 1.799916 GTTATTGCCCGTGCGTTGC 60.800 57.895 0.00 0.00 41.78 4.17
443 444 0.179200 GAGTTATTGCCCGTGCGTTG 60.179 55.000 0.00 0.00 41.78 4.10
444 445 0.604243 TGAGTTATTGCCCGTGCGTT 60.604 50.000 0.00 0.00 41.78 4.84
445 446 0.392461 ATGAGTTATTGCCCGTGCGT 60.392 50.000 0.00 0.00 41.78 5.24
446 447 0.732571 AATGAGTTATTGCCCGTGCG 59.267 50.000 0.00 0.00 41.78 5.34
447 448 2.193306 CAATGAGTTATTGCCCGTGC 57.807 50.000 0.00 0.00 39.71 5.34
1644 6068 3.063997 CGACATGGTACCAGAAATCTTGC 59.936 47.826 21.41 7.15 0.00 4.01
1764 6188 1.159285 CCAAGAGAGCGCATGTTTCA 58.841 50.000 11.47 0.00 0.00 2.69
1863 6301 9.944663 TTCTGTCAAACACAAAAATATACAGAC 57.055 29.630 0.00 0.00 40.18 3.51
1934 6372 5.179929 GCTTGGGTGGAAAATCTGAAATTTG 59.820 40.000 0.00 0.00 0.00 2.32
1993 6431 5.188751 TCTCTCTCCCTGAAGAATTTCCTTC 59.811 44.000 0.00 0.00 42.09 3.46
2058 6496 8.561738 TTTCTATCCTAGCTAAAGGTTTTGTG 57.438 34.615 2.42 0.00 37.91 3.33
2125 6563 6.510157 CGATGGTTGAACACATTACATAGCTC 60.510 42.308 0.00 0.00 0.00 4.09
2166 6612 3.453717 AGATCCTAAGTCAGCATGCTTCA 59.546 43.478 19.98 4.46 34.96 3.02
2182 6629 5.300792 GGTGAGATCTTCGAAACTAGATCCT 59.699 44.000 17.33 8.20 45.05 3.24
2219 6666 1.616865 TCAACGATCCTCTTTCACCGT 59.383 47.619 0.00 0.00 0.00 4.83
2283 6743 7.326454 TGACATCACCAAGAGATTCTAAGAAG 58.674 38.462 0.00 0.00 0.00 2.85
2286 6746 7.011202 CACATGACATCACCAAGAGATTCTAAG 59.989 40.741 0.00 0.00 0.00 2.18
2287 6747 6.820152 CACATGACATCACCAAGAGATTCTAA 59.180 38.462 0.00 0.00 0.00 2.10
2317 6784 8.900781 CAAGATTTCATAGATGGACAAATGACT 58.099 33.333 0.00 0.00 0.00 3.41
2319 6786 8.054572 TCCAAGATTTCATAGATGGACAAATGA 58.945 33.333 0.00 0.00 32.28 2.57
2322 6789 7.503566 GGATCCAAGATTTCATAGATGGACAAA 59.496 37.037 6.95 0.00 39.57 2.83
2374 7286 5.297029 CGGATCAGAATTTACCTTTTCCTCC 59.703 44.000 0.00 0.00 0.00 4.30
2448 7360 1.079127 CCCCGACACCACTGCTAAG 60.079 63.158 0.00 0.00 0.00 2.18
2451 7363 2.203728 TACCCCGACACCACTGCT 60.204 61.111 0.00 0.00 0.00 4.24
2459 7371 2.874664 GCACACCACTACCCCGACA 61.875 63.158 0.00 0.00 0.00 4.35
2460 7372 2.047560 GCACACCACTACCCCGAC 60.048 66.667 0.00 0.00 0.00 4.79
2464 7376 4.404098 CCCGGCACACCACTACCC 62.404 72.222 0.00 0.00 34.57 3.69
2475 7387 2.920912 ACCGTCTTCTTCCCGGCA 60.921 61.111 0.00 0.00 45.49 5.69
2476 7388 2.434359 CACCGTCTTCTTCCCGGC 60.434 66.667 0.00 0.00 45.49 6.13
2511 7423 2.506881 GCGGGCTTGGCAAATTCG 60.507 61.111 0.00 6.40 0.00 3.34
2514 7426 2.283101 TCTGCGGGCTTGGCAAAT 60.283 55.556 0.00 0.00 40.39 2.32
2541 7605 1.070786 ACCAACGTGTGCCTTCGAT 59.929 52.632 0.00 0.00 0.00 3.59
2552 7616 2.819552 GCGCTGACAACACCAACGT 61.820 57.895 0.00 0.00 0.00 3.99
2569 7633 3.264897 CGTCTACGCATGCCCAGC 61.265 66.667 13.15 5.08 0.00 4.85
2599 8349 0.666274 TGGAGTGACGCATCGTGAAC 60.666 55.000 0.00 0.00 41.37 3.18
2657 8610 2.736995 GCTAGCAACACCGACGCA 60.737 61.111 10.63 0.00 0.00 5.24
2696 8649 2.223112 GCGCATCATCAACATCGACTTT 60.223 45.455 0.30 0.00 0.00 2.66
2730 8683 1.551019 GCCGGGTTCTTAGGACTGGT 61.551 60.000 2.18 0.00 0.00 4.00
2778 8803 1.692519 GGTTCCCGTCTACATATGCCT 59.307 52.381 1.58 0.00 0.00 4.75
2825 9013 1.066071 GTTGAGTCCTCTGCTAACCCC 60.066 57.143 0.00 0.00 0.00 4.95
2843 9031 3.036084 CTCGCGGCAACAGTCGTT 61.036 61.111 6.13 0.00 35.01 3.85
2845 9033 3.175240 CTCTCGCGGCAACAGTCG 61.175 66.667 6.13 0.00 0.00 4.18
2870 9103 2.267961 GGCACCTTCTACCCCACG 59.732 66.667 0.00 0.00 0.00 4.94
2898 9131 4.031426 CACTTAATCTACTTCGACAACCGC 59.969 45.833 0.00 0.00 38.37 5.68
2900 9133 6.196724 CGATCACTTAATCTACTTCGACAACC 59.803 42.308 0.00 0.00 0.00 3.77
2904 9137 5.213675 CCCGATCACTTAATCTACTTCGAC 58.786 45.833 0.00 0.00 0.00 4.20
2924 9157 1.823828 CGTCTTCGTCATCTAACCCG 58.176 55.000 0.00 0.00 0.00 5.28
2955 9188 4.332637 GCCGTTGTGCAGCACCAG 62.333 66.667 23.06 13.22 32.73 4.00
2964 9197 4.025401 GCCACCTTCGCCGTTGTG 62.025 66.667 0.00 0.00 0.00 3.33
2993 9226 2.202544 CTCGCTCACCTGAGTCGC 60.203 66.667 11.78 0.00 43.85 5.19
3024 9257 0.673022 CGCTGCTGCTCTTCTTCCTT 60.673 55.000 14.03 0.00 36.97 3.36
3037 9270 1.381327 TCCTAACCTAGGCGCTGCT 60.381 57.895 9.30 0.00 45.82 4.24
3044 9305 4.722279 AGGAAAATGGAGTCCTAACCTAGG 59.278 45.833 11.33 7.41 42.68 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.