AutoCloner

Multiple sequence alignment - TraesCS2B01G607900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G607900	chr2B	100.000	2549	0	0	1	2549	788228288	788230836	0.000000e+00	4708
1	TraesCS2B01G607900	chr2B	98.994	1988	17	2	562	2549	776222953	776224937	0.000000e+00	3557
2	TraesCS2B01G607900	chr2B	80.364	550	93	12	1	536	788519287	788519835	1.100000e-108	403
3	TraesCS2B01G607900	chr2B	82.303	356	50	8	1	346	788296615	788296967	1.920000e-76	296
4	TraesCS2B01G607900	chr2B	82.336	351	49	10	6	346	788419708	788419361	2.480000e-75	292
5	TraesCS2B01G607900	chr2B	82.022	356	51	8	1	346	788279009	788279361	8.920000e-75	291
6	TraesCS2B01G607900	chr5B	99.091	1980	16	1	570	2549	641128780	641126803	0.000000e+00	3555
7	TraesCS2B01G607900	chr3B	99.041	1982	15	2	568	2549	702857657	702855680	0.000000e+00	3552
8	TraesCS2B01G607900	chr3A	98.798	1996	21	2	555	2549	9952642	9954635	0.000000e+00	3550
9	TraesCS2B01G607900	chr3A	98.939	1980	17	2	570	2549	54951917	54953892	0.000000e+00	3537
10	TraesCS2B01G607900	chr6A	98.943	1986	17	3	565	2549	507719439	507721421	0.000000e+00	3548
11	TraesCS2B01G607900	chr7A	98.939	1980	18	2	570	2549	39015367	39017343	0.000000e+00	3537
12	TraesCS2B01G607900	chr7B	98.793	1989	17	4	561	2549	202776907	202778888	0.000000e+00	3533
13	TraesCS2B01G607900	chr4B	98.889	1981	19	2	569	2549	368430369	368428392	0.000000e+00	3533
14	TraesCS2B01G607900	chr2D	80.074	542	90	16	1	526	647515598	647515059	1.110000e-103	387
15	TraesCS2B01G607900	chr2A	80.074	542	90	16	1	526	772961655	772962194	1.110000e-103	387
16	TraesCS2B01G607900	chrUn	82.303	356	50	10	1	346	275724218	275723866	1.920000e-76	296
17	TraesCS2B01G607900	chr1A	84.615	234	30	4	82	310	537831695	537831463	7.090000e-56	228
18	TraesCS2B01G607900	chr1D	81.818	253	38	7	64	310	440039362	440039612	3.320000e-49	206

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G607900	chr2B	788228288	788230836	2548	False	4708	4708	100.000	1	2549	1	chr2B.!!$F2	2548
1	TraesCS2B01G607900	chr2B	776222953	776224937	1984	False	3557	3557	98.994	562	2549	1	chr2B.!!$F1	1987
2	TraesCS2B01G607900	chr2B	788519287	788519835	548	False	403	403	80.364	1	536	1	chr2B.!!$F5	535
3	TraesCS2B01G607900	chr5B	641126803	641128780	1977	True	3555	3555	99.091	570	2549	1	chr5B.!!$R1	1979
4	TraesCS2B01G607900	chr3B	702855680	702857657	1977	True	3552	3552	99.041	568	2549	1	chr3B.!!$R1	1981
5	TraesCS2B01G607900	chr3A	9952642	9954635	1993	False	3550	3550	98.798	555	2549	1	chr3A.!!$F1	1994
6	TraesCS2B01G607900	chr3A	54951917	54953892	1975	False	3537	3537	98.939	570	2549	1	chr3A.!!$F2	1979
7	TraesCS2B01G607900	chr6A	507719439	507721421	1982	False	3548	3548	98.943	565	2549	1	chr6A.!!$F1	1984
8	TraesCS2B01G607900	chr7A	39015367	39017343	1976	False	3537	3537	98.939	570	2549	1	chr7A.!!$F1	1979
9	TraesCS2B01G607900	chr7B	202776907	202778888	1981	False	3533	3533	98.793	561	2549	1	chr7B.!!$F1	1988
10	TraesCS2B01G607900	chr4B	368428392	368430369	1977	True	3533	3533	98.889	569	2549	1	chr4B.!!$R1	1980
11	TraesCS2B01G607900	chr2D	647515059	647515598	539	True	387	387	80.074	1	526	1	chr2D.!!$R1	525
12	TraesCS2B01G607900	chr2A	772961655	772962194	539	False	387	387	80.074	1	526	1	chr2A.!!$F1	525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
461	477	0.258484	TGTTGGGAGGTGGCCATATG	59.742	55.0	9.72	0.0	0.0	1.78	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1808	1824	2.378038	GGCCTAATTGGATGCAGTTGA	58.622	47.619	5.19	0.0	38.35	3.18	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	3.837570	AACCGACCGAACCCAAGCC	62.838	63.158	0.00	0.00	0.00	4.35
26	27	4.675029	CGACCGAACCCAAGCCGT	62.675	66.667	0.00	0.00	0.00	5.68
33	34	3.819877	AACCCAAGCCGTGACCGAC	62.820	63.158	0.00	0.00	35.63	4.79
48	56	2.976356	GACACACCTACCCGACCC	59.024	66.667	0.00	0.00	0.00	4.46
50	58	1.459921	ACACACCTACCCGACCCAA	60.460	57.895	0.00	0.00	0.00	4.12
54	62	3.405318	CCTACCCGACCCAACCCC	61.405	72.222	0.00	0.00	0.00	4.95
55	63	2.608368	CTACCCGACCCAACCCCA	60.608	66.667	0.00	0.00	0.00	4.96
76	84	3.569210	CCACCACCAGCCACTCCA	61.569	66.667	0.00	0.00	0.00	3.86
80	88	3.569210	CACCAGCCACTCCACCCA	61.569	66.667	0.00	0.00	0.00	4.51
82	90	3.569210	CCAGCCACTCCACCCACA	61.569	66.667	0.00	0.00	0.00	4.17
103	114	4.248842	CCACCACAGGCGACCACA	62.249	66.667	0.00	0.00	0.00	4.17
165	178	4.554036	GAGATGGTGGGCGCCTCC	62.554	72.222	28.56	27.11	37.65	4.30
175	188	4.415332	GCGCCTCCTCGTCGTTGA	62.415	66.667	0.00	0.00	0.00	3.18
179	192	1.141881	CCTCCTCGTCGTTGATGGG	59.858	63.158	0.00	0.00	0.00	4.00
180	193	1.519455	CTCCTCGTCGTTGATGGGC	60.519	63.158	0.00	0.00	0.00	5.36
183	196	0.744414	CCTCGTCGTTGATGGGCAAT	60.744	55.000	0.00	0.00	39.03	3.56
187	200	1.164411	GTCGTTGATGGGCAATGTGA	58.836	50.000	0.00	0.00	42.77	3.58
192	205	0.614415	TGATGGGCAATGTGAACCCC	60.614	55.000	0.00	0.00	43.54	4.95
207	220	2.589157	CCCCCTCGCCAACTACACA	61.589	63.158	0.00	0.00	0.00	3.72
209	222	0.462047	CCCCTCGCCAACTACACATC	60.462	60.000	0.00	0.00	0.00	3.06
213	226	1.079405	CGCCAACTACACATCCGGT	60.079	57.895	0.00	0.00	0.00	5.28
315	328	2.770048	CCTCGCCTCCCCAATCCT	60.770	66.667	0.00	0.00	0.00	3.24
327	340	4.689062	TCCCCAATCCTCTCCATATACTC	58.311	47.826	0.00	0.00	0.00	2.59
330	343	5.282298	CCCCAATCCTCTCCATATACTCCTA	60.282	48.000	0.00	0.00	0.00	2.94
335	348	4.475381	TCCTCTCCATATACTCCTATCGCT	59.525	45.833	0.00	0.00	0.00	4.93
336	349	5.666265	TCCTCTCCATATACTCCTATCGCTA	59.334	44.000	0.00	0.00	0.00	4.26
342	355	5.825679	CCATATACTCCTATCGCTAGAAGCT	59.174	44.000	0.00	0.00	39.60	3.74
347	360	5.001232	ACTCCTATCGCTAGAAGCTCTAAG	58.999	45.833	0.00	0.00	39.60	2.18
374	388	2.827755	AGCCCATAAAATTTCCGGGTT	58.172	42.857	16.70	10.70	39.27	4.11
378	392	4.563786	GCCCATAAAATTTCCGGGTTGAAA	60.564	41.667	16.70	0.00	39.27	2.69
382	396	7.102993	CCATAAAATTTCCGGGTTGAAAATCT	58.897	34.615	0.00	0.00	37.74	2.40
383	397	7.064490	CCATAAAATTTCCGGGTTGAAAATCTG	59.936	37.037	0.00	0.00	37.74	2.90
384	398	5.545063	AAATTTCCGGGTTGAAAATCTGT	57.455	34.783	0.00	0.00	37.74	3.41
385	399	6.658188	AAATTTCCGGGTTGAAAATCTGTA	57.342	33.333	0.00	0.00	37.74	2.74
388	402	3.881220	TCCGGGTTGAAAATCTGTATCC	58.119	45.455	0.00	0.00	28.83	2.59
394	408	6.258068	CGGGTTGAAAATCTGTATCCTTAGTC	59.742	42.308	0.00	0.00	0.00	2.59
405	420	7.776107	TCTGTATCCTTAGTCTTGAGTTCATG	58.224	38.462	0.00	0.00	0.00	3.07
410	425	5.188555	TCCTTAGTCTTGAGTTCATGAGCAT	59.811	40.000	12.41	0.00	31.81	3.79
414	429	6.047511	AGTCTTGAGTTCATGAGCATAGTT	57.952	37.500	12.41	0.00	31.81	2.24
415	430	5.873712	AGTCTTGAGTTCATGAGCATAGTTG	59.126	40.000	12.41	0.00	31.81	3.16
426	441	2.114670	CATAGTTGCCTGTGCCGGG	61.115	63.158	2.18	0.00	36.33	5.73
434	450	2.192979	CTGTGCCGGGCATACCAT	59.807	61.111	26.68	0.00	41.91	3.55
435	451	1.449782	CTGTGCCGGGCATACCATA	59.550	57.895	26.68	6.90	41.91	2.74
437	453	1.051556	TGTGCCGGGCATACCATAGA	61.052	55.000	26.68	0.00	41.91	1.98
439	455	0.762842	TGCCGGGCATACCATAGAGT	60.763	55.000	19.77	0.00	40.22	3.24
440	456	0.320771	GCCGGGCATACCATAGAGTG	60.321	60.000	15.62	0.00	40.22	3.51
445	461	3.244215	CGGGCATACCATAGAGTGATGTT	60.244	47.826	0.00	0.00	40.22	2.71
446	462	4.067896	GGGCATACCATAGAGTGATGTTG	58.932	47.826	0.00	0.00	39.85	3.33
458	474	1.307647	GATGTTGGGAGGTGGCCAT	59.692	57.895	9.72	0.00	0.00	4.40
461	477	0.258484	TGTTGGGAGGTGGCCATATG	59.742	55.000	9.72	0.00	0.00	1.78
462	478	0.550914	GTTGGGAGGTGGCCATATGA	59.449	55.000	9.72	0.00	0.00	2.15
464	480	1.067295	TGGGAGGTGGCCATATGATC	58.933	55.000	9.72	2.71	0.00	2.92
466	482	0.687354	GGAGGTGGCCATATGATCGT	59.313	55.000	9.72	0.00	0.00	3.73
500	516	6.422400	GTCAAAATTTGAAATTAACTCCGCCA	59.578	34.615	10.27	0.00	42.15	5.69
511	527	4.001248	TCCGCCAGGATGCTTTTG	57.999	55.556	0.00	0.00	42.75	2.44
519	535	3.443681	GCCAGGATGCTTTTGTTTAGCTA	59.556	43.478	0.00	0.00	39.38	3.32
520	536	4.675408	GCCAGGATGCTTTTGTTTAGCTAC	60.675	45.833	0.00	0.00	39.38	3.58
526	542	5.933187	TGCTTTTGTTTAGCTACGATCAA	57.067	34.783	0.00	0.00	39.38	2.57
528	544	6.370593	TGCTTTTGTTTAGCTACGATCAAAG	58.629	36.000	0.00	0.47	39.38	2.77
536	552	8.306038	TGTTTAGCTACGATCAAAGTTAGGTAA	58.694	33.333	0.00	0.00	0.00	2.85
537	553	9.143631	GTTTAGCTACGATCAAAGTTAGGTAAA	57.856	33.333	0.00	7.45	36.09	2.01
538	554	9.709495	TTTAGCTACGATCAAAGTTAGGTAAAA	57.291	29.630	0.00	0.00	35.76	1.52
539	555	9.880157	TTAGCTACGATCAAAGTTAGGTAAAAT	57.120	29.630	0.00	0.00	0.00	1.82
540	556	8.788325	AGCTACGATCAAAGTTAGGTAAAATT	57.212	30.769	0.00	0.00	0.00	1.82
541	557	8.665685	AGCTACGATCAAAGTTAGGTAAAATTG	58.334	33.333	0.00	0.00	0.00	2.32
542	558	8.448615	GCTACGATCAAAGTTAGGTAAAATTGT	58.551	33.333	0.00	0.00	0.00	2.71
543	559	9.968743	CTACGATCAAAGTTAGGTAAAATTGTC	57.031	33.333	0.00	0.00	0.00	3.18
544	560	8.617290	ACGATCAAAGTTAGGTAAAATTGTCT	57.383	30.769	0.00	0.00	0.00	3.41
545	561	8.718734	ACGATCAAAGTTAGGTAAAATTGTCTC	58.281	33.333	0.00	0.00	0.00	3.36
546	562	8.717821	CGATCAAAGTTAGGTAAAATTGTCTCA	58.282	33.333	0.00	0.00	0.00	3.27
788	804	4.329545	ACGCGTGGCTTGTGGGAT	62.330	61.111	12.93	0.00	0.00	3.85
1514	1530	3.738830	TGTAGGTATGGTAATCGCACC	57.261	47.619	0.00	0.00	39.20	5.01
1539	1555	6.034470	CGGTTGTAATGTTGAAAATGTATGGC	59.966	38.462	0.00	0.00	0.00	4.40
1808	1824	1.486726	GTGCAGGCTAGACTAATGGGT	59.513	52.381	0.00	0.00	0.00	4.51

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
16	17	4.309950	GTCGGTCACGGCTTGGGT	62.310	66.667	0.00	0.00	42.51	4.51
26	27	2.270257	CGGGTAGGTGTGTCGGTCA	61.270	63.158	0.00	0.00	0.00	4.02
33	34	1.004200	GTTGGGTCGGGTAGGTGTG	60.004	63.158	0.00	0.00	0.00	3.82
36	37	2.608678	GGGTTGGGTCGGGTAGGT	60.609	66.667	0.00	0.00	0.00	3.08
39	40	2.929477	GTGGGGTTGGGTCGGGTA	60.929	66.667	0.00	0.00	0.00	3.69
48	56	4.614036	GTGGTGGGGGTGGGGTTG	62.614	72.222	0.00	0.00	0.00	3.77
103	114	1.599576	GCTTTCTTCTCGGGCTCCT	59.400	57.895	0.00	0.00	0.00	3.69
138	151	1.617018	CCACCATCTCCTCCGCTTCA	61.617	60.000	0.00	0.00	0.00	3.02
165	178	0.374758	CATTGCCCATCAACGACGAG	59.625	55.000	0.00	0.00	37.53	4.18
166	179	0.321210	ACATTGCCCATCAACGACGA	60.321	50.000	0.00	0.00	37.53	4.20
173	186	0.614415	GGGGTTCACATTGCCCATCA	60.614	55.000	0.00	0.00	44.07	3.07
175	188	1.306056	GGGGGTTCACATTGCCCAT	60.306	57.895	0.00	0.00	44.07	4.00
179	192	2.700773	GCGAGGGGGTTCACATTGC	61.701	63.158	0.00	0.00	0.00	3.56
180	193	2.046285	GGCGAGGGGGTTCACATTG	61.046	63.158	0.00	0.00	0.00	2.82
183	196	3.172106	TTGGCGAGGGGGTTCACA	61.172	61.111	0.00	0.00	0.00	3.58
187	200	1.844289	TGTAGTTGGCGAGGGGGTT	60.844	57.895	0.00	0.00	0.00	4.11
192	205	0.806102	CGGATGTGTAGTTGGCGAGG	60.806	60.000	0.00	0.00	0.00	4.63
207	220	4.115199	GGCTCCTTGGCACCGGAT	62.115	66.667	9.46	0.00	41.37	4.18
213	226	1.000521	CATCTTGGGCTCCTTGGCA	60.001	57.895	0.00	0.00	43.83	4.92
214	227	1.755783	CCATCTTGGGCTCCTTGGC	60.756	63.158	0.00	0.00	40.96	4.52
265	278	3.077359	GCACTTACTTGACCTTCATGCT	58.923	45.455	0.00	0.00	0.00	3.79
309	322	6.238897	GCGATAGGAGTATATGGAGAGGATTG	60.239	46.154	0.00	0.00	0.00	2.67
310	323	5.830991	GCGATAGGAGTATATGGAGAGGATT	59.169	44.000	0.00	0.00	0.00	3.01
315	328	6.809976	TCTAGCGATAGGAGTATATGGAGA	57.190	41.667	8.03	0.00	0.00	3.71
347	360	9.091343	ACCCGGAAATTTTATGGGCTTTATAGC	62.091	40.741	18.23	0.00	44.00	2.97
349	362	6.137559	ACCCGGAAATTTTATGGGCTTTATA	58.862	36.000	18.23	0.00	44.00	0.98
350	363	4.966168	ACCCGGAAATTTTATGGGCTTTAT	59.034	37.500	18.23	2.00	44.00	1.40
353	366	2.827755	ACCCGGAAATTTTATGGGCTT	58.172	42.857	18.23	3.12	44.00	4.35
357	370	7.064490	CAGATTTTCAACCCGGAAATTTTATGG	59.936	37.037	0.73	0.00	36.71	2.74
359	372	7.676004	ACAGATTTTCAACCCGGAAATTTTAT	58.324	30.769	0.73	0.00	36.71	1.40
360	373	7.056844	ACAGATTTTCAACCCGGAAATTTTA	57.943	32.000	0.73	0.00	36.71	1.52
362	375	5.545063	ACAGATTTTCAACCCGGAAATTT	57.455	34.783	0.73	0.00	36.71	1.82
363	376	6.127451	GGATACAGATTTTCAACCCGGAAATT	60.127	38.462	0.73	0.00	36.71	1.82
367	381	3.521937	AGGATACAGATTTTCAACCCGGA	59.478	43.478	0.73	0.00	41.41	5.14
374	388	8.816894	ACTCAAGACTAAGGATACAGATTTTCA	58.183	33.333	0.00	0.00	41.41	2.69
378	392	8.367660	TGAACTCAAGACTAAGGATACAGATT	57.632	34.615	0.00	0.00	41.41	2.40
382	396	7.631594	GCTCATGAACTCAAGACTAAGGATACA	60.632	40.741	0.00	0.00	41.41	2.29
383	397	6.699642	GCTCATGAACTCAAGACTAAGGATAC	59.300	42.308	0.00	0.00	0.00	2.24
384	398	6.381133	TGCTCATGAACTCAAGACTAAGGATA	59.619	38.462	0.00	0.00	0.00	2.59
385	399	5.188555	TGCTCATGAACTCAAGACTAAGGAT	59.811	40.000	0.00	0.00	0.00	3.24
388	402	7.264221	ACTATGCTCATGAACTCAAGACTAAG	58.736	38.462	0.00	0.00	0.00	2.18
420	435	0.762842	ACTCTATGGTATGCCCGGCA	60.763	55.000	16.17	16.17	44.86	5.69
423	438	2.300152	ACATCACTCTATGGTATGCCCG	59.700	50.000	0.00	0.00	35.15	6.13
426	441	4.067896	CCCAACATCACTCTATGGTATGC	58.932	47.826	0.00	0.00	0.00	3.14
427	442	5.512060	CCTCCCAACATCACTCTATGGTATG	60.512	48.000	0.00	0.00	0.00	2.39
430	446	2.774234	CCTCCCAACATCACTCTATGGT	59.226	50.000	0.00	0.00	0.00	3.55
434	450	2.187958	CCACCTCCCAACATCACTCTA	58.812	52.381	0.00	0.00	0.00	2.43
435	451	0.987294	CCACCTCCCAACATCACTCT	59.013	55.000	0.00	0.00	0.00	3.24
437	453	1.380302	GCCACCTCCCAACATCACT	59.620	57.895	0.00	0.00	0.00	3.41
439	455	1.508667	ATGGCCACCTCCCAACATCA	61.509	55.000	8.16	0.00	35.67	3.07
440	456	0.550914	TATGGCCACCTCCCAACATC	59.449	55.000	8.16	0.00	35.67	3.06
445	461	1.067295	GATCATATGGCCACCTCCCA	58.933	55.000	8.16	0.00	36.66	4.37
446	462	0.036010	CGATCATATGGCCACCTCCC	60.036	60.000	8.16	0.00	0.00	4.30
491	507	0.251341	AAAAGCATCCTGGCGGAGTT	60.251	50.000	0.00	0.00	44.06	3.01
500	516	4.575885	TCGTAGCTAAACAAAAGCATCCT	58.424	39.130	0.00	0.00	42.62	3.24
510	526	6.694447	ACCTAACTTTGATCGTAGCTAAACA	58.306	36.000	0.00	0.00	0.00	2.83
511	527	8.693542	TTACCTAACTTTGATCGTAGCTAAAC	57.306	34.615	0.00	0.00	0.00	2.01
519	535	8.617290	AGACAATTTTACCTAACTTTGATCGT	57.383	30.769	0.00	0.00	0.00	3.73
520	536	8.717821	TGAGACAATTTTACCTAACTTTGATCG	58.282	33.333	0.00	0.00	0.00	3.69
564	580	7.289084	GGGCAAAAGGATAATTAACCCTATCAA	59.711	37.037	8.09	0.00	31.84	2.57
894	910	2.407210	CGCCGTGCTCTCTCTCTC	59.593	66.667	0.00	0.00	0.00	3.20
895	911	3.137459	CCGCCGTGCTCTCTCTCT	61.137	66.667	0.00	0.00	0.00	3.10
1514	1530	6.034470	GCCATACATTTTCAACATTACAACCG	59.966	38.462	0.00	0.00	0.00	4.44
1539	1555	7.767198	ACAAATTCCTTCATAATTCATGCCTTG	59.233	33.333	0.00	0.00	34.35	3.61
1808	1824	2.378038	GGCCTAATTGGATGCAGTTGA	58.622	47.619	5.19	0.00	38.35	3.18
1898	1914	8.037758	TCAATTAGCTTCCACAAAAAGTTTCAA	58.962	29.630	0.00	0.00	0.00	2.69
2011	2027	6.426328	GGCACATTTTTCATGACATTTTGGTA	59.574	34.615	0.00	0.00	0.00	3.25
2160	2176	2.606826	GGGTTCGAGTCCCCAGGT	60.607	66.667	14.49	0.00	40.88	4.00

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.