Multiple sequence alignment - TraesCS2B01G607100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G607100 chr2B 100.000 5096 0 0 1 5096 787955634 787960729 0.000000e+00 9411.0
1 TraesCS2B01G607100 chr2B 86.109 1627 160 32 2162 3741 787979478 787977871 0.000000e+00 1692.0
2 TraesCS2B01G607100 chr2B 84.039 1015 114 27 916 1912 787980579 787979595 0.000000e+00 933.0
3 TraesCS2B01G607100 chr2B 90.417 240 10 5 4327 4554 787977290 787977052 2.310000e-78 303.0
4 TraesCS2B01G607100 chr2B 91.111 180 6 3 4630 4809 787977055 787976886 8.530000e-58 235.0
5 TraesCS2B01G607100 chr2B 92.547 161 7 2 4524 4681 787982753 787982595 5.130000e-55 226.0
6 TraesCS2B01G607100 chr2B 83.796 216 18 11 3752 3965 787977595 787977395 6.740000e-44 189.0
7 TraesCS2B01G607100 chr2B 91.089 101 7 1 4855 4955 787976881 787976783 8.900000e-28 135.0
8 TraesCS2B01G607100 chr2A 86.416 2849 246 71 2021 4796 772437505 772434725 0.000000e+00 2987.0
9 TraesCS2B01G607100 chr2A 86.255 1004 79 23 930 1917 772438464 772437504 0.000000e+00 1035.0
10 TraesCS2B01G607100 chr2A 80.635 630 66 26 4355 4953 772375254 772375858 2.180000e-118 436.0
11 TraesCS2B01G607100 chr2A 95.105 143 5 1 4956 5096 554078343 554078201 1.850000e-54 224.0
12 TraesCS2B01G607100 chr2A 87.742 155 6 2 4353 4494 779975417 779975263 8.770000e-38 169.0
13 TraesCS2B01G607100 chr2A 95.238 42 2 0 383 424 772438864 772438823 3.290000e-07 67.6
14 TraesCS2B01G607100 chr2D 91.429 1960 130 21 2021 3965 650779244 650777308 0.000000e+00 2654.0
15 TraesCS2B01G607100 chr2D 92.556 1706 97 21 2021 3701 647837755 647839455 0.000000e+00 2420.0
16 TraesCS2B01G607100 chr2D 87.045 1320 126 25 614 1912 650780542 650779247 0.000000e+00 1448.0
17 TraesCS2B01G607100 chr2D 91.078 1020 62 12 911 1917 647836753 647837756 0.000000e+00 1352.0
18 TraesCS2B01G607100 chr2D 81.865 579 75 18 4013 4586 650777310 650776757 1.290000e-125 460.0
19 TraesCS2B01G607100 chr2D 89.041 219 16 5 3696 3911 647839688 647839901 1.090000e-66 265.0
20 TraesCS2B01G607100 chr2D 96.479 142 4 1 4956 5096 431924676 431924535 3.070000e-57 233.0
21 TraesCS2B01G607100 chr2D 87.692 195 11 7 230 424 650781013 650780832 1.110000e-51 215.0
22 TraesCS2B01G607100 chr2D 94.059 101 5 1 4355 4455 650750896 650750995 8.840000e-33 152.0
23 TraesCS2B01G607100 chr2D 83.846 130 11 2 17 146 650824973 650824854 1.160000e-21 115.0
24 TraesCS2B01G607100 chr2D 95.161 62 3 0 5035 5096 433021246 433021307 1.170000e-16 99.0
25 TraesCS2B01G607100 chr7D 96.522 115 4 0 1916 2030 52468753 52468639 1.870000e-44 191.0
26 TraesCS2B01G607100 chr7D 95.726 117 3 2 1906 2022 568753481 568753367 2.420000e-43 187.0
27 TraesCS2B01G607100 chr3A 98.165 109 2 0 1915 2023 396620816 396620924 1.870000e-44 191.0
28 TraesCS2B01G607100 chr7B 97.297 111 3 0 1915 2025 27494394 27494504 6.740000e-44 189.0
29 TraesCS2B01G607100 chr6D 96.491 114 4 0 1912 2025 112344486 112344373 6.740000e-44 189.0
30 TraesCS2B01G607100 chr6D 94.167 120 7 0 1916 2035 132306978 132306859 3.130000e-42 183.0
31 TraesCS2B01G607100 chr1B 95.763 118 3 2 1906 2023 669891459 669891574 6.740000e-44 189.0
32 TraesCS2B01G607100 chr6B 94.915 118 6 0 1914 2031 37764452 37764569 8.710000e-43 185.0
33 TraesCS2B01G607100 chr3B 93.548 124 7 1 1900 2023 454671368 454671490 3.130000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G607100 chr2B 787955634 787960729 5095 False 9411.000000 9411 100.000000 1 5096 1 chr2B.!!$F1 5095
1 TraesCS2B01G607100 chr2B 787976783 787982753 5970 True 530.428571 1692 88.444000 916 4955 7 chr2B.!!$R1 4039
2 TraesCS2B01G607100 chr2A 772434725 772438864 4139 True 1363.200000 2987 89.303000 383 4796 3 chr2A.!!$R3 4413
3 TraesCS2B01G607100 chr2A 772375254 772375858 604 False 436.000000 436 80.635000 4355 4953 1 chr2A.!!$F1 598
4 TraesCS2B01G607100 chr2D 647836753 647839901 3148 False 1345.666667 2420 90.891667 911 3911 3 chr2D.!!$F3 3000
5 TraesCS2B01G607100 chr2D 650776757 650781013 4256 True 1194.250000 2654 87.007750 230 4586 4 chr2D.!!$R3 4356

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 172 0.106894 GAGTAGGATTTCGGCCCAGG 59.893 60.000 0.00 0.0 0.0 4.45 F
371 372 0.109039 GTGGCGTGGTTCTCTCTCTC 60.109 60.000 0.00 0.0 0.0 3.20 F
1929 3224 0.245539 TTTGCTACTCCCTCCGTTCG 59.754 55.000 0.00 0.0 0.0 3.95 F
1943 3238 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.0 0.0 5.19 F
2334 3641 1.298859 GCTGGTGTGTCGTTGGGATC 61.299 60.000 0.00 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2044 3339 0.320050 TACTGCGCATTGGTGAGTGA 59.680 50.000 12.24 0.0 0.00 3.41 R
2241 3548 0.871722 TCCTTTGCACGAATCCAACG 59.128 50.000 0.00 0.0 0.00 4.10 R
3866 5737 1.003580 TGGGGCATTTGAGACAGACTC 59.996 52.381 0.00 0.0 45.11 3.36 R
3867 5738 1.067295 TGGGGCATTTGAGACAGACT 58.933 50.000 0.00 0.0 0.00 3.24 R
4220 6094 0.179100 CATAGGGTCACAGTCTGCCG 60.179 60.000 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 5.715434 TTAAAATTTGGAGAACCCTTCCG 57.285 39.130 0.00 0.00 35.38 4.30
76 77 3.518992 AAATTTGGAGAACCCTTCCGA 57.481 42.857 0.00 0.00 35.38 4.55
77 78 3.518992 AATTTGGAGAACCCTTCCGAA 57.481 42.857 0.00 0.00 35.38 4.30
79 80 1.430992 TTGGAGAACCCTTCCGAAGT 58.569 50.000 7.37 0.00 35.38 3.01
81 82 1.071699 TGGAGAACCCTTCCGAAGTTG 59.928 52.381 7.37 1.00 35.38 3.16
82 83 1.346722 GGAGAACCCTTCCGAAGTTGA 59.653 52.381 7.37 0.00 0.00 3.18
83 84 2.613223 GGAGAACCCTTCCGAAGTTGAG 60.613 54.545 7.37 0.00 0.00 3.02
84 85 2.299297 GAGAACCCTTCCGAAGTTGAGA 59.701 50.000 7.37 0.00 0.00 3.27
87 88 1.766496 ACCCTTCCGAAGTTGAGACAA 59.234 47.619 7.37 0.00 0.00 3.18
88 89 2.171870 ACCCTTCCGAAGTTGAGACAAA 59.828 45.455 7.37 0.00 0.00 2.83
89 90 2.548480 CCCTTCCGAAGTTGAGACAAAC 59.452 50.000 7.37 0.00 0.00 2.93
90 91 3.202906 CCTTCCGAAGTTGAGACAAACA 58.797 45.455 7.37 0.00 32.21 2.83
91 92 3.815401 CCTTCCGAAGTTGAGACAAACAT 59.185 43.478 7.37 0.00 32.21 2.71
92 93 4.275936 CCTTCCGAAGTTGAGACAAACATT 59.724 41.667 7.37 0.00 32.21 2.71
93 94 5.418310 TTCCGAAGTTGAGACAAACATTC 57.582 39.130 0.00 0.00 32.21 2.67
94 95 4.703897 TCCGAAGTTGAGACAAACATTCT 58.296 39.130 0.00 0.00 32.21 2.40
96 97 5.588648 TCCGAAGTTGAGACAAACATTCTTT 59.411 36.000 0.00 0.00 32.21 2.52
97 98 5.682862 CCGAAGTTGAGACAAACATTCTTTG 59.317 40.000 0.00 0.00 35.64 2.77
98 99 5.682862 CGAAGTTGAGACAAACATTCTTTGG 59.317 40.000 0.00 0.00 33.92 3.28
99 100 6.458206 CGAAGTTGAGACAAACATTCTTTGGA 60.458 38.462 0.00 0.00 33.92 3.53
100 101 6.773976 AGTTGAGACAAACATTCTTTGGAA 57.226 33.333 0.00 0.00 33.92 3.53
143 144 4.642885 TGTGAACAAAAATCGAGAACCCTT 59.357 37.500 0.00 0.00 0.00 3.95
145 146 4.277423 TGAACAAAAATCGAGAACCCTTCC 59.723 41.667 0.00 0.00 0.00 3.46
148 149 3.629142 AAAATCGAGAACCCTTCCGAT 57.371 42.857 0.00 0.00 41.47 4.18
151 152 3.729862 ATCGAGAACCCTTCCGATAAC 57.270 47.619 0.00 0.00 39.52 1.89
152 153 1.402968 TCGAGAACCCTTCCGATAACG 59.597 52.381 0.00 0.00 39.43 3.18
154 155 2.541178 CGAGAACCCTTCCGATAACGAG 60.541 54.545 0.00 0.00 42.66 4.18
155 156 2.426381 GAGAACCCTTCCGATAACGAGT 59.574 50.000 0.00 0.00 42.66 4.18
157 158 3.631227 AGAACCCTTCCGATAACGAGTAG 59.369 47.826 0.00 0.00 42.66 2.57
158 159 2.305009 ACCCTTCCGATAACGAGTAGG 58.695 52.381 0.00 0.00 42.66 3.18
160 161 3.155501 CCCTTCCGATAACGAGTAGGAT 58.844 50.000 0.00 0.00 42.66 3.24
161 162 3.573110 CCCTTCCGATAACGAGTAGGATT 59.427 47.826 0.00 0.00 42.66 3.01
162 163 4.038883 CCCTTCCGATAACGAGTAGGATTT 59.961 45.833 0.00 0.00 42.66 2.17
163 164 5.221130 CCTTCCGATAACGAGTAGGATTTC 58.779 45.833 0.00 0.00 42.66 2.17
164 165 4.478843 TCCGATAACGAGTAGGATTTCG 57.521 45.455 0.00 0.00 42.66 3.46
165 166 3.251729 TCCGATAACGAGTAGGATTTCGG 59.748 47.826 0.00 0.00 44.64 4.30
166 167 2.978489 CGATAACGAGTAGGATTTCGGC 59.022 50.000 0.00 0.00 40.93 5.54
167 168 2.877043 TAACGAGTAGGATTTCGGCC 57.123 50.000 0.00 0.00 40.93 6.13
170 171 0.249489 CGAGTAGGATTTCGGCCCAG 60.249 60.000 0.00 0.00 33.39 4.45
171 172 0.106894 GAGTAGGATTTCGGCCCAGG 59.893 60.000 0.00 0.00 0.00 4.45
172 173 1.526225 GTAGGATTTCGGCCCAGGC 60.526 63.158 0.00 0.00 41.06 4.85
182 183 2.116125 GCCCAGGCCTGTGAGTTT 59.884 61.111 30.63 0.00 34.56 2.66
183 184 1.973812 GCCCAGGCCTGTGAGTTTC 60.974 63.158 30.63 2.87 34.56 2.78
184 185 1.455849 CCCAGGCCTGTGAGTTTCA 59.544 57.895 30.63 0.00 0.00 2.69
195 196 1.597663 GTGAGTTTCACGTGGTTCTGG 59.402 52.381 17.00 0.00 37.67 3.86
196 197 1.226746 GAGTTTCACGTGGTTCTGGG 58.773 55.000 17.00 0.00 0.00 4.45
197 198 0.818040 AGTTTCACGTGGTTCTGGGC 60.818 55.000 17.00 0.00 0.00 5.36
198 199 1.527380 TTTCACGTGGTTCTGGGCC 60.527 57.895 17.00 0.00 0.00 5.80
199 200 3.818121 TTCACGTGGTTCTGGGCCG 62.818 63.158 17.00 0.00 0.00 6.13
205 206 3.489513 GGTTCTGGGCCGGCCTAT 61.490 66.667 42.70 0.00 36.10 2.57
206 207 2.595655 GTTCTGGGCCGGCCTATT 59.404 61.111 42.70 0.00 36.10 1.73
207 208 1.526225 GTTCTGGGCCGGCCTATTC 60.526 63.158 42.70 27.49 36.10 1.75
209 210 0.399376 TTCTGGGCCGGCCTATTCTA 60.399 55.000 42.70 20.85 36.10 2.10
210 211 0.399376 TCTGGGCCGGCCTATTCTAA 60.399 55.000 42.70 19.57 36.10 2.10
211 212 0.472471 CTGGGCCGGCCTATTCTAAA 59.528 55.000 42.70 17.79 36.10 1.85
212 213 0.181824 TGGGCCGGCCTATTCTAAAC 59.818 55.000 42.70 24.08 36.10 2.01
213 214 0.472898 GGGCCGGCCTATTCTAAACT 59.527 55.000 42.70 0.00 36.10 2.66
214 215 1.594331 GGCCGGCCTATTCTAAACTG 58.406 55.000 38.76 0.00 0.00 3.16
215 216 1.134189 GGCCGGCCTATTCTAAACTGT 60.134 52.381 38.76 0.00 0.00 3.55
217 218 2.835027 CCGGCCTATTCTAAACTGTCC 58.165 52.381 0.00 0.00 0.00 4.02
218 219 2.484947 CCGGCCTATTCTAAACTGTCCC 60.485 54.545 0.00 0.00 0.00 4.46
221 222 3.071167 GGCCTATTCTAAACTGTCCCGAT 59.929 47.826 0.00 0.00 0.00 4.18
222 223 4.282703 GGCCTATTCTAAACTGTCCCGATA 59.717 45.833 0.00 0.00 0.00 2.92
224 225 5.927115 GCCTATTCTAAACTGTCCCGATAAG 59.073 44.000 0.00 0.00 0.00 1.73
226 227 7.146648 CCTATTCTAAACTGTCCCGATAAGAC 58.853 42.308 0.00 0.00 34.72 3.01
227 228 4.996788 TCTAAACTGTCCCGATAAGACC 57.003 45.455 0.00 0.00 33.09 3.85
228 229 2.667473 AAACTGTCCCGATAAGACCG 57.333 50.000 0.00 0.00 33.09 4.79
255 256 3.933332 CGTATTTCCTCCGAGCTTCTTTT 59.067 43.478 0.00 0.00 0.00 2.27
258 259 3.771577 TTCCTCCGAGCTTCTTTTTCT 57.228 42.857 0.00 0.00 0.00 2.52
268 269 2.297315 GCTTCTTTTTCTTCCACCCCTG 59.703 50.000 0.00 0.00 0.00 4.45
303 304 4.028490 TCGCCCCACCGCAAATCT 62.028 61.111 0.00 0.00 0.00 2.40
306 307 2.481471 GCCCCACCGCAAATCTAGC 61.481 63.158 0.00 0.00 0.00 3.42
357 358 2.685380 AGGAGGAGGGAAGTGGCG 60.685 66.667 0.00 0.00 0.00 5.69
358 359 3.003763 GGAGGAGGGAAGTGGCGT 61.004 66.667 0.00 0.00 0.00 5.68
360 361 3.316573 GAGGAGGGAAGTGGCGTGG 62.317 68.421 0.00 0.00 0.00 4.94
361 362 3.637273 GGAGGGAAGTGGCGTGGT 61.637 66.667 0.00 0.00 0.00 4.16
362 363 2.430367 GAGGGAAGTGGCGTGGTT 59.570 61.111 0.00 0.00 0.00 3.67
365 366 1.671379 GGGAAGTGGCGTGGTTCTC 60.671 63.158 0.00 0.00 0.00 2.87
366 367 1.371558 GGAAGTGGCGTGGTTCTCT 59.628 57.895 0.00 0.00 0.00 3.10
367 368 0.670854 GGAAGTGGCGTGGTTCTCTC 60.671 60.000 0.00 0.00 0.00 3.20
368 369 0.318762 GAAGTGGCGTGGTTCTCTCT 59.681 55.000 0.00 0.00 0.00 3.10
369 370 0.318762 AAGTGGCGTGGTTCTCTCTC 59.681 55.000 0.00 0.00 0.00 3.20
370 371 0.540830 AGTGGCGTGGTTCTCTCTCT 60.541 55.000 0.00 0.00 0.00 3.10
371 372 0.109039 GTGGCGTGGTTCTCTCTCTC 60.109 60.000 0.00 0.00 0.00 3.20
372 373 1.137825 GGCGTGGTTCTCTCTCTCG 59.862 63.158 0.00 0.00 0.00 4.04
373 374 1.515304 GCGTGGTTCTCTCTCTCGC 60.515 63.158 0.00 0.00 35.86 5.03
375 376 1.515304 GTGGTTCTCTCTCTCGCGC 60.515 63.158 0.00 0.00 0.00 6.86
436 528 3.560068 CAGGTAACATCAGCCGGATTTAC 59.440 47.826 5.05 4.29 41.41 2.01
451 543 6.310711 GCCGGATTTACTAGCATAACATCTAC 59.689 42.308 5.05 0.00 0.00 2.59
452 544 7.603651 CCGGATTTACTAGCATAACATCTACT 58.396 38.462 0.00 0.00 0.00 2.57
453 545 7.542477 CCGGATTTACTAGCATAACATCTACTG 59.458 40.741 0.00 0.00 0.00 2.74
454 546 8.082852 CGGATTTACTAGCATAACATCTACTGT 58.917 37.037 0.00 0.00 40.84 3.55
455 547 9.197694 GGATTTACTAGCATAACATCTACTGTG 57.802 37.037 0.00 0.00 38.39 3.66
458 550 9.582431 TTTACTAGCATAACATCTACTGTGTTC 57.418 33.333 0.00 0.00 40.13 3.18
465 557 8.119226 GCATAACATCTACTGTGTTCTGATTTC 58.881 37.037 8.09 0.00 40.13 2.17
490 586 9.665719 TCAATCTGTAACATCAAACTATTAGCA 57.334 29.630 0.00 0.00 0.00 3.49
513 612 7.714377 AGCATCTACTTATATATTGCTCCATGC 59.286 37.037 0.89 4.75 43.25 4.06
593 725 7.691993 ACAGACCTAAATATACCACTCCATT 57.308 36.000 0.00 0.00 0.00 3.16
596 728 7.657761 CAGACCTAAATATACCACTCCATTGAC 59.342 40.741 0.00 0.00 0.00 3.18
598 730 7.736893 ACCTAAATATACCACTCCATTGACTC 58.263 38.462 0.00 0.00 0.00 3.36
600 732 6.575244 AAATATACCACTCCATTGACTCCA 57.425 37.500 0.00 0.00 0.00 3.86
601 733 6.770286 AATATACCACTCCATTGACTCCAT 57.230 37.500 0.00 0.00 0.00 3.41
603 735 3.077484 ACCACTCCATTGACTCCATTG 57.923 47.619 0.00 0.00 0.00 2.82
605 737 3.012518 CCACTCCATTGACTCCATTGAC 58.987 50.000 0.00 0.00 0.00 3.18
607 739 3.937706 CACTCCATTGACTCCATTGACTC 59.062 47.826 0.00 0.00 0.00 3.36
608 740 3.054802 ACTCCATTGACTCCATTGACTCC 60.055 47.826 0.00 0.00 0.00 3.85
611 743 4.018141 TCCATTGACTCCATTGACTCCATT 60.018 41.667 0.00 0.00 0.00 3.16
612 744 4.097437 CCATTGACTCCATTGACTCCATTG 59.903 45.833 0.00 0.00 0.00 2.82
672 833 5.296780 ACTCATTGTGTTACTCTGTTTGGTG 59.703 40.000 0.00 0.00 0.00 4.17
673 834 4.578516 TCATTGTGTTACTCTGTTTGGTGG 59.421 41.667 0.00 0.00 0.00 4.61
675 836 4.757019 TGTGTTACTCTGTTTGGTGGTA 57.243 40.909 0.00 0.00 0.00 3.25
687 848 9.787532 CTCTGTTTGGTGGTAATTATGTAATTG 57.212 33.333 7.98 0.00 36.62 2.32
709 870 3.629142 ATACAGTAAGAAGGTGCCACC 57.371 47.619 5.50 5.50 38.99 4.61
714 875 2.835764 AGTAAGAAGGTGCCACCGAATA 59.164 45.455 8.52 0.00 44.90 1.75
725 886 5.329493 GTGCCACCGAATAAAATAGTTCAC 58.671 41.667 0.00 0.00 0.00 3.18
730 891 7.544217 GCCACCGAATAAAATAGTTCACAAAAT 59.456 33.333 0.00 0.00 0.00 1.82
731 892 9.072294 CCACCGAATAAAATAGTTCACAAAATC 57.928 33.333 0.00 0.00 0.00 2.17
733 894 9.840427 ACCGAATAAAATAGTTCACAAAATCAG 57.160 29.630 0.00 0.00 0.00 2.90
781 943 7.981789 TGAGTGGCAAGAATAGTTAGAATGTAG 59.018 37.037 0.00 0.00 0.00 2.74
834 996 6.275335 TCTCTTTTGAGCAGAAATTTGTTGG 58.725 36.000 0.00 0.00 45.83 3.77
835 997 5.358922 TCTTTTGAGCAGAAATTTGTTGGG 58.641 37.500 0.00 0.00 0.00 4.12
858 1020 6.128090 GGGAAGTTAATCGGAACCTTGTTTAG 60.128 42.308 0.00 0.00 0.00 1.85
865 1027 3.884693 TCGGAACCTTGTTTAGTTTTCCC 59.115 43.478 0.00 0.00 33.46 3.97
869 1031 6.628621 CGGAACCTTGTTTAGTTTTCCCTTTT 60.629 38.462 0.00 0.00 33.46 2.27
893 1055 6.901615 TGATTTCCCTGGTTAGATCCTTTA 57.098 37.500 0.00 0.00 0.00 1.85
999 2260 1.226717 GAGTCCTTGTCGCGCCTAG 60.227 63.158 0.00 0.00 0.00 3.02
1056 2317 4.673375 CTGTGGGCCAAGGCTGCT 62.673 66.667 8.40 0.00 41.60 4.24
1092 2353 0.341961 ACCAGTACTATGCCCTCCCA 59.658 55.000 0.00 0.00 0.00 4.37
1405 2666 2.697229 CTGCATCTCTACATCACCCAGA 59.303 50.000 0.00 0.00 0.00 3.86
1423 2684 3.008375 CCAGATCCCCTGTATGTACATGG 59.992 52.174 18.81 10.87 41.33 3.66
1424 2685 3.648067 CAGATCCCCTGTATGTACATGGT 59.352 47.826 18.81 0.00 39.45 3.55
1471 2733 5.803795 GCTGAATTATCCTCTGCATCCTGAT 60.804 44.000 0.00 0.00 37.61 2.90
1472 2734 6.575847 GCTGAATTATCCTCTGCATCCTGATA 60.576 42.308 0.00 0.00 37.61 2.15
1473 2735 6.944096 TGAATTATCCTCTGCATCCTGATAG 58.056 40.000 0.00 0.00 0.00 2.08
1476 2738 6.842437 TTATCCTCTGCATCCTGATAGTAC 57.158 41.667 0.00 0.00 0.00 2.73
1560 2827 4.172505 GTGATTTGTTTGTCACAGCACAA 58.827 39.130 1.32 1.32 43.20 3.33
1564 2831 5.378292 TTTGTTTGTCACAGCACAAAGTA 57.622 34.783 11.57 0.00 44.91 2.24
1565 2832 5.574891 TTGTTTGTCACAGCACAAAGTAT 57.425 34.783 2.77 0.00 44.91 2.12
1651 2918 2.418746 CGTCATCCTTGGAGGTTCGAAT 60.419 50.000 0.00 0.00 36.53 3.34
1735 3002 6.942532 TTCAGCAGAAGTTGTAAGTTCATT 57.057 33.333 13.08 0.00 40.10 2.57
1757 3031 4.708177 TCCTGGAGCTGCTATTTTGTATC 58.292 43.478 6.82 0.00 0.00 2.24
1762 3041 6.516718 TGGAGCTGCTATTTTGTATCTACTC 58.483 40.000 6.82 0.00 0.00 2.59
1833 3113 5.858581 ACAAAGATTTGCAAGATCGTTTAGC 59.141 36.000 14.84 0.00 41.79 3.09
1885 3173 3.130633 GTTTTGTGAACCCAATTGCTCC 58.869 45.455 0.00 0.00 0.00 4.70
1887 3175 2.380064 TGTGAACCCAATTGCTCCTT 57.620 45.000 0.00 0.00 0.00 3.36
1888 3176 1.962807 TGTGAACCCAATTGCTCCTTG 59.037 47.619 0.00 0.00 0.00 3.61
1889 3177 0.968405 TGAACCCAATTGCTCCTTGC 59.032 50.000 0.00 0.00 43.25 4.01
1890 3178 1.260544 GAACCCAATTGCTCCTTGCT 58.739 50.000 0.00 0.00 43.37 3.91
1922 3217 2.616524 TGGTACACTTTGCTACTCCCT 58.383 47.619 0.00 0.00 0.00 4.20
1923 3218 2.565834 TGGTACACTTTGCTACTCCCTC 59.434 50.000 0.00 0.00 0.00 4.30
1924 3219 2.093606 GGTACACTTTGCTACTCCCTCC 60.094 54.545 0.00 0.00 0.00 4.30
1925 3220 0.608640 ACACTTTGCTACTCCCTCCG 59.391 55.000 0.00 0.00 0.00 4.63
1926 3221 0.608640 CACTTTGCTACTCCCTCCGT 59.391 55.000 0.00 0.00 0.00 4.69
1927 3222 1.002087 CACTTTGCTACTCCCTCCGTT 59.998 52.381 0.00 0.00 0.00 4.44
1928 3223 1.275573 ACTTTGCTACTCCCTCCGTTC 59.724 52.381 0.00 0.00 0.00 3.95
1929 3224 0.245539 TTTGCTACTCCCTCCGTTCG 59.754 55.000 0.00 0.00 0.00 3.95
1930 3225 1.601419 TTGCTACTCCCTCCGTTCGG 61.601 60.000 4.74 4.74 0.00 4.30
1931 3226 1.751927 GCTACTCCCTCCGTTCGGA 60.752 63.158 13.34 13.34 0.00 4.55
1932 3227 1.318158 GCTACTCCCTCCGTTCGGAA 61.318 60.000 14.79 0.04 33.41 4.30
1933 3228 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
1934 3229 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1935 3230 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1936 3231 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1937 3232 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1938 3233 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1939 3234 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1940 3235 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1941 3236 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1942 3237 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1943 3238 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1944 3239 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1945 3240 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1946 3241 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1947 3242 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1948 3243 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1949 3244 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
1950 3245 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
1951 3246 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
1952 3247 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
1953 3248 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
1954 3249 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
1955 3250 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
1956 3251 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
1957 3252 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
1958 3253 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
1959 3254 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
1960 3255 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
1961 3256 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
1962 3257 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
1963 3258 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
1964 3259 4.618912 CGCAGAAATGGATGTATCTAGACG 59.381 45.833 0.00 0.00 0.00 4.18
1965 3260 5.533482 GCAGAAATGGATGTATCTAGACGT 58.467 41.667 0.00 0.00 0.00 4.34
1966 3261 6.567891 CGCAGAAATGGATGTATCTAGACGTA 60.568 42.308 0.00 0.00 0.00 3.57
1967 3262 7.316640 GCAGAAATGGATGTATCTAGACGTAT 58.683 38.462 0.00 0.00 0.00 3.06
1968 3263 7.815068 GCAGAAATGGATGTATCTAGACGTATT 59.185 37.037 0.00 0.00 0.00 1.89
1969 3264 9.698309 CAGAAATGGATGTATCTAGACGTATTT 57.302 33.333 0.00 0.00 0.00 1.40
1986 3281 8.628280 AGACGTATTTTAGTTCTAGATACACCC 58.372 37.037 0.00 0.00 0.00 4.61
1987 3282 8.297470 ACGTATTTTAGTTCTAGATACACCCA 57.703 34.615 0.00 0.00 0.00 4.51
1988 3283 8.921205 ACGTATTTTAGTTCTAGATACACCCAT 58.079 33.333 0.00 0.00 0.00 4.00
1989 3284 9.760077 CGTATTTTAGTTCTAGATACACCCATT 57.240 33.333 0.00 0.00 0.00 3.16
1992 3287 9.628500 ATTTTAGTTCTAGATACACCCATTTCC 57.372 33.333 0.00 0.00 0.00 3.13
1993 3288 5.277857 AGTTCTAGATACACCCATTTCCG 57.722 43.478 0.00 0.00 0.00 4.30
1994 3289 4.960469 AGTTCTAGATACACCCATTTCCGA 59.040 41.667 0.00 0.00 0.00 4.55
1995 3290 5.069251 AGTTCTAGATACACCCATTTCCGAG 59.931 44.000 0.00 0.00 0.00 4.63
1996 3291 4.800023 TCTAGATACACCCATTTCCGAGA 58.200 43.478 0.00 0.00 0.00 4.04
1997 3292 3.821421 AGATACACCCATTTCCGAGAC 57.179 47.619 0.00 0.00 0.00 3.36
1998 3293 3.104512 AGATACACCCATTTCCGAGACA 58.895 45.455 0.00 0.00 0.00 3.41
1999 3294 3.517901 AGATACACCCATTTCCGAGACAA 59.482 43.478 0.00 0.00 0.00 3.18
2000 3295 1.892209 ACACCCATTTCCGAGACAAC 58.108 50.000 0.00 0.00 0.00 3.32
2001 3296 1.420138 ACACCCATTTCCGAGACAACT 59.580 47.619 0.00 0.00 0.00 3.16
2002 3297 2.635915 ACACCCATTTCCGAGACAACTA 59.364 45.455 0.00 0.00 0.00 2.24
2003 3298 3.071892 ACACCCATTTCCGAGACAACTAA 59.928 43.478 0.00 0.00 0.00 2.24
2004 3299 4.261801 CACCCATTTCCGAGACAACTAAT 58.738 43.478 0.00 0.00 0.00 1.73
2005 3300 4.700213 CACCCATTTCCGAGACAACTAATT 59.300 41.667 0.00 0.00 0.00 1.40
2006 3301 5.183140 CACCCATTTCCGAGACAACTAATTT 59.817 40.000 0.00 0.00 0.00 1.82
2007 3302 5.414765 ACCCATTTCCGAGACAACTAATTTC 59.585 40.000 0.00 0.00 0.00 2.17
2008 3303 5.447279 CCCATTTCCGAGACAACTAATTTCG 60.447 44.000 0.00 0.00 0.00 3.46
2009 3304 5.350365 CCATTTCCGAGACAACTAATTTCGA 59.650 40.000 0.00 0.00 33.38 3.71
2010 3305 6.128391 CCATTTCCGAGACAACTAATTTCGAA 60.128 38.462 0.00 0.00 33.38 3.71
2011 3306 5.834239 TTCCGAGACAACTAATTTCGAAC 57.166 39.130 0.00 0.00 33.38 3.95
2012 3307 3.916172 TCCGAGACAACTAATTTCGAACG 59.084 43.478 0.00 0.00 33.38 3.95
2013 3308 3.060363 CCGAGACAACTAATTTCGAACGG 59.940 47.826 0.00 0.00 33.38 4.44
2014 3309 3.916172 CGAGACAACTAATTTCGAACGGA 59.084 43.478 0.00 0.00 33.38 4.69
2015 3310 4.030306 CGAGACAACTAATTTCGAACGGAG 59.970 45.833 0.00 0.00 33.38 4.63
2016 3311 4.243270 AGACAACTAATTTCGAACGGAGG 58.757 43.478 0.00 0.00 0.00 4.30
2017 3312 3.332034 ACAACTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
2018 3313 3.007182 ACAACTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
2019 3314 3.521947 ACTAATTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
2044 3339 8.097038 AGTAGTTGACAACATGACATTAGTGAT 58.903 33.333 20.08 0.00 0.00 3.06
2049 3344 6.591448 TGACAACATGACATTAGTGATCACTC 59.409 38.462 31.09 17.18 42.54 3.51
2093 3397 4.654091 AGACTTGGAATTGGTGTGTTTG 57.346 40.909 0.00 0.00 0.00 2.93
2109 3413 8.739039 TGGTGTGTTTGGATATCTTTATTGAAG 58.261 33.333 2.05 0.00 36.67 3.02
2110 3414 7.702348 GGTGTGTTTGGATATCTTTATTGAAGC 59.298 37.037 2.05 0.00 35.24 3.86
2111 3415 8.243426 GTGTGTTTGGATATCTTTATTGAAGCA 58.757 33.333 2.05 0.00 35.24 3.91
2155 3460 5.720202 AGACGCTGTAGATGTTTGATACAA 58.280 37.500 0.00 0.00 40.89 2.41
2179 3484 9.270640 CAATTTTGAAGTTGGACCATTCATTTA 57.729 29.630 10.61 1.91 33.26 1.40
2253 3560 2.530297 CGTATCAGACGTTGGATTCGTG 59.470 50.000 15.95 1.43 46.86 4.35
2289 3596 2.473868 GCGTGGTGATACAACATTGTCG 60.474 50.000 0.00 0.00 42.35 4.35
2334 3641 1.298859 GCTGGTGTGTCGTTGGGATC 61.299 60.000 0.00 0.00 0.00 3.36
2346 3654 2.030274 CGTTGGGATCCAAGGTTTGTTC 60.030 50.000 15.23 0.00 44.82 3.18
2414 3741 4.572985 ATTTTCATGGATGTATGTGGCG 57.427 40.909 0.00 0.00 0.00 5.69
2586 3915 2.624364 TGCATTGCTGTCACACATTCTT 59.376 40.909 10.49 0.00 0.00 2.52
2729 4061 3.903530 ATTCCCTGACCCTTTCAAACT 57.096 42.857 0.00 0.00 32.21 2.66
2786 4133 3.070734 AGTGAGACAGCACATTCTTCACT 59.929 43.478 0.00 0.00 41.19 3.41
2945 4296 5.850557 TGAGCTCCTTTTCATTTTGTTCA 57.149 34.783 12.15 0.00 0.00 3.18
2991 4343 2.519013 GTTGACCTCCTCATTTTGCCT 58.481 47.619 0.00 0.00 0.00 4.75
3136 4490 5.173774 TGCTCTGCAAGTAAGAAAGTTTG 57.826 39.130 0.00 0.00 34.76 2.93
3178 4541 9.112725 CATTCTGATGTAAACCTGTCATGATAA 57.887 33.333 0.00 0.00 0.00 1.75
3179 4542 9.857656 ATTCTGATGTAAACCTGTCATGATAAT 57.142 29.630 0.00 0.00 0.00 1.28
3364 4730 7.642669 CCACACAGCTAGATTACATTAAATGG 58.357 38.462 0.00 0.00 33.60 3.16
3379 4745 8.193953 ACATTAAATGGTTCCTGATTCTTTGT 57.806 30.769 0.00 0.00 33.60 2.83
3439 4805 5.419471 AGGTGTCTTATCTCTGTTGTAGGAC 59.581 44.000 0.00 0.00 0.00 3.85
3528 4894 1.549203 AAGCCAGCATCCGTTGATTT 58.451 45.000 0.00 0.00 0.00 2.17
3579 4945 2.959516 TGAAGTTCTATGCTGTGTCCG 58.040 47.619 4.17 0.00 0.00 4.79
3735 5339 5.193679 ACCTATAAAGCCCTGTGATGTTTC 58.806 41.667 0.00 0.00 0.00 2.78
3787 5656 9.944663 GATTGTTAACTGTGTAATTCTTGTTCA 57.055 29.630 7.22 0.00 0.00 3.18
3824 5694 9.679661 GGAGAGAAGAAGAAAAGATAAGGAATT 57.320 33.333 0.00 0.00 0.00 2.17
3866 5737 1.676635 CTGACCATGTGCCCTGTGG 60.677 63.158 0.00 0.00 38.96 4.17
3867 5738 2.128290 CTGACCATGTGCCCTGTGGA 62.128 60.000 0.00 0.00 36.82 4.02
3889 5760 2.827921 GTCTGTCTCAAATGCCCCAAAT 59.172 45.455 0.00 0.00 0.00 2.32
3890 5761 4.016444 GTCTGTCTCAAATGCCCCAAATA 58.984 43.478 0.00 0.00 0.00 1.40
3891 5762 4.096984 GTCTGTCTCAAATGCCCCAAATAG 59.903 45.833 0.00 0.00 0.00 1.73
3892 5763 4.019174 CTGTCTCAAATGCCCCAAATAGT 58.981 43.478 0.00 0.00 0.00 2.12
3894 5765 5.575157 TGTCTCAAATGCCCCAAATAGTTA 58.425 37.500 0.00 0.00 0.00 2.24
3896 5767 6.667414 TGTCTCAAATGCCCCAAATAGTTAAT 59.333 34.615 0.00 0.00 0.00 1.40
3986 5858 5.363562 AATACTGCATCCTTCATGTCTGA 57.636 39.130 0.00 0.00 34.56 3.27
3998 5870 6.541278 TCCTTCATGTCTGATCAAATTAGCAG 59.459 38.462 0.00 0.00 34.16 4.24
4001 5873 5.587443 TCATGTCTGATCAAATTAGCAGGTG 59.413 40.000 0.00 0.00 33.68 4.00
4042 5916 9.570488 CACTCTAGTACTTTATGACCTGTTAAC 57.430 37.037 0.00 0.00 0.00 2.01
4075 5949 5.606348 ACAGTTGACAGTTCTTCTCTTCT 57.394 39.130 0.00 0.00 0.00 2.85
4097 5971 3.562250 CCTGGACAGGTGGTGACA 58.438 61.111 10.22 0.00 43.61 3.58
4098 5972 1.372683 CCTGGACAGGTGGTGACAG 59.627 63.158 10.22 0.00 44.46 3.51
4099 5973 1.410850 CCTGGACAGGTGGTGACAGT 61.411 60.000 10.22 0.00 44.46 3.55
4111 5985 4.357947 GACAGTCACCGGCGCAGA 62.358 66.667 10.83 0.00 0.00 4.26
4120 5994 2.491621 CGGCGCAGATCTGAGTGA 59.508 61.111 27.04 0.00 32.81 3.41
4126 6000 1.367659 GCAGATCTGAGTGAAGGCAC 58.632 55.000 27.04 0.27 45.49 5.01
4153 6027 4.378459 CGAAGTAACTTGGCAATCAGAACC 60.378 45.833 0.00 0.00 0.00 3.62
4158 6032 1.879380 CTTGGCAATCAGAACCGACAA 59.121 47.619 0.00 0.00 0.00 3.18
4159 6033 1.234821 TGGCAATCAGAACCGACAAC 58.765 50.000 0.00 0.00 0.00 3.32
4180 6054 3.373565 GCTTGGGTTTCTGGCCGG 61.374 66.667 4.71 4.71 0.00 6.13
4189 6063 1.172180 TTTCTGGCCGGTTTGCTCAG 61.172 55.000 12.43 2.21 33.51 3.35
4210 6084 0.749649 ACGGTGCTTCATTTTGGCAA 59.250 45.000 0.00 0.00 37.73 4.52
4224 6098 3.798650 GCAACATACTGCGCGGCA 61.799 61.111 18.15 2.92 36.92 5.69
4238 6112 1.961180 GCGGCAGACTGTGACCCTAT 61.961 60.000 3.99 0.00 0.00 2.57
4274 6148 6.351711 TCATCAAGATCCTCGTTCAAATCAT 58.648 36.000 0.00 0.00 0.00 2.45
4304 6178 2.477863 GGCATAATTTGTCACGCCTGAC 60.478 50.000 8.70 8.70 46.34 3.51
4321 6195 6.861055 ACGCCTGACTTAAACATGTTTAAATG 59.139 34.615 32.56 26.30 42.39 2.32
4322 6196 6.307800 CGCCTGACTTAAACATGTTTAAATGG 59.692 38.462 32.56 28.99 42.39 3.16
4425 6300 7.210174 TGTTAGCACTATACATCCAAGATCAC 58.790 38.462 0.00 0.00 0.00 3.06
4426 6301 5.876651 AGCACTATACATCCAAGATCACA 57.123 39.130 0.00 0.00 0.00 3.58
4485 6372 5.872070 GTGGTTTGTCAAAAATTTCTGTGGA 59.128 36.000 0.00 0.00 0.00 4.02
4561 6471 8.635765 TTTTTAGGCAGATCTCAATGTAGTTT 57.364 30.769 0.00 0.00 0.00 2.66
4608 6518 2.042686 TCAGTGAGTGCAGTGCTTTT 57.957 45.000 17.60 1.16 43.64 2.27
4622 6537 1.379527 GCTTTTGCAGTACGGGCTAT 58.620 50.000 12.69 0.00 46.58 2.97
4623 6538 2.557317 GCTTTTGCAGTACGGGCTATA 58.443 47.619 12.69 1.84 46.58 1.31
4642 6557 7.090173 GGCTATATGTTCTCAACAAAGCAAAA 58.910 34.615 16.85 0.00 45.86 2.44
4744 6662 7.039223 ACCCACTGTATATCCCTTTATTAGACG 60.039 40.741 0.00 0.00 0.00 4.18
4754 6674 5.126707 TCCCTTTATTAGACGAGGACAGTTC 59.873 44.000 0.00 0.00 0.00 3.01
4831 6756 9.438291 CTATGAGCTAACAAATGATTAAAACCG 57.562 33.333 0.00 0.00 0.00 4.44
4837 6762 6.763303 AACAAATGATTAAAACCGTCTTGC 57.237 33.333 0.00 0.00 0.00 4.01
4844 6769 7.266922 TGATTAAAACCGTCTTGCTTTAGTT 57.733 32.000 0.00 0.00 0.00 2.24
4845 6770 7.708998 TGATTAAAACCGTCTTGCTTTAGTTT 58.291 30.769 0.00 0.00 0.00 2.66
4847 6772 3.349488 AACCGTCTTGCTTTAGTTTGC 57.651 42.857 0.00 0.00 0.00 3.68
4884 6809 4.988540 GGAAATCTTGTTTTGGTTGTAGCC 59.011 41.667 0.00 0.00 0.00 3.93
4905 6830 4.843728 CCTACTGGTATTTTGCTTCCTCA 58.156 43.478 0.00 0.00 0.00 3.86
4906 6831 4.636206 CCTACTGGTATTTTGCTTCCTCAC 59.364 45.833 0.00 0.00 0.00 3.51
4922 6847 3.840078 TCCTCACCACATCTTCTGATTGA 59.160 43.478 0.00 0.00 0.00 2.57
4955 6880 2.543848 TGACAACGTGCAGAATTGACTC 59.456 45.455 10.62 1.42 0.00 3.36
4956 6881 2.802816 GACAACGTGCAGAATTGACTCT 59.197 45.455 10.62 0.00 0.00 3.24
4957 6882 3.987868 GACAACGTGCAGAATTGACTCTA 59.012 43.478 10.62 0.00 0.00 2.43
4958 6883 4.569943 ACAACGTGCAGAATTGACTCTAT 58.430 39.130 10.62 0.00 0.00 1.98
4959 6884 4.389992 ACAACGTGCAGAATTGACTCTATG 59.610 41.667 10.62 0.00 0.00 2.23
4960 6885 2.932614 ACGTGCAGAATTGACTCTATGC 59.067 45.455 0.00 0.00 0.00 3.14
4961 6886 2.931969 CGTGCAGAATTGACTCTATGCA 59.068 45.455 0.00 0.00 0.00 3.96
4962 6887 3.558829 CGTGCAGAATTGACTCTATGCAT 59.441 43.478 3.79 3.79 29.96 3.96
4963 6888 4.034858 CGTGCAGAATTGACTCTATGCATT 59.965 41.667 3.54 0.00 29.96 3.56
4964 6889 5.448225 CGTGCAGAATTGACTCTATGCATTT 60.448 40.000 3.54 0.00 29.96 2.32
4965 6890 6.327934 GTGCAGAATTGACTCTATGCATTTT 58.672 36.000 3.54 0.00 29.96 1.82
4966 6891 6.471519 GTGCAGAATTGACTCTATGCATTTTC 59.528 38.462 3.54 0.00 29.96 2.29
4967 6892 6.151480 TGCAGAATTGACTCTATGCATTTTCA 59.849 34.615 3.54 0.00 0.00 2.69
4968 6893 7.031372 GCAGAATTGACTCTATGCATTTTCAA 58.969 34.615 3.54 9.25 0.00 2.69
4969 6894 7.705325 GCAGAATTGACTCTATGCATTTTCAAT 59.295 33.333 3.54 11.10 35.67 2.57
4970 6895 9.582431 CAGAATTGACTCTATGCATTTTCAATT 57.418 29.630 23.56 23.56 43.15 2.32
4973 6898 9.582431 AATTGACTCTATGCATTTTCAATTCAG 57.418 29.630 20.60 6.40 38.64 3.02
4974 6899 7.692460 TGACTCTATGCATTTTCAATTCAGT 57.308 32.000 3.54 0.00 0.00 3.41
4975 6900 7.532571 TGACTCTATGCATTTTCAATTCAGTG 58.467 34.615 3.54 0.00 0.00 3.66
4976 6901 6.327934 ACTCTATGCATTTTCAATTCAGTGC 58.672 36.000 3.54 0.00 0.00 4.40
4977 6902 6.071784 ACTCTATGCATTTTCAATTCAGTGCA 60.072 34.615 3.54 0.03 45.28 4.57
4980 6905 4.884247 TGCATTTTCAATTCAGTGCATGA 58.116 34.783 0.00 0.00 37.63 3.07
4981 6906 5.483811 TGCATTTTCAATTCAGTGCATGAT 58.516 33.333 0.00 0.00 37.89 2.45
4982 6907 5.935206 TGCATTTTCAATTCAGTGCATGATT 59.065 32.000 0.00 0.00 37.89 2.57
4983 6908 6.428465 TGCATTTTCAATTCAGTGCATGATTT 59.572 30.769 0.00 0.00 37.89 2.17
4984 6909 7.041030 TGCATTTTCAATTCAGTGCATGATTTT 60.041 29.630 0.00 0.00 37.89 1.82
4985 6910 7.270365 GCATTTTCAATTCAGTGCATGATTTTG 59.730 33.333 0.00 3.41 37.89 2.44
4986 6911 7.789273 TTTTCAATTCAGTGCATGATTTTGT 57.211 28.000 0.00 0.00 37.89 2.83
4987 6912 6.772770 TTCAATTCAGTGCATGATTTTGTG 57.227 33.333 0.00 0.00 37.89 3.33
4988 6913 6.086785 TCAATTCAGTGCATGATTTTGTGA 57.913 33.333 0.00 0.00 37.89 3.58
4989 6914 6.514063 TCAATTCAGTGCATGATTTTGTGAA 58.486 32.000 0.00 0.00 37.89 3.18
4990 6915 6.421501 TCAATTCAGTGCATGATTTTGTGAAC 59.578 34.615 0.00 0.00 37.89 3.18
4991 6916 5.518848 TTCAGTGCATGATTTTGTGAACT 57.481 34.783 0.00 0.00 37.89 3.01
4992 6917 5.518848 TCAGTGCATGATTTTGTGAACTT 57.481 34.783 0.00 0.00 31.12 2.66
4993 6918 5.904941 TCAGTGCATGATTTTGTGAACTTT 58.095 33.333 0.00 0.00 31.12 2.66
4994 6919 6.339730 TCAGTGCATGATTTTGTGAACTTTT 58.660 32.000 0.00 0.00 31.12 2.27
4995 6920 6.817641 TCAGTGCATGATTTTGTGAACTTTTT 59.182 30.769 0.00 0.00 31.12 1.94
5022 6947 9.571810 TCATTATGCTGCTTAATGTTTACTTTG 57.428 29.630 30.81 15.62 37.95 2.77
5023 6948 8.810427 CATTATGCTGCTTAATGTTTACTTTGG 58.190 33.333 27.23 9.08 34.03 3.28
5024 6949 4.555262 TGCTGCTTAATGTTTACTTTGGC 58.445 39.130 0.00 0.00 0.00 4.52
5025 6950 4.038522 TGCTGCTTAATGTTTACTTTGGCA 59.961 37.500 0.00 0.00 0.00 4.92
5026 6951 5.170748 GCTGCTTAATGTTTACTTTGGCAT 58.829 37.500 0.00 0.00 0.00 4.40
5027 6952 5.639082 GCTGCTTAATGTTTACTTTGGCATT 59.361 36.000 0.00 0.00 35.90 3.56
5028 6953 6.147656 GCTGCTTAATGTTTACTTTGGCATTT 59.852 34.615 0.00 0.00 34.05 2.32
5029 6954 7.307930 GCTGCTTAATGTTTACTTTGGCATTTT 60.308 33.333 0.00 0.00 34.05 1.82
5030 6955 7.859598 TGCTTAATGTTTACTTTGGCATTTTG 58.140 30.769 0.00 0.00 34.05 2.44
5031 6956 7.041508 TGCTTAATGTTTACTTTGGCATTTTGG 60.042 33.333 0.00 0.00 34.05 3.28
5032 6957 7.172361 GCTTAATGTTTACTTTGGCATTTTGGA 59.828 33.333 0.00 0.00 34.05 3.53
5033 6958 6.859420 AATGTTTACTTTGGCATTTTGGAC 57.141 33.333 0.00 0.00 0.00 4.02
5034 6959 5.606348 TGTTTACTTTGGCATTTTGGACT 57.394 34.783 0.00 0.00 0.00 3.85
5035 6960 5.983540 TGTTTACTTTGGCATTTTGGACTT 58.016 33.333 0.00 0.00 0.00 3.01
5036 6961 7.113658 TGTTTACTTTGGCATTTTGGACTTA 57.886 32.000 0.00 0.00 0.00 2.24
5037 6962 6.981559 TGTTTACTTTGGCATTTTGGACTTAC 59.018 34.615 0.00 0.00 0.00 2.34
5038 6963 6.969993 TTACTTTGGCATTTTGGACTTACT 57.030 33.333 0.00 0.00 0.00 2.24
5039 6964 5.869649 ACTTTGGCATTTTGGACTTACTT 57.130 34.783 0.00 0.00 0.00 2.24
5040 6965 6.233905 ACTTTGGCATTTTGGACTTACTTT 57.766 33.333 0.00 0.00 0.00 2.66
5041 6966 6.649155 ACTTTGGCATTTTGGACTTACTTTT 58.351 32.000 0.00 0.00 0.00 2.27
5042 6967 7.109501 ACTTTGGCATTTTGGACTTACTTTTT 58.890 30.769 0.00 0.00 0.00 1.94
5043 6968 6.917217 TTGGCATTTTGGACTTACTTTTTG 57.083 33.333 0.00 0.00 0.00 2.44
5044 6969 5.983540 TGGCATTTTGGACTTACTTTTTGT 58.016 33.333 0.00 0.00 0.00 2.83
5045 6970 6.410540 TGGCATTTTGGACTTACTTTTTGTT 58.589 32.000 0.00 0.00 0.00 2.83
5046 6971 6.881602 TGGCATTTTGGACTTACTTTTTGTTT 59.118 30.769 0.00 0.00 0.00 2.83
5047 6972 8.041323 TGGCATTTTGGACTTACTTTTTGTTTA 58.959 29.630 0.00 0.00 0.00 2.01
5048 6973 8.547894 GGCATTTTGGACTTACTTTTTGTTTAG 58.452 33.333 0.00 0.00 0.00 1.85
5049 6974 9.308318 GCATTTTGGACTTACTTTTTGTTTAGA 57.692 29.630 0.00 0.00 0.00 2.10
5052 6977 9.849166 TTTTGGACTTACTTTTTGTTTAGACTG 57.151 29.630 0.00 0.00 0.00 3.51
5053 6978 7.562454 TGGACTTACTTTTTGTTTAGACTGG 57.438 36.000 0.00 0.00 0.00 4.00
5054 6979 7.114095 TGGACTTACTTTTTGTTTAGACTGGT 58.886 34.615 0.00 0.00 0.00 4.00
5055 6980 7.612633 TGGACTTACTTTTTGTTTAGACTGGTT 59.387 33.333 0.00 0.00 0.00 3.67
5056 6981 8.464404 GGACTTACTTTTTGTTTAGACTGGTTT 58.536 33.333 0.00 0.00 0.00 3.27
5057 6982 9.285770 GACTTACTTTTTGTTTAGACTGGTTTG 57.714 33.333 0.00 0.00 0.00 2.93
5058 6983 8.799367 ACTTACTTTTTGTTTAGACTGGTTTGT 58.201 29.630 0.00 0.00 0.00 2.83
5059 6984 9.634163 CTTACTTTTTGTTTAGACTGGTTTGTT 57.366 29.630 0.00 0.00 0.00 2.83
5060 6985 9.984190 TTACTTTTTGTTTAGACTGGTTTGTTT 57.016 25.926 0.00 0.00 0.00 2.83
5062 6987 9.984190 ACTTTTTGTTTAGACTGGTTTGTTTAA 57.016 25.926 0.00 0.00 0.00 1.52
5066 6991 9.796120 TTTGTTTAGACTGGTTTGTTTAATCTG 57.204 29.630 0.00 0.00 0.00 2.90
5067 6992 8.740123 TGTTTAGACTGGTTTGTTTAATCTGA 57.260 30.769 0.00 0.00 0.00 3.27
5068 6993 9.179909 TGTTTAGACTGGTTTGTTTAATCTGAA 57.820 29.630 0.00 0.00 0.00 3.02
5069 6994 9.665264 GTTTAGACTGGTTTGTTTAATCTGAAG 57.335 33.333 0.00 0.00 0.00 3.02
5070 6995 6.884280 AGACTGGTTTGTTTAATCTGAAGG 57.116 37.500 0.00 0.00 0.00 3.46
5071 6996 5.770162 AGACTGGTTTGTTTAATCTGAAGGG 59.230 40.000 0.00 0.00 0.00 3.95
5072 6997 4.280929 ACTGGTTTGTTTAATCTGAAGGGC 59.719 41.667 0.00 0.00 0.00 5.19
5073 6998 4.479158 TGGTTTGTTTAATCTGAAGGGCT 58.521 39.130 0.00 0.00 0.00 5.19
5074 6999 4.898861 TGGTTTGTTTAATCTGAAGGGCTT 59.101 37.500 0.00 0.00 0.00 4.35
5075 7000 5.221422 TGGTTTGTTTAATCTGAAGGGCTTG 60.221 40.000 0.00 0.00 0.00 4.01
5076 7001 4.519540 TTGTTTAATCTGAAGGGCTTGC 57.480 40.909 0.00 0.00 0.00 4.01
5077 7002 3.495331 TGTTTAATCTGAAGGGCTTGCA 58.505 40.909 0.00 0.00 0.00 4.08
5078 7003 3.894427 TGTTTAATCTGAAGGGCTTGCAA 59.106 39.130 0.00 0.00 0.00 4.08
5079 7004 4.022068 TGTTTAATCTGAAGGGCTTGCAAG 60.022 41.667 22.44 22.44 0.00 4.01
5080 7005 1.553706 AATCTGAAGGGCTTGCAAGG 58.446 50.000 27.10 9.26 0.00 3.61
5081 7006 0.407139 ATCTGAAGGGCTTGCAAGGT 59.593 50.000 27.10 0.00 0.00 3.50
5082 7007 1.064003 TCTGAAGGGCTTGCAAGGTA 58.936 50.000 27.10 0.00 0.00 3.08
5083 7008 1.635487 TCTGAAGGGCTTGCAAGGTAT 59.365 47.619 27.10 0.00 0.00 2.73
5084 7009 2.843730 TCTGAAGGGCTTGCAAGGTATA 59.156 45.455 27.10 0.00 0.00 1.47
5085 7010 3.265737 TCTGAAGGGCTTGCAAGGTATAA 59.734 43.478 27.10 0.00 0.00 0.98
5086 7011 4.016444 CTGAAGGGCTTGCAAGGTATAAA 58.984 43.478 27.10 0.00 0.00 1.40
5087 7012 4.016444 TGAAGGGCTTGCAAGGTATAAAG 58.984 43.478 27.10 0.54 0.00 1.85
5088 7013 3.739401 AGGGCTTGCAAGGTATAAAGT 57.261 42.857 27.10 0.00 0.00 2.66
5089 7014 4.047627 AGGGCTTGCAAGGTATAAAGTT 57.952 40.909 27.10 0.00 0.00 2.66
5090 7015 3.763897 AGGGCTTGCAAGGTATAAAGTTG 59.236 43.478 27.10 0.00 0.00 3.16
5091 7016 3.511699 GGCTTGCAAGGTATAAAGTTGC 58.488 45.455 27.10 9.30 45.56 4.17
5092 7017 3.193479 GGCTTGCAAGGTATAAAGTTGCT 59.807 43.478 27.10 0.00 45.56 3.91
5093 7018 4.398044 GGCTTGCAAGGTATAAAGTTGCTA 59.602 41.667 27.10 7.37 45.56 3.49
5094 7019 5.105917 GGCTTGCAAGGTATAAAGTTGCTAA 60.106 40.000 27.10 7.51 45.56 3.09
5095 7020 5.800438 GCTTGCAAGGTATAAAGTTGCTAAC 59.200 40.000 27.10 0.99 45.56 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.987404 CGGAAGGGTTCTCCAAATTTTAAAAA 59.013 34.615 4.44 0.00 38.24 1.94
51 52 6.324254 TCGGAAGGGTTCTCCAAATTTTAAAA 59.676 34.615 2.51 2.51 38.24 1.52
52 53 5.834204 TCGGAAGGGTTCTCCAAATTTTAAA 59.166 36.000 0.00 0.00 38.24 1.52
53 54 5.386924 TCGGAAGGGTTCTCCAAATTTTAA 58.613 37.500 0.00 0.00 38.24 1.52
55 56 3.839778 TCGGAAGGGTTCTCCAAATTTT 58.160 40.909 0.00 0.00 38.24 1.82
56 57 3.518992 TCGGAAGGGTTCTCCAAATTT 57.481 42.857 0.00 0.00 38.24 1.82
58 59 2.375509 ACTTCGGAAGGGTTCTCCAAAT 59.624 45.455 20.97 0.00 38.24 2.32
59 60 1.772453 ACTTCGGAAGGGTTCTCCAAA 59.228 47.619 20.97 0.00 38.24 3.28
63 64 2.299297 TCTCAACTTCGGAAGGGTTCTC 59.701 50.000 20.97 0.00 0.00 2.87
64 65 2.037381 GTCTCAACTTCGGAAGGGTTCT 59.963 50.000 20.97 0.00 0.00 3.01
65 66 2.224209 TGTCTCAACTTCGGAAGGGTTC 60.224 50.000 20.97 7.57 0.00 3.62
67 68 1.420430 TGTCTCAACTTCGGAAGGGT 58.580 50.000 20.97 6.55 0.00 4.34
68 69 2.543777 TTGTCTCAACTTCGGAAGGG 57.456 50.000 20.97 12.86 0.00 3.95
69 70 3.202906 TGTTTGTCTCAACTTCGGAAGG 58.797 45.455 20.97 5.30 0.00 3.46
70 71 5.237344 AGAATGTTTGTCTCAACTTCGGAAG 59.763 40.000 15.96 15.96 0.00 3.46
71 72 5.123227 AGAATGTTTGTCTCAACTTCGGAA 58.877 37.500 0.00 0.00 0.00 4.30
73 74 5.424121 AAGAATGTTTGTCTCAACTTCGG 57.576 39.130 0.00 0.00 0.00 4.30
75 76 6.795399 TCCAAAGAATGTTTGTCTCAACTTC 58.205 36.000 2.22 0.00 0.00 3.01
76 77 6.773976 TCCAAAGAATGTTTGTCTCAACTT 57.226 33.333 2.22 0.00 0.00 2.66
77 78 6.773976 TTCCAAAGAATGTTTGTCTCAACT 57.226 33.333 2.22 0.00 0.00 3.16
119 120 4.642885 AGGGTTCTCGATTTTTGTTCACAA 59.357 37.500 0.00 0.00 0.00 3.33
120 121 4.204012 AGGGTTCTCGATTTTTGTTCACA 58.796 39.130 0.00 0.00 0.00 3.58
121 122 4.830826 AGGGTTCTCGATTTTTGTTCAC 57.169 40.909 0.00 0.00 0.00 3.18
122 123 4.277423 GGAAGGGTTCTCGATTTTTGTTCA 59.723 41.667 0.00 0.00 0.00 3.18
124 125 3.252458 CGGAAGGGTTCTCGATTTTTGTT 59.748 43.478 0.00 0.00 0.00 2.83
125 126 2.812011 CGGAAGGGTTCTCGATTTTTGT 59.188 45.455 0.00 0.00 0.00 2.83
126 127 3.071479 TCGGAAGGGTTCTCGATTTTTG 58.929 45.455 0.00 0.00 30.97 2.44
129 130 4.439968 GTTATCGGAAGGGTTCTCGATTT 58.560 43.478 14.13 1.28 40.71 2.17
133 134 1.402968 TCGTTATCGGAAGGGTTCTCG 59.597 52.381 0.00 0.00 37.69 4.04
135 136 2.454538 ACTCGTTATCGGAAGGGTTCT 58.545 47.619 0.00 0.00 37.69 3.01
136 137 2.955477 ACTCGTTATCGGAAGGGTTC 57.045 50.000 0.00 0.00 37.69 3.62
137 138 2.692041 CCTACTCGTTATCGGAAGGGTT 59.308 50.000 0.00 0.00 37.69 4.11
138 139 2.092212 TCCTACTCGTTATCGGAAGGGT 60.092 50.000 8.53 0.00 37.69 4.34
139 140 2.579873 TCCTACTCGTTATCGGAAGGG 58.420 52.381 8.53 0.00 37.69 3.95
140 141 4.850347 AATCCTACTCGTTATCGGAAGG 57.150 45.455 0.00 0.00 37.69 3.46
143 144 4.478843 CGAAATCCTACTCGTTATCGGA 57.521 45.455 0.00 0.00 37.69 4.55
145 146 2.978489 GCCGAAATCCTACTCGTTATCG 59.022 50.000 0.00 0.00 33.17 2.92
148 149 1.410153 GGGCCGAAATCCTACTCGTTA 59.590 52.381 0.00 0.00 33.17 3.18
151 152 0.249489 CTGGGCCGAAATCCTACTCG 60.249 60.000 0.00 0.00 34.83 4.18
152 153 0.106894 CCTGGGCCGAAATCCTACTC 59.893 60.000 0.00 0.00 0.00 2.59
154 155 1.526225 GCCTGGGCCGAAATCCTAC 60.526 63.158 0.00 0.00 34.56 3.18
155 156 2.915869 GCCTGGGCCGAAATCCTA 59.084 61.111 0.00 0.00 34.56 2.94
165 166 1.973812 GAAACTCACAGGCCTGGGC 60.974 63.158 35.42 15.70 41.06 5.36
166 167 0.890996 GTGAAACTCACAGGCCTGGG 60.891 60.000 35.42 33.07 46.22 4.45
167 168 2.633860 GTGAAACTCACAGGCCTGG 58.366 57.895 35.42 23.77 46.22 4.45
177 178 1.226746 CCCAGAACCACGTGAAACTC 58.773 55.000 19.30 7.54 31.75 3.01
178 179 0.818040 GCCCAGAACCACGTGAAACT 60.818 55.000 19.30 9.71 31.75 2.66
179 180 1.652563 GCCCAGAACCACGTGAAAC 59.347 57.895 19.30 7.41 0.00 2.78
180 181 1.527380 GGCCCAGAACCACGTGAAA 60.527 57.895 19.30 0.00 0.00 2.69
182 183 4.308458 CGGCCCAGAACCACGTGA 62.308 66.667 19.30 0.00 0.00 4.35
188 189 2.960359 GAATAGGCCGGCCCAGAACC 62.960 65.000 41.72 21.75 36.58 3.62
189 190 1.526225 GAATAGGCCGGCCCAGAAC 60.526 63.158 41.72 24.46 36.58 3.01
190 191 0.399376 TAGAATAGGCCGGCCCAGAA 60.399 55.000 41.72 24.87 36.58 3.02
193 194 0.181824 GTTTAGAATAGGCCGGCCCA 59.818 55.000 41.72 31.32 36.58 5.36
195 196 1.134189 ACAGTTTAGAATAGGCCGGCC 60.134 52.381 39.29 39.29 0.00 6.13
196 197 2.210961 GACAGTTTAGAATAGGCCGGC 58.789 52.381 21.18 21.18 0.00 6.13
197 198 2.484947 GGGACAGTTTAGAATAGGCCGG 60.485 54.545 0.00 0.00 0.00 6.13
198 199 2.802057 CGGGACAGTTTAGAATAGGCCG 60.802 54.545 0.00 0.00 0.00 6.13
199 200 2.433239 TCGGGACAGTTTAGAATAGGCC 59.567 50.000 0.00 0.00 0.00 5.19
200 201 3.814005 TCGGGACAGTTTAGAATAGGC 57.186 47.619 0.00 0.00 0.00 3.93
201 202 7.146648 GTCTTATCGGGACAGTTTAGAATAGG 58.853 42.308 0.00 0.00 34.23 2.57
202 203 7.146648 GGTCTTATCGGGACAGTTTAGAATAG 58.853 42.308 0.00 0.00 35.61 1.73
204 205 5.451520 CGGTCTTATCGGGACAGTTTAGAAT 60.452 44.000 0.00 0.00 35.61 2.40
205 206 4.142315 CGGTCTTATCGGGACAGTTTAGAA 60.142 45.833 0.00 0.00 35.61 2.10
206 207 3.379372 CGGTCTTATCGGGACAGTTTAGA 59.621 47.826 0.00 0.00 35.61 2.10
207 208 3.703420 CGGTCTTATCGGGACAGTTTAG 58.297 50.000 0.00 0.00 35.61 1.85
209 210 1.405121 GCGGTCTTATCGGGACAGTTT 60.405 52.381 0.00 0.00 35.61 2.66
210 211 0.175073 GCGGTCTTATCGGGACAGTT 59.825 55.000 0.00 0.00 35.61 3.16
211 212 1.673808 GGCGGTCTTATCGGGACAGT 61.674 60.000 0.00 0.00 35.61 3.55
212 213 1.067582 GGCGGTCTTATCGGGACAG 59.932 63.158 0.00 0.00 35.61 3.51
213 214 2.777972 CGGCGGTCTTATCGGGACA 61.778 63.158 0.00 0.00 35.61 4.02
214 215 2.027169 CGGCGGTCTTATCGGGAC 59.973 66.667 0.00 0.00 0.00 4.46
215 216 3.908081 GCGGCGGTCTTATCGGGA 61.908 66.667 9.78 0.00 0.00 5.14
218 219 2.467946 ATACGGCGGCGGTCTTATCG 62.468 60.000 35.05 4.63 0.00 2.92
221 222 0.528249 GAAATACGGCGGCGGTCTTA 60.528 55.000 35.05 18.65 0.00 2.10
222 223 1.812507 GAAATACGGCGGCGGTCTT 60.813 57.895 35.05 22.98 0.00 3.01
224 225 3.267118 GGAAATACGGCGGCGGTC 61.267 66.667 35.05 23.71 0.00 4.79
226 227 2.965462 GAGGAAATACGGCGGCGG 60.965 66.667 35.05 17.25 0.00 6.13
227 228 2.965462 GGAGGAAATACGGCGGCG 60.965 66.667 31.06 31.06 0.00 6.46
228 229 2.965462 CGGAGGAAATACGGCGGC 60.965 66.667 13.24 0.00 0.00 6.53
255 256 1.544825 CGAGAGCAGGGGTGGAAGAA 61.545 60.000 0.00 0.00 0.00 2.52
303 304 2.829003 CGAGCTGACCCTCCGCTA 60.829 66.667 0.00 0.00 33.47 4.26
357 358 1.515304 GCGCGAGAGAGAGAACCAC 60.515 63.158 12.10 0.00 0.00 4.16
358 359 2.878429 GCGCGAGAGAGAGAACCA 59.122 61.111 12.10 0.00 0.00 3.67
360 361 2.947109 GCGCGCGAGAGAGAGAAC 60.947 66.667 37.18 7.60 31.43 3.01
436 528 7.484140 TCAGAACACAGTAGATGTTATGCTAG 58.516 38.462 7.45 0.00 44.90 3.42
451 543 7.864686 TGTTACAGATTGAAATCAGAACACAG 58.135 34.615 5.86 0.00 37.89 3.66
452 544 7.800155 TGTTACAGATTGAAATCAGAACACA 57.200 32.000 5.86 1.93 37.89 3.72
453 545 8.506437 TGATGTTACAGATTGAAATCAGAACAC 58.494 33.333 14.42 11.04 36.86 3.32
454 546 8.620116 TGATGTTACAGATTGAAATCAGAACA 57.380 30.769 14.45 14.45 37.63 3.18
455 547 9.897744 TTTGATGTTACAGATTGAAATCAGAAC 57.102 29.630 5.86 6.74 37.89 3.01
487 583 7.714377 GCATGGAGCAATATATAAGTAGATGCT 59.286 37.037 5.68 5.68 44.79 3.79
488 584 7.859598 GCATGGAGCAATATATAAGTAGATGC 58.140 38.462 0.00 0.00 44.79 3.91
513 612 7.723270 GCAAATAGTGTGCTGAGTTAAAATTG 58.277 34.615 0.00 0.00 39.00 2.32
593 725 2.644299 ACCAATGGAGTCAATGGAGTCA 59.356 45.455 6.16 0.00 44.70 3.41
608 740 5.811399 TTTTAGATAGCGAACCACCAATG 57.189 39.130 0.00 0.00 0.00 2.82
687 848 4.439968 GGTGGCACCTTCTTACTGTATAC 58.560 47.826 29.22 0.00 34.73 1.47
692 853 0.320374 TCGGTGGCACCTTCTTACTG 59.680 55.000 32.28 15.48 35.66 2.74
693 854 1.053424 TTCGGTGGCACCTTCTTACT 58.947 50.000 32.28 0.00 35.66 2.24
697 858 2.871096 TTTATTCGGTGGCACCTTCT 57.129 45.000 32.28 18.77 35.66 2.85
788 950 9.900112 AGAGATTACCTAATTATCCTTGGTAGT 57.100 33.333 2.02 0.00 35.12 2.73
800 962 9.520515 TTTCTGCTCAAAAGAGATTACCTAATT 57.479 29.630 0.00 0.00 0.00 1.40
805 967 8.084684 ACAAATTTCTGCTCAAAAGAGATTACC 58.915 33.333 0.00 0.00 30.59 2.85
834 996 5.700722 AAACAAGGTTCCGATTAACTTCC 57.299 39.130 0.00 0.00 0.00 3.46
835 997 7.430992 ACTAAACAAGGTTCCGATTAACTTC 57.569 36.000 0.00 0.00 0.00 3.01
858 1020 5.063204 CCAGGGAAATCAAAAAGGGAAAAC 58.937 41.667 0.00 0.00 0.00 2.43
865 1027 6.665248 AGGATCTAACCAGGGAAATCAAAAAG 59.335 38.462 0.00 0.00 0.00 2.27
869 1031 5.796502 AAGGATCTAACCAGGGAAATCAA 57.203 39.130 0.00 0.00 0.00 2.57
893 1055 6.721208 TCCAGCTGTATCAGAAAAATCCTTTT 59.279 34.615 13.81 0.00 37.46 2.27
903 1065 5.028549 GGAAGATTCCAGCTGTATCAGAA 57.971 43.478 21.38 14.29 46.76 3.02
1025 2286 4.681978 ACAGGACGCCGTCTTGCC 62.682 66.667 26.50 6.94 42.22 4.52
1028 2289 4.003788 CCCACAGGACGCCGTCTT 62.004 66.667 17.76 6.63 33.47 3.01
1048 2309 4.416738 GGCCGAGGAAGCAGCCTT 62.417 66.667 0.00 0.00 42.34 4.35
1092 2353 2.203480 TGCGGCTTGCCCTTCTTT 60.203 55.556 6.02 0.00 45.60 2.52
1472 2734 9.502091 TTTGAACAAATGCTAAGATGTAGTACT 57.498 29.630 0.00 0.00 0.00 2.73
1473 2735 9.760660 CTTTGAACAAATGCTAAGATGTAGTAC 57.239 33.333 0.44 0.00 0.00 2.73
1509 2774 0.746063 CTGCAGCAGTCCCAAAAACA 59.254 50.000 14.90 0.00 0.00 2.83
1635 2902 1.651737 TCCATTCGAACCTCCAAGGA 58.348 50.000 0.00 0.00 37.67 3.36
1651 2918 1.212688 CCATGGTATCCAGCTGTTCCA 59.787 52.381 13.81 14.65 36.75 3.53
1735 3002 4.410228 AGATACAAAATAGCAGCTCCAGGA 59.590 41.667 0.00 0.00 0.00 3.86
1885 3173 1.174712 CCACACTTCCACCCAGCAAG 61.175 60.000 0.00 0.00 0.00 4.01
1887 3175 1.057275 TACCACACTTCCACCCAGCA 61.057 55.000 0.00 0.00 0.00 4.41
1888 3176 0.605589 GTACCACACTTCCACCCAGC 60.606 60.000 0.00 0.00 0.00 4.85
1889 3177 0.762418 TGTACCACACTTCCACCCAG 59.238 55.000 0.00 0.00 0.00 4.45
1890 3178 0.470766 GTGTACCACACTTCCACCCA 59.529 55.000 2.22 0.00 45.27 4.51
1912 3207 2.050350 CCGAACGGAGGGAGTAGCA 61.050 63.158 7.53 0.00 37.50 3.49
1915 3210 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
1916 3211 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
1917 3212 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1918 3213 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1919 3214 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1920 3215 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1921 3216 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1922 3217 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
1923 3218 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1924 3219 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1925 3220 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
1926 3221 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
1927 3222 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
1928 3223 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
1929 3224 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
1930 3225 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
1931 3226 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
1932 3227 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
1933 3228 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
1934 3229 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
1935 3230 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
1936 3231 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
1937 3232 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
1938 3233 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
1939 3234 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
1940 3235 5.562890 CGTCTAGATACATCCATTTCTGCGA 60.563 44.000 0.00 0.00 0.00 5.10
1941 3236 4.618912 CGTCTAGATACATCCATTTCTGCG 59.381 45.833 0.00 0.00 0.00 5.18
1942 3237 5.533482 ACGTCTAGATACATCCATTTCTGC 58.467 41.667 0.00 0.00 0.00 4.26
1943 3238 9.698309 AAATACGTCTAGATACATCCATTTCTG 57.302 33.333 0.00 0.00 0.00 3.02
1960 3255 8.628280 GGGTGTATCTAGAACTAAAATACGTCT 58.372 37.037 0.00 0.00 0.00 4.18
1961 3256 8.408601 TGGGTGTATCTAGAACTAAAATACGTC 58.591 37.037 0.00 0.00 0.00 4.34
1962 3257 8.297470 TGGGTGTATCTAGAACTAAAATACGT 57.703 34.615 0.00 0.00 0.00 3.57
1963 3258 9.760077 AATGGGTGTATCTAGAACTAAAATACG 57.240 33.333 0.00 0.00 0.00 3.06
1966 3261 9.628500 GGAAATGGGTGTATCTAGAACTAAAAT 57.372 33.333 0.00 0.00 0.00 1.82
1967 3262 7.767198 CGGAAATGGGTGTATCTAGAACTAAAA 59.233 37.037 0.00 0.00 0.00 1.52
1968 3263 7.124599 TCGGAAATGGGTGTATCTAGAACTAAA 59.875 37.037 0.00 0.00 0.00 1.85
1969 3264 6.608405 TCGGAAATGGGTGTATCTAGAACTAA 59.392 38.462 0.00 0.00 0.00 2.24
1970 3265 6.131264 TCGGAAATGGGTGTATCTAGAACTA 58.869 40.000 0.00 0.00 0.00 2.24
1971 3266 4.960469 TCGGAAATGGGTGTATCTAGAACT 59.040 41.667 0.00 0.00 0.00 3.01
1972 3267 5.068723 TCTCGGAAATGGGTGTATCTAGAAC 59.931 44.000 0.00 0.00 0.00 3.01
1973 3268 5.068723 GTCTCGGAAATGGGTGTATCTAGAA 59.931 44.000 0.00 0.00 0.00 2.10
1974 3269 4.583489 GTCTCGGAAATGGGTGTATCTAGA 59.417 45.833 0.00 0.00 0.00 2.43
1975 3270 4.341235 TGTCTCGGAAATGGGTGTATCTAG 59.659 45.833 0.00 0.00 0.00 2.43
1976 3271 4.283337 TGTCTCGGAAATGGGTGTATCTA 58.717 43.478 0.00 0.00 0.00 1.98
1977 3272 3.104512 TGTCTCGGAAATGGGTGTATCT 58.895 45.455 0.00 0.00 0.00 1.98
1978 3273 3.536956 TGTCTCGGAAATGGGTGTATC 57.463 47.619 0.00 0.00 0.00 2.24
1979 3274 3.263425 AGTTGTCTCGGAAATGGGTGTAT 59.737 43.478 0.00 0.00 0.00 2.29
1980 3275 2.635915 AGTTGTCTCGGAAATGGGTGTA 59.364 45.455 0.00 0.00 0.00 2.90
1981 3276 1.420138 AGTTGTCTCGGAAATGGGTGT 59.580 47.619 0.00 0.00 0.00 4.16
1982 3277 2.185004 AGTTGTCTCGGAAATGGGTG 57.815 50.000 0.00 0.00 0.00 4.61
1983 3278 4.569719 ATTAGTTGTCTCGGAAATGGGT 57.430 40.909 0.00 0.00 0.00 4.51
1984 3279 5.447279 CGAAATTAGTTGTCTCGGAAATGGG 60.447 44.000 0.00 0.00 0.00 4.00
1985 3280 5.350365 TCGAAATTAGTTGTCTCGGAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
1986 3281 6.403333 TCGAAATTAGTTGTCTCGGAAATG 57.597 37.500 0.00 0.00 0.00 2.32
1987 3282 6.400727 CGTTCGAAATTAGTTGTCTCGGAAAT 60.401 38.462 0.00 0.00 0.00 2.17
1988 3283 5.107760 CGTTCGAAATTAGTTGTCTCGGAAA 60.108 40.000 0.00 0.00 0.00 3.13
1989 3284 4.383649 CGTTCGAAATTAGTTGTCTCGGAA 59.616 41.667 0.00 0.00 0.00 4.30
1990 3285 3.916172 CGTTCGAAATTAGTTGTCTCGGA 59.084 43.478 0.00 0.00 0.00 4.55
1991 3286 3.060363 CCGTTCGAAATTAGTTGTCTCGG 59.940 47.826 0.00 0.00 0.00 4.63
1992 3287 3.916172 TCCGTTCGAAATTAGTTGTCTCG 59.084 43.478 0.00 0.00 0.00 4.04
1993 3288 4.326548 CCTCCGTTCGAAATTAGTTGTCTC 59.673 45.833 0.00 0.00 0.00 3.36
1994 3289 4.243270 CCTCCGTTCGAAATTAGTTGTCT 58.757 43.478 0.00 0.00 0.00 3.41
1995 3290 3.370061 CCCTCCGTTCGAAATTAGTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
1996 3291 3.007182 TCCCTCCGTTCGAAATTAGTTGT 59.993 43.478 0.00 0.00 0.00 3.32
1997 3292 3.592059 TCCCTCCGTTCGAAATTAGTTG 58.408 45.455 0.00 0.00 0.00 3.16
1998 3293 3.260128 ACTCCCTCCGTTCGAAATTAGTT 59.740 43.478 0.00 0.00 0.00 2.24
1999 3294 2.830321 ACTCCCTCCGTTCGAAATTAGT 59.170 45.455 0.00 0.00 0.00 2.24
2000 3295 3.521947 ACTCCCTCCGTTCGAAATTAG 57.478 47.619 0.00 0.00 0.00 1.73
2001 3296 4.019174 ACTACTCCCTCCGTTCGAAATTA 58.981 43.478 0.00 0.00 0.00 1.40
2002 3297 2.830321 ACTACTCCCTCCGTTCGAAATT 59.170 45.455 0.00 0.00 0.00 1.82
2003 3298 2.454538 ACTACTCCCTCCGTTCGAAAT 58.545 47.619 0.00 0.00 0.00 2.17
2004 3299 1.915141 ACTACTCCCTCCGTTCGAAA 58.085 50.000 0.00 0.00 0.00 3.46
2005 3300 1.542915 CAACTACTCCCTCCGTTCGAA 59.457 52.381 0.00 0.00 0.00 3.71
2006 3301 1.171308 CAACTACTCCCTCCGTTCGA 58.829 55.000 0.00 0.00 0.00 3.71
2007 3302 1.135460 GTCAACTACTCCCTCCGTTCG 60.135 57.143 0.00 0.00 0.00 3.95
2008 3303 1.891150 TGTCAACTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
2009 3304 2.005370 TGTCAACTACTCCCTCCGTT 57.995 50.000 0.00 0.00 0.00 4.44
2010 3305 1.617357 GTTGTCAACTACTCCCTCCGT 59.383 52.381 8.53 0.00 0.00 4.69
2011 3306 1.616865 TGTTGTCAACTACTCCCTCCG 59.383 52.381 16.45 0.00 0.00 4.63
2012 3307 3.260884 TCATGTTGTCAACTACTCCCTCC 59.739 47.826 16.45 0.00 0.00 4.30
2013 3308 4.246458 GTCATGTTGTCAACTACTCCCTC 58.754 47.826 16.45 0.00 0.00 4.30
2014 3309 3.646162 TGTCATGTTGTCAACTACTCCCT 59.354 43.478 16.45 0.00 0.00 4.20
2015 3310 4.002906 TGTCATGTTGTCAACTACTCCC 57.997 45.455 16.45 1.52 0.00 4.30
2016 3311 6.874134 ACTAATGTCATGTTGTCAACTACTCC 59.126 38.462 16.45 2.46 0.00 3.85
2017 3312 7.598869 TCACTAATGTCATGTTGTCAACTACTC 59.401 37.037 16.45 6.06 0.00 2.59
2018 3313 7.441836 TCACTAATGTCATGTTGTCAACTACT 58.558 34.615 16.45 0.00 0.00 2.57
2019 3314 7.652300 TCACTAATGTCATGTTGTCAACTAC 57.348 36.000 16.45 11.91 0.00 2.73
2044 3339 0.320050 TACTGCGCATTGGTGAGTGA 59.680 50.000 12.24 0.00 0.00 3.41
2049 3344 0.881118 AAACCTACTGCGCATTGGTG 59.119 50.000 23.40 10.43 0.00 4.17
2093 3397 8.734386 CCCAGTTATGCTTCAATAAAGATATCC 58.266 37.037 0.00 0.00 37.12 2.59
2109 3413 1.212935 AGTGTGATCCCCCAGTTATGC 59.787 52.381 0.00 0.00 0.00 3.14
2110 3414 3.652057 AAGTGTGATCCCCCAGTTATG 57.348 47.619 0.00 0.00 0.00 1.90
2111 3415 5.036916 TCTAAAGTGTGATCCCCCAGTTAT 58.963 41.667 0.00 0.00 0.00 1.89
2155 3460 9.439500 CATAAATGAATGGTCCAACTTCAAAAT 57.561 29.630 11.13 4.14 33.03 1.82
2179 3484 6.212955 AGCAAATTAGTAACAACGCAAACAT 58.787 32.000 0.00 0.00 0.00 2.71
2233 3540 2.281762 GCACGAATCCAACGTCTGATAC 59.718 50.000 0.00 0.00 42.07 2.24
2241 3548 0.871722 TCCTTTGCACGAATCCAACG 59.128 50.000 0.00 0.00 0.00 4.10
2247 3554 0.883833 CTGGCTTCCTTTGCACGAAT 59.116 50.000 0.00 0.00 0.00 3.34
2253 3560 3.752339 CGCCCTGGCTTCCTTTGC 61.752 66.667 6.60 0.00 39.32 3.68
2289 3596 6.273071 AGTAATTTTGTCAAAACAGCTCACC 58.727 36.000 12.86 0.00 36.57 4.02
2334 3641 4.144297 TGATTCTGGAGAACAAACCTTGG 58.856 43.478 0.00 0.00 36.80 3.61
2346 3654 4.204799 TGGATCTGCAAATGATTCTGGAG 58.795 43.478 0.00 3.71 32.69 3.86
2523 3852 3.058639 GCACAAAGAGGTGACAGTTCATC 60.059 47.826 0.00 0.00 41.32 2.92
2586 3915 3.117474 TGGTGGACAAATACAAGGGTTCA 60.117 43.478 0.00 0.00 0.00 3.18
2729 4061 4.714308 AGGAATGAAAACCAACCTTGTTCA 59.286 37.500 0.00 0.00 33.86 3.18
2786 4133 4.908601 AAAGGTACACCATGATGACTCA 57.091 40.909 0.00 0.00 38.89 3.41
3130 4482 5.072741 TGCTAGGAATGAGAAAGCAAACTT 58.927 37.500 0.00 0.00 40.05 2.66
3136 4490 5.121811 TCAGAATGCTAGGAATGAGAAAGC 58.878 41.667 0.00 0.00 34.76 3.51
3148 4502 6.108687 TGACAGGTTTACATCAGAATGCTAG 58.891 40.000 0.00 0.00 36.26 3.42
3178 4541 7.062322 TCTTATCCTGCCATCAAAACACATAT 58.938 34.615 0.00 0.00 0.00 1.78
3179 4542 6.422333 TCTTATCCTGCCATCAAAACACATA 58.578 36.000 0.00 0.00 0.00 2.29
3180 4543 5.263599 TCTTATCCTGCCATCAAAACACAT 58.736 37.500 0.00 0.00 0.00 3.21
3219 4582 7.549134 TGTGACTAATGGATGTTCAAGTGATAC 59.451 37.037 0.00 0.00 0.00 2.24
3364 4730 4.836125 TTGCTCACAAAGAATCAGGAAC 57.164 40.909 0.00 0.00 31.21 3.62
3379 4745 7.994911 ACTTCTTGTATCCATAATCATTGCTCA 59.005 33.333 0.00 0.00 0.00 4.26
3439 4805 1.089920 GCTGGTACTCACAAGCCATG 58.910 55.000 0.00 0.00 44.83 3.66
3528 4894 2.983907 TCACCGTGGAACTGTAAACA 57.016 45.000 0.00 0.00 30.39 2.83
3579 4945 2.849294 ACTTCAAGAACCAGCCTCTC 57.151 50.000 0.00 0.00 0.00 3.20
3697 5065 6.037940 GCTTTATAGGTTTGTTACAGGCTACC 59.962 42.308 0.00 0.00 0.00 3.18
3795 5664 9.494055 TCCTTATCTTTTCTTCTTCTCTCCATA 57.506 33.333 0.00 0.00 0.00 2.74
3796 5665 8.386012 TCCTTATCTTTTCTTCTTCTCTCCAT 57.614 34.615 0.00 0.00 0.00 3.41
3824 5694 8.839343 CAGAGTTATCATATTTATTGTGTGCCA 58.161 33.333 0.00 0.00 0.00 4.92
3842 5712 2.092753 CAGGGCACATGGTCAGAGTTAT 60.093 50.000 0.00 0.00 0.00 1.89
3866 5737 1.003580 TGGGGCATTTGAGACAGACTC 59.996 52.381 0.00 0.00 45.11 3.36
3867 5738 1.067295 TGGGGCATTTGAGACAGACT 58.933 50.000 0.00 0.00 0.00 3.24
3889 5760 8.573035 CCTTGAAAAGTGGCAAAGTATTAACTA 58.427 33.333 0.00 0.00 44.25 2.24
3890 5761 7.286775 TCCTTGAAAAGTGGCAAAGTATTAACT 59.713 33.333 0.00 0.00 44.25 2.24
3891 5762 7.430441 TCCTTGAAAAGTGGCAAAGTATTAAC 58.570 34.615 0.00 0.00 44.25 2.01
3892 5763 7.589958 TCCTTGAAAAGTGGCAAAGTATTAA 57.410 32.000 0.00 0.00 44.25 1.40
3894 5765 6.127196 TGTTCCTTGAAAAGTGGCAAAGTATT 60.127 34.615 0.00 0.00 44.25 1.89
3896 5767 4.707448 TGTTCCTTGAAAAGTGGCAAAGTA 59.293 37.500 0.00 0.00 44.25 2.24
3998 5870 4.100189 AGAGTGGTACTGAGCATTATCACC 59.900 45.833 7.40 1.63 35.06 4.02
4001 5873 6.642707 ACTAGAGTGGTACTGAGCATTATC 57.357 41.667 0.00 0.00 35.06 1.75
4096 5970 2.887568 GATCTGCGCCGGTGACTG 60.888 66.667 21.76 13.87 0.00 3.51
4097 5971 3.071206 AGATCTGCGCCGGTGACT 61.071 61.111 21.76 6.25 0.00 3.41
4098 5972 2.887568 CAGATCTGCGCCGGTGAC 60.888 66.667 21.76 10.95 0.00 3.67
4099 5973 3.068064 TCAGATCTGCGCCGGTGA 61.068 61.111 21.76 0.09 0.00 4.02
4120 5994 3.131396 CAAGTTACTTCGACAGTGCCTT 58.869 45.455 0.00 8.31 35.97 4.35
4126 6000 3.745975 TGATTGCCAAGTTACTTCGACAG 59.254 43.478 0.00 0.00 0.00 3.51
4153 6027 1.264288 GAAACCCAAGCTCAGTTGTCG 59.736 52.381 0.00 0.00 0.00 4.35
4158 6032 0.538287 GCCAGAAACCCAAGCTCAGT 60.538 55.000 0.00 0.00 0.00 3.41
4159 6033 1.246737 GGCCAGAAACCCAAGCTCAG 61.247 60.000 0.00 0.00 0.00 3.35
4180 6054 2.050985 GCACCGTGCTGAGCAAAC 60.051 61.111 9.51 0.00 41.47 2.93
4189 6063 1.284297 GCCAAAATGAAGCACCGTGC 61.284 55.000 16.04 16.04 45.46 5.34
4219 6093 1.961180 ATAGGGTCACAGTCTGCCGC 61.961 60.000 0.00 0.00 0.00 6.53
4220 6094 0.179100 CATAGGGTCACAGTCTGCCG 60.179 60.000 0.00 0.00 0.00 5.69
4221 6095 1.137872 CTCATAGGGTCACAGTCTGCC 59.862 57.143 0.00 0.00 0.00 4.85
4224 6098 3.708631 CCATTCTCATAGGGTCACAGTCT 59.291 47.826 0.00 0.00 0.00 3.24
4226 6100 2.171448 GCCATTCTCATAGGGTCACAGT 59.829 50.000 0.00 0.00 0.00 3.55
4228 6102 1.490490 GGCCATTCTCATAGGGTCACA 59.510 52.381 0.00 0.00 0.00 3.58
4238 6112 3.937778 TCTTGATGATGGCCATTCTCA 57.062 42.857 21.84 21.41 35.17 3.27
4321 6195 4.016444 TCATTGGCACTTGTTATCCTTCC 58.984 43.478 0.00 0.00 0.00 3.46
4322 6196 4.096984 CCTCATTGGCACTTGTTATCCTTC 59.903 45.833 0.00 0.00 0.00 3.46
4346 6220 6.410243 GCTACTGTAAGCTTGAAAGTTAGG 57.590 41.667 9.86 5.43 39.50 2.69
4425 6300 3.063180 GCGAAGTCCTCTGAATCATTGTG 59.937 47.826 0.00 0.00 0.00 3.33
4426 6301 3.265791 GCGAAGTCCTCTGAATCATTGT 58.734 45.455 0.00 0.00 0.00 2.71
4485 6372 4.105057 TGGTAATTACCCTTGTGACCACTT 59.895 41.667 28.00 0.00 45.87 3.16
4561 6471 0.466555 AACGCCCCAGTTGCAAGTTA 60.467 50.000 3.38 0.00 32.39 2.24
4608 6518 2.963101 AGAACATATAGCCCGTACTGCA 59.037 45.455 6.96 0.00 0.00 4.41
4622 6537 9.474920 CCTTTATTTTGCTTTGTTGAGAACATA 57.525 29.630 0.00 0.00 41.79 2.29
4623 6538 7.442062 CCCTTTATTTTGCTTTGTTGAGAACAT 59.558 33.333 0.00 0.00 41.79 2.71
4642 6557 5.998363 GCAGCTGCTACTATTAACCCTTTAT 59.002 40.000 31.33 0.00 38.21 1.40
4717 6635 8.657712 GTCTAATAAAGGGATATACAGTGGGTT 58.342 37.037 0.00 0.00 0.00 4.11
4744 6662 2.503356 AGATGATGGTGGAACTGTCCTC 59.497 50.000 0.00 0.00 45.22 3.71
4754 6674 4.562347 GCCTACACTGATAGATGATGGTGG 60.562 50.000 0.00 0.00 0.00 4.61
4831 6756 3.045688 GCACTGCAAACTAAAGCAAGAC 58.954 45.455 0.00 0.00 40.73 3.01
4847 6772 2.298163 AGATTTCCTTTTGGCAGCACTG 59.702 45.455 0.00 0.00 40.12 3.66
4884 6809 4.636206 GGTGAGGAAGCAAAATACCAGTAG 59.364 45.833 0.00 0.00 0.00 2.57
4931 6856 4.754618 AGTCAATTCTGCACGTTGTCATTA 59.245 37.500 0.00 0.00 0.00 1.90
4934 6859 2.543848 GAGTCAATTCTGCACGTTGTCA 59.456 45.455 0.00 0.00 0.00 3.58
4958 6883 4.884247 TCATGCACTGAATTGAAAATGCA 58.116 34.783 0.00 0.00 46.19 3.96
4959 6884 6.417191 AATCATGCACTGAATTGAAAATGC 57.583 33.333 0.00 0.00 37.44 3.56
4960 6885 8.286800 ACAAAATCATGCACTGAATTGAAAATG 58.713 29.630 21.08 11.07 37.80 2.32
4961 6886 8.286800 CACAAAATCATGCACTGAATTGAAAAT 58.713 29.630 21.08 7.91 37.80 1.82
4962 6887 7.494952 TCACAAAATCATGCACTGAATTGAAAA 59.505 29.630 21.08 11.40 37.80 2.29
4963 6888 6.985059 TCACAAAATCATGCACTGAATTGAAA 59.015 30.769 21.08 12.75 37.80 2.69
4964 6889 6.514063 TCACAAAATCATGCACTGAATTGAA 58.486 32.000 21.08 12.94 37.80 2.69
4965 6890 6.086785 TCACAAAATCATGCACTGAATTGA 57.913 33.333 21.08 10.04 37.80 2.57
4966 6891 6.422701 AGTTCACAAAATCATGCACTGAATTG 59.577 34.615 16.90 16.90 39.15 2.32
4967 6892 6.518493 AGTTCACAAAATCATGCACTGAATT 58.482 32.000 0.00 0.00 37.44 2.17
4968 6893 6.092955 AGTTCACAAAATCATGCACTGAAT 57.907 33.333 0.00 0.00 37.44 2.57
4969 6894 5.518848 AGTTCACAAAATCATGCACTGAA 57.481 34.783 0.00 0.00 37.44 3.02
4970 6895 5.518848 AAGTTCACAAAATCATGCACTGA 57.481 34.783 0.00 0.00 38.53 3.41
4971 6896 6.592798 AAAAGTTCACAAAATCATGCACTG 57.407 33.333 0.00 0.00 0.00 3.66
4996 6921 9.571810 CAAAGTAAACATTAAGCAGCATAATGA 57.428 29.630 28.76 10.62 41.25 2.57
4997 6922 8.810427 CCAAAGTAAACATTAAGCAGCATAATG 58.190 33.333 22.99 22.99 43.29 1.90
4998 6923 7.492344 GCCAAAGTAAACATTAAGCAGCATAAT 59.508 33.333 0.00 0.00 0.00 1.28
4999 6924 6.811170 GCCAAAGTAAACATTAAGCAGCATAA 59.189 34.615 0.00 0.00 0.00 1.90
5000 6925 6.071672 TGCCAAAGTAAACATTAAGCAGCATA 60.072 34.615 0.00 0.00 0.00 3.14
5001 6926 5.170748 GCCAAAGTAAACATTAAGCAGCAT 58.829 37.500 0.00 0.00 0.00 3.79
5002 6927 4.038522 TGCCAAAGTAAACATTAAGCAGCA 59.961 37.500 0.00 0.00 0.00 4.41
5003 6928 4.555262 TGCCAAAGTAAACATTAAGCAGC 58.445 39.130 0.00 0.00 0.00 5.25
5004 6929 7.656707 AAATGCCAAAGTAAACATTAAGCAG 57.343 32.000 0.00 0.00 32.63 4.24
5005 6930 7.041508 CCAAAATGCCAAAGTAAACATTAAGCA 60.042 33.333 0.00 0.00 32.63 3.91
5006 6931 7.172361 TCCAAAATGCCAAAGTAAACATTAAGC 59.828 33.333 0.00 0.00 32.63 3.09
5007 6932 8.495148 GTCCAAAATGCCAAAGTAAACATTAAG 58.505 33.333 0.00 0.00 32.63 1.85
5008 6933 8.207545 AGTCCAAAATGCCAAAGTAAACATTAA 58.792 29.630 0.00 0.00 32.63 1.40
5009 6934 7.731054 AGTCCAAAATGCCAAAGTAAACATTA 58.269 30.769 0.00 0.00 32.63 1.90
5010 6935 6.591001 AGTCCAAAATGCCAAAGTAAACATT 58.409 32.000 0.00 0.00 34.30 2.71
5011 6936 6.173427 AGTCCAAAATGCCAAAGTAAACAT 57.827 33.333 0.00 0.00 0.00 2.71
5012 6937 5.606348 AGTCCAAAATGCCAAAGTAAACA 57.394 34.783 0.00 0.00 0.00 2.83
5013 6938 7.207383 AGTAAGTCCAAAATGCCAAAGTAAAC 58.793 34.615 0.00 0.00 0.00 2.01
5014 6939 7.354751 AGTAAGTCCAAAATGCCAAAGTAAA 57.645 32.000 0.00 0.00 0.00 2.01
5015 6940 6.969993 AGTAAGTCCAAAATGCCAAAGTAA 57.030 33.333 0.00 0.00 0.00 2.24
5016 6941 6.969993 AAGTAAGTCCAAAATGCCAAAGTA 57.030 33.333 0.00 0.00 0.00 2.24
5017 6942 5.869649 AAGTAAGTCCAAAATGCCAAAGT 57.130 34.783 0.00 0.00 0.00 2.66
5018 6943 7.065683 ACAAAAAGTAAGTCCAAAATGCCAAAG 59.934 33.333 0.00 0.00 0.00 2.77
5019 6944 6.881602 ACAAAAAGTAAGTCCAAAATGCCAAA 59.118 30.769 0.00 0.00 0.00 3.28
5020 6945 6.410540 ACAAAAAGTAAGTCCAAAATGCCAA 58.589 32.000 0.00 0.00 0.00 4.52
5021 6946 5.983540 ACAAAAAGTAAGTCCAAAATGCCA 58.016 33.333 0.00 0.00 0.00 4.92
5022 6947 6.918892 AACAAAAAGTAAGTCCAAAATGCC 57.081 33.333 0.00 0.00 0.00 4.40
5023 6948 9.308318 TCTAAACAAAAAGTAAGTCCAAAATGC 57.692 29.630 0.00 0.00 0.00 3.56
5026 6951 9.849166 CAGTCTAAACAAAAAGTAAGTCCAAAA 57.151 29.630 0.00 0.00 0.00 2.44
5027 6952 8.463607 CCAGTCTAAACAAAAAGTAAGTCCAAA 58.536 33.333 0.00 0.00 0.00 3.28
5028 6953 7.612633 ACCAGTCTAAACAAAAAGTAAGTCCAA 59.387 33.333 0.00 0.00 0.00 3.53
5029 6954 7.114095 ACCAGTCTAAACAAAAAGTAAGTCCA 58.886 34.615 0.00 0.00 0.00 4.02
5030 6955 7.563888 ACCAGTCTAAACAAAAAGTAAGTCC 57.436 36.000 0.00 0.00 0.00 3.85
5031 6956 9.285770 CAAACCAGTCTAAACAAAAAGTAAGTC 57.714 33.333 0.00 0.00 0.00 3.01
5032 6957 8.799367 ACAAACCAGTCTAAACAAAAAGTAAGT 58.201 29.630 0.00 0.00 0.00 2.24
5033 6958 9.634163 AACAAACCAGTCTAAACAAAAAGTAAG 57.366 29.630 0.00 0.00 0.00 2.34
5034 6959 9.984190 AAACAAACCAGTCTAAACAAAAAGTAA 57.016 25.926 0.00 0.00 0.00 2.24
5036 6961 9.984190 TTAAACAAACCAGTCTAAACAAAAAGT 57.016 25.926 0.00 0.00 0.00 2.66
5040 6965 9.796120 CAGATTAAACAAACCAGTCTAAACAAA 57.204 29.630 0.00 0.00 0.00 2.83
5041 6966 9.179909 TCAGATTAAACAAACCAGTCTAAACAA 57.820 29.630 0.00 0.00 0.00 2.83
5042 6967 8.740123 TCAGATTAAACAAACCAGTCTAAACA 57.260 30.769 0.00 0.00 0.00 2.83
5043 6968 9.665264 CTTCAGATTAAACAAACCAGTCTAAAC 57.335 33.333 0.00 0.00 0.00 2.01
5044 6969 8.846211 CCTTCAGATTAAACAAACCAGTCTAAA 58.154 33.333 0.00 0.00 0.00 1.85
5045 6970 7.447238 CCCTTCAGATTAAACAAACCAGTCTAA 59.553 37.037 0.00 0.00 0.00 2.10
5046 6971 6.940298 CCCTTCAGATTAAACAAACCAGTCTA 59.060 38.462 0.00 0.00 0.00 2.59
5047 6972 5.770162 CCCTTCAGATTAAACAAACCAGTCT 59.230 40.000 0.00 0.00 0.00 3.24
5048 6973 5.564848 GCCCTTCAGATTAAACAAACCAGTC 60.565 44.000 0.00 0.00 0.00 3.51
5049 6974 4.280929 GCCCTTCAGATTAAACAAACCAGT 59.719 41.667 0.00 0.00 0.00 4.00
5050 6975 4.524328 AGCCCTTCAGATTAAACAAACCAG 59.476 41.667 0.00 0.00 0.00 4.00
5051 6976 4.479158 AGCCCTTCAGATTAAACAAACCA 58.521 39.130 0.00 0.00 0.00 3.67
5052 6977 5.230182 CAAGCCCTTCAGATTAAACAAACC 58.770 41.667 0.00 0.00 0.00 3.27
5053 6978 4.686091 GCAAGCCCTTCAGATTAAACAAAC 59.314 41.667 0.00 0.00 0.00 2.93
5054 6979 4.343526 TGCAAGCCCTTCAGATTAAACAAA 59.656 37.500 0.00 0.00 0.00 2.83
5055 6980 3.894427 TGCAAGCCCTTCAGATTAAACAA 59.106 39.130 0.00 0.00 0.00 2.83
5056 6981 3.495331 TGCAAGCCCTTCAGATTAAACA 58.505 40.909 0.00 0.00 0.00 2.83
5057 6982 4.488879 CTTGCAAGCCCTTCAGATTAAAC 58.511 43.478 14.65 0.00 0.00 2.01
5058 6983 3.511146 CCTTGCAAGCCCTTCAGATTAAA 59.489 43.478 21.43 0.00 0.00 1.52
5059 6984 3.091545 CCTTGCAAGCCCTTCAGATTAA 58.908 45.455 21.43 0.00 0.00 1.40
5060 6985 2.041620 ACCTTGCAAGCCCTTCAGATTA 59.958 45.455 21.43 0.00 0.00 1.75
5061 6986 1.203100 ACCTTGCAAGCCCTTCAGATT 60.203 47.619 21.43 0.00 0.00 2.40
5062 6987 0.407139 ACCTTGCAAGCCCTTCAGAT 59.593 50.000 21.43 0.00 0.00 2.90
5063 6988 1.064003 TACCTTGCAAGCCCTTCAGA 58.936 50.000 21.43 0.00 0.00 3.27
5064 6989 2.134789 ATACCTTGCAAGCCCTTCAG 57.865 50.000 21.43 7.95 0.00 3.02
5065 6990 3.730215 TTATACCTTGCAAGCCCTTCA 57.270 42.857 21.43 1.96 0.00 3.02
5066 6991 4.017126 ACTTTATACCTTGCAAGCCCTTC 58.983 43.478 21.43 0.00 0.00 3.46
5067 6992 4.047627 ACTTTATACCTTGCAAGCCCTT 57.952 40.909 21.43 7.68 0.00 3.95
5068 6993 3.739401 ACTTTATACCTTGCAAGCCCT 57.261 42.857 21.43 9.25 0.00 5.19
5069 6994 3.676049 GCAACTTTATACCTTGCAAGCCC 60.676 47.826 21.43 0.00 40.09 5.19
5070 6995 3.193479 AGCAACTTTATACCTTGCAAGCC 59.807 43.478 21.43 0.00 42.32 4.35
5071 6996 4.440839 AGCAACTTTATACCTTGCAAGC 57.559 40.909 21.43 5.86 42.32 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.