Multiple sequence alignment - TraesCS2B01G601600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G601600 chr2B 100.000 1794 0 0 981 2774 784305200 784303407 0.000000e+00 3314.0
1 TraesCS2B01G601600 chr2B 99.841 628 1 0 1564 2191 784305759 784306386 0.000000e+00 1155.0
2 TraesCS2B01G601600 chr2B 100.000 422 0 0 1 422 784304196 784304617 0.000000e+00 780.0
3 TraesCS2B01G601600 chr2B 100.000 422 0 0 1 422 784306180 784305759 0.000000e+00 780.0
4 TraesCS2B01G601600 chr2B 98.776 245 2 1 2531 2774 30521631 30521387 4.240000e-118 435.0
5 TraesCS2B01G601600 chr2B 93.469 245 15 1 2531 2774 773736018 773736262 2.030000e-96 363.0
6 TraesCS2B01G601600 chr2B 99.174 121 1 0 2287 2407 30521750 30521630 4.650000e-53 219.0
7 TraesCS2B01G601600 chr2B 94.891 137 7 0 2396 2532 764499660 764499796 6.020000e-52 215.0
8 TraesCS2B01G601600 chr3A 99.587 1212 4 1 981 2191 691599352 691600563 0.000000e+00 2209.0
9 TraesCS2B01G601600 chr3A 99.763 422 1 0 1 422 691600356 691599935 0.000000e+00 774.0
10 TraesCS2B01G601600 chr3A 92.653 245 17 1 2531 2774 701941073 701940829 4.400000e-93 351.0
11 TraesCS2B01G601600 chr3A 95.588 136 5 1 2400 2535 681617900 681617766 1.670000e-52 217.0
12 TraesCS2B01G601600 chr3A 95.833 120 5 0 2288 2407 701941191 701941072 7.840000e-46 195.0
13 TraesCS2B01G601600 chr7B 99.340 1213 6 2 981 2192 728283736 728284947 0.000000e+00 2194.0
14 TraesCS2B01G601600 chr7B 99.289 422 3 0 1 422 728284740 728284319 0.000000e+00 763.0
15 TraesCS2B01G601600 chr7B 95.370 108 4 1 2190 2296 713954286 713954393 1.320000e-38 171.0
16 TraesCS2B01G601600 chr7B 84.971 173 19 6 2014 2180 440244502 440244673 4.750000e-38 169.0
17 TraesCS2B01G601600 chr7B 96.117 103 3 1 2195 2296 707846279 707846177 1.710000e-37 167.0
18 TraesCS2B01G601600 chr7B 96.117 103 3 1 2195 2296 707847480 707847378 1.710000e-37 167.0
19 TraesCS2B01G601600 chr7B 96.117 103 3 1 2195 2296 707848681 707848579 1.710000e-37 167.0
20 TraesCS2B01G601600 chr7B 95.283 106 4 1 2192 2296 713955489 713955594 1.710000e-37 167.0
21 TraesCS2B01G601600 chr7B 95.455 44 2 0 2364 2407 28065028 28065071 1.380000e-08 71.3
22 TraesCS2B01G601600 chr6B 99.257 1212 8 1 981 2191 21122051 21123262 0.000000e+00 2187.0
23 TraesCS2B01G601600 chr6B 99.526 422 2 0 1 422 21123055 21122634 0.000000e+00 769.0
24 TraesCS2B01G601600 chr6B 99.184 245 1 1 2531 2774 125540400 125540156 9.120000e-120 440.0
25 TraesCS2B01G601600 chr6B 95.556 135 5 1 2401 2535 93433774 93433641 6.020000e-52 215.0
26 TraesCS2B01G601600 chr6B 98.333 120 2 0 2288 2407 125540518 125540399 7.780000e-51 211.0
27 TraesCS2B01G601600 chr4B 98.267 1212 20 1 981 2192 415769580 415768370 0.000000e+00 2121.0
28 TraesCS2B01G601600 chr4B 98.578 422 6 0 1 422 415768576 415768997 0.000000e+00 747.0
29 TraesCS2B01G601600 chr4B 93.478 92 4 2 2287 2377 600606380 600606470 4.820000e-28 135.0
30 TraesCS2B01G601600 chrUn 98.944 1136 11 1 1058 2192 75400718 75399583 0.000000e+00 2030.0
31 TraesCS2B01G601600 chrUn 99.598 746 3 0 981 1726 454946809 454946064 0.000000e+00 1362.0
32 TraesCS2B01G601600 chrUn 99.052 422 4 0 1 422 75399791 75400212 0.000000e+00 758.0
33 TraesCS2B01G601600 chrUn 100.000 163 0 0 260 422 454946064 454946226 4.490000e-78 302.0
34 TraesCS2B01G601600 chrUn 97.692 130 3 0 2403 2532 183130878 183131007 1.000000e-54 224.0
35 TraesCS2B01G601600 chr3B 98.611 1080 11 2 1103 2179 555152983 555154061 0.000000e+00 1908.0
36 TraesCS2B01G601600 chr3B 98.815 422 5 0 1 422 555153865 555153444 0.000000e+00 752.0
37 TraesCS2B01G601600 chr3B 95.035 141 6 1 2403 2542 656597571 656597711 1.290000e-53 220.0
38 TraesCS2B01G601600 chr3B 94.286 140 6 2 2393 2532 582286082 582285945 2.160000e-51 213.0
39 TraesCS2B01G601600 chr3B 95.283 106 4 1 2192 2296 827136741 827136846 1.710000e-37 167.0
40 TraesCS2B01G601600 chr5B 99.040 521 5 0 981 1501 37112733 37113253 0.000000e+00 935.0
41 TraesCS2B01G601600 chr5B 96.133 181 3 3 2013 2192 37113254 37113431 2.700000e-75 292.0
42 TraesCS2B01G601600 chr5A 79.607 814 119 34 1342 2129 537994856 537995648 8.740000e-150 540.0
43 TraesCS2B01G601600 chr5A 80.711 394 56 13 1 392 537995483 537995108 3.500000e-74 289.0
44 TraesCS2B01G601600 chr1A 95.918 245 9 1 2531 2774 551669924 551670168 2.000000e-106 396.0
45 TraesCS2B01G601600 chr1A 94.286 140 8 0 2399 2538 35531103 35530964 6.020000e-52 215.0
46 TraesCS2B01G601600 chr1A 87.826 115 14 0 2293 2407 54510534 54510648 4.820000e-28 135.0
47 TraesCS2B01G601600 chr1A 80.000 100 19 1 2673 2772 84019555 84019457 3.830000e-09 73.1
48 TraesCS2B01G601600 chr1D 93.469 245 15 1 2531 2774 66387745 66387989 2.030000e-96 363.0
49 TraesCS2B01G601600 chr1D 98.347 121 2 0 2287 2407 66387626 66387746 2.160000e-51 213.0
50 TraesCS2B01G601600 chr5D 86.179 246 23 8 2531 2773 289415180 289415417 3.550000e-64 255.0
51 TraesCS2B01G601600 chr5D 83.065 124 21 0 2284 2407 289415058 289415181 2.260000e-21 113.0
52 TraesCS2B01G601600 chr7A 86.531 245 16 7 2531 2774 97407468 97407696 1.280000e-63 254.0
53 TraesCS2B01G601600 chr7A 97.297 111 3 0 2288 2398 97406814 97406924 3.650000e-44 189.0
54 TraesCS2B01G601600 chr7A 96.875 96 3 0 981 1076 536711826 536711921 7.950000e-36 161.0
55 TraesCS2B01G601600 chr4A 97.015 134 4 0 2399 2532 58534062 58534195 2.780000e-55 226.0
56 TraesCS2B01G601600 chr4A 96.117 103 3 1 2195 2296 644614286 644614184 1.710000e-37 167.0
57 TraesCS2B01G601600 chr4A 96.117 103 3 1 2195 2296 644615486 644615384 1.710000e-37 167.0
58 TraesCS2B01G601600 chr4A 95.283 106 4 1 2192 2296 730520470 730520575 1.710000e-37 167.0
59 TraesCS2B01G601600 chr2A 96.296 135 5 0 2402 2536 43500218 43500352 3.600000e-54 222.0
60 TraesCS2B01G601600 chr2A 80.800 250 35 11 2531 2774 16257864 16257622 1.700000e-42 183.0
61 TraesCS2B01G601600 chr4D 95.833 96 4 0 981 1076 3303357 3303452 3.700000e-34 156.0
62 TraesCS2B01G601600 chr3D 95.833 96 4 0 981 1076 548542858 548542763 3.700000e-34 156.0
63 TraesCS2B01G601600 chr3D 90.625 64 5 1 1197 1260 563594016 563593954 1.770000e-12 84.2
64 TraesCS2B01G601600 chr1B 100.000 36 0 0 2531 2566 630471332 630471297 1.780000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G601600 chr2B 784303407 784306180 2773 True 2047.0 3314 100.0000 1 2774 2 chr2B.!!$R2 2773
1 TraesCS2B01G601600 chr2B 784304196 784306386 2190 False 967.5 1155 99.9205 1 2191 2 chr2B.!!$F3 2190
2 TraesCS2B01G601600 chr3A 691599352 691600563 1211 False 2209.0 2209 99.5870 981 2191 1 chr3A.!!$F1 1210
3 TraesCS2B01G601600 chr7B 728283736 728284947 1211 False 2194.0 2194 99.3400 981 2192 1 chr7B.!!$F3 1211
4 TraesCS2B01G601600 chr6B 21122051 21123262 1211 False 2187.0 2187 99.2570 981 2191 1 chr6B.!!$F1 1210
5 TraesCS2B01G601600 chr4B 415768370 415769580 1210 True 2121.0 2121 98.2670 981 2192 1 chr4B.!!$R1 1211
6 TraesCS2B01G601600 chrUn 75399583 75400718 1135 True 2030.0 2030 98.9440 1058 2192 1 chrUn.!!$R1 1134
7 TraesCS2B01G601600 chrUn 454946064 454946809 745 True 1362.0 1362 99.5980 981 1726 1 chrUn.!!$R2 745
8 TraesCS2B01G601600 chr3B 555152983 555154061 1078 False 1908.0 1908 98.6110 1103 2179 1 chr3B.!!$F1 1076
9 TraesCS2B01G601600 chr5B 37112733 37113431 698 False 613.5 935 97.5865 981 2192 2 chr5B.!!$F1 1211
10 TraesCS2B01G601600 chr5A 537994856 537995648 792 False 540.0 540 79.6070 1342 2129 1 chr5A.!!$F1 787
11 TraesCS2B01G601600 chr7A 97406814 97407696 882 False 221.5 254 91.9140 2288 2774 2 chr7A.!!$F2 486

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.174617 TCCATAGCGACACATGCGAA 59.825 50.0 0.0 0.0 37.44 4.70 F
351 352 0.175760 TTCTTCCGAGGGCGAGATTG 59.824 55.0 0.0 0.0 40.82 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1562 2245 3.312421 TGCTGCAACTTCTACAACTTCAC 59.688 43.478 0.0 0.0 0.00 3.18 R
2216 3616 0.175989 CGGCTAACCTGGTCTTCCTC 59.824 60.000 0.0 0.0 34.23 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.606631 AGTTTTATGATGAACTAGATGGAGAAC 57.393 33.333 0.00 0.00 34.52 3.01
37 38 9.383519 GTTTTATGATGAACTAGATGGAGAACA 57.616 33.333 0.00 0.00 0.00 3.18
42 43 8.078060 TGATGAACTAGATGGAGAACATAACA 57.922 34.615 0.00 0.00 40.72 2.41
43 44 8.539544 TGATGAACTAGATGGAGAACATAACAA 58.460 33.333 0.00 0.00 40.72 2.83
44 45 9.553064 GATGAACTAGATGGAGAACATAACAAT 57.447 33.333 0.00 0.00 40.72 2.71
46 47 9.817809 TGAACTAGATGGAGAACATAACAATAC 57.182 33.333 0.00 0.00 40.72 1.89
47 48 9.817809 GAACTAGATGGAGAACATAACAATACA 57.182 33.333 0.00 0.00 40.72 2.29
49 50 9.601217 ACTAGATGGAGAACATAACAATACAAC 57.399 33.333 0.00 0.00 40.72 3.32
50 51 9.599866 CTAGATGGAGAACATAACAATACAACA 57.400 33.333 0.00 0.00 40.72 3.33
51 52 8.498054 AGATGGAGAACATAACAATACAACAG 57.502 34.615 0.00 0.00 40.72 3.16
52 53 8.103305 AGATGGAGAACATAACAATACAACAGT 58.897 33.333 0.00 0.00 40.72 3.55
53 54 7.667043 TGGAGAACATAACAATACAACAGTC 57.333 36.000 0.00 0.00 0.00 3.51
54 55 6.653320 TGGAGAACATAACAATACAACAGTCC 59.347 38.462 0.00 0.00 0.00 3.85
55 56 6.653320 GGAGAACATAACAATACAACAGTCCA 59.347 38.462 0.00 0.00 0.00 4.02
56 57 7.336931 GGAGAACATAACAATACAACAGTCCAT 59.663 37.037 0.00 0.00 0.00 3.41
57 58 9.378551 GAGAACATAACAATACAACAGTCCATA 57.621 33.333 0.00 0.00 0.00 2.74
58 59 9.383519 AGAACATAACAATACAACAGTCCATAG 57.616 33.333 0.00 0.00 0.00 2.23
59 60 7.553881 ACATAACAATACAACAGTCCATAGC 57.446 36.000 0.00 0.00 0.00 2.97
60 61 6.257849 ACATAACAATACAACAGTCCATAGCG 59.742 38.462 0.00 0.00 0.00 4.26
61 62 4.465632 ACAATACAACAGTCCATAGCGA 57.534 40.909 0.00 0.00 0.00 4.93
62 63 4.181578 ACAATACAACAGTCCATAGCGAC 58.818 43.478 0.00 0.00 0.00 5.19
63 64 4.180817 CAATACAACAGTCCATAGCGACA 58.819 43.478 0.00 0.00 35.07 4.35
64 65 2.080286 ACAACAGTCCATAGCGACAC 57.920 50.000 0.00 0.00 35.07 3.67
65 66 1.343142 ACAACAGTCCATAGCGACACA 59.657 47.619 0.00 0.00 35.07 3.72
66 67 2.028112 ACAACAGTCCATAGCGACACAT 60.028 45.455 0.00 0.00 35.07 3.21
67 68 2.299993 ACAGTCCATAGCGACACATG 57.700 50.000 0.00 0.00 35.07 3.21
68 69 0.933097 CAGTCCATAGCGACACATGC 59.067 55.000 0.00 0.00 35.07 4.06
69 70 0.528466 AGTCCATAGCGACACATGCG 60.528 55.000 0.00 0.00 37.44 4.73
70 71 0.527600 GTCCATAGCGACACATGCGA 60.528 55.000 0.00 0.00 37.44 5.10
71 72 0.174617 TCCATAGCGACACATGCGAA 59.825 50.000 0.00 0.00 37.44 4.70
72 73 1.006086 CCATAGCGACACATGCGAAA 58.994 50.000 0.00 0.00 37.44 3.46
73 74 1.599071 CCATAGCGACACATGCGAAAT 59.401 47.619 0.00 0.00 37.44 2.17
74 75 2.032054 CCATAGCGACACATGCGAAATT 59.968 45.455 0.00 0.00 37.44 1.82
75 76 3.247411 CCATAGCGACACATGCGAAATTA 59.753 43.478 0.00 0.00 37.44 1.40
76 77 2.806288 AGCGACACATGCGAAATTAC 57.194 45.000 0.00 0.00 37.44 1.89
77 78 2.346803 AGCGACACATGCGAAATTACT 58.653 42.857 0.00 0.00 37.44 2.24
78 79 2.742053 AGCGACACATGCGAAATTACTT 59.258 40.909 0.00 0.00 37.44 2.24
79 80 2.840176 GCGACACATGCGAAATTACTTG 59.160 45.455 0.00 0.00 0.00 3.16
80 81 3.666902 GCGACACATGCGAAATTACTTGT 60.667 43.478 0.00 0.00 0.00 3.16
81 82 4.081761 CGACACATGCGAAATTACTTGTC 58.918 43.478 0.00 0.00 0.00 3.18
82 83 4.403453 GACACATGCGAAATTACTTGTCC 58.597 43.478 0.00 0.00 0.00 4.02
83 84 3.818210 ACACATGCGAAATTACTTGTCCA 59.182 39.130 0.00 0.00 0.00 4.02
84 85 4.277174 ACACATGCGAAATTACTTGTCCAA 59.723 37.500 0.00 0.00 0.00 3.53
85 86 5.218885 CACATGCGAAATTACTTGTCCAAA 58.781 37.500 0.00 0.00 0.00 3.28
86 87 5.689514 CACATGCGAAATTACTTGTCCAAAA 59.310 36.000 0.00 0.00 0.00 2.44
87 88 6.199908 CACATGCGAAATTACTTGTCCAAAAA 59.800 34.615 0.00 0.00 0.00 1.94
106 107 5.669164 AAAAACTAGAAGGGCAACAACAA 57.331 34.783 0.00 0.00 39.74 2.83
107 108 4.649088 AAACTAGAAGGGCAACAACAAC 57.351 40.909 0.00 0.00 39.74 3.32
108 109 3.577805 ACTAGAAGGGCAACAACAACT 57.422 42.857 0.00 0.00 39.74 3.16
109 110 3.214328 ACTAGAAGGGCAACAACAACTG 58.786 45.455 0.00 0.00 39.74 3.16
110 111 0.746659 AGAAGGGCAACAACAACTGC 59.253 50.000 0.00 0.00 37.86 4.40
116 117 2.352503 GCAACAACAACTGCCATAGG 57.647 50.000 0.00 0.00 32.18 2.57
117 118 1.885887 GCAACAACAACTGCCATAGGA 59.114 47.619 0.00 0.00 32.18 2.94
118 119 2.351738 GCAACAACAACTGCCATAGGAC 60.352 50.000 0.00 0.00 32.18 3.85
119 120 1.808411 ACAACAACTGCCATAGGACG 58.192 50.000 0.00 0.00 0.00 4.79
120 121 1.346395 ACAACAACTGCCATAGGACGA 59.654 47.619 0.00 0.00 0.00 4.20
121 122 1.732259 CAACAACTGCCATAGGACGAC 59.268 52.381 0.00 0.00 0.00 4.34
122 123 0.973632 ACAACTGCCATAGGACGACA 59.026 50.000 0.00 0.00 0.00 4.35
123 124 1.346395 ACAACTGCCATAGGACGACAA 59.654 47.619 0.00 0.00 0.00 3.18
124 125 2.027192 ACAACTGCCATAGGACGACAAT 60.027 45.455 0.00 0.00 0.00 2.71
125 126 3.196901 ACAACTGCCATAGGACGACAATA 59.803 43.478 0.00 0.00 0.00 1.90
126 127 3.735237 ACTGCCATAGGACGACAATAG 57.265 47.619 0.00 0.00 0.00 1.73
127 128 3.031736 ACTGCCATAGGACGACAATAGT 58.968 45.455 0.00 0.00 0.00 2.12
128 129 4.212716 ACTGCCATAGGACGACAATAGTA 58.787 43.478 0.00 0.00 0.00 1.82
129 130 4.037684 ACTGCCATAGGACGACAATAGTAC 59.962 45.833 0.00 0.00 0.00 2.73
130 131 3.955551 TGCCATAGGACGACAATAGTACA 59.044 43.478 0.00 0.00 0.00 2.90
131 132 4.403113 TGCCATAGGACGACAATAGTACAA 59.597 41.667 0.00 0.00 0.00 2.41
132 133 4.743644 GCCATAGGACGACAATAGTACAAC 59.256 45.833 0.00 0.00 0.00 3.32
133 134 5.680408 GCCATAGGACGACAATAGTACAACA 60.680 44.000 0.00 0.00 0.00 3.33
134 135 6.513180 CCATAGGACGACAATAGTACAACAT 58.487 40.000 0.00 0.00 0.00 2.71
135 136 7.654568 CCATAGGACGACAATAGTACAACATA 58.345 38.462 0.00 0.00 0.00 2.29
136 137 8.304596 CCATAGGACGACAATAGTACAACATAT 58.695 37.037 0.00 0.00 0.00 1.78
137 138 9.343103 CATAGGACGACAATAGTACAACATATC 57.657 37.037 0.00 0.00 0.00 1.63
138 139 7.342769 AGGACGACAATAGTACAACATATCA 57.657 36.000 0.00 0.00 0.00 2.15
139 140 7.426410 AGGACGACAATAGTACAACATATCAG 58.574 38.462 0.00 0.00 0.00 2.90
140 141 7.068348 AGGACGACAATAGTACAACATATCAGT 59.932 37.037 0.00 0.00 0.00 3.41
141 142 7.705325 GGACGACAATAGTACAACATATCAGTT 59.295 37.037 0.00 0.00 0.00 3.16
142 143 8.997621 ACGACAATAGTACAACATATCAGTTT 57.002 30.769 0.00 0.00 0.00 2.66
157 158 9.331282 ACATATCAGTTTAAAGATGAACTAGCC 57.669 33.333 7.03 0.00 33.96 3.93
158 159 9.330063 CATATCAGTTTAAAGATGAACTAGCCA 57.670 33.333 7.03 0.00 33.96 4.75
159 160 9.905713 ATATCAGTTTAAAGATGAACTAGCCAA 57.094 29.630 7.03 0.00 33.96 4.52
160 161 7.435068 TCAGTTTAAAGATGAACTAGCCAAC 57.565 36.000 1.45 0.00 33.96 3.77
161 162 6.995686 TCAGTTTAAAGATGAACTAGCCAACA 59.004 34.615 1.45 0.00 33.96 3.33
162 163 7.500892 TCAGTTTAAAGATGAACTAGCCAACAA 59.499 33.333 1.45 0.00 33.96 2.83
163 164 7.805071 CAGTTTAAAGATGAACTAGCCAACAAG 59.195 37.037 0.00 0.00 33.96 3.16
164 165 6.817765 TTAAAGATGAACTAGCCAACAAGG 57.182 37.500 0.00 0.00 41.84 3.61
185 186 3.516615 GCAACAAGCCAACAAGTAAACA 58.483 40.909 0.00 0.00 37.23 2.83
186 187 3.929610 GCAACAAGCCAACAAGTAAACAA 59.070 39.130 0.00 0.00 37.23 2.83
187 188 4.570369 GCAACAAGCCAACAAGTAAACAAT 59.430 37.500 0.00 0.00 37.23 2.71
188 189 5.751028 GCAACAAGCCAACAAGTAAACAATA 59.249 36.000 0.00 0.00 37.23 1.90
189 190 6.292114 GCAACAAGCCAACAAGTAAACAATAC 60.292 38.462 0.00 0.00 37.23 1.89
190 191 6.458232 ACAAGCCAACAAGTAAACAATACA 57.542 33.333 0.00 0.00 0.00 2.29
191 192 6.868622 ACAAGCCAACAAGTAAACAATACAA 58.131 32.000 0.00 0.00 0.00 2.41
192 193 7.496747 ACAAGCCAACAAGTAAACAATACAAT 58.503 30.769 0.00 0.00 0.00 2.71
193 194 8.634444 ACAAGCCAACAAGTAAACAATACAATA 58.366 29.630 0.00 0.00 0.00 1.90
194 195 8.911662 CAAGCCAACAAGTAAACAATACAATAC 58.088 33.333 0.00 0.00 0.00 1.89
195 196 8.172352 AGCCAACAAGTAAACAATACAATACA 57.828 30.769 0.00 0.00 0.00 2.29
196 197 8.634444 AGCCAACAAGTAAACAATACAATACAA 58.366 29.630 0.00 0.00 0.00 2.41
197 198 8.696175 GCCAACAAGTAAACAATACAATACAAC 58.304 33.333 0.00 0.00 0.00 3.32
198 199 8.897809 CCAACAAGTAAACAATACAATACAACG 58.102 33.333 0.00 0.00 0.00 4.10
199 200 9.653067 CAACAAGTAAACAATACAATACAACGA 57.347 29.630 0.00 0.00 0.00 3.85
200 201 9.654417 AACAAGTAAACAATACAATACAACGAC 57.346 29.630 0.00 0.00 0.00 4.34
201 202 8.828644 ACAAGTAAACAATACAATACAACGACA 58.171 29.630 0.00 0.00 0.00 4.35
202 203 9.653067 CAAGTAAACAATACAATACAACGACAA 57.347 29.630 0.00 0.00 0.00 3.18
203 204 9.654417 AAGTAAACAATACAATACAACGACAAC 57.346 29.630 0.00 0.00 0.00 3.32
204 205 9.048446 AGTAAACAATACAATACAACGACAACT 57.952 29.630 0.00 0.00 0.00 3.16
205 206 9.654417 GTAAACAATACAATACAACGACAACTT 57.346 29.630 0.00 0.00 0.00 2.66
206 207 8.555166 AAACAATACAATACAACGACAACTTG 57.445 30.769 0.00 0.00 0.00 3.16
207 208 6.664515 ACAATACAATACAACGACAACTTGG 58.335 36.000 0.00 0.00 0.00 3.61
208 209 6.483974 ACAATACAATACAACGACAACTTGGA 59.516 34.615 0.00 0.00 0.00 3.53
209 210 7.012515 ACAATACAATACAACGACAACTTGGAA 59.987 33.333 0.00 0.00 0.00 3.53
210 211 5.821516 ACAATACAACGACAACTTGGAAA 57.178 34.783 0.00 0.00 0.00 3.13
211 212 6.385649 ACAATACAACGACAACTTGGAAAT 57.614 33.333 0.00 0.00 0.00 2.17
212 213 6.801575 ACAATACAACGACAACTTGGAAATT 58.198 32.000 0.00 0.00 0.00 1.82
213 214 7.932335 ACAATACAACGACAACTTGGAAATTA 58.068 30.769 0.00 0.00 0.00 1.40
214 215 8.573035 ACAATACAACGACAACTTGGAAATTAT 58.427 29.630 0.00 0.00 0.00 1.28
215 216 9.405587 CAATACAACGACAACTTGGAAATTATT 57.594 29.630 0.00 0.00 0.00 1.40
216 217 9.620660 AATACAACGACAACTTGGAAATTATTC 57.379 29.630 0.00 0.00 34.66 1.75
217 218 7.033530 ACAACGACAACTTGGAAATTATTCA 57.966 32.000 0.00 0.00 37.29 2.57
218 219 7.138736 ACAACGACAACTTGGAAATTATTCAG 58.861 34.615 0.00 0.00 37.29 3.02
219 220 7.012894 ACAACGACAACTTGGAAATTATTCAGA 59.987 33.333 0.00 0.00 37.29 3.27
220 221 7.504924 ACGACAACTTGGAAATTATTCAGAA 57.495 32.000 0.00 0.00 37.29 3.02
221 222 8.110860 ACGACAACTTGGAAATTATTCAGAAT 57.889 30.769 0.20 0.20 37.29 2.40
222 223 8.237267 ACGACAACTTGGAAATTATTCAGAATC 58.763 33.333 0.00 0.00 37.29 2.52
223 224 8.236586 CGACAACTTGGAAATTATTCAGAATCA 58.763 33.333 0.00 0.00 37.29 2.57
224 225 9.346725 GACAACTTGGAAATTATTCAGAATCAC 57.653 33.333 0.00 0.00 37.29 3.06
225 226 9.082313 ACAACTTGGAAATTATTCAGAATCACT 57.918 29.630 0.00 0.00 37.29 3.41
226 227 9.565213 CAACTTGGAAATTATTCAGAATCACTC 57.435 33.333 0.00 0.00 37.29 3.51
227 228 9.525826 AACTTGGAAATTATTCAGAATCACTCT 57.474 29.630 0.00 0.00 37.29 3.24
228 229 9.171877 ACTTGGAAATTATTCAGAATCACTCTC 57.828 33.333 0.00 0.00 37.29 3.20
229 230 9.170734 CTTGGAAATTATTCAGAATCACTCTCA 57.829 33.333 0.00 0.00 37.29 3.27
230 231 9.690913 TTGGAAATTATTCAGAATCACTCTCAT 57.309 29.630 0.00 0.00 37.29 2.90
231 232 9.690913 TGGAAATTATTCAGAATCACTCTCATT 57.309 29.630 0.00 0.00 37.29 2.57
237 238 9.895138 TTATTCAGAATCACTCTCATTTGATGA 57.105 29.630 0.00 0.00 37.76 2.92
238 239 8.803397 ATTCAGAATCACTCTCATTTGATGAA 57.197 30.769 0.00 0.00 39.11 2.57
239 240 7.606858 TCAGAATCACTCTCATTTGATGAAC 57.393 36.000 0.00 0.00 39.11 3.18
240 241 6.596888 TCAGAATCACTCTCATTTGATGAACC 59.403 38.462 0.00 0.00 39.11 3.62
241 242 6.373495 CAGAATCACTCTCATTTGATGAACCA 59.627 38.462 0.00 0.00 39.11 3.67
242 243 6.598457 AGAATCACTCTCATTTGATGAACCAG 59.402 38.462 0.00 0.00 39.11 4.00
243 244 5.488262 TCACTCTCATTTGATGAACCAGA 57.512 39.130 0.00 0.00 39.11 3.86
244 245 6.058553 TCACTCTCATTTGATGAACCAGAT 57.941 37.500 0.00 0.00 39.11 2.90
245 246 5.878669 TCACTCTCATTTGATGAACCAGATG 59.121 40.000 0.00 0.00 39.11 2.90
246 247 5.066117 CACTCTCATTTGATGAACCAGATGG 59.934 44.000 0.00 0.00 39.11 3.51
258 259 1.771565 CCAGATGGTGAATGCATGGT 58.228 50.000 0.00 0.00 0.00 3.55
259 260 2.934887 CCAGATGGTGAATGCATGGTA 58.065 47.619 0.00 0.00 0.00 3.25
260 261 3.493334 CCAGATGGTGAATGCATGGTAT 58.507 45.455 0.00 0.00 0.00 2.73
261 262 3.504906 CCAGATGGTGAATGCATGGTATC 59.495 47.826 0.00 0.93 0.00 2.24
262 263 4.139038 CAGATGGTGAATGCATGGTATCA 58.861 43.478 0.00 0.00 0.00 2.15
263 264 4.765339 CAGATGGTGAATGCATGGTATCAT 59.235 41.667 0.00 1.48 0.00 2.45
264 265 5.008331 AGATGGTGAATGCATGGTATCATC 58.992 41.667 17.24 17.24 0.00 2.92
265 266 4.442401 TGGTGAATGCATGGTATCATCT 57.558 40.909 0.00 0.00 0.00 2.90
266 267 4.795469 TGGTGAATGCATGGTATCATCTT 58.205 39.130 0.00 0.00 0.00 2.40
267 268 4.823442 TGGTGAATGCATGGTATCATCTTC 59.177 41.667 0.00 0.00 0.00 2.87
268 269 4.217118 GGTGAATGCATGGTATCATCTTCC 59.783 45.833 0.00 0.00 0.00 3.46
269 270 4.067192 TGAATGCATGGTATCATCTTCCG 58.933 43.478 0.00 0.00 0.00 4.30
270 271 4.202346 TGAATGCATGGTATCATCTTCCGA 60.202 41.667 0.00 0.00 0.00 4.55
271 272 4.564782 ATGCATGGTATCATCTTCCGAT 57.435 40.909 0.00 0.00 0.00 4.18
272 273 4.356405 TGCATGGTATCATCTTCCGATT 57.644 40.909 0.00 0.00 0.00 3.34
273 274 4.318332 TGCATGGTATCATCTTCCGATTC 58.682 43.478 0.00 0.00 0.00 2.52
274 275 4.202346 TGCATGGTATCATCTTCCGATTCA 60.202 41.667 0.00 0.00 0.00 2.57
275 276 4.391216 GCATGGTATCATCTTCCGATTCAG 59.609 45.833 0.00 0.00 0.00 3.02
276 277 5.787380 CATGGTATCATCTTCCGATTCAGA 58.213 41.667 0.00 0.00 0.00 3.27
277 278 5.869649 TGGTATCATCTTCCGATTCAGAA 57.130 39.130 0.00 0.00 0.00 3.02
278 279 5.847304 TGGTATCATCTTCCGATTCAGAAG 58.153 41.667 3.62 3.62 41.76 2.85
285 286 5.730296 TCTTCCGATTCAGAAGAAGAACT 57.270 39.130 9.42 0.00 45.11 3.01
286 287 6.835819 TCTTCCGATTCAGAAGAAGAACTA 57.164 37.500 9.42 0.00 45.11 2.24
287 288 6.857956 TCTTCCGATTCAGAAGAAGAACTAG 58.142 40.000 9.42 0.00 45.11 2.57
288 289 5.000012 TCCGATTCAGAAGAAGAACTAGC 58.000 43.478 0.00 0.00 37.14 3.42
289 290 4.707448 TCCGATTCAGAAGAAGAACTAGCT 59.293 41.667 0.00 0.00 37.14 3.32
290 291 4.803088 CCGATTCAGAAGAAGAACTAGCTG 59.197 45.833 0.00 0.00 37.14 4.24
291 292 5.393569 CCGATTCAGAAGAAGAACTAGCTGA 60.394 44.000 0.00 0.00 37.93 4.26
292 293 5.514914 CGATTCAGAAGAAGAACTAGCTGAC 59.485 44.000 0.00 0.00 38.74 3.51
293 294 6.603940 ATTCAGAAGAAGAACTAGCTGACT 57.396 37.500 0.00 0.00 38.74 3.41
294 295 5.637006 TCAGAAGAAGAACTAGCTGACTC 57.363 43.478 0.00 0.00 36.19 3.36
295 296 4.461081 TCAGAAGAAGAACTAGCTGACTCC 59.539 45.833 0.00 0.00 36.19 3.85
296 297 4.219507 CAGAAGAAGAACTAGCTGACTCCA 59.780 45.833 0.00 0.00 34.94 3.86
297 298 4.835615 AGAAGAAGAACTAGCTGACTCCAA 59.164 41.667 0.00 0.00 0.00 3.53
298 299 4.529109 AGAAGAACTAGCTGACTCCAAC 57.471 45.455 0.00 0.00 0.00 3.77
299 300 4.156477 AGAAGAACTAGCTGACTCCAACT 58.844 43.478 0.00 0.00 0.00 3.16
300 301 4.219725 AGAAGAACTAGCTGACTCCAACTC 59.780 45.833 0.00 0.00 0.00 3.01
301 302 3.501349 AGAACTAGCTGACTCCAACTCA 58.499 45.455 0.00 0.00 0.00 3.41
302 303 4.093011 AGAACTAGCTGACTCCAACTCAT 58.907 43.478 0.00 0.00 0.00 2.90
303 304 4.159506 AGAACTAGCTGACTCCAACTCATC 59.840 45.833 0.00 0.00 0.00 2.92
304 305 3.707316 ACTAGCTGACTCCAACTCATCT 58.293 45.455 0.00 0.00 0.00 2.90
305 306 4.093011 ACTAGCTGACTCCAACTCATCTT 58.907 43.478 0.00 0.00 0.00 2.40
306 307 3.608316 AGCTGACTCCAACTCATCTTC 57.392 47.619 0.00 0.00 0.00 2.87
307 308 2.902486 AGCTGACTCCAACTCATCTTCA 59.098 45.455 0.00 0.00 0.00 3.02
308 309 2.999355 GCTGACTCCAACTCATCTTCAC 59.001 50.000 0.00 0.00 0.00 3.18
309 310 3.249091 CTGACTCCAACTCATCTTCACG 58.751 50.000 0.00 0.00 0.00 4.35
310 311 2.890945 TGACTCCAACTCATCTTCACGA 59.109 45.455 0.00 0.00 0.00 4.35
311 312 3.320826 TGACTCCAACTCATCTTCACGAA 59.679 43.478 0.00 0.00 0.00 3.85
312 313 4.202212 TGACTCCAACTCATCTTCACGAAA 60.202 41.667 0.00 0.00 0.00 3.46
313 314 4.703897 ACTCCAACTCATCTTCACGAAAA 58.296 39.130 0.00 0.00 0.00 2.29
314 315 5.123227 ACTCCAACTCATCTTCACGAAAAA 58.877 37.500 0.00 0.00 0.00 1.94
315 316 5.007724 ACTCCAACTCATCTTCACGAAAAAC 59.992 40.000 0.00 0.00 0.00 2.43
316 317 4.878971 TCCAACTCATCTTCACGAAAAACA 59.121 37.500 0.00 0.00 0.00 2.83
317 318 5.007626 TCCAACTCATCTTCACGAAAAACAG 59.992 40.000 0.00 0.00 0.00 3.16
318 319 5.207768 CAACTCATCTTCACGAAAAACAGG 58.792 41.667 0.00 0.00 0.00 4.00
319 320 3.815401 ACTCATCTTCACGAAAAACAGGG 59.185 43.478 0.00 0.00 0.00 4.45
320 321 4.065088 CTCATCTTCACGAAAAACAGGGA 58.935 43.478 0.00 0.00 0.00 4.20
321 322 4.065088 TCATCTTCACGAAAAACAGGGAG 58.935 43.478 0.00 0.00 0.00 4.30
322 323 2.218603 TCTTCACGAAAAACAGGGAGC 58.781 47.619 0.00 0.00 0.00 4.70
323 324 1.946768 CTTCACGAAAAACAGGGAGCA 59.053 47.619 0.00 0.00 0.00 4.26
324 325 1.593196 TCACGAAAAACAGGGAGCAG 58.407 50.000 0.00 0.00 0.00 4.24
325 326 1.134220 TCACGAAAAACAGGGAGCAGT 60.134 47.619 0.00 0.00 0.00 4.40
326 327 1.676006 CACGAAAAACAGGGAGCAGTT 59.324 47.619 0.00 0.00 0.00 3.16
327 328 2.099098 CACGAAAAACAGGGAGCAGTTT 59.901 45.455 0.00 0.00 39.46 2.66
328 329 2.758423 ACGAAAAACAGGGAGCAGTTTT 59.242 40.909 0.00 0.00 46.53 2.43
345 346 1.519408 TTTTTCTTCTTCCGAGGGCG 58.481 50.000 0.00 0.00 37.24 6.13
346 347 0.682852 TTTTCTTCTTCCGAGGGCGA 59.317 50.000 0.00 0.00 40.82 5.54
347 348 0.246635 TTTCTTCTTCCGAGGGCGAG 59.753 55.000 0.00 0.00 40.82 5.03
348 349 0.611062 TTCTTCTTCCGAGGGCGAGA 60.611 55.000 0.00 0.00 40.82 4.04
349 350 0.395862 TCTTCTTCCGAGGGCGAGAT 60.396 55.000 0.00 0.00 40.82 2.75
350 351 0.461961 CTTCTTCCGAGGGCGAGATT 59.538 55.000 0.00 0.00 40.82 2.40
351 352 0.175760 TTCTTCCGAGGGCGAGATTG 59.824 55.000 0.00 0.00 40.82 2.67
352 353 1.227380 CTTCCGAGGGCGAGATTGG 60.227 63.158 0.00 0.00 40.82 3.16
353 354 2.650813 CTTCCGAGGGCGAGATTGGG 62.651 65.000 0.00 0.00 40.82 4.12
354 355 3.154473 CCGAGGGCGAGATTGGGA 61.154 66.667 0.00 0.00 40.82 4.37
355 356 2.107141 CGAGGGCGAGATTGGGAC 59.893 66.667 0.00 0.00 40.82 4.46
356 357 2.107141 GAGGGCGAGATTGGGACG 59.893 66.667 0.00 0.00 0.00 4.79
361 362 4.719997 CGAGATTGGGACGCTCTC 57.280 61.111 0.00 0.19 35.85 3.20
362 363 2.111162 CGAGATTGGGACGCTCTCT 58.889 57.895 7.05 1.90 36.67 3.10
363 364 0.457851 CGAGATTGGGACGCTCTCTT 59.542 55.000 7.05 0.00 36.67 2.85
364 365 1.134965 CGAGATTGGGACGCTCTCTTT 60.135 52.381 7.05 0.00 36.67 2.52
365 366 2.545731 GAGATTGGGACGCTCTCTTTC 58.454 52.381 2.56 0.00 36.15 2.62
366 367 2.167487 GAGATTGGGACGCTCTCTTTCT 59.833 50.000 2.56 0.00 36.15 2.52
367 368 2.569404 AGATTGGGACGCTCTCTTTCTT 59.431 45.455 0.00 0.00 0.00 2.52
368 369 2.930826 TTGGGACGCTCTCTTTCTTT 57.069 45.000 0.00 0.00 0.00 2.52
369 370 2.930826 TGGGACGCTCTCTTTCTTTT 57.069 45.000 0.00 0.00 0.00 2.27
370 371 3.208747 TGGGACGCTCTCTTTCTTTTT 57.791 42.857 0.00 0.00 0.00 1.94
371 372 2.878406 TGGGACGCTCTCTTTCTTTTTG 59.122 45.455 0.00 0.00 0.00 2.44
372 373 3.139077 GGGACGCTCTCTTTCTTTTTGA 58.861 45.455 0.00 0.00 0.00 2.69
373 374 3.753797 GGGACGCTCTCTTTCTTTTTGAT 59.246 43.478 0.00 0.00 0.00 2.57
374 375 4.378874 GGGACGCTCTCTTTCTTTTTGATG 60.379 45.833 0.00 0.00 0.00 3.07
375 376 4.152607 ACGCTCTCTTTCTTTTTGATGC 57.847 40.909 0.00 0.00 0.00 3.91
376 377 3.565482 ACGCTCTCTTTCTTTTTGATGCA 59.435 39.130 0.00 0.00 0.00 3.96
377 378 3.910767 CGCTCTCTTTCTTTTTGATGCAC 59.089 43.478 0.00 0.00 0.00 4.57
378 379 4.233005 GCTCTCTTTCTTTTTGATGCACC 58.767 43.478 0.00 0.00 0.00 5.01
379 380 4.261741 GCTCTCTTTCTTTTTGATGCACCA 60.262 41.667 0.00 0.00 0.00 4.17
380 381 5.737063 GCTCTCTTTCTTTTTGATGCACCAA 60.737 40.000 0.00 0.00 0.00 3.67
381 382 5.591099 TCTCTTTCTTTTTGATGCACCAAC 58.409 37.500 0.00 0.00 0.00 3.77
382 383 5.360714 TCTCTTTCTTTTTGATGCACCAACT 59.639 36.000 0.00 0.00 0.00 3.16
383 384 5.350633 TCTTTCTTTTTGATGCACCAACTG 58.649 37.500 0.00 0.00 0.00 3.16
391 392 4.164258 GCACCAACTGCTCCTTGT 57.836 55.556 0.00 0.00 43.33 3.16
392 393 1.656441 GCACCAACTGCTCCTTGTG 59.344 57.895 0.00 0.00 43.33 3.33
393 394 0.819259 GCACCAACTGCTCCTTGTGA 60.819 55.000 0.00 0.00 43.33 3.58
394 395 1.901591 CACCAACTGCTCCTTGTGAT 58.098 50.000 0.00 0.00 0.00 3.06
395 396 1.538512 CACCAACTGCTCCTTGTGATG 59.461 52.381 0.00 0.00 0.00 3.07
396 397 1.143684 ACCAACTGCTCCTTGTGATGT 59.856 47.619 0.00 0.00 0.00 3.06
397 398 2.233271 CCAACTGCTCCTTGTGATGTT 58.767 47.619 0.00 0.00 0.00 2.71
398 399 2.030540 CCAACTGCTCCTTGTGATGTTG 60.031 50.000 0.00 0.00 34.79 3.33
399 400 2.880268 CAACTGCTCCTTGTGATGTTGA 59.120 45.455 0.00 0.00 36.43 3.18
400 401 3.430042 ACTGCTCCTTGTGATGTTGAT 57.570 42.857 0.00 0.00 0.00 2.57
401 402 3.079578 ACTGCTCCTTGTGATGTTGATG 58.920 45.455 0.00 0.00 0.00 3.07
402 403 1.814394 TGCTCCTTGTGATGTTGATGC 59.186 47.619 0.00 0.00 0.00 3.91
403 404 2.089980 GCTCCTTGTGATGTTGATGCT 58.910 47.619 0.00 0.00 0.00 3.79
404 405 2.159421 GCTCCTTGTGATGTTGATGCTG 60.159 50.000 0.00 0.00 0.00 4.41
405 406 1.814394 TCCTTGTGATGTTGATGCTGC 59.186 47.619 0.00 0.00 0.00 5.25
406 407 1.542472 CCTTGTGATGTTGATGCTGCA 59.458 47.619 4.13 4.13 0.00 4.41
407 408 2.029739 CCTTGTGATGTTGATGCTGCAA 60.030 45.455 6.36 0.00 0.00 4.08
408 409 2.710220 TGTGATGTTGATGCTGCAAC 57.290 45.000 6.36 4.29 46.33 4.17
409 410 2.232399 TGTGATGTTGATGCTGCAACT 58.768 42.857 6.36 0.00 46.31 3.16
410 411 2.624364 TGTGATGTTGATGCTGCAACTT 59.376 40.909 6.36 13.95 46.31 2.66
411 412 3.240069 GTGATGTTGATGCTGCAACTTC 58.760 45.455 20.63 20.63 46.31 3.01
412 413 3.057736 GTGATGTTGATGCTGCAACTTCT 60.058 43.478 24.20 12.18 45.59 2.85
413 414 4.154737 GTGATGTTGATGCTGCAACTTCTA 59.845 41.667 24.20 15.28 45.59 2.10
414 415 4.154737 TGATGTTGATGCTGCAACTTCTAC 59.845 41.667 24.20 7.84 45.59 2.59
415 416 3.475575 TGTTGATGCTGCAACTTCTACA 58.524 40.909 6.36 10.44 46.31 2.74
416 417 3.882288 TGTTGATGCTGCAACTTCTACAA 59.118 39.130 14.60 2.61 46.31 2.41
417 418 4.222114 GTTGATGCTGCAACTTCTACAAC 58.778 43.478 6.36 10.55 43.60 3.32
418 419 3.743521 TGATGCTGCAACTTCTACAACT 58.256 40.909 6.36 0.00 0.00 3.16
419 420 4.136796 TGATGCTGCAACTTCTACAACTT 58.863 39.130 6.36 0.00 0.00 2.66
420 421 4.214119 TGATGCTGCAACTTCTACAACTTC 59.786 41.667 6.36 0.00 0.00 3.01
421 422 3.540617 TGCTGCAACTTCTACAACTTCA 58.459 40.909 0.00 0.00 0.00 3.02
1562 2245 1.843368 ATTGTGCCTCATGAACCTGG 58.157 50.000 0.00 0.00 0.00 4.45
2192 3592 3.608073 GCACGCTATTCAAAACATTGGTC 59.392 43.478 0.00 0.00 0.00 4.02
2193 3593 4.793071 CACGCTATTCAAAACATTGGTCA 58.207 39.130 0.00 0.00 0.00 4.02
2194 3594 5.401550 CACGCTATTCAAAACATTGGTCAT 58.598 37.500 0.00 0.00 0.00 3.06
2195 3595 6.550843 CACGCTATTCAAAACATTGGTCATA 58.449 36.000 0.00 0.00 0.00 2.15
2196 3596 7.195646 CACGCTATTCAAAACATTGGTCATAT 58.804 34.615 0.00 0.00 0.00 1.78
2197 3597 7.166307 CACGCTATTCAAAACATTGGTCATATG 59.834 37.037 0.00 0.00 0.00 1.78
2198 3598 6.142798 CGCTATTCAAAACATTGGTCATATGC 59.857 38.462 0.00 0.00 0.00 3.14
2199 3599 6.421801 GCTATTCAAAACATTGGTCATATGCC 59.578 38.462 0.00 3.57 0.00 4.40
2200 3600 5.999205 TTCAAAACATTGGTCATATGCCT 57.001 34.783 14.63 0.00 0.00 4.75
2201 3601 7.658525 ATTCAAAACATTGGTCATATGCCTA 57.341 32.000 14.63 9.32 0.00 3.93
2202 3602 6.698008 TCAAAACATTGGTCATATGCCTAG 57.302 37.500 14.63 8.61 0.00 3.02
2203 3603 6.422333 TCAAAACATTGGTCATATGCCTAGA 58.578 36.000 14.63 4.68 0.00 2.43
2204 3604 6.543465 TCAAAACATTGGTCATATGCCTAGAG 59.457 38.462 14.63 8.51 0.00 2.43
2205 3605 5.636903 AACATTGGTCATATGCCTAGAGT 57.363 39.130 14.63 8.96 0.00 3.24
2206 3606 4.965814 ACATTGGTCATATGCCTAGAGTG 58.034 43.478 14.63 7.50 0.00 3.51
2207 3607 4.655649 ACATTGGTCATATGCCTAGAGTGA 59.344 41.667 14.63 0.00 0.00 3.41
2208 3608 5.309020 ACATTGGTCATATGCCTAGAGTGAT 59.691 40.000 14.63 0.00 0.00 3.06
2209 3609 5.894298 TTGGTCATATGCCTAGAGTGATT 57.106 39.130 14.63 0.00 0.00 2.57
2210 3610 5.474578 TGGTCATATGCCTAGAGTGATTC 57.525 43.478 14.63 0.00 0.00 2.52
2211 3611 5.150715 TGGTCATATGCCTAGAGTGATTCT 58.849 41.667 14.63 0.00 40.06 2.40
2212 3612 6.314917 TGGTCATATGCCTAGAGTGATTCTA 58.685 40.000 14.63 0.00 37.36 2.10
2223 3623 5.725551 AGAGTGATTCTAGGAGAGGAAGA 57.274 43.478 0.00 0.00 33.23 2.87
2224 3624 5.445964 AGAGTGATTCTAGGAGAGGAAGAC 58.554 45.833 0.00 0.00 33.23 3.01
2225 3625 4.542697 AGTGATTCTAGGAGAGGAAGACC 58.457 47.826 0.00 0.00 0.00 3.85
2226 3626 4.017037 AGTGATTCTAGGAGAGGAAGACCA 60.017 45.833 0.00 0.00 38.94 4.02
2227 3627 4.340950 GTGATTCTAGGAGAGGAAGACCAG 59.659 50.000 0.00 0.00 38.94 4.00
2228 3628 3.390175 TTCTAGGAGAGGAAGACCAGG 57.610 52.381 0.00 0.00 38.94 4.45
2229 3629 2.289467 TCTAGGAGAGGAAGACCAGGT 58.711 52.381 0.00 0.00 38.94 4.00
2230 3630 2.655407 TCTAGGAGAGGAAGACCAGGTT 59.345 50.000 0.00 0.00 38.94 3.50
2231 3631 3.856813 TCTAGGAGAGGAAGACCAGGTTA 59.143 47.826 0.00 0.00 38.94 2.85
2232 3632 3.108847 AGGAGAGGAAGACCAGGTTAG 57.891 52.381 0.00 0.00 38.94 2.34
2233 3633 1.483004 GGAGAGGAAGACCAGGTTAGC 59.517 57.143 0.00 0.00 38.94 3.09
2234 3634 1.483004 GAGAGGAAGACCAGGTTAGCC 59.517 57.143 0.00 0.00 38.94 3.93
2235 3635 0.175989 GAGGAAGACCAGGTTAGCCG 59.824 60.000 0.00 0.00 40.50 5.52
2236 3636 0.544595 AGGAAGACCAGGTTAGCCGT 60.545 55.000 0.00 0.00 40.50 5.68
2237 3637 0.323957 GGAAGACCAGGTTAGCCGTT 59.676 55.000 0.00 0.00 40.50 4.44
2238 3638 1.551883 GGAAGACCAGGTTAGCCGTTA 59.448 52.381 0.00 0.00 40.50 3.18
2239 3639 2.418334 GGAAGACCAGGTTAGCCGTTAG 60.418 54.545 0.00 0.00 40.50 2.34
2240 3640 1.934410 AGACCAGGTTAGCCGTTAGT 58.066 50.000 0.00 0.00 40.50 2.24
2241 3641 3.091633 AGACCAGGTTAGCCGTTAGTA 57.908 47.619 0.00 0.00 40.50 1.82
2242 3642 3.022406 AGACCAGGTTAGCCGTTAGTAG 58.978 50.000 0.00 0.00 40.50 2.57
2243 3643 1.479730 ACCAGGTTAGCCGTTAGTAGC 59.520 52.381 0.00 0.00 40.50 3.58
2244 3644 1.479323 CCAGGTTAGCCGTTAGTAGCA 59.521 52.381 0.00 0.00 40.50 3.49
2245 3645 2.093869 CCAGGTTAGCCGTTAGTAGCAA 60.094 50.000 0.00 0.00 40.50 3.91
2246 3646 3.187700 CAGGTTAGCCGTTAGTAGCAAG 58.812 50.000 0.00 0.00 40.50 4.01
2247 3647 2.167900 AGGTTAGCCGTTAGTAGCAAGG 59.832 50.000 0.00 0.00 40.50 3.61
2248 3648 2.093816 GGTTAGCCGTTAGTAGCAAGGT 60.094 50.000 0.00 0.00 0.00 3.50
2249 3649 3.593096 GTTAGCCGTTAGTAGCAAGGTT 58.407 45.455 0.00 0.00 0.00 3.50
2250 3650 2.381725 AGCCGTTAGTAGCAAGGTTC 57.618 50.000 0.00 0.00 0.00 3.62
2251 3651 1.621814 AGCCGTTAGTAGCAAGGTTCA 59.378 47.619 0.00 0.00 0.00 3.18
2252 3652 2.236395 AGCCGTTAGTAGCAAGGTTCAT 59.764 45.455 0.00 0.00 0.00 2.57
2253 3653 2.351726 GCCGTTAGTAGCAAGGTTCATG 59.648 50.000 0.00 0.00 0.00 3.07
2254 3654 2.351726 CCGTTAGTAGCAAGGTTCATGC 59.648 50.000 0.00 0.00 44.15 4.06
2255 3655 3.000041 CGTTAGTAGCAAGGTTCATGCA 59.000 45.455 0.00 0.00 46.22 3.96
2256 3656 3.623060 CGTTAGTAGCAAGGTTCATGCAT 59.377 43.478 0.00 0.00 46.22 3.96
2257 3657 4.260375 CGTTAGTAGCAAGGTTCATGCATC 60.260 45.833 0.00 0.00 46.22 3.91
2258 3658 3.354948 AGTAGCAAGGTTCATGCATCA 57.645 42.857 0.00 0.00 46.22 3.07
2259 3659 3.276857 AGTAGCAAGGTTCATGCATCAG 58.723 45.455 0.00 0.00 46.22 2.90
2260 3660 2.211250 AGCAAGGTTCATGCATCAGT 57.789 45.000 0.00 0.00 46.22 3.41
2261 3661 2.522185 AGCAAGGTTCATGCATCAGTT 58.478 42.857 0.00 0.00 46.22 3.16
2262 3662 3.689347 AGCAAGGTTCATGCATCAGTTA 58.311 40.909 0.00 0.00 46.22 2.24
2263 3663 3.693085 AGCAAGGTTCATGCATCAGTTAG 59.307 43.478 0.00 0.00 46.22 2.34
2264 3664 3.441572 GCAAGGTTCATGCATCAGTTAGT 59.558 43.478 0.00 0.00 43.29 2.24
2265 3665 4.082571 GCAAGGTTCATGCATCAGTTAGTT 60.083 41.667 0.00 0.00 43.29 2.24
2266 3666 5.123820 GCAAGGTTCATGCATCAGTTAGTTA 59.876 40.000 0.00 0.00 43.29 2.24
2267 3667 6.676456 GCAAGGTTCATGCATCAGTTAGTTAG 60.676 42.308 0.00 0.00 43.29 2.34
2268 3668 6.054860 AGGTTCATGCATCAGTTAGTTAGT 57.945 37.500 0.00 0.00 0.00 2.24
2269 3669 5.877012 AGGTTCATGCATCAGTTAGTTAGTG 59.123 40.000 0.00 0.00 0.00 2.74
2270 3670 5.447818 GGTTCATGCATCAGTTAGTTAGTGC 60.448 44.000 0.00 0.00 0.00 4.40
2271 3671 4.831107 TCATGCATCAGTTAGTTAGTGCA 58.169 39.130 0.00 0.03 45.28 4.57
2274 3674 4.578871 TGCATCAGTTAGTTAGTGCATGT 58.421 39.130 0.00 0.00 37.63 3.21
2275 3675 4.392754 TGCATCAGTTAGTTAGTGCATGTG 59.607 41.667 0.00 0.00 37.63 3.21
2276 3676 4.728882 GCATCAGTTAGTTAGTGCATGTGC 60.729 45.833 0.00 0.00 42.50 4.57
2286 3686 3.941035 GCATGTGCAAGTGTTGGC 58.059 55.556 0.00 0.00 41.59 4.52
2291 3691 2.186826 GTGCAAGTGTTGGCCGACT 61.187 57.895 23.87 10.29 0.00 4.18
2353 3753 0.827089 CCAATCACCTTGCACCACCA 60.827 55.000 0.00 0.00 33.20 4.17
2417 3996 5.010820 GCTCATATTTACTACTCCCTCCGTT 59.989 44.000 0.00 0.00 0.00 4.44
2418 3997 6.462628 GCTCATATTTACTACTCCCTCCGTTT 60.463 42.308 0.00 0.00 0.00 3.60
2419 3998 7.047460 TCATATTTACTACTCCCTCCGTTTC 57.953 40.000 0.00 0.00 0.00 2.78
2420 3999 3.855689 TTTACTACTCCCTCCGTTTCG 57.144 47.619 0.00 0.00 0.00 3.46
2421 4000 2.787473 TACTACTCCCTCCGTTTCGA 57.213 50.000 0.00 0.00 0.00 3.71
2423 4002 2.454538 ACTACTCCCTCCGTTTCGAAT 58.545 47.619 0.00 0.00 0.00 3.34
2426 4005 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
2427 4006 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
2431 4010 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
2432 4011 4.243270 CCTCCGTTTCGAATTACTTGTCT 58.757 43.478 0.00 0.00 0.00 3.41
2434 4013 5.389516 CCTCCGTTTCGAATTACTTGTCTTG 60.390 44.000 0.00 0.00 0.00 3.02
2435 4014 4.449743 TCCGTTTCGAATTACTTGTCTTGG 59.550 41.667 0.00 0.00 0.00 3.61
2436 4015 4.449743 CCGTTTCGAATTACTTGTCTTGGA 59.550 41.667 0.00 0.00 0.00 3.53
2437 4016 5.121768 CCGTTTCGAATTACTTGTCTTGGAT 59.878 40.000 0.00 0.00 0.00 3.41
2438 4017 6.348213 CCGTTTCGAATTACTTGTCTTGGATT 60.348 38.462 0.00 0.00 0.00 3.01
2440 4019 7.059488 CGTTTCGAATTACTTGTCTTGGATTTG 59.941 37.037 0.00 0.00 0.00 2.32
2442 4021 7.129109 TCGAATTACTTGTCTTGGATTTGTC 57.871 36.000 0.00 0.00 0.00 3.18
2444 4023 8.092068 TCGAATTACTTGTCTTGGATTTGTCTA 58.908 33.333 0.00 0.00 0.00 2.59
2445 4024 8.383619 CGAATTACTTGTCTTGGATTTGTCTAG 58.616 37.037 0.00 0.00 0.00 2.43
2446 4025 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
2447 4026 9.965902 AATTACTTGTCTTGGATTTGTCTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
2449 4028 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
2451 4030 6.769134 TGTCTTGGATTTGTCTAGATACGA 57.231 37.500 0.00 0.00 0.00 3.43
2452 4031 7.165460 TGTCTTGGATTTGTCTAGATACGAA 57.835 36.000 0.00 0.00 0.00 3.85
2453 4032 7.782049 TGTCTTGGATTTGTCTAGATACGAAT 58.218 34.615 0.00 0.00 36.39 3.34
2454 4033 7.706607 TGTCTTGGATTTGTCTAGATACGAATG 59.293 37.037 0.00 0.00 34.30 2.67
2455 4034 7.707035 GTCTTGGATTTGTCTAGATACGAATGT 59.293 37.037 0.00 0.00 34.30 2.71
2457 4036 9.698309 CTTGGATTTGTCTAGATACGAATGTAT 57.302 33.333 0.00 0.00 43.97 2.29
2474 4053 9.737427 ACGAATGTATCTAGACTCATTTTAGTG 57.263 33.333 18.84 12.17 31.87 2.74
2475 4054 8.695284 CGAATGTATCTAGACTCATTTTAGTGC 58.305 37.037 18.84 9.15 31.87 4.40
2476 4055 9.757227 GAATGTATCTAGACTCATTTTAGTGCT 57.243 33.333 18.84 2.29 31.87 4.40
2479 4058 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
2486 4065 9.586732 AGACTCATTTTAGTGCTAGATATCTCT 57.413 33.333 8.95 2.64 35.39 3.10
2487 4066 9.624697 GACTCATTTTAGTGCTAGATATCTCTG 57.375 37.037 8.95 4.94 32.66 3.35
2488 4067 9.142014 ACTCATTTTAGTGCTAGATATCTCTGT 57.858 33.333 8.95 0.00 32.66 3.41
2507 4218 8.001881 TCTCTGTATCTAGACAAATCCAAGAC 57.998 38.462 0.00 0.00 0.00 3.01
2508 4219 7.615757 TCTCTGTATCTAGACAAATCCAAGACA 59.384 37.037 0.00 0.00 0.00 3.41
2509 4220 8.134202 TCTGTATCTAGACAAATCCAAGACAA 57.866 34.615 0.00 0.00 0.00 3.18
2510 4221 8.253810 TCTGTATCTAGACAAATCCAAGACAAG 58.746 37.037 0.00 0.00 0.00 3.16
2511 4222 7.907389 TGTATCTAGACAAATCCAAGACAAGT 58.093 34.615 0.00 0.00 0.00 3.16
2513 4224 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
2516 4227 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
2517 4228 9.219603 CTAGACAAATCCAAGACAAGTAATTCA 57.780 33.333 0.00 0.00 0.00 2.57
2518 4229 8.103948 AGACAAATCCAAGACAAGTAATTCAG 57.896 34.615 0.00 0.00 0.00 3.02
2519 4230 7.939039 AGACAAATCCAAGACAAGTAATTCAGA 59.061 33.333 0.00 0.00 0.00 3.27
2525 4236 5.120830 CCAAGACAAGTAATTCAGAACGGAG 59.879 44.000 0.00 0.00 0.00 4.63
2538 4349 3.684788 CAGAACGGAGGGAGTAAATGTTG 59.315 47.826 0.00 0.00 0.00 3.33
2544 4355 4.814771 CGGAGGGAGTAAATGTTGGTATTC 59.185 45.833 0.00 0.00 0.00 1.75
2545 4356 5.628200 CGGAGGGAGTAAATGTTGGTATTCA 60.628 44.000 0.00 0.00 0.00 2.57
2560 4371 1.814292 ATTCAACCACCCTGGCCCAT 61.814 55.000 0.00 0.00 42.67 4.00
2587 4398 3.878699 TGATGTCATCCACATGCATGTAC 59.121 43.478 30.92 23.99 46.53 2.90
2592 4403 2.464157 TCCACATGCATGTACGTCAA 57.536 45.000 30.92 10.78 39.39 3.18
2609 4420 3.613671 CGTCAAGAATGTGACAGCTCTCT 60.614 47.826 6.19 0.00 46.90 3.10
2626 4437 4.649218 GCTCTCTTCTCTCTTCCCTTACAT 59.351 45.833 0.00 0.00 0.00 2.29
2627 4438 5.830991 GCTCTCTTCTCTCTTCCCTTACATA 59.169 44.000 0.00 0.00 0.00 2.29
2628 4439 6.322712 GCTCTCTTCTCTCTTCCCTTACATAA 59.677 42.308 0.00 0.00 0.00 1.90
2629 4440 7.015195 GCTCTCTTCTCTCTTCCCTTACATAAT 59.985 40.741 0.00 0.00 0.00 1.28
2630 4441 9.581289 CTCTCTTCTCTCTTCCCTTACATAATA 57.419 37.037 0.00 0.00 0.00 0.98
2687 4499 9.853555 TTAACTCGTCGTATCTTTTAAACCATA 57.146 29.630 0.00 0.00 0.00 2.74
2728 4540 8.922676 ACTTTTTATATATATGAACTCGTGGCG 58.077 33.333 5.44 0.00 0.00 5.69
2729 4541 8.821147 TTTTTATATATATGAACTCGTGGCGT 57.179 30.769 5.44 0.00 0.00 5.68
2730 4542 8.821147 TTTTATATATATGAACTCGTGGCGTT 57.179 30.769 5.44 0.00 0.00 4.84
2731 4543 8.456904 TTTATATATATGAACTCGTGGCGTTC 57.543 34.615 5.44 0.00 40.79 3.95
2749 4561 5.278315 GGCGTTCAGACCTTTAAAACAAGAT 60.278 40.000 0.00 0.00 0.00 2.40
2754 4566 9.399403 GTTCAGACCTTTAAAACAAGATCAATC 57.601 33.333 0.00 0.00 0.00 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 9.599866 TGTTGTATTGTTATGTTCTCCATCTAG 57.400 33.333 0.00 0.00 34.86 2.43
25 26 9.599866 CTGTTGTATTGTTATGTTCTCCATCTA 57.400 33.333 0.00 0.00 34.86 1.98
26 27 8.103305 ACTGTTGTATTGTTATGTTCTCCATCT 58.897 33.333 0.00 0.00 34.86 2.90
27 28 8.268850 ACTGTTGTATTGTTATGTTCTCCATC 57.731 34.615 0.00 0.00 34.86 3.51
28 29 7.336931 GGACTGTTGTATTGTTATGTTCTCCAT 59.663 37.037 0.00 0.00 37.58 3.41
29 30 6.653320 GGACTGTTGTATTGTTATGTTCTCCA 59.347 38.462 0.00 0.00 0.00 3.86
30 31 6.653320 TGGACTGTTGTATTGTTATGTTCTCC 59.347 38.462 0.00 0.00 0.00 3.71
31 32 7.667043 TGGACTGTTGTATTGTTATGTTCTC 57.333 36.000 0.00 0.00 0.00 2.87
32 33 9.383519 CTATGGACTGTTGTATTGTTATGTTCT 57.616 33.333 0.00 0.00 0.00 3.01
33 34 8.122952 GCTATGGACTGTTGTATTGTTATGTTC 58.877 37.037 0.00 0.00 0.00 3.18
34 35 7.201609 CGCTATGGACTGTTGTATTGTTATGTT 60.202 37.037 0.00 0.00 0.00 2.71
35 36 6.257849 CGCTATGGACTGTTGTATTGTTATGT 59.742 38.462 0.00 0.00 0.00 2.29
36 37 6.478673 TCGCTATGGACTGTTGTATTGTTATG 59.521 38.462 0.00 0.00 0.00 1.90
37 38 6.479001 GTCGCTATGGACTGTTGTATTGTTAT 59.521 38.462 0.00 0.00 34.09 1.89
38 39 5.808540 GTCGCTATGGACTGTTGTATTGTTA 59.191 40.000 0.00 0.00 34.09 2.41
39 40 4.630069 GTCGCTATGGACTGTTGTATTGTT 59.370 41.667 0.00 0.00 34.09 2.83
40 41 4.181578 GTCGCTATGGACTGTTGTATTGT 58.818 43.478 0.00 0.00 34.09 2.71
41 42 4.032900 GTGTCGCTATGGACTGTTGTATTG 59.967 45.833 0.00 0.00 37.81 1.90
42 43 4.181578 GTGTCGCTATGGACTGTTGTATT 58.818 43.478 0.00 0.00 37.81 1.89
43 44 3.194755 TGTGTCGCTATGGACTGTTGTAT 59.805 43.478 0.00 0.00 37.81 2.29
44 45 2.559231 TGTGTCGCTATGGACTGTTGTA 59.441 45.455 0.00 0.00 37.81 2.41
45 46 1.343142 TGTGTCGCTATGGACTGTTGT 59.657 47.619 0.00 0.00 37.81 3.32
46 47 2.078849 TGTGTCGCTATGGACTGTTG 57.921 50.000 0.00 0.00 37.81 3.33
47 48 2.621338 CATGTGTCGCTATGGACTGTT 58.379 47.619 0.00 0.00 37.81 3.16
48 49 1.740380 GCATGTGTCGCTATGGACTGT 60.740 52.381 0.00 0.00 37.81 3.55
49 50 0.933097 GCATGTGTCGCTATGGACTG 59.067 55.000 0.00 0.00 37.81 3.51
50 51 0.528466 CGCATGTGTCGCTATGGACT 60.528 55.000 0.00 0.00 37.81 3.85
51 52 0.527600 TCGCATGTGTCGCTATGGAC 60.528 55.000 6.09 0.00 37.45 4.02
52 53 0.174617 TTCGCATGTGTCGCTATGGA 59.825 50.000 6.09 0.00 0.00 3.41
53 54 1.006086 TTTCGCATGTGTCGCTATGG 58.994 50.000 6.09 0.00 0.00 2.74
54 55 3.323729 AATTTCGCATGTGTCGCTATG 57.676 42.857 6.09 0.00 0.00 2.23
55 56 4.119862 AGTAATTTCGCATGTGTCGCTAT 58.880 39.130 6.09 0.00 0.00 2.97
56 57 3.517602 AGTAATTTCGCATGTGTCGCTA 58.482 40.909 6.09 0.00 0.00 4.26
57 58 2.346803 AGTAATTTCGCATGTGTCGCT 58.653 42.857 6.09 0.00 0.00 4.93
58 59 2.806288 AGTAATTTCGCATGTGTCGC 57.194 45.000 6.09 0.00 0.00 5.19
59 60 4.065423 ACAAGTAATTTCGCATGTGTCG 57.935 40.909 6.09 0.00 0.00 4.35
60 61 4.083537 TGGACAAGTAATTTCGCATGTGTC 60.084 41.667 6.09 1.89 34.71 3.67
61 62 3.818210 TGGACAAGTAATTTCGCATGTGT 59.182 39.130 6.09 0.00 0.00 3.72
62 63 4.418013 TGGACAAGTAATTTCGCATGTG 57.582 40.909 0.00 0.00 0.00 3.21
63 64 5.446143 TTTGGACAAGTAATTTCGCATGT 57.554 34.783 0.00 0.00 0.00 3.21
64 65 6.761731 TTTTTGGACAAGTAATTTCGCATG 57.238 33.333 0.00 0.00 0.00 4.06
84 85 5.186992 AGTTGTTGTTGCCCTTCTAGTTTTT 59.813 36.000 0.00 0.00 0.00 1.94
85 86 4.709886 AGTTGTTGTTGCCCTTCTAGTTTT 59.290 37.500 0.00 0.00 0.00 2.43
86 87 4.097892 CAGTTGTTGTTGCCCTTCTAGTTT 59.902 41.667 0.00 0.00 0.00 2.66
87 88 3.632145 CAGTTGTTGTTGCCCTTCTAGTT 59.368 43.478 0.00 0.00 0.00 2.24
88 89 3.214328 CAGTTGTTGTTGCCCTTCTAGT 58.786 45.455 0.00 0.00 0.00 2.57
89 90 2.030805 GCAGTTGTTGTTGCCCTTCTAG 60.031 50.000 0.00 0.00 34.28 2.43
90 91 1.953686 GCAGTTGTTGTTGCCCTTCTA 59.046 47.619 0.00 0.00 34.28 2.10
91 92 0.746659 GCAGTTGTTGTTGCCCTTCT 59.253 50.000 0.00 0.00 34.28 2.85
92 93 3.272766 GCAGTTGTTGTTGCCCTTC 57.727 52.632 0.00 0.00 34.28 3.46
97 98 1.885887 TCCTATGGCAGTTGTTGTTGC 59.114 47.619 0.00 0.00 39.56 4.17
98 99 2.095768 CGTCCTATGGCAGTTGTTGTTG 60.096 50.000 0.00 0.00 0.00 3.33
99 100 2.151202 CGTCCTATGGCAGTTGTTGTT 58.849 47.619 0.00 0.00 0.00 2.83
100 101 1.346395 TCGTCCTATGGCAGTTGTTGT 59.654 47.619 0.00 0.00 0.00 3.32
101 102 1.732259 GTCGTCCTATGGCAGTTGTTG 59.268 52.381 0.00 0.00 0.00 3.33
102 103 1.346395 TGTCGTCCTATGGCAGTTGTT 59.654 47.619 0.00 0.00 0.00 2.83
103 104 0.973632 TGTCGTCCTATGGCAGTTGT 59.026 50.000 0.00 0.00 0.00 3.32
104 105 2.093306 TTGTCGTCCTATGGCAGTTG 57.907 50.000 0.00 0.00 0.00 3.16
105 106 3.451178 ACTATTGTCGTCCTATGGCAGTT 59.549 43.478 0.00 0.00 0.00 3.16
106 107 3.031736 ACTATTGTCGTCCTATGGCAGT 58.968 45.455 0.00 0.00 0.00 4.40
107 108 3.735237 ACTATTGTCGTCCTATGGCAG 57.265 47.619 0.00 0.00 0.00 4.85
108 109 3.955551 TGTACTATTGTCGTCCTATGGCA 59.044 43.478 0.00 0.00 0.00 4.92
109 110 4.579454 TGTACTATTGTCGTCCTATGGC 57.421 45.455 0.00 0.00 0.00 4.40
110 111 5.898174 TGTTGTACTATTGTCGTCCTATGG 58.102 41.667 0.00 0.00 0.00 2.74
111 112 9.343103 GATATGTTGTACTATTGTCGTCCTATG 57.657 37.037 0.00 0.00 0.00 2.23
112 113 9.074576 TGATATGTTGTACTATTGTCGTCCTAT 57.925 33.333 0.00 0.00 0.00 2.57
113 114 8.454570 TGATATGTTGTACTATTGTCGTCCTA 57.545 34.615 0.00 0.00 0.00 2.94
114 115 7.068348 ACTGATATGTTGTACTATTGTCGTCCT 59.932 37.037 0.00 0.00 0.00 3.85
115 116 7.201145 ACTGATATGTTGTACTATTGTCGTCC 58.799 38.462 0.00 0.00 0.00 4.79
116 117 8.630278 AACTGATATGTTGTACTATTGTCGTC 57.370 34.615 0.00 0.00 0.00 4.20
117 118 8.997621 AAACTGATATGTTGTACTATTGTCGT 57.002 30.769 0.00 0.00 0.00 4.34
131 132 9.331282 GGCTAGTTCATCTTTAAACTGATATGT 57.669 33.333 0.00 0.00 36.44 2.29
132 133 9.330063 TGGCTAGTTCATCTTTAAACTGATATG 57.670 33.333 0.00 0.00 36.44 1.78
133 134 9.905713 TTGGCTAGTTCATCTTTAAACTGATAT 57.094 29.630 0.00 0.00 36.44 1.63
134 135 9.162764 GTTGGCTAGTTCATCTTTAAACTGATA 57.837 33.333 0.00 0.00 36.44 2.15
135 136 7.665559 TGTTGGCTAGTTCATCTTTAAACTGAT 59.334 33.333 0.00 0.00 36.44 2.90
136 137 6.995686 TGTTGGCTAGTTCATCTTTAAACTGA 59.004 34.615 0.00 0.00 36.44 3.41
137 138 7.202016 TGTTGGCTAGTTCATCTTTAAACTG 57.798 36.000 0.00 0.00 36.44 3.16
138 139 7.040409 CCTTGTTGGCTAGTTCATCTTTAAACT 60.040 37.037 0.00 0.00 39.07 2.66
139 140 7.084486 CCTTGTTGGCTAGTTCATCTTTAAAC 58.916 38.462 0.00 0.00 0.00 2.01
140 141 7.214467 CCTTGTTGGCTAGTTCATCTTTAAA 57.786 36.000 0.00 0.00 0.00 1.52
141 142 6.817765 CCTTGTTGGCTAGTTCATCTTTAA 57.182 37.500 0.00 0.00 0.00 1.52
164 165 3.516615 TGTTTACTTGTTGGCTTGTTGC 58.483 40.909 0.00 0.00 41.94 4.17
165 166 6.754209 TGTATTGTTTACTTGTTGGCTTGTTG 59.246 34.615 0.00 0.00 0.00 3.33
166 167 6.868622 TGTATTGTTTACTTGTTGGCTTGTT 58.131 32.000 0.00 0.00 0.00 2.83
167 168 6.458232 TGTATTGTTTACTTGTTGGCTTGT 57.542 33.333 0.00 0.00 0.00 3.16
168 169 7.945033 ATTGTATTGTTTACTTGTTGGCTTG 57.055 32.000 0.00 0.00 0.00 4.01
169 170 8.634444 TGTATTGTATTGTTTACTTGTTGGCTT 58.366 29.630 0.00 0.00 0.00 4.35
170 171 8.172352 TGTATTGTATTGTTTACTTGTTGGCT 57.828 30.769 0.00 0.00 0.00 4.75
171 172 8.696175 GTTGTATTGTATTGTTTACTTGTTGGC 58.304 33.333 0.00 0.00 0.00 4.52
172 173 8.897809 CGTTGTATTGTATTGTTTACTTGTTGG 58.102 33.333 0.00 0.00 0.00 3.77
173 174 9.653067 TCGTTGTATTGTATTGTTTACTTGTTG 57.347 29.630 0.00 0.00 0.00 3.33
174 175 9.654417 GTCGTTGTATTGTATTGTTTACTTGTT 57.346 29.630 0.00 0.00 0.00 2.83
175 176 8.828644 TGTCGTTGTATTGTATTGTTTACTTGT 58.171 29.630 0.00 0.00 0.00 3.16
176 177 9.653067 TTGTCGTTGTATTGTATTGTTTACTTG 57.347 29.630 0.00 0.00 0.00 3.16
177 178 9.654417 GTTGTCGTTGTATTGTATTGTTTACTT 57.346 29.630 0.00 0.00 0.00 2.24
178 179 9.048446 AGTTGTCGTTGTATTGTATTGTTTACT 57.952 29.630 0.00 0.00 0.00 2.24
179 180 9.654417 AAGTTGTCGTTGTATTGTATTGTTTAC 57.346 29.630 0.00 0.00 0.00 2.01
180 181 9.653067 CAAGTTGTCGTTGTATTGTATTGTTTA 57.347 29.630 0.00 0.00 0.00 2.01
181 182 7.646130 CCAAGTTGTCGTTGTATTGTATTGTTT 59.354 33.333 1.45 0.00 0.00 2.83
182 183 7.012515 TCCAAGTTGTCGTTGTATTGTATTGTT 59.987 33.333 1.45 0.00 0.00 2.83
183 184 6.483974 TCCAAGTTGTCGTTGTATTGTATTGT 59.516 34.615 1.45 0.00 0.00 2.71
184 185 6.893759 TCCAAGTTGTCGTTGTATTGTATTG 58.106 36.000 1.45 0.00 0.00 1.90
185 186 7.499321 TTCCAAGTTGTCGTTGTATTGTATT 57.501 32.000 1.45 0.00 0.00 1.89
186 187 7.499321 TTTCCAAGTTGTCGTTGTATTGTAT 57.501 32.000 1.45 0.00 0.00 2.29
187 188 6.922247 TTTCCAAGTTGTCGTTGTATTGTA 57.078 33.333 1.45 0.00 0.00 2.41
188 189 5.821516 TTTCCAAGTTGTCGTTGTATTGT 57.178 34.783 1.45 0.00 0.00 2.71
189 190 8.964420 ATAATTTCCAAGTTGTCGTTGTATTG 57.036 30.769 1.45 0.00 0.00 1.90
190 191 9.620660 GAATAATTTCCAAGTTGTCGTTGTATT 57.379 29.630 1.45 0.00 0.00 1.89
191 192 8.788806 TGAATAATTTCCAAGTTGTCGTTGTAT 58.211 29.630 1.45 0.00 0.00 2.29
192 193 8.155821 TGAATAATTTCCAAGTTGTCGTTGTA 57.844 30.769 1.45 0.00 0.00 2.41
193 194 7.012894 TCTGAATAATTTCCAAGTTGTCGTTGT 59.987 33.333 1.45 0.00 0.00 3.32
194 195 7.359595 TCTGAATAATTTCCAAGTTGTCGTTG 58.640 34.615 1.45 0.00 0.00 4.10
195 196 7.504924 TCTGAATAATTTCCAAGTTGTCGTT 57.495 32.000 1.45 0.00 0.00 3.85
196 197 7.504924 TTCTGAATAATTTCCAAGTTGTCGT 57.495 32.000 1.45 0.00 0.00 4.34
197 198 8.236586 TGATTCTGAATAATTTCCAAGTTGTCG 58.763 33.333 2.28 0.00 0.00 4.35
198 199 9.346725 GTGATTCTGAATAATTTCCAAGTTGTC 57.653 33.333 2.28 0.00 0.00 3.18
199 200 9.082313 AGTGATTCTGAATAATTTCCAAGTTGT 57.918 29.630 2.28 0.00 0.00 3.32
200 201 9.565213 GAGTGATTCTGAATAATTTCCAAGTTG 57.435 33.333 2.28 0.00 0.00 3.16
201 202 9.525826 AGAGTGATTCTGAATAATTTCCAAGTT 57.474 29.630 2.28 0.00 33.93 2.66
202 203 9.171877 GAGAGTGATTCTGAATAATTTCCAAGT 57.828 33.333 2.28 0.00 35.87 3.16
203 204 9.170734 TGAGAGTGATTCTGAATAATTTCCAAG 57.829 33.333 2.28 0.00 35.87 3.61
204 205 9.690913 ATGAGAGTGATTCTGAATAATTTCCAA 57.309 29.630 2.28 0.00 35.87 3.53
205 206 9.690913 AATGAGAGTGATTCTGAATAATTTCCA 57.309 29.630 2.28 0.00 35.87 3.53
211 212 9.895138 TCATCAAATGAGAGTGATTCTGAATAA 57.105 29.630 2.28 0.00 35.87 1.40
212 213 9.895138 TTCATCAAATGAGAGTGATTCTGAATA 57.105 29.630 2.28 0.00 40.94 1.75
213 214 8.675504 GTTCATCAAATGAGAGTGATTCTGAAT 58.324 33.333 1.81 1.81 40.94 2.57
214 215 7.120285 GGTTCATCAAATGAGAGTGATTCTGAA 59.880 37.037 0.00 0.00 40.94 3.02
215 216 6.596888 GGTTCATCAAATGAGAGTGATTCTGA 59.403 38.462 0.00 0.00 40.94 3.27
216 217 6.373495 TGGTTCATCAAATGAGAGTGATTCTG 59.627 38.462 0.00 0.00 40.94 3.02
217 218 6.479006 TGGTTCATCAAATGAGAGTGATTCT 58.521 36.000 0.00 0.00 40.94 2.40
218 219 6.596888 TCTGGTTCATCAAATGAGAGTGATTC 59.403 38.462 0.00 0.00 40.94 2.52
219 220 6.479006 TCTGGTTCATCAAATGAGAGTGATT 58.521 36.000 0.00 0.00 40.94 2.57
220 221 6.058553 TCTGGTTCATCAAATGAGAGTGAT 57.941 37.500 0.00 0.00 40.94 3.06
221 222 5.488262 TCTGGTTCATCAAATGAGAGTGA 57.512 39.130 0.00 0.00 40.94 3.41
222 223 5.066117 CCATCTGGTTCATCAAATGAGAGTG 59.934 44.000 0.00 0.00 40.94 3.51
223 224 5.191426 CCATCTGGTTCATCAAATGAGAGT 58.809 41.667 0.00 0.00 40.94 3.24
224 225 5.752892 CCATCTGGTTCATCAAATGAGAG 57.247 43.478 0.00 0.00 40.94 3.20
239 240 1.771565 ACCATGCATTCACCATCTGG 58.228 50.000 0.00 0.00 42.17 3.86
240 241 4.139038 TGATACCATGCATTCACCATCTG 58.861 43.478 0.00 0.00 0.00 2.90
241 242 4.442401 TGATACCATGCATTCACCATCT 57.558 40.909 0.00 0.00 0.00 2.90
242 243 5.008331 AGATGATACCATGCATTCACCATC 58.992 41.667 0.00 7.05 32.09 3.51
243 244 4.994282 AGATGATACCATGCATTCACCAT 58.006 39.130 0.00 0.00 32.09 3.55
244 245 4.442401 AGATGATACCATGCATTCACCA 57.558 40.909 0.00 0.00 32.09 4.17
245 246 4.217118 GGAAGATGATACCATGCATTCACC 59.783 45.833 0.00 0.00 32.09 4.02
246 247 4.083643 CGGAAGATGATACCATGCATTCAC 60.084 45.833 0.00 0.00 32.09 3.18
247 248 4.067192 CGGAAGATGATACCATGCATTCA 58.933 43.478 0.00 0.00 32.09 2.57
248 249 4.318332 TCGGAAGATGATACCATGCATTC 58.682 43.478 0.00 0.00 32.09 2.67
249 250 4.356405 TCGGAAGATGATACCATGCATT 57.644 40.909 0.00 0.00 32.09 3.56
264 265 5.518487 GCTAGTTCTTCTTCTGAATCGGAAG 59.482 44.000 22.40 22.40 45.31 3.46
265 266 5.186021 AGCTAGTTCTTCTTCTGAATCGGAA 59.814 40.000 4.27 4.27 0.00 4.30
266 267 4.707448 AGCTAGTTCTTCTTCTGAATCGGA 59.293 41.667 0.00 0.00 0.00 4.55
267 268 4.803088 CAGCTAGTTCTTCTTCTGAATCGG 59.197 45.833 0.00 0.00 31.72 4.18
268 269 5.514914 GTCAGCTAGTTCTTCTTCTGAATCG 59.485 44.000 0.00 0.00 36.81 3.34
269 270 6.630071 AGTCAGCTAGTTCTTCTTCTGAATC 58.370 40.000 0.00 0.00 36.81 2.52
270 271 6.350949 GGAGTCAGCTAGTTCTTCTTCTGAAT 60.351 42.308 0.00 0.00 36.81 2.57
271 272 5.047660 GGAGTCAGCTAGTTCTTCTTCTGAA 60.048 44.000 0.00 0.00 36.81 3.02
272 273 4.461081 GGAGTCAGCTAGTTCTTCTTCTGA 59.539 45.833 0.00 0.00 34.58 3.27
273 274 4.219507 TGGAGTCAGCTAGTTCTTCTTCTG 59.780 45.833 0.00 0.00 0.00 3.02
274 275 4.411927 TGGAGTCAGCTAGTTCTTCTTCT 58.588 43.478 0.00 0.00 0.00 2.85
275 276 4.792521 TGGAGTCAGCTAGTTCTTCTTC 57.207 45.455 0.00 0.00 0.00 2.87
276 277 4.591072 AGTTGGAGTCAGCTAGTTCTTCTT 59.409 41.667 0.00 0.00 32.57 2.52
277 278 4.156477 AGTTGGAGTCAGCTAGTTCTTCT 58.844 43.478 0.00 0.00 32.57 2.85
278 279 4.021894 TGAGTTGGAGTCAGCTAGTTCTTC 60.022 45.833 0.00 0.00 34.53 2.87
279 280 3.898123 TGAGTTGGAGTCAGCTAGTTCTT 59.102 43.478 0.00 0.00 34.53 2.52
280 281 3.501349 TGAGTTGGAGTCAGCTAGTTCT 58.499 45.455 0.00 0.00 34.53 3.01
281 282 3.944055 TGAGTTGGAGTCAGCTAGTTC 57.056 47.619 0.00 0.00 34.53 3.01
282 283 4.093011 AGATGAGTTGGAGTCAGCTAGTT 58.907 43.478 1.97 0.00 41.97 2.24
283 284 3.707316 AGATGAGTTGGAGTCAGCTAGT 58.293 45.455 1.97 0.00 41.97 2.57
284 285 4.159321 TGAAGATGAGTTGGAGTCAGCTAG 59.841 45.833 4.19 0.00 42.85 3.42
285 286 4.081972 GTGAAGATGAGTTGGAGTCAGCTA 60.082 45.833 4.19 0.00 42.85 3.32
286 287 2.902486 TGAAGATGAGTTGGAGTCAGCT 59.098 45.455 0.00 0.00 45.30 4.24
287 288 2.999355 GTGAAGATGAGTTGGAGTCAGC 59.001 50.000 0.00 0.00 34.35 4.26
288 289 3.057245 TCGTGAAGATGAGTTGGAGTCAG 60.057 47.826 0.00 0.00 29.98 3.51
289 290 2.890945 TCGTGAAGATGAGTTGGAGTCA 59.109 45.455 0.00 0.00 31.21 3.41
290 291 3.577649 TCGTGAAGATGAGTTGGAGTC 57.422 47.619 0.00 0.00 0.00 3.36
291 292 4.336889 TTTCGTGAAGATGAGTTGGAGT 57.663 40.909 0.00 0.00 0.00 3.85
292 293 5.007626 TGTTTTTCGTGAAGATGAGTTGGAG 59.992 40.000 0.00 0.00 0.00 3.86
293 294 4.878971 TGTTTTTCGTGAAGATGAGTTGGA 59.121 37.500 0.00 0.00 0.00 3.53
294 295 5.168526 TGTTTTTCGTGAAGATGAGTTGG 57.831 39.130 0.00 0.00 0.00 3.77
295 296 5.207768 CCTGTTTTTCGTGAAGATGAGTTG 58.792 41.667 0.00 0.00 0.00 3.16
296 297 4.275936 CCCTGTTTTTCGTGAAGATGAGTT 59.724 41.667 0.00 0.00 0.00 3.01
297 298 3.815401 CCCTGTTTTTCGTGAAGATGAGT 59.185 43.478 0.00 0.00 0.00 3.41
298 299 4.065088 TCCCTGTTTTTCGTGAAGATGAG 58.935 43.478 0.00 0.00 0.00 2.90
299 300 4.065088 CTCCCTGTTTTTCGTGAAGATGA 58.935 43.478 0.00 0.00 0.00 2.92
300 301 3.365364 GCTCCCTGTTTTTCGTGAAGATG 60.365 47.826 0.00 0.00 0.00 2.90
301 302 2.814336 GCTCCCTGTTTTTCGTGAAGAT 59.186 45.455 0.00 0.00 0.00 2.40
302 303 2.218603 GCTCCCTGTTTTTCGTGAAGA 58.781 47.619 0.00 0.00 0.00 2.87
303 304 1.946768 TGCTCCCTGTTTTTCGTGAAG 59.053 47.619 0.00 0.00 0.00 3.02
304 305 1.946768 CTGCTCCCTGTTTTTCGTGAA 59.053 47.619 0.00 0.00 0.00 3.18
305 306 1.134220 ACTGCTCCCTGTTTTTCGTGA 60.134 47.619 0.00 0.00 0.00 4.35
306 307 1.308998 ACTGCTCCCTGTTTTTCGTG 58.691 50.000 0.00 0.00 0.00 4.35
307 308 2.052782 AACTGCTCCCTGTTTTTCGT 57.947 45.000 0.00 0.00 30.07 3.85
308 309 3.436700 AAAACTGCTCCCTGTTTTTCG 57.563 42.857 5.86 0.00 45.12 3.46
326 327 1.071071 TCGCCCTCGGAAGAAGAAAAA 59.929 47.619 0.00 0.00 41.32 1.94
327 328 0.682852 TCGCCCTCGGAAGAAGAAAA 59.317 50.000 0.00 0.00 41.32 2.29
328 329 0.246635 CTCGCCCTCGGAAGAAGAAA 59.753 55.000 0.00 0.00 41.32 2.52
329 330 0.611062 TCTCGCCCTCGGAAGAAGAA 60.611 55.000 0.00 0.00 41.32 2.52
330 331 0.395862 ATCTCGCCCTCGGAAGAAGA 60.396 55.000 0.00 0.00 41.32 2.87
331 332 0.461961 AATCTCGCCCTCGGAAGAAG 59.538 55.000 0.00 0.00 41.32 2.85
332 333 0.175760 CAATCTCGCCCTCGGAAGAA 59.824 55.000 0.00 0.00 41.32 2.52
333 334 1.676678 CCAATCTCGCCCTCGGAAGA 61.677 60.000 0.00 0.00 36.13 2.87
334 335 1.227380 CCAATCTCGCCCTCGGAAG 60.227 63.158 0.00 0.00 36.13 3.46
335 336 2.731571 CCCAATCTCGCCCTCGGAA 61.732 63.158 0.00 0.00 36.13 4.30
336 337 3.154473 CCCAATCTCGCCCTCGGA 61.154 66.667 0.00 0.00 36.13 4.55
337 338 3.154473 TCCCAATCTCGCCCTCGG 61.154 66.667 0.00 0.00 36.13 4.63
338 339 2.107141 GTCCCAATCTCGCCCTCG 59.893 66.667 0.00 0.00 0.00 4.63
339 340 2.107141 CGTCCCAATCTCGCCCTC 59.893 66.667 0.00 0.00 0.00 4.30
340 341 4.162690 GCGTCCCAATCTCGCCCT 62.163 66.667 0.00 0.00 43.41 5.19
344 345 0.457851 AAGAGAGCGTCCCAATCTCG 59.542 55.000 0.00 0.00 43.41 4.04
345 346 2.167487 AGAAAGAGAGCGTCCCAATCTC 59.833 50.000 0.00 0.00 39.83 2.75
346 347 2.183679 AGAAAGAGAGCGTCCCAATCT 58.816 47.619 0.00 0.00 0.00 2.40
347 348 2.682155 AGAAAGAGAGCGTCCCAATC 57.318 50.000 0.00 0.00 0.00 2.67
348 349 3.425162 AAAGAAAGAGAGCGTCCCAAT 57.575 42.857 0.00 0.00 0.00 3.16
349 350 2.930826 AAAGAAAGAGAGCGTCCCAA 57.069 45.000 0.00 0.00 0.00 4.12
350 351 2.878406 CAAAAAGAAAGAGAGCGTCCCA 59.122 45.455 0.00 0.00 0.00 4.37
351 352 3.139077 TCAAAAAGAAAGAGAGCGTCCC 58.861 45.455 0.00 0.00 0.00 4.46
352 353 4.716943 CATCAAAAAGAAAGAGAGCGTCC 58.283 43.478 0.00 0.00 0.00 4.79
353 354 4.154717 GCATCAAAAAGAAAGAGAGCGTC 58.845 43.478 0.00 0.00 0.00 5.19
354 355 3.565482 TGCATCAAAAAGAAAGAGAGCGT 59.435 39.130 0.00 0.00 0.00 5.07
355 356 3.910767 GTGCATCAAAAAGAAAGAGAGCG 59.089 43.478 0.00 0.00 0.00 5.03
356 357 4.233005 GGTGCATCAAAAAGAAAGAGAGC 58.767 43.478 0.00 0.00 0.00 4.09
357 358 5.443185 TGGTGCATCAAAAAGAAAGAGAG 57.557 39.130 0.00 0.00 0.00 3.20
358 359 5.360714 AGTTGGTGCATCAAAAAGAAAGAGA 59.639 36.000 15.37 0.00 0.00 3.10
359 360 5.461078 CAGTTGGTGCATCAAAAAGAAAGAG 59.539 40.000 15.37 0.00 0.00 2.85
360 361 5.350633 CAGTTGGTGCATCAAAAAGAAAGA 58.649 37.500 15.37 0.00 0.00 2.52
361 362 5.646467 CAGTTGGTGCATCAAAAAGAAAG 57.354 39.130 15.37 0.00 0.00 2.62
375 376 1.538512 CATCACAAGGAGCAGTTGGTG 59.461 52.381 0.00 0.00 0.00 4.17
376 377 1.143684 ACATCACAAGGAGCAGTTGGT 59.856 47.619 0.00 0.00 0.00 3.67
377 378 1.901591 ACATCACAAGGAGCAGTTGG 58.098 50.000 0.00 0.00 0.00 3.77
378 379 2.880268 TCAACATCACAAGGAGCAGTTG 59.120 45.455 0.00 0.00 37.73 3.16
379 380 3.213206 TCAACATCACAAGGAGCAGTT 57.787 42.857 0.00 0.00 0.00 3.16
380 381 2.936919 TCAACATCACAAGGAGCAGT 57.063 45.000 0.00 0.00 0.00 4.40
381 382 2.159421 GCATCAACATCACAAGGAGCAG 60.159 50.000 0.00 0.00 0.00 4.24
382 383 1.814394 GCATCAACATCACAAGGAGCA 59.186 47.619 0.00 0.00 0.00 4.26
383 384 2.089980 AGCATCAACATCACAAGGAGC 58.910 47.619 0.00 0.00 0.00 4.70
384 385 2.159421 GCAGCATCAACATCACAAGGAG 60.159 50.000 0.00 0.00 0.00 3.69
385 386 1.814394 GCAGCATCAACATCACAAGGA 59.186 47.619 0.00 0.00 0.00 3.36
386 387 1.542472 TGCAGCATCAACATCACAAGG 59.458 47.619 0.00 0.00 0.00 3.61
387 388 2.984471 GTTGCAGCATCAACATCACAAG 59.016 45.455 13.89 0.00 44.18 3.16
388 389 2.624364 AGTTGCAGCATCAACATCACAA 59.376 40.909 18.90 0.00 46.44 3.33
389 390 2.232399 AGTTGCAGCATCAACATCACA 58.768 42.857 18.90 0.00 46.44 3.58
390 391 3.057736 AGAAGTTGCAGCATCAACATCAC 60.058 43.478 20.45 11.02 46.44 3.06
391 392 3.151554 AGAAGTTGCAGCATCAACATCA 58.848 40.909 20.45 0.00 46.44 3.07
392 393 3.844577 AGAAGTTGCAGCATCAACATC 57.155 42.857 18.90 16.60 46.44 3.06
393 394 4.074259 TGTAGAAGTTGCAGCATCAACAT 58.926 39.130 18.90 10.19 46.44 2.71
394 395 3.475575 TGTAGAAGTTGCAGCATCAACA 58.524 40.909 18.90 2.15 46.44 3.33
395 396 4.023707 AGTTGTAGAAGTTGCAGCATCAAC 60.024 41.667 8.50 11.65 44.88 3.18
396 397 4.136796 AGTTGTAGAAGTTGCAGCATCAA 58.863 39.130 8.50 1.18 0.00 2.57
397 398 3.743521 AGTTGTAGAAGTTGCAGCATCA 58.256 40.909 8.50 0.00 0.00 3.07
398 399 4.214119 TGAAGTTGTAGAAGTTGCAGCATC 59.786 41.667 2.55 0.00 0.00 3.91
399 400 4.136796 TGAAGTTGTAGAAGTTGCAGCAT 58.863 39.130 2.55 0.00 0.00 3.79
400 401 3.540617 TGAAGTTGTAGAAGTTGCAGCA 58.459 40.909 2.55 0.00 0.00 4.41
1562 2245 3.312421 TGCTGCAACTTCTACAACTTCAC 59.688 43.478 0.00 0.00 0.00 3.18
2094 3493 9.088512 GCTATAGCGTGCTATATTCAAAATAGT 57.911 33.333 18.99 0.00 39.77 2.12
2200 3600 6.409925 GGTCTTCCTCTCCTAGAATCACTCTA 60.410 46.154 0.00 0.00 35.41 2.43
2201 3601 5.445964 GTCTTCCTCTCCTAGAATCACTCT 58.554 45.833 0.00 0.00 38.28 3.24
2202 3602 4.583073 GGTCTTCCTCTCCTAGAATCACTC 59.417 50.000 0.00 0.00 0.00 3.51
2203 3603 4.017037 TGGTCTTCCTCTCCTAGAATCACT 60.017 45.833 0.00 0.00 34.23 3.41
2204 3604 4.282496 TGGTCTTCCTCTCCTAGAATCAC 58.718 47.826 0.00 0.00 34.23 3.06
2205 3605 4.541705 CTGGTCTTCCTCTCCTAGAATCA 58.458 47.826 0.00 0.00 34.23 2.57
2206 3606 3.895041 CCTGGTCTTCCTCTCCTAGAATC 59.105 52.174 0.00 0.00 34.23 2.52
2207 3607 3.273618 ACCTGGTCTTCCTCTCCTAGAAT 59.726 47.826 0.00 0.00 34.23 2.40
2208 3608 2.655407 ACCTGGTCTTCCTCTCCTAGAA 59.345 50.000 0.00 0.00 34.23 2.10
2209 3609 2.289467 ACCTGGTCTTCCTCTCCTAGA 58.711 52.381 0.00 0.00 34.23 2.43
2210 3610 2.838637 ACCTGGTCTTCCTCTCCTAG 57.161 55.000 0.00 0.00 34.23 3.02
2211 3611 3.627747 GCTAACCTGGTCTTCCTCTCCTA 60.628 52.174 0.00 0.00 34.23 2.94
2212 3612 2.890602 GCTAACCTGGTCTTCCTCTCCT 60.891 54.545 0.00 0.00 34.23 3.69
2213 3613 1.483004 GCTAACCTGGTCTTCCTCTCC 59.517 57.143 0.00 0.00 34.23 3.71
2214 3614 1.483004 GGCTAACCTGGTCTTCCTCTC 59.517 57.143 0.00 0.00 34.23 3.20
2215 3615 1.574263 GGCTAACCTGGTCTTCCTCT 58.426 55.000 0.00 0.00 34.23 3.69
2216 3616 0.175989 CGGCTAACCTGGTCTTCCTC 59.824 60.000 0.00 0.00 34.23 3.71
2217 3617 0.544595 ACGGCTAACCTGGTCTTCCT 60.545 55.000 0.00 0.00 34.23 3.36
2218 3618 0.323957 AACGGCTAACCTGGTCTTCC 59.676 55.000 0.00 0.29 0.00 3.46
2219 3619 2.233186 ACTAACGGCTAACCTGGTCTTC 59.767 50.000 0.00 0.00 0.00 2.87
2220 3620 2.254508 ACTAACGGCTAACCTGGTCTT 58.745 47.619 0.00 0.00 0.00 3.01
2221 3621 1.934410 ACTAACGGCTAACCTGGTCT 58.066 50.000 0.00 0.00 0.00 3.85
2222 3622 2.480932 GCTACTAACGGCTAACCTGGTC 60.481 54.545 0.00 0.00 0.00 4.02
2223 3623 1.479730 GCTACTAACGGCTAACCTGGT 59.520 52.381 0.00 0.00 0.00 4.00
2224 3624 1.479323 TGCTACTAACGGCTAACCTGG 59.521 52.381 0.00 0.00 0.00 4.45
2225 3625 2.953466 TGCTACTAACGGCTAACCTG 57.047 50.000 0.00 0.00 0.00 4.00
2226 3626 2.167900 CCTTGCTACTAACGGCTAACCT 59.832 50.000 0.00 0.00 0.00 3.50
2227 3627 2.093816 ACCTTGCTACTAACGGCTAACC 60.094 50.000 0.00 0.00 0.00 2.85
2228 3628 3.242549 ACCTTGCTACTAACGGCTAAC 57.757 47.619 0.00 0.00 0.00 2.34
2229 3629 3.258872 TGAACCTTGCTACTAACGGCTAA 59.741 43.478 0.00 0.00 0.00 3.09
2230 3630 2.827322 TGAACCTTGCTACTAACGGCTA 59.173 45.455 0.00 0.00 0.00 3.93
2231 3631 1.621814 TGAACCTTGCTACTAACGGCT 59.378 47.619 0.00 0.00 0.00 5.52
2232 3632 2.088950 TGAACCTTGCTACTAACGGC 57.911 50.000 0.00 0.00 0.00 5.68
2233 3633 2.351726 GCATGAACCTTGCTACTAACGG 59.648 50.000 0.00 0.00 37.14 4.44
2234 3634 3.000041 TGCATGAACCTTGCTACTAACG 59.000 45.455 0.00 0.00 40.77 3.18
2235 3635 4.635765 TGATGCATGAACCTTGCTACTAAC 59.364 41.667 2.46 0.00 40.77 2.34
2236 3636 4.842574 TGATGCATGAACCTTGCTACTAA 58.157 39.130 2.46 0.00 40.77 2.24
2237 3637 4.080919 ACTGATGCATGAACCTTGCTACTA 60.081 41.667 2.46 0.00 40.77 1.82
2238 3638 3.276857 CTGATGCATGAACCTTGCTACT 58.723 45.455 2.46 0.00 40.77 2.57
2239 3639 3.012518 ACTGATGCATGAACCTTGCTAC 58.987 45.455 2.46 0.00 40.77 3.58
2240 3640 3.354948 ACTGATGCATGAACCTTGCTA 57.645 42.857 2.46 0.00 40.77 3.49
2241 3641 2.211250 ACTGATGCATGAACCTTGCT 57.789 45.000 2.46 0.00 40.77 3.91
2242 3642 3.441572 ACTAACTGATGCATGAACCTTGC 59.558 43.478 2.46 0.00 40.55 4.01
2243 3643 5.633830 AACTAACTGATGCATGAACCTTG 57.366 39.130 2.46 0.00 0.00 3.61
2244 3644 6.372659 CACTAACTAACTGATGCATGAACCTT 59.627 38.462 2.46 0.00 0.00 3.50
2245 3645 5.877012 CACTAACTAACTGATGCATGAACCT 59.123 40.000 2.46 0.00 0.00 3.50
2246 3646 5.447818 GCACTAACTAACTGATGCATGAACC 60.448 44.000 2.46 0.00 33.27 3.62
2247 3647 5.122239 TGCACTAACTAACTGATGCATGAAC 59.878 40.000 2.46 0.00 38.11 3.18
2248 3648 5.244755 TGCACTAACTAACTGATGCATGAA 58.755 37.500 2.46 0.00 38.11 2.57
2249 3649 4.831107 TGCACTAACTAACTGATGCATGA 58.169 39.130 2.46 0.00 38.11 3.07
2252 3652 4.392754 CACATGCACTAACTAACTGATGCA 59.607 41.667 0.00 0.00 46.19 3.96
2253 3653 4.728882 GCACATGCACTAACTAACTGATGC 60.729 45.833 0.00 0.00 41.59 3.91
2254 3654 4.901814 GCACATGCACTAACTAACTGATG 58.098 43.478 0.00 0.00 41.59 3.07
2269 3669 1.665599 GGCCAACACTTGCACATGC 60.666 57.895 0.00 0.00 42.50 4.06
2270 3670 1.372004 CGGCCAACACTTGCACATG 60.372 57.895 2.24 0.00 0.00 3.21
2271 3671 1.528076 TCGGCCAACACTTGCACAT 60.528 52.632 2.24 0.00 0.00 3.21
2272 3672 2.124529 TCGGCCAACACTTGCACA 60.125 55.556 2.24 0.00 0.00 4.57
2273 3673 0.882927 TAGTCGGCCAACACTTGCAC 60.883 55.000 2.24 0.00 0.00 4.57
2274 3674 0.179043 TTAGTCGGCCAACACTTGCA 60.179 50.000 2.24 0.00 0.00 4.08
2275 3675 0.517316 CTTAGTCGGCCAACACTTGC 59.483 55.000 2.24 0.00 0.00 4.01
2276 3676 1.878953 ACTTAGTCGGCCAACACTTG 58.121 50.000 2.24 1.10 0.00 3.16
2277 3677 2.632987 AACTTAGTCGGCCAACACTT 57.367 45.000 2.24 0.00 0.00 3.16
2278 3678 2.632987 AAACTTAGTCGGCCAACACT 57.367 45.000 2.24 3.64 0.00 3.55
2279 3679 3.703286 AAAAACTTAGTCGGCCAACAC 57.297 42.857 2.24 0.00 0.00 3.32
2398 3798 5.192927 TCGAAACGGAGGGAGTAGTAAATA 58.807 41.667 0.00 0.00 0.00 1.40
2400 3800 3.420893 TCGAAACGGAGGGAGTAGTAAA 58.579 45.455 0.00 0.00 0.00 2.01
2402 3802 2.787473 TCGAAACGGAGGGAGTAGTA 57.213 50.000 0.00 0.00 0.00 1.82
2403 3803 1.915141 TTCGAAACGGAGGGAGTAGT 58.085 50.000 0.00 0.00 0.00 2.73
2404 3804 3.521947 AATTCGAAACGGAGGGAGTAG 57.478 47.619 0.00 0.00 0.00 2.57
2417 3996 7.444183 AGACAAATCCAAGACAAGTAATTCGAA 59.556 33.333 0.00 0.00 0.00 3.71
2418 3997 6.934645 AGACAAATCCAAGACAAGTAATTCGA 59.065 34.615 0.00 0.00 0.00 3.71
2419 3998 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
2420 3999 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
2421 4000 9.965902 ATCTAGACAAATCCAAGACAAGTAATT 57.034 29.630 0.00 0.00 0.00 1.40
2423 4002 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
2426 4005 7.258441 TCGTATCTAGACAAATCCAAGACAAG 58.742 38.462 0.00 0.00 0.00 3.16
2427 4006 7.165460 TCGTATCTAGACAAATCCAAGACAA 57.835 36.000 0.00 0.00 0.00 3.18
2431 4010 9.698309 ATACATTCGTATCTAGACAAATCCAAG 57.302 33.333 0.00 0.00 32.66 3.61
2448 4027 9.737427 CACTAAAATGAGTCTAGATACATTCGT 57.263 33.333 19.92 15.85 32.84 3.85
2449 4028 8.695284 GCACTAAAATGAGTCTAGATACATTCG 58.305 37.037 19.92 15.45 32.84 3.34
2453 4032 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
2460 4039 9.586732 AGAGATATCTAGCACTAAAATGAGTCT 57.413 33.333 4.89 0.00 0.00 3.24
2461 4040 9.624697 CAGAGATATCTAGCACTAAAATGAGTC 57.375 37.037 4.89 0.00 0.00 3.36
2480 4059 9.868160 TCTTGGATTTGTCTAGATACAGAGATA 57.132 33.333 0.00 0.00 0.00 1.98
2481 4060 8.637986 GTCTTGGATTTGTCTAGATACAGAGAT 58.362 37.037 0.00 0.00 0.00 2.75
2482 4061 7.615757 TGTCTTGGATTTGTCTAGATACAGAGA 59.384 37.037 0.00 0.00 0.00 3.10
2483 4062 7.776107 TGTCTTGGATTTGTCTAGATACAGAG 58.224 38.462 0.00 0.00 0.00 3.35
2484 4063 7.718334 TGTCTTGGATTTGTCTAGATACAGA 57.282 36.000 0.00 0.00 0.00 3.41
2485 4064 8.037758 ACTTGTCTTGGATTTGTCTAGATACAG 58.962 37.037 0.00 0.00 0.00 2.74
2486 4065 7.907389 ACTTGTCTTGGATTTGTCTAGATACA 58.093 34.615 0.00 0.00 0.00 2.29
2487 4066 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
2490 4069 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
2491 4070 9.219603 TGAATTACTTGTCTTGGATTTGTCTAG 57.780 33.333 0.00 0.00 0.00 2.43
2492 4071 9.219603 CTGAATTACTTGTCTTGGATTTGTCTA 57.780 33.333 0.00 0.00 0.00 2.59
2500 4211 4.994852 CCGTTCTGAATTACTTGTCTTGGA 59.005 41.667 0.00 0.00 0.00 3.53
2501 4212 4.994852 TCCGTTCTGAATTACTTGTCTTGG 59.005 41.667 0.00 0.00 0.00 3.61
2503 4214 5.238583 CCTCCGTTCTGAATTACTTGTCTT 58.761 41.667 0.00 0.00 0.00 3.01
2507 4218 4.184629 CTCCCTCCGTTCTGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2508 4219 3.838903 ACTCCCTCCGTTCTGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
2509 4220 3.442076 ACTCCCTCCGTTCTGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
2510 4221 3.889520 ACTCCCTCCGTTCTGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
2511 4222 6.070424 ACATTTACTCCCTCCGTTCTGAATTA 60.070 38.462 0.00 0.00 0.00 1.40
2513 4224 4.225267 ACATTTACTCCCTCCGTTCTGAAT 59.775 41.667 0.00 0.00 0.00 2.57
2516 4227 3.611766 ACATTTACTCCCTCCGTTCTG 57.388 47.619 0.00 0.00 0.00 3.02
2517 4228 3.307480 CCAACATTTACTCCCTCCGTTCT 60.307 47.826 0.00 0.00 0.00 3.01
2518 4229 3.007635 CCAACATTTACTCCCTCCGTTC 58.992 50.000 0.00 0.00 0.00 3.95
2519 4230 2.374170 ACCAACATTTACTCCCTCCGTT 59.626 45.455 0.00 0.00 0.00 4.44
2544 4355 2.362889 GATGGGCCAGGGTGGTTG 60.363 66.667 13.78 0.00 40.46 3.77
2545 4356 2.863484 TGATGGGCCAGGGTGGTT 60.863 61.111 13.78 0.00 40.46 3.67
2550 4361 3.047807 ATCACGTGATGGGCCAGGG 62.048 63.158 29.49 0.00 32.68 4.45
2592 4403 4.088634 AGAGAAGAGAGCTGTCACATTCT 58.911 43.478 14.08 12.92 0.00 2.40
2642 4453 9.554724 CGAGTTAAATTAGCAAAGCTGAAATAA 57.445 29.630 1.04 0.00 40.10 1.40
2717 4529 1.282930 GGTCTGAACGCCACGAGTTC 61.283 60.000 0.00 1.83 45.85 3.01
2718 4530 1.300697 GGTCTGAACGCCACGAGTT 60.301 57.895 0.00 0.00 34.07 3.01
2719 4531 1.745320 AAGGTCTGAACGCCACGAGT 61.745 55.000 0.00 0.00 0.00 4.18
2720 4532 0.600255 AAAGGTCTGAACGCCACGAG 60.600 55.000 0.00 0.00 0.00 4.18
2721 4533 0.675083 TAAAGGTCTGAACGCCACGA 59.325 50.000 0.00 0.00 0.00 4.35
2722 4534 1.504359 TTAAAGGTCTGAACGCCACG 58.496 50.000 0.00 0.00 0.00 4.94
2723 4535 3.065648 TGTTTTAAAGGTCTGAACGCCAC 59.934 43.478 0.00 0.00 0.00 5.01
2724 4536 3.280295 TGTTTTAAAGGTCTGAACGCCA 58.720 40.909 0.00 0.00 0.00 5.69
2725 4537 3.974871 TGTTTTAAAGGTCTGAACGCC 57.025 42.857 0.00 0.00 0.00 5.68
2726 4538 5.164606 TCTTGTTTTAAAGGTCTGAACGC 57.835 39.130 0.00 0.00 0.00 4.84
2727 4539 6.954944 TGATCTTGTTTTAAAGGTCTGAACG 58.045 36.000 0.00 0.00 38.02 3.95
2728 4540 9.399403 GATTGATCTTGTTTTAAAGGTCTGAAC 57.601 33.333 0.00 0.00 38.02 3.18
2729 4541 9.354673 AGATTGATCTTGTTTTAAAGGTCTGAA 57.645 29.630 0.00 0.00 38.02 3.02
2730 4542 8.924511 AGATTGATCTTGTTTTAAAGGTCTGA 57.075 30.769 0.00 0.00 38.02 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.