Multiple sequence alignment - TraesCS2B01G597000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G597000 chr2B 100.000 2444 0 0 1 2444 780593577 780596020 0.000000e+00 4514
1 TraesCS2B01G597000 chr2B 89.398 415 44 0 435 849 784189178 784189592 7.740000e-145 523
2 TraesCS2B01G597000 chr2B 86.100 482 67 0 967 1448 784189606 784190087 1.000000e-143 520
3 TraesCS2B01G597000 chr2B 84.080 402 64 0 24 425 784188695 784189096 2.950000e-104 388
4 TraesCS2B01G597000 chr2A 94.493 345 16 2 1743 2084 776552318 776551974 1.660000e-146 529
5 TraesCS2B01G597000 chr2A 85.053 475 67 4 967 1439 764309970 764310442 4.730000e-132 481
6 TraesCS2B01G597000 chr2A 87.218 399 51 0 27 425 764309062 764309460 2.860000e-124 455
7 TraesCS2B01G597000 chr2A 95.050 101 5 0 1494 1594 776552424 776552324 2.520000e-35 159
8 TraesCS2B01G597000 chr2A 92.308 104 4 4 2115 2215 776551912 776551810 7.040000e-31 145
9 TraesCS2B01G597000 chr2A 92.771 83 5 1 2362 2443 537266261 537266179 4.270000e-23 119
10 TraesCS2B01G597000 chr2D 84.254 489 71 5 967 1452 638725145 638725630 2.840000e-129 472
11 TraesCS2B01G597000 chr2D 85.301 415 59 2 435 848 638724717 638725130 6.250000e-116 427
12 TraesCS2B01G597000 chr2D 88.263 213 12 1 1494 1706 651279084 651279283 2.430000e-60 243
13 TraesCS2B01G597000 chr2D 92.857 112 6 2 859 968 344879987 344879876 6.990000e-36 161
14 TraesCS2B01G597000 chr7D 79.616 417 75 8 435 849 460280283 460280691 8.550000e-75 291
15 TraesCS2B01G597000 chr7A 78.654 431 84 6 435 864 539325410 539324987 1.850000e-71 279
16 TraesCS2B01G597000 chr7A 92.857 112 6 2 859 968 600791730 600791841 6.990000e-36 161
17 TraesCS2B01G597000 chr7A 93.976 83 4 1 2363 2444 57699094 57699176 9.180000e-25 124
18 TraesCS2B01G597000 chr7A 93.976 83 4 1 2363 2444 732847439 732847521 9.180000e-25 124
19 TraesCS2B01G597000 chr7A 90.217 92 5 4 2356 2444 370677413 370677503 1.540000e-22 117
20 TraesCS2B01G597000 chr4A 92.920 113 6 2 860 970 729138367 729138479 1.940000e-36 163
21 TraesCS2B01G597000 chr1B 93.578 109 6 1 863 970 113565230 113565122 6.990000e-36 161
22 TraesCS2B01G597000 chr1B 92.793 111 7 1 859 968 342877280 342877390 2.520000e-35 159
23 TraesCS2B01G597000 chr5D 92.035 113 8 1 860 971 555341063 555341175 9.050000e-35 158
24 TraesCS2B01G597000 chr7B 91.304 115 8 2 856 969 730205226 730205113 3.250000e-34 156
25 TraesCS2B01G597000 chr7B 89.344 122 10 3 848 968 674193657 674193776 1.510000e-32 150
26 TraesCS2B01G597000 chr7B 91.011 89 5 3 2359 2444 448461602 448461690 1.540000e-22 117
27 TraesCS2B01G597000 chr3D 90.517 116 9 2 862 976 41211721 41211607 4.210000e-33 152
28 TraesCS2B01G597000 chr3D 95.122 82 3 1 2364 2444 460456426 460456345 7.090000e-26 128
29 TraesCS2B01G597000 chr5A 95.122 82 3 1 2364 2444 561697410 561697329 7.090000e-26 128
30 TraesCS2B01G597000 chr5A 96.104 77 2 1 2369 2444 379897621 379897545 9.180000e-25 124
31 TraesCS2B01G597000 chr4B 93.827 81 4 1 2364 2443 240823298 240823218 1.190000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G597000 chr2B 780593577 780596020 2443 False 4514.000000 4514 100.000000 1 2444 1 chr2B.!!$F1 2443
1 TraesCS2B01G597000 chr2B 784188695 784190087 1392 False 477.000000 523 86.526000 24 1448 3 chr2B.!!$F2 1424
2 TraesCS2B01G597000 chr2A 764309062 764310442 1380 False 468.000000 481 86.135500 27 1439 2 chr2A.!!$F1 1412
3 TraesCS2B01G597000 chr2A 776551810 776552424 614 True 277.666667 529 93.950333 1494 2215 3 chr2A.!!$R2 721
4 TraesCS2B01G597000 chr2D 638724717 638725630 913 False 449.500000 472 84.777500 435 1452 2 chr2D.!!$F2 1017

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 676 0.039035 ATCCCGCCTCTCCTAGCTAG 59.961 60.0 14.2 14.2 0.0 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2173 2291 0.108329 CGGTCGGCACTGGATAAAGT 60.108 55.0 0.0 0.0 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.585006 ATTCACAAGCAGCTGCAGC 59.415 52.632 38.24 31.53 45.16 5.25
19 20 1.176619 ATTCACAAGCAGCTGCAGCA 61.177 50.000 38.24 16.53 45.16 4.41
20 21 1.792118 TTCACAAGCAGCTGCAGCAG 61.792 55.000 38.24 31.89 45.16 4.24
21 22 2.112507 ACAAGCAGCTGCAGCAGA 59.887 55.556 38.24 0.00 45.16 4.26
22 23 1.527611 ACAAGCAGCTGCAGCAGAA 60.528 52.632 38.24 0.00 45.16 3.02
77 78 3.081804 CTCCGTTGCCTTAAACTCCATT 58.918 45.455 0.00 0.00 0.00 3.16
81 82 4.475944 CGTTGCCTTAAACTCCATTTCAG 58.524 43.478 0.00 0.00 0.00 3.02
84 85 3.507233 TGCCTTAAACTCCATTTCAGCAG 59.493 43.478 0.00 0.00 30.47 4.24
88 89 5.335976 CCTTAAACTCCATTTCAGCAGTTCC 60.336 44.000 0.00 0.00 0.00 3.62
89 90 2.957402 ACTCCATTTCAGCAGTTCCA 57.043 45.000 0.00 0.00 0.00 3.53
92 93 3.327757 ACTCCATTTCAGCAGTTCCACTA 59.672 43.478 0.00 0.00 0.00 2.74
98 99 3.162147 TCAGCAGTTCCACTAGACTCT 57.838 47.619 0.00 0.00 0.00 3.24
101 102 5.077564 TCAGCAGTTCCACTAGACTCTTAA 58.922 41.667 0.00 0.00 0.00 1.85
106 107 5.018149 AGTTCCACTAGACTCTTAACCTCC 58.982 45.833 0.00 0.00 0.00 4.30
141 142 0.843309 TCCCTCCAACAGTTCTGCAA 59.157 50.000 0.00 0.00 0.00 4.08
199 200 1.102978 GTGTTGTTGCACTGGACCTT 58.897 50.000 0.00 0.00 36.51 3.50
200 201 1.065551 GTGTTGTTGCACTGGACCTTC 59.934 52.381 0.00 0.00 36.51 3.46
217 218 2.135933 CTTCAGTCGTTCCACCTTGAC 58.864 52.381 0.00 0.00 0.00 3.18
238 239 1.683385 GGCCAAATACCTCCTTGCATC 59.317 52.381 0.00 0.00 0.00 3.91
274 275 0.613260 TCACAAGAATCCACCTCCCG 59.387 55.000 0.00 0.00 0.00 5.14
275 276 0.392998 CACAAGAATCCACCTCCCGG 60.393 60.000 0.00 0.00 0.00 5.73
283 284 1.078426 CCACCTCCCGGACAATCAC 60.078 63.158 0.73 0.00 0.00 3.06
287 288 0.328258 CCTCCCGGACAATCACCTTT 59.672 55.000 0.73 0.00 0.00 3.11
343 344 1.838077 AGGCTGCGGTATCTTAACCTT 59.162 47.619 0.00 0.00 37.39 3.50
345 346 3.453353 AGGCTGCGGTATCTTAACCTTAA 59.547 43.478 0.00 0.00 37.39 1.85
352 353 7.107542 TGCGGTATCTTAACCTTAACTCAAAT 58.892 34.615 0.00 0.00 37.39 2.32
364 365 7.336396 ACCTTAACTCAAATAATCTTAGCGGT 58.664 34.615 0.00 0.00 0.00 5.68
365 366 7.280205 ACCTTAACTCAAATAATCTTAGCGGTG 59.720 37.037 0.00 0.00 0.00 4.94
367 368 9.309516 CTTAACTCAAATAATCTTAGCGGTGTA 57.690 33.333 0.00 0.00 0.00 2.90
385 386 5.376625 GGTGTAATCCCAAGCAATCTATCA 58.623 41.667 0.00 0.00 0.00 2.15
388 389 5.934043 TGTAATCCCAAGCAATCTATCATCG 59.066 40.000 0.00 0.00 0.00 3.84
397 398 5.851720 AGCAATCTATCATCGTGTTCTCAT 58.148 37.500 0.00 0.00 0.00 2.90
406 407 3.917329 TCGTGTTCTCATCTTCGAGTT 57.083 42.857 0.00 0.00 34.46 3.01
421 422 4.672587 TCGAGTTATTGATCTTGGGAGG 57.327 45.455 0.00 0.00 0.00 4.30
425 426 5.626809 CGAGTTATTGATCTTGGGAGGAACA 60.627 44.000 0.00 0.00 0.00 3.18
431 504 0.613260 TCTTGGGAGGAACACCATCG 59.387 55.000 0.00 0.00 42.29 3.84
433 506 2.124695 GGGAGGAACACCATCGCC 60.125 66.667 0.00 0.00 42.29 5.54
488 561 1.067060 ACCTTTCAGTTTTGCGCCTTC 59.933 47.619 4.18 0.00 0.00 3.46
489 562 1.338020 CCTTTCAGTTTTGCGCCTTCT 59.662 47.619 4.18 0.00 0.00 2.85
560 633 6.847400 TCTTCTCTCAACTCTGTTTATCTCG 58.153 40.000 0.00 0.00 0.00 4.04
571 644 5.730550 TCTGTTTATCTCGCCAACAATAGT 58.269 37.500 0.00 0.00 30.15 2.12
603 676 0.039035 ATCCCGCCTCTCCTAGCTAG 59.961 60.000 14.20 14.20 0.00 3.42
615 688 6.002653 TCTCCTAGCTAGTAGTTCATCACA 57.997 41.667 19.31 0.00 0.00 3.58
632 705 6.457355 TCATCACATCAATTTTTGGTCTTGG 58.543 36.000 0.00 0.00 0.00 3.61
633 706 5.212532 TCACATCAATTTTTGGTCTTGGG 57.787 39.130 0.00 0.00 0.00 4.12
642 715 4.599047 TTTTGGTCTTGGGCAACAATAG 57.401 40.909 0.00 0.00 38.65 1.73
680 753 2.356135 CACCCGCACTATTTAACAGCT 58.644 47.619 0.00 0.00 0.00 4.24
684 757 3.627577 CCCGCACTATTTAACAGCTCATT 59.372 43.478 0.00 0.00 0.00 2.57
734 807 4.352893 ACAACTTTACTGGGTCCATACCTT 59.647 41.667 0.00 0.00 45.95 3.50
743 816 3.655777 TGGGTCCATACCTTCTGTTTTCT 59.344 43.478 0.00 0.00 45.95 2.52
744 817 4.847512 TGGGTCCATACCTTCTGTTTTCTA 59.152 41.667 0.00 0.00 45.95 2.10
767 840 5.630121 ACAATATTGTTGACTCACCCTTGA 58.370 37.500 15.47 0.00 38.47 3.02
781 854 8.840200 ACTCACCCTTGAAGTATCTTATCTTA 57.160 34.615 0.00 0.00 0.00 2.10
782 855 9.440761 ACTCACCCTTGAAGTATCTTATCTTAT 57.559 33.333 0.00 0.00 0.00 1.73
829 902 8.706521 ACAATACCTTCTACTCTAGGGAATTTC 58.293 37.037 0.00 0.00 35.79 2.17
830 903 8.705594 CAATACCTTCTACTCTAGGGAATTTCA 58.294 37.037 0.00 0.00 35.79 2.69
849 922 0.988063 ACTTCCCTTTCCTGGCTCTC 59.012 55.000 0.00 0.00 0.00 3.20
850 923 1.284313 CTTCCCTTTCCTGGCTCTCT 58.716 55.000 0.00 0.00 0.00 3.10
853 926 0.829990 CCCTTTCCTGGCTCTCTCTC 59.170 60.000 0.00 0.00 0.00 3.20
855 928 1.468985 CTTTCCTGGCTCTCTCTCGA 58.531 55.000 0.00 0.00 0.00 4.04
859 932 1.110442 CCTGGCTCTCTCTCGAACAT 58.890 55.000 0.00 0.00 0.00 2.71
862 935 3.320541 CCTGGCTCTCTCTCGAACATAAT 59.679 47.826 0.00 0.00 0.00 1.28
863 936 4.520874 CCTGGCTCTCTCTCGAACATAATA 59.479 45.833 0.00 0.00 0.00 0.98
864 937 5.440234 TGGCTCTCTCTCGAACATAATAC 57.560 43.478 0.00 0.00 0.00 1.89
865 938 5.133941 TGGCTCTCTCTCGAACATAATACT 58.866 41.667 0.00 0.00 0.00 2.12
866 939 5.239744 TGGCTCTCTCTCGAACATAATACTC 59.760 44.000 0.00 0.00 0.00 2.59
867 940 5.335348 GGCTCTCTCTCGAACATAATACTCC 60.335 48.000 0.00 0.00 0.00 3.85
868 941 5.335348 GCTCTCTCTCGAACATAATACTCCC 60.335 48.000 0.00 0.00 0.00 4.30
869 942 5.942961 TCTCTCTCGAACATAATACTCCCT 58.057 41.667 0.00 0.00 0.00 4.20
870 943 5.998981 TCTCTCTCGAACATAATACTCCCTC 59.001 44.000 0.00 0.00 0.00 4.30
871 944 5.071370 TCTCTCGAACATAATACTCCCTCC 58.929 45.833 0.00 0.00 0.00 4.30
872 945 3.819337 TCTCGAACATAATACTCCCTCCG 59.181 47.826 0.00 0.00 0.00 4.63
873 946 3.559069 TCGAACATAATACTCCCTCCGT 58.441 45.455 0.00 0.00 0.00 4.69
874 947 3.956199 TCGAACATAATACTCCCTCCGTT 59.044 43.478 0.00 0.00 0.00 4.44
875 948 4.037208 TCGAACATAATACTCCCTCCGTTC 59.963 45.833 0.00 0.00 0.00 3.95
876 949 4.296690 GAACATAATACTCCCTCCGTTCG 58.703 47.826 0.00 0.00 0.00 3.95
877 950 2.626743 ACATAATACTCCCTCCGTTCGG 59.373 50.000 4.74 4.74 0.00 4.30
878 951 2.734755 TAATACTCCCTCCGTTCGGA 57.265 50.000 13.34 13.34 0.00 4.55
879 952 1.856629 AATACTCCCTCCGTTCGGAA 58.143 50.000 14.79 0.00 33.41 4.30
880 953 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
881 954 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
882 955 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
883 956 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
884 957 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
885 958 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
886 959 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
887 960 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
888 961 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
889 962 1.133025 TCCGTTCGGAATTACTCGTCC 59.867 52.381 11.66 0.00 0.00 4.79
890 963 1.135315 CCGTTCGGAATTACTCGTCCA 60.135 52.381 5.19 0.00 33.10 4.02
891 964 2.182825 CGTTCGGAATTACTCGTCCAG 58.817 52.381 0.00 0.00 33.10 3.86
892 965 2.537401 GTTCGGAATTACTCGTCCAGG 58.463 52.381 0.00 0.00 33.10 4.45
893 966 2.133281 TCGGAATTACTCGTCCAGGA 57.867 50.000 0.00 0.00 33.10 3.86
894 967 2.449464 TCGGAATTACTCGTCCAGGAA 58.551 47.619 0.00 0.00 33.10 3.36
895 968 2.827322 TCGGAATTACTCGTCCAGGAAA 59.173 45.455 0.00 0.00 33.10 3.13
896 969 3.449737 TCGGAATTACTCGTCCAGGAAAT 59.550 43.478 0.00 0.00 33.10 2.17
897 970 3.555956 CGGAATTACTCGTCCAGGAAATG 59.444 47.826 0.00 0.00 33.10 2.32
898 971 4.679639 CGGAATTACTCGTCCAGGAAATGA 60.680 45.833 0.00 0.00 33.10 2.57
899 972 5.183228 GGAATTACTCGTCCAGGAAATGAA 58.817 41.667 0.00 0.00 33.79 2.57
900 973 5.823045 GGAATTACTCGTCCAGGAAATGAAT 59.177 40.000 0.00 0.00 33.79 2.57
901 974 6.238484 GGAATTACTCGTCCAGGAAATGAATG 60.238 42.308 0.00 0.00 33.79 2.67
902 975 3.703001 ACTCGTCCAGGAAATGAATGT 57.297 42.857 0.00 0.00 0.00 2.71
903 976 4.819105 ACTCGTCCAGGAAATGAATGTA 57.181 40.909 0.00 0.00 0.00 2.29
904 977 5.359194 ACTCGTCCAGGAAATGAATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
905 978 5.745227 ACTCGTCCAGGAAATGAATGTATT 58.255 37.500 0.00 0.00 0.00 1.89
906 979 6.180472 ACTCGTCCAGGAAATGAATGTATTT 58.820 36.000 0.00 0.00 33.19 1.40
907 980 7.335627 ACTCGTCCAGGAAATGAATGTATTTA 58.664 34.615 0.00 0.00 30.78 1.40
908 981 7.495934 ACTCGTCCAGGAAATGAATGTATTTAG 59.504 37.037 0.00 0.00 30.78 1.85
909 982 6.765989 TCGTCCAGGAAATGAATGTATTTAGG 59.234 38.462 0.00 0.00 30.78 2.69
910 983 6.542370 CGTCCAGGAAATGAATGTATTTAGGT 59.458 38.462 0.00 0.00 30.78 3.08
911 984 7.467267 CGTCCAGGAAATGAATGTATTTAGGTG 60.467 40.741 0.00 0.00 30.78 4.00
912 985 7.339466 GTCCAGGAAATGAATGTATTTAGGTGT 59.661 37.037 0.00 0.00 30.78 4.16
913 986 8.553153 TCCAGGAAATGAATGTATTTAGGTGTA 58.447 33.333 0.00 0.00 30.78 2.90
914 987 9.354673 CCAGGAAATGAATGTATTTAGGTGTAT 57.645 33.333 0.00 0.00 30.78 2.29
956 1029 9.743057 ATTCATTTTTGTGACAAGTAATTTCGA 57.257 25.926 0.00 0.00 0.00 3.71
957 1030 9.574458 TTCATTTTTGTGACAAGTAATTTCGAA 57.426 25.926 0.00 0.00 0.00 3.71
958 1031 9.015577 TCATTTTTGTGACAAGTAATTTCGAAC 57.984 29.630 0.00 0.00 0.00 3.95
959 1032 7.425915 TTTTTGTGACAAGTAATTTCGAACG 57.574 32.000 0.00 0.00 0.00 3.95
960 1033 5.970140 TTGTGACAAGTAATTTCGAACGA 57.030 34.783 0.00 0.00 0.00 3.85
961 1034 5.970140 TGTGACAAGTAATTTCGAACGAA 57.030 34.783 0.00 5.53 0.00 3.85
962 1035 5.969741 TGTGACAAGTAATTTCGAACGAAG 58.030 37.500 9.46 0.23 35.38 3.79
963 1036 5.050634 TGTGACAAGTAATTTCGAACGAAGG 60.051 40.000 9.46 0.00 35.38 3.46
964 1037 4.449743 TGACAAGTAATTTCGAACGAAGGG 59.550 41.667 9.46 0.00 35.38 3.95
965 1038 3.749609 ACAAGTAATTTCGAACGAAGGGG 59.250 43.478 9.46 0.00 35.38 4.79
993 1066 0.543749 AAGGTAGCATCCCAGTGAGC 59.456 55.000 0.00 0.00 0.00 4.26
1001 1074 2.750807 GCATCCCAGTGAGCATTGGTAT 60.751 50.000 10.56 0.00 36.56 2.73
1015 1088 4.997565 CATTGGTATGCTTACAAACCTGG 58.002 43.478 11.47 0.00 32.99 4.45
1044 1117 9.007901 GTACTAGACCTGAGTTACAACTTCTTA 57.992 37.037 0.00 0.00 39.88 2.10
1107 1180 1.063792 ACATATCTTGCCATGGGTGCA 60.064 47.619 15.13 1.88 36.84 4.57
1114 1187 3.996921 TTGCCATGGGTGCAAATATTT 57.003 38.095 15.13 0.00 45.11 1.40
1143 1216 6.554605 CAGGGGAAATTCCATATAACATTGGT 59.445 38.462 14.68 0.00 38.64 3.67
1165 1238 7.867921 TGGTTATACACTTCCAAGTATCCAAT 58.132 34.615 0.00 0.00 37.08 3.16
1194 1267 5.476945 AGTTATGGGAGTGAACAAATTCCAC 59.523 40.000 0.00 0.00 33.49 4.02
1216 1289 2.358195 GGCCAAATCCCCACTTCACTAT 60.358 50.000 0.00 0.00 0.00 2.12
1234 1307 8.684386 TTCACTATCCAACACAACAAATCTTA 57.316 30.769 0.00 0.00 0.00 2.10
1235 1308 8.862325 TCACTATCCAACACAACAAATCTTAT 57.138 30.769 0.00 0.00 0.00 1.73
1293 1366 1.882623 GTGCCTTCTTTTGGGACTCTG 59.117 52.381 0.00 0.00 41.75 3.35
1306 1379 1.066071 GGACTCTGCCCAACTTACTCC 60.066 57.143 0.00 0.00 0.00 3.85
1325 1398 1.339610 CCACCTGAATCTAGGCGAGAG 59.660 57.143 3.19 0.00 41.75 3.20
1327 1400 2.428890 CACCTGAATCTAGGCGAGAGTT 59.571 50.000 3.19 0.00 41.75 3.01
1329 1402 3.633065 ACCTGAATCTAGGCGAGAGTTAC 59.367 47.826 3.19 0.00 41.75 2.50
1333 1406 3.579534 ATCTAGGCGAGAGTTACCTCA 57.420 47.619 3.19 0.00 40.40 3.86
1334 1407 2.920524 TCTAGGCGAGAGTTACCTCAG 58.079 52.381 0.00 0.00 40.40 3.35
1359 1432 5.003804 GCAGGAGATTGGTCTTTCTTAACA 58.996 41.667 0.00 0.00 33.97 2.41
1365 1438 9.396022 GGAGATTGGTCTTTCTTAACATCATTA 57.604 33.333 0.00 0.00 33.97 1.90
1385 1458 1.152777 CCAACTGCACCCAACTGGA 60.153 57.895 0.00 0.00 37.39 3.86
1399 1472 6.434028 CACCCAACTGGAGAAATTATTCTTGA 59.566 38.462 0.00 0.00 45.91 3.02
1404 1477 7.105241 ACTGGAGAAATTATTCTTGAATGCC 57.895 36.000 6.15 0.00 45.91 4.40
1407 1480 8.081517 TGGAGAAATTATTCTTGAATGCCAAT 57.918 30.769 6.15 0.00 45.91 3.16
1452 1525 6.923199 AGTTCCATTGGATGACTTTGAAAT 57.077 33.333 6.15 0.00 0.00 2.17
1453 1526 6.928520 AGTTCCATTGGATGACTTTGAAATC 58.071 36.000 6.15 0.00 0.00 2.17
1454 1527 5.565592 TCCATTGGATGACTTTGAAATCG 57.434 39.130 0.00 0.00 0.00 3.34
1455 1528 5.009631 TCCATTGGATGACTTTGAAATCGT 58.990 37.500 0.00 0.00 0.00 3.73
1456 1529 6.176896 TCCATTGGATGACTTTGAAATCGTA 58.823 36.000 0.00 0.00 0.00 3.43
1457 1530 6.828273 TCCATTGGATGACTTTGAAATCGTAT 59.172 34.615 0.00 0.00 0.00 3.06
1458 1531 7.339212 TCCATTGGATGACTTTGAAATCGTATT 59.661 33.333 0.00 0.00 0.00 1.89
1459 1532 7.433131 CCATTGGATGACTTTGAAATCGTATTG 59.567 37.037 0.00 0.00 0.00 1.90
1460 1533 7.447374 TTGGATGACTTTGAAATCGTATTGT 57.553 32.000 0.00 0.00 0.00 2.71
1461 1534 6.841119 TGGATGACTTTGAAATCGTATTGTG 58.159 36.000 0.00 0.00 0.00 3.33
1462 1535 5.739161 GGATGACTTTGAAATCGTATTGTGC 59.261 40.000 0.00 0.00 0.00 4.57
1463 1536 5.041951 TGACTTTGAAATCGTATTGTGCC 57.958 39.130 0.00 0.00 0.00 5.01
1464 1537 4.759693 TGACTTTGAAATCGTATTGTGCCT 59.240 37.500 0.00 0.00 0.00 4.75
1465 1538 5.240623 TGACTTTGAAATCGTATTGTGCCTT 59.759 36.000 0.00 0.00 0.00 4.35
1466 1539 5.699839 ACTTTGAAATCGTATTGTGCCTTC 58.300 37.500 0.00 0.00 0.00 3.46
1467 1540 5.473504 ACTTTGAAATCGTATTGTGCCTTCT 59.526 36.000 0.00 0.00 0.00 2.85
1468 1541 5.545658 TTGAAATCGTATTGTGCCTTCTC 57.454 39.130 0.00 0.00 0.00 2.87
1469 1542 4.832248 TGAAATCGTATTGTGCCTTCTCT 58.168 39.130 0.00 0.00 0.00 3.10
1470 1543 5.245531 TGAAATCGTATTGTGCCTTCTCTT 58.754 37.500 0.00 0.00 0.00 2.85
1471 1544 5.122239 TGAAATCGTATTGTGCCTTCTCTTG 59.878 40.000 0.00 0.00 0.00 3.02
1472 1545 2.972625 TCGTATTGTGCCTTCTCTTGG 58.027 47.619 0.00 0.00 0.00 3.61
1473 1546 2.009774 CGTATTGTGCCTTCTCTTGGG 58.990 52.381 0.00 0.00 0.00 4.12
1474 1547 2.354704 CGTATTGTGCCTTCTCTTGGGA 60.355 50.000 0.00 0.00 0.00 4.37
1475 1548 2.206576 ATTGTGCCTTCTCTTGGGAC 57.793 50.000 0.00 0.00 44.62 4.46
1476 1549 1.140312 TTGTGCCTTCTCTTGGGACT 58.860 50.000 6.04 0.00 44.66 3.85
1477 1550 0.687354 TGTGCCTTCTCTTGGGACTC 59.313 55.000 6.04 0.00 44.66 3.36
1478 1551 0.980423 GTGCCTTCTCTTGGGACTCT 59.020 55.000 0.00 0.00 41.75 3.24
1479 1552 1.349357 GTGCCTTCTCTTGGGACTCTT 59.651 52.381 0.00 0.00 41.75 2.85
1480 1553 2.057922 TGCCTTCTCTTGGGACTCTTT 58.942 47.619 0.00 0.00 0.00 2.52
1481 1554 2.039084 TGCCTTCTCTTGGGACTCTTTC 59.961 50.000 0.00 0.00 0.00 2.62
1482 1555 2.616765 GCCTTCTCTTGGGACTCTTTCC 60.617 54.545 0.00 0.00 45.00 3.13
1507 1580 9.025041 CCAACTTATTCAGATCCCTTAAAAGTT 57.975 33.333 0.00 0.00 35.62 2.66
1552 1625 7.080353 AGGTATACTGCAAAACGATTTTACC 57.920 36.000 2.25 6.43 29.99 2.85
1555 1628 3.623863 ACTGCAAAACGATTTTACCGTG 58.376 40.909 0.00 0.00 40.44 4.94
1560 1633 0.792031 AACGATTTTACCGTGTCGCC 59.208 50.000 0.00 0.00 40.44 5.54
1594 1667 6.092807 GGTAGAACAACAGATCCTGTGAAATC 59.907 42.308 0.00 0.00 44.62 2.17
1595 1668 4.692625 AGAACAACAGATCCTGTGAAATCG 59.307 41.667 0.00 0.00 44.62 3.34
1597 1670 3.244561 ACAACAGATCCTGTGAAATCGGT 60.245 43.478 0.00 0.00 44.62 4.69
1598 1671 4.020573 ACAACAGATCCTGTGAAATCGGTA 60.021 41.667 0.00 0.00 44.62 4.02
1599 1672 4.124851 ACAGATCCTGTGAAATCGGTAC 57.875 45.455 0.00 0.00 43.63 3.34
1600 1673 3.118738 ACAGATCCTGTGAAATCGGTACC 60.119 47.826 0.16 0.16 43.63 3.34
1601 1674 3.104512 AGATCCTGTGAAATCGGTACCA 58.895 45.455 13.54 0.00 0.00 3.25
1602 1675 2.754946 TCCTGTGAAATCGGTACCAC 57.245 50.000 13.54 1.46 0.00 4.16
1603 1676 2.253610 TCCTGTGAAATCGGTACCACT 58.746 47.619 13.54 0.00 0.00 4.00
1604 1677 3.433343 TCCTGTGAAATCGGTACCACTA 58.567 45.455 13.54 0.00 0.00 2.74
1605 1678 3.833650 TCCTGTGAAATCGGTACCACTAA 59.166 43.478 13.54 0.00 0.00 2.24
1606 1679 4.283978 TCCTGTGAAATCGGTACCACTAAA 59.716 41.667 13.54 0.00 0.00 1.85
1607 1680 4.630069 CCTGTGAAATCGGTACCACTAAAG 59.370 45.833 13.54 0.00 0.00 1.85
1608 1681 4.571919 TGTGAAATCGGTACCACTAAAGG 58.428 43.478 13.54 0.00 0.00 3.11
1609 1682 3.373130 GTGAAATCGGTACCACTAAAGGC 59.627 47.826 13.54 0.00 0.00 4.35
1610 1683 2.704464 AATCGGTACCACTAAAGGCC 57.296 50.000 13.54 0.00 0.00 5.19
1611 1684 0.835276 ATCGGTACCACTAAAGGCCC 59.165 55.000 13.54 0.00 0.00 5.80
1612 1685 0.544833 TCGGTACCACTAAAGGCCCA 60.545 55.000 13.54 0.00 0.00 5.36
1613 1686 0.392060 CGGTACCACTAAAGGCCCAC 60.392 60.000 13.54 0.00 0.00 4.61
1614 1687 0.694196 GGTACCACTAAAGGCCCACA 59.306 55.000 7.15 0.00 0.00 4.17
1615 1688 1.283905 GGTACCACTAAAGGCCCACAT 59.716 52.381 7.15 0.00 0.00 3.21
1616 1689 2.365582 GTACCACTAAAGGCCCACATG 58.634 52.381 0.00 0.00 0.00 3.21
1617 1690 0.777446 ACCACTAAAGGCCCACATGT 59.223 50.000 0.00 0.00 0.00 3.21
1618 1691 1.271926 ACCACTAAAGGCCCACATGTC 60.272 52.381 0.00 0.00 0.00 3.06
1619 1692 1.271871 CCACTAAAGGCCCACATGTCA 60.272 52.381 0.00 0.00 0.00 3.58
1620 1693 2.086869 CACTAAAGGCCCACATGTCAG 58.913 52.381 0.00 0.00 0.00 3.51
1621 1694 1.705186 ACTAAAGGCCCACATGTCAGT 59.295 47.619 0.00 0.00 0.00 3.41
1622 1695 2.086869 CTAAAGGCCCACATGTCAGTG 58.913 52.381 0.00 0.00 39.21 3.66
1623 1696 0.185901 AAAGGCCCACATGTCAGTGT 59.814 50.000 0.00 0.00 37.82 3.55
1624 1697 0.185901 AAGGCCCACATGTCAGTGTT 59.814 50.000 0.00 0.00 37.82 3.32
1625 1698 0.250901 AGGCCCACATGTCAGTGTTC 60.251 55.000 0.00 0.00 37.82 3.18
1626 1699 0.250901 GGCCCACATGTCAGTGTTCT 60.251 55.000 0.00 0.00 37.82 3.01
1627 1700 1.609208 GCCCACATGTCAGTGTTCTT 58.391 50.000 0.00 0.00 37.82 2.52
1628 1701 1.956477 GCCCACATGTCAGTGTTCTTT 59.044 47.619 0.00 0.00 37.82 2.52
1629 1702 2.362077 GCCCACATGTCAGTGTTCTTTT 59.638 45.455 0.00 0.00 37.82 2.27
1630 1703 3.181476 GCCCACATGTCAGTGTTCTTTTT 60.181 43.478 0.00 0.00 37.82 1.94
1651 1724 5.607939 TTTTCTTTTTGGTCTTCTTCCCC 57.392 39.130 0.00 0.00 0.00 4.81
1652 1725 3.963476 TCTTTTTGGTCTTCTTCCCCA 57.037 42.857 0.00 0.00 0.00 4.96
1653 1726 3.562182 TCTTTTTGGTCTTCTTCCCCAC 58.438 45.455 0.00 0.00 0.00 4.61
1654 1727 2.375014 TTTTGGTCTTCTTCCCCACC 57.625 50.000 0.00 0.00 0.00 4.61
1655 1728 0.109723 TTTGGTCTTCTTCCCCACCG 59.890 55.000 0.00 0.00 0.00 4.94
1656 1729 0.765135 TTGGTCTTCTTCCCCACCGA 60.765 55.000 0.00 0.00 0.00 4.69
1657 1730 0.765135 TGGTCTTCTTCCCCACCGAA 60.765 55.000 0.00 0.00 0.00 4.30
1658 1731 0.618981 GGTCTTCTTCCCCACCGAAT 59.381 55.000 0.00 0.00 0.00 3.34
1659 1732 1.407025 GGTCTTCTTCCCCACCGAATC 60.407 57.143 0.00 0.00 0.00 2.52
1660 1733 0.535335 TCTTCTTCCCCACCGAATCG 59.465 55.000 0.00 0.00 0.00 3.34
1661 1734 0.535335 CTTCTTCCCCACCGAATCGA 59.465 55.000 3.36 0.00 0.00 3.59
1662 1735 0.248289 TTCTTCCCCACCGAATCGAC 59.752 55.000 3.36 0.00 0.00 4.20
1663 1736 0.901114 TCTTCCCCACCGAATCGACA 60.901 55.000 3.36 0.00 0.00 4.35
1664 1737 0.460284 CTTCCCCACCGAATCGACAG 60.460 60.000 3.36 0.00 0.00 3.51
1665 1738 1.895020 TTCCCCACCGAATCGACAGG 61.895 60.000 3.36 2.50 0.00 4.00
1666 1739 2.355986 CCCCACCGAATCGACAGGA 61.356 63.158 3.36 0.00 0.00 3.86
1667 1740 1.141881 CCCACCGAATCGACAGGAG 59.858 63.158 3.36 2.08 0.00 3.69
1668 1741 1.320344 CCCACCGAATCGACAGGAGA 61.320 60.000 3.36 0.00 0.00 3.71
1669 1742 0.179134 CCACCGAATCGACAGGAGAC 60.179 60.000 3.36 0.00 0.00 3.36
1670 1743 0.179134 CACCGAATCGACAGGAGACC 60.179 60.000 3.36 0.00 0.00 3.85
1671 1744 1.321074 ACCGAATCGACAGGAGACCC 61.321 60.000 3.36 0.00 0.00 4.46
1672 1745 1.437986 CGAATCGACAGGAGACCCC 59.562 63.158 0.00 0.00 0.00 4.95
1694 1767 4.320456 CCGACCAGCTGCCACACT 62.320 66.667 8.66 0.00 0.00 3.55
1695 1768 2.281070 CGACCAGCTGCCACACTT 60.281 61.111 8.66 0.00 0.00 3.16
1696 1769 2.320587 CGACCAGCTGCCACACTTC 61.321 63.158 8.66 0.00 0.00 3.01
1697 1770 2.281070 ACCAGCTGCCACACTTCG 60.281 61.111 8.66 0.00 0.00 3.79
1698 1771 3.730761 CCAGCTGCCACACTTCGC 61.731 66.667 8.66 0.00 0.00 4.70
1699 1772 3.730761 CAGCTGCCACACTTCGCC 61.731 66.667 0.00 0.00 0.00 5.54
1700 1773 3.946201 AGCTGCCACACTTCGCCT 61.946 61.111 0.00 0.00 0.00 5.52
1701 1774 2.980233 GCTGCCACACTTCGCCTT 60.980 61.111 0.00 0.00 0.00 4.35
1702 1775 2.970974 GCTGCCACACTTCGCCTTC 61.971 63.158 0.00 0.00 0.00 3.46
1703 1776 1.302033 CTGCCACACTTCGCCTTCT 60.302 57.895 0.00 0.00 0.00 2.85
1704 1777 1.294659 CTGCCACACTTCGCCTTCTC 61.295 60.000 0.00 0.00 0.00 2.87
1705 1778 2.035442 GCCACACTTCGCCTTCTCC 61.035 63.158 0.00 0.00 0.00 3.71
1706 1779 1.371183 CCACACTTCGCCTTCTCCA 59.629 57.895 0.00 0.00 0.00 3.86
1707 1780 0.671781 CCACACTTCGCCTTCTCCAG 60.672 60.000 0.00 0.00 0.00 3.86
1709 1782 1.122019 ACACTTCGCCTTCTCCAGGT 61.122 55.000 0.00 0.00 46.07 4.00
1710 1783 0.035458 CACTTCGCCTTCTCCAGGTT 59.965 55.000 0.00 0.00 46.07 3.50
1711 1784 0.321996 ACTTCGCCTTCTCCAGGTTC 59.678 55.000 0.00 0.00 46.07 3.62
1712 1785 0.737715 CTTCGCCTTCTCCAGGTTCG 60.738 60.000 0.00 0.00 46.07 3.95
1713 1786 2.125512 CGCCTTCTCCAGGTTCGG 60.126 66.667 0.00 0.00 46.07 4.30
1714 1787 2.943978 CGCCTTCTCCAGGTTCGGT 61.944 63.158 0.00 0.00 46.07 4.69
1715 1788 1.376037 GCCTTCTCCAGGTTCGGTG 60.376 63.158 0.00 0.00 46.07 4.94
1716 1789 1.296715 CCTTCTCCAGGTTCGGTGG 59.703 63.158 0.00 0.00 37.99 4.61
1717 1790 1.481056 CCTTCTCCAGGTTCGGTGGT 61.481 60.000 0.00 0.00 37.99 4.16
1718 1791 0.320771 CTTCTCCAGGTTCGGTGGTG 60.321 60.000 0.00 0.00 36.37 4.17
1719 1792 2.358737 CTCCAGGTTCGGTGGTGC 60.359 66.667 0.00 0.00 36.37 5.01
1720 1793 3.901797 CTCCAGGTTCGGTGGTGCC 62.902 68.421 0.00 0.00 36.37 5.01
1721 1794 3.953775 CCAGGTTCGGTGGTGCCT 61.954 66.667 0.00 0.00 34.25 4.75
1722 1795 2.669569 CAGGTTCGGTGGTGCCTG 60.670 66.667 0.00 0.00 41.89 4.85
1723 1796 2.847234 AGGTTCGGTGGTGCCTGA 60.847 61.111 0.00 0.00 34.25 3.86
1724 1797 2.668550 GGTTCGGTGGTGCCTGAC 60.669 66.667 0.00 0.00 34.25 3.51
1725 1798 3.041940 GTTCGGTGGTGCCTGACG 61.042 66.667 0.00 0.00 34.25 4.35
1726 1799 3.228017 TTCGGTGGTGCCTGACGA 61.228 61.111 0.00 0.00 34.25 4.20
1727 1800 3.220999 TTCGGTGGTGCCTGACGAG 62.221 63.158 0.00 0.00 34.85 4.18
1839 1912 1.153529 CACGCGGCCAGTGGTTATA 60.154 57.895 17.88 0.00 36.06 0.98
1880 1953 1.885850 GCCCGGCCATGTACTAACG 60.886 63.158 2.24 0.00 0.00 3.18
1892 1967 1.818959 TACTAACGCCGTGGCCTGTT 61.819 55.000 3.32 7.30 37.98 3.16
1905 1980 3.175240 CTGTTCGAGCAGCCGTCG 61.175 66.667 16.60 0.00 38.84 5.12
1908 1983 3.362797 TTCGAGCAGCCGTCGTCT 61.363 61.111 4.16 0.00 38.60 4.18
2068 2143 0.958382 CTTGGTGGAATTTCGCCGGA 60.958 55.000 5.05 2.22 40.02 5.14
2069 2144 1.238625 TTGGTGGAATTTCGCCGGAC 61.239 55.000 5.05 0.00 40.02 4.79
2070 2145 1.376812 GGTGGAATTTCGCCGGACT 60.377 57.895 5.05 0.00 0.00 3.85
2071 2146 1.366854 GGTGGAATTTCGCCGGACTC 61.367 60.000 5.05 0.00 0.00 3.36
2114 2189 3.096092 GGTGATGGTTGGGCTGAAATTA 58.904 45.455 0.00 0.00 0.00 1.40
2115 2190 3.513515 GGTGATGGTTGGGCTGAAATTAA 59.486 43.478 0.00 0.00 0.00 1.40
2116 2191 4.162131 GGTGATGGTTGGGCTGAAATTAAT 59.838 41.667 0.00 0.00 0.00 1.40
2177 2295 5.530176 TTAGGGGGAGCTCAATAAACTTT 57.470 39.130 17.19 0.00 0.00 2.66
2178 2296 6.645884 TTAGGGGGAGCTCAATAAACTTTA 57.354 37.500 17.19 0.00 0.00 1.85
2265 2385 7.913674 TTTTTGTTACAGTTTCATGCCTTTT 57.086 28.000 0.00 0.00 0.00 2.27
2267 2387 9.606631 TTTTTGTTACAGTTTCATGCCTTTTAT 57.393 25.926 0.00 0.00 0.00 1.40
2268 2388 8.586570 TTTGTTACAGTTTCATGCCTTTTATG 57.413 30.769 0.00 0.00 0.00 1.90
2269 2389 7.517614 TGTTACAGTTTCATGCCTTTTATGA 57.482 32.000 0.00 0.00 33.00 2.15
2270 2390 7.592938 TGTTACAGTTTCATGCCTTTTATGAG 58.407 34.615 0.00 0.00 36.07 2.90
2271 2391 7.446931 TGTTACAGTTTCATGCCTTTTATGAGA 59.553 33.333 0.00 0.00 36.07 3.27
2272 2392 8.462016 GTTACAGTTTCATGCCTTTTATGAGAT 58.538 33.333 0.00 0.00 36.07 2.75
2273 2393 7.093322 ACAGTTTCATGCCTTTTATGAGATC 57.907 36.000 0.00 0.00 36.07 2.75
2274 2394 6.888632 ACAGTTTCATGCCTTTTATGAGATCT 59.111 34.615 0.00 0.00 36.07 2.75
2275 2395 7.148120 ACAGTTTCATGCCTTTTATGAGATCTG 60.148 37.037 0.00 0.00 36.07 2.90
2276 2396 5.762825 TTCATGCCTTTTATGAGATCTGC 57.237 39.130 0.00 0.00 36.07 4.26
2277 2397 5.045012 TCATGCCTTTTATGAGATCTGCT 57.955 39.130 0.00 0.00 31.35 4.24
2278 2398 6.178607 TCATGCCTTTTATGAGATCTGCTA 57.821 37.500 0.00 0.00 31.35 3.49
2279 2399 6.228995 TCATGCCTTTTATGAGATCTGCTAG 58.771 40.000 0.00 0.00 31.35 3.42
2280 2400 5.876651 TGCCTTTTATGAGATCTGCTAGA 57.123 39.130 0.00 0.00 0.00 2.43
2281 2401 5.851720 TGCCTTTTATGAGATCTGCTAGAG 58.148 41.667 0.00 0.00 0.00 2.43
2282 2402 5.600069 TGCCTTTTATGAGATCTGCTAGAGA 59.400 40.000 0.00 0.00 34.25 3.10
2283 2403 6.269538 TGCCTTTTATGAGATCTGCTAGAGAT 59.730 38.462 0.00 0.00 44.78 2.75
2284 2404 6.591062 GCCTTTTATGAGATCTGCTAGAGATG 59.409 42.308 0.00 0.00 41.91 2.90
2285 2405 6.591062 CCTTTTATGAGATCTGCTAGAGATGC 59.409 42.308 0.00 0.00 41.91 3.91
2286 2406 6.914654 TTTATGAGATCTGCTAGAGATGCT 57.085 37.500 0.00 6.63 41.91 3.79
2287 2407 6.513806 TTATGAGATCTGCTAGAGATGCTC 57.486 41.667 0.00 12.74 41.91 4.26
2288 2408 3.156293 TGAGATCTGCTAGAGATGCTCC 58.844 50.000 0.00 0.00 41.91 4.70
2289 2409 3.156293 GAGATCTGCTAGAGATGCTCCA 58.844 50.000 0.00 0.00 41.91 3.86
2290 2410 3.573538 GAGATCTGCTAGAGATGCTCCAA 59.426 47.826 0.00 0.00 41.91 3.53
2291 2411 3.575256 AGATCTGCTAGAGATGCTCCAAG 59.425 47.826 0.00 0.00 41.91 3.61
2292 2412 2.744760 TCTGCTAGAGATGCTCCAAGT 58.255 47.619 0.00 0.00 0.00 3.16
2293 2413 2.692557 TCTGCTAGAGATGCTCCAAGTC 59.307 50.000 0.00 0.00 0.00 3.01
2294 2414 2.694628 CTGCTAGAGATGCTCCAAGTCT 59.305 50.000 0.00 0.00 0.00 3.24
2295 2415 2.692557 TGCTAGAGATGCTCCAAGTCTC 59.307 50.000 0.00 0.00 38.88 3.36
2296 2416 2.287547 GCTAGAGATGCTCCAAGTCTCG 60.288 54.545 0.00 0.00 42.40 4.04
2297 2417 1.110442 AGAGATGCTCCAAGTCTCGG 58.890 55.000 0.00 0.00 42.40 4.63
2298 2418 1.107114 GAGATGCTCCAAGTCTCGGA 58.893 55.000 0.00 0.00 30.26 4.55
2299 2419 1.478510 GAGATGCTCCAAGTCTCGGAA 59.521 52.381 0.00 0.00 30.33 4.30
2300 2420 1.902508 AGATGCTCCAAGTCTCGGAAA 59.097 47.619 0.00 0.00 30.33 3.13
2301 2421 2.303022 AGATGCTCCAAGTCTCGGAAAA 59.697 45.455 0.00 0.00 30.33 2.29
2302 2422 2.859165 TGCTCCAAGTCTCGGAAAAT 57.141 45.000 0.00 0.00 30.33 1.82
2303 2423 2.699954 TGCTCCAAGTCTCGGAAAATC 58.300 47.619 0.00 0.00 30.33 2.17
2304 2424 2.303022 TGCTCCAAGTCTCGGAAAATCT 59.697 45.455 0.00 0.00 30.33 2.40
2305 2425 2.933260 GCTCCAAGTCTCGGAAAATCTC 59.067 50.000 0.00 0.00 30.33 2.75
2306 2426 3.368948 GCTCCAAGTCTCGGAAAATCTCT 60.369 47.826 0.00 0.00 30.33 3.10
2307 2427 4.826556 CTCCAAGTCTCGGAAAATCTCTT 58.173 43.478 0.00 0.00 30.33 2.85
2308 2428 4.822026 TCCAAGTCTCGGAAAATCTCTTC 58.178 43.478 0.00 0.00 0.00 2.87
2309 2429 3.935828 CCAAGTCTCGGAAAATCTCTTCC 59.064 47.826 0.00 0.00 41.40 3.46
2316 2436 3.611766 GGAAAATCTCTTCCGACCAGA 57.388 47.619 0.00 0.00 35.79 3.86
2317 2437 3.939066 GGAAAATCTCTTCCGACCAGAA 58.061 45.455 0.00 0.00 35.79 3.02
2318 2438 3.685272 GGAAAATCTCTTCCGACCAGAAC 59.315 47.826 0.00 0.00 35.79 3.01
2319 2439 4.315803 GAAAATCTCTTCCGACCAGAACA 58.684 43.478 0.00 0.00 0.00 3.18
2320 2440 4.559862 AAATCTCTTCCGACCAGAACAT 57.440 40.909 0.00 0.00 0.00 2.71
2321 2441 3.810310 ATCTCTTCCGACCAGAACATC 57.190 47.619 0.00 0.00 0.00 3.06
2322 2442 1.825474 TCTCTTCCGACCAGAACATCC 59.175 52.381 0.00 0.00 0.00 3.51
2323 2443 0.902531 TCTTCCGACCAGAACATCCC 59.097 55.000 0.00 0.00 0.00 3.85
2324 2444 0.905357 CTTCCGACCAGAACATCCCT 59.095 55.000 0.00 0.00 0.00 4.20
2325 2445 2.108168 CTTCCGACCAGAACATCCCTA 58.892 52.381 0.00 0.00 0.00 3.53
2326 2446 1.776662 TCCGACCAGAACATCCCTAG 58.223 55.000 0.00 0.00 0.00 3.02
2327 2447 1.286849 TCCGACCAGAACATCCCTAGA 59.713 52.381 0.00 0.00 0.00 2.43
2328 2448 2.091278 TCCGACCAGAACATCCCTAGAT 60.091 50.000 0.00 0.00 0.00 1.98
2341 2461 6.025749 CATCCCTAGATGTAGCGTTATTCA 57.974 41.667 0.00 0.00 44.22 2.57
2342 2462 6.634805 CATCCCTAGATGTAGCGTTATTCAT 58.365 40.000 0.00 0.00 44.22 2.57
2343 2463 7.772166 CATCCCTAGATGTAGCGTTATTCATA 58.228 38.462 0.00 0.00 44.22 2.15
2344 2464 7.956328 TCCCTAGATGTAGCGTTATTCATAT 57.044 36.000 0.00 0.00 0.00 1.78
2345 2465 8.362464 TCCCTAGATGTAGCGTTATTCATATT 57.638 34.615 0.00 0.00 0.00 1.28
2346 2466 8.467598 TCCCTAGATGTAGCGTTATTCATATTC 58.532 37.037 0.00 0.00 0.00 1.75
2347 2467 8.251026 CCCTAGATGTAGCGTTATTCATATTCA 58.749 37.037 0.00 0.00 0.00 2.57
2348 2468 9.809096 CCTAGATGTAGCGTTATTCATATTCAT 57.191 33.333 0.00 0.00 0.00 2.57
2354 2474 8.556194 TGTAGCGTTATTCATATTCATTTCACC 58.444 33.333 0.00 0.00 0.00 4.02
2355 2475 6.970484 AGCGTTATTCATATTCATTTCACCC 58.030 36.000 0.00 0.00 0.00 4.61
2356 2476 6.016276 AGCGTTATTCATATTCATTTCACCCC 60.016 38.462 0.00 0.00 0.00 4.95
2357 2477 6.016276 GCGTTATTCATATTCATTTCACCCCT 60.016 38.462 0.00 0.00 0.00 4.79
2358 2478 7.362662 CGTTATTCATATTCATTTCACCCCTG 58.637 38.462 0.00 0.00 0.00 4.45
2359 2479 5.796424 ATTCATATTCATTTCACCCCTGC 57.204 39.130 0.00 0.00 0.00 4.85
2360 2480 4.524802 TCATATTCATTTCACCCCTGCT 57.475 40.909 0.00 0.00 0.00 4.24
2361 2481 4.464008 TCATATTCATTTCACCCCTGCTC 58.536 43.478 0.00 0.00 0.00 4.26
2362 2482 2.149973 ATTCATTTCACCCCTGCTCC 57.850 50.000 0.00 0.00 0.00 4.70
2363 2483 1.075601 TTCATTTCACCCCTGCTCCT 58.924 50.000 0.00 0.00 0.00 3.69
2364 2484 1.965414 TCATTTCACCCCTGCTCCTA 58.035 50.000 0.00 0.00 0.00 2.94
2365 2485 1.559682 TCATTTCACCCCTGCTCCTAC 59.440 52.381 0.00 0.00 0.00 3.18
2366 2486 1.281867 CATTTCACCCCTGCTCCTACA 59.718 52.381 0.00 0.00 0.00 2.74
2367 2487 1.668826 TTTCACCCCTGCTCCTACAT 58.331 50.000 0.00 0.00 0.00 2.29
2368 2488 1.668826 TTCACCCCTGCTCCTACATT 58.331 50.000 0.00 0.00 0.00 2.71
2369 2489 1.668826 TCACCCCTGCTCCTACATTT 58.331 50.000 0.00 0.00 0.00 2.32
2370 2490 2.840511 TCACCCCTGCTCCTACATTTA 58.159 47.619 0.00 0.00 0.00 1.40
2371 2491 2.504175 TCACCCCTGCTCCTACATTTAC 59.496 50.000 0.00 0.00 0.00 2.01
2372 2492 2.505819 CACCCCTGCTCCTACATTTACT 59.494 50.000 0.00 0.00 0.00 2.24
2373 2493 3.709653 CACCCCTGCTCCTACATTTACTA 59.290 47.826 0.00 0.00 0.00 1.82
2374 2494 3.967987 ACCCCTGCTCCTACATTTACTAG 59.032 47.826 0.00 0.00 0.00 2.57
2375 2495 4.223953 CCCCTGCTCCTACATTTACTAGA 58.776 47.826 0.00 0.00 0.00 2.43
2376 2496 4.654262 CCCCTGCTCCTACATTTACTAGAA 59.346 45.833 0.00 0.00 0.00 2.10
2377 2497 5.221541 CCCCTGCTCCTACATTTACTAGAAG 60.222 48.000 0.00 0.00 0.00 2.85
2378 2498 5.598830 CCCTGCTCCTACATTTACTAGAAGA 59.401 44.000 0.00 0.00 0.00 2.87
2379 2499 6.098409 CCCTGCTCCTACATTTACTAGAAGAA 59.902 42.308 0.00 0.00 0.00 2.52
2380 2500 6.981559 CCTGCTCCTACATTTACTAGAAGAAC 59.018 42.308 0.00 0.00 0.00 3.01
2381 2501 6.561614 TGCTCCTACATTTACTAGAAGAACG 58.438 40.000 0.00 0.00 0.00 3.95
2382 2502 5.459434 GCTCCTACATTTACTAGAAGAACGC 59.541 44.000 0.00 0.00 0.00 4.84
2383 2503 5.899299 TCCTACATTTACTAGAAGAACGCC 58.101 41.667 0.00 0.00 0.00 5.68
2384 2504 4.738740 CCTACATTTACTAGAAGAACGCCG 59.261 45.833 0.00 0.00 0.00 6.46
2385 2505 4.184079 ACATTTACTAGAAGAACGCCGT 57.816 40.909 0.00 0.00 0.00 5.68
2386 2506 3.924686 ACATTTACTAGAAGAACGCCGTG 59.075 43.478 0.00 0.00 0.00 4.94
2387 2507 1.986698 TTACTAGAAGAACGCCGTGC 58.013 50.000 0.00 0.00 0.00 5.34
2388 2508 0.883153 TACTAGAAGAACGCCGTGCA 59.117 50.000 0.00 0.00 0.00 4.57
2389 2509 0.246635 ACTAGAAGAACGCCGTGCAT 59.753 50.000 0.00 0.00 0.00 3.96
2390 2510 1.337823 ACTAGAAGAACGCCGTGCATT 60.338 47.619 0.00 0.00 0.00 3.56
2391 2511 1.061131 CTAGAAGAACGCCGTGCATTG 59.939 52.381 0.00 0.00 0.00 2.82
2392 2512 1.797537 GAAGAACGCCGTGCATTGC 60.798 57.895 0.00 0.46 0.00 3.56
2393 2513 2.456594 GAAGAACGCCGTGCATTGCA 62.457 55.000 7.38 7.38 35.60 4.08
2394 2514 2.050533 GAACGCCGTGCATTGCAA 60.051 55.556 13.94 0.00 41.47 4.08
2395 2515 2.354539 AACGCCGTGCATTGCAAC 60.355 55.556 13.94 7.00 41.47 4.17
2396 2516 4.681643 ACGCCGTGCATTGCAACG 62.682 61.111 21.36 21.36 41.47 4.10
2404 2524 4.340019 CATTGCAACGCGGCCACA 62.340 61.111 12.47 0.00 0.00 4.17
2405 2525 3.372730 ATTGCAACGCGGCCACAT 61.373 55.556 12.47 0.00 0.00 3.21
2406 2526 2.929903 ATTGCAACGCGGCCACATT 61.930 52.632 12.47 0.00 0.00 2.71
2407 2527 1.590610 ATTGCAACGCGGCCACATTA 61.591 50.000 12.47 0.00 0.00 1.90
2408 2528 1.796190 TTGCAACGCGGCCACATTAA 61.796 50.000 12.47 0.00 0.00 1.40
2409 2529 1.799916 GCAACGCGGCCACATTAAC 60.800 57.895 12.47 0.00 0.00 2.01
2410 2530 1.873165 CAACGCGGCCACATTAACT 59.127 52.632 12.47 0.00 0.00 2.24
2411 2531 0.239879 CAACGCGGCCACATTAACTT 59.760 50.000 12.47 0.00 0.00 2.66
2412 2532 0.955905 AACGCGGCCACATTAACTTT 59.044 45.000 12.47 0.00 0.00 2.66
2413 2533 1.810959 ACGCGGCCACATTAACTTTA 58.189 45.000 12.47 0.00 0.00 1.85
2414 2534 2.152830 ACGCGGCCACATTAACTTTAA 58.847 42.857 12.47 0.00 0.00 1.52
2415 2535 2.160813 ACGCGGCCACATTAACTTTAAG 59.839 45.455 12.47 0.00 0.00 1.85
2416 2536 2.417239 CGCGGCCACATTAACTTTAAGA 59.583 45.455 2.24 0.00 0.00 2.10
2417 2537 3.485216 CGCGGCCACATTAACTTTAAGAG 60.485 47.826 2.24 0.00 0.00 2.85
2418 2538 3.439129 GCGGCCACATTAACTTTAAGAGT 59.561 43.478 2.24 0.00 41.47 3.24
2420 2540 5.628134 CGGCCACATTAACTTTAAGAGTTC 58.372 41.667 2.24 0.00 45.40 3.01
2421 2541 5.180492 CGGCCACATTAACTTTAAGAGTTCA 59.820 40.000 2.24 0.00 45.40 3.18
2422 2542 6.293735 CGGCCACATTAACTTTAAGAGTTCAA 60.294 38.462 2.24 2.81 45.40 2.69
2423 2543 7.574967 CGGCCACATTAACTTTAAGAGTTCAAT 60.575 37.037 2.24 4.32 45.40 2.57
2424 2544 8.736244 GGCCACATTAACTTTAAGAGTTCAATA 58.264 33.333 0.00 0.00 45.40 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.176619 TGCTGCAGCTGCTTGTGAAT 61.177 50.000 36.61 0.00 42.66 2.57
1 2 1.792118 CTGCTGCAGCTGCTTGTGAA 61.792 55.000 36.61 16.65 42.66 3.18
2 3 2.203238 TGCTGCAGCTGCTTGTGA 60.203 55.556 36.61 17.40 42.66 3.58
3 4 1.792118 TTCTGCTGCAGCTGCTTGTG 61.792 55.000 36.61 24.01 42.66 3.33
4 5 1.527611 TTCTGCTGCAGCTGCTTGT 60.528 52.632 36.61 0.00 42.66 3.16
5 6 1.081376 GTTCTGCTGCAGCTGCTTG 60.081 57.895 36.61 28.54 42.66 4.01
6 7 1.228184 AGTTCTGCTGCAGCTGCTT 60.228 52.632 36.61 21.47 42.66 3.91
7 8 1.671704 GAGTTCTGCTGCAGCTGCT 60.672 57.895 36.61 27.63 42.66 4.24
8 9 2.688794 GGAGTTCTGCTGCAGCTGC 61.689 63.158 36.61 31.89 42.66 5.25
9 10 1.302271 TGGAGTTCTGCTGCAGCTG 60.302 57.895 36.61 34.64 40.73 4.24
10 11 1.302351 GTGGAGTTCTGCTGCAGCT 60.302 57.895 36.61 18.73 46.25 4.24
11 12 2.675056 CGTGGAGTTCTGCTGCAGC 61.675 63.158 31.89 31.89 46.25 5.25
12 13 2.031516 CCGTGGAGTTCTGCTGCAG 61.032 63.158 23.31 23.31 46.25 4.41
13 14 2.031012 CCGTGGAGTTCTGCTGCA 59.969 61.111 0.88 0.88 43.44 4.41
14 15 2.031163 ACCGTGGAGTTCTGCTGC 59.969 61.111 0.00 0.00 35.97 5.25
15 16 0.036952 ATCACCGTGGAGTTCTGCTG 60.037 55.000 0.00 0.00 0.00 4.41
16 17 0.036952 CATCACCGTGGAGTTCTGCT 60.037 55.000 0.00 0.00 0.00 4.24
17 18 1.639298 GCATCACCGTGGAGTTCTGC 61.639 60.000 0.00 0.00 0.00 4.26
18 19 0.036952 AGCATCACCGTGGAGTTCTG 60.037 55.000 0.00 0.00 0.00 3.02
19 20 1.478510 CTAGCATCACCGTGGAGTTCT 59.521 52.381 0.00 0.00 0.00 3.01
20 21 1.927895 CTAGCATCACCGTGGAGTTC 58.072 55.000 0.00 0.00 0.00 3.01
21 22 0.108138 GCTAGCATCACCGTGGAGTT 60.108 55.000 10.63 0.00 0.00 3.01
22 23 1.257750 TGCTAGCATCACCGTGGAGT 61.258 55.000 14.93 0.00 0.00 3.85
84 85 5.018149 AGGAGGTTAAGAGTCTAGTGGAAC 58.982 45.833 0.00 0.00 0.00 3.62
88 89 4.601084 TCCAGGAGGTTAAGAGTCTAGTG 58.399 47.826 0.00 0.00 35.89 2.74
89 90 4.949966 TCCAGGAGGTTAAGAGTCTAGT 57.050 45.455 0.00 0.00 35.89 2.57
92 93 4.405756 TCTTCCAGGAGGTTAAGAGTCT 57.594 45.455 0.00 0.00 35.89 3.24
98 99 6.581388 ATCATCAATCTTCCAGGAGGTTAA 57.419 37.500 0.00 0.00 35.89 2.01
101 102 4.141298 GGAATCATCAATCTTCCAGGAGGT 60.141 45.833 0.00 0.00 38.64 3.85
106 107 4.141321 TGGAGGGAATCATCAATCTTCCAG 60.141 45.833 3.24 0.00 40.20 3.86
141 142 1.202830 TGCAAGTAACACCGGACCAAT 60.203 47.619 9.46 0.00 0.00 3.16
199 200 0.031585 CGTCAAGGTGGAACGACTGA 59.968 55.000 0.00 0.00 38.12 3.41
200 201 0.944311 CCGTCAAGGTGGAACGACTG 60.944 60.000 0.00 0.00 38.12 3.51
206 207 0.178975 ATTTGGCCGTCAAGGTGGAA 60.179 50.000 0.00 0.00 43.70 3.53
217 218 0.679640 TGCAAGGAGGTATTTGGCCG 60.680 55.000 0.00 0.00 0.00 6.13
238 239 2.266554 GTGAGGAGACTGAGATTTGCG 58.733 52.381 0.00 0.00 44.43 4.85
249 250 2.569404 AGGTGGATTCTTGTGAGGAGAC 59.431 50.000 0.00 0.00 0.00 3.36
304 305 2.554032 CCTACTCAGTTGGCCAAGTTTG 59.446 50.000 23.63 19.44 0.00 2.93
305 306 2.863809 CCTACTCAGTTGGCCAAGTTT 58.136 47.619 23.63 12.83 0.00 2.66
326 327 5.657474 TGAGTTAAGGTTAAGATACCGCAG 58.343 41.667 0.00 0.00 43.21 5.18
343 344 9.826574 ATTACACCGCTAAGATTATTTGAGTTA 57.173 29.630 0.00 0.00 0.00 2.24
345 346 7.441458 GGATTACACCGCTAAGATTATTTGAGT 59.559 37.037 0.00 0.00 0.00 3.41
352 353 5.607477 CTTGGGATTACACCGCTAAGATTA 58.393 41.667 0.00 0.00 0.00 1.75
364 365 5.934043 CGATGATAGATTGCTTGGGATTACA 59.066 40.000 0.00 0.00 0.00 2.41
365 366 5.934625 ACGATGATAGATTGCTTGGGATTAC 59.065 40.000 0.00 0.00 0.00 1.89
367 368 4.758674 CACGATGATAGATTGCTTGGGATT 59.241 41.667 0.00 0.00 0.00 3.01
385 386 4.442375 AACTCGAAGATGAGAACACGAT 57.558 40.909 0.00 0.00 39.35 3.73
388 389 7.704472 AGATCAATAACTCGAAGATGAGAACAC 59.296 37.037 0.00 0.00 39.35 3.32
397 398 5.163405 CCTCCCAAGATCAATAACTCGAAGA 60.163 44.000 0.00 0.00 0.00 2.87
406 407 3.849574 TGGTGTTCCTCCCAAGATCAATA 59.150 43.478 0.00 0.00 34.23 1.90
421 422 2.511600 CCTCCGGCGATGGTGTTC 60.512 66.667 9.30 0.00 0.00 3.18
433 506 2.066393 TCCTTCTGGGATGCCTCCG 61.066 63.158 4.35 0.00 43.11 4.63
451 524 0.893727 GGTTGCGAAGTGTCCCCAAT 60.894 55.000 0.00 0.00 0.00 3.16
488 561 2.280628 GCCCGTCAGAGTATTTCCAAG 58.719 52.381 0.00 0.00 0.00 3.61
489 562 1.626321 TGCCCGTCAGAGTATTTCCAA 59.374 47.619 0.00 0.00 0.00 3.53
545 618 4.002906 TGTTGGCGAGATAAACAGAGTT 57.997 40.909 0.00 0.00 30.62 3.01
560 633 3.003480 GTCCTGTGAGACTATTGTTGGC 58.997 50.000 0.00 0.00 33.79 4.52
571 644 3.515059 CGGGATAGGTCCTGTGAGA 57.485 57.895 0.00 0.00 44.55 3.27
590 663 5.472137 GTGATGAACTACTAGCTAGGAGAGG 59.528 48.000 35.12 14.00 36.31 3.69
603 676 8.299570 AGACCAAAAATTGATGTGATGAACTAC 58.700 33.333 0.00 0.00 0.00 2.73
615 688 4.141528 TGTTGCCCAAGACCAAAAATTGAT 60.142 37.500 0.00 0.00 0.00 2.57
633 706 1.474077 CTCCACCAAGGCTATTGTTGC 59.526 52.381 0.00 0.00 37.29 4.17
642 715 3.485764 GGAATCTCTCCACCAAGGC 57.514 57.895 0.00 0.00 44.67 4.35
680 753 5.366768 CCAGGGATAAGACTTGGAGTAATGA 59.633 44.000 0.00 0.00 0.00 2.57
684 757 3.039011 GCCAGGGATAAGACTTGGAGTA 58.961 50.000 0.00 0.00 0.00 2.59
734 807 9.554395 TGAGTCAACAATATTGTAGAAAACAGA 57.446 29.630 21.07 7.05 41.31 3.41
743 816 6.774673 TCAAGGGTGAGTCAACAATATTGTA 58.225 36.000 21.07 4.21 41.31 2.41
744 817 5.630121 TCAAGGGTGAGTCAACAATATTGT 58.370 37.500 15.47 15.47 44.72 2.71
781 854 5.361571 TGTGCCTGCAAGATTATTTGATGAT 59.638 36.000 0.00 0.00 34.07 2.45
782 855 4.705991 TGTGCCTGCAAGATTATTTGATGA 59.294 37.500 0.00 0.00 34.07 2.92
829 902 0.695347 AGAGCCAGGAAAGGGAAGTG 59.305 55.000 0.00 0.00 0.00 3.16
830 903 0.988063 GAGAGCCAGGAAAGGGAAGT 59.012 55.000 0.00 0.00 0.00 3.01
840 913 1.110442 ATGTTCGAGAGAGAGCCAGG 58.890 55.000 0.00 0.00 43.69 4.45
849 922 4.083217 CGGAGGGAGTATTATGTTCGAGAG 60.083 50.000 0.00 0.00 0.00 3.20
850 923 3.819337 CGGAGGGAGTATTATGTTCGAGA 59.181 47.826 0.00 0.00 0.00 4.04
853 926 4.296690 GAACGGAGGGAGTATTATGTTCG 58.703 47.826 0.00 0.00 0.00 3.95
855 928 3.069158 CCGAACGGAGGGAGTATTATGTT 59.931 47.826 7.53 0.00 37.50 2.71
859 932 2.734755 TCCGAACGGAGGGAGTATTA 57.265 50.000 12.04 0.00 39.76 0.98
862 935 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
863 936 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
864 937 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
865 938 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
866 939 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
867 940 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
868 941 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
869 942 1.133025 GGACGAGTAATTCCGAACGGA 59.867 52.381 12.04 12.04 43.52 4.69
870 943 1.135315 TGGACGAGTAATTCCGAACGG 60.135 52.381 6.94 6.94 0.00 4.44
871 944 2.182825 CTGGACGAGTAATTCCGAACG 58.817 52.381 0.00 0.00 0.00 3.95
872 945 2.165030 TCCTGGACGAGTAATTCCGAAC 59.835 50.000 0.00 0.00 0.00 3.95
873 946 2.449464 TCCTGGACGAGTAATTCCGAA 58.551 47.619 0.00 0.00 0.00 4.30
874 947 2.133281 TCCTGGACGAGTAATTCCGA 57.867 50.000 0.00 0.00 0.00 4.55
875 948 2.953466 TTCCTGGACGAGTAATTCCG 57.047 50.000 0.00 0.00 0.00 4.30
876 949 4.766375 TCATTTCCTGGACGAGTAATTCC 58.234 43.478 0.00 0.00 0.00 3.01
877 950 6.316390 ACATTCATTTCCTGGACGAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
878 951 6.180472 ACATTCATTTCCTGGACGAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
879 952 5.745227 ACATTCATTTCCTGGACGAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
880 953 5.160607 ACATTCATTTCCTGGACGAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
881 954 4.819105 ACATTCATTTCCTGGACGAGTA 57.181 40.909 0.00 0.00 0.00 2.59
882 955 3.703001 ACATTCATTTCCTGGACGAGT 57.297 42.857 0.00 0.00 0.00 4.18
883 956 6.683974 AAATACATTCATTTCCTGGACGAG 57.316 37.500 0.00 0.00 0.00 4.18
884 957 6.765989 CCTAAATACATTCATTTCCTGGACGA 59.234 38.462 0.00 0.00 30.84 4.20
885 958 6.542370 ACCTAAATACATTCATTTCCTGGACG 59.458 38.462 0.00 0.00 30.84 4.79
886 959 7.339466 ACACCTAAATACATTCATTTCCTGGAC 59.661 37.037 0.00 0.00 30.84 4.02
887 960 7.410174 ACACCTAAATACATTCATTTCCTGGA 58.590 34.615 0.00 0.00 30.84 3.86
888 961 7.645058 ACACCTAAATACATTCATTTCCTGG 57.355 36.000 0.00 0.00 30.84 4.45
930 1003 9.743057 TCGAAATTACTTGTCACAAAAATGAAT 57.257 25.926 0.00 0.00 0.00 2.57
931 1004 9.574458 TTCGAAATTACTTGTCACAAAAATGAA 57.426 25.926 0.00 0.00 0.00 2.57
932 1005 9.015577 GTTCGAAATTACTTGTCACAAAAATGA 57.984 29.630 0.00 0.00 0.00 2.57
933 1006 7.990499 CGTTCGAAATTACTTGTCACAAAAATG 59.010 33.333 0.00 0.00 0.00 2.32
934 1007 7.911205 TCGTTCGAAATTACTTGTCACAAAAAT 59.089 29.630 0.00 0.00 0.00 1.82
935 1008 7.242079 TCGTTCGAAATTACTTGTCACAAAAA 58.758 30.769 0.00 0.00 0.00 1.94
936 1009 6.773080 TCGTTCGAAATTACTTGTCACAAAA 58.227 32.000 0.00 0.00 0.00 2.44
937 1010 6.347270 TCGTTCGAAATTACTTGTCACAAA 57.653 33.333 0.00 0.00 0.00 2.83
938 1011 5.970140 TCGTTCGAAATTACTTGTCACAA 57.030 34.783 0.00 0.00 0.00 3.33
939 1012 5.050634 CCTTCGTTCGAAATTACTTGTCACA 60.051 40.000 0.00 0.00 0.00 3.58
940 1013 5.371629 CCTTCGTTCGAAATTACTTGTCAC 58.628 41.667 0.00 0.00 0.00 3.67
941 1014 4.449743 CCCTTCGTTCGAAATTACTTGTCA 59.550 41.667 0.00 0.00 0.00 3.58
942 1015 4.142966 CCCCTTCGTTCGAAATTACTTGTC 60.143 45.833 0.00 0.00 0.00 3.18
943 1016 3.749609 CCCCTTCGTTCGAAATTACTTGT 59.250 43.478 0.00 0.00 0.00 3.16
944 1017 3.749609 ACCCCTTCGTTCGAAATTACTTG 59.250 43.478 0.00 0.00 0.00 3.16
945 1018 4.011966 ACCCCTTCGTTCGAAATTACTT 57.988 40.909 0.00 0.00 0.00 2.24
946 1019 3.690475 ACCCCTTCGTTCGAAATTACT 57.310 42.857 0.00 0.00 0.00 2.24
947 1020 4.498241 ACTACCCCTTCGTTCGAAATTAC 58.502 43.478 0.00 0.00 0.00 1.89
948 1021 4.806640 ACTACCCCTTCGTTCGAAATTA 57.193 40.909 0.00 0.00 0.00 1.40
949 1022 3.690475 ACTACCCCTTCGTTCGAAATT 57.310 42.857 0.00 0.00 0.00 1.82
950 1023 3.690475 AACTACCCCTTCGTTCGAAAT 57.310 42.857 0.00 0.00 0.00 2.17
951 1024 3.473923 AAACTACCCCTTCGTTCGAAA 57.526 42.857 0.00 0.00 0.00 3.46
952 1025 3.181467 TGAAAACTACCCCTTCGTTCGAA 60.181 43.478 7.40 7.40 0.00 3.71
953 1026 2.364970 TGAAAACTACCCCTTCGTTCGA 59.635 45.455 0.00 0.00 0.00 3.71
954 1027 2.758009 TGAAAACTACCCCTTCGTTCG 58.242 47.619 0.00 0.00 0.00 3.95
955 1028 3.501062 CCTTGAAAACTACCCCTTCGTTC 59.499 47.826 0.00 0.00 0.00 3.95
956 1029 3.117776 ACCTTGAAAACTACCCCTTCGTT 60.118 43.478 0.00 0.00 0.00 3.85
957 1030 2.440627 ACCTTGAAAACTACCCCTTCGT 59.559 45.455 0.00 0.00 0.00 3.85
958 1031 3.136009 ACCTTGAAAACTACCCCTTCG 57.864 47.619 0.00 0.00 0.00 3.79
959 1032 4.008330 GCTACCTTGAAAACTACCCCTTC 58.992 47.826 0.00 0.00 0.00 3.46
960 1033 3.396611 TGCTACCTTGAAAACTACCCCTT 59.603 43.478 0.00 0.00 0.00 3.95
961 1034 2.983898 TGCTACCTTGAAAACTACCCCT 59.016 45.455 0.00 0.00 0.00 4.79
962 1035 3.428413 TGCTACCTTGAAAACTACCCC 57.572 47.619 0.00 0.00 0.00 4.95
963 1036 3.945921 GGATGCTACCTTGAAAACTACCC 59.054 47.826 0.00 0.00 0.00 3.69
964 1037 3.945921 GGGATGCTACCTTGAAAACTACC 59.054 47.826 0.00 0.00 0.00 3.18
965 1038 4.585879 TGGGATGCTACCTTGAAAACTAC 58.414 43.478 0.00 0.00 0.00 2.73
993 1066 4.704540 TCCAGGTTTGTAAGCATACCAATG 59.295 41.667 9.24 1.47 45.38 2.82
1001 1074 4.699925 AGTACTTCCAGGTTTGTAAGCA 57.300 40.909 0.00 0.00 0.00 3.91
1008 1081 4.748701 TCAGGTCTAGTACTTCCAGGTTT 58.251 43.478 0.00 0.00 0.00 3.27
1015 1088 7.451501 AGTTGTAACTCAGGTCTAGTACTTC 57.548 40.000 0.00 0.00 32.86 3.01
1107 1180 5.252630 TGGAATTTCCCCTGCCAAAATATTT 59.747 36.000 12.90 0.00 35.03 1.40
1114 1187 3.704545 ATATGGAATTTCCCCTGCCAA 57.295 42.857 12.90 0.00 35.03 4.52
1158 1231 8.561536 TCACTCCCATAACTAAAGATTGGATA 57.438 34.615 0.00 0.00 0.00 2.59
1165 1238 8.934023 AATTTGTTCACTCCCATAACTAAAGA 57.066 30.769 0.00 0.00 0.00 2.52
1170 1243 5.476945 GTGGAATTTGTTCACTCCCATAACT 59.523 40.000 0.00 0.00 0.00 2.24
1194 1267 1.304052 TGAAGTGGGGATTTGGCCG 60.304 57.895 0.00 0.00 0.00 6.13
1234 1307 9.803507 TGAATTGCTATGGAGATCAATCTTTAT 57.196 29.630 0.00 0.00 37.25 1.40
1235 1308 9.803507 ATGAATTGCTATGGAGATCAATCTTTA 57.196 29.630 0.00 0.00 37.25 1.85
1293 1366 0.690762 TCAGGTGGAGTAAGTTGGGC 59.309 55.000 0.00 0.00 0.00 5.36
1303 1376 1.339610 CTCGCCTAGATTCAGGTGGAG 59.660 57.143 12.67 10.67 44.80 3.86
1306 1379 2.028130 ACTCTCGCCTAGATTCAGGTG 58.972 52.381 0.00 8.54 45.86 4.00
1325 1398 3.431486 CCAATCTCCTGCTCTGAGGTAAC 60.431 52.174 6.83 0.00 34.36 2.50
1327 1400 2.292521 ACCAATCTCCTGCTCTGAGGTA 60.293 50.000 6.83 0.00 34.36 3.08
1329 1402 1.138661 GACCAATCTCCTGCTCTGAGG 59.861 57.143 6.83 0.00 0.00 3.86
1333 1406 3.180507 AGAAAGACCAATCTCCTGCTCT 58.819 45.455 0.00 0.00 32.34 4.09
1334 1407 3.625649 AGAAAGACCAATCTCCTGCTC 57.374 47.619 0.00 0.00 32.34 4.26
1359 1432 3.168035 TGGGTGCAGTTGGTTAATGAT 57.832 42.857 0.00 0.00 0.00 2.45
1365 1438 1.042559 CCAGTTGGGTGCAGTTGGTT 61.043 55.000 0.00 0.00 0.00 3.67
1399 1472 5.103771 AGTCTCCTTGAAGGATATTGGCATT 60.104 40.000 15.35 0.00 44.81 3.56
1422 1495 2.827322 TCATCCAATGGAACTTGGCAAG 59.173 45.455 25.06 25.06 44.48 4.01
1441 1514 4.759693 AGGCACAATACGATTTCAAAGTCA 59.240 37.500 0.00 0.00 0.00 3.41
1443 1516 5.473504 AGAAGGCACAATACGATTTCAAAGT 59.526 36.000 0.00 0.00 0.00 2.66
1448 1521 5.447818 CCAAGAGAAGGCACAATACGATTTC 60.448 44.000 0.00 0.00 0.00 2.17
1452 1525 2.354704 CCCAAGAGAAGGCACAATACGA 60.355 50.000 0.00 0.00 0.00 3.43
1453 1526 2.009774 CCCAAGAGAAGGCACAATACG 58.990 52.381 0.00 0.00 0.00 3.06
1454 1527 3.010420 GTCCCAAGAGAAGGCACAATAC 58.990 50.000 0.00 0.00 0.00 1.89
1455 1528 2.912956 AGTCCCAAGAGAAGGCACAATA 59.087 45.455 0.00 0.00 0.00 1.90
1456 1529 1.707427 AGTCCCAAGAGAAGGCACAAT 59.293 47.619 0.00 0.00 0.00 2.71
1457 1530 1.072331 GAGTCCCAAGAGAAGGCACAA 59.928 52.381 0.00 0.00 0.00 3.33
1458 1531 0.687354 GAGTCCCAAGAGAAGGCACA 59.313 55.000 0.00 0.00 0.00 4.57
1459 1532 0.980423 AGAGTCCCAAGAGAAGGCAC 59.020 55.000 0.00 0.00 0.00 5.01
1460 1533 1.734655 AAGAGTCCCAAGAGAAGGCA 58.265 50.000 0.00 0.00 0.00 4.75
1461 1534 2.616765 GGAAAGAGTCCCAAGAGAAGGC 60.617 54.545 0.00 0.00 41.10 4.35
1462 1535 3.342377 GGAAAGAGTCCCAAGAGAAGG 57.658 52.381 0.00 0.00 41.10 3.46
1473 1546 6.540551 GGGATCTGAATAAGTTGGAAAGAGTC 59.459 42.308 0.00 0.00 0.00 3.36
1474 1547 6.216456 AGGGATCTGAATAAGTTGGAAAGAGT 59.784 38.462 0.00 0.00 0.00 3.24
1475 1548 6.657875 AGGGATCTGAATAAGTTGGAAAGAG 58.342 40.000 0.00 0.00 0.00 2.85
1476 1549 6.642733 AGGGATCTGAATAAGTTGGAAAGA 57.357 37.500 0.00 0.00 0.00 2.52
1477 1550 8.807948 TTAAGGGATCTGAATAAGTTGGAAAG 57.192 34.615 0.00 0.00 0.00 2.62
1478 1551 9.594936 TTTTAAGGGATCTGAATAAGTTGGAAA 57.405 29.630 0.00 0.00 0.00 3.13
1479 1552 9.243105 CTTTTAAGGGATCTGAATAAGTTGGAA 57.757 33.333 0.00 0.00 0.00 3.53
1480 1553 8.390921 ACTTTTAAGGGATCTGAATAAGTTGGA 58.609 33.333 0.00 0.00 0.00 3.53
1481 1554 8.581253 ACTTTTAAGGGATCTGAATAAGTTGG 57.419 34.615 0.00 0.00 0.00 3.77
1482 1555 9.846248 CAACTTTTAAGGGATCTGAATAAGTTG 57.154 33.333 17.04 17.04 36.89 3.16
1483 1556 9.025041 CCAACTTTTAAGGGATCTGAATAAGTT 57.975 33.333 0.00 0.00 31.92 2.66
1484 1557 8.170730 ACCAACTTTTAAGGGATCTGAATAAGT 58.829 33.333 0.00 0.00 0.00 2.24
1485 1558 8.581253 ACCAACTTTTAAGGGATCTGAATAAG 57.419 34.615 0.00 0.00 0.00 1.73
1486 1559 9.457436 GTACCAACTTTTAAGGGATCTGAATAA 57.543 33.333 0.00 0.00 0.00 1.40
1487 1560 8.832735 AGTACCAACTTTTAAGGGATCTGAATA 58.167 33.333 0.00 0.00 29.00 1.75
1488 1561 7.611855 CAGTACCAACTTTTAAGGGATCTGAAT 59.388 37.037 0.00 0.00 31.97 2.57
1489 1562 6.940298 CAGTACCAACTTTTAAGGGATCTGAA 59.060 38.462 0.00 0.00 31.97 3.02
1490 1563 6.472887 CAGTACCAACTTTTAAGGGATCTGA 58.527 40.000 0.00 0.00 31.97 3.27
1491 1564 5.123979 GCAGTACCAACTTTTAAGGGATCTG 59.876 44.000 0.00 0.00 31.97 2.90
1492 1565 5.222048 TGCAGTACCAACTTTTAAGGGATCT 60.222 40.000 0.00 0.00 31.97 2.75
1507 1580 5.830991 ACCTTAATCTGTTTTTGCAGTACCA 59.169 36.000 0.00 0.00 37.70 3.25
1568 1641 3.056821 TCACAGGATCTGTTGTTCTACCG 60.057 47.826 0.00 0.00 42.59 4.02
1594 1667 0.392060 GTGGGCCTTTAGTGGTACCG 60.392 60.000 7.57 0.00 0.00 4.02
1595 1668 0.694196 TGTGGGCCTTTAGTGGTACC 59.306 55.000 4.43 4.43 0.00 3.34
1597 1670 1.989586 ACATGTGGGCCTTTAGTGGTA 59.010 47.619 4.53 0.00 0.00 3.25
1598 1671 0.777446 ACATGTGGGCCTTTAGTGGT 59.223 50.000 4.53 0.00 0.00 4.16
1599 1672 1.271871 TGACATGTGGGCCTTTAGTGG 60.272 52.381 1.15 0.00 0.00 4.00
1600 1673 2.086869 CTGACATGTGGGCCTTTAGTG 58.913 52.381 1.15 0.00 0.00 2.74
1601 1674 1.705186 ACTGACATGTGGGCCTTTAGT 59.295 47.619 1.15 0.00 0.00 2.24
1602 1675 2.086869 CACTGACATGTGGGCCTTTAG 58.913 52.381 1.15 0.00 34.56 1.85
1603 1676 1.423541 ACACTGACATGTGGGCCTTTA 59.576 47.619 1.15 0.00 41.84 1.85
1604 1677 0.185901 ACACTGACATGTGGGCCTTT 59.814 50.000 1.15 0.00 41.84 3.11
1605 1678 0.185901 AACACTGACATGTGGGCCTT 59.814 50.000 1.15 0.00 41.84 4.35
1606 1679 0.250901 GAACACTGACATGTGGGCCT 60.251 55.000 1.15 0.00 41.84 5.19
1607 1680 0.250901 AGAACACTGACATGTGGGCC 60.251 55.000 1.15 0.00 41.84 5.80
1608 1681 1.609208 AAGAACACTGACATGTGGGC 58.391 50.000 1.15 0.00 41.84 5.36
1609 1682 4.654091 AAAAAGAACACTGACATGTGGG 57.346 40.909 1.15 0.00 41.84 4.61
1628 1701 5.485708 TGGGGAAGAAGACCAAAAAGAAAAA 59.514 36.000 0.00 0.00 0.00 1.94
1629 1702 5.026790 TGGGGAAGAAGACCAAAAAGAAAA 58.973 37.500 0.00 0.00 0.00 2.29
1630 1703 4.404394 GTGGGGAAGAAGACCAAAAAGAAA 59.596 41.667 0.00 0.00 35.77 2.52
1631 1704 3.958147 GTGGGGAAGAAGACCAAAAAGAA 59.042 43.478 0.00 0.00 35.77 2.52
1632 1705 3.562182 GTGGGGAAGAAGACCAAAAAGA 58.438 45.455 0.00 0.00 35.77 2.52
1633 1706 2.628178 GGTGGGGAAGAAGACCAAAAAG 59.372 50.000 0.00 0.00 35.77 2.27
1634 1707 2.673258 GGTGGGGAAGAAGACCAAAAA 58.327 47.619 0.00 0.00 35.77 1.94
1635 1708 1.477923 CGGTGGGGAAGAAGACCAAAA 60.478 52.381 0.00 0.00 35.77 2.44
1636 1709 0.109723 CGGTGGGGAAGAAGACCAAA 59.890 55.000 0.00 0.00 35.77 3.28
1637 1710 0.765135 TCGGTGGGGAAGAAGACCAA 60.765 55.000 0.00 0.00 35.77 3.67
1638 1711 0.765135 TTCGGTGGGGAAGAAGACCA 60.765 55.000 0.00 0.00 0.00 4.02
1639 1712 0.618981 ATTCGGTGGGGAAGAAGACC 59.381 55.000 0.00 0.00 0.00 3.85
1640 1713 1.739371 CGATTCGGTGGGGAAGAAGAC 60.739 57.143 0.00 0.00 0.00 3.01
1641 1714 0.535335 CGATTCGGTGGGGAAGAAGA 59.465 55.000 0.00 0.00 0.00 2.87
1642 1715 0.535335 TCGATTCGGTGGGGAAGAAG 59.465 55.000 6.18 0.00 0.00 2.85
1643 1716 0.248289 GTCGATTCGGTGGGGAAGAA 59.752 55.000 6.18 0.00 0.00 2.52
1644 1717 0.901114 TGTCGATTCGGTGGGGAAGA 60.901 55.000 6.18 0.00 0.00 2.87
1645 1718 0.460284 CTGTCGATTCGGTGGGGAAG 60.460 60.000 6.18 0.00 0.00 3.46
1646 1719 1.594833 CTGTCGATTCGGTGGGGAA 59.405 57.895 6.18 0.00 0.00 3.97
1647 1720 2.355986 CCTGTCGATTCGGTGGGGA 61.356 63.158 6.18 0.00 0.00 4.81
1648 1721 2.186903 CCTGTCGATTCGGTGGGG 59.813 66.667 6.18 0.64 0.00 4.96
1649 1722 1.141881 CTCCTGTCGATTCGGTGGG 59.858 63.158 6.18 6.07 0.00 4.61
1650 1723 0.179134 GTCTCCTGTCGATTCGGTGG 60.179 60.000 6.18 6.42 0.00 4.61
1651 1724 0.179134 GGTCTCCTGTCGATTCGGTG 60.179 60.000 6.18 0.00 0.00 4.94
1652 1725 1.321074 GGGTCTCCTGTCGATTCGGT 61.321 60.000 6.18 0.00 0.00 4.69
1653 1726 1.437986 GGGTCTCCTGTCGATTCGG 59.562 63.158 6.18 0.00 0.00 4.30
1654 1727 1.038130 AGGGGTCTCCTGTCGATTCG 61.038 60.000 0.00 0.00 46.07 3.34
1655 1728 2.903404 AGGGGTCTCCTGTCGATTC 58.097 57.895 0.00 0.00 46.07 2.52
1677 1750 3.832237 AAGTGTGGCAGCTGGTCGG 62.832 63.158 17.12 0.00 0.00 4.79
1678 1751 2.281070 AAGTGTGGCAGCTGGTCG 60.281 61.111 17.12 0.00 0.00 4.79
1679 1752 2.320587 CGAAGTGTGGCAGCTGGTC 61.321 63.158 17.12 0.00 0.00 4.02
1680 1753 2.281070 CGAAGTGTGGCAGCTGGT 60.281 61.111 17.12 0.00 0.00 4.00
1681 1754 3.730761 GCGAAGTGTGGCAGCTGG 61.731 66.667 17.12 0.00 0.00 4.85
1682 1755 3.730761 GGCGAAGTGTGGCAGCTG 61.731 66.667 10.11 10.11 0.00 4.24
1683 1756 3.482232 AAGGCGAAGTGTGGCAGCT 62.482 57.895 0.00 0.00 0.00 4.24
1684 1757 2.970974 GAAGGCGAAGTGTGGCAGC 61.971 63.158 0.00 0.00 0.00 5.25
1685 1758 1.294659 GAGAAGGCGAAGTGTGGCAG 61.295 60.000 0.00 0.00 0.00 4.85
1686 1759 1.301716 GAGAAGGCGAAGTGTGGCA 60.302 57.895 0.00 0.00 0.00 4.92
1687 1760 2.035442 GGAGAAGGCGAAGTGTGGC 61.035 63.158 0.00 0.00 0.00 5.01
1688 1761 0.671781 CTGGAGAAGGCGAAGTGTGG 60.672 60.000 0.00 0.00 0.00 4.17
1689 1762 0.671781 CCTGGAGAAGGCGAAGTGTG 60.672 60.000 0.00 0.00 39.93 3.82
1690 1763 1.674057 CCTGGAGAAGGCGAAGTGT 59.326 57.895 0.00 0.00 39.93 3.55
1691 1764 4.606071 CCTGGAGAAGGCGAAGTG 57.394 61.111 0.00 0.00 39.93 3.16
1699 1772 0.320771 CACCACCGAACCTGGAGAAG 60.321 60.000 0.00 0.00 32.55 2.85
1700 1773 1.752198 CACCACCGAACCTGGAGAA 59.248 57.895 0.00 0.00 32.55 2.87
1701 1774 2.879233 GCACCACCGAACCTGGAGA 61.879 63.158 0.00 0.00 32.55 3.71
1702 1775 2.358737 GCACCACCGAACCTGGAG 60.359 66.667 0.00 0.00 32.55 3.86
1703 1776 3.948719 GGCACCACCGAACCTGGA 61.949 66.667 0.00 0.00 32.55 3.86
1704 1777 3.953775 AGGCACCACCGAACCTGG 61.954 66.667 0.00 0.00 46.52 4.45
1705 1778 2.669569 CAGGCACCACCGAACCTG 60.670 66.667 0.00 0.00 46.52 4.00
1706 1779 2.847234 TCAGGCACCACCGAACCT 60.847 61.111 0.00 0.00 46.52 3.50
1707 1780 2.668550 GTCAGGCACCACCGAACC 60.669 66.667 0.00 0.00 46.52 3.62
1708 1781 3.041940 CGTCAGGCACCACCGAAC 61.042 66.667 0.00 0.00 46.52 3.95
1709 1782 3.220999 CTCGTCAGGCACCACCGAA 62.221 63.158 0.00 0.00 46.52 4.30
1710 1783 3.680786 CTCGTCAGGCACCACCGA 61.681 66.667 0.00 0.00 46.52 4.69
1731 1804 3.887868 GCATACCTTTGCCGCGGG 61.888 66.667 29.38 12.50 36.60 6.13
1768 1841 3.726517 CGCTGGGTCTGCCAAACG 61.727 66.667 0.00 0.00 36.17 3.60
1774 1847 4.459089 GGAGGTCGCTGGGTCTGC 62.459 72.222 0.00 0.00 0.00 4.26
1825 1898 1.864711 CGTGAATATAACCACTGGCCG 59.135 52.381 0.00 0.00 0.00 6.13
1829 1902 5.004440 CAGTTCGACGTGAATATAACCACTG 59.996 44.000 0.00 0.00 39.21 3.66
1892 1967 4.103103 CAGACGACGGCTGCTCGA 62.103 66.667 19.46 0.00 35.08 4.04
1905 1980 0.667792 GACACGTTCTCCCAGCAGAC 60.668 60.000 0.00 0.00 0.00 3.51
1908 1983 2.338620 CGACACGTTCTCCCAGCA 59.661 61.111 0.00 0.00 0.00 4.41
1963 2038 1.296867 CAATTGCGGCGTAAGAGCG 60.297 57.895 16.72 0.60 43.79 5.03
2044 2119 0.109781 CGAAATTCCACCAAGGTGCG 60.110 55.000 13.75 6.97 44.16 5.34
2081 2156 3.321648 ATCACCAGACTGGCGCCA 61.322 61.111 30.59 30.59 42.67 5.69
2082 2157 2.821366 CATCACCAGACTGGCGCC 60.821 66.667 22.73 22.73 42.67 6.53
2083 2158 2.821366 CCATCACCAGACTGGCGC 60.821 66.667 21.95 0.00 42.67 6.53
2084 2159 1.003355 AACCATCACCAGACTGGCG 60.003 57.895 21.95 12.64 42.67 5.69
2085 2160 0.962356 CCAACCATCACCAGACTGGC 60.962 60.000 21.95 0.00 42.67 4.85
2086 2161 0.322816 CCCAACCATCACCAGACTGG 60.323 60.000 20.45 20.45 45.02 4.00
2087 2162 0.962356 GCCCAACCATCACCAGACTG 60.962 60.000 0.00 0.00 0.00 3.51
2131 2249 1.485066 ACCCATCGTACCCAAGATGTC 59.515 52.381 7.44 0.00 41.81 3.06
2158 2276 4.827835 GGATAAAGTTTATTGAGCTCCCCC 59.172 45.833 12.15 0.00 0.00 5.40
2173 2291 0.108329 CGGTCGGCACTGGATAAAGT 60.108 55.000 0.00 0.00 0.00 2.66
2174 2292 0.108329 ACGGTCGGCACTGGATAAAG 60.108 55.000 0.00 0.00 32.44 1.85
2177 2295 0.322322 AAAACGGTCGGCACTGGATA 59.678 50.000 0.00 0.00 32.44 2.59
2178 2296 1.072505 AAAACGGTCGGCACTGGAT 59.927 52.632 0.00 0.00 32.44 3.41
2241 2361 7.913674 AAAAGGCATGAAACTGTAACAAAAA 57.086 28.000 0.00 0.00 0.00 1.94
2242 2362 9.039870 CATAAAAGGCATGAAACTGTAACAAAA 57.960 29.630 0.00 0.00 0.00 2.44
2243 2363 8.417106 TCATAAAAGGCATGAAACTGTAACAAA 58.583 29.630 0.00 0.00 29.55 2.83
2244 2364 7.946207 TCATAAAAGGCATGAAACTGTAACAA 58.054 30.769 0.00 0.00 29.55 2.83
2245 2365 7.446931 TCTCATAAAAGGCATGAAACTGTAACA 59.553 33.333 0.00 0.00 32.20 2.41
2246 2366 7.816640 TCTCATAAAAGGCATGAAACTGTAAC 58.183 34.615 0.00 0.00 32.20 2.50
2247 2367 7.994425 TCTCATAAAAGGCATGAAACTGTAA 57.006 32.000 0.00 0.00 32.20 2.41
2248 2368 8.049117 AGATCTCATAAAAGGCATGAAACTGTA 58.951 33.333 0.00 0.00 32.20 2.74
2249 2369 6.888632 AGATCTCATAAAAGGCATGAAACTGT 59.111 34.615 0.00 0.00 32.20 3.55
2250 2370 7.194278 CAGATCTCATAAAAGGCATGAAACTG 58.806 38.462 0.00 0.00 32.20 3.16
2251 2371 6.183360 GCAGATCTCATAAAAGGCATGAAACT 60.183 38.462 0.00 0.00 32.20 2.66
2252 2372 5.975939 GCAGATCTCATAAAAGGCATGAAAC 59.024 40.000 0.00 0.00 32.20 2.78
2253 2373 5.889853 AGCAGATCTCATAAAAGGCATGAAA 59.110 36.000 0.00 0.00 32.20 2.69
2254 2374 5.443283 AGCAGATCTCATAAAAGGCATGAA 58.557 37.500 0.00 0.00 32.20 2.57
2255 2375 5.045012 AGCAGATCTCATAAAAGGCATGA 57.955 39.130 0.00 0.00 0.00 3.07
2256 2376 6.228995 TCTAGCAGATCTCATAAAAGGCATG 58.771 40.000 0.00 0.00 0.00 4.06
2257 2377 6.269538 TCTCTAGCAGATCTCATAAAAGGCAT 59.730 38.462 0.00 0.00 0.00 4.40
2258 2378 5.600069 TCTCTAGCAGATCTCATAAAAGGCA 59.400 40.000 0.00 0.00 0.00 4.75
2259 2379 6.095432 TCTCTAGCAGATCTCATAAAAGGC 57.905 41.667 0.00 0.00 0.00 4.35
2260 2380 6.591062 GCATCTCTAGCAGATCTCATAAAAGG 59.409 42.308 0.00 0.00 40.20 3.11
2261 2381 7.380536 AGCATCTCTAGCAGATCTCATAAAAG 58.619 38.462 0.00 0.00 40.20 2.27
2262 2382 7.300556 AGCATCTCTAGCAGATCTCATAAAA 57.699 36.000 0.00 0.00 40.20 1.52
2263 2383 6.071447 GGAGCATCTCTAGCAGATCTCATAAA 60.071 42.308 18.91 0.00 40.20 1.40
2264 2384 5.418524 GGAGCATCTCTAGCAGATCTCATAA 59.581 44.000 18.91 0.00 40.20 1.90
2265 2385 4.949238 GGAGCATCTCTAGCAGATCTCATA 59.051 45.833 18.91 0.00 40.20 2.15
2266 2386 3.765511 GGAGCATCTCTAGCAGATCTCAT 59.234 47.826 18.91 0.00 40.20 2.90
2267 2387 3.156293 GGAGCATCTCTAGCAGATCTCA 58.844 50.000 18.91 0.00 40.20 3.27
2268 2388 3.156293 TGGAGCATCTCTAGCAGATCTC 58.844 50.000 0.00 14.52 40.20 2.75
2269 2389 3.241834 TGGAGCATCTCTAGCAGATCT 57.758 47.619 0.00 0.00 40.20 2.75
2270 2390 3.321682 ACTTGGAGCATCTCTAGCAGATC 59.678 47.826 2.74 0.00 40.20 2.75
2271 2391 3.307506 ACTTGGAGCATCTCTAGCAGAT 58.692 45.455 0.00 0.44 43.33 2.90
2272 2392 2.692557 GACTTGGAGCATCTCTAGCAGA 59.307 50.000 0.00 0.00 34.78 4.26
2273 2393 2.694628 AGACTTGGAGCATCTCTAGCAG 59.305 50.000 0.00 0.00 33.73 4.24
2274 2394 2.692557 GAGACTTGGAGCATCTCTAGCA 59.307 50.000 0.00 0.00 36.69 3.49
2275 2395 2.287547 CGAGACTTGGAGCATCTCTAGC 60.288 54.545 0.00 0.00 37.35 3.42
2276 2396 2.293122 CCGAGACTTGGAGCATCTCTAG 59.707 54.545 1.99 0.00 37.35 2.43
2277 2397 2.092375 TCCGAGACTTGGAGCATCTCTA 60.092 50.000 7.42 0.00 37.35 2.43
2278 2398 1.110442 CCGAGACTTGGAGCATCTCT 58.890 55.000 1.99 0.00 37.35 3.10
2279 2399 1.107114 TCCGAGACTTGGAGCATCTC 58.893 55.000 7.42 0.00 36.35 2.75
2280 2400 1.561643 TTCCGAGACTTGGAGCATCT 58.438 50.000 11.43 0.00 36.72 2.90
2281 2401 2.386661 TTTCCGAGACTTGGAGCATC 57.613 50.000 11.43 0.00 36.72 3.91
2282 2402 2.859165 TTTTCCGAGACTTGGAGCAT 57.141 45.000 11.43 0.00 36.72 3.79
2283 2403 2.303022 AGATTTTCCGAGACTTGGAGCA 59.697 45.455 11.43 3.27 36.72 4.26
2284 2404 2.933260 GAGATTTTCCGAGACTTGGAGC 59.067 50.000 11.43 3.75 36.72 4.70
2285 2405 4.464069 AGAGATTTTCCGAGACTTGGAG 57.536 45.455 11.43 0.00 36.72 3.86
2286 2406 4.322801 GGAAGAGATTTTCCGAGACTTGGA 60.323 45.833 7.42 7.42 37.48 3.53
2287 2407 3.935828 GGAAGAGATTTTCCGAGACTTGG 59.064 47.826 1.73 1.73 37.48 3.61
2296 2416 3.611766 TCTGGTCGGAAGAGATTTTCC 57.388 47.619 0.00 0.00 43.49 3.13
2297 2417 4.315803 TGTTCTGGTCGGAAGAGATTTTC 58.684 43.478 0.00 0.00 43.49 2.29
2298 2418 4.351874 TGTTCTGGTCGGAAGAGATTTT 57.648 40.909 0.00 0.00 43.49 1.82
2299 2419 4.508662 GATGTTCTGGTCGGAAGAGATTT 58.491 43.478 0.00 0.00 43.49 2.17
2300 2420 3.118592 GGATGTTCTGGTCGGAAGAGATT 60.119 47.826 0.00 0.00 43.49 2.40
2301 2421 2.432510 GGATGTTCTGGTCGGAAGAGAT 59.567 50.000 0.00 0.00 43.49 2.75
2302 2422 1.825474 GGATGTTCTGGTCGGAAGAGA 59.175 52.381 0.00 0.00 43.49 3.10
2303 2423 1.134670 GGGATGTTCTGGTCGGAAGAG 60.135 57.143 0.00 0.00 43.49 2.85
2304 2424 0.902531 GGGATGTTCTGGTCGGAAGA 59.097 55.000 0.00 0.00 38.16 2.87
2305 2425 0.905357 AGGGATGTTCTGGTCGGAAG 59.095 55.000 0.00 0.00 0.00 3.46
2306 2426 2.108168 CTAGGGATGTTCTGGTCGGAA 58.892 52.381 0.00 0.00 0.00 4.30
2307 2427 1.286849 TCTAGGGATGTTCTGGTCGGA 59.713 52.381 0.00 0.00 0.00 4.55
2308 2428 1.776662 TCTAGGGATGTTCTGGTCGG 58.223 55.000 0.00 0.00 0.00 4.79
2309 2429 3.377346 CATCTAGGGATGTTCTGGTCG 57.623 52.381 0.00 0.00 43.04 4.79
2319 2439 6.859112 ATGAATAACGCTACATCTAGGGAT 57.141 37.500 0.00 0.00 36.60 3.85
2320 2440 7.956328 ATATGAATAACGCTACATCTAGGGA 57.044 36.000 0.00 0.00 36.60 4.20
2321 2441 8.251026 TGAATATGAATAACGCTACATCTAGGG 58.749 37.037 0.00 0.00 38.59 3.53
2322 2442 9.809096 ATGAATATGAATAACGCTACATCTAGG 57.191 33.333 0.00 0.00 0.00 3.02
2328 2448 8.556194 GGTGAAATGAATATGAATAACGCTACA 58.444 33.333 0.00 0.00 0.00 2.74
2329 2449 8.015658 GGGTGAAATGAATATGAATAACGCTAC 58.984 37.037 0.00 0.00 0.00 3.58
2330 2450 7.174253 GGGGTGAAATGAATATGAATAACGCTA 59.826 37.037 0.00 0.00 0.00 4.26
2331 2451 6.016276 GGGGTGAAATGAATATGAATAACGCT 60.016 38.462 0.00 0.00 0.00 5.07
2332 2452 6.016276 AGGGGTGAAATGAATATGAATAACGC 60.016 38.462 0.00 0.00 0.00 4.84
2333 2453 7.362662 CAGGGGTGAAATGAATATGAATAACG 58.637 38.462 0.00 0.00 0.00 3.18
2334 2454 7.014615 AGCAGGGGTGAAATGAATATGAATAAC 59.985 37.037 0.00 0.00 0.00 1.89
2335 2455 7.068702 AGCAGGGGTGAAATGAATATGAATAA 58.931 34.615 0.00 0.00 0.00 1.40
2336 2456 6.613699 AGCAGGGGTGAAATGAATATGAATA 58.386 36.000 0.00 0.00 0.00 1.75
2337 2457 5.461327 AGCAGGGGTGAAATGAATATGAAT 58.539 37.500 0.00 0.00 0.00 2.57
2338 2458 4.870636 AGCAGGGGTGAAATGAATATGAA 58.129 39.130 0.00 0.00 0.00 2.57
2339 2459 4.464008 GAGCAGGGGTGAAATGAATATGA 58.536 43.478 0.00 0.00 0.00 2.15
2340 2460 3.571401 GGAGCAGGGGTGAAATGAATATG 59.429 47.826 0.00 0.00 0.00 1.78
2341 2461 3.464833 AGGAGCAGGGGTGAAATGAATAT 59.535 43.478 0.00 0.00 0.00 1.28
2342 2462 2.852449 AGGAGCAGGGGTGAAATGAATA 59.148 45.455 0.00 0.00 0.00 1.75
2343 2463 1.642762 AGGAGCAGGGGTGAAATGAAT 59.357 47.619 0.00 0.00 0.00 2.57
2344 2464 1.075601 AGGAGCAGGGGTGAAATGAA 58.924 50.000 0.00 0.00 0.00 2.57
2345 2465 1.559682 GTAGGAGCAGGGGTGAAATGA 59.440 52.381 0.00 0.00 0.00 2.57
2346 2466 1.281867 TGTAGGAGCAGGGGTGAAATG 59.718 52.381 0.00 0.00 0.00 2.32
2347 2467 1.668826 TGTAGGAGCAGGGGTGAAAT 58.331 50.000 0.00 0.00 0.00 2.17
2348 2468 1.668826 ATGTAGGAGCAGGGGTGAAA 58.331 50.000 0.00 0.00 0.00 2.69
2349 2469 1.668826 AATGTAGGAGCAGGGGTGAA 58.331 50.000 0.00 0.00 0.00 3.18
2350 2470 1.668826 AAATGTAGGAGCAGGGGTGA 58.331 50.000 0.00 0.00 0.00 4.02
2351 2471 2.505819 AGTAAATGTAGGAGCAGGGGTG 59.494 50.000 0.00 0.00 0.00 4.61
2352 2472 2.846950 AGTAAATGTAGGAGCAGGGGT 58.153 47.619 0.00 0.00 0.00 4.95
2353 2473 4.223953 TCTAGTAAATGTAGGAGCAGGGG 58.776 47.826 0.00 0.00 0.00 4.79
2354 2474 5.598830 TCTTCTAGTAAATGTAGGAGCAGGG 59.401 44.000 0.00 0.00 0.00 4.45
2355 2475 6.716934 TCTTCTAGTAAATGTAGGAGCAGG 57.283 41.667 0.00 0.00 0.00 4.85
2356 2476 6.693545 CGTTCTTCTAGTAAATGTAGGAGCAG 59.306 42.308 0.00 0.00 0.00 4.24
2357 2477 6.561614 CGTTCTTCTAGTAAATGTAGGAGCA 58.438 40.000 0.00 0.00 0.00 4.26
2358 2478 5.459434 GCGTTCTTCTAGTAAATGTAGGAGC 59.541 44.000 0.00 0.00 0.00 4.70
2359 2479 5.978322 GGCGTTCTTCTAGTAAATGTAGGAG 59.022 44.000 0.00 0.00 0.00 3.69
2360 2480 5.449588 CGGCGTTCTTCTAGTAAATGTAGGA 60.450 44.000 0.00 0.00 0.00 2.94
2361 2481 4.738740 CGGCGTTCTTCTAGTAAATGTAGG 59.261 45.833 0.00 0.00 0.00 3.18
2362 2482 5.229469 CACGGCGTTCTTCTAGTAAATGTAG 59.771 44.000 11.19 0.00 0.00 2.74
2363 2483 5.097529 CACGGCGTTCTTCTAGTAAATGTA 58.902 41.667 11.19 0.00 0.00 2.29
2364 2484 3.924686 CACGGCGTTCTTCTAGTAAATGT 59.075 43.478 11.19 0.00 0.00 2.71
2365 2485 3.241995 GCACGGCGTTCTTCTAGTAAATG 60.242 47.826 11.19 0.00 0.00 2.32
2366 2486 2.928116 GCACGGCGTTCTTCTAGTAAAT 59.072 45.455 11.19 0.00 0.00 1.40
2367 2487 2.288334 TGCACGGCGTTCTTCTAGTAAA 60.288 45.455 11.19 0.00 0.00 2.01
2368 2488 1.270274 TGCACGGCGTTCTTCTAGTAA 59.730 47.619 11.19 0.00 0.00 2.24
2369 2489 0.883153 TGCACGGCGTTCTTCTAGTA 59.117 50.000 11.19 0.00 0.00 1.82
2370 2490 0.246635 ATGCACGGCGTTCTTCTAGT 59.753 50.000 11.19 0.00 0.00 2.57
2371 2491 1.061131 CAATGCACGGCGTTCTTCTAG 59.939 52.381 11.19 0.00 35.42 2.43
2372 2492 1.075542 CAATGCACGGCGTTCTTCTA 58.924 50.000 11.19 0.00 35.42 2.10
2373 2493 1.868997 CAATGCACGGCGTTCTTCT 59.131 52.632 11.19 0.00 35.42 2.85
2374 2494 1.797537 GCAATGCACGGCGTTCTTC 60.798 57.895 11.19 0.02 35.42 2.87
2375 2495 2.069465 TTGCAATGCACGGCGTTCTT 62.069 50.000 11.19 0.00 38.71 2.52
2376 2496 2.551006 TTGCAATGCACGGCGTTCT 61.551 52.632 11.19 0.00 38.71 3.01
2377 2497 2.050533 TTGCAATGCACGGCGTTC 60.051 55.556 11.19 6.16 38.71 3.95
2378 2498 2.354539 GTTGCAATGCACGGCGTT 60.355 55.556 11.19 0.00 38.71 4.84
2379 2499 4.681643 CGTTGCAATGCACGGCGT 62.682 61.111 7.72 6.77 38.71 5.68
2387 2507 3.629883 ATGTGGCCGCGTTGCAATG 62.630 57.895 14.54 14.54 0.00 2.82
2388 2508 1.590610 TAATGTGGCCGCGTTGCAAT 61.591 50.000 29.89 9.30 0.00 3.56
2389 2509 1.796190 TTAATGTGGCCGCGTTGCAA 61.796 50.000 29.89 16.60 0.00 4.08
2390 2510 2.261586 TTAATGTGGCCGCGTTGCA 61.262 52.632 29.89 15.81 0.00 4.08
2391 2511 1.799916 GTTAATGTGGCCGCGTTGC 60.800 57.895 29.89 19.48 0.00 4.17
2392 2512 0.239879 AAGTTAATGTGGCCGCGTTG 59.760 50.000 29.89 0.00 0.00 4.10
2393 2513 0.955905 AAAGTTAATGTGGCCGCGTT 59.044 45.000 26.13 26.13 0.00 4.84
2394 2514 1.810959 TAAAGTTAATGTGGCCGCGT 58.189 45.000 12.58 8.90 0.00 6.01
2395 2515 2.417239 TCTTAAAGTTAATGTGGCCGCG 59.583 45.455 12.58 0.00 0.00 6.46
2396 2516 3.439129 ACTCTTAAAGTTAATGTGGCCGC 59.561 43.478 10.11 10.11 33.03 6.53
2397 2517 5.622770 AACTCTTAAAGTTAATGTGGCCG 57.377 39.130 0.00 0.00 46.55 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.