Multiple sequence alignment - TraesCS2B01G596500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G596500 chr2B 100.000 4510 0 0 1 4510 779858699 779854190 0.000000e+00 8329
1 TraesCS2B01G596500 chr2B 98.352 182 3 0 4329 4510 232742023 232741842 2.020000e-83 320
2 TraesCS2B01G596500 chr2B 97.297 185 4 1 4327 4510 32923534 32923350 3.390000e-81 313
3 TraesCS2B01G596500 chr2B 87.952 166 14 3 1785 1947 779856682 779856520 1.660000e-44 191
4 TraesCS2B01G596500 chr2B 87.952 166 14 3 2018 2180 779856915 779856753 1.660000e-44 191
5 TraesCS2B01G596500 chr2A 94.441 1727 74 12 2343 4066 777287464 777289171 0.000000e+00 2638
6 TraesCS2B01G596500 chr2A 87.085 1595 119 37 395 1947 777285783 777287332 0.000000e+00 1724
7 TraesCS2B01G596500 chr2A 90.968 310 18 7 2018 2321 777287167 777287472 4.200000e-110 409
8 TraesCS2B01G596500 chr2D 88.586 2015 160 39 1 1987 650864365 650862393 0.000000e+00 2383
9 TraesCS2B01G596500 chr2D 95.913 832 30 3 2343 3172 650862304 650861475 0.000000e+00 1345
10 TraesCS2B01G596500 chr2D 94.268 785 35 4 3168 3943 650861396 650860613 0.000000e+00 1192
11 TraesCS2B01G596500 chr2D 88.636 308 27 6 2018 2321 650862599 650862296 7.130000e-98 368
12 TraesCS2B01G596500 chr2D 87.407 135 16 1 1 134 608526861 608526727 2.170000e-33 154
13 TraesCS2B01G596500 chr7B 85.826 769 67 25 778 1528 332556646 332557390 0.000000e+00 778
14 TraesCS2B01G596500 chr7B 97.814 183 3 1 4329 4510 536122590 536122772 9.420000e-82 315
15 TraesCS2B01G596500 chrUn 97.814 183 3 1 4329 4510 263809917 263810099 9.420000e-82 315
16 TraesCS2B01G596500 chrUn 97.814 183 3 1 4329 4510 289980046 289979864 9.420000e-82 315
17 TraesCS2B01G596500 chrUn 97.297 185 4 1 4327 4510 276927017 276926833 3.390000e-81 313
18 TraesCS2B01G596500 chr6A 97.312 186 4 1 4326 4510 70919484 70919299 9.420000e-82 315
19 TraesCS2B01G596500 chr5B 97.283 184 4 1 4328 4510 634269310 634269493 1.220000e-80 311
20 TraesCS2B01G596500 chr3B 95.789 190 7 1 4322 4510 825297216 825297027 5.670000e-79 305
21 TraesCS2B01G596500 chr3B 87.582 153 16 2 4131 4280 328715594 328715442 1.670000e-39 174
22 TraesCS2B01G596500 chr6D 88.435 147 13 3 4130 4273 349988584 349988439 1.670000e-39 174
23 TraesCS2B01G596500 chr6D 85.806 155 18 3 4127 4278 408903175 408903022 1.300000e-35 161
24 TraesCS2B01G596500 chr6D 87.879 132 15 1 1 131 20298191 20298322 2.170000e-33 154
25 TraesCS2B01G596500 chr6D 87.786 131 15 1 1 131 431160700 431160829 7.810000e-33 152
26 TraesCS2B01G596500 chr4D 87.500 152 15 3 4130 4278 74079501 74079351 6.000000e-39 172
27 TraesCS2B01G596500 chr3D 86.624 157 17 3 4125 4278 288550456 288550611 2.160000e-38 171
28 TraesCS2B01G596500 chr3D 86.452 155 16 3 4131 4280 199109776 199109930 1.000000e-36 165
29 TraesCS2B01G596500 chr3D 89.062 128 14 0 3 130 305314317 305314444 4.670000e-35 159
30 TraesCS2B01G596500 chr3D 87.786 131 16 0 1 131 128214136 128214006 2.170000e-33 154
31 TraesCS2B01G596500 chr5A 90.000 130 13 0 1 130 206730501 206730372 7.760000e-38 169
32 TraesCS2B01G596500 chr3A 86.842 152 16 3 4131 4278 310691937 310692088 2.790000e-37 167
33 TraesCS2B01G596500 chr3A 86.452 155 16 3 4130 4281 582283364 582283212 1.000000e-36 165
34 TraesCS2B01G596500 chr1A 85.987 157 18 3 4126 4279 155857860 155857705 1.000000e-36 165
35 TraesCS2B01G596500 chr1A 87.786 131 16 0 1 131 62961064 62960934 2.170000e-33 154
36 TraesCS2B01G596500 chr4A 86.232 138 19 0 1 138 469242928 469243065 2.810000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G596500 chr2B 779854190 779858699 4509 True 2903.666667 8329 91.968000 1 4510 3 chr2B.!!$R3 4509
1 TraesCS2B01G596500 chr2A 777285783 777289171 3388 False 1590.333333 2638 90.831333 395 4066 3 chr2A.!!$F1 3671
2 TraesCS2B01G596500 chr2D 650860613 650864365 3752 True 1322.000000 2383 91.850750 1 3943 4 chr2D.!!$R2 3942
3 TraesCS2B01G596500 chr7B 332556646 332557390 744 False 778.000000 778 85.826000 778 1528 1 chr7B.!!$F1 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 245 0.396556 AAAGGGTGAAGGCCAACGTT 60.397 50.000 5.01 0.0 41.83 3.99 F
1154 1193 0.249398 CTCCCCGGACCTAACAACTG 59.751 60.000 0.73 0.0 0.00 3.16 F
1208 1252 0.319297 ACGCTCTTACTTTCGCCGTT 60.319 50.000 0.00 0.0 0.00 4.44 F
1215 1259 0.509499 TACTTTCGCCGTTTGCTTCG 59.491 50.000 0.00 0.0 38.05 3.79 F
1216 1260 1.278637 CTTTCGCCGTTTGCTTCGT 59.721 52.632 0.00 0.0 38.05 3.85 F
2044 2097 0.109597 CCTTCTGGCATTGACAACGC 60.110 55.000 0.00 0.0 0.00 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1205 1249 0.042535 TGCGAAAGACGAAGCAAACG 60.043 50.000 0.00 0.00 45.77 3.60 R
2025 2078 0.109597 GCGTTGTCAATGCCAGAAGG 60.110 55.000 17.49 0.00 37.44 3.46 R
2039 2092 0.383491 CGAAAGTGCTGACAGCGTTG 60.383 55.000 22.00 7.83 46.26 4.10 R
2042 2095 0.666274 TACCGAAAGTGCTGACAGCG 60.666 55.000 22.00 8.65 46.26 5.18 R
2569 2627 1.302832 GGAAGCCATAGCATCGGGG 60.303 63.158 0.00 0.00 43.56 5.73 R
3959 4112 1.128188 ATGCCGGATCTCCCCCTAAC 61.128 60.000 5.05 0.00 0.00 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 6.717540 AGGTCTAGATACATCCACATGTAGTC 59.282 42.308 0.00 0.00 46.52 2.59
183 187 6.258230 TGATTTGTTGAGTTAATGCAGGAG 57.742 37.500 0.00 0.00 0.00 3.69
196 200 1.443872 CAGGAGGTGCGACGTACAC 60.444 63.158 17.84 11.73 37.31 2.90
215 219 6.572254 CGTACACGAGAAAAATCAAACGAATT 59.428 34.615 0.00 0.00 43.02 2.17
224 228 8.417884 AGAAAAATCAAACGAATTAGGGACAAA 58.582 29.630 0.00 0.00 0.00 2.83
235 239 1.606601 GGGACAAAGGGTGAAGGCC 60.607 63.158 0.00 0.00 0.00 5.19
236 240 1.152830 GGACAAAGGGTGAAGGCCA 59.847 57.895 5.01 0.00 0.00 5.36
241 245 0.396556 AAAGGGTGAAGGCCAACGTT 60.397 50.000 5.01 0.00 41.83 3.99
259 263 4.263435 ACGTTCAAAAACCAACTCCACTA 58.737 39.130 0.00 0.00 31.27 2.74
269 273 7.974482 AAACCAACTCCACTATAACAGTAAC 57.026 36.000 0.00 0.00 34.98 2.50
274 278 8.316214 CCAACTCCACTATAACAGTAACCTTAA 58.684 37.037 0.00 0.00 34.98 1.85
301 305 4.895889 AGAGATTGTAAGACCGGATCATGA 59.104 41.667 9.46 0.00 0.00 3.07
306 310 2.251409 AAGACCGGATCATGATGCTG 57.749 50.000 22.82 19.11 0.00 4.41
308 312 0.604780 GACCGGATCATGATGCTGGG 60.605 60.000 27.97 22.78 31.25 4.45
330 334 4.517285 GATGAAGCCATAACCAAGAGACA 58.483 43.478 0.00 0.00 32.09 3.41
335 339 3.010420 GCCATAACCAAGAGACAGAACC 58.990 50.000 0.00 0.00 0.00 3.62
338 342 5.256474 CCATAACCAAGAGACAGAACCATT 58.744 41.667 0.00 0.00 0.00 3.16
340 344 6.127897 CCATAACCAAGAGACAGAACCATTTC 60.128 42.308 0.00 0.00 0.00 2.17
348 352 4.530875 AGACAGAACCATTTCCCATGATC 58.469 43.478 0.00 0.00 31.28 2.92
353 357 4.581824 AGAACCATTTCCCATGATCGAATG 59.418 41.667 0.00 0.00 31.28 2.67
370 374 3.440228 GAATGCTCGACCTCTTACTGAC 58.560 50.000 0.00 0.00 0.00 3.51
381 385 4.401837 ACCTCTTACTGACCGAATCTAACC 59.598 45.833 0.00 0.00 0.00 2.85
387 391 2.761208 CTGACCGAATCTAACCCAGACT 59.239 50.000 0.00 0.00 35.62 3.24
488 494 2.632987 ACGGCCAAACTTTCTAGTGT 57.367 45.000 2.24 0.00 34.01 3.55
490 496 3.284617 ACGGCCAAACTTTCTAGTGTTT 58.715 40.909 2.24 0.00 36.91 2.83
503 509 6.870971 TTCTAGTGTTTGGTTAATTTCGCT 57.129 33.333 0.00 0.00 0.00 4.93
504 510 6.236017 TCTAGTGTTTGGTTAATTTCGCTG 57.764 37.500 0.00 0.00 0.00 5.18
519 525 9.906660 TTAATTTCGCTGAAAAATATTGTCTGT 57.093 25.926 7.59 0.00 35.11 3.41
520 526 7.801547 ATTTCGCTGAAAAATATTGTCTGTG 57.198 32.000 7.59 10.92 35.11 3.66
522 528 6.312399 TCGCTGAAAAATATTGTCTGTGTT 57.688 33.333 14.28 0.00 0.00 3.32
523 529 6.370593 TCGCTGAAAAATATTGTCTGTGTTC 58.629 36.000 14.28 0.00 0.00 3.18
537 543 7.015226 TGTCTGTGTTCTTAATGTCAAACAG 57.985 36.000 0.00 0.00 36.08 3.16
641 648 5.816919 AGAATTAGACAAACAAACGTGGTG 58.183 37.500 0.00 0.00 0.00 4.17
699 718 5.045578 GGGCTGCTAATCCTAATCCTAATCA 60.046 44.000 0.00 0.00 0.00 2.57
701 720 6.597280 GGCTGCTAATCCTAATCCTAATCAAG 59.403 42.308 0.00 0.00 0.00 3.02
764 789 2.892425 CTTCCGCAGTCCATCGCC 60.892 66.667 0.00 0.00 0.00 5.54
825 854 3.155167 CCTACCCGAGCTCACCCC 61.155 72.222 15.40 0.00 0.00 4.95
973 1012 3.141488 CAGTAGCGCGAGGGAGGT 61.141 66.667 12.10 0.00 0.00 3.85
975 1014 1.823041 AGTAGCGCGAGGGAGGTAC 60.823 63.158 12.10 0.00 44.15 3.34
977 1016 1.822613 TAGCGCGAGGGAGGTACTG 60.823 63.158 12.10 0.00 41.55 2.74
993 1032 2.682155 ACTGAGAGGCCGAAAGATTC 57.318 50.000 0.00 0.00 0.00 2.52
1147 1186 3.759101 GTCCCCTCCCCGGACCTA 61.759 72.222 0.73 0.00 43.48 3.08
1148 1187 2.954089 TCCCCTCCCCGGACCTAA 60.954 66.667 0.73 0.00 33.16 2.69
1150 1189 2.039951 CCCTCCCCGGACCTAACA 59.960 66.667 0.73 0.00 33.16 2.41
1151 1190 1.614226 CCCTCCCCGGACCTAACAA 60.614 63.158 0.73 0.00 33.16 2.83
1152 1191 1.600638 CCTCCCCGGACCTAACAAC 59.399 63.158 0.73 0.00 33.16 3.32
1153 1192 0.908180 CCTCCCCGGACCTAACAACT 60.908 60.000 0.73 0.00 33.16 3.16
1154 1193 0.249398 CTCCCCGGACCTAACAACTG 59.751 60.000 0.73 0.00 0.00 3.16
1160 1204 2.629051 CGGACCTAACAACTGAATCCC 58.371 52.381 0.00 0.00 0.00 3.85
1165 1209 3.910627 ACCTAACAACTGAATCCCACTCT 59.089 43.478 0.00 0.00 0.00 3.24
1182 1226 2.621055 ACTCTCGATTCCTTCCTGATCG 59.379 50.000 0.00 0.00 36.24 3.69
1203 1247 2.657372 GTCACTGACGCTCTTACTTTCG 59.343 50.000 0.00 0.00 0.00 3.46
1204 1248 1.387084 CACTGACGCTCTTACTTTCGC 59.613 52.381 0.00 0.00 0.00 4.70
1205 1249 0.992802 CTGACGCTCTTACTTTCGCC 59.007 55.000 0.00 0.00 0.00 5.54
1206 1250 0.731514 TGACGCTCTTACTTTCGCCG 60.732 55.000 0.00 0.00 0.00 6.46
1207 1251 0.731855 GACGCTCTTACTTTCGCCGT 60.732 55.000 0.00 0.00 0.00 5.68
1208 1252 0.319297 ACGCTCTTACTTTCGCCGTT 60.319 50.000 0.00 0.00 0.00 4.44
1209 1253 0.788391 CGCTCTTACTTTCGCCGTTT 59.212 50.000 0.00 0.00 0.00 3.60
1210 1254 1.461888 CGCTCTTACTTTCGCCGTTTG 60.462 52.381 0.00 0.00 0.00 2.93
1211 1255 1.724973 GCTCTTACTTTCGCCGTTTGC 60.725 52.381 0.00 0.00 0.00 3.68
1212 1256 1.798813 CTCTTACTTTCGCCGTTTGCT 59.201 47.619 0.00 0.00 38.05 3.91
1213 1257 2.215196 TCTTACTTTCGCCGTTTGCTT 58.785 42.857 0.00 0.00 38.05 3.91
1214 1258 2.222445 TCTTACTTTCGCCGTTTGCTTC 59.778 45.455 0.00 0.00 38.05 3.86
1215 1259 0.509499 TACTTTCGCCGTTTGCTTCG 59.491 50.000 0.00 0.00 38.05 3.79
1216 1260 1.278637 CTTTCGCCGTTTGCTTCGT 59.721 52.632 0.00 0.00 38.05 3.85
1494 1540 4.966787 GGGTCGGTTGGCTGGCAA 62.967 66.667 13.06 13.06 0.00 4.52
1497 1543 2.281484 TCGGTTGGCTGGCAACTC 60.281 61.111 35.61 26.70 33.41 3.01
1516 1569 3.834231 ACTCCCCCAAATCAAATCTTGTG 59.166 43.478 0.00 0.00 0.00 3.33
1539 1592 2.191128 ATGCTGAACCTTCCTGACAC 57.809 50.000 0.00 0.00 0.00 3.67
1563 1616 3.360249 ACTTGATGCAACTTCTTGTGC 57.640 42.857 0.00 0.00 0.00 4.57
1605 1658 4.792804 GTGAGCTCTGGCCTGCCC 62.793 72.222 16.19 0.00 39.73 5.36
1687 1740 3.044059 GCAGCAGGCGTGGTTCATC 62.044 63.158 8.63 0.00 29.64 2.92
1719 1772 2.281484 GGCGGAACAGAGTGGCAA 60.281 61.111 0.00 0.00 0.00 4.52
1836 1889 5.590663 TGTCAGCACTTTTGGTATGTTGTTA 59.409 36.000 0.00 0.00 0.00 2.41
1851 1904 7.174253 GGTATGTTGTTACTCTTGATTGGTCAA 59.826 37.037 0.00 0.00 41.89 3.18
1855 1908 9.126151 TGTTGTTACTCTTGATTGGTCAAAATA 57.874 29.630 0.00 0.00 43.39 1.40
1888 1941 4.155310 GCCAAAATGCGTTACAACTACT 57.845 40.909 0.00 0.00 0.00 2.57
1889 1942 5.285798 GCCAAAATGCGTTACAACTACTA 57.714 39.130 0.00 0.00 0.00 1.82
1890 1943 5.084055 GCCAAAATGCGTTACAACTACTAC 58.916 41.667 0.00 0.00 0.00 2.73
1891 1944 5.334260 GCCAAAATGCGTTACAACTACTACA 60.334 40.000 0.00 0.00 0.00 2.74
1892 1945 6.660722 CCAAAATGCGTTACAACTACTACAA 58.339 36.000 0.00 0.00 0.00 2.41
1893 1946 7.302524 CCAAAATGCGTTACAACTACTACAAT 58.697 34.615 0.00 0.00 0.00 2.71
1894 1947 8.444715 CCAAAATGCGTTACAACTACTACAATA 58.555 33.333 0.00 0.00 0.00 1.90
1895 1948 9.982291 CAAAATGCGTTACAACTACTACAATAT 57.018 29.630 0.00 0.00 0.00 1.28
1899 1952 8.188531 TGCGTTACAACTACTACAATATTTCC 57.811 34.615 0.00 0.00 0.00 3.13
1900 1953 8.036575 TGCGTTACAACTACTACAATATTTCCT 58.963 33.333 0.00 0.00 0.00 3.36
1901 1954 8.325997 GCGTTACAACTACTACAATATTTCCTG 58.674 37.037 0.00 0.00 0.00 3.86
1902 1955 9.362539 CGTTACAACTACTACAATATTTCCTGT 57.637 33.333 0.00 0.00 0.00 4.00
1904 1957 9.661563 TTACAACTACTACAATATTTCCTGTGG 57.338 33.333 0.00 0.00 0.00 4.17
1905 1958 7.913789 ACAACTACTACAATATTTCCTGTGGA 58.086 34.615 0.00 0.00 0.00 4.02
1906 1959 8.041323 ACAACTACTACAATATTTCCTGTGGAG 58.959 37.037 0.00 0.00 31.21 3.86
1907 1960 7.973048 ACTACTACAATATTTCCTGTGGAGA 57.027 36.000 0.00 0.00 31.21 3.71
1908 1961 8.375493 ACTACTACAATATTTCCTGTGGAGAA 57.625 34.615 0.00 0.00 31.21 2.87
1909 1962 8.822805 ACTACTACAATATTTCCTGTGGAGAAA 58.177 33.333 0.00 0.00 37.61 2.52
1910 1963 9.838339 CTACTACAATATTTCCTGTGGAGAAAT 57.162 33.333 4.36 4.36 44.19 2.17
1911 1964 8.738645 ACTACAATATTTCCTGTGGAGAAATC 57.261 34.615 2.22 0.00 41.76 2.17
1912 1965 8.328758 ACTACAATATTTCCTGTGGAGAAATCA 58.671 33.333 2.22 0.00 41.76 2.57
1913 1966 7.636150 ACAATATTTCCTGTGGAGAAATCAG 57.364 36.000 2.22 0.00 41.76 2.90
1914 1967 7.177878 ACAATATTTCCTGTGGAGAAATCAGT 58.822 34.615 2.22 0.00 41.76 3.41
1915 1968 8.328758 ACAATATTTCCTGTGGAGAAATCAGTA 58.671 33.333 2.22 0.00 41.76 2.74
1916 1969 9.347240 CAATATTTCCTGTGGAGAAATCAGTAT 57.653 33.333 2.22 0.00 41.76 2.12
1917 1970 9.927081 AATATTTCCTGTGGAGAAATCAGTATT 57.073 29.630 2.22 0.00 41.76 1.89
1918 1971 7.636150 ATTTCCTGTGGAGAAATCAGTATTG 57.364 36.000 0.00 0.00 39.20 1.90
1919 1972 5.762179 TCCTGTGGAGAAATCAGTATTGT 57.238 39.130 0.00 0.00 0.00 2.71
1920 1973 5.491070 TCCTGTGGAGAAATCAGTATTGTG 58.509 41.667 0.00 0.00 0.00 3.33
1921 1974 4.637534 CCTGTGGAGAAATCAGTATTGTGG 59.362 45.833 0.00 0.00 0.00 4.17
1922 1975 5.241403 TGTGGAGAAATCAGTATTGTGGT 57.759 39.130 0.00 0.00 0.00 4.16
1923 1976 5.630121 TGTGGAGAAATCAGTATTGTGGTT 58.370 37.500 0.00 0.00 0.00 3.67
1924 1977 6.774673 TGTGGAGAAATCAGTATTGTGGTTA 58.225 36.000 0.00 0.00 0.00 2.85
1925 1978 7.402054 TGTGGAGAAATCAGTATTGTGGTTAT 58.598 34.615 0.00 0.00 0.00 1.89
1926 1979 8.544622 TGTGGAGAAATCAGTATTGTGGTTATA 58.455 33.333 0.00 0.00 0.00 0.98
1927 1980 9.561069 GTGGAGAAATCAGTATTGTGGTTATAT 57.439 33.333 0.00 0.00 0.00 0.86
1928 1981 9.559732 TGGAGAAATCAGTATTGTGGTTATATG 57.440 33.333 0.00 0.00 0.00 1.78
1929 1982 9.561069 GGAGAAATCAGTATTGTGGTTATATGT 57.439 33.333 0.00 0.00 0.00 2.29
1931 1984 9.342308 AGAAATCAGTATTGTGGTTATATGTGG 57.658 33.333 0.00 0.00 0.00 4.17
1932 1985 9.120538 GAAATCAGTATTGTGGTTATATGTGGT 57.879 33.333 0.00 0.00 0.00 4.16
1933 1986 9.474313 AAATCAGTATTGTGGTTATATGTGGTT 57.526 29.630 0.00 0.00 0.00 3.67
1934 1987 7.857734 TCAGTATTGTGGTTATATGTGGTTG 57.142 36.000 0.00 0.00 0.00 3.77
1935 1988 7.398829 TCAGTATTGTGGTTATATGTGGTTGT 58.601 34.615 0.00 0.00 0.00 3.32
1936 1989 7.885922 TCAGTATTGTGGTTATATGTGGTTGTT 59.114 33.333 0.00 0.00 0.00 2.83
1937 1990 8.519526 CAGTATTGTGGTTATATGTGGTTGTTT 58.480 33.333 0.00 0.00 0.00 2.83
1938 1991 8.736244 AGTATTGTGGTTATATGTGGTTGTTTC 58.264 33.333 0.00 0.00 0.00 2.78
1939 1992 6.961360 TTGTGGTTATATGTGGTTGTTTCA 57.039 33.333 0.00 0.00 0.00 2.69
1940 1993 7.531857 TTGTGGTTATATGTGGTTGTTTCAT 57.468 32.000 0.00 0.00 0.00 2.57
1941 1994 6.918626 TGTGGTTATATGTGGTTGTTTCATG 58.081 36.000 0.00 0.00 0.00 3.07
1942 1995 6.717084 TGTGGTTATATGTGGTTGTTTCATGA 59.283 34.615 0.00 0.00 0.00 3.07
1943 1996 7.231519 TGTGGTTATATGTGGTTGTTTCATGAA 59.768 33.333 3.38 3.38 0.00 2.57
1944 1997 7.540745 GTGGTTATATGTGGTTGTTTCATGAAC 59.459 37.037 7.89 4.45 38.78 3.18
1945 1998 7.033185 GGTTATATGTGGTTGTTTCATGAACC 58.967 38.462 7.89 7.53 41.85 3.62
1946 1999 7.093945 GGTTATATGTGGTTGTTTCATGAACCT 60.094 37.037 7.89 0.00 41.99 3.50
1947 2000 4.589216 ATGTGGTTGTTTCATGAACCTG 57.411 40.909 7.89 0.00 41.99 4.00
1948 2001 3.625853 TGTGGTTGTTTCATGAACCTGA 58.374 40.909 7.89 0.00 41.99 3.86
1949 2002 4.019858 TGTGGTTGTTTCATGAACCTGAA 58.980 39.130 7.89 0.00 41.99 3.02
1950 2003 4.648762 TGTGGTTGTTTCATGAACCTGAAT 59.351 37.500 7.89 0.00 41.99 2.57
1951 2004 5.830457 TGTGGTTGTTTCATGAACCTGAATA 59.170 36.000 7.89 0.00 41.99 1.75
1952 2005 6.493115 TGTGGTTGTTTCATGAACCTGAATAT 59.507 34.615 7.89 0.00 41.99 1.28
1953 2006 6.808212 GTGGTTGTTTCATGAACCTGAATATG 59.192 38.462 7.89 0.00 41.99 1.78
1954 2007 6.718912 TGGTTGTTTCATGAACCTGAATATGA 59.281 34.615 7.89 0.00 41.99 2.15
1955 2008 7.094248 TGGTTGTTTCATGAACCTGAATATGAG 60.094 37.037 7.89 0.00 41.99 2.90
1956 2009 7.094205 GGTTGTTTCATGAACCTGAATATGAGT 60.094 37.037 7.89 0.00 38.91 3.41
1957 2010 8.946085 GTTGTTTCATGAACCTGAATATGAGTA 58.054 33.333 7.89 0.00 37.45 2.59
1958 2011 9.685276 TTGTTTCATGAACCTGAATATGAGTAT 57.315 29.630 7.89 0.00 37.45 2.12
1959 2012 9.685276 TGTTTCATGAACCTGAATATGAGTATT 57.315 29.630 7.89 0.00 37.45 1.89
1962 2015 9.551734 TTCATGAACCTGAATATGAGTATTCTG 57.448 33.333 3.38 8.26 44.24 3.02
1963 2016 8.708378 TCATGAACCTGAATATGAGTATTCTGT 58.292 33.333 0.00 4.72 44.24 3.41
1964 2017 9.987272 CATGAACCTGAATATGAGTATTCTGTA 57.013 33.333 8.97 0.00 44.24 2.74
1970 2023 9.613957 CCTGAATATGAGTATTCTGTAAGTACG 57.386 37.037 8.97 0.00 44.24 3.67
1994 2047 9.437045 ACGTTAAAAGTTTAAATCGGTAAAGTG 57.563 29.630 9.79 0.00 34.71 3.16
1995 2048 9.437045 CGTTAAAAGTTTAAATCGGTAAAGTGT 57.563 29.630 0.00 0.00 34.71 3.55
1998 2051 8.845942 AAAAGTTTAAATCGGTAAAGTGTGTC 57.154 30.769 0.00 0.00 29.11 3.67
1999 2052 6.549912 AGTTTAAATCGGTAAAGTGTGTCC 57.450 37.500 0.00 0.00 0.00 4.02
2000 2053 5.471116 AGTTTAAATCGGTAAAGTGTGTCCC 59.529 40.000 0.00 0.00 0.00 4.46
2001 2054 3.495434 AAATCGGTAAAGTGTGTCCCA 57.505 42.857 0.00 0.00 0.00 4.37
2002 2055 3.713826 AATCGGTAAAGTGTGTCCCAT 57.286 42.857 0.00 0.00 0.00 4.00
2003 2056 2.754946 TCGGTAAAGTGTGTCCCATC 57.245 50.000 0.00 0.00 0.00 3.51
2004 2057 2.253610 TCGGTAAAGTGTGTCCCATCT 58.746 47.619 0.00 0.00 0.00 2.90
2005 2058 3.433343 TCGGTAAAGTGTGTCCCATCTA 58.567 45.455 0.00 0.00 0.00 1.98
2006 2059 4.028131 TCGGTAAAGTGTGTCCCATCTAT 58.972 43.478 0.00 0.00 0.00 1.98
2007 2060 4.468510 TCGGTAAAGTGTGTCCCATCTATT 59.531 41.667 0.00 0.00 0.00 1.73
2008 2061 4.570772 CGGTAAAGTGTGTCCCATCTATTG 59.429 45.833 0.00 0.00 0.00 1.90
2009 2062 4.335594 GGTAAAGTGTGTCCCATCTATTGC 59.664 45.833 0.00 0.00 0.00 3.56
2010 2063 2.717639 AGTGTGTCCCATCTATTGCC 57.282 50.000 0.00 0.00 0.00 4.52
2011 2064 1.915489 AGTGTGTCCCATCTATTGCCA 59.085 47.619 0.00 0.00 0.00 4.92
2012 2065 2.308570 AGTGTGTCCCATCTATTGCCAA 59.691 45.455 0.00 0.00 0.00 4.52
2013 2066 2.423538 GTGTGTCCCATCTATTGCCAAC 59.576 50.000 0.00 0.00 0.00 3.77
2014 2067 2.308570 TGTGTCCCATCTATTGCCAACT 59.691 45.455 0.00 0.00 0.00 3.16
2015 2068 3.521531 TGTGTCCCATCTATTGCCAACTA 59.478 43.478 0.00 0.00 0.00 2.24
2016 2069 4.018870 TGTGTCCCATCTATTGCCAACTAA 60.019 41.667 0.00 0.00 0.00 2.24
2017 2070 4.947388 GTGTCCCATCTATTGCCAACTAAA 59.053 41.667 0.00 0.00 0.00 1.85
2018 2071 5.594317 GTGTCCCATCTATTGCCAACTAAAT 59.406 40.000 0.00 0.00 0.00 1.40
2019 2072 5.593909 TGTCCCATCTATTGCCAACTAAATG 59.406 40.000 0.00 0.00 0.00 2.32
2020 2073 5.594317 GTCCCATCTATTGCCAACTAAATGT 59.406 40.000 0.00 0.00 0.00 2.71
2021 2074 5.827797 TCCCATCTATTGCCAACTAAATGTC 59.172 40.000 0.00 0.00 0.00 3.06
2022 2075 5.593909 CCCATCTATTGCCAACTAAATGTCA 59.406 40.000 0.00 0.00 0.00 3.58
2023 2076 6.096705 CCCATCTATTGCCAACTAAATGTCAA 59.903 38.462 0.00 0.00 0.00 3.18
2024 2077 7.198390 CCATCTATTGCCAACTAAATGTCAAG 58.802 38.462 0.00 0.00 0.00 3.02
2025 2078 6.194796 TCTATTGCCAACTAAATGTCAAGC 57.805 37.500 0.00 0.00 0.00 4.01
2026 2079 3.658757 TTGCCAACTAAATGTCAAGCC 57.341 42.857 0.00 0.00 0.00 4.35
2027 2080 2.875296 TGCCAACTAAATGTCAAGCCT 58.125 42.857 0.00 0.00 0.00 4.58
2028 2081 3.230134 TGCCAACTAAATGTCAAGCCTT 58.770 40.909 0.00 0.00 0.00 4.35
2029 2082 3.255642 TGCCAACTAAATGTCAAGCCTTC 59.744 43.478 0.00 0.00 0.00 3.46
2030 2083 3.507622 GCCAACTAAATGTCAAGCCTTCT 59.492 43.478 0.00 0.00 0.00 2.85
2031 2084 4.616835 GCCAACTAAATGTCAAGCCTTCTG 60.617 45.833 0.00 0.00 0.00 3.02
2032 2085 4.082571 CCAACTAAATGTCAAGCCTTCTGG 60.083 45.833 0.00 0.00 0.00 3.86
2044 2097 0.109597 CCTTCTGGCATTGACAACGC 60.110 55.000 0.00 0.00 0.00 4.84
2045 2098 0.877071 CTTCTGGCATTGACAACGCT 59.123 50.000 6.17 0.00 0.00 5.07
2046 2099 0.592637 TTCTGGCATTGACAACGCTG 59.407 50.000 6.17 0.30 0.00 5.18
2047 2100 0.534877 TCTGGCATTGACAACGCTGT 60.535 50.000 6.17 0.00 38.98 4.40
2055 2108 4.540153 ACAACGCTGTCAGCACTT 57.460 50.000 24.13 11.71 42.58 3.16
2056 2109 2.780595 ACAACGCTGTCAGCACTTT 58.219 47.368 24.13 11.02 42.58 2.66
2057 2110 0.657840 ACAACGCTGTCAGCACTTTC 59.342 50.000 24.13 0.00 42.58 2.62
2058 2111 0.383491 CAACGCTGTCAGCACTTTCG 60.383 55.000 24.13 9.38 42.58 3.46
2059 2112 1.498865 AACGCTGTCAGCACTTTCGG 61.499 55.000 24.13 8.67 42.58 4.30
2060 2113 1.956170 CGCTGTCAGCACTTTCGGT 60.956 57.895 24.13 0.00 42.58 4.69
2061 2114 0.666274 CGCTGTCAGCACTTTCGGTA 60.666 55.000 24.13 0.00 42.58 4.02
2062 2115 1.726853 GCTGTCAGCACTTTCGGTAT 58.273 50.000 20.16 0.00 41.89 2.73
2063 2116 1.394917 GCTGTCAGCACTTTCGGTATG 59.605 52.381 20.16 0.00 41.89 2.39
2064 2117 2.688507 CTGTCAGCACTTTCGGTATGT 58.311 47.619 0.00 0.00 0.00 2.29
2065 2118 3.067106 CTGTCAGCACTTTCGGTATGTT 58.933 45.455 0.00 0.00 0.00 2.71
2066 2119 2.805671 TGTCAGCACTTTCGGTATGTTG 59.194 45.455 0.00 0.00 0.00 3.33
2067 2120 2.806244 GTCAGCACTTTCGGTATGTTGT 59.194 45.455 0.00 0.00 0.00 3.32
2068 2121 3.250040 GTCAGCACTTTCGGTATGTTGTT 59.750 43.478 0.00 0.00 0.00 2.83
2069 2122 3.496884 TCAGCACTTTCGGTATGTTGTTC 59.503 43.478 0.00 0.00 0.00 3.18
2070 2123 2.812011 AGCACTTTCGGTATGTTGTTCC 59.188 45.455 0.00 0.00 0.00 3.62
2071 2124 2.812011 GCACTTTCGGTATGTTGTTCCT 59.188 45.455 0.00 0.00 0.00 3.36
2072 2125 3.120304 GCACTTTCGGTATGTTGTTCCTC 60.120 47.826 0.00 0.00 0.00 3.71
2073 2126 4.315803 CACTTTCGGTATGTTGTTCCTCT 58.684 43.478 0.00 0.00 0.00 3.69
2074 2127 4.755123 CACTTTCGGTATGTTGTTCCTCTT 59.245 41.667 0.00 0.00 0.00 2.85
2075 2128 4.755123 ACTTTCGGTATGTTGTTCCTCTTG 59.245 41.667 0.00 0.00 0.00 3.02
2076 2129 4.610605 TTCGGTATGTTGTTCCTCTTGA 57.389 40.909 0.00 0.00 0.00 3.02
2077 2130 4.819105 TCGGTATGTTGTTCCTCTTGAT 57.181 40.909 0.00 0.00 0.00 2.57
2078 2131 5.160607 TCGGTATGTTGTTCCTCTTGATT 57.839 39.130 0.00 0.00 0.00 2.57
2079 2132 4.935205 TCGGTATGTTGTTCCTCTTGATTG 59.065 41.667 0.00 0.00 0.00 2.67
2114 2167 1.787057 TTCGCGCCAAAATCCGTTGT 61.787 50.000 0.00 0.00 0.00 3.32
2164 2220 9.784531 AGAAATCAGTATTGAGGTTATATGTGG 57.215 33.333 0.00 0.00 36.61 4.17
2187 2243 5.710099 GGTTGTTTCATGAACCTATTCCTCA 59.290 40.000 7.89 0.00 38.91 3.86
2188 2244 6.127897 GGTTGTTTCATGAACCTATTCCTCAG 60.128 42.308 7.89 0.00 38.91 3.35
2189 2245 6.126863 TGTTTCATGAACCTATTCCTCAGT 57.873 37.500 7.89 0.00 37.45 3.41
2191 2247 4.142609 TCATGAACCTATTCCTCAGTGC 57.857 45.455 0.00 0.00 33.49 4.40
2203 2259 2.979676 CAGTGCCGCTGCCTTTGA 60.980 61.111 0.00 0.00 38.52 2.69
2206 2262 2.518112 TGCCGCTGCCTTTGAACA 60.518 55.556 0.00 0.00 36.33 3.18
2223 2279 8.921670 CCTTTGAACATTAAAAGGTTAAATCGG 58.078 33.333 11.19 0.00 44.93 4.18
2224 2280 9.471084 CTTTGAACATTAAAAGGTTAAATCGGT 57.529 29.630 0.00 0.00 32.47 4.69
2256 2312 2.065899 TTGCCAACTAAAGTGTGCCT 57.934 45.000 2.73 0.00 0.00 4.75
2307 2364 9.085645 TGAGTATTCTGTAAGTAAAGGAGTTCA 57.914 33.333 0.00 0.00 33.76 3.18
2313 2370 7.378966 TCTGTAAGTAAAGGAGTTCAGTCATG 58.621 38.462 0.00 0.00 33.76 3.07
2314 2371 7.232737 TCTGTAAGTAAAGGAGTTCAGTCATGA 59.767 37.037 0.00 0.00 33.76 3.07
2315 2372 7.732025 TGTAAGTAAAGGAGTTCAGTCATGAA 58.268 34.615 0.00 0.00 43.20 2.57
2316 2373 8.208224 TGTAAGTAAAGGAGTTCAGTCATGAAA 58.792 33.333 0.00 0.00 46.75 2.69
2317 2374 9.052759 GTAAGTAAAGGAGTTCAGTCATGAAAA 57.947 33.333 0.00 0.00 46.75 2.29
2318 2375 8.697507 AAGTAAAGGAGTTCAGTCATGAAAAT 57.302 30.769 0.00 0.00 46.75 1.82
2319 2376 8.329203 AGTAAAGGAGTTCAGTCATGAAAATC 57.671 34.615 0.00 0.00 46.75 2.17
2320 2377 8.160106 AGTAAAGGAGTTCAGTCATGAAAATCT 58.840 33.333 0.00 0.00 46.75 2.40
2321 2378 7.446001 AAAGGAGTTCAGTCATGAAAATCTC 57.554 36.000 0.00 2.57 46.75 2.75
2322 2379 6.119240 AGGAGTTCAGTCATGAAAATCTCA 57.881 37.500 0.00 0.00 46.75 3.27
2323 2380 5.936956 AGGAGTTCAGTCATGAAAATCTCAC 59.063 40.000 0.00 0.00 46.75 3.51
2324 2381 5.123027 GGAGTTCAGTCATGAAAATCTCACC 59.877 44.000 0.00 0.00 46.75 4.02
2325 2382 5.006386 AGTTCAGTCATGAAAATCTCACCC 58.994 41.667 0.00 0.00 46.75 4.61
2326 2383 3.599343 TCAGTCATGAAAATCTCACCCG 58.401 45.455 0.00 0.00 36.69 5.28
2327 2384 3.007940 TCAGTCATGAAAATCTCACCCGT 59.992 43.478 0.00 0.00 36.69 5.28
2328 2385 3.125829 CAGTCATGAAAATCTCACCCGTG 59.874 47.826 0.00 0.00 36.69 4.94
2329 2386 3.074412 GTCATGAAAATCTCACCCGTGT 58.926 45.455 0.00 0.00 36.69 4.49
2330 2387 3.125316 GTCATGAAAATCTCACCCGTGTC 59.875 47.826 0.00 0.00 36.69 3.67
2331 2388 2.920724 TGAAAATCTCACCCGTGTCA 57.079 45.000 0.00 0.00 0.00 3.58
2332 2389 3.417069 TGAAAATCTCACCCGTGTCAT 57.583 42.857 0.00 0.00 0.00 3.06
2333 2390 3.750371 TGAAAATCTCACCCGTGTCATT 58.250 40.909 0.00 0.00 0.00 2.57
2334 2391 4.141287 TGAAAATCTCACCCGTGTCATTT 58.859 39.130 0.00 0.00 0.00 2.32
2335 2392 4.215399 TGAAAATCTCACCCGTGTCATTTC 59.785 41.667 0.00 3.83 0.00 2.17
2336 2393 3.417069 AATCTCACCCGTGTCATTTCA 57.583 42.857 0.00 0.00 0.00 2.69
2337 2394 3.634397 ATCTCACCCGTGTCATTTCAT 57.366 42.857 0.00 0.00 0.00 2.57
2338 2395 4.753516 ATCTCACCCGTGTCATTTCATA 57.246 40.909 0.00 0.00 0.00 2.15
2339 2396 3.857052 TCTCACCCGTGTCATTTCATAC 58.143 45.455 0.00 0.00 0.00 2.39
2340 2397 3.513912 TCTCACCCGTGTCATTTCATACT 59.486 43.478 0.00 0.00 0.00 2.12
2341 2398 4.707934 TCTCACCCGTGTCATTTCATACTA 59.292 41.667 0.00 0.00 0.00 1.82
2346 2403 6.036083 CACCCGTGTCATTTCATACTAGAAAG 59.964 42.308 0.00 0.00 40.49 2.62
2415 2473 7.771183 TGTCATTGGGATTTAAATACTTCTGC 58.229 34.615 10.27 0.00 0.00 4.26
2686 2744 3.885297 TGACCTCAAAGGAAGAAAAGCTG 59.115 43.478 0.00 0.00 37.67 4.24
2713 2771 2.240667 ACTCATGGAGATGAACCAAGGG 59.759 50.000 0.00 0.00 38.17 3.95
2737 2795 1.748122 CCAGTGCATGGGAGTCAGC 60.748 63.158 0.48 0.00 46.36 4.26
2888 2946 9.806203 TTACTTGTGTAGCTTTTATATCGCTTA 57.194 29.630 0.00 0.00 35.33 3.09
2889 2947 8.712285 ACTTGTGTAGCTTTTATATCGCTTAA 57.288 30.769 0.00 0.00 35.33 1.85
2909 2967 7.363431 GCTTAAAAATACCATAGATCCAGCAC 58.637 38.462 0.00 0.00 0.00 4.40
2975 3033 5.913137 TGTTTCCAGAAATCAAAGTGTGT 57.087 34.783 0.00 0.00 32.36 3.72
3051 3109 3.115390 TGCCAGTAAAAGCTAGATCCCT 58.885 45.455 0.00 0.00 0.00 4.20
3052 3110 3.118261 TGCCAGTAAAAGCTAGATCCCTG 60.118 47.826 0.00 0.00 0.00 4.45
3054 3112 4.698575 CCAGTAAAAGCTAGATCCCTGTC 58.301 47.826 0.00 0.00 0.00 3.51
3059 3117 3.902881 AAGCTAGATCCCTGTCACTTG 57.097 47.619 0.00 0.00 0.00 3.16
3153 3212 5.077134 AGGAACTGGAAATTGCTTAATGC 57.923 39.130 0.00 0.00 37.18 3.56
3208 3350 7.490962 TTAATTTCTCTGTGGTACAACTGTG 57.509 36.000 1.23 2.61 44.16 3.66
3242 3384 4.694760 ATAGGTCTGTTAGATGCATGCA 57.305 40.909 25.04 25.04 0.00 3.96
3251 3393 4.168760 GTTAGATGCATGCAAACCAAGAC 58.831 43.478 26.68 12.92 0.00 3.01
3257 3399 3.054878 GCATGCAAACCAAGACTTTCAG 58.945 45.455 14.21 0.00 0.00 3.02
3273 3415 4.999950 ACTTTCAGAGTTCTTGTATGCTGG 59.000 41.667 0.00 0.00 33.92 4.85
3294 3436 7.559533 TGCTGGTTTAATCTGGAATGCTTAATA 59.440 33.333 0.00 0.00 0.00 0.98
3527 3669 1.876322 AAGATAATGCTCGCTCCTGC 58.124 50.000 0.00 0.00 0.00 4.85
3642 3784 8.817100 CACTGTATCAATCAATAAGCGAGTTTA 58.183 33.333 0.00 0.00 0.00 2.01
3681 3823 8.628630 TGTTGTTGTATCAGATCAATAAACCA 57.371 30.769 0.00 0.00 0.00 3.67
3741 3890 2.033049 GTGCCATGTTGCATCTGATCTC 59.967 50.000 0.00 0.00 44.30 2.75
3831 3982 3.548818 GCCTGCTCTTTTGTGTGTGTAAG 60.549 47.826 0.00 0.00 0.00 2.34
3848 3999 5.163509 TGTGTAAGCATTTGCAGTTTTGGTA 60.164 36.000 5.20 0.00 45.16 3.25
3860 4011 4.737054 CAGTTTTGGTATCATTGAGTGCC 58.263 43.478 0.00 0.00 0.00 5.01
3865 4016 1.064758 GGTATCATTGAGTGCCCACCA 60.065 52.381 0.00 0.00 0.00 4.17
3866 4017 2.620367 GGTATCATTGAGTGCCCACCAA 60.620 50.000 0.00 0.56 0.00 3.67
3912 4063 2.290323 GGAAGTGTAGGGTTGTGCTCAT 60.290 50.000 0.00 0.00 0.00 2.90
3959 4112 5.868801 ACATTTACAATTCGCATGGAAAAGG 59.131 36.000 0.00 0.00 38.36 3.11
3973 4126 2.175069 GGAAAAGGTTAGGGGGAGATCC 59.825 54.545 0.00 0.00 0.00 3.36
4066 4219 7.615582 AGCGTGTTTATGTAGTACAGTACTA 57.384 36.000 15.43 15.43 40.14 1.82
4067 4220 8.218338 AGCGTGTTTATGTAGTACAGTACTAT 57.782 34.615 21.07 11.46 42.68 2.12
4068 4221 8.680903 AGCGTGTTTATGTAGTACAGTACTATT 58.319 33.333 21.07 14.74 42.68 1.73
4069 4222 9.294030 GCGTGTTTATGTAGTACAGTACTATTT 57.706 33.333 21.07 14.45 42.68 1.40
4083 4236 8.726870 ACAGTACTATTTATTTATGCGTTGGT 57.273 30.769 0.00 0.00 0.00 3.67
4084 4237 9.169592 ACAGTACTATTTATTTATGCGTTGGTT 57.830 29.630 0.00 0.00 0.00 3.67
4085 4238 9.646336 CAGTACTATTTATTTATGCGTTGGTTC 57.354 33.333 0.00 0.00 0.00 3.62
4086 4239 8.545420 AGTACTATTTATTTATGCGTTGGTTCG 58.455 33.333 0.00 0.00 0.00 3.95
4087 4240 7.311364 ACTATTTATTTATGCGTTGGTTCGT 57.689 32.000 0.00 0.00 0.00 3.85
4088 4241 7.754625 ACTATTTATTTATGCGTTGGTTCGTT 58.245 30.769 0.00 0.00 0.00 3.85
4089 4242 8.238631 ACTATTTATTTATGCGTTGGTTCGTTT 58.761 29.630 0.00 0.00 0.00 3.60
4090 4243 7.876896 ATTTATTTATGCGTTGGTTCGTTTT 57.123 28.000 0.00 0.00 0.00 2.43
4091 4244 8.967552 ATTTATTTATGCGTTGGTTCGTTTTA 57.032 26.923 0.00 0.00 0.00 1.52
4092 4245 8.437443 TTTATTTATGCGTTGGTTCGTTTTAG 57.563 30.769 0.00 0.00 0.00 1.85
4093 4246 5.421212 TTTATGCGTTGGTTCGTTTTAGT 57.579 34.783 0.00 0.00 0.00 2.24
4094 4247 2.741122 TGCGTTGGTTCGTTTTAGTG 57.259 45.000 0.00 0.00 0.00 2.74
4095 4248 1.268133 TGCGTTGGTTCGTTTTAGTGC 60.268 47.619 0.00 0.00 0.00 4.40
4096 4249 1.003223 GCGTTGGTTCGTTTTAGTGCT 60.003 47.619 0.00 0.00 0.00 4.40
4097 4250 2.635444 CGTTGGTTCGTTTTAGTGCTG 58.365 47.619 0.00 0.00 0.00 4.41
4098 4251 2.285756 CGTTGGTTCGTTTTAGTGCTGA 59.714 45.455 0.00 0.00 0.00 4.26
4099 4252 3.059188 CGTTGGTTCGTTTTAGTGCTGAT 60.059 43.478 0.00 0.00 0.00 2.90
4100 4253 4.219033 GTTGGTTCGTTTTAGTGCTGATG 58.781 43.478 0.00 0.00 0.00 3.07
4101 4254 3.734463 TGGTTCGTTTTAGTGCTGATGA 58.266 40.909 0.00 0.00 0.00 2.92
4102 4255 4.130857 TGGTTCGTTTTAGTGCTGATGAA 58.869 39.130 0.00 0.00 0.00 2.57
4103 4256 4.759693 TGGTTCGTTTTAGTGCTGATGAAT 59.240 37.500 0.00 0.00 0.00 2.57
4104 4257 5.935206 TGGTTCGTTTTAGTGCTGATGAATA 59.065 36.000 0.00 0.00 0.00 1.75
4105 4258 6.597672 TGGTTCGTTTTAGTGCTGATGAATAT 59.402 34.615 0.00 0.00 0.00 1.28
4106 4259 6.907212 GGTTCGTTTTAGTGCTGATGAATATG 59.093 38.462 0.00 0.00 0.00 1.78
4107 4260 7.201609 GGTTCGTTTTAGTGCTGATGAATATGA 60.202 37.037 0.00 0.00 0.00 2.15
4108 4261 8.338259 GTTCGTTTTAGTGCTGATGAATATGAT 58.662 33.333 0.00 0.00 0.00 2.45
4109 4262 8.076714 TCGTTTTAGTGCTGATGAATATGATC 57.923 34.615 0.00 0.00 0.00 2.92
4110 4263 7.928167 TCGTTTTAGTGCTGATGAATATGATCT 59.072 33.333 0.00 0.00 0.00 2.75
4111 4264 8.008279 CGTTTTAGTGCTGATGAATATGATCTG 58.992 37.037 0.00 0.00 0.00 2.90
4112 4265 8.834465 GTTTTAGTGCTGATGAATATGATCTGT 58.166 33.333 0.00 0.00 0.00 3.41
4114 4267 9.702494 TTTAGTGCTGATGAATATGATCTGTAG 57.298 33.333 0.00 0.00 0.00 2.74
4115 4268 6.164876 AGTGCTGATGAATATGATCTGTAGC 58.835 40.000 0.00 0.00 0.00 3.58
4116 4269 6.014413 AGTGCTGATGAATATGATCTGTAGCT 60.014 38.462 0.00 0.00 0.00 3.32
4117 4270 6.649973 GTGCTGATGAATATGATCTGTAGCTT 59.350 38.462 0.00 0.00 0.00 3.74
4118 4271 6.872547 TGCTGATGAATATGATCTGTAGCTTC 59.127 38.462 0.00 0.00 0.00 3.86
4119 4272 6.872547 GCTGATGAATATGATCTGTAGCTTCA 59.127 38.462 0.00 0.00 0.00 3.02
4120 4273 7.063662 GCTGATGAATATGATCTGTAGCTTCAG 59.936 40.741 13.79 13.79 36.85 3.02
4121 4274 7.960262 TGATGAATATGATCTGTAGCTTCAGT 58.040 34.615 18.55 7.54 36.85 3.41
4122 4275 8.427276 TGATGAATATGATCTGTAGCTTCAGTT 58.573 33.333 18.55 11.44 36.85 3.16
4123 4276 8.604640 ATGAATATGATCTGTAGCTTCAGTTG 57.395 34.615 18.55 0.00 36.85 3.16
4124 4277 7.785033 TGAATATGATCTGTAGCTTCAGTTGA 58.215 34.615 18.55 6.64 36.85 3.18
4125 4278 8.260114 TGAATATGATCTGTAGCTTCAGTTGAA 58.740 33.333 18.55 1.40 36.85 2.69
4126 4279 9.270640 GAATATGATCTGTAGCTTCAGTTGAAT 57.729 33.333 18.55 6.16 36.85 2.57
4128 4281 9.926158 ATATGATCTGTAGCTTCAGTTGAATAG 57.074 33.333 18.55 0.00 36.85 1.73
4129 4282 7.175347 TGATCTGTAGCTTCAGTTGAATAGT 57.825 36.000 18.55 0.00 36.85 2.12
4130 4283 7.261325 TGATCTGTAGCTTCAGTTGAATAGTC 58.739 38.462 18.55 7.25 36.85 2.59
4131 4284 5.967088 TCTGTAGCTTCAGTTGAATAGTCC 58.033 41.667 18.55 0.00 36.85 3.85
4132 4285 5.086104 TGTAGCTTCAGTTGAATAGTCCC 57.914 43.478 0.00 0.00 33.01 4.46
4133 4286 4.777896 TGTAGCTTCAGTTGAATAGTCCCT 59.222 41.667 0.00 0.00 33.01 4.20
4134 4287 4.479786 AGCTTCAGTTGAATAGTCCCTC 57.520 45.455 0.00 0.00 33.01 4.30
4135 4288 3.198853 AGCTTCAGTTGAATAGTCCCTCC 59.801 47.826 0.00 0.00 33.01 4.30
4136 4289 3.786635 CTTCAGTTGAATAGTCCCTCCG 58.213 50.000 0.00 0.00 33.01 4.63
4137 4290 2.816411 TCAGTTGAATAGTCCCTCCGT 58.184 47.619 0.00 0.00 0.00 4.69
4138 4291 3.170717 TCAGTTGAATAGTCCCTCCGTT 58.829 45.455 0.00 0.00 0.00 4.44
4139 4292 3.194968 TCAGTTGAATAGTCCCTCCGTTC 59.805 47.826 0.00 0.00 0.00 3.95
4140 4293 3.056107 CAGTTGAATAGTCCCTCCGTTCA 60.056 47.826 0.00 0.00 0.00 3.18
4141 4294 3.056035 AGTTGAATAGTCCCTCCGTTCAC 60.056 47.826 0.00 0.00 0.00 3.18
4142 4295 2.531771 TGAATAGTCCCTCCGTTCACA 58.468 47.619 0.00 0.00 0.00 3.58
4143 4296 2.901192 TGAATAGTCCCTCCGTTCACAA 59.099 45.455 0.00 0.00 0.00 3.33
4144 4297 3.325425 TGAATAGTCCCTCCGTTCACAAA 59.675 43.478 0.00 0.00 0.00 2.83
4145 4298 4.019681 TGAATAGTCCCTCCGTTCACAAAT 60.020 41.667 0.00 0.00 0.00 2.32
4146 4299 5.188163 TGAATAGTCCCTCCGTTCACAAATA 59.812 40.000 0.00 0.00 0.00 1.40
4147 4300 5.888982 ATAGTCCCTCCGTTCACAAATAT 57.111 39.130 0.00 0.00 0.00 1.28
4148 4301 6.989155 ATAGTCCCTCCGTTCACAAATATA 57.011 37.500 0.00 0.00 0.00 0.86
4149 4302 5.687166 AGTCCCTCCGTTCACAAATATAA 57.313 39.130 0.00 0.00 0.00 0.98
4150 4303 5.671493 AGTCCCTCCGTTCACAAATATAAG 58.329 41.667 0.00 0.00 0.00 1.73
4151 4304 5.424252 AGTCCCTCCGTTCACAAATATAAGA 59.576 40.000 0.00 0.00 0.00 2.10
4152 4305 6.099845 AGTCCCTCCGTTCACAAATATAAGAT 59.900 38.462 0.00 0.00 0.00 2.40
4153 4306 6.202954 GTCCCTCCGTTCACAAATATAAGATG 59.797 42.308 0.00 0.00 0.00 2.90
4154 4307 6.055588 CCCTCCGTTCACAAATATAAGATGT 58.944 40.000 0.00 0.00 0.00 3.06
4155 4308 6.542370 CCCTCCGTTCACAAATATAAGATGTT 59.458 38.462 0.00 0.00 0.00 2.71
4156 4309 7.067008 CCCTCCGTTCACAAATATAAGATGTTT 59.933 37.037 0.00 0.00 0.00 2.83
4157 4310 8.458843 CCTCCGTTCACAAATATAAGATGTTTT 58.541 33.333 0.00 0.00 0.00 2.43
4207 4360 9.520515 AGACTGGAATAAATGAACAAATACACT 57.479 29.630 0.00 0.00 0.00 3.55
4216 4369 8.568732 AAATGAACAAATACACTAAAACGTGG 57.431 30.769 0.00 0.00 39.19 4.94
4217 4370 5.512473 TGAACAAATACACTAAAACGTGGC 58.488 37.500 0.00 0.00 39.19 5.01
4218 4371 5.297278 TGAACAAATACACTAAAACGTGGCT 59.703 36.000 0.00 0.00 39.19 4.75
4219 4372 6.482641 TGAACAAATACACTAAAACGTGGCTA 59.517 34.615 0.00 0.00 39.19 3.93
4220 4373 7.173562 TGAACAAATACACTAAAACGTGGCTAT 59.826 33.333 0.00 0.00 39.19 2.97
4221 4374 7.443259 ACAAATACACTAAAACGTGGCTATT 57.557 32.000 0.00 0.00 39.19 1.73
4222 4375 8.550710 ACAAATACACTAAAACGTGGCTATTA 57.449 30.769 0.00 0.00 39.19 0.98
4223 4376 8.445493 ACAAATACACTAAAACGTGGCTATTAC 58.555 33.333 0.00 0.00 39.19 1.89
4224 4377 8.444715 CAAATACACTAAAACGTGGCTATTACA 58.555 33.333 0.00 0.00 39.19 2.41
4225 4378 8.726870 AATACACTAAAACGTGGCTATTACAT 57.273 30.769 0.00 0.00 39.19 2.29
4226 4379 6.657836 ACACTAAAACGTGGCTATTACATC 57.342 37.500 0.00 0.00 39.19 3.06
4227 4380 5.583457 ACACTAAAACGTGGCTATTACATCC 59.417 40.000 0.00 0.00 39.19 3.51
4228 4381 5.583061 CACTAAAACGTGGCTATTACATCCA 59.417 40.000 0.00 0.00 0.00 3.41
4229 4382 6.092944 CACTAAAACGTGGCTATTACATCCAA 59.907 38.462 0.00 0.00 0.00 3.53
4230 4383 6.826741 ACTAAAACGTGGCTATTACATCCAAT 59.173 34.615 0.00 0.00 0.00 3.16
4231 4384 6.524101 AAAACGTGGCTATTACATCCAATT 57.476 33.333 0.00 0.00 0.00 2.32
4232 4385 5.751243 AACGTGGCTATTACATCCAATTC 57.249 39.130 0.00 0.00 0.00 2.17
4233 4386 4.776349 ACGTGGCTATTACATCCAATTCA 58.224 39.130 0.00 0.00 0.00 2.57
4234 4387 4.816385 ACGTGGCTATTACATCCAATTCAG 59.184 41.667 0.00 0.00 0.00 3.02
4235 4388 5.056480 CGTGGCTATTACATCCAATTCAGA 58.944 41.667 0.00 0.00 0.00 3.27
4236 4389 5.527214 CGTGGCTATTACATCCAATTCAGAA 59.473 40.000 0.00 0.00 0.00 3.02
4237 4390 6.038161 CGTGGCTATTACATCCAATTCAGAAA 59.962 38.462 0.00 0.00 0.00 2.52
4238 4391 7.415095 CGTGGCTATTACATCCAATTCAGAAAA 60.415 37.037 0.00 0.00 0.00 2.29
4239 4392 8.250332 GTGGCTATTACATCCAATTCAGAAAAA 58.750 33.333 0.00 0.00 0.00 1.94
4270 4423 6.844696 GAGCATCTTATATTTGTGAACGGA 57.155 37.500 0.00 0.00 0.00 4.69
4271 4424 6.851222 AGCATCTTATATTTGTGAACGGAG 57.149 37.500 0.00 0.00 0.00 4.63
4272 4425 5.760253 AGCATCTTATATTTGTGAACGGAGG 59.240 40.000 0.00 0.00 0.00 4.30
4273 4426 5.049405 GCATCTTATATTTGTGAACGGAGGG 60.049 44.000 0.00 0.00 0.00 4.30
4274 4427 5.031066 TCTTATATTTGTGAACGGAGGGG 57.969 43.478 0.00 0.00 0.00 4.79
4275 4428 2.729028 ATATTTGTGAACGGAGGGGG 57.271 50.000 0.00 0.00 0.00 5.40
4276 4429 1.364269 TATTTGTGAACGGAGGGGGT 58.636 50.000 0.00 0.00 0.00 4.95
4277 4430 1.364269 ATTTGTGAACGGAGGGGGTA 58.636 50.000 0.00 0.00 0.00 3.69
4278 4431 0.397564 TTTGTGAACGGAGGGGGTAC 59.602 55.000 0.00 0.00 0.00 3.34
4279 4432 0.763604 TTGTGAACGGAGGGGGTACA 60.764 55.000 0.00 0.00 0.00 2.90
4280 4433 0.545787 TGTGAACGGAGGGGGTACAT 60.546 55.000 0.00 0.00 0.00 2.29
4281 4434 0.177373 GTGAACGGAGGGGGTACATC 59.823 60.000 0.00 0.00 0.00 3.06
4282 4435 0.252330 TGAACGGAGGGGGTACATCA 60.252 55.000 0.00 0.00 0.00 3.07
4283 4436 0.177373 GAACGGAGGGGGTACATCAC 59.823 60.000 0.00 0.00 0.00 3.06
4297 4450 3.996921 ACATCACCATTTCAGCTCTCT 57.003 42.857 0.00 0.00 0.00 3.10
4298 4451 4.298103 ACATCACCATTTCAGCTCTCTT 57.702 40.909 0.00 0.00 0.00 2.85
4299 4452 4.660168 ACATCACCATTTCAGCTCTCTTT 58.340 39.130 0.00 0.00 0.00 2.52
4300 4453 5.075493 ACATCACCATTTCAGCTCTCTTTT 58.925 37.500 0.00 0.00 0.00 2.27
4301 4454 5.537674 ACATCACCATTTCAGCTCTCTTTTT 59.462 36.000 0.00 0.00 0.00 1.94
4302 4455 5.695851 TCACCATTTCAGCTCTCTTTTTC 57.304 39.130 0.00 0.00 0.00 2.29
4303 4456 4.520492 TCACCATTTCAGCTCTCTTTTTCC 59.480 41.667 0.00 0.00 0.00 3.13
4304 4457 4.522022 CACCATTTCAGCTCTCTTTTTCCT 59.478 41.667 0.00 0.00 0.00 3.36
4305 4458 4.764308 ACCATTTCAGCTCTCTTTTTCCTC 59.236 41.667 0.00 0.00 0.00 3.71
4306 4459 5.008980 CCATTTCAGCTCTCTTTTTCCTCT 58.991 41.667 0.00 0.00 0.00 3.69
4307 4460 6.176183 CCATTTCAGCTCTCTTTTTCCTCTA 58.824 40.000 0.00 0.00 0.00 2.43
4308 4461 6.093357 CCATTTCAGCTCTCTTTTTCCTCTAC 59.907 42.308 0.00 0.00 0.00 2.59
4309 4462 4.810191 TCAGCTCTCTTTTTCCTCTACC 57.190 45.455 0.00 0.00 0.00 3.18
4310 4463 3.193691 TCAGCTCTCTTTTTCCTCTACCG 59.806 47.826 0.00 0.00 0.00 4.02
4311 4464 2.093921 AGCTCTCTTTTTCCTCTACCGC 60.094 50.000 0.00 0.00 0.00 5.68
4312 4465 2.894902 CTCTCTTTTTCCTCTACCGCC 58.105 52.381 0.00 0.00 0.00 6.13
4313 4466 2.233922 CTCTCTTTTTCCTCTACCGCCA 59.766 50.000 0.00 0.00 0.00 5.69
4314 4467 2.233922 TCTCTTTTTCCTCTACCGCCAG 59.766 50.000 0.00 0.00 0.00 4.85
4315 4468 1.975680 TCTTTTTCCTCTACCGCCAGT 59.024 47.619 0.00 0.00 0.00 4.00
4316 4469 2.370849 TCTTTTTCCTCTACCGCCAGTT 59.629 45.455 0.00 0.00 0.00 3.16
4317 4470 2.943036 TTTTCCTCTACCGCCAGTTT 57.057 45.000 0.00 0.00 0.00 2.66
4318 4471 4.040706 TCTTTTTCCTCTACCGCCAGTTTA 59.959 41.667 0.00 0.00 0.00 2.01
4319 4472 4.354893 TTTTCCTCTACCGCCAGTTTAA 57.645 40.909 0.00 0.00 0.00 1.52
4320 4473 4.354893 TTTCCTCTACCGCCAGTTTAAA 57.645 40.909 0.00 0.00 0.00 1.52
4321 4474 4.354893 TTCCTCTACCGCCAGTTTAAAA 57.645 40.909 0.00 0.00 0.00 1.52
4322 4475 4.563140 TCCTCTACCGCCAGTTTAAAAT 57.437 40.909 0.00 0.00 0.00 1.82
4323 4476 5.680594 TCCTCTACCGCCAGTTTAAAATA 57.319 39.130 0.00 0.00 0.00 1.40
4324 4477 6.243216 TCCTCTACCGCCAGTTTAAAATAT 57.757 37.500 0.00 0.00 0.00 1.28
4325 4478 6.655930 TCCTCTACCGCCAGTTTAAAATATT 58.344 36.000 0.00 0.00 0.00 1.28
4326 4479 7.114095 TCCTCTACCGCCAGTTTAAAATATTT 58.886 34.615 0.00 0.00 0.00 1.40
4327 4480 7.281549 TCCTCTACCGCCAGTTTAAAATATTTC 59.718 37.037 0.10 0.00 0.00 2.17
4328 4481 7.007313 TCTACCGCCAGTTTAAAATATTTCG 57.993 36.000 0.10 0.00 0.00 3.46
4329 4482 5.883503 ACCGCCAGTTTAAAATATTTCGA 57.116 34.783 0.10 0.00 0.00 3.71
4330 4483 5.875930 ACCGCCAGTTTAAAATATTTCGAG 58.124 37.500 0.10 0.00 0.00 4.04
4331 4484 5.413523 ACCGCCAGTTTAAAATATTTCGAGT 59.586 36.000 0.10 0.00 0.00 4.18
4332 4485 5.737290 CCGCCAGTTTAAAATATTTCGAGTG 59.263 40.000 0.10 4.20 0.00 3.51
4333 4486 5.227184 CGCCAGTTTAAAATATTTCGAGTGC 59.773 40.000 0.10 0.00 0.00 4.40
4334 4487 5.227184 GCCAGTTTAAAATATTTCGAGTGCG 59.773 40.000 0.10 0.00 39.35 5.34
4335 4488 5.737290 CCAGTTTAAAATATTTCGAGTGCGG 59.263 40.000 0.10 0.00 38.28 5.69
4336 4489 5.227184 CAGTTTAAAATATTTCGAGTGCGGC 59.773 40.000 0.10 0.00 38.28 6.53
4337 4490 5.123344 AGTTTAAAATATTTCGAGTGCGGCT 59.877 36.000 0.10 0.00 38.28 5.52
4338 4491 6.314400 AGTTTAAAATATTTCGAGTGCGGCTA 59.686 34.615 0.10 0.00 38.28 3.93
4339 4492 6.665474 TTAAAATATTTCGAGTGCGGCTAA 57.335 33.333 0.10 0.00 38.28 3.09
4340 4493 5.751243 AAAATATTTCGAGTGCGGCTAAT 57.249 34.783 0.10 0.00 38.28 1.73
4341 4494 4.992381 AATATTTCGAGTGCGGCTAATC 57.008 40.909 0.00 0.00 38.28 1.75
4342 4495 2.604046 ATTTCGAGTGCGGCTAATCT 57.396 45.000 0.00 0.00 38.28 2.40
4343 4496 1.640428 TTTCGAGTGCGGCTAATCTG 58.360 50.000 0.00 0.00 38.28 2.90
4349 4502 3.272334 GCGGCTAATCTGCACCCG 61.272 66.667 0.00 0.00 46.35 5.28
4350 4503 2.588877 CGGCTAATCTGCACCCGG 60.589 66.667 0.00 0.00 35.54 5.73
4351 4504 2.203209 GGCTAATCTGCACCCGGG 60.203 66.667 22.25 22.25 34.04 5.73
4352 4505 2.902343 GCTAATCTGCACCCGGGC 60.902 66.667 24.08 8.36 0.00 6.13
4353 4506 2.911143 CTAATCTGCACCCGGGCT 59.089 61.111 24.08 4.79 34.04 5.19
4354 4507 1.227674 CTAATCTGCACCCGGGCTC 60.228 63.158 24.08 13.62 34.04 4.70
4355 4508 1.971505 CTAATCTGCACCCGGGCTCA 61.972 60.000 24.08 17.97 34.04 4.26
4356 4509 1.971505 TAATCTGCACCCGGGCTCAG 61.972 60.000 27.84 27.84 34.04 3.35
4369 4522 4.694233 CTCAGCTGCACCCACGCT 62.694 66.667 9.47 0.00 0.00 5.07
4370 4523 4.254709 TCAGCTGCACCCACGCTT 62.255 61.111 9.47 0.00 0.00 4.68
4371 4524 2.358615 CAGCTGCACCCACGCTTA 60.359 61.111 0.00 0.00 0.00 3.09
4372 4525 2.046892 AGCTGCACCCACGCTTAG 60.047 61.111 1.02 0.00 0.00 2.18
4373 4526 2.047274 GCTGCACCCACGCTTAGA 60.047 61.111 0.00 0.00 0.00 2.10
4374 4527 1.671054 GCTGCACCCACGCTTAGAA 60.671 57.895 0.00 0.00 0.00 2.10
4375 4528 1.234615 GCTGCACCCACGCTTAGAAA 61.235 55.000 0.00 0.00 0.00 2.52
4376 4529 1.234821 CTGCACCCACGCTTAGAAAA 58.765 50.000 0.00 0.00 0.00 2.29
4377 4530 1.606668 CTGCACCCACGCTTAGAAAAA 59.393 47.619 0.00 0.00 0.00 1.94
4444 4597 6.978343 TTCTTGGTGGTAGATAATTTGACG 57.022 37.500 0.00 0.00 0.00 4.35
4445 4598 4.873827 TCTTGGTGGTAGATAATTTGACGC 59.126 41.667 0.00 0.00 0.00 5.19
4446 4599 3.191669 TGGTGGTAGATAATTTGACGCG 58.808 45.455 3.53 3.53 0.00 6.01
4447 4600 3.192466 GGTGGTAGATAATTTGACGCGT 58.808 45.455 13.85 13.85 0.00 6.01
4448 4601 3.000925 GGTGGTAGATAATTTGACGCGTG 59.999 47.826 20.70 0.00 0.00 5.34
4449 4602 3.861113 GTGGTAGATAATTTGACGCGTGA 59.139 43.478 20.70 4.74 0.00 4.35
4450 4603 4.026804 GTGGTAGATAATTTGACGCGTGAG 60.027 45.833 20.70 0.00 0.00 3.51
4451 4604 3.489785 GGTAGATAATTTGACGCGTGAGG 59.510 47.826 20.70 0.00 0.00 3.86
4452 4605 3.247006 AGATAATTTGACGCGTGAGGT 57.753 42.857 20.70 0.00 0.00 3.85
4453 4606 2.930040 AGATAATTTGACGCGTGAGGTG 59.070 45.455 20.70 0.00 0.00 4.00
4454 4607 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
4463 4616 2.909965 GTGAGGTGCGCCCCAAAA 60.910 61.111 12.68 0.00 34.57 2.44
4464 4617 2.117206 TGAGGTGCGCCCCAAAAT 59.883 55.556 12.68 0.00 34.57 1.82
4465 4618 1.532794 TGAGGTGCGCCCCAAAATT 60.533 52.632 12.68 0.00 34.57 1.82
4466 4619 1.215382 GAGGTGCGCCCCAAAATTC 59.785 57.895 12.68 0.00 34.57 2.17
4467 4620 1.531739 GAGGTGCGCCCCAAAATTCA 61.532 55.000 12.68 0.00 34.57 2.57
4468 4621 1.118356 AGGTGCGCCCCAAAATTCAA 61.118 50.000 12.68 0.00 34.57 2.69
4469 4622 0.948623 GGTGCGCCCCAAAATTCAAC 60.949 55.000 3.18 0.00 0.00 3.18
4470 4623 0.033366 GTGCGCCCCAAAATTCAACT 59.967 50.000 4.18 0.00 0.00 3.16
4471 4624 0.316841 TGCGCCCCAAAATTCAACTC 59.683 50.000 4.18 0.00 0.00 3.01
4472 4625 0.316841 GCGCCCCAAAATTCAACTCA 59.683 50.000 0.00 0.00 0.00 3.41
4473 4626 1.066929 GCGCCCCAAAATTCAACTCAT 60.067 47.619 0.00 0.00 0.00 2.90
4474 4627 2.612721 GCGCCCCAAAATTCAACTCATT 60.613 45.455 0.00 0.00 0.00 2.57
4475 4628 3.663025 CGCCCCAAAATTCAACTCATTT 58.337 40.909 0.00 0.00 0.00 2.32
4476 4629 3.432933 CGCCCCAAAATTCAACTCATTTG 59.567 43.478 0.00 0.00 36.42 2.32
4477 4630 4.640364 GCCCCAAAATTCAACTCATTTGA 58.360 39.130 0.00 0.00 42.83 2.69
4478 4631 4.692155 GCCCCAAAATTCAACTCATTTGAG 59.308 41.667 6.03 6.03 45.22 3.02
4479 4632 4.692155 CCCCAAAATTCAACTCATTTGAGC 59.308 41.667 7.48 0.00 45.22 4.26
4480 4633 5.299148 CCCAAAATTCAACTCATTTGAGCA 58.701 37.500 7.48 0.00 45.22 4.26
4481 4634 5.935789 CCCAAAATTCAACTCATTTGAGCAT 59.064 36.000 7.48 0.00 45.22 3.79
4482 4635 6.091713 CCCAAAATTCAACTCATTTGAGCATC 59.908 38.462 7.48 0.00 45.22 3.91
4483 4636 6.872020 CCAAAATTCAACTCATTTGAGCATCT 59.128 34.615 7.48 0.00 45.22 2.90
4484 4637 7.148639 CCAAAATTCAACTCATTTGAGCATCTG 60.149 37.037 7.48 1.37 45.22 2.90
4485 4638 6.829229 AATTCAACTCATTTGAGCATCTGA 57.171 33.333 7.48 3.49 45.22 3.27
4486 4639 5.874895 TTCAACTCATTTGAGCATCTGAG 57.125 39.130 7.48 7.75 45.22 3.35
4487 4640 3.688185 TCAACTCATTTGAGCATCTGAGC 59.312 43.478 7.48 0.00 45.79 4.26
4488 4641 3.345508 ACTCATTTGAGCATCTGAGCA 57.654 42.857 7.48 0.00 45.79 4.26
4489 4642 3.271729 ACTCATTTGAGCATCTGAGCAG 58.728 45.455 7.48 0.00 45.79 4.24
4490 4643 2.014857 TCATTTGAGCATCTGAGCAGC 58.985 47.619 0.00 0.00 36.85 5.25
4491 4644 2.017782 CATTTGAGCATCTGAGCAGCT 58.982 47.619 0.00 0.00 42.17 4.24
4495 4648 1.438399 AGCATCTGAGCAGCTCTCG 59.562 57.895 23.15 13.93 44.86 4.04
4497 4650 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
4498 4651 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
4499 4652 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
4500 4653 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
4501 4654 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
4502 4655 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 6.717540 AGACTACATGTGGATGTATCTAGACC 59.282 42.308 16.98 0.00 42.87 3.85
71 72 9.823647 AGAGAATTTAATACAGACTACATGTGG 57.176 33.333 9.11 8.41 32.02 4.17
119 123 9.067986 CAAAACCTCAACTAAATACTTTCTCCT 57.932 33.333 0.00 0.00 0.00 3.69
120 124 9.063615 TCAAAACCTCAACTAAATACTTTCTCC 57.936 33.333 0.00 0.00 0.00 3.71
166 170 2.162408 GCACCTCCTGCATTAACTCAAC 59.838 50.000 0.00 0.00 46.29 3.18
183 187 0.661187 TTTCTCGTGTACGTCGCACC 60.661 55.000 14.82 1.81 40.80 5.01
196 200 6.741358 GTCCCTAATTCGTTTGATTTTTCTCG 59.259 38.462 0.00 0.00 0.00 4.04
215 219 0.696501 GCCTTCACCCTTTGTCCCTA 59.303 55.000 0.00 0.00 0.00 3.53
224 228 1.228154 GAACGTTGGCCTTCACCCT 60.228 57.895 5.00 0.00 0.00 4.34
235 239 3.610677 GTGGAGTTGGTTTTTGAACGTTG 59.389 43.478 5.00 0.00 0.00 4.10
236 240 3.508402 AGTGGAGTTGGTTTTTGAACGTT 59.492 39.130 0.00 0.00 0.00 3.99
241 245 7.057894 ACTGTTATAGTGGAGTTGGTTTTTGA 58.942 34.615 0.00 0.00 38.49 2.69
274 278 6.472887 TGATCCGGTCTTACAATCTCTTTTT 58.527 36.000 0.00 0.00 0.00 1.94
277 281 5.363868 TCATGATCCGGTCTTACAATCTCTT 59.636 40.000 0.00 0.00 0.00 2.85
279 283 5.201713 TCATGATCCGGTCTTACAATCTC 57.798 43.478 0.00 0.00 0.00 2.75
281 285 4.153117 GCATCATGATCCGGTCTTACAATC 59.847 45.833 4.86 0.00 0.00 2.67
285 289 3.062763 CAGCATCATGATCCGGTCTTAC 58.937 50.000 4.86 0.00 0.00 2.34
301 305 2.590821 GTTATGGCTTCATCCCAGCAT 58.409 47.619 0.00 0.00 39.21 3.79
306 310 3.117888 TCTCTTGGTTATGGCTTCATCCC 60.118 47.826 0.00 0.00 32.59 3.85
308 312 4.517285 TGTCTCTTGGTTATGGCTTCATC 58.483 43.478 0.00 0.00 32.59 2.92
330 334 3.931907 TCGATCATGGGAAATGGTTCT 57.068 42.857 0.00 0.00 33.92 3.01
335 339 4.156664 GAGCATTCGATCATGGGAAATG 57.843 45.455 0.00 0.20 0.00 2.32
353 357 0.099082 CGGTCAGTAAGAGGTCGAGC 59.901 60.000 6.48 6.48 0.00 5.03
358 362 4.401837 GGTTAGATTCGGTCAGTAAGAGGT 59.598 45.833 0.00 0.00 0.00 3.85
362 366 4.401519 TCTGGGTTAGATTCGGTCAGTAAG 59.598 45.833 0.00 0.00 0.00 2.34
367 371 2.816411 AGTCTGGGTTAGATTCGGTCA 58.184 47.619 0.00 0.00 37.83 4.02
370 374 4.184629 CAAGAAGTCTGGGTTAGATTCGG 58.815 47.826 0.00 0.00 37.83 4.30
381 385 6.072119 GGTTAAATACCAACCAAGAAGTCTGG 60.072 42.308 0.00 0.00 46.92 3.86
490 496 9.134734 GACAATATTTTTCAGCGAAATTAACCA 57.865 29.630 4.91 0.00 31.34 3.67
497 503 6.734137 ACACAGACAATATTTTTCAGCGAAA 58.266 32.000 0.00 0.55 0.00 3.46
500 506 6.373779 AGAACACAGACAATATTTTTCAGCG 58.626 36.000 0.00 0.00 0.00 5.18
584 591 5.353111 TGCCAGCATTTATGACATCAATTG 58.647 37.500 0.00 0.00 0.00 2.32
699 718 2.048127 GCAGCGACGGGAACTCTT 60.048 61.111 0.00 0.00 0.00 2.85
701 720 4.719369 ACGCAGCGACGGGAACTC 62.719 66.667 24.65 0.00 37.37 3.01
755 780 0.811281 CTTCCTTTTGGGCGATGGAC 59.189 55.000 0.00 0.00 40.87 4.02
756 781 0.965363 GCTTCCTTTTGGGCGATGGA 60.965 55.000 0.00 0.00 40.87 3.41
764 789 2.157738 CTGGTCTCAGCTTCCTTTTGG 58.842 52.381 0.00 0.00 36.04 3.28
862 897 1.013596 CAAATAATGGCGCTCGTCCA 58.986 50.000 7.64 0.00 38.09 4.02
866 904 2.146342 AGGATCAAATAATGGCGCTCG 58.854 47.619 7.64 0.00 0.00 5.03
954 993 3.522731 CTCCCTCGCGCTACTGCT 61.523 66.667 5.56 0.00 36.97 4.24
973 1012 3.802948 GAATCTTTCGGCCTCTCAGTA 57.197 47.619 0.00 0.00 0.00 2.74
1026 1065 1.227674 GCCGGCGAGGATGATCTTT 60.228 57.895 12.58 0.00 45.00 2.52
1133 1172 1.614226 TTGTTAGGTCCGGGGAGGG 60.614 63.158 0.00 0.00 41.52 4.30
1143 1182 3.910627 AGAGTGGGATTCAGTTGTTAGGT 59.089 43.478 0.00 0.00 0.00 3.08
1146 1185 3.830178 TCGAGAGTGGGATTCAGTTGTTA 59.170 43.478 0.00 0.00 0.00 2.41
1147 1186 2.632996 TCGAGAGTGGGATTCAGTTGTT 59.367 45.455 0.00 0.00 0.00 2.83
1148 1187 2.248248 TCGAGAGTGGGATTCAGTTGT 58.752 47.619 0.00 0.00 0.00 3.32
1150 1189 3.118592 GGAATCGAGAGTGGGATTCAGTT 60.119 47.826 13.75 0.00 46.53 3.16
1151 1190 2.432510 GGAATCGAGAGTGGGATTCAGT 59.567 50.000 13.75 0.00 46.53 3.41
1152 1191 2.697751 AGGAATCGAGAGTGGGATTCAG 59.302 50.000 13.75 0.00 46.53 3.02
1153 1192 2.752030 AGGAATCGAGAGTGGGATTCA 58.248 47.619 13.75 0.00 46.53 2.57
1154 1193 3.493524 GGAAGGAATCGAGAGTGGGATTC 60.494 52.174 5.44 5.44 44.88 2.52
1160 1204 3.549827 CGATCAGGAAGGAATCGAGAGTG 60.550 52.174 0.00 0.00 36.95 3.51
1165 1209 2.099263 GTGACGATCAGGAAGGAATCGA 59.901 50.000 10.57 0.00 38.05 3.59
1182 1226 2.657372 CGAAAGTAAGAGCGTCAGTGAC 59.343 50.000 13.56 13.56 0.00 3.67
1192 1236 2.227754 GCAAACGGCGAAAGTAAGAG 57.772 50.000 16.62 0.00 0.00 2.85
1203 1247 0.721483 CGAAAGACGAAGCAAACGGC 60.721 55.000 0.00 0.00 45.77 5.68
1204 1248 0.721483 GCGAAAGACGAAGCAAACGG 60.721 55.000 0.00 0.00 45.77 4.44
1205 1249 0.042535 TGCGAAAGACGAAGCAAACG 60.043 50.000 0.00 0.00 45.77 3.60
1206 1250 1.660333 CCTGCGAAAGACGAAGCAAAC 60.660 52.381 0.00 0.00 45.57 2.93
1207 1251 0.586319 CCTGCGAAAGACGAAGCAAA 59.414 50.000 0.00 0.00 45.57 3.68
1208 1252 1.227999 CCCTGCGAAAGACGAAGCAA 61.228 55.000 0.00 0.00 45.57 3.91
1209 1253 1.667830 CCCTGCGAAAGACGAAGCA 60.668 57.895 0.00 0.00 45.57 3.91
1210 1254 2.391389 CCCCTGCGAAAGACGAAGC 61.391 63.158 0.00 0.00 45.57 3.86
1211 1255 0.108138 ATCCCCTGCGAAAGACGAAG 60.108 55.000 0.00 0.00 46.41 3.79
1212 1256 0.391130 CATCCCCTGCGAAAGACGAA 60.391 55.000 0.00 0.00 45.77 3.85
1213 1257 1.218047 CATCCCCTGCGAAAGACGA 59.782 57.895 0.00 0.00 45.77 4.20
1214 1258 1.815421 CCATCCCCTGCGAAAGACG 60.815 63.158 0.00 0.00 45.66 4.18
1215 1259 2.115291 GCCATCCCCTGCGAAAGAC 61.115 63.158 0.00 0.00 0.00 3.01
1216 1260 2.272146 GCCATCCCCTGCGAAAGA 59.728 61.111 0.00 0.00 0.00 2.52
1254 1300 2.258591 CCCGTGTCTGTCAGGTCG 59.741 66.667 0.00 3.05 0.00 4.79
1494 1540 3.834231 CACAAGATTTGATTTGGGGGAGT 59.166 43.478 0.00 0.00 0.00 3.85
1497 1543 3.615224 CCACAAGATTTGATTTGGGGG 57.385 47.619 0.00 0.00 42.83 5.40
1516 1569 3.010420 GTCAGGAAGGTTCAGCATTACC 58.990 50.000 0.00 0.00 34.54 2.85
1539 1592 5.400485 GCACAAGAAGTTGCATCAAGTTTAG 59.600 40.000 0.00 0.00 37.16 1.85
1684 1737 2.436646 AACGGCGCCTTCAGGATG 60.437 61.111 26.68 8.67 37.39 3.51
1685 1738 2.436646 CAACGGCGCCTTCAGGAT 60.437 61.111 26.68 0.00 37.39 3.24
1719 1772 4.017222 TCAAGATGATCCTTCCCCAACAAT 60.017 41.667 0.00 0.00 0.00 2.71
1779 1832 1.136305 CCAGAAGGCTTGCCATGAATG 59.864 52.381 14.54 5.14 0.00 2.67
1851 1904 6.476896 CATTTTGGCGCGAATTGAAATATTT 58.523 32.000 12.10 0.00 0.00 1.40
1855 1908 2.094099 GCATTTTGGCGCGAATTGAAAT 59.906 40.909 12.10 5.43 0.00 2.17
1887 1940 8.737168 TGATTTCTCCACAGGAAATATTGTAG 57.263 34.615 0.00 0.00 41.59 2.74
1888 1941 8.328758 ACTGATTTCTCCACAGGAAATATTGTA 58.671 33.333 0.00 0.00 41.59 2.41
1889 1942 7.177878 ACTGATTTCTCCACAGGAAATATTGT 58.822 34.615 0.00 0.00 41.59 2.71
1890 1943 7.636150 ACTGATTTCTCCACAGGAAATATTG 57.364 36.000 0.00 0.00 41.59 1.90
1891 1944 9.927081 AATACTGATTTCTCCACAGGAAATATT 57.073 29.630 0.00 0.00 41.59 1.28
1892 1945 9.347240 CAATACTGATTTCTCCACAGGAAATAT 57.653 33.333 0.00 0.00 41.59 1.28
1893 1946 8.328758 ACAATACTGATTTCTCCACAGGAAATA 58.671 33.333 0.00 0.00 41.59 1.40
1894 1947 7.121759 CACAATACTGATTTCTCCACAGGAAAT 59.878 37.037 0.00 0.00 43.40 2.17
1895 1948 6.430925 CACAATACTGATTTCTCCACAGGAAA 59.569 38.462 0.00 0.00 37.15 3.13
1896 1949 5.939883 CACAATACTGATTTCTCCACAGGAA 59.060 40.000 0.00 0.00 36.17 3.36
1897 1950 5.491070 CACAATACTGATTTCTCCACAGGA 58.509 41.667 0.00 0.00 36.17 3.86
1898 1951 4.637534 CCACAATACTGATTTCTCCACAGG 59.362 45.833 0.00 0.00 36.17 4.00
1899 1952 5.248640 ACCACAATACTGATTTCTCCACAG 58.751 41.667 0.00 0.00 37.62 3.66
1900 1953 5.241403 ACCACAATACTGATTTCTCCACA 57.759 39.130 0.00 0.00 0.00 4.17
1901 1954 7.865706 ATAACCACAATACTGATTTCTCCAC 57.134 36.000 0.00 0.00 0.00 4.02
1902 1955 9.559732 CATATAACCACAATACTGATTTCTCCA 57.440 33.333 0.00 0.00 0.00 3.86
1903 1956 9.561069 ACATATAACCACAATACTGATTTCTCC 57.439 33.333 0.00 0.00 0.00 3.71
1905 1958 9.342308 CCACATATAACCACAATACTGATTTCT 57.658 33.333 0.00 0.00 0.00 2.52
1906 1959 9.120538 ACCACATATAACCACAATACTGATTTC 57.879 33.333 0.00 0.00 0.00 2.17
1907 1960 9.474313 AACCACATATAACCACAATACTGATTT 57.526 29.630 0.00 0.00 0.00 2.17
1908 1961 8.902806 CAACCACATATAACCACAATACTGATT 58.097 33.333 0.00 0.00 0.00 2.57
1909 1962 8.052748 ACAACCACATATAACCACAATACTGAT 58.947 33.333 0.00 0.00 0.00 2.90
1910 1963 7.398829 ACAACCACATATAACCACAATACTGA 58.601 34.615 0.00 0.00 0.00 3.41
1911 1964 7.624360 ACAACCACATATAACCACAATACTG 57.376 36.000 0.00 0.00 0.00 2.74
1912 1965 8.644374 AAACAACCACATATAACCACAATACT 57.356 30.769 0.00 0.00 0.00 2.12
1913 1966 8.516234 TGAAACAACCACATATAACCACAATAC 58.484 33.333 0.00 0.00 0.00 1.89
1914 1967 8.637196 TGAAACAACCACATATAACCACAATA 57.363 30.769 0.00 0.00 0.00 1.90
1915 1968 7.531857 TGAAACAACCACATATAACCACAAT 57.468 32.000 0.00 0.00 0.00 2.71
1916 1969 6.961360 TGAAACAACCACATATAACCACAA 57.039 33.333 0.00 0.00 0.00 3.33
1917 1970 6.717084 TCATGAAACAACCACATATAACCACA 59.283 34.615 0.00 0.00 0.00 4.17
1918 1971 7.151999 TCATGAAACAACCACATATAACCAC 57.848 36.000 0.00 0.00 0.00 4.16
1919 1972 7.309499 GGTTCATGAAACAACCACATATAACCA 60.309 37.037 18.74 0.00 41.65 3.67
1920 1973 7.033185 GGTTCATGAAACAACCACATATAACC 58.967 38.462 18.74 2.54 41.65 2.85
1921 1974 7.754924 CAGGTTCATGAAACAACCACATATAAC 59.245 37.037 24.89 0.49 44.10 1.89
1922 1975 7.667635 TCAGGTTCATGAAACAACCACATATAA 59.332 33.333 24.89 0.00 44.10 0.98
1923 1976 7.171653 TCAGGTTCATGAAACAACCACATATA 58.828 34.615 24.89 0.00 44.10 0.86
1924 1977 6.009589 TCAGGTTCATGAAACAACCACATAT 58.990 36.000 24.89 0.00 44.10 1.78
1925 1978 5.380900 TCAGGTTCATGAAACAACCACATA 58.619 37.500 24.89 0.90 44.10 2.29
1926 1979 4.214310 TCAGGTTCATGAAACAACCACAT 58.786 39.130 24.89 0.00 44.10 3.21
1927 1980 3.625853 TCAGGTTCATGAAACAACCACA 58.374 40.909 24.89 3.98 44.10 4.17
1928 1981 4.647424 TTCAGGTTCATGAAACAACCAC 57.353 40.909 24.89 4.59 44.10 4.16
1929 1982 6.718912 TCATATTCAGGTTCATGAAACAACCA 59.281 34.615 24.89 6.69 44.10 3.67
1930 1983 7.094205 ACTCATATTCAGGTTCATGAAACAACC 60.094 37.037 24.89 15.50 42.21 3.77
1931 1984 7.820648 ACTCATATTCAGGTTCATGAAACAAC 58.179 34.615 24.89 6.49 42.21 3.32
1932 1985 9.685276 ATACTCATATTCAGGTTCATGAAACAA 57.315 29.630 24.89 12.08 42.21 2.83
1933 1986 9.685276 AATACTCATATTCAGGTTCATGAAACA 57.315 29.630 24.89 5.34 42.21 2.83
1936 1989 9.551734 CAGAATACTCATATTCAGGTTCATGAA 57.448 33.333 3.38 3.38 46.38 2.57
1937 1990 8.708378 ACAGAATACTCATATTCAGGTTCATGA 58.292 33.333 9.17 0.00 46.38 3.07
1938 1991 8.899427 ACAGAATACTCATATTCAGGTTCATG 57.101 34.615 9.17 0.00 46.38 3.07
1944 1997 9.613957 CGTACTTACAGAATACTCATATTCAGG 57.386 37.037 9.17 4.31 46.38 3.86
1968 2021 9.437045 CACTTTACCGATTTAAACTTTTAACGT 57.563 29.630 0.00 0.00 32.77 3.99
1969 2022 9.437045 ACACTTTACCGATTTAAACTTTTAACG 57.563 29.630 0.00 0.00 32.77 3.18
1972 2025 9.934190 GACACACTTTACCGATTTAAACTTTTA 57.066 29.630 0.00 0.00 0.00 1.52
1973 2026 7.916977 GGACACACTTTACCGATTTAAACTTTT 59.083 33.333 0.00 0.00 0.00 2.27
1974 2027 7.420002 GGACACACTTTACCGATTTAAACTTT 58.580 34.615 0.00 0.00 0.00 2.66
1975 2028 6.016860 GGGACACACTTTACCGATTTAAACTT 60.017 38.462 0.00 0.00 0.00 2.66
1976 2029 5.471116 GGGACACACTTTACCGATTTAAACT 59.529 40.000 0.00 0.00 0.00 2.66
1977 2030 5.239087 TGGGACACACTTTACCGATTTAAAC 59.761 40.000 0.00 0.00 0.00 2.01
1978 2031 5.374921 TGGGACACACTTTACCGATTTAAA 58.625 37.500 0.00 0.00 0.00 1.52
1979 2032 4.970711 TGGGACACACTTTACCGATTTAA 58.029 39.130 0.00 0.00 0.00 1.52
1980 2033 4.620589 TGGGACACACTTTACCGATTTA 57.379 40.909 0.00 0.00 0.00 1.40
1981 2034 3.495434 TGGGACACACTTTACCGATTT 57.505 42.857 0.00 0.00 0.00 2.17
1996 2049 5.594317 ACATTTAGTTGGCAATAGATGGGAC 59.406 40.000 1.92 0.00 0.00 4.46
1997 2050 5.765510 ACATTTAGTTGGCAATAGATGGGA 58.234 37.500 1.92 0.00 0.00 4.37
1998 2051 5.593909 TGACATTTAGTTGGCAATAGATGGG 59.406 40.000 1.92 0.00 29.64 4.00
1999 2052 6.698008 TGACATTTAGTTGGCAATAGATGG 57.302 37.500 1.92 0.00 29.64 3.51
2000 2053 6.694411 GCTTGACATTTAGTTGGCAATAGATG 59.306 38.462 1.92 10.11 43.48 2.90
2001 2054 6.183360 GGCTTGACATTTAGTTGGCAATAGAT 60.183 38.462 1.92 0.00 43.48 1.98
2002 2055 5.125417 GGCTTGACATTTAGTTGGCAATAGA 59.875 40.000 1.92 0.00 43.48 1.98
2003 2056 5.126061 AGGCTTGACATTTAGTTGGCAATAG 59.874 40.000 1.92 0.00 43.48 1.73
2004 2057 5.016173 AGGCTTGACATTTAGTTGGCAATA 58.984 37.500 1.92 0.00 43.48 1.90
2005 2058 3.834231 AGGCTTGACATTTAGTTGGCAAT 59.166 39.130 1.92 0.00 43.48 3.56
2006 2059 3.230134 AGGCTTGACATTTAGTTGGCAA 58.770 40.909 0.00 0.00 42.30 4.52
2007 2060 2.875296 AGGCTTGACATTTAGTTGGCA 58.125 42.857 0.00 0.00 31.09 4.92
2008 2061 3.507622 AGAAGGCTTGACATTTAGTTGGC 59.492 43.478 3.46 0.00 0.00 4.52
2009 2062 4.082571 CCAGAAGGCTTGACATTTAGTTGG 60.083 45.833 3.46 0.00 0.00 3.77
2010 2063 5.051891 CCAGAAGGCTTGACATTTAGTTG 57.948 43.478 3.46 0.00 0.00 3.16
2025 2078 0.109597 GCGTTGTCAATGCCAGAAGG 60.110 55.000 17.49 0.00 37.44 3.46
2026 2079 0.877071 AGCGTTGTCAATGCCAGAAG 59.123 50.000 23.20 0.00 44.49 2.85
2027 2080 0.592637 CAGCGTTGTCAATGCCAGAA 59.407 50.000 23.20 0.00 44.49 3.02
2028 2081 0.534877 ACAGCGTTGTCAATGCCAGA 60.535 50.000 23.20 0.00 44.49 3.86
2029 2082 1.951510 ACAGCGTTGTCAATGCCAG 59.048 52.632 23.20 18.63 44.49 4.85
2030 2083 4.155950 ACAGCGTTGTCAATGCCA 57.844 50.000 23.20 0.00 44.49 4.92
2038 2091 0.657840 GAAAGTGCTGACAGCGTTGT 59.342 50.000 22.00 3.93 46.26 3.32
2039 2092 0.383491 CGAAAGTGCTGACAGCGTTG 60.383 55.000 22.00 7.83 46.26 4.10
2040 2093 1.498865 CCGAAAGTGCTGACAGCGTT 61.499 55.000 22.00 14.95 46.26 4.84
2041 2094 1.956170 CCGAAAGTGCTGACAGCGT 60.956 57.895 22.00 9.54 46.26 5.07
2042 2095 0.666274 TACCGAAAGTGCTGACAGCG 60.666 55.000 22.00 8.65 46.26 5.18
2043 2096 1.394917 CATACCGAAAGTGCTGACAGC 59.605 52.381 20.86 20.86 42.82 4.40
2044 2097 2.688507 ACATACCGAAAGTGCTGACAG 58.311 47.619 0.00 0.00 0.00 3.51
2045 2098 2.805671 CAACATACCGAAAGTGCTGACA 59.194 45.455 0.00 0.00 0.00 3.58
2046 2099 2.806244 ACAACATACCGAAAGTGCTGAC 59.194 45.455 0.00 0.00 0.00 3.51
2047 2100 3.120321 ACAACATACCGAAAGTGCTGA 57.880 42.857 0.00 0.00 0.00 4.26
2048 2101 3.364964 GGAACAACATACCGAAAGTGCTG 60.365 47.826 0.00 0.00 0.00 4.41
2049 2102 2.812011 GGAACAACATACCGAAAGTGCT 59.188 45.455 0.00 0.00 0.00 4.40
2050 2103 2.812011 AGGAACAACATACCGAAAGTGC 59.188 45.455 0.00 0.00 0.00 4.40
2051 2104 4.315803 AGAGGAACAACATACCGAAAGTG 58.684 43.478 0.00 0.00 0.00 3.16
2052 2105 4.618920 AGAGGAACAACATACCGAAAGT 57.381 40.909 0.00 0.00 0.00 2.66
2053 2106 4.994852 TCAAGAGGAACAACATACCGAAAG 59.005 41.667 0.00 0.00 0.00 2.62
2054 2107 4.963373 TCAAGAGGAACAACATACCGAAA 58.037 39.130 0.00 0.00 0.00 3.46
2055 2108 4.610605 TCAAGAGGAACAACATACCGAA 57.389 40.909 0.00 0.00 0.00 4.30
2056 2109 4.819105 ATCAAGAGGAACAACATACCGA 57.181 40.909 0.00 0.00 0.00 4.69
2057 2110 4.094887 CCAATCAAGAGGAACAACATACCG 59.905 45.833 0.00 0.00 0.00 4.02
2058 2111 5.010282 ACCAATCAAGAGGAACAACATACC 58.990 41.667 0.00 0.00 0.00 2.73
2059 2112 6.575162 AACCAATCAAGAGGAACAACATAC 57.425 37.500 0.00 0.00 0.00 2.39
2060 2113 7.685481 TCTAACCAATCAAGAGGAACAACATA 58.315 34.615 0.00 0.00 0.00 2.29
2061 2114 6.542821 TCTAACCAATCAAGAGGAACAACAT 58.457 36.000 0.00 0.00 0.00 2.71
2062 2115 5.935945 TCTAACCAATCAAGAGGAACAACA 58.064 37.500 0.00 0.00 0.00 3.33
2063 2116 6.877611 TTCTAACCAATCAAGAGGAACAAC 57.122 37.500 0.00 0.00 0.00 3.32
2064 2117 7.461749 AGATTCTAACCAATCAAGAGGAACAA 58.538 34.615 0.00 0.00 35.51 2.83
2065 2118 7.020827 AGATTCTAACCAATCAAGAGGAACA 57.979 36.000 0.00 0.00 35.51 3.18
2066 2119 7.929941 AAGATTCTAACCAATCAAGAGGAAC 57.070 36.000 0.00 0.00 35.51 3.62
2067 2120 8.163408 TGAAAGATTCTAACCAATCAAGAGGAA 58.837 33.333 0.00 0.00 35.51 3.36
2068 2121 7.689299 TGAAAGATTCTAACCAATCAAGAGGA 58.311 34.615 0.00 0.00 35.51 3.71
2069 2122 7.928307 TGAAAGATTCTAACCAATCAAGAGG 57.072 36.000 0.00 0.00 35.51 3.69
2072 2125 9.282247 CGAATTGAAAGATTCTAACCAATCAAG 57.718 33.333 7.90 2.38 35.51 3.02
2073 2126 7.754924 GCGAATTGAAAGATTCTAACCAATCAA 59.245 33.333 7.90 0.00 35.51 2.57
2074 2127 7.250569 GCGAATTGAAAGATTCTAACCAATCA 58.749 34.615 7.90 0.00 35.51 2.57
2075 2128 6.412072 CGCGAATTGAAAGATTCTAACCAATC 59.588 38.462 0.00 0.00 34.58 2.67
2076 2129 6.258160 CGCGAATTGAAAGATTCTAACCAAT 58.742 36.000 0.00 0.00 34.58 3.16
2077 2130 5.627172 CGCGAATTGAAAGATTCTAACCAA 58.373 37.500 0.00 0.00 34.58 3.67
2078 2131 4.436852 GCGCGAATTGAAAGATTCTAACCA 60.437 41.667 12.10 0.00 34.58 3.67
2079 2132 4.029043 GCGCGAATTGAAAGATTCTAACC 58.971 43.478 12.10 0.00 34.58 2.85
2131 2187 6.879400 ACCTCAATACTGATTTCTCCACTAC 58.121 40.000 0.00 0.00 0.00 2.73
2141 2197 9.342308 CAACCACATATAACCTCAATACTGATT 57.658 33.333 0.00 0.00 0.00 2.57
2164 2220 6.431234 ACTGAGGAATAGGTTCATGAAACAAC 59.569 38.462 24.89 12.23 39.81 3.32
2187 2243 2.203337 TTCAAAGGCAGCGGCACT 60.203 55.556 11.88 2.39 43.71 4.40
2188 2244 2.050077 GTTCAAAGGCAGCGGCAC 60.050 61.111 11.88 0.00 43.71 5.01
2189 2245 1.462731 AATGTTCAAAGGCAGCGGCA 61.463 50.000 11.88 0.00 43.71 5.69
2191 2247 3.296322 TTTAATGTTCAAAGGCAGCGG 57.704 42.857 0.00 0.00 0.00 5.52
2203 2259 9.902196 CAGTTACCGATTTAACCTTTTAATGTT 57.098 29.630 0.00 0.00 33.11 2.71
2206 2262 7.395206 AGGCAGTTACCGATTTAACCTTTTAAT 59.605 33.333 0.00 0.00 33.11 1.40
2214 2270 6.673154 ATAACAGGCAGTTACCGATTTAAC 57.327 37.500 4.51 0.00 44.95 2.01
2223 2279 3.506067 AGTTGGCAATAACAGGCAGTTAC 59.494 43.478 1.92 0.00 44.95 2.50
2224 2280 3.761897 AGTTGGCAATAACAGGCAGTTA 58.238 40.909 1.92 4.90 46.10 2.24
2225 2281 2.597455 AGTTGGCAATAACAGGCAGTT 58.403 42.857 1.92 0.00 42.75 3.16
2298 2355 6.429385 GTGAGATTTTCATGACTGAACTCCTT 59.571 38.462 0.00 0.00 41.05 3.36
2303 2360 4.142816 CGGGTGAGATTTTCATGACTGAAC 60.143 45.833 0.00 0.00 41.05 3.18
2307 2364 3.244561 ACACGGGTGAGATTTTCATGACT 60.245 43.478 5.71 0.00 38.29 3.41
2313 2370 4.215399 TGAAATGACACGGGTGAGATTTTC 59.785 41.667 0.00 0.00 30.77 2.29
2314 2371 4.141287 TGAAATGACACGGGTGAGATTTT 58.859 39.130 0.00 0.00 30.77 1.82
2315 2372 3.750371 TGAAATGACACGGGTGAGATTT 58.250 40.909 0.00 8.71 32.13 2.17
2316 2373 3.417069 TGAAATGACACGGGTGAGATT 57.583 42.857 0.00 0.00 0.00 2.40
2317 2374 3.634397 ATGAAATGACACGGGTGAGAT 57.366 42.857 0.00 0.00 0.00 2.75
2318 2375 3.513912 AGTATGAAATGACACGGGTGAGA 59.486 43.478 0.00 0.00 0.00 3.27
2319 2376 3.861840 AGTATGAAATGACACGGGTGAG 58.138 45.455 0.00 0.00 0.00 3.51
2320 2377 3.973206 AGTATGAAATGACACGGGTGA 57.027 42.857 0.00 0.00 0.00 4.02
2321 2378 5.006153 TCTAGTATGAAATGACACGGGTG 57.994 43.478 0.00 0.00 0.00 4.61
2322 2379 5.670792 TTCTAGTATGAAATGACACGGGT 57.329 39.130 0.00 0.00 0.00 5.28
2323 2380 6.338146 TCTTTCTAGTATGAAATGACACGGG 58.662 40.000 0.00 0.00 35.68 5.28
2324 2381 7.923344 AGATCTTTCTAGTATGAAATGACACGG 59.077 37.037 0.00 0.00 35.68 4.94
2325 2382 8.864069 AGATCTTTCTAGTATGAAATGACACG 57.136 34.615 0.00 0.00 35.68 4.49
2392 2450 9.120538 GTAGCAGAAGTATTTAAATCCCAATGA 57.879 33.333 3.39 0.00 0.00 2.57
2410 2468 5.450137 GCTTCCTAATAGTCACGTAGCAGAA 60.450 44.000 0.00 0.00 0.00 3.02
2415 2473 6.073327 TCATGCTTCCTAATAGTCACGTAG 57.927 41.667 0.00 0.00 0.00 3.51
2569 2627 1.302832 GGAAGCCATAGCATCGGGG 60.303 63.158 0.00 0.00 43.56 5.73
2686 2744 2.941720 GTTCATCTCCATGAGTTCTGCC 59.058 50.000 0.00 0.00 40.28 4.85
2737 2795 5.235186 CAGCACGGTTTCTATAGAAGAATGG 59.765 44.000 14.63 7.89 43.75 3.16
2888 2946 7.062322 TGATGTGCTGGATCTATGGTATTTTT 58.938 34.615 0.00 0.00 0.00 1.94
2889 2947 6.604171 TGATGTGCTGGATCTATGGTATTTT 58.396 36.000 0.00 0.00 0.00 1.82
2909 2967 9.136952 GAAGAAATCAACTGAAAGGAAATGATG 57.863 33.333 0.00 0.00 39.30 3.07
3022 3080 4.773323 AGCTTTTACTGGCAAATCACTC 57.227 40.909 0.00 0.00 0.00 3.51
3024 3082 5.880054 TCTAGCTTTTACTGGCAAATCAC 57.120 39.130 0.00 0.00 0.00 3.06
3052 3110 8.128582 TCTTCACATGTAAAAATGTCAAGTGAC 58.871 33.333 0.00 4.43 39.08 3.67
3054 3112 9.467258 AATCTTCACATGTAAAAATGTCAAGTG 57.533 29.630 0.00 0.00 39.08 3.16
3153 3212 7.441157 TCTTGACAAGTACAAACCATCAGTAAG 59.559 37.037 14.75 0.00 0.00 2.34
3208 3350 4.781934 ACAGACCTATTCATTAAGTGGGC 58.218 43.478 0.00 0.00 0.00 5.36
3242 3384 5.946377 ACAAGAACTCTGAAAGTCTTGGTTT 59.054 36.000 20.04 5.59 41.91 3.27
3251 3393 4.999950 ACCAGCATACAAGAACTCTGAAAG 59.000 41.667 0.00 0.00 0.00 2.62
3257 3399 7.414540 CCAGATTAAACCAGCATACAAGAACTC 60.415 40.741 0.00 0.00 0.00 3.01
3527 3669 4.887748 AGTGTACAACATCTCCACTGAAG 58.112 43.478 0.00 0.00 35.20 3.02
3642 3784 3.503363 ACAACAACAATCATGCGACTGAT 59.497 39.130 0.00 0.00 37.47 2.90
3831 3982 5.638657 TCAATGATACCAAAACTGCAAATGC 59.361 36.000 0.00 0.00 42.50 3.56
3848 3999 2.498481 CAATTGGTGGGCACTCAATGAT 59.502 45.455 8.46 0.00 34.65 2.45
3860 4011 5.415701 AGCTCACTGTAATTACAATTGGTGG 59.584 40.000 24.29 18.66 35.50 4.61
3865 4016 8.671921 CAATCAGAGCTCACTGTAATTACAATT 58.328 33.333 18.55 8.87 38.79 2.32
3866 4017 7.281774 CCAATCAGAGCTCACTGTAATTACAAT 59.718 37.037 18.55 6.76 38.79 2.71
3959 4112 1.128188 ATGCCGGATCTCCCCCTAAC 61.128 60.000 5.05 0.00 0.00 2.34
4035 4188 9.512435 CTGTACTACATAAACACGCTAAATACT 57.488 33.333 0.00 0.00 0.00 2.12
4039 4192 8.514594 AGTACTGTACTACATAAACACGCTAAA 58.485 33.333 18.42 0.00 37.23 1.85
4066 4219 7.876896 AAAACGAACCAACGCATAAATAAAT 57.123 28.000 0.00 0.00 36.70 1.40
4067 4220 8.074972 ACTAAAACGAACCAACGCATAAATAAA 58.925 29.630 0.00 0.00 36.70 1.40
4068 4221 7.534578 CACTAAAACGAACCAACGCATAAATAA 59.465 33.333 0.00 0.00 36.70 1.40
4069 4222 7.016466 CACTAAAACGAACCAACGCATAAATA 58.984 34.615 0.00 0.00 36.70 1.40
4070 4223 5.854338 CACTAAAACGAACCAACGCATAAAT 59.146 36.000 0.00 0.00 36.70 1.40
4071 4224 5.206299 CACTAAAACGAACCAACGCATAAA 58.794 37.500 0.00 0.00 36.70 1.40
4072 4225 4.774586 CACTAAAACGAACCAACGCATAA 58.225 39.130 0.00 0.00 36.70 1.90
4073 4226 3.364167 GCACTAAAACGAACCAACGCATA 60.364 43.478 0.00 0.00 36.70 3.14
4074 4227 2.603652 GCACTAAAACGAACCAACGCAT 60.604 45.455 0.00 0.00 36.70 4.73
4075 4228 1.268133 GCACTAAAACGAACCAACGCA 60.268 47.619 0.00 0.00 36.70 5.24
4076 4229 1.003223 AGCACTAAAACGAACCAACGC 60.003 47.619 0.00 0.00 36.70 4.84
4077 4230 2.285756 TCAGCACTAAAACGAACCAACG 59.714 45.455 0.00 0.00 39.31 4.10
4078 4231 3.955771 TCAGCACTAAAACGAACCAAC 57.044 42.857 0.00 0.00 0.00 3.77
4079 4232 4.130857 TCATCAGCACTAAAACGAACCAA 58.869 39.130 0.00 0.00 0.00 3.67
4080 4233 3.734463 TCATCAGCACTAAAACGAACCA 58.266 40.909 0.00 0.00 0.00 3.67
4081 4234 4.742438 TTCATCAGCACTAAAACGAACC 57.258 40.909 0.00 0.00 0.00 3.62
4082 4235 7.684670 TCATATTCATCAGCACTAAAACGAAC 58.315 34.615 0.00 0.00 0.00 3.95
4083 4236 7.841915 TCATATTCATCAGCACTAAAACGAA 57.158 32.000 0.00 0.00 0.00 3.85
4084 4237 7.928167 AGATCATATTCATCAGCACTAAAACGA 59.072 33.333 0.00 0.00 0.00 3.85
4085 4238 8.008279 CAGATCATATTCATCAGCACTAAAACG 58.992 37.037 0.00 0.00 0.00 3.60
4086 4239 8.834465 ACAGATCATATTCATCAGCACTAAAAC 58.166 33.333 0.00 0.00 0.00 2.43
4087 4240 8.969260 ACAGATCATATTCATCAGCACTAAAA 57.031 30.769 0.00 0.00 0.00 1.52
4088 4241 9.702494 CTACAGATCATATTCATCAGCACTAAA 57.298 33.333 0.00 0.00 0.00 1.85
4089 4242 7.816513 GCTACAGATCATATTCATCAGCACTAA 59.183 37.037 0.00 0.00 0.00 2.24
4090 4243 7.178097 AGCTACAGATCATATTCATCAGCACTA 59.822 37.037 0.00 0.00 0.00 2.74
4091 4244 6.014413 AGCTACAGATCATATTCATCAGCACT 60.014 38.462 0.00 0.00 0.00 4.40
4092 4245 6.164876 AGCTACAGATCATATTCATCAGCAC 58.835 40.000 0.00 0.00 0.00 4.40
4093 4246 6.356186 AGCTACAGATCATATTCATCAGCA 57.644 37.500 0.00 0.00 0.00 4.41
4094 4247 6.872547 TGAAGCTACAGATCATATTCATCAGC 59.127 38.462 0.00 0.00 0.00 4.26
4095 4248 8.089597 ACTGAAGCTACAGATCATATTCATCAG 58.910 37.037 0.00 4.18 40.63 2.90
4096 4249 7.960262 ACTGAAGCTACAGATCATATTCATCA 58.040 34.615 0.00 0.00 40.63 3.07
4097 4250 8.710551 CAACTGAAGCTACAGATCATATTCATC 58.289 37.037 0.00 0.00 40.63 2.92
4098 4251 8.427276 TCAACTGAAGCTACAGATCATATTCAT 58.573 33.333 0.00 0.00 40.63 2.57
4099 4252 7.785033 TCAACTGAAGCTACAGATCATATTCA 58.215 34.615 0.00 0.00 40.63 2.57
4100 4253 8.654230 TTCAACTGAAGCTACAGATCATATTC 57.346 34.615 0.00 0.00 40.63 1.75
4102 4255 9.926158 CTATTCAACTGAAGCTACAGATCATAT 57.074 33.333 0.00 0.00 40.63 1.78
4103 4256 8.918116 ACTATTCAACTGAAGCTACAGATCATA 58.082 33.333 0.00 0.00 40.63 2.15
4104 4257 7.790027 ACTATTCAACTGAAGCTACAGATCAT 58.210 34.615 0.00 0.00 40.63 2.45
4105 4258 7.175347 ACTATTCAACTGAAGCTACAGATCA 57.825 36.000 0.00 0.00 40.63 2.92
4106 4259 6.699642 GGACTATTCAACTGAAGCTACAGATC 59.300 42.308 0.00 0.00 40.63 2.75
4107 4260 6.407525 GGGACTATTCAACTGAAGCTACAGAT 60.408 42.308 0.00 0.00 40.63 2.90
4108 4261 5.105310 GGGACTATTCAACTGAAGCTACAGA 60.105 44.000 0.00 0.00 40.63 3.41
4109 4262 5.105146 AGGGACTATTCAACTGAAGCTACAG 60.105 44.000 0.00 0.00 39.63 2.74
4110 4263 4.777896 AGGGACTATTCAACTGAAGCTACA 59.222 41.667 0.00 0.00 36.02 2.74
4111 4264 5.346181 AGGGACTATTCAACTGAAGCTAC 57.654 43.478 0.00 0.00 36.02 3.58
4112 4265 4.406003 GGAGGGACTATTCAACTGAAGCTA 59.594 45.833 0.00 0.00 41.55 3.32
4113 4266 3.198853 GGAGGGACTATTCAACTGAAGCT 59.801 47.826 0.00 0.00 41.55 3.74
4114 4267 3.536570 GGAGGGACTATTCAACTGAAGC 58.463 50.000 0.00 0.00 41.55 3.86
4115 4268 3.195825 ACGGAGGGACTATTCAACTGAAG 59.804 47.826 0.00 0.00 41.55 3.02
4116 4269 3.170717 ACGGAGGGACTATTCAACTGAA 58.829 45.455 0.00 0.00 41.55 3.02
4117 4270 2.816411 ACGGAGGGACTATTCAACTGA 58.184 47.619 0.00 0.00 41.55 3.41
4118 4271 3.056107 TGAACGGAGGGACTATTCAACTG 60.056 47.826 0.00 0.00 41.55 3.16
4119 4272 3.056035 GTGAACGGAGGGACTATTCAACT 60.056 47.826 0.00 0.00 41.55 3.16
4120 4273 3.259902 GTGAACGGAGGGACTATTCAAC 58.740 50.000 0.00 0.00 41.55 3.18
4121 4274 2.901192 TGTGAACGGAGGGACTATTCAA 59.099 45.455 0.00 0.00 41.55 2.69
4122 4275 2.531771 TGTGAACGGAGGGACTATTCA 58.468 47.619 0.00 0.00 41.55 2.57
4123 4276 3.604875 TTGTGAACGGAGGGACTATTC 57.395 47.619 0.00 0.00 41.55 1.75
4124 4277 4.569719 ATTTGTGAACGGAGGGACTATT 57.430 40.909 0.00 0.00 41.55 1.73
4125 4278 5.888982 ATATTTGTGAACGGAGGGACTAT 57.111 39.130 0.00 0.00 41.55 2.12
4126 4279 6.608405 TCTTATATTTGTGAACGGAGGGACTA 59.392 38.462 0.00 0.00 41.55 2.59
4128 4281 5.667466 TCTTATATTTGTGAACGGAGGGAC 58.333 41.667 0.00 0.00 0.00 4.46
4129 4282 5.943349 TCTTATATTTGTGAACGGAGGGA 57.057 39.130 0.00 0.00 0.00 4.20
4130 4283 6.055588 ACATCTTATATTTGTGAACGGAGGG 58.944 40.000 0.00 0.00 0.00 4.30
4131 4284 7.553881 AACATCTTATATTTGTGAACGGAGG 57.446 36.000 0.00 0.00 0.00 4.30
4181 4334 9.520515 AGTGTATTTGTTCATTTATTCCAGTCT 57.479 29.630 0.00 0.00 0.00 3.24
4190 4343 9.666626 CCACGTTTTAGTGTATTTGTTCATTTA 57.333 29.630 0.00 0.00 40.33 1.40
4191 4344 7.168469 GCCACGTTTTAGTGTATTTGTTCATTT 59.832 33.333 0.00 0.00 40.33 2.32
4192 4345 6.639279 GCCACGTTTTAGTGTATTTGTTCATT 59.361 34.615 0.00 0.00 40.33 2.57
4193 4346 6.016610 AGCCACGTTTTAGTGTATTTGTTCAT 60.017 34.615 0.00 0.00 40.33 2.57
4194 4347 5.297278 AGCCACGTTTTAGTGTATTTGTTCA 59.703 36.000 0.00 0.00 40.33 3.18
4195 4348 5.754778 AGCCACGTTTTAGTGTATTTGTTC 58.245 37.500 0.00 0.00 40.33 3.18
4196 4349 5.761165 AGCCACGTTTTAGTGTATTTGTT 57.239 34.783 0.00 0.00 40.33 2.83
4197 4350 7.443259 AATAGCCACGTTTTAGTGTATTTGT 57.557 32.000 0.00 0.00 40.33 2.83
4198 4351 8.444715 TGTAATAGCCACGTTTTAGTGTATTTG 58.555 33.333 0.00 0.00 40.33 2.32
4199 4352 8.550710 TGTAATAGCCACGTTTTAGTGTATTT 57.449 30.769 0.00 0.00 40.33 1.40
4200 4353 8.726870 ATGTAATAGCCACGTTTTAGTGTATT 57.273 30.769 0.00 0.00 40.33 1.89
4201 4354 7.440255 GGATGTAATAGCCACGTTTTAGTGTAT 59.560 37.037 0.00 0.00 40.33 2.29
4202 4355 6.757947 GGATGTAATAGCCACGTTTTAGTGTA 59.242 38.462 0.00 0.00 40.33 2.90
4203 4356 5.583457 GGATGTAATAGCCACGTTTTAGTGT 59.417 40.000 0.00 0.00 40.33 3.55
4204 4357 5.583061 TGGATGTAATAGCCACGTTTTAGTG 59.417 40.000 0.00 0.00 40.67 2.74
4205 4358 5.736813 TGGATGTAATAGCCACGTTTTAGT 58.263 37.500 0.00 0.00 40.67 2.24
4206 4359 6.671614 TTGGATGTAATAGCCACGTTTTAG 57.328 37.500 0.00 0.00 46.41 1.85
4207 4360 7.337184 TGAATTGGATGTAATAGCCACGTTTTA 59.663 33.333 0.00 0.00 46.41 1.52
4208 4361 6.151985 TGAATTGGATGTAATAGCCACGTTTT 59.848 34.615 0.00 0.00 46.41 2.43
4209 4362 5.650266 TGAATTGGATGTAATAGCCACGTTT 59.350 36.000 0.00 0.00 46.41 3.60
4210 4363 5.189928 TGAATTGGATGTAATAGCCACGTT 58.810 37.500 0.00 0.00 46.41 3.99
4211 4364 4.776349 TGAATTGGATGTAATAGCCACGT 58.224 39.130 0.00 0.00 46.41 4.49
4212 4365 5.056480 TCTGAATTGGATGTAATAGCCACG 58.944 41.667 0.00 0.00 46.41 4.94
4213 4366 6.942532 TTCTGAATTGGATGTAATAGCCAC 57.057 37.500 0.00 0.00 46.41 5.01
4214 4367 7.953005 TTTTCTGAATTGGATGTAATAGCCA 57.047 32.000 0.00 0.00 44.74 4.75
4242 4395 8.554528 CGTTCACAAATATAAGATGCTCTGATT 58.445 33.333 0.00 0.00 0.00 2.57
4243 4396 7.172190 CCGTTCACAAATATAAGATGCTCTGAT 59.828 37.037 0.00 0.00 0.00 2.90
4244 4397 6.479990 CCGTTCACAAATATAAGATGCTCTGA 59.520 38.462 0.00 0.00 0.00 3.27
4245 4398 6.479990 TCCGTTCACAAATATAAGATGCTCTG 59.520 38.462 0.00 0.00 0.00 3.35
4246 4399 6.582636 TCCGTTCACAAATATAAGATGCTCT 58.417 36.000 0.00 0.00 0.00 4.09
4247 4400 6.073548 CCTCCGTTCACAAATATAAGATGCTC 60.074 42.308 0.00 0.00 0.00 4.26
4248 4401 5.760253 CCTCCGTTCACAAATATAAGATGCT 59.240 40.000 0.00 0.00 0.00 3.79
4249 4402 5.049405 CCCTCCGTTCACAAATATAAGATGC 60.049 44.000 0.00 0.00 0.00 3.91
4250 4403 5.470098 CCCCTCCGTTCACAAATATAAGATG 59.530 44.000 0.00 0.00 0.00 2.90
4251 4404 5.456186 CCCCCTCCGTTCACAAATATAAGAT 60.456 44.000 0.00 0.00 0.00 2.40
4252 4405 4.141574 CCCCCTCCGTTCACAAATATAAGA 60.142 45.833 0.00 0.00 0.00 2.10
4253 4406 4.134563 CCCCCTCCGTTCACAAATATAAG 58.865 47.826 0.00 0.00 0.00 1.73
4254 4407 3.524380 ACCCCCTCCGTTCACAAATATAA 59.476 43.478 0.00 0.00 0.00 0.98
4255 4408 3.116959 ACCCCCTCCGTTCACAAATATA 58.883 45.455 0.00 0.00 0.00 0.86
4256 4409 1.920351 ACCCCCTCCGTTCACAAATAT 59.080 47.619 0.00 0.00 0.00 1.28
4257 4410 1.364269 ACCCCCTCCGTTCACAAATA 58.636 50.000 0.00 0.00 0.00 1.40
4258 4411 1.003928 GTACCCCCTCCGTTCACAAAT 59.996 52.381 0.00 0.00 0.00 2.32
4259 4412 0.397564 GTACCCCCTCCGTTCACAAA 59.602 55.000 0.00 0.00 0.00 2.83
4260 4413 0.763604 TGTACCCCCTCCGTTCACAA 60.764 55.000 0.00 0.00 0.00 3.33
4261 4414 0.545787 ATGTACCCCCTCCGTTCACA 60.546 55.000 0.00 0.00 0.00 3.58
4262 4415 0.177373 GATGTACCCCCTCCGTTCAC 59.823 60.000 0.00 0.00 0.00 3.18
4263 4416 0.252330 TGATGTACCCCCTCCGTTCA 60.252 55.000 0.00 0.00 0.00 3.18
4264 4417 0.177373 GTGATGTACCCCCTCCGTTC 59.823 60.000 0.00 0.00 0.00 3.95
4265 4418 1.269703 GGTGATGTACCCCCTCCGTT 61.270 60.000 0.00 0.00 44.15 4.44
4266 4419 1.688187 GGTGATGTACCCCCTCCGT 60.688 63.158 0.00 0.00 44.15 4.69
4267 4420 3.227250 GGTGATGTACCCCCTCCG 58.773 66.667 0.00 0.00 44.15 4.63
4275 4428 4.764172 AGAGAGCTGAAATGGTGATGTAC 58.236 43.478 0.00 0.00 0.00 2.90
4276 4429 5.426689 AAGAGAGCTGAAATGGTGATGTA 57.573 39.130 0.00 0.00 0.00 2.29
4277 4430 3.996921 AGAGAGCTGAAATGGTGATGT 57.003 42.857 0.00 0.00 0.00 3.06
4278 4431 5.640189 AAAAGAGAGCTGAAATGGTGATG 57.360 39.130 0.00 0.00 0.00 3.07
4279 4432 5.184671 GGAAAAAGAGAGCTGAAATGGTGAT 59.815 40.000 0.00 0.00 0.00 3.06
4280 4433 4.520492 GGAAAAAGAGAGCTGAAATGGTGA 59.480 41.667 0.00 0.00 0.00 4.02
4281 4434 4.522022 AGGAAAAAGAGAGCTGAAATGGTG 59.478 41.667 0.00 0.00 0.00 4.17
4282 4435 4.734266 AGGAAAAAGAGAGCTGAAATGGT 58.266 39.130 0.00 0.00 0.00 3.55
4283 4436 5.008980 AGAGGAAAAAGAGAGCTGAAATGG 58.991 41.667 0.00 0.00 0.00 3.16
4284 4437 6.093357 GGTAGAGGAAAAAGAGAGCTGAAATG 59.907 42.308 0.00 0.00 0.00 2.32
4285 4438 6.176896 GGTAGAGGAAAAAGAGAGCTGAAAT 58.823 40.000 0.00 0.00 0.00 2.17
4286 4439 5.552178 GGTAGAGGAAAAAGAGAGCTGAAA 58.448 41.667 0.00 0.00 0.00 2.69
4287 4440 4.322049 CGGTAGAGGAAAAAGAGAGCTGAA 60.322 45.833 0.00 0.00 0.00 3.02
4288 4441 3.193691 CGGTAGAGGAAAAAGAGAGCTGA 59.806 47.826 0.00 0.00 0.00 4.26
4289 4442 3.516615 CGGTAGAGGAAAAAGAGAGCTG 58.483 50.000 0.00 0.00 0.00 4.24
4290 4443 2.093921 GCGGTAGAGGAAAAAGAGAGCT 60.094 50.000 0.00 0.00 0.00 4.09
4291 4444 2.272678 GCGGTAGAGGAAAAAGAGAGC 58.727 52.381 0.00 0.00 0.00 4.09
4292 4445 2.233922 TGGCGGTAGAGGAAAAAGAGAG 59.766 50.000 0.00 0.00 0.00 3.20
4293 4446 2.233922 CTGGCGGTAGAGGAAAAAGAGA 59.766 50.000 0.00 0.00 0.00 3.10
4294 4447 2.028020 ACTGGCGGTAGAGGAAAAAGAG 60.028 50.000 0.00 0.00 0.00 2.85
4295 4448 1.975680 ACTGGCGGTAGAGGAAAAAGA 59.024 47.619 0.00 0.00 0.00 2.52
4296 4449 2.474410 ACTGGCGGTAGAGGAAAAAG 57.526 50.000 0.00 0.00 0.00 2.27
4297 4450 2.943036 AACTGGCGGTAGAGGAAAAA 57.057 45.000 0.00 0.00 0.00 1.94
4298 4451 2.943036 AAACTGGCGGTAGAGGAAAA 57.057 45.000 0.00 0.00 0.00 2.29
4299 4452 4.354893 TTTAAACTGGCGGTAGAGGAAA 57.645 40.909 0.00 0.00 0.00 3.13
4300 4453 4.354893 TTTTAAACTGGCGGTAGAGGAA 57.645 40.909 0.00 0.00 0.00 3.36
4301 4454 4.563140 ATTTTAAACTGGCGGTAGAGGA 57.437 40.909 0.00 0.00 0.00 3.71
4302 4455 6.937436 AATATTTTAAACTGGCGGTAGAGG 57.063 37.500 0.00 0.00 0.00 3.69
4303 4456 7.010738 TCGAAATATTTTAAACTGGCGGTAGAG 59.989 37.037 0.00 0.00 0.00 2.43
4304 4457 6.817641 TCGAAATATTTTAAACTGGCGGTAGA 59.182 34.615 0.00 0.00 0.00 2.59
4305 4458 7.007313 TCGAAATATTTTAAACTGGCGGTAG 57.993 36.000 0.00 0.00 0.00 3.18
4306 4459 6.594937 ACTCGAAATATTTTAAACTGGCGGTA 59.405 34.615 0.00 0.00 0.00 4.02
4307 4460 5.413523 ACTCGAAATATTTTAAACTGGCGGT 59.586 36.000 1.43 0.00 0.00 5.68
4308 4461 5.737290 CACTCGAAATATTTTAAACTGGCGG 59.263 40.000 1.43 0.00 0.00 6.13
4309 4462 5.227184 GCACTCGAAATATTTTAAACTGGCG 59.773 40.000 1.43 0.00 0.00 5.69
4310 4463 5.227184 CGCACTCGAAATATTTTAAACTGGC 59.773 40.000 1.43 1.08 38.10 4.85
4311 4464 5.737290 CCGCACTCGAAATATTTTAAACTGG 59.263 40.000 1.43 0.00 38.10 4.00
4312 4465 5.227184 GCCGCACTCGAAATATTTTAAACTG 59.773 40.000 1.43 0.00 38.10 3.16
4313 4466 5.123344 AGCCGCACTCGAAATATTTTAAACT 59.877 36.000 1.43 0.00 38.10 2.66
4314 4467 5.329493 AGCCGCACTCGAAATATTTTAAAC 58.671 37.500 1.43 0.00 38.10 2.01
4315 4468 5.554822 AGCCGCACTCGAAATATTTTAAA 57.445 34.783 1.43 0.00 38.10 1.52
4316 4469 6.665474 TTAGCCGCACTCGAAATATTTTAA 57.335 33.333 1.43 0.00 38.10 1.52
4317 4470 6.704493 AGATTAGCCGCACTCGAAATATTTTA 59.296 34.615 1.43 0.00 38.10 1.52
4318 4471 5.527582 AGATTAGCCGCACTCGAAATATTTT 59.472 36.000 1.43 0.00 38.10 1.82
4319 4472 5.050091 CAGATTAGCCGCACTCGAAATATTT 60.050 40.000 0.00 0.00 38.10 1.40
4320 4473 4.449068 CAGATTAGCCGCACTCGAAATATT 59.551 41.667 0.00 0.00 38.10 1.28
4321 4474 3.990469 CAGATTAGCCGCACTCGAAATAT 59.010 43.478 0.00 0.00 38.10 1.28
4322 4475 3.381045 CAGATTAGCCGCACTCGAAATA 58.619 45.455 0.00 0.00 38.10 1.40
4323 4476 2.205074 CAGATTAGCCGCACTCGAAAT 58.795 47.619 0.00 0.00 38.10 2.17
4324 4477 1.640428 CAGATTAGCCGCACTCGAAA 58.360 50.000 0.00 0.00 38.10 3.46
4325 4478 0.806102 GCAGATTAGCCGCACTCGAA 60.806 55.000 0.00 0.00 38.10 3.71
4326 4479 1.226974 GCAGATTAGCCGCACTCGA 60.227 57.895 0.00 0.00 38.10 4.04
4327 4480 1.519234 TGCAGATTAGCCGCACTCG 60.519 57.895 0.00 0.00 0.00 4.18
4328 4481 4.521075 TGCAGATTAGCCGCACTC 57.479 55.556 0.00 0.00 0.00 3.51
4331 4484 2.124736 GGGTGCAGATTAGCCGCA 60.125 61.111 0.00 0.00 0.00 5.69
4334 4487 2.203209 CCCGGGTGCAGATTAGCC 60.203 66.667 14.18 0.00 0.00 3.93
4335 4488 2.902343 GCCCGGGTGCAGATTAGC 60.902 66.667 24.63 0.00 0.00 3.09
4336 4489 1.227674 GAGCCCGGGTGCAGATTAG 60.228 63.158 24.63 0.00 0.00 1.73
4337 4490 1.971505 CTGAGCCCGGGTGCAGATTA 61.972 60.000 29.78 7.33 0.00 1.75
4338 4491 3.329889 TGAGCCCGGGTGCAGATT 61.330 61.111 24.63 0.00 0.00 2.40
4339 4492 3.790437 CTGAGCCCGGGTGCAGAT 61.790 66.667 29.78 9.09 0.00 2.90
4352 4505 2.786539 TAAGCGTGGGTGCAGCTGAG 62.787 60.000 20.43 8.15 41.53 3.35
4353 4506 2.786539 CTAAGCGTGGGTGCAGCTGA 62.787 60.000 20.43 0.00 41.53 4.26
4354 4507 2.358615 TAAGCGTGGGTGCAGCTG 60.359 61.111 16.65 10.11 41.53 4.24
4355 4508 2.046892 CTAAGCGTGGGTGCAGCT 60.047 61.111 16.65 3.35 43.90 4.24
4356 4509 1.234615 TTTCTAAGCGTGGGTGCAGC 61.235 55.000 7.55 7.55 37.31 5.25
4357 4510 1.234821 TTTTCTAAGCGTGGGTGCAG 58.765 50.000 0.00 0.00 37.31 4.41
4358 4511 1.681538 TTTTTCTAAGCGTGGGTGCA 58.318 45.000 0.00 0.00 37.31 4.57
4418 4571 8.293867 CGTCAAATTATCTACCACCAAGAAAAA 58.706 33.333 0.00 0.00 0.00 1.94
4419 4572 7.574217 GCGTCAAATTATCTACCACCAAGAAAA 60.574 37.037 0.00 0.00 0.00 2.29
4420 4573 6.128117 GCGTCAAATTATCTACCACCAAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
4421 4574 5.353123 GCGTCAAATTATCTACCACCAAGAA 59.647 40.000 0.00 0.00 0.00 2.52
4422 4575 4.873827 GCGTCAAATTATCTACCACCAAGA 59.126 41.667 0.00 0.00 0.00 3.02
4423 4576 4.260212 CGCGTCAAATTATCTACCACCAAG 60.260 45.833 0.00 0.00 0.00 3.61
4424 4577 3.619483 CGCGTCAAATTATCTACCACCAA 59.381 43.478 0.00 0.00 0.00 3.67
4425 4578 3.191669 CGCGTCAAATTATCTACCACCA 58.808 45.455 0.00 0.00 0.00 4.17
4426 4579 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
4427 4580 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
4428 4581 4.109766 CTCACGCGTCAAATTATCTACCA 58.890 43.478 9.86 0.00 0.00 3.25
4429 4582 3.489785 CCTCACGCGTCAAATTATCTACC 59.510 47.826 9.86 0.00 0.00 3.18
4430 4583 4.026804 CACCTCACGCGTCAAATTATCTAC 60.027 45.833 9.86 0.00 0.00 2.59
4431 4584 4.109766 CACCTCACGCGTCAAATTATCTA 58.890 43.478 9.86 0.00 0.00 1.98
4432 4585 2.930040 CACCTCACGCGTCAAATTATCT 59.070 45.455 9.86 0.00 0.00 1.98
4433 4586 2.536928 GCACCTCACGCGTCAAATTATC 60.537 50.000 9.86 0.00 0.00 1.75
4434 4587 1.396996 GCACCTCACGCGTCAAATTAT 59.603 47.619 9.86 0.00 0.00 1.28
4435 4588 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
4436 4589 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
4437 4590 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
4448 4601 1.215382 GAATTTTGGGGCGCACCTC 59.785 57.895 32.18 15.41 40.03 3.85
4449 4602 1.118356 TTGAATTTTGGGGCGCACCT 61.118 50.000 32.18 9.19 40.03 4.00
4450 4603 0.948623 GTTGAATTTTGGGGCGCACC 60.949 55.000 25.59 25.59 39.11 5.01
4451 4604 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.000 10.83 4.83 0.00 5.34
4452 4605 0.316841 GAGTTGAATTTTGGGGCGCA 59.683 50.000 10.83 0.00 0.00 6.09
4453 4606 0.316841 TGAGTTGAATTTTGGGGCGC 59.683 50.000 0.00 0.00 0.00 6.53
4454 4607 3.317603 AATGAGTTGAATTTTGGGGCG 57.682 42.857 0.00 0.00 0.00 6.13
4455 4608 4.640364 TCAAATGAGTTGAATTTTGGGGC 58.360 39.130 0.00 0.00 43.43 5.80
4456 4609 4.692155 GCTCAAATGAGTTGAATTTTGGGG 59.308 41.667 11.77 0.00 45.67 4.96
4457 4610 5.299148 TGCTCAAATGAGTTGAATTTTGGG 58.701 37.500 11.77 0.00 45.67 4.12
4458 4611 6.872020 AGATGCTCAAATGAGTTGAATTTTGG 59.128 34.615 11.77 0.00 45.67 3.28
4459 4612 7.597369 TCAGATGCTCAAATGAGTTGAATTTTG 59.403 33.333 11.77 0.00 45.67 2.44
4460 4613 7.663827 TCAGATGCTCAAATGAGTTGAATTTT 58.336 30.769 11.77 0.00 45.67 1.82
4461 4614 7.223260 TCAGATGCTCAAATGAGTTGAATTT 57.777 32.000 11.77 0.00 45.67 1.82
4462 4615 6.625300 GCTCAGATGCTCAAATGAGTTGAATT 60.625 38.462 11.77 0.00 45.67 2.17
4463 4616 5.163642 GCTCAGATGCTCAAATGAGTTGAAT 60.164 40.000 11.77 2.01 45.67 2.57
4464 4617 4.155462 GCTCAGATGCTCAAATGAGTTGAA 59.845 41.667 11.77 0.00 45.67 2.69
4465 4618 3.688185 GCTCAGATGCTCAAATGAGTTGA 59.312 43.478 11.77 0.00 44.20 3.18
4466 4619 3.439129 TGCTCAGATGCTCAAATGAGTTG 59.561 43.478 11.77 6.26 43.85 3.16
4467 4620 3.682696 TGCTCAGATGCTCAAATGAGTT 58.317 40.909 11.77 0.66 43.85 3.01
4468 4621 3.271729 CTGCTCAGATGCTCAAATGAGT 58.728 45.455 11.77 0.00 43.85 3.41
4469 4622 2.032302 GCTGCTCAGATGCTCAAATGAG 59.968 50.000 6.05 6.05 44.75 2.90
4470 4623 2.014857 GCTGCTCAGATGCTCAAATGA 58.985 47.619 0.29 0.00 0.00 2.57
4471 4624 2.017782 AGCTGCTCAGATGCTCAAATG 58.982 47.619 0.00 0.00 30.41 2.32
4472 4625 2.421751 AGCTGCTCAGATGCTCAAAT 57.578 45.000 0.00 0.00 30.41 2.32
4473 4626 3.950869 AGCTGCTCAGATGCTCAAA 57.049 47.368 0.00 0.00 30.41 2.69
4477 4630 1.438399 CGAGAGCTGCTCAGATGCT 59.562 57.895 29.49 9.44 44.15 3.79
4478 4631 1.592131 CCGAGAGCTGCTCAGATGC 60.592 63.158 29.49 12.92 44.15 3.91
4479 4632 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
4480 4633 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
4481 4634 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
4482 4635 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
4483 4636 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
4484 4637 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
4485 4638 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.