Multiple sequence alignment - TraesCS2B01G596300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G596300 chr2B 100.000 6545 0 0 1 6545 779838364 779831820 0.000000e+00 12087.0
1 TraesCS2B01G596300 chr2B 87.405 1183 81 23 5339 6476 779669933 779668774 0.000000e+00 1297.0
2 TraesCS2B01G596300 chr2B 86.898 1183 88 23 5339 6476 779394121 779392961 0.000000e+00 1264.0
3 TraesCS2B01G596300 chr2D 92.431 4254 189 47 2317 6476 650835489 650831275 0.000000e+00 5949.0
4 TraesCS2B01G596300 chr2D 91.407 1059 62 11 461 1516 650837257 650836225 0.000000e+00 1424.0
5 TraesCS2B01G596300 chr2D 89.867 1056 77 19 4419 5456 635534110 635533067 0.000000e+00 1330.0
6 TraesCS2B01G596300 chr2D 89.867 1056 77 19 4419 5456 635549872 635548829 0.000000e+00 1330.0
7 TraesCS2B01G596300 chr2D 89.848 1054 77 19 4421 5456 635492873 635491832 0.000000e+00 1327.0
8 TraesCS2B01G596300 chr2D 89.773 1056 78 19 4419 5456 635525442 635524399 0.000000e+00 1325.0
9 TraesCS2B01G596300 chr2D 87.574 1183 84 23 5339 6476 635282004 635280840 0.000000e+00 1312.0
10 TraesCS2B01G596300 chr2D 87.574 1183 82 23 5339 6476 635441472 635440310 0.000000e+00 1310.0
11 TraesCS2B01G596300 chr2D 86.942 1187 90 28 5339 6479 635288455 635287288 0.000000e+00 1273.0
12 TraesCS2B01G596300 chr2D 94.708 718 36 2 1570 2286 650836202 650835486 0.000000e+00 1114.0
13 TraesCS2B01G596300 chr2D 88.513 827 44 14 5699 6476 635532492 635531668 0.000000e+00 953.0
14 TraesCS2B01G596300 chr2D 88.029 827 48 14 5699 6476 635507893 635507069 0.000000e+00 931.0
15 TraesCS2B01G596300 chr2D 87.937 829 47 15 5699 6476 635499917 635499091 0.000000e+00 928.0
16 TraesCS2B01G596300 chr2D 87.923 828 47 21 5699 6476 635482573 635481749 0.000000e+00 926.0
17 TraesCS2B01G596300 chr2D 87.681 828 50 15 5699 6476 635491254 635490429 0.000000e+00 917.0
18 TraesCS2B01G596300 chr2D 87.666 827 51 16 5699 6476 635515843 635515019 0.000000e+00 915.0
19 TraesCS2B01G596300 chr2D 87.681 828 47 18 5699 6476 635548252 635547430 0.000000e+00 913.0
20 TraesCS2B01G596300 chr2D 87.424 827 53 16 5699 6476 635523824 635523000 0.000000e+00 904.0
21 TraesCS2B01G596300 chr2D 87.077 828 54 17 5699 6476 635473910 635473086 0.000000e+00 887.0
22 TraesCS2B01G596300 chr2D 84.203 728 54 27 5792 6476 635461242 635460533 0.000000e+00 651.0
23 TraesCS2B01G596300 chr2A 93.746 2878 139 21 845 3696 777356856 777359718 0.000000e+00 4279.0
24 TraesCS2B01G596300 chr2A 89.202 2130 145 34 4417 6476 777442544 777444658 0.000000e+00 2580.0
25 TraesCS2B01G596300 chr2A 89.785 1625 99 20 4904 6476 777360927 777362536 0.000000e+00 2019.0
26 TraesCS2B01G596300 chr2A 89.942 1561 117 23 4417 5949 777450885 777452433 0.000000e+00 1977.0
27 TraesCS2B01G596300 chr2A 93.188 1189 57 12 3697 4870 777359747 777360926 0.000000e+00 1725.0
28 TraesCS2B01G596300 chr2A 98.462 65 1 0 6481 6545 459017291 459017227 1.490000e-21 115.0
29 TraesCS2B01G596300 chrUn 90.133 1054 76 18 4421 5456 31846662 31847705 0.000000e+00 1345.0
30 TraesCS2B01G596300 chrUn 90.038 1054 77 18 4421 5456 31840810 31841853 0.000000e+00 1339.0
31 TraesCS2B01G596300 chrUn 88.257 826 45 15 5701 6476 31848284 31849107 0.000000e+00 941.0
32 TraesCS2B01G596300 chrUn 88.043 828 47 15 5699 6476 31842430 31843255 0.000000e+00 933.0
33 TraesCS2B01G596300 chrUn 87.937 829 47 16 5699 6476 386188055 386187229 0.000000e+00 928.0
34 TraesCS2B01G596300 chrUn 91.081 583 34 9 5701 6265 382791586 382792168 0.000000e+00 773.0
35 TraesCS2B01G596300 chrUn 88.821 653 28 10 5867 6476 31833923 31834573 0.000000e+00 760.0
36 TraesCS2B01G596300 chrUn 97.059 68 2 0 6478 6545 322902135 322902202 1.490000e-21 115.0
37 TraesCS2B01G596300 chr7D 88.796 357 18 8 74 418 232324302 232324648 1.020000e-112 418.0
38 TraesCS2B01G596300 chr7D 97.015 67 2 0 6479 6545 81644103 81644169 5.360000e-21 113.0
39 TraesCS2B01G596300 chr1B 86.902 397 22 11 35 418 654294334 654294713 1.020000e-112 418.0
40 TraesCS2B01G596300 chr5B 86.592 358 25 12 73 418 387759826 387760172 2.230000e-99 374.0
41 TraesCS2B01G596300 chr5B 100.000 36 0 0 417 452 555192629 555192594 4.240000e-07 67.6
42 TraesCS2B01G596300 chr5B 100.000 36 0 0 417 452 564973537 564973502 4.240000e-07 67.6
43 TraesCS2B01G596300 chr7B 98.462 65 1 0 6481 6545 729233008 729232944 1.490000e-21 115.0
44 TraesCS2B01G596300 chr7B 97.436 39 1 0 414 452 673660773 673660811 4.240000e-07 67.6
45 TraesCS2B01G596300 chr6D 97.059 68 2 0 6478 6545 5755835 5755902 1.490000e-21 115.0
46 TraesCS2B01G596300 chr5A 95.833 72 2 1 6474 6545 535481692 535481762 1.490000e-21 115.0
47 TraesCS2B01G596300 chr3D 97.059 68 2 0 6478 6545 582266388 582266455 1.490000e-21 115.0
48 TraesCS2B01G596300 chr1D 95.714 70 3 0 6476 6545 480672585 480672516 5.360000e-21 113.0
49 TraesCS2B01G596300 chr1A 94.444 72 3 1 6474 6545 204802760 204802690 6.940000e-20 110.0
50 TraesCS2B01G596300 chr6B 97.297 37 1 0 417 453 578302699 578302663 5.480000e-06 63.9
51 TraesCS2B01G596300 chr6B 93.182 44 0 2 417 460 80977767 80977727 1.970000e-05 62.1
52 TraesCS2B01G596300 chr7A 97.222 36 1 0 417 452 43458508 43458473 1.970000e-05 62.1
53 TraesCS2B01G596300 chr7A 97.222 36 1 0 417 452 64622099 64622064 1.970000e-05 62.1
54 TraesCS2B01G596300 chr4D 94.872 39 2 0 414 452 327376333 327376371 1.970000e-05 62.1
55 TraesCS2B01G596300 chr4A 97.222 36 1 0 417 452 740854981 740854946 1.970000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G596300 chr2B 779831820 779838364 6544 True 12087.000000 12087 100.000000 1 6545 1 chr2B.!!$R3 6544
1 TraesCS2B01G596300 chr2B 779668774 779669933 1159 True 1297.000000 1297 87.405000 5339 6476 1 chr2B.!!$R2 1137
2 TraesCS2B01G596300 chr2B 779392961 779394121 1160 True 1264.000000 1264 86.898000 5339 6476 1 chr2B.!!$R1 1137
3 TraesCS2B01G596300 chr2D 650831275 650837257 5982 True 2829.000000 5949 92.848667 461 6476 3 chr2D.!!$R14 6015
4 TraesCS2B01G596300 chr2D 635280840 635282004 1164 True 1312.000000 1312 87.574000 5339 6476 1 chr2D.!!$R1 1137
5 TraesCS2B01G596300 chr2D 635440310 635441472 1162 True 1310.000000 1310 87.574000 5339 6476 1 chr2D.!!$R3 1137
6 TraesCS2B01G596300 chr2D 635287288 635288455 1167 True 1273.000000 1273 86.942000 5339 6479 1 chr2D.!!$R2 1140
7 TraesCS2B01G596300 chr2D 635531668 635534110 2442 True 1141.500000 1330 89.190000 4419 6476 2 chr2D.!!$R12 2057
8 TraesCS2B01G596300 chr2D 635490429 635492873 2444 True 1122.000000 1327 88.764500 4421 6476 2 chr2D.!!$R10 2055
9 TraesCS2B01G596300 chr2D 635547430 635549872 2442 True 1121.500000 1330 88.774000 4419 6476 2 chr2D.!!$R13 2057
10 TraesCS2B01G596300 chr2D 635523000 635525442 2442 True 1114.500000 1325 88.598500 4419 6476 2 chr2D.!!$R11 2057
11 TraesCS2B01G596300 chr2D 635507069 635507893 824 True 931.000000 931 88.029000 5699 6476 1 chr2D.!!$R8 777
12 TraesCS2B01G596300 chr2D 635499091 635499917 826 True 928.000000 928 87.937000 5699 6476 1 chr2D.!!$R7 777
13 TraesCS2B01G596300 chr2D 635481749 635482573 824 True 926.000000 926 87.923000 5699 6476 1 chr2D.!!$R6 777
14 TraesCS2B01G596300 chr2D 635515019 635515843 824 True 915.000000 915 87.666000 5699 6476 1 chr2D.!!$R9 777
15 TraesCS2B01G596300 chr2D 635473086 635473910 824 True 887.000000 887 87.077000 5699 6476 1 chr2D.!!$R5 777
16 TraesCS2B01G596300 chr2D 635460533 635461242 709 True 651.000000 651 84.203000 5792 6476 1 chr2D.!!$R4 684
17 TraesCS2B01G596300 chr2A 777356856 777362536 5680 False 2674.333333 4279 92.239667 845 6476 3 chr2A.!!$F3 5631
18 TraesCS2B01G596300 chr2A 777442544 777444658 2114 False 2580.000000 2580 89.202000 4417 6476 1 chr2A.!!$F1 2059
19 TraesCS2B01G596300 chr2A 777450885 777452433 1548 False 1977.000000 1977 89.942000 4417 5949 1 chr2A.!!$F2 1532
20 TraesCS2B01G596300 chrUn 31840810 31849107 8297 False 1139.500000 1345 89.117750 4421 6476 4 chrUn.!!$F4 2055
21 TraesCS2B01G596300 chrUn 386187229 386188055 826 True 928.000000 928 87.937000 5699 6476 1 chrUn.!!$R1 777
22 TraesCS2B01G596300 chrUn 382791586 382792168 582 False 773.000000 773 91.081000 5701 6265 1 chrUn.!!$F3 564
23 TraesCS2B01G596300 chrUn 31833923 31834573 650 False 760.000000 760 88.821000 5867 6476 1 chrUn.!!$F1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 163 0.030101 GTCTCCTCTTCCGCTCGATG 59.970 60.0 0.00 0.0 0.00 3.84 F
308 309 0.103937 CCCATCTCGTCTGCTCCTTC 59.896 60.0 0.00 0.0 0.00 3.46 F
309 310 0.103937 CCATCTCGTCTGCTCCTTCC 59.896 60.0 0.00 0.0 0.00 3.46 F
453 454 0.167470 CAGACATCCAAACGCAGCAG 59.833 55.0 0.00 0.0 0.00 4.24 F
567 568 0.460284 CGCTTGTATCGGCTGGTCTT 60.460 55.0 0.00 0.0 0.00 3.01 F
1343 1366 0.690762 GGTTGCTCCAACTCAGGGTA 59.309 55.0 7.88 0.0 43.14 3.69 F
3174 3198 0.179045 ATCCGCAGAGGTATTGGTGC 60.179 55.0 0.00 0.0 41.99 5.01 F
3742 3803 0.447801 GCTGCTCGGTATGTTGGTTG 59.552 55.0 0.00 0.0 0.00 3.77 F
4546 4630 0.627451 TTTGGATGATCCTGGCAGCT 59.373 50.0 13.44 0.0 37.46 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1068 1091 1.269309 GCGGAATCGTAGAGCATGTCT 60.269 52.381 0.00 0.0 43.63 3.41 R
1528 1551 1.597742 ATAACAGATGGCATCGCACC 58.402 50.000 21.01 0.0 0.00 5.01 R
1643 1666 3.065371 GTCATCAAAATAACGGAGCCAGG 59.935 47.826 0.00 0.0 0.00 4.45 R
2333 2357 1.518325 TGTGCAAACAGTATGACCCG 58.482 50.000 0.00 0.0 39.69 5.28 R
2555 2579 5.749109 GTCATTACTCACTAGTTTATGCGCT 59.251 40.000 9.73 0.0 37.15 5.92 R
3240 3264 0.544697 ACCCCGCGTTCCTATTCAAT 59.455 50.000 4.92 0.0 0.00 2.57 R
4411 4479 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.0 0.00 3.82 R
5345 5440 1.045911 GCAGGGTTTGGTGGGTGAAA 61.046 55.000 0.00 0.0 0.00 2.69 R
6524 12879 0.179234 TGCGAACACCAGGACTTGAA 59.821 50.000 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.665603 ACAAGAAGAGGAGGCGGC 59.334 61.111 0.00 0.00 0.00 6.53
18 19 1.915769 ACAAGAAGAGGAGGCGGCT 60.916 57.895 13.09 13.09 0.00 5.52
19 20 1.153469 CAAGAAGAGGAGGCGGCTC 60.153 63.158 29.56 29.56 0.00 4.70
20 21 2.363172 AAGAAGAGGAGGCGGCTCC 61.363 63.158 42.54 42.54 43.65 4.70
21 22 3.077556 GAAGAGGAGGCGGCTCCA 61.078 66.667 46.90 0.00 45.66 3.86
22 23 2.607750 AAGAGGAGGCGGCTCCAA 60.608 61.111 46.90 0.00 45.66 3.53
23 24 2.585791 GAAGAGGAGGCGGCTCCAAG 62.586 65.000 46.90 0.00 45.66 3.61
24 25 4.168291 GAGGAGGCGGCTCCAAGG 62.168 72.222 46.90 0.00 45.66 3.61
51 52 4.484872 GCGGGGCCCAGGTAAGTC 62.485 72.222 26.86 1.48 0.00 3.01
52 53 3.793888 CGGGGCCCAGGTAAGTCC 61.794 72.222 26.86 0.61 0.00 3.85
53 54 3.417779 GGGGCCCAGGTAAGTCCC 61.418 72.222 26.86 0.00 36.75 4.46
54 55 3.793888 GGGCCCAGGTAAGTCCCG 61.794 72.222 19.95 0.00 36.75 5.14
55 56 3.007323 GGCCCAGGTAAGTCCCGT 61.007 66.667 0.00 0.00 36.75 5.28
56 57 2.582978 GCCCAGGTAAGTCCCGTC 59.417 66.667 0.00 0.00 36.75 4.79
57 58 2.890371 CCCAGGTAAGTCCCGTCG 59.110 66.667 0.00 0.00 36.75 5.12
58 59 2.183555 CCAGGTAAGTCCCGTCGC 59.816 66.667 0.00 0.00 36.75 5.19
59 60 2.183555 CAGGTAAGTCCCGTCGCC 59.816 66.667 0.00 0.00 36.75 5.54
60 61 3.446570 AGGTAAGTCCCGTCGCCG 61.447 66.667 0.00 0.00 36.75 6.46
77 78 3.773154 GGCCCTCCTCCTCCTCCT 61.773 72.222 0.00 0.00 0.00 3.69
78 79 2.123033 GCCCTCCTCCTCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
79 80 2.612251 CCCTCCTCCTCCTCCTCC 59.388 72.222 0.00 0.00 0.00 4.30
80 81 2.018086 CCCTCCTCCTCCTCCTCCT 61.018 68.421 0.00 0.00 0.00 3.69
81 82 1.541672 CCTCCTCCTCCTCCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
82 83 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
83 84 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
84 85 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
85 86 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
86 87 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
87 88 0.556380 TCCTCCTCCTCCTCCTCCTT 60.556 60.000 0.00 0.00 0.00 3.36
88 89 0.105709 CCTCCTCCTCCTCCTCCTTC 60.106 65.000 0.00 0.00 0.00 3.46
89 90 0.467290 CTCCTCCTCCTCCTCCTTCG 60.467 65.000 0.00 0.00 0.00 3.79
90 91 1.456705 CCTCCTCCTCCTCCTTCGG 60.457 68.421 0.00 0.00 0.00 4.30
91 92 1.308326 CTCCTCCTCCTCCTTCGGT 59.692 63.158 0.00 0.00 0.00 4.69
92 93 0.551879 CTCCTCCTCCTCCTTCGGTA 59.448 60.000 0.00 0.00 0.00 4.02
93 94 1.005228 TCCTCCTCCTCCTTCGGTAA 58.995 55.000 0.00 0.00 0.00 2.85
94 95 1.112950 CCTCCTCCTCCTTCGGTAAC 58.887 60.000 0.00 0.00 0.00 2.50
106 107 4.545929 GGTAACGGCATACCCACC 57.454 61.111 5.40 0.00 39.59 4.61
120 121 4.389576 CACCGCCGCAGCTTGTTC 62.390 66.667 0.00 0.00 36.60 3.18
125 126 2.282462 CCGCAGCTTGTTCCCCTT 60.282 61.111 0.00 0.00 0.00 3.95
126 127 2.335712 CCGCAGCTTGTTCCCCTTC 61.336 63.158 0.00 0.00 0.00 3.46
127 128 2.335712 CGCAGCTTGTTCCCCTTCC 61.336 63.158 0.00 0.00 0.00 3.46
128 129 1.075659 GCAGCTTGTTCCCCTTCCT 59.924 57.895 0.00 0.00 0.00 3.36
129 130 0.962855 GCAGCTTGTTCCCCTTCCTC 60.963 60.000 0.00 0.00 0.00 3.71
130 131 0.322906 CAGCTTGTTCCCCTTCCTCC 60.323 60.000 0.00 0.00 0.00 4.30
131 132 1.000771 GCTTGTTCCCCTTCCTCCC 60.001 63.158 0.00 0.00 0.00 4.30
132 133 1.789576 GCTTGTTCCCCTTCCTCCCA 61.790 60.000 0.00 0.00 0.00 4.37
133 134 1.002857 CTTGTTCCCCTTCCTCCCAT 58.997 55.000 0.00 0.00 0.00 4.00
134 135 0.704076 TTGTTCCCCTTCCTCCCATG 59.296 55.000 0.00 0.00 0.00 3.66
135 136 1.214305 TGTTCCCCTTCCTCCCATGG 61.214 60.000 4.14 4.14 0.00 3.66
136 137 2.316586 TTCCCCTTCCTCCCATGGC 61.317 63.158 6.09 0.00 0.00 4.40
137 138 4.195334 CCCCTTCCTCCCATGGCG 62.195 72.222 6.09 0.00 0.00 5.69
138 139 4.883354 CCCTTCCTCCCATGGCGC 62.883 72.222 6.09 0.00 0.00 6.53
139 140 4.883354 CCTTCCTCCCATGGCGCC 62.883 72.222 22.73 22.73 0.00 6.53
140 141 4.883354 CTTCCTCCCATGGCGCCC 62.883 72.222 26.77 6.44 0.00 6.13
153 154 3.839432 CGCCCCCGTCTCCTCTTC 61.839 72.222 0.00 0.00 0.00 2.87
154 155 3.471806 GCCCCCGTCTCCTCTTCC 61.472 72.222 0.00 0.00 0.00 3.46
155 156 3.148279 CCCCCGTCTCCTCTTCCG 61.148 72.222 0.00 0.00 0.00 4.30
156 157 3.839432 CCCCGTCTCCTCTTCCGC 61.839 72.222 0.00 0.00 0.00 5.54
157 158 2.756283 CCCGTCTCCTCTTCCGCT 60.756 66.667 0.00 0.00 0.00 5.52
158 159 2.776913 CCCGTCTCCTCTTCCGCTC 61.777 68.421 0.00 0.00 0.00 5.03
159 160 2.405594 CGTCTCCTCTTCCGCTCG 59.594 66.667 0.00 0.00 0.00 5.03
160 161 2.107292 CGTCTCCTCTTCCGCTCGA 61.107 63.158 0.00 0.00 0.00 4.04
161 162 1.440938 CGTCTCCTCTTCCGCTCGAT 61.441 60.000 0.00 0.00 0.00 3.59
162 163 0.030101 GTCTCCTCTTCCGCTCGATG 59.970 60.000 0.00 0.00 0.00 3.84
163 164 0.394488 TCTCCTCTTCCGCTCGATGT 60.394 55.000 0.00 0.00 0.00 3.06
164 165 0.030101 CTCCTCTTCCGCTCGATGTC 59.970 60.000 0.00 0.00 0.00 3.06
165 166 1.066587 CCTCTTCCGCTCGATGTCC 59.933 63.158 0.00 0.00 0.00 4.02
166 167 1.388065 CCTCTTCCGCTCGATGTCCT 61.388 60.000 0.00 0.00 0.00 3.85
167 168 0.030101 CTCTTCCGCTCGATGTCCTC 59.970 60.000 0.00 0.00 0.00 3.71
168 169 1.066587 CTTCCGCTCGATGTCCTCC 59.933 63.158 0.00 0.00 0.00 4.30
169 170 1.379977 TTCCGCTCGATGTCCTCCT 60.380 57.895 0.00 0.00 0.00 3.69
170 171 1.384989 TTCCGCTCGATGTCCTCCTC 61.385 60.000 0.00 0.00 0.00 3.71
171 172 2.725008 CGCTCGATGTCCTCCTCC 59.275 66.667 0.00 0.00 0.00 4.30
172 173 2.851071 CGCTCGATGTCCTCCTCCC 61.851 68.421 0.00 0.00 0.00 4.30
173 174 1.758514 GCTCGATGTCCTCCTCCCA 60.759 63.158 0.00 0.00 0.00 4.37
174 175 1.118356 GCTCGATGTCCTCCTCCCAT 61.118 60.000 0.00 0.00 0.00 4.00
175 176 0.678395 CTCGATGTCCTCCTCCCATG 59.322 60.000 0.00 0.00 0.00 3.66
176 177 0.760567 TCGATGTCCTCCTCCCATGG 60.761 60.000 4.14 4.14 0.00 3.66
177 178 1.453669 GATGTCCTCCTCCCATGGC 59.546 63.158 6.09 0.00 0.00 4.40
178 179 2.061790 GATGTCCTCCTCCCATGGCC 62.062 65.000 6.09 0.00 0.00 5.36
179 180 3.866582 GTCCTCCTCCCATGGCCG 61.867 72.222 6.09 0.00 0.00 6.13
196 197 4.301027 GCCACGGCCGGGATCTAG 62.301 72.222 33.49 13.50 34.56 2.43
197 198 4.301027 CCACGGCCGGGATCTAGC 62.301 72.222 33.49 0.00 0.00 3.42
198 199 4.301027 CACGGCCGGGATCTAGCC 62.301 72.222 31.76 10.14 43.53 3.93
201 202 3.992317 GGCCGGGATCTAGCCGTC 61.992 72.222 2.18 0.00 36.84 4.79
202 203 3.992317 GCCGGGATCTAGCCGTCC 61.992 72.222 2.18 3.87 0.00 4.79
203 204 2.520982 CCGGGATCTAGCCGTCCA 60.521 66.667 7.91 0.00 36.19 4.02
204 205 2.728817 CGGGATCTAGCCGTCCAC 59.271 66.667 9.80 1.35 36.19 4.02
205 206 2.857744 CGGGATCTAGCCGTCCACC 61.858 68.421 9.80 0.00 36.19 4.61
206 207 2.728817 GGATCTAGCCGTCCACCG 59.271 66.667 0.00 0.00 34.57 4.94
207 208 2.027751 GATCTAGCCGTCCACCGC 59.972 66.667 0.00 0.00 34.38 5.68
208 209 3.501458 GATCTAGCCGTCCACCGCC 62.501 68.421 0.00 0.00 34.38 6.13
227 228 4.824515 CTCGCCTCCTCCTCCCGT 62.825 72.222 0.00 0.00 0.00 5.28
228 229 3.414193 TCGCCTCCTCCTCCCGTA 61.414 66.667 0.00 0.00 0.00 4.02
229 230 2.907917 CGCCTCCTCCTCCCGTAG 60.908 72.222 0.00 0.00 0.00 3.51
230 231 3.228017 GCCTCCTCCTCCCGTAGC 61.228 72.222 0.00 0.00 0.00 3.58
231 232 2.604152 CCTCCTCCTCCCGTAGCT 59.396 66.667 0.00 0.00 0.00 3.32
232 233 1.529713 CCTCCTCCTCCCGTAGCTC 60.530 68.421 0.00 0.00 0.00 4.09
233 234 1.534697 CTCCTCCTCCCGTAGCTCT 59.465 63.158 0.00 0.00 0.00 4.09
234 235 0.821711 CTCCTCCTCCCGTAGCTCTG 60.822 65.000 0.00 0.00 0.00 3.35
235 236 2.494530 CCTCCTCCCGTAGCTCTGC 61.495 68.421 0.00 0.00 0.00 4.26
236 237 1.454847 CTCCTCCCGTAGCTCTGCT 60.455 63.158 0.00 0.00 43.41 4.24
237 238 1.000486 TCCTCCCGTAGCTCTGCTT 60.000 57.895 0.00 0.00 40.44 3.91
238 239 1.038130 TCCTCCCGTAGCTCTGCTTC 61.038 60.000 0.00 0.00 40.44 3.86
239 240 1.064946 CTCCCGTAGCTCTGCTTCG 59.935 63.158 10.73 10.73 46.11 3.79
244 245 2.932906 GTAGCTCTGCTTCGACGTC 58.067 57.895 5.18 5.18 40.44 4.34
245 246 0.523757 GTAGCTCTGCTTCGACGTCC 60.524 60.000 10.58 0.00 40.44 4.79
246 247 1.654954 TAGCTCTGCTTCGACGTCCC 61.655 60.000 10.58 0.00 40.44 4.46
247 248 2.995872 GCTCTGCTTCGACGTCCCT 61.996 63.158 10.58 0.00 0.00 4.20
248 249 1.587054 CTCTGCTTCGACGTCCCTT 59.413 57.895 10.58 0.00 0.00 3.95
249 250 0.456995 CTCTGCTTCGACGTCCCTTC 60.457 60.000 10.58 0.00 0.00 3.46
250 251 1.176619 TCTGCTTCGACGTCCCTTCA 61.177 55.000 10.58 2.67 0.00 3.02
251 252 0.108615 CTGCTTCGACGTCCCTTCAT 60.109 55.000 10.58 0.00 0.00 2.57
252 253 0.389817 TGCTTCGACGTCCCTTCATG 60.390 55.000 10.58 0.00 0.00 3.07
253 254 1.696832 GCTTCGACGTCCCTTCATGC 61.697 60.000 10.58 1.54 0.00 4.06
254 255 1.079405 TTCGACGTCCCTTCATGCC 60.079 57.895 10.58 0.00 0.00 4.40
255 256 1.822114 TTCGACGTCCCTTCATGCCA 61.822 55.000 10.58 0.00 0.00 4.92
256 257 2.100631 CGACGTCCCTTCATGCCAC 61.101 63.158 10.58 0.00 0.00 5.01
257 258 1.745489 GACGTCCCTTCATGCCACC 60.745 63.158 3.51 0.00 0.00 4.61
258 259 2.819595 CGTCCCTTCATGCCACCG 60.820 66.667 0.00 0.00 0.00 4.94
259 260 2.438434 GTCCCTTCATGCCACCGG 60.438 66.667 0.00 0.00 0.00 5.28
260 261 2.609299 TCCCTTCATGCCACCGGA 60.609 61.111 9.46 0.00 0.00 5.14
261 262 2.438434 CCCTTCATGCCACCGGAC 60.438 66.667 9.46 0.00 0.00 4.79
262 263 2.438434 CCTTCATGCCACCGGACC 60.438 66.667 9.46 0.00 0.00 4.46
263 264 2.671070 CTTCATGCCACCGGACCT 59.329 61.111 9.46 0.00 0.00 3.85
264 265 1.450312 CTTCATGCCACCGGACCTC 60.450 63.158 9.46 0.00 0.00 3.85
265 266 2.876368 CTTCATGCCACCGGACCTCC 62.876 65.000 9.46 0.00 0.00 4.30
266 267 3.402681 CATGCCACCGGACCTCCT 61.403 66.667 9.46 0.00 0.00 3.69
267 268 3.083997 ATGCCACCGGACCTCCTC 61.084 66.667 9.46 0.00 0.00 3.71
270 271 2.760385 CCACCGGACCTCCTCCTC 60.760 72.222 9.46 0.00 36.80 3.71
271 272 2.760385 CACCGGACCTCCTCCTCC 60.760 72.222 9.46 0.00 36.80 4.30
272 273 2.947785 ACCGGACCTCCTCCTCCT 60.948 66.667 9.46 0.00 36.80 3.69
273 274 2.123640 CCGGACCTCCTCCTCCTC 60.124 72.222 0.00 0.00 36.80 3.71
274 275 2.123640 CGGACCTCCTCCTCCTCC 60.124 72.222 0.00 0.00 36.80 4.30
275 276 2.695970 CGGACCTCCTCCTCCTCCT 61.696 68.421 0.00 0.00 36.80 3.69
276 277 1.231928 GGACCTCCTCCTCCTCCTC 59.768 68.421 0.00 0.00 35.89 3.71
277 278 1.293683 GGACCTCCTCCTCCTCCTCT 61.294 65.000 0.00 0.00 35.89 3.69
278 279 0.106217 GACCTCCTCCTCCTCCTCTG 60.106 65.000 0.00 0.00 0.00 3.35
279 280 1.457455 CCTCCTCCTCCTCCTCTGC 60.457 68.421 0.00 0.00 0.00 4.26
280 281 1.457455 CTCCTCCTCCTCCTCTGCC 60.457 68.421 0.00 0.00 0.00 4.85
281 282 2.837291 CCTCCTCCTCCTCTGCCG 60.837 72.222 0.00 0.00 0.00 5.69
282 283 3.535962 CTCCTCCTCCTCTGCCGC 61.536 72.222 0.00 0.00 0.00 6.53
288 289 4.394712 CTCCTCTGCCGCCGGTTT 62.395 66.667 4.45 0.00 0.00 3.27
289 290 4.388499 TCCTCTGCCGCCGGTTTC 62.388 66.667 4.45 0.00 0.00 2.78
295 296 4.796495 GCCGCCGGTTTCCCATCT 62.796 66.667 4.45 0.00 0.00 2.90
296 297 2.513897 CCGCCGGTTTCCCATCTC 60.514 66.667 1.90 0.00 0.00 2.75
297 298 2.890474 CGCCGGTTTCCCATCTCG 60.890 66.667 1.90 0.00 0.00 4.04
298 299 2.267961 GCCGGTTTCCCATCTCGT 59.732 61.111 1.90 0.00 0.00 4.18
299 300 1.814169 GCCGGTTTCCCATCTCGTC 60.814 63.158 1.90 0.00 0.00 4.20
300 301 1.898154 CCGGTTTCCCATCTCGTCT 59.102 57.895 0.00 0.00 0.00 4.18
301 302 0.460284 CCGGTTTCCCATCTCGTCTG 60.460 60.000 0.00 0.00 0.00 3.51
302 303 1.084370 CGGTTTCCCATCTCGTCTGC 61.084 60.000 0.00 0.00 0.00 4.26
303 304 0.250513 GGTTTCCCATCTCGTCTGCT 59.749 55.000 0.00 0.00 0.00 4.24
304 305 1.646189 GTTTCCCATCTCGTCTGCTC 58.354 55.000 0.00 0.00 0.00 4.26
305 306 0.537188 TTTCCCATCTCGTCTGCTCC 59.463 55.000 0.00 0.00 0.00 4.70
306 307 0.324738 TTCCCATCTCGTCTGCTCCT 60.325 55.000 0.00 0.00 0.00 3.69
307 308 0.324738 TCCCATCTCGTCTGCTCCTT 60.325 55.000 0.00 0.00 0.00 3.36
308 309 0.103937 CCCATCTCGTCTGCTCCTTC 59.896 60.000 0.00 0.00 0.00 3.46
309 310 0.103937 CCATCTCGTCTGCTCCTTCC 59.896 60.000 0.00 0.00 0.00 3.46
310 311 0.820226 CATCTCGTCTGCTCCTTCCA 59.180 55.000 0.00 0.00 0.00 3.53
311 312 0.820871 ATCTCGTCTGCTCCTTCCAC 59.179 55.000 0.00 0.00 0.00 4.02
312 313 0.539669 TCTCGTCTGCTCCTTCCACA 60.540 55.000 0.00 0.00 0.00 4.17
313 314 0.534412 CTCGTCTGCTCCTTCCACAT 59.466 55.000 0.00 0.00 0.00 3.21
314 315 0.247460 TCGTCTGCTCCTTCCACATG 59.753 55.000 0.00 0.00 0.00 3.21
315 316 1.364626 CGTCTGCTCCTTCCACATGC 61.365 60.000 0.00 0.00 0.00 4.06
316 317 1.078918 TCTGCTCCTTCCACATGCG 60.079 57.895 0.00 0.00 0.00 4.73
317 318 2.747460 TGCTCCTTCCACATGCGC 60.747 61.111 0.00 0.00 0.00 6.09
318 319 2.437359 GCTCCTTCCACATGCGCT 60.437 61.111 9.73 0.00 0.00 5.92
319 320 2.042831 GCTCCTTCCACATGCGCTT 61.043 57.895 9.73 0.00 0.00 4.68
320 321 1.986575 GCTCCTTCCACATGCGCTTC 61.987 60.000 9.73 0.00 0.00 3.86
321 322 0.392193 CTCCTTCCACATGCGCTTCT 60.392 55.000 9.73 0.00 0.00 2.85
322 323 0.674581 TCCTTCCACATGCGCTTCTG 60.675 55.000 9.73 6.29 0.00 3.02
323 324 1.136147 CTTCCACATGCGCTTCTGC 59.864 57.895 9.73 0.00 0.00 4.26
324 325 1.302752 TTCCACATGCGCTTCTGCT 60.303 52.632 9.73 0.00 36.97 4.24
325 326 1.579964 TTCCACATGCGCTTCTGCTG 61.580 55.000 9.73 5.15 36.97 4.41
326 327 2.330372 CCACATGCGCTTCTGCTGT 61.330 57.895 9.73 0.00 36.97 4.40
327 328 1.134075 CACATGCGCTTCTGCTGTC 59.866 57.895 9.73 0.00 36.97 3.51
328 329 1.301953 ACATGCGCTTCTGCTGTCA 60.302 52.632 9.73 0.00 36.97 3.58
329 330 1.296755 ACATGCGCTTCTGCTGTCAG 61.297 55.000 9.73 0.00 41.67 3.51
330 331 1.017701 CATGCGCTTCTGCTGTCAGA 61.018 55.000 9.73 0.00 46.90 3.27
337 338 2.907703 TCTGCTGTCAGATCCCCTC 58.092 57.895 3.32 0.00 43.95 4.30
338 339 0.689080 TCTGCTGTCAGATCCCCTCC 60.689 60.000 3.32 0.00 43.95 4.30
339 340 0.690411 CTGCTGTCAGATCCCCTCCT 60.690 60.000 3.32 0.00 42.95 3.69
340 341 0.252881 TGCTGTCAGATCCCCTCCTT 60.253 55.000 3.32 0.00 0.00 3.36
341 342 0.467804 GCTGTCAGATCCCCTCCTTC 59.532 60.000 3.32 0.00 0.00 3.46
342 343 1.969240 GCTGTCAGATCCCCTCCTTCT 60.969 57.143 3.32 0.00 0.00 2.85
343 344 2.476199 CTGTCAGATCCCCTCCTTCTT 58.524 52.381 0.00 0.00 0.00 2.52
344 345 2.433970 CTGTCAGATCCCCTCCTTCTTC 59.566 54.545 0.00 0.00 0.00 2.87
345 346 1.765904 GTCAGATCCCCTCCTTCTTCC 59.234 57.143 0.00 0.00 0.00 3.46
346 347 1.135960 CAGATCCCCTCCTTCTTCCC 58.864 60.000 0.00 0.00 0.00 3.97
347 348 0.725133 AGATCCCCTCCTTCTTCCCA 59.275 55.000 0.00 0.00 0.00 4.37
348 349 1.082879 AGATCCCCTCCTTCTTCCCAA 59.917 52.381 0.00 0.00 0.00 4.12
349 350 1.492599 GATCCCCTCCTTCTTCCCAAG 59.507 57.143 0.00 0.00 0.00 3.61
350 351 1.208165 TCCCCTCCTTCTTCCCAAGC 61.208 60.000 0.00 0.00 0.00 4.01
351 352 1.210885 CCCCTCCTTCTTCCCAAGCT 61.211 60.000 0.00 0.00 0.00 3.74
352 353 0.701147 CCCTCCTTCTTCCCAAGCTT 59.299 55.000 0.00 0.00 0.00 3.74
353 354 1.076187 CCCTCCTTCTTCCCAAGCTTT 59.924 52.381 0.00 0.00 0.00 3.51
354 355 2.441410 CCTCCTTCTTCCCAAGCTTTC 58.559 52.381 0.00 0.00 0.00 2.62
355 356 2.040947 CCTCCTTCTTCCCAAGCTTTCT 59.959 50.000 0.00 0.00 0.00 2.52
356 357 3.499382 CCTCCTTCTTCCCAAGCTTTCTT 60.499 47.826 0.00 0.00 0.00 2.52
358 359 2.029560 CCTTCTTCCCAAGCTTTCTTGC 60.030 50.000 0.00 0.00 46.38 4.01
359 360 2.664402 TCTTCCCAAGCTTTCTTGCT 57.336 45.000 0.00 0.00 46.38 3.91
371 372 6.025749 AGCTTTCTTGCTTTAATGTTACCC 57.974 37.500 0.00 0.00 40.93 3.69
372 373 5.775195 AGCTTTCTTGCTTTAATGTTACCCT 59.225 36.000 0.00 0.00 40.93 4.34
373 374 5.863935 GCTTTCTTGCTTTAATGTTACCCTG 59.136 40.000 0.00 0.00 0.00 4.45
374 375 6.294508 GCTTTCTTGCTTTAATGTTACCCTGA 60.295 38.462 0.00 0.00 0.00 3.86
375 376 7.577616 GCTTTCTTGCTTTAATGTTACCCTGAT 60.578 37.037 0.00 0.00 0.00 2.90
376 377 8.871629 TTTCTTGCTTTAATGTTACCCTGATA 57.128 30.769 0.00 0.00 0.00 2.15
377 378 9.474313 TTTCTTGCTTTAATGTTACCCTGATAT 57.526 29.630 0.00 0.00 0.00 1.63
378 379 8.450578 TCTTGCTTTAATGTTACCCTGATATG 57.549 34.615 0.00 0.00 0.00 1.78
379 380 8.271458 TCTTGCTTTAATGTTACCCTGATATGA 58.729 33.333 0.00 0.00 0.00 2.15
380 381 8.815565 TTGCTTTAATGTTACCCTGATATGAA 57.184 30.769 0.00 0.00 0.00 2.57
381 382 8.220755 TGCTTTAATGTTACCCTGATATGAAC 57.779 34.615 0.00 0.00 0.00 3.18
382 383 7.831690 TGCTTTAATGTTACCCTGATATGAACA 59.168 33.333 0.00 0.00 34.73 3.18
383 384 8.850156 GCTTTAATGTTACCCTGATATGAACAT 58.150 33.333 0.00 0.00 41.32 2.71
386 387 9.693739 TTAATGTTACCCTGATATGAACATTGT 57.306 29.630 17.25 0.00 45.52 2.71
387 388 8.593945 AATGTTACCCTGATATGAACATTGTT 57.406 30.769 0.63 0.63 44.74 2.83
388 389 7.624360 TGTTACCCTGATATGAACATTGTTC 57.376 36.000 20.27 20.27 0.00 3.18
389 390 6.601613 TGTTACCCTGATATGAACATTGTTCC 59.398 38.462 23.22 10.79 0.00 3.62
390 391 5.191727 ACCCTGATATGAACATTGTTCCA 57.808 39.130 23.22 14.18 0.00 3.53
391 392 5.195940 ACCCTGATATGAACATTGTTCCAG 58.804 41.667 23.22 20.71 0.00 3.86
392 393 4.037208 CCCTGATATGAACATTGTTCCAGC 59.963 45.833 23.22 15.43 0.00 4.85
393 394 4.037208 CCTGATATGAACATTGTTCCAGCC 59.963 45.833 23.22 12.49 0.00 4.85
394 395 4.858850 TGATATGAACATTGTTCCAGCCT 58.141 39.130 23.22 6.91 0.00 4.58
395 396 5.263599 TGATATGAACATTGTTCCAGCCTT 58.736 37.500 23.22 5.85 0.00 4.35
396 397 5.357878 TGATATGAACATTGTTCCAGCCTTC 59.642 40.000 23.22 13.17 0.00 3.46
397 398 2.238521 TGAACATTGTTCCAGCCTTCC 58.761 47.619 23.22 0.43 0.00 3.46
398 399 2.238521 GAACATTGTTCCAGCCTTCCA 58.761 47.619 17.07 0.00 0.00 3.53
399 400 2.610438 ACATTGTTCCAGCCTTCCAT 57.390 45.000 0.00 0.00 0.00 3.41
400 401 2.450476 ACATTGTTCCAGCCTTCCATC 58.550 47.619 0.00 0.00 0.00 3.51
401 402 2.042162 ACATTGTTCCAGCCTTCCATCT 59.958 45.455 0.00 0.00 0.00 2.90
402 403 2.978156 TTGTTCCAGCCTTCCATCTT 57.022 45.000 0.00 0.00 0.00 2.40
403 404 2.496899 TGTTCCAGCCTTCCATCTTC 57.503 50.000 0.00 0.00 0.00 2.87
404 405 1.988107 TGTTCCAGCCTTCCATCTTCT 59.012 47.619 0.00 0.00 0.00 2.85
405 406 2.026822 TGTTCCAGCCTTCCATCTTCTC 60.027 50.000 0.00 0.00 0.00 2.87
406 407 2.238395 GTTCCAGCCTTCCATCTTCTCT 59.762 50.000 0.00 0.00 0.00 3.10
407 408 2.555664 TCCAGCCTTCCATCTTCTCTT 58.444 47.619 0.00 0.00 0.00 2.85
408 409 2.238144 TCCAGCCTTCCATCTTCTCTTG 59.762 50.000 0.00 0.00 0.00 3.02
409 410 2.238144 CCAGCCTTCCATCTTCTCTTGA 59.762 50.000 0.00 0.00 0.00 3.02
410 411 3.117963 CCAGCCTTCCATCTTCTCTTGAT 60.118 47.826 0.00 0.00 0.00 2.57
411 412 4.525024 CAGCCTTCCATCTTCTCTTGATT 58.475 43.478 0.00 0.00 0.00 2.57
412 413 4.335874 CAGCCTTCCATCTTCTCTTGATTG 59.664 45.833 0.00 0.00 0.00 2.67
413 414 4.018597 AGCCTTCCATCTTCTCTTGATTGT 60.019 41.667 0.00 0.00 0.00 2.71
414 415 4.335037 GCCTTCCATCTTCTCTTGATTGTC 59.665 45.833 0.00 0.00 0.00 3.18
415 416 5.743117 CCTTCCATCTTCTCTTGATTGTCT 58.257 41.667 0.00 0.00 0.00 3.41
416 417 6.631314 GCCTTCCATCTTCTCTTGATTGTCTA 60.631 42.308 0.00 0.00 0.00 2.59
417 418 7.507829 CCTTCCATCTTCTCTTGATTGTCTAT 58.492 38.462 0.00 0.00 0.00 1.98
418 419 8.646004 CCTTCCATCTTCTCTTGATTGTCTATA 58.354 37.037 0.00 0.00 0.00 1.31
419 420 9.474920 CTTCCATCTTCTCTTGATTGTCTATAC 57.525 37.037 0.00 0.00 0.00 1.47
420 421 8.539117 TCCATCTTCTCTTGATTGTCTATACA 57.461 34.615 0.00 0.00 0.00 2.29
421 422 8.637099 TCCATCTTCTCTTGATTGTCTATACAG 58.363 37.037 0.00 0.00 36.83 2.74
422 423 8.637099 CCATCTTCTCTTGATTGTCTATACAGA 58.363 37.037 0.00 0.00 36.83 3.41
423 424 9.681692 CATCTTCTCTTGATTGTCTATACAGAG 57.318 37.037 0.00 0.00 36.83 3.35
424 425 8.231692 TCTTCTCTTGATTGTCTATACAGAGG 57.768 38.462 0.00 0.00 36.83 3.69
425 426 6.398234 TCTCTTGATTGTCTATACAGAGGC 57.602 41.667 0.00 0.00 36.83 4.70
426 427 5.303078 TCTCTTGATTGTCTATACAGAGGCC 59.697 44.000 0.00 0.00 36.83 5.19
427 428 5.211973 TCTTGATTGTCTATACAGAGGCCT 58.788 41.667 3.86 3.86 36.83 5.19
428 429 5.303078 TCTTGATTGTCTATACAGAGGCCTC 59.697 44.000 26.22 26.22 36.83 4.70
429 430 3.898123 TGATTGTCTATACAGAGGCCTCC 59.102 47.826 29.54 11.67 36.83 4.30
430 431 3.398318 TTGTCTATACAGAGGCCTCCA 57.602 47.619 29.54 15.26 36.83 3.86
431 432 3.398318 TGTCTATACAGAGGCCTCCAA 57.602 47.619 29.54 15.23 0.00 3.53
432 433 3.928754 TGTCTATACAGAGGCCTCCAAT 58.071 45.455 29.54 20.85 0.00 3.16
433 434 5.074746 TGTCTATACAGAGGCCTCCAATA 57.925 43.478 29.54 20.85 0.00 1.90
434 435 4.833380 TGTCTATACAGAGGCCTCCAATAC 59.167 45.833 29.54 17.49 0.00 1.89
435 436 4.833380 GTCTATACAGAGGCCTCCAATACA 59.167 45.833 29.54 9.44 0.00 2.29
436 437 5.047660 GTCTATACAGAGGCCTCCAATACAG 60.048 48.000 29.54 16.78 0.00 2.74
437 438 2.254152 ACAGAGGCCTCCAATACAGA 57.746 50.000 29.54 0.00 0.00 3.41
438 439 1.834263 ACAGAGGCCTCCAATACAGAC 59.166 52.381 29.54 0.17 0.00 3.51
439 440 1.833630 CAGAGGCCTCCAATACAGACA 59.166 52.381 29.54 0.00 0.00 3.41
440 441 2.437281 CAGAGGCCTCCAATACAGACAT 59.563 50.000 29.54 2.69 0.00 3.06
441 442 2.703007 AGAGGCCTCCAATACAGACATC 59.297 50.000 29.54 0.00 0.00 3.06
442 443 1.771255 AGGCCTCCAATACAGACATCC 59.229 52.381 0.00 0.00 0.00 3.51
443 444 1.490490 GGCCTCCAATACAGACATCCA 59.510 52.381 0.00 0.00 0.00 3.41
444 445 2.092429 GGCCTCCAATACAGACATCCAA 60.092 50.000 0.00 0.00 0.00 3.53
445 446 3.620488 GCCTCCAATACAGACATCCAAA 58.380 45.455 0.00 0.00 0.00 3.28
446 447 3.378427 GCCTCCAATACAGACATCCAAAC 59.622 47.826 0.00 0.00 0.00 2.93
447 448 3.623060 CCTCCAATACAGACATCCAAACG 59.377 47.826 0.00 0.00 0.00 3.60
448 449 3.006940 TCCAATACAGACATCCAAACGC 58.993 45.455 0.00 0.00 0.00 4.84
449 450 2.746904 CCAATACAGACATCCAAACGCA 59.253 45.455 0.00 0.00 0.00 5.24
450 451 3.181507 CCAATACAGACATCCAAACGCAG 60.182 47.826 0.00 0.00 0.00 5.18
451 452 1.438651 TACAGACATCCAAACGCAGC 58.561 50.000 0.00 0.00 0.00 5.25
452 453 0.534877 ACAGACATCCAAACGCAGCA 60.535 50.000 0.00 0.00 0.00 4.41
453 454 0.167470 CAGACATCCAAACGCAGCAG 59.833 55.000 0.00 0.00 0.00 4.24
454 455 1.154150 GACATCCAAACGCAGCAGC 60.154 57.895 0.00 0.00 37.42 5.25
467 468 1.530646 GCAGCAGCGTTAGAGATTTGC 60.531 52.381 0.00 0.00 0.00 3.68
469 470 2.030213 CAGCAGCGTTAGAGATTTGCTC 59.970 50.000 0.00 0.00 39.66 4.26
487 488 3.129871 GCTCTACTTGATGACCTGATGC 58.870 50.000 0.00 0.00 0.00 3.91
560 561 2.939022 GCATCCGCTTGTATCGGC 59.061 61.111 0.00 0.00 46.05 5.54
567 568 0.460284 CGCTTGTATCGGCTGGTCTT 60.460 55.000 0.00 0.00 0.00 3.01
574 575 4.018490 TGTATCGGCTGGTCTTGTTAGTA 58.982 43.478 0.00 0.00 0.00 1.82
635 636 4.199432 AGATAATCTGGATGCTAAGCGG 57.801 45.455 0.00 0.00 0.00 5.52
657 658 1.950954 GCCTTAGGGTTCAGCCTGTTC 60.951 57.143 7.87 0.00 37.43 3.18
663 664 1.235281 GGTTCAGCCTGTTCGGTTCC 61.235 60.000 0.00 0.00 34.25 3.62
679 680 4.455533 TCGGTTCCATTCAATCTTGTTCAG 59.544 41.667 0.00 0.00 0.00 3.02
692 693 7.336931 TCAATCTTGTTCAGCCCTACTTATTTC 59.663 37.037 0.00 0.00 0.00 2.17
739 740 0.972883 CCCCAGGTCTAGCTAGCATC 59.027 60.000 18.83 8.58 0.00 3.91
749 750 6.381420 AGGTCTAGCTAGCATCTTAGACAAAA 59.619 38.462 28.83 4.40 36.57 2.44
764 765 9.219603 TCTTAGACAAAATTAGTTGTGATCTGG 57.780 33.333 0.25 0.00 41.78 3.86
765 766 8.918202 TTAGACAAAATTAGTTGTGATCTGGT 57.082 30.769 0.25 0.00 41.78 4.00
786 787 5.046159 TGGTTGGTACCTATGTCAAGTTAGG 60.046 44.000 14.36 0.00 45.27 2.69
787 788 4.748277 TGGTACCTATGTCAAGTTAGGC 57.252 45.455 14.36 0.00 38.88 3.93
788 789 4.098155 TGGTACCTATGTCAAGTTAGGCA 58.902 43.478 14.36 0.00 38.88 4.75
789 790 4.719773 TGGTACCTATGTCAAGTTAGGCAT 59.280 41.667 14.36 0.00 38.88 4.40
790 791 5.900699 TGGTACCTATGTCAAGTTAGGCATA 59.099 40.000 14.36 0.00 38.88 3.14
791 792 6.183360 TGGTACCTATGTCAAGTTAGGCATAC 60.183 42.308 14.36 0.00 38.88 2.39
792 793 6.041751 GGTACCTATGTCAAGTTAGGCATACT 59.958 42.308 4.06 0.00 38.88 2.12
793 794 6.561519 ACCTATGTCAAGTTAGGCATACTT 57.438 37.500 0.00 0.00 38.88 2.24
794 795 7.670605 ACCTATGTCAAGTTAGGCATACTTA 57.329 36.000 4.29 0.00 38.88 2.24
795 796 7.727181 ACCTATGTCAAGTTAGGCATACTTAG 58.273 38.462 4.29 0.00 38.88 2.18
796 797 7.344871 ACCTATGTCAAGTTAGGCATACTTAGT 59.655 37.037 4.29 0.00 38.88 2.24
809 810 6.042897 AGGCATACTTAGTAACCAATCCTACC 59.957 42.308 14.54 0.00 0.00 3.18
823 824 2.972625 TCCTACCGCTGAATGAAACTG 58.027 47.619 0.00 0.00 0.00 3.16
848 849 6.912951 TGGGAGTTTATCTAGTACCTATGC 57.087 41.667 0.00 0.00 0.00 3.14
874 876 6.699575 AGTTAGGCATTGGATGATTTGTAC 57.300 37.500 0.00 0.00 0.00 2.90
904 908 8.621286 GTTTAGTCAGAATTTCCAGTTTGAGAA 58.379 33.333 0.00 0.00 0.00 2.87
989 1012 2.105930 CCTGCTCTCTGTAGGCGC 59.894 66.667 0.00 0.00 41.51 6.53
1068 1091 2.359850 CTGCCTGCCGCCAAACTA 60.360 61.111 0.00 0.00 36.24 2.24
1326 1349 1.559682 ACAAGGTTGCCATCGATAGGT 59.440 47.619 0.00 0.00 0.00 3.08
1334 1357 1.475034 GCCATCGATAGGTTGCTCCAA 60.475 52.381 0.00 0.00 39.02 3.53
1343 1366 0.690762 GGTTGCTCCAACTCAGGGTA 59.309 55.000 7.88 0.00 43.14 3.69
1418 1441 7.624360 TGGTATGTATGGTTGAGATTTTCAC 57.376 36.000 0.00 0.00 34.94 3.18
1424 1447 6.878923 TGTATGGTTGAGATTTTCACGAAGAT 59.121 34.615 0.00 0.00 34.94 2.40
1434 1457 9.878599 GAGATTTTCACGAAGATCTTTTTAACA 57.121 29.630 9.87 0.00 40.84 2.41
1450 1473 6.925610 TTTTAACATTCCTGGATCTGATCG 57.074 37.500 11.28 0.00 0.00 3.69
1462 1485 4.037327 TGGATCTGATCGACTAGCAAAGAG 59.963 45.833 11.28 0.00 0.00 2.85
1517 1540 6.756542 GGTGATTTTTATTTGCCATAGTGACC 59.243 38.462 0.00 0.00 0.00 4.02
1559 1582 7.677454 TGCCATCTGTTATATCTTTAGCATG 57.323 36.000 0.00 0.00 0.00 4.06
1609 1632 4.096382 ACCAAGTTGCTGAAATATTAGCGG 59.904 41.667 0.00 3.59 42.74 5.52
1643 1666 9.819267 ATTCTAATTAGAGGTAGTAAACAGTGC 57.181 33.333 14.63 0.00 33.21 4.40
1659 1682 1.173913 GTGCCTGGCTCCGTTATTTT 58.826 50.000 21.03 0.00 0.00 1.82
1660 1683 1.135402 GTGCCTGGCTCCGTTATTTTG 60.135 52.381 21.03 0.00 0.00 2.44
1664 1687 3.278574 CCTGGCTCCGTTATTTTGATGA 58.721 45.455 0.00 0.00 0.00 2.92
1668 1691 5.680619 TGGCTCCGTTATTTTGATGACTAT 58.319 37.500 0.00 0.00 0.00 2.12
1669 1692 6.119536 TGGCTCCGTTATTTTGATGACTATT 58.880 36.000 0.00 0.00 0.00 1.73
1684 1707 9.967346 TTGATGACTATTCTGTATAAGTGTAGC 57.033 33.333 0.00 0.00 0.00 3.58
1792 1815 3.254060 CTGTGTGCATACTGTGTAGTCC 58.746 50.000 15.05 0.00 38.36 3.85
2003 2026 5.050091 GCTTATTGTCTCACCGTTATGATGG 60.050 44.000 0.00 0.00 37.98 3.51
2333 2357 4.037923 TGACCCTTTCTTTGTTTGCTCATC 59.962 41.667 0.00 0.00 0.00 2.92
2391 2415 6.288294 TGTGTTCACTTCAACTAGTAATGCT 58.712 36.000 0.00 0.00 0.00 3.79
2555 2579 3.761897 CCCCCTTGTTTGACAATCAGTA 58.238 45.455 0.00 0.00 37.48 2.74
2559 2583 3.482786 CTTGTTTGACAATCAGTAGCGC 58.517 45.455 0.00 0.00 37.48 5.92
2605 2629 6.373216 AGCCAAATTTCATTTCAATGACATGG 59.627 34.615 9.23 8.93 44.54 3.66
2682 2706 8.645814 TGTCGGTATGGACATAGTAATATCTT 57.354 34.615 0.00 0.00 41.76 2.40
2724 2748 2.450609 TAAGAAACCGTGAGCTGACC 57.549 50.000 0.00 0.00 0.00 4.02
2890 2914 3.281727 TCTAAAGCCAATAGCCCTGTG 57.718 47.619 0.00 0.00 45.47 3.66
2932 2956 5.437289 TTTCAACTGGCTGTATGTTCAAG 57.563 39.130 0.00 0.00 0.00 3.02
3038 3062 3.525268 CCAGTTTCTGGTTTGTGCTTT 57.475 42.857 7.55 0.00 45.82 3.51
3045 3069 3.141398 TCTGGTTTGTGCTTTAGCTCAG 58.859 45.455 6.59 0.00 43.99 3.35
3062 3086 8.846943 TTAGCTCAGTTGAACAAATTATCTGA 57.153 30.769 0.00 0.00 0.00 3.27
3073 3097 7.390440 TGAACAAATTATCTGACAGATTTCCGT 59.610 33.333 22.63 11.25 36.20 4.69
3091 3115 3.253677 TCCGTCTTCAGTTCTCACTCTTC 59.746 47.826 0.00 0.00 0.00 2.87
3095 3119 3.504134 TCTTCAGTTCTCACTCTTCTCCG 59.496 47.826 0.00 0.00 0.00 4.63
3096 3120 1.542030 TCAGTTCTCACTCTTCTCCGC 59.458 52.381 0.00 0.00 0.00 5.54
3174 3198 0.179045 ATCCGCAGAGGTATTGGTGC 60.179 55.000 0.00 0.00 41.99 5.01
3183 3207 5.737063 GCAGAGGTATTGGTGCCATTTTATG 60.737 44.000 0.00 0.00 31.60 1.90
3188 3212 8.317776 AGGTATTGGTGCCATTTTATGTTTAT 57.682 30.769 0.00 0.00 31.60 1.40
3193 3217 6.212235 TGGTGCCATTTTATGTTTATATGCG 58.788 36.000 0.00 0.00 0.00 4.73
3218 3242 9.782028 CGTTTTGATTTGACATGAGTATTTTTG 57.218 29.630 0.00 0.00 0.00 2.44
3229 3253 7.491682 ACATGAGTATTTTTGTTTGCTGACTT 58.508 30.769 0.00 0.00 0.00 3.01
3263 3288 1.342672 AATAGGAACGCGGGGTGGAT 61.343 55.000 12.47 0.00 0.00 3.41
3287 3312 4.752101 CCCACGGACTTGATATCATTTCTC 59.248 45.833 6.17 0.00 0.00 2.87
3338 3363 7.650504 GGAGCGGTAAAGTAAAACATTCTTTTT 59.349 33.333 0.00 0.00 34.09 1.94
3380 3405 6.300354 ACCATTCAGAAGTGAAAAGTTACG 57.700 37.500 0.00 0.00 45.88 3.18
3419 3444 9.674824 GCAATGATCATTAAAGTCCTATTTCTG 57.325 33.333 20.32 4.75 0.00 3.02
3425 3450 3.695830 AAAGTCCTATTTCTGACGGCA 57.304 42.857 0.00 0.00 36.61 5.69
3440 3465 3.380004 TGACGGCACAGTTTTCTTTCAAT 59.620 39.130 0.00 0.00 0.00 2.57
3481 3506 1.269723 TGAGCAAGAGGTGTACAGACG 59.730 52.381 0.00 0.00 0.00 4.18
3536 3561 5.464722 AGAGATCAATTGTAGCAGTAATGCG 59.535 40.000 9.84 0.00 40.27 4.73
3612 3640 4.827789 TGTTCTATCTAATAGGCAGGGGT 58.172 43.478 0.00 0.00 33.64 4.95
3633 3661 1.611491 TGAGGGCCATCAACGTTTTTC 59.389 47.619 19.65 0.00 0.00 2.29
3649 3677 4.675114 CGTTTTTCCGCCAGATTATATTGC 59.325 41.667 0.00 0.00 0.00 3.56
3742 3803 0.447801 GCTGCTCGGTATGTTGGTTG 59.552 55.000 0.00 0.00 0.00 3.77
3750 3811 4.135306 TCGGTATGTTGGTTGCAACTTAA 58.865 39.130 27.64 19.71 36.15 1.85
3887 3948 4.736126 AACTGCAGCAGGTAAAACTTTT 57.264 36.364 26.38 5.36 35.51 2.27
3888 3949 4.736126 ACTGCAGCAGGTAAAACTTTTT 57.264 36.364 26.38 0.00 35.51 1.94
3889 3950 4.432712 ACTGCAGCAGGTAAAACTTTTTG 58.567 39.130 26.38 0.00 35.51 2.44
4017 4078 1.003349 AGCTTGTCAGATTCAGCTGCT 59.997 47.619 9.47 0.00 35.86 4.24
4057 4118 9.432982 AATAACATCCCATTTCCTTTGCTATTA 57.567 29.630 0.00 0.00 0.00 0.98
4082 4143 6.111382 CAGTTTTATGCTCTCCAGATCTTCA 58.889 40.000 0.00 0.00 0.00 3.02
4084 4145 7.930325 CAGTTTTATGCTCTCCAGATCTTCATA 59.070 37.037 0.00 0.00 0.00 2.15
4086 4147 8.555361 GTTTTATGCTCTCCAGATCTTCATAAC 58.445 37.037 0.00 0.00 0.00 1.89
4087 4148 7.609097 TTATGCTCTCCAGATCTTCATAACT 57.391 36.000 0.00 0.00 0.00 2.24
4131 4195 7.993821 AGTGATACGTAATGAAGATGAACTG 57.006 36.000 0.00 0.00 0.00 3.16
4142 4208 4.593206 TGAAGATGAACTGTTCCACCTACT 59.407 41.667 17.26 5.53 0.00 2.57
4163 4229 9.900710 CCTACTAGTTGATACTGTGATATTGTC 57.099 37.037 0.00 0.00 35.78 3.18
4282 4348 2.464782 TCAGCCATCAGATGAGTGACT 58.535 47.619 12.41 0.00 0.00 3.41
4367 4435 6.382859 TCCTAGTGCTCTTGGTTATCAATACA 59.617 38.462 14.52 0.00 37.71 2.29
4377 4445 8.623903 TCTTGGTTATCAATACATGAAATGCTC 58.376 33.333 0.00 0.00 42.54 4.26
4393 4461 1.160329 GCTCGGTGTGCAGAAGTGTT 61.160 55.000 0.00 0.00 0.00 3.32
4395 4463 2.479837 CTCGGTGTGCAGAAGTGTTAA 58.520 47.619 0.00 0.00 0.00 2.01
4396 4464 2.206750 TCGGTGTGCAGAAGTGTTAAC 58.793 47.619 0.00 0.00 0.00 2.01
4397 4465 1.937223 CGGTGTGCAGAAGTGTTAACA 59.063 47.619 3.59 3.59 0.00 2.41
4408 4476 7.283127 TGCAGAAGTGTTAACATTTTTCTCTCT 59.717 33.333 20.74 10.67 0.00 3.10
4409 4477 7.800847 GCAGAAGTGTTAACATTTTTCTCTCTC 59.199 37.037 20.74 7.95 0.00 3.20
4410 4478 9.050601 CAGAAGTGTTAACATTTTTCTCTCTCT 57.949 33.333 20.74 9.59 0.00 3.10
4411 4479 9.050601 AGAAGTGTTAACATTTTTCTCTCTCTG 57.949 33.333 16.39 0.00 0.00 3.35
4412 4480 8.738645 AAGTGTTAACATTTTTCTCTCTCTGT 57.261 30.769 12.26 0.00 0.00 3.41
4413 4481 8.147642 AGTGTTAACATTTTTCTCTCTCTGTG 57.852 34.615 12.26 0.00 0.00 3.66
4414 4482 7.770897 AGTGTTAACATTTTTCTCTCTCTGTGT 59.229 33.333 12.26 0.00 0.00 3.72
4415 4483 7.852945 GTGTTAACATTTTTCTCTCTCTGTGTG 59.147 37.037 12.26 0.00 0.00 3.82
4433 4505 2.743928 TGTGTGTGTGTGTGCGCA 60.744 55.556 5.66 5.66 0.00 6.09
4434 4506 2.111582 TGTGTGTGTGTGTGCGCAT 61.112 52.632 15.91 0.00 37.46 4.73
4541 4625 6.125029 AGTTCAGTTATTTGGATGATCCTGG 58.875 40.000 13.44 0.00 37.46 4.45
4546 4630 0.627451 TTTGGATGATCCTGGCAGCT 59.373 50.000 13.44 0.00 37.46 4.24
4564 4648 2.165437 AGCTTTGGTTCGCTTTTGTTCA 59.835 40.909 0.00 0.00 31.17 3.18
4566 4650 3.369451 GCTTTGGTTCGCTTTTGTTCAAA 59.631 39.130 0.00 0.00 0.00 2.69
4595 4679 5.248380 ACTAGGGCTGTTGATCTTCTTTT 57.752 39.130 0.00 0.00 0.00 2.27
4643 4728 1.403780 CCAACTTTCCTACCGGAGTCG 60.404 57.143 9.46 0.00 41.25 4.18
4704 4796 6.770785 TGGGTTGCCTGTTAGCTTATTATAAG 59.229 38.462 7.56 7.56 0.00 1.73
4759 4851 3.258123 CCCTCAAAAATGTTGAACCCGAT 59.742 43.478 0.00 0.00 0.00 4.18
4797 4889 4.828829 AGTTATTGTCTTAACCCTCCACG 58.171 43.478 0.00 0.00 33.43 4.94
4847 4939 5.943416 TGCATACTGGTAGCTGTATTTTGTT 59.057 36.000 18.46 0.00 0.00 2.83
4895 4989 5.984926 TCAGTTTCAATCTTTGTTGAATGCC 59.015 36.000 3.25 0.00 44.80 4.40
4932 5026 7.059156 GGTCTTGTAGGGTAGAGTATCAACTA 58.941 42.308 0.00 0.00 37.82 2.24
4998 5092 2.948979 TGCATTTGATAACGGGATCACC 59.051 45.455 0.00 0.00 35.56 4.02
5021 5116 4.804139 CGCTGAACAGGTATCGTCTTAATT 59.196 41.667 3.99 0.00 0.00 1.40
5026 5121 6.748658 TGAACAGGTATCGTCTTAATTACACG 59.251 38.462 9.07 9.07 34.78 4.49
5035 5130 7.786305 TCGTCTTAATTACACGTTTCTACAG 57.214 36.000 13.30 0.00 35.05 2.74
5054 5149 9.817809 TTCTACAGGATTCATTGTTACATAGAC 57.182 33.333 0.00 0.00 0.00 2.59
5145 5240 2.918600 TCGTGTCATCGACAAAATACCG 59.081 45.455 0.00 0.00 44.49 4.02
5187 5282 2.304180 AGATCAGGTAAGCACAGCAACT 59.696 45.455 0.00 0.00 0.00 3.16
5208 5303 4.835615 ACTCATCCCTCATATACCAGACAC 59.164 45.833 0.00 0.00 0.00 3.67
5248 5343 8.592809 AGATACATAAAACCAAAGAATGCCAAA 58.407 29.630 0.00 0.00 0.00 3.28
5278 5373 2.911484 CAGATTAGGCTGTGGGAGAAC 58.089 52.381 0.00 0.00 0.00 3.01
5326 5421 5.229469 CCTGTCACACGTATACGAAGATTTC 59.771 44.000 30.77 14.21 43.02 2.17
5462 5866 2.790433 TCTGGGTGCCACTTATTTGTC 58.210 47.619 0.00 0.00 0.00 3.18
5615 6019 5.198965 CAAAGATGATCCAAGGGAAGTGAT 58.801 41.667 0.00 0.00 34.34 3.06
5676 6081 1.066573 CGCTCCTTCATGTGAGGAAGT 60.067 52.381 17.32 0.00 40.06 3.01
5696 6101 1.080498 TCCTGAATCCACCTACCCACT 59.920 52.381 0.00 0.00 0.00 4.00
5724 6158 4.327680 AGTCTTTACAAGATCCAACTGCC 58.672 43.478 0.00 0.00 40.18 4.85
5778 6219 0.963225 TCATTTGGACTCGACGGTCA 59.037 50.000 9.10 0.00 37.91 4.02
5785 6226 2.100252 TGGACTCGACGGTCATAAATCC 59.900 50.000 9.10 7.75 37.91 3.01
5841 6285 3.381272 AGTTTGCGCCATGCTAAATGTAT 59.619 39.130 4.18 0.00 46.63 2.29
5848 6292 4.601019 GCCATGCTAAATGTATGTCACAC 58.399 43.478 0.00 0.00 40.86 3.82
5926 6370 2.614057 ACTTCTCCAGTTCAGTTTTGCG 59.386 45.455 0.00 0.00 27.32 4.85
6025 12324 7.738847 AGACAGGATTGACAATTTGGATTTTT 58.261 30.769 1.39 0.00 0.00 1.94
6088 12389 7.364408 GGGAGTTTATGAGTATTCACACTGGTA 60.364 40.741 0.00 0.00 35.83 3.25
6130 12433 3.076621 AGCGCTCAATTTGATGTTCAGA 58.923 40.909 2.64 0.00 0.00 3.27
6282 12618 2.285220 CGAACCAAAGATATCGTGGCAG 59.715 50.000 21.84 12.95 35.72 4.85
6351 12706 0.239082 GGAGGCAAAACCGGTTAACG 59.761 55.000 22.60 13.04 46.52 3.18
6396 12751 7.890127 TCTGAGATGATATTGTTTCCCTTTGTT 59.110 33.333 0.00 0.00 0.00 2.83
6456 12811 5.378292 TTTGCCTATAAATGCGTGTTTGA 57.622 34.783 0.00 0.00 0.00 2.69
6469 12824 5.507077 TGCGTGTTTGAAAATCAGACTTAC 58.493 37.500 3.20 0.00 33.20 2.34
6471 12826 5.277828 GCGTGTTTGAAAATCAGACTTACCT 60.278 40.000 3.20 0.00 33.20 3.08
6473 12828 7.519328 GCGTGTTTGAAAATCAGACTTACCTTA 60.519 37.037 3.20 0.00 33.20 2.69
6474 12829 8.504005 CGTGTTTGAAAATCAGACTTACCTTAT 58.496 33.333 3.20 0.00 33.20 1.73
6475 12830 9.827411 GTGTTTGAAAATCAGACTTACCTTATC 57.173 33.333 3.20 0.00 33.20 1.75
6476 12831 9.793259 TGTTTGAAAATCAGACTTACCTTATCT 57.207 29.630 3.20 0.00 33.20 1.98
6479 12834 8.268850 TGAAAATCAGACTTACCTTATCTTGC 57.731 34.615 0.00 0.00 0.00 4.01
6480 12835 6.910536 AAATCAGACTTACCTTATCTTGCG 57.089 37.500 0.00 0.00 0.00 4.85
6481 12836 4.386867 TCAGACTTACCTTATCTTGCGG 57.613 45.455 0.00 0.00 0.00 5.69
6482 12837 3.767673 TCAGACTTACCTTATCTTGCGGT 59.232 43.478 0.00 0.00 34.86 5.68
6483 12838 4.222145 TCAGACTTACCTTATCTTGCGGTT 59.778 41.667 0.00 0.00 32.36 4.44
6484 12839 4.330074 CAGACTTACCTTATCTTGCGGTTG 59.670 45.833 0.00 0.00 32.36 3.77
6485 12840 3.606687 ACTTACCTTATCTTGCGGTTGG 58.393 45.455 0.00 0.00 32.36 3.77
6486 12841 3.262405 ACTTACCTTATCTTGCGGTTGGA 59.738 43.478 0.00 0.00 32.36 3.53
6487 12842 4.080526 ACTTACCTTATCTTGCGGTTGGAT 60.081 41.667 0.00 0.00 32.36 3.41
6488 12843 2.643551 ACCTTATCTTGCGGTTGGATG 58.356 47.619 0.00 0.00 0.00 3.51
6489 12844 1.949525 CCTTATCTTGCGGTTGGATGG 59.050 52.381 0.00 0.00 0.00 3.51
6490 12845 2.643551 CTTATCTTGCGGTTGGATGGT 58.356 47.619 0.00 0.00 0.00 3.55
6491 12846 2.799126 TATCTTGCGGTTGGATGGTT 57.201 45.000 0.00 0.00 0.00 3.67
6492 12847 2.799126 ATCTTGCGGTTGGATGGTTA 57.201 45.000 0.00 0.00 0.00 2.85
6493 12848 2.107950 TCTTGCGGTTGGATGGTTAG 57.892 50.000 0.00 0.00 0.00 2.34
6494 12849 1.626321 TCTTGCGGTTGGATGGTTAGA 59.374 47.619 0.00 0.00 0.00 2.10
6495 12850 2.009774 CTTGCGGTTGGATGGTTAGAG 58.990 52.381 0.00 0.00 0.00 2.43
6496 12851 0.251916 TGCGGTTGGATGGTTAGAGG 59.748 55.000 0.00 0.00 0.00 3.69
6497 12852 0.463833 GCGGTTGGATGGTTAGAGGG 60.464 60.000 0.00 0.00 0.00 4.30
6498 12853 1.200519 CGGTTGGATGGTTAGAGGGA 58.799 55.000 0.00 0.00 0.00 4.20
6499 12854 1.134491 CGGTTGGATGGTTAGAGGGAC 60.134 57.143 0.00 0.00 0.00 4.46
6500 12855 1.913419 GGTTGGATGGTTAGAGGGACA 59.087 52.381 0.00 0.00 0.00 4.02
6501 12856 2.092914 GGTTGGATGGTTAGAGGGACAG 60.093 54.545 0.00 0.00 0.00 3.51
6502 12857 2.572104 GTTGGATGGTTAGAGGGACAGT 59.428 50.000 0.00 0.00 0.00 3.55
6503 12858 2.187958 TGGATGGTTAGAGGGACAGTG 58.812 52.381 0.00 0.00 0.00 3.66
6504 12859 1.486726 GGATGGTTAGAGGGACAGTGG 59.513 57.143 0.00 0.00 0.00 4.00
6505 12860 2.188817 GATGGTTAGAGGGACAGTGGT 58.811 52.381 0.00 0.00 0.00 4.16
6506 12861 3.371965 GATGGTTAGAGGGACAGTGGTA 58.628 50.000 0.00 0.00 0.00 3.25
6507 12862 3.484953 TGGTTAGAGGGACAGTGGTAT 57.515 47.619 0.00 0.00 0.00 2.73
6508 12863 3.371965 TGGTTAGAGGGACAGTGGTATC 58.628 50.000 0.00 0.00 0.00 2.24
6509 12864 2.699321 GGTTAGAGGGACAGTGGTATCC 59.301 54.545 0.00 0.00 0.00 2.59
6514 12869 1.527370 GGACAGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
6515 12870 1.527370 GACAGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
6516 12871 1.984288 GACAGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
6517 12872 2.000701 CAGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
6518 12873 2.001269 AGTGGTATCCCCAGCCCAC 61.001 63.158 0.00 0.00 46.45 4.61
6519 12874 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
6520 12875 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
6521 12876 2.757124 GGTATCCCCAGCCCACCAG 61.757 68.421 0.00 0.00 0.00 4.00
6522 12877 2.368192 TATCCCCAGCCCACCAGG 60.368 66.667 0.00 0.00 39.47 4.45
6532 12887 4.821935 CCACCAGGGTTCAAGTCC 57.178 61.111 0.00 0.00 0.00 3.85
6533 12888 2.155065 CCACCAGGGTTCAAGTCCT 58.845 57.895 0.00 0.00 0.00 3.85
6537 12892 3.329300 CAGGGTTCAAGTCCTGGTG 57.671 57.895 0.00 0.00 44.99 4.17
6538 12893 0.474184 CAGGGTTCAAGTCCTGGTGT 59.526 55.000 0.00 0.00 44.99 4.16
6539 12894 1.133792 CAGGGTTCAAGTCCTGGTGTT 60.134 52.381 0.00 0.00 44.99 3.32
6540 12895 1.143073 AGGGTTCAAGTCCTGGTGTTC 59.857 52.381 0.00 0.00 31.11 3.18
6541 12896 1.226746 GGTTCAAGTCCTGGTGTTCG 58.773 55.000 0.00 0.00 0.00 3.95
6542 12897 0.586802 GTTCAAGTCCTGGTGTTCGC 59.413 55.000 0.00 0.00 0.00 4.70
6543 12898 0.179234 TTCAAGTCCTGGTGTTCGCA 59.821 50.000 0.00 0.00 0.00 5.10
6544 12899 0.396435 TCAAGTCCTGGTGTTCGCAT 59.604 50.000 0.00 0.00 0.00 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.893919 GAGCCGCCTCCTCTTCTTGT 61.894 60.000 0.00 0.00 31.68 3.16
1 2 1.153469 GAGCCGCCTCCTCTTCTTG 60.153 63.158 0.00 0.00 31.68 3.02
2 3 3.304251 GAGCCGCCTCCTCTTCTT 58.696 61.111 0.00 0.00 31.68 2.52
34 35 4.484872 GACTTACCTGGGCCCCGC 62.485 72.222 22.27 0.00 0.00 6.13
35 36 3.793888 GGACTTACCTGGGCCCCG 61.794 72.222 22.27 14.10 35.41 5.73
36 37 3.417779 GGGACTTACCTGGGCCCC 61.418 72.222 22.27 0.85 38.98 5.80
37 38 3.793888 CGGGACTTACCTGGGCCC 61.794 72.222 17.59 17.59 41.14 5.80
60 61 3.767044 GAGGAGGAGGAGGAGGGCC 62.767 73.684 0.00 0.00 0.00 5.80
61 62 2.123033 GAGGAGGAGGAGGAGGGC 60.123 72.222 0.00 0.00 0.00 5.19
62 63 2.018086 AGGAGGAGGAGGAGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
63 64 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
64 65 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
65 66 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
66 67 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
67 68 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
68 69 0.556380 AAGGAGGAGGAGGAGGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
69 70 0.105709 GAAGGAGGAGGAGGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
70 71 0.467290 CGAAGGAGGAGGAGGAGGAG 60.467 65.000 0.00 0.00 0.00 3.69
71 72 1.615814 CGAAGGAGGAGGAGGAGGA 59.384 63.158 0.00 0.00 0.00 3.71
72 73 4.268720 CGAAGGAGGAGGAGGAGG 57.731 66.667 0.00 0.00 0.00 4.30
82 83 4.734614 GGGTATGCCGTTACCGAAGGAG 62.735 59.091 0.00 0.00 44.35 3.69
83 84 2.906203 GGGTATGCCGTTACCGAAGGA 61.906 57.143 0.00 0.00 44.35 3.36
84 85 0.531311 GGGTATGCCGTTACCGAAGG 60.531 60.000 0.00 0.00 46.42 3.46
85 86 0.176219 TGGGTATGCCGTTACCGAAG 59.824 55.000 0.00 0.00 42.24 3.79
86 87 0.108233 GTGGGTATGCCGTTACCGAA 60.108 55.000 0.00 0.00 42.24 4.30
87 88 1.516892 GTGGGTATGCCGTTACCGA 59.483 57.895 0.00 0.00 42.24 4.69
88 89 1.522130 GGTGGGTATGCCGTTACCG 60.522 63.158 4.31 0.00 42.24 4.02
89 90 1.522130 CGGTGGGTATGCCGTTACC 60.522 63.158 8.77 8.77 42.73 2.85
90 91 4.113681 CGGTGGGTATGCCGTTAC 57.886 61.111 0.00 0.00 42.73 2.50
103 104 4.389576 GAACAAGCTGCGGCGGTG 62.390 66.667 19.17 19.17 44.37 4.94
108 109 2.282462 AAGGGGAACAAGCTGCGG 60.282 61.111 0.00 0.00 0.00 5.69
109 110 2.335712 GGAAGGGGAACAAGCTGCG 61.336 63.158 0.00 0.00 0.00 5.18
110 111 0.962855 GAGGAAGGGGAACAAGCTGC 60.963 60.000 0.00 0.00 0.00 5.25
111 112 0.322906 GGAGGAAGGGGAACAAGCTG 60.323 60.000 0.00 0.00 0.00 4.24
112 113 1.501654 GGGAGGAAGGGGAACAAGCT 61.502 60.000 0.00 0.00 0.00 3.74
113 114 1.000771 GGGAGGAAGGGGAACAAGC 60.001 63.158 0.00 0.00 0.00 4.01
114 115 1.002857 ATGGGAGGAAGGGGAACAAG 58.997 55.000 0.00 0.00 0.00 3.16
115 116 0.704076 CATGGGAGGAAGGGGAACAA 59.296 55.000 0.00 0.00 0.00 2.83
116 117 1.214305 CCATGGGAGGAAGGGGAACA 61.214 60.000 2.85 0.00 0.00 3.18
117 118 1.615262 CCATGGGAGGAAGGGGAAC 59.385 63.158 2.85 0.00 0.00 3.62
118 119 2.316586 GCCATGGGAGGAAGGGGAA 61.317 63.158 15.13 0.00 0.00 3.97
119 120 2.696125 GCCATGGGAGGAAGGGGA 60.696 66.667 15.13 0.00 0.00 4.81
120 121 4.195334 CGCCATGGGAGGAAGGGG 62.195 72.222 15.13 0.00 0.00 4.79
121 122 4.883354 GCGCCATGGGAGGAAGGG 62.883 72.222 15.13 0.00 0.00 3.95
122 123 4.883354 GGCGCCATGGGAGGAAGG 62.883 72.222 24.80 0.00 0.00 3.46
123 124 4.883354 GGGCGCCATGGGAGGAAG 62.883 72.222 30.85 0.00 0.00 3.46
136 137 3.839432 GAAGAGGAGACGGGGGCG 61.839 72.222 0.00 0.00 0.00 6.13
137 138 3.471806 GGAAGAGGAGACGGGGGC 61.472 72.222 0.00 0.00 0.00 5.80
138 139 3.148279 CGGAAGAGGAGACGGGGG 61.148 72.222 0.00 0.00 0.00 5.40
139 140 3.839432 GCGGAAGAGGAGACGGGG 61.839 72.222 0.00 0.00 0.00 5.73
140 141 2.756283 AGCGGAAGAGGAGACGGG 60.756 66.667 0.00 0.00 0.00 5.28
141 142 2.802106 GAGCGGAAGAGGAGACGG 59.198 66.667 0.00 0.00 0.00 4.79
142 143 1.440938 ATCGAGCGGAAGAGGAGACG 61.441 60.000 0.00 0.00 0.00 4.18
143 144 0.030101 CATCGAGCGGAAGAGGAGAC 59.970 60.000 0.00 0.00 0.00 3.36
144 145 0.394488 ACATCGAGCGGAAGAGGAGA 60.394 55.000 0.00 0.00 0.00 3.71
145 146 0.030101 GACATCGAGCGGAAGAGGAG 59.970 60.000 0.00 0.00 0.00 3.69
146 147 1.384989 GGACATCGAGCGGAAGAGGA 61.385 60.000 0.00 0.00 0.00 3.71
147 148 1.066587 GGACATCGAGCGGAAGAGG 59.933 63.158 0.00 0.00 0.00 3.69
148 149 0.030101 GAGGACATCGAGCGGAAGAG 59.970 60.000 0.00 0.00 0.00 2.85
149 150 1.384989 GGAGGACATCGAGCGGAAGA 61.385 60.000 0.00 0.00 0.00 2.87
150 151 1.066587 GGAGGACATCGAGCGGAAG 59.933 63.158 0.00 0.00 0.00 3.46
151 152 1.379977 AGGAGGACATCGAGCGGAA 60.380 57.895 0.00 0.00 0.00 4.30
152 153 1.824329 GAGGAGGACATCGAGCGGA 60.824 63.158 0.00 0.00 0.00 5.54
153 154 2.725008 GAGGAGGACATCGAGCGG 59.275 66.667 0.00 0.00 0.00 5.52
154 155 2.725008 GGAGGAGGACATCGAGCG 59.275 66.667 0.00 0.00 0.00 5.03
155 156 1.118356 ATGGGAGGAGGACATCGAGC 61.118 60.000 0.00 0.00 0.00 5.03
156 157 0.678395 CATGGGAGGAGGACATCGAG 59.322 60.000 0.00 0.00 0.00 4.04
157 158 0.760567 CCATGGGAGGAGGACATCGA 60.761 60.000 2.85 0.00 0.00 3.59
158 159 1.750930 CCATGGGAGGAGGACATCG 59.249 63.158 2.85 0.00 0.00 3.84
159 160 1.453669 GCCATGGGAGGAGGACATC 59.546 63.158 15.13 0.00 0.00 3.06
160 161 2.081161 GGCCATGGGAGGAGGACAT 61.081 63.158 15.13 0.00 0.00 3.06
161 162 2.692368 GGCCATGGGAGGAGGACA 60.692 66.667 15.13 0.00 0.00 4.02
162 163 3.866582 CGGCCATGGGAGGAGGAC 61.867 72.222 15.13 0.00 0.00 3.85
179 180 4.301027 CTAGATCCCGGCCGTGGC 62.301 72.222 26.12 12.59 41.06 5.01
180 181 4.301027 GCTAGATCCCGGCCGTGG 62.301 72.222 26.12 24.01 0.00 4.94
181 182 4.301027 GGCTAGATCCCGGCCGTG 62.301 72.222 26.12 14.27 36.37 4.94
188 189 2.857744 CGGTGGACGGCTAGATCCC 61.858 68.421 0.00 0.00 39.42 3.85
189 190 2.728817 CGGTGGACGGCTAGATCC 59.271 66.667 0.00 0.00 39.42 3.36
190 191 2.027751 GCGGTGGACGGCTAGATC 59.972 66.667 0.00 0.00 44.51 2.75
210 211 3.417167 TACGGGAGGAGGAGGCGAG 62.417 68.421 0.00 0.00 0.00 5.03
211 212 3.414193 TACGGGAGGAGGAGGCGA 61.414 66.667 0.00 0.00 0.00 5.54
212 213 2.907917 CTACGGGAGGAGGAGGCG 60.908 72.222 0.00 0.00 37.07 5.52
213 214 3.228017 GCTACGGGAGGAGGAGGC 61.228 72.222 0.00 0.00 42.67 4.70
214 215 1.529713 GAGCTACGGGAGGAGGAGG 60.530 68.421 0.00 0.00 42.67 4.30
215 216 0.821711 CAGAGCTACGGGAGGAGGAG 60.822 65.000 0.00 0.00 42.67 3.69
216 217 1.227664 CAGAGCTACGGGAGGAGGA 59.772 63.158 0.00 0.00 42.67 3.71
217 218 2.494530 GCAGAGCTACGGGAGGAGG 61.495 68.421 0.00 0.00 42.67 4.30
218 219 1.040339 AAGCAGAGCTACGGGAGGAG 61.040 60.000 0.00 0.00 46.26 3.69
219 220 1.000486 AAGCAGAGCTACGGGAGGA 60.000 57.895 0.00 0.00 38.25 3.71
220 221 1.439644 GAAGCAGAGCTACGGGAGG 59.560 63.158 0.00 0.00 38.25 4.30
221 222 1.064946 CGAAGCAGAGCTACGGGAG 59.935 63.158 0.00 0.00 38.25 4.30
222 223 1.378119 TCGAAGCAGAGCTACGGGA 60.378 57.895 0.00 0.00 38.25 5.14
223 224 1.226717 GTCGAAGCAGAGCTACGGG 60.227 63.158 0.00 0.00 38.25 5.28
224 225 1.583967 CGTCGAAGCAGAGCTACGG 60.584 63.158 5.22 0.00 38.25 4.02
225 226 0.858135 GACGTCGAAGCAGAGCTACG 60.858 60.000 0.00 10.25 41.82 3.51
226 227 0.523757 GGACGTCGAAGCAGAGCTAC 60.524 60.000 9.92 0.00 38.25 3.58
227 228 1.654954 GGGACGTCGAAGCAGAGCTA 61.655 60.000 9.92 0.00 38.25 3.32
228 229 2.569134 GGACGTCGAAGCAGAGCT 59.431 61.111 9.92 0.00 42.56 4.09
229 230 2.493907 AAGGGACGTCGAAGCAGAGC 62.494 60.000 9.92 0.00 0.00 4.09
230 231 0.456995 GAAGGGACGTCGAAGCAGAG 60.457 60.000 9.92 0.00 0.00 3.35
231 232 1.176619 TGAAGGGACGTCGAAGCAGA 61.177 55.000 9.92 0.00 40.45 4.26
232 233 0.108615 ATGAAGGGACGTCGAAGCAG 60.109 55.000 9.92 0.00 40.45 4.24
233 234 0.389817 CATGAAGGGACGTCGAAGCA 60.390 55.000 9.92 5.89 40.45 3.91
234 235 1.696832 GCATGAAGGGACGTCGAAGC 61.697 60.000 9.92 2.93 40.45 3.86
235 236 1.084370 GGCATGAAGGGACGTCGAAG 61.084 60.000 9.92 0.00 40.45 3.79
236 237 1.079405 GGCATGAAGGGACGTCGAA 60.079 57.895 9.92 0.00 40.45 3.71
237 238 2.279810 TGGCATGAAGGGACGTCGA 61.280 57.895 9.92 0.00 40.45 4.20
238 239 2.100631 GTGGCATGAAGGGACGTCG 61.101 63.158 9.92 0.00 40.45 5.12
239 240 1.745489 GGTGGCATGAAGGGACGTC 60.745 63.158 7.13 7.13 37.35 4.34
240 241 2.351276 GGTGGCATGAAGGGACGT 59.649 61.111 0.00 0.00 0.00 4.34
241 242 2.819595 CGGTGGCATGAAGGGACG 60.820 66.667 0.00 0.00 0.00 4.79
242 243 2.438434 CCGGTGGCATGAAGGGAC 60.438 66.667 0.00 0.00 0.00 4.46
243 244 2.609299 TCCGGTGGCATGAAGGGA 60.609 61.111 0.00 0.00 0.00 4.20
244 245 2.438434 GTCCGGTGGCATGAAGGG 60.438 66.667 0.00 0.00 0.00 3.95
245 246 2.438434 GGTCCGGTGGCATGAAGG 60.438 66.667 0.00 0.00 0.00 3.46
246 247 1.450312 GAGGTCCGGTGGCATGAAG 60.450 63.158 0.00 0.00 0.00 3.02
247 248 2.668632 GAGGTCCGGTGGCATGAA 59.331 61.111 0.00 0.00 0.00 2.57
248 249 3.399181 GGAGGTCCGGTGGCATGA 61.399 66.667 0.00 0.00 0.00 3.07
249 250 3.391665 GAGGAGGTCCGGTGGCATG 62.392 68.421 0.00 0.00 42.08 4.06
250 251 3.083997 GAGGAGGTCCGGTGGCAT 61.084 66.667 0.00 0.00 42.08 4.40
259 260 0.106217 CAGAGGAGGAGGAGGAGGTC 60.106 65.000 0.00 0.00 0.00 3.85
260 261 2.015081 CAGAGGAGGAGGAGGAGGT 58.985 63.158 0.00 0.00 0.00 3.85
261 262 1.457455 GCAGAGGAGGAGGAGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
262 263 1.457455 GGCAGAGGAGGAGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
263 264 2.693017 GGCAGAGGAGGAGGAGGA 59.307 66.667 0.00 0.00 0.00 3.71
264 265 2.837291 CGGCAGAGGAGGAGGAGG 60.837 72.222 0.00 0.00 0.00 4.30
265 266 3.535962 GCGGCAGAGGAGGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
271 272 4.394712 AAACCGGCGGCAGAGGAG 62.395 66.667 28.71 0.00 0.00 3.69
272 273 4.388499 GAAACCGGCGGCAGAGGA 62.388 66.667 28.71 0.00 0.00 3.71
285 286 1.646189 GAGCAGACGAGATGGGAAAC 58.354 55.000 0.00 0.00 0.00 2.78
286 287 0.537188 GGAGCAGACGAGATGGGAAA 59.463 55.000 0.00 0.00 0.00 3.13
287 288 0.324738 AGGAGCAGACGAGATGGGAA 60.325 55.000 0.00 0.00 0.00 3.97
288 289 0.324738 AAGGAGCAGACGAGATGGGA 60.325 55.000 0.00 0.00 0.00 4.37
289 290 0.103937 GAAGGAGCAGACGAGATGGG 59.896 60.000 0.00 0.00 0.00 4.00
290 291 0.103937 GGAAGGAGCAGACGAGATGG 59.896 60.000 0.00 0.00 0.00 3.51
291 292 0.820226 TGGAAGGAGCAGACGAGATG 59.180 55.000 0.00 0.00 0.00 2.90
292 293 0.820871 GTGGAAGGAGCAGACGAGAT 59.179 55.000 0.00 0.00 0.00 2.75
293 294 0.539669 TGTGGAAGGAGCAGACGAGA 60.540 55.000 0.00 0.00 0.00 4.04
294 295 0.534412 ATGTGGAAGGAGCAGACGAG 59.466 55.000 0.00 0.00 0.00 4.18
295 296 0.247460 CATGTGGAAGGAGCAGACGA 59.753 55.000 0.00 0.00 0.00 4.20
296 297 1.364626 GCATGTGGAAGGAGCAGACG 61.365 60.000 0.00 0.00 0.00 4.18
297 298 1.364626 CGCATGTGGAAGGAGCAGAC 61.365 60.000 0.00 0.00 0.00 3.51
298 299 1.078918 CGCATGTGGAAGGAGCAGA 60.079 57.895 0.00 0.00 0.00 4.26
299 300 2.758089 GCGCATGTGGAAGGAGCAG 61.758 63.158 8.62 0.00 0.00 4.24
300 301 2.747460 GCGCATGTGGAAGGAGCA 60.747 61.111 8.62 0.00 0.00 4.26
301 302 1.986575 GAAGCGCATGTGGAAGGAGC 61.987 60.000 11.47 0.00 0.00 4.70
302 303 0.392193 AGAAGCGCATGTGGAAGGAG 60.392 55.000 11.47 0.00 0.00 3.69
303 304 0.674581 CAGAAGCGCATGTGGAAGGA 60.675 55.000 11.47 0.00 0.00 3.36
304 305 1.798735 CAGAAGCGCATGTGGAAGG 59.201 57.895 11.47 0.00 0.00 3.46
305 306 1.136147 GCAGAAGCGCATGTGGAAG 59.864 57.895 11.47 0.00 0.00 3.46
306 307 3.266964 GCAGAAGCGCATGTGGAA 58.733 55.556 11.47 0.00 0.00 3.53
320 321 0.690411 AGGAGGGGATCTGACAGCAG 60.690 60.000 0.00 0.00 43.67 4.24
321 322 0.252881 AAGGAGGGGATCTGACAGCA 60.253 55.000 0.00 0.00 0.00 4.41
322 323 0.467804 GAAGGAGGGGATCTGACAGC 59.532 60.000 0.00 0.00 0.00 4.40
323 324 2.173126 AGAAGGAGGGGATCTGACAG 57.827 55.000 0.00 0.00 0.00 3.51
324 325 2.472029 GAAGAAGGAGGGGATCTGACA 58.528 52.381 0.00 0.00 0.00 3.58
325 326 1.765904 GGAAGAAGGAGGGGATCTGAC 59.234 57.143 0.00 0.00 0.00 3.51
326 327 1.344496 GGGAAGAAGGAGGGGATCTGA 60.344 57.143 0.00 0.00 0.00 3.27
327 328 1.135960 GGGAAGAAGGAGGGGATCTG 58.864 60.000 0.00 0.00 0.00 2.90
328 329 0.725133 TGGGAAGAAGGAGGGGATCT 59.275 55.000 0.00 0.00 0.00 2.75
329 330 1.492599 CTTGGGAAGAAGGAGGGGATC 59.507 57.143 0.00 0.00 0.00 3.36
330 331 1.601248 CTTGGGAAGAAGGAGGGGAT 58.399 55.000 0.00 0.00 0.00 3.85
331 332 1.208165 GCTTGGGAAGAAGGAGGGGA 61.208 60.000 0.00 0.00 0.00 4.81
332 333 1.210885 AGCTTGGGAAGAAGGAGGGG 61.211 60.000 0.00 0.00 0.00 4.79
333 334 0.701147 AAGCTTGGGAAGAAGGAGGG 59.299 55.000 0.00 0.00 0.00 4.30
334 335 2.040947 AGAAAGCTTGGGAAGAAGGAGG 59.959 50.000 0.00 0.00 0.00 4.30
335 336 3.431673 AGAAAGCTTGGGAAGAAGGAG 57.568 47.619 0.00 0.00 0.00 3.69
336 337 3.490348 CAAGAAAGCTTGGGAAGAAGGA 58.510 45.455 0.00 0.00 46.13 3.36
337 338 3.930634 CAAGAAAGCTTGGGAAGAAGG 57.069 47.619 0.00 0.00 46.13 3.46
348 349 5.775195 AGGGTAACATTAAAGCAAGAAAGCT 59.225 36.000 0.00 0.00 43.76 3.74
349 350 5.863935 CAGGGTAACATTAAAGCAAGAAAGC 59.136 40.000 0.00 0.00 39.74 3.51
350 351 7.214467 TCAGGGTAACATTAAAGCAAGAAAG 57.786 36.000 0.00 0.00 39.74 2.62
351 352 7.775053 ATCAGGGTAACATTAAAGCAAGAAA 57.225 32.000 0.00 0.00 39.74 2.52
352 353 8.902806 CATATCAGGGTAACATTAAAGCAAGAA 58.097 33.333 0.00 0.00 39.74 2.52
353 354 8.271458 TCATATCAGGGTAACATTAAAGCAAGA 58.729 33.333 0.00 0.00 39.74 3.02
354 355 8.450578 TCATATCAGGGTAACATTAAAGCAAG 57.549 34.615 0.00 0.00 39.74 4.01
355 356 8.682710 GTTCATATCAGGGTAACATTAAAGCAA 58.317 33.333 0.00 0.00 39.74 3.91
356 357 7.831690 TGTTCATATCAGGGTAACATTAAAGCA 59.168 33.333 0.00 0.00 39.74 3.91
357 358 8.220755 TGTTCATATCAGGGTAACATTAAAGC 57.779 34.615 0.00 0.00 39.74 3.51
360 361 9.693739 ACAATGTTCATATCAGGGTAACATTAA 57.306 29.630 10.40 0.00 44.62 1.40
361 362 9.693739 AACAATGTTCATATCAGGGTAACATTA 57.306 29.630 10.40 0.00 44.62 1.90
362 363 8.593945 AACAATGTTCATATCAGGGTAACATT 57.406 30.769 0.00 0.00 46.33 2.71
363 364 7.285401 GGAACAATGTTCATATCAGGGTAACAT 59.715 37.037 25.14 0.00 41.29 2.71
364 365 6.601613 GGAACAATGTTCATATCAGGGTAACA 59.398 38.462 25.14 0.00 39.74 2.41
365 366 6.601613 TGGAACAATGTTCATATCAGGGTAAC 59.398 38.462 25.14 5.96 31.92 2.50
366 367 6.726379 TGGAACAATGTTCATATCAGGGTAA 58.274 36.000 25.14 0.00 31.92 2.85
367 368 6.320434 TGGAACAATGTTCATATCAGGGTA 57.680 37.500 25.14 0.00 31.92 3.69
368 369 5.191727 TGGAACAATGTTCATATCAGGGT 57.808 39.130 25.14 0.00 31.92 4.34
369 370 4.037208 GCTGGAACAATGTTCATATCAGGG 59.963 45.833 25.14 6.70 38.70 4.45
370 371 4.037208 GGCTGGAACAATGTTCATATCAGG 59.963 45.833 25.14 10.30 38.70 3.86
371 372 4.885907 AGGCTGGAACAATGTTCATATCAG 59.114 41.667 25.14 21.68 38.70 2.90
372 373 4.858850 AGGCTGGAACAATGTTCATATCA 58.141 39.130 25.14 13.84 38.70 2.15
373 374 5.221126 GGAAGGCTGGAACAATGTTCATATC 60.221 44.000 25.14 14.05 38.70 1.63
374 375 4.646492 GGAAGGCTGGAACAATGTTCATAT 59.354 41.667 25.14 7.04 38.70 1.78
375 376 4.016444 GGAAGGCTGGAACAATGTTCATA 58.984 43.478 25.14 13.71 38.70 2.15
376 377 2.827921 GGAAGGCTGGAACAATGTTCAT 59.172 45.455 25.14 6.07 38.70 2.57
377 378 2.238521 GGAAGGCTGGAACAATGTTCA 58.761 47.619 25.14 11.97 38.70 3.18
378 379 2.238521 TGGAAGGCTGGAACAATGTTC 58.761 47.619 17.16 17.16 38.70 3.18
379 380 2.380064 TGGAAGGCTGGAACAATGTT 57.620 45.000 0.00 0.00 38.70 2.71
380 381 2.042162 AGATGGAAGGCTGGAACAATGT 59.958 45.455 0.00 0.00 38.70 2.71
381 382 2.731572 AGATGGAAGGCTGGAACAATG 58.268 47.619 0.00 0.00 38.70 2.82
382 383 3.011032 AGAAGATGGAAGGCTGGAACAAT 59.989 43.478 0.00 0.00 38.70 2.71
383 384 2.376518 AGAAGATGGAAGGCTGGAACAA 59.623 45.455 0.00 0.00 38.70 2.83
384 385 1.988107 AGAAGATGGAAGGCTGGAACA 59.012 47.619 0.00 0.00 0.00 3.18
385 386 2.238395 AGAGAAGATGGAAGGCTGGAAC 59.762 50.000 0.00 0.00 0.00 3.62
386 387 2.555664 AGAGAAGATGGAAGGCTGGAA 58.444 47.619 0.00 0.00 0.00 3.53
387 388 2.238144 CAAGAGAAGATGGAAGGCTGGA 59.762 50.000 0.00 0.00 0.00 3.86
388 389 2.238144 TCAAGAGAAGATGGAAGGCTGG 59.762 50.000 0.00 0.00 0.00 4.85
389 390 3.623906 TCAAGAGAAGATGGAAGGCTG 57.376 47.619 0.00 0.00 0.00 4.85
390 391 4.018597 ACAATCAAGAGAAGATGGAAGGCT 60.019 41.667 0.00 0.00 0.00 4.58
391 392 4.268359 ACAATCAAGAGAAGATGGAAGGC 58.732 43.478 0.00 0.00 0.00 4.35
392 393 5.743117 AGACAATCAAGAGAAGATGGAAGG 58.257 41.667 0.00 0.00 0.00 3.46
393 394 9.474920 GTATAGACAATCAAGAGAAGATGGAAG 57.525 37.037 0.00 0.00 0.00 3.46
394 395 8.981659 TGTATAGACAATCAAGAGAAGATGGAA 58.018 33.333 0.00 0.00 30.68 3.53
395 396 8.539117 TGTATAGACAATCAAGAGAAGATGGA 57.461 34.615 0.00 0.00 30.68 3.41
396 397 8.637099 TCTGTATAGACAATCAAGAGAAGATGG 58.363 37.037 0.00 0.00 34.35 3.51
397 398 9.681692 CTCTGTATAGACAATCAAGAGAAGATG 57.318 37.037 0.00 0.00 34.35 2.90
398 399 8.859090 CCTCTGTATAGACAATCAAGAGAAGAT 58.141 37.037 5.53 0.00 34.35 2.40
399 400 7.201866 GCCTCTGTATAGACAATCAAGAGAAGA 60.202 40.741 5.53 0.00 34.35 2.87
400 401 6.922957 GCCTCTGTATAGACAATCAAGAGAAG 59.077 42.308 5.53 0.00 34.35 2.85
401 402 6.183360 GGCCTCTGTATAGACAATCAAGAGAA 60.183 42.308 0.00 0.00 34.35 2.87
402 403 5.303078 GGCCTCTGTATAGACAATCAAGAGA 59.697 44.000 0.00 0.00 34.35 3.10
403 404 5.304101 AGGCCTCTGTATAGACAATCAAGAG 59.696 44.000 0.00 0.00 34.35 2.85
404 405 5.211973 AGGCCTCTGTATAGACAATCAAGA 58.788 41.667 0.00 0.00 34.35 3.02
405 406 5.510520 GGAGGCCTCTGTATAGACAATCAAG 60.511 48.000 31.36 0.00 34.35 3.02
406 407 4.345257 GGAGGCCTCTGTATAGACAATCAA 59.655 45.833 31.36 0.00 34.35 2.57
407 408 3.898123 GGAGGCCTCTGTATAGACAATCA 59.102 47.826 31.36 0.00 34.35 2.57
408 409 3.898123 TGGAGGCCTCTGTATAGACAATC 59.102 47.826 31.36 10.99 34.35 2.67
409 410 3.928754 TGGAGGCCTCTGTATAGACAAT 58.071 45.455 31.36 0.00 34.35 2.71
410 411 3.398318 TGGAGGCCTCTGTATAGACAA 57.602 47.619 31.36 0.00 34.35 3.18
411 412 3.398318 TTGGAGGCCTCTGTATAGACA 57.602 47.619 31.36 15.70 0.00 3.41
412 413 4.833380 TGTATTGGAGGCCTCTGTATAGAC 59.167 45.833 31.36 19.15 0.00 2.59
413 414 5.074746 TGTATTGGAGGCCTCTGTATAGA 57.925 43.478 31.36 19.86 0.00 1.98
414 415 5.047660 GTCTGTATTGGAGGCCTCTGTATAG 60.048 48.000 31.36 24.27 0.00 1.31
415 416 4.833380 GTCTGTATTGGAGGCCTCTGTATA 59.167 45.833 31.36 21.26 0.00 1.47
416 417 3.643792 GTCTGTATTGGAGGCCTCTGTAT 59.356 47.826 31.36 22.20 0.00 2.29
417 418 3.031736 GTCTGTATTGGAGGCCTCTGTA 58.968 50.000 31.36 18.25 0.00 2.74
418 419 1.834263 GTCTGTATTGGAGGCCTCTGT 59.166 52.381 31.36 19.23 0.00 3.41
419 420 1.833630 TGTCTGTATTGGAGGCCTCTG 59.166 52.381 31.36 9.90 0.00 3.35
420 421 2.254152 TGTCTGTATTGGAGGCCTCT 57.746 50.000 31.36 15.33 0.00 3.69
421 422 2.224402 GGATGTCTGTATTGGAGGCCTC 60.224 54.545 25.59 25.59 0.00 4.70
422 423 1.771255 GGATGTCTGTATTGGAGGCCT 59.229 52.381 3.86 3.86 0.00 5.19
423 424 1.490490 TGGATGTCTGTATTGGAGGCC 59.510 52.381 0.00 0.00 0.00 5.19
424 425 3.281727 TTGGATGTCTGTATTGGAGGC 57.718 47.619 0.00 0.00 0.00 4.70
425 426 3.623060 CGTTTGGATGTCTGTATTGGAGG 59.377 47.826 0.00 0.00 0.00 4.30
426 427 3.063997 GCGTTTGGATGTCTGTATTGGAG 59.936 47.826 0.00 0.00 0.00 3.86
427 428 3.006940 GCGTTTGGATGTCTGTATTGGA 58.993 45.455 0.00 0.00 0.00 3.53
428 429 2.746904 TGCGTTTGGATGTCTGTATTGG 59.253 45.455 0.00 0.00 0.00 3.16
429 430 3.728864 GCTGCGTTTGGATGTCTGTATTG 60.729 47.826 0.00 0.00 0.00 1.90
430 431 2.420022 GCTGCGTTTGGATGTCTGTATT 59.580 45.455 0.00 0.00 0.00 1.89
431 432 2.009774 GCTGCGTTTGGATGTCTGTAT 58.990 47.619 0.00 0.00 0.00 2.29
432 433 1.270571 TGCTGCGTTTGGATGTCTGTA 60.271 47.619 0.00 0.00 0.00 2.74
433 434 0.534877 TGCTGCGTTTGGATGTCTGT 60.535 50.000 0.00 0.00 0.00 3.41
434 435 0.167470 CTGCTGCGTTTGGATGTCTG 59.833 55.000 0.00 0.00 0.00 3.51
435 436 1.580845 GCTGCTGCGTTTGGATGTCT 61.581 55.000 0.00 0.00 0.00 3.41
436 437 1.154150 GCTGCTGCGTTTGGATGTC 60.154 57.895 0.00 0.00 0.00 3.06
437 438 2.956987 GCTGCTGCGTTTGGATGT 59.043 55.556 0.00 0.00 0.00 3.06
447 448 1.530646 GCAAATCTCTAACGCTGCTGC 60.531 52.381 5.34 5.34 0.00 5.25
448 449 2.005451 AGCAAATCTCTAACGCTGCTG 58.995 47.619 0.00 0.00 38.64 4.41
449 450 2.275318 GAGCAAATCTCTAACGCTGCT 58.725 47.619 0.00 0.00 42.57 4.24
450 451 2.728368 GAGCAAATCTCTAACGCTGC 57.272 50.000 0.00 0.00 38.78 5.25
459 460 5.523188 CAGGTCATCAAGTAGAGCAAATCTC 59.477 44.000 0.00 0.00 39.64 2.75
467 468 3.181482 ACGCATCAGGTCATCAAGTAGAG 60.181 47.826 0.00 0.00 0.00 2.43
469 470 3.170791 ACGCATCAGGTCATCAAGTAG 57.829 47.619 0.00 0.00 0.00 2.57
470 471 3.610040 AACGCATCAGGTCATCAAGTA 57.390 42.857 0.00 0.00 0.00 2.24
495 496 9.765795 ATAAAATGTTGTTCGGGTAATTGAAAA 57.234 25.926 0.00 0.00 0.00 2.29
496 497 9.765795 AATAAAATGTTGTTCGGGTAATTGAAA 57.234 25.926 0.00 0.00 0.00 2.69
497 498 9.765795 AAATAAAATGTTGTTCGGGTAATTGAA 57.234 25.926 0.00 0.00 0.00 2.69
526 527 5.392595 GCGGATGCTGTTTTCCTTGTAATAA 60.393 40.000 0.00 0.00 38.39 1.40
527 528 4.095782 GCGGATGCTGTTTTCCTTGTAATA 59.904 41.667 0.00 0.00 38.39 0.98
528 529 3.119495 GCGGATGCTGTTTTCCTTGTAAT 60.119 43.478 0.00 0.00 38.39 1.89
529 530 2.227865 GCGGATGCTGTTTTCCTTGTAA 59.772 45.455 0.00 0.00 38.39 2.41
530 531 1.810151 GCGGATGCTGTTTTCCTTGTA 59.190 47.619 0.00 0.00 38.39 2.41
531 532 0.598065 GCGGATGCTGTTTTCCTTGT 59.402 50.000 0.00 0.00 38.39 3.16
532 533 3.406682 GCGGATGCTGTTTTCCTTG 57.593 52.632 0.00 0.00 38.39 3.61
552 553 2.829720 ACTAACAAGACCAGCCGATACA 59.170 45.455 0.00 0.00 0.00 2.29
555 556 2.167900 GGTACTAACAAGACCAGCCGAT 59.832 50.000 0.00 0.00 33.16 4.18
560 561 5.733620 TTACAGGGTACTAACAAGACCAG 57.266 43.478 0.00 0.00 34.73 4.00
567 568 8.818860 ACACAGATATTTTACAGGGTACTAACA 58.181 33.333 0.00 0.00 0.00 2.41
574 575 6.655003 CAGTTCACACAGATATTTTACAGGGT 59.345 38.462 0.00 0.00 0.00 4.34
589 590 1.002576 CGCTTGCAATCAGTTCACACA 60.003 47.619 0.00 0.00 0.00 3.72
616 617 2.026822 CCCCGCTTAGCATCCAGATTAT 60.027 50.000 4.70 0.00 0.00 1.28
620 621 3.106986 GCCCCGCTTAGCATCCAGA 62.107 63.158 4.70 0.00 0.00 3.86
635 636 2.275748 GGCTGAACCCTAAGGCCC 59.724 66.667 0.00 0.00 37.12 5.80
657 658 4.726416 CTGAACAAGATTGAATGGAACCG 58.274 43.478 0.00 0.00 0.00 4.44
663 664 4.946157 AGTAGGGCTGAACAAGATTGAATG 59.054 41.667 0.00 0.00 0.00 2.67
714 715 0.688087 AGCTAGACCTGGGGTACAGC 60.688 60.000 11.67 11.67 46.14 4.40
739 740 9.003658 ACCAGATCACAACTAATTTTGTCTAAG 57.996 33.333 0.00 0.00 37.62 2.18
749 750 5.497474 GGTACCAACCAGATCACAACTAAT 58.503 41.667 7.15 0.00 45.98 1.73
764 765 4.874396 GCCTAACTTGACATAGGTACCAAC 59.126 45.833 15.94 0.94 40.71 3.77
765 766 4.532916 TGCCTAACTTGACATAGGTACCAA 59.467 41.667 15.94 0.00 40.71 3.67
786 787 5.924825 CGGTAGGATTGGTTACTAAGTATGC 59.075 44.000 0.00 0.00 0.00 3.14
787 788 5.924825 GCGGTAGGATTGGTTACTAAGTATG 59.075 44.000 0.00 0.00 0.00 2.39
788 789 5.837438 AGCGGTAGGATTGGTTACTAAGTAT 59.163 40.000 0.00 0.00 0.00 2.12
789 790 5.068198 CAGCGGTAGGATTGGTTACTAAGTA 59.932 44.000 0.00 0.00 0.00 2.24
790 791 4.028825 AGCGGTAGGATTGGTTACTAAGT 58.971 43.478 0.00 0.00 0.00 2.24
791 792 4.098960 TCAGCGGTAGGATTGGTTACTAAG 59.901 45.833 0.00 0.00 0.00 2.18
792 793 4.025360 TCAGCGGTAGGATTGGTTACTAA 58.975 43.478 0.00 0.00 0.00 2.24
793 794 3.634504 TCAGCGGTAGGATTGGTTACTA 58.365 45.455 0.00 0.00 0.00 1.82
794 795 2.463752 TCAGCGGTAGGATTGGTTACT 58.536 47.619 0.00 0.00 0.00 2.24
795 796 2.973694 TCAGCGGTAGGATTGGTTAC 57.026 50.000 0.00 0.00 0.00 2.50
796 797 3.452990 TCATTCAGCGGTAGGATTGGTTA 59.547 43.478 0.00 0.00 0.00 2.85
809 810 1.879380 TCCCAACAGTTTCATTCAGCG 59.121 47.619 0.00 0.00 0.00 5.18
848 849 5.105228 ACAAATCATCCAATGCCTAACTTGG 60.105 40.000 0.00 0.00 42.72 3.61
864 865 6.163476 TCTGACTAAACTGCGTACAAATCAT 58.837 36.000 0.00 0.00 0.00 2.45
874 876 4.452455 ACTGGAAATTCTGACTAAACTGCG 59.548 41.667 0.00 0.00 0.00 5.18
958 981 1.303806 GCAGGCGGGGTAGGAAAAA 60.304 57.895 0.00 0.00 0.00 1.94
963 986 3.541713 GAGAGCAGGCGGGGTAGG 61.542 72.222 0.00 0.00 0.00 3.18
969 992 2.811101 CCTACAGAGAGCAGGCGG 59.189 66.667 0.00 0.00 0.00 6.13
1068 1091 1.269309 GCGGAATCGTAGAGCATGTCT 60.269 52.381 0.00 0.00 43.63 3.41
1326 1349 3.181434 ACAAATACCCTGAGTTGGAGCAA 60.181 43.478 0.00 0.00 0.00 3.91
1334 1357 4.322499 CGTACTTCCACAAATACCCTGAGT 60.322 45.833 0.00 0.00 0.00 3.41
1343 1366 3.181458 ACCTGTCACGTACTTCCACAAAT 60.181 43.478 0.00 0.00 0.00 2.32
1418 1441 7.377766 TCCAGGAATGTTAAAAAGATCTTCG 57.622 36.000 8.78 0.00 0.00 3.79
1424 1447 7.280876 CGATCAGATCCAGGAATGTTAAAAAGA 59.719 37.037 4.73 0.00 0.00 2.52
1434 1457 3.509575 GCTAGTCGATCAGATCCAGGAAT 59.490 47.826 4.73 0.00 0.00 3.01
1450 1473 6.268566 CCAATTATTTGGCTCTTTGCTAGTC 58.731 40.000 3.53 0.00 45.71 2.59
1528 1551 1.597742 ATAACAGATGGCATCGCACC 58.402 50.000 21.01 0.00 0.00 5.01
1530 1553 4.541973 AGATATAACAGATGGCATCGCA 57.458 40.909 21.01 8.56 0.00 5.10
1559 1582 3.750130 ACCATAGATCAAATCGCTCATGC 59.250 43.478 0.00 0.00 0.00 4.06
1643 1666 3.065371 GTCATCAAAATAACGGAGCCAGG 59.935 47.826 0.00 0.00 0.00 4.45
1659 1682 9.131791 TGCTACACTTATACAGAATAGTCATCA 57.868 33.333 0.00 0.00 0.00 3.07
1660 1683 9.967346 TTGCTACACTTATACAGAATAGTCATC 57.033 33.333 0.00 0.00 0.00 2.92
1669 1692 9.982651 GAATTCCTATTGCTACACTTATACAGA 57.017 33.333 0.00 0.00 0.00 3.41
1792 1815 7.491372 AGCTAGAAATTGCATGATTCATTTGTG 59.509 33.333 0.00 0.00 0.00 3.33
1993 2016 7.636259 AAAACATGTTGAAACCATCATAACG 57.364 32.000 12.82 0.00 38.03 3.18
2315 2339 3.004734 ACCCGATGAGCAAACAAAGAAAG 59.995 43.478 0.00 0.00 0.00 2.62
2319 2343 1.879380 TGACCCGATGAGCAAACAAAG 59.121 47.619 0.00 0.00 0.00 2.77
2333 2357 1.518325 TGTGCAAACAGTATGACCCG 58.482 50.000 0.00 0.00 39.69 5.28
2555 2579 5.749109 GTCATTACTCACTAGTTTATGCGCT 59.251 40.000 9.73 0.00 37.15 5.92
2559 2583 7.041721 TGGCTGTCATTACTCACTAGTTTATG 58.958 38.462 0.00 0.00 37.15 1.90
2605 2629 6.976636 AGAGAAAGAGCTAACTTTACATGC 57.023 37.500 0.66 0.00 39.71 4.06
2890 2914 9.077674 GTTGAAAAGGAAGAAGAAAGAGAAAAC 57.922 33.333 0.00 0.00 0.00 2.43
3030 3054 3.944650 TGTTCAACTGAGCTAAAGCACAA 59.055 39.130 4.54 0.00 45.16 3.33
3038 3062 7.877612 TGTCAGATAATTTGTTCAACTGAGCTA 59.122 33.333 0.00 0.00 34.40 3.32
3045 3069 9.346725 GGAAATCTGTCAGATAATTTGTTCAAC 57.653 33.333 15.77 0.82 32.89 3.18
3062 3086 4.039245 TGAGAACTGAAGACGGAAATCTGT 59.961 41.667 0.00 0.00 38.36 3.41
3073 3097 3.504134 CGGAGAAGAGTGAGAACTGAAGA 59.496 47.826 0.00 0.00 0.00 2.87
3183 3207 9.071221 TCATGTCAAATCAAAACGCATATAAAC 57.929 29.630 0.00 0.00 0.00 2.01
3188 3212 6.252967 ACTCATGTCAAATCAAAACGCATA 57.747 33.333 0.00 0.00 0.00 3.14
3235 3259 4.277423 CCCCGCGTTCCTATTCAATAAAAT 59.723 41.667 4.92 0.00 0.00 1.82
3240 3264 0.544697 ACCCCGCGTTCCTATTCAAT 59.455 50.000 4.92 0.00 0.00 2.57
3263 3288 4.408921 AGAAATGATATCAAGTCCGTGGGA 59.591 41.667 9.99 0.00 0.00 4.37
3287 3312 6.801539 TGTGTATGAAAACTAAGCTCCAAG 57.198 37.500 0.00 0.00 0.00 3.61
3347 3372 9.567776 TTTCACTTCTGAATGGTTCTTAACATA 57.432 29.630 0.00 0.00 36.26 2.29
3357 3382 5.277828 GCGTAACTTTTCACTTCTGAATGGT 60.278 40.000 0.00 0.00 36.26 3.55
3380 3405 2.798976 TCATTGCAGACAAAGGTTGC 57.201 45.000 0.00 0.00 39.77 4.17
3419 3444 3.414549 TTGAAAGAAAACTGTGCCGTC 57.585 42.857 0.00 0.00 0.00 4.79
3421 3446 7.305474 ACTATTATTGAAAGAAAACTGTGCCG 58.695 34.615 0.00 0.00 0.00 5.69
3458 3483 4.380550 CGTCTGTACACCTCTTGCTCATAA 60.381 45.833 0.00 0.00 0.00 1.90
3612 3640 1.698506 AAAACGTTGATGGCCCTCAA 58.301 45.000 18.40 18.40 32.84 3.02
3633 3661 5.245531 TCCTTAAGCAATATAATCTGGCGG 58.754 41.667 0.00 0.00 0.00 6.13
3742 3803 4.506288 ACTTGCGGTCAATTTTTAAGTTGC 59.494 37.500 0.00 0.00 0.00 4.17
3750 3811 7.433680 AGATAAGAAAACTTGCGGTCAATTTT 58.566 30.769 0.00 0.00 36.87 1.82
4017 4078 7.406916 TGGGATGTTATTAAACCTCTTTGCTA 58.593 34.615 0.00 0.00 34.49 3.49
4057 4118 5.690464 AGATCTGGAGAGCATAAAACTGT 57.310 39.130 0.00 0.00 31.88 3.55
4082 4143 4.349930 AGGTGACAAGTTGGTGGTAGTTAT 59.650 41.667 7.96 0.00 0.00 1.89
4084 4145 2.508300 AGGTGACAAGTTGGTGGTAGTT 59.492 45.455 7.96 0.00 0.00 2.24
4086 4147 2.930826 AGGTGACAAGTTGGTGGTAG 57.069 50.000 7.96 0.00 0.00 3.18
4087 4148 3.712733 ACTTAGGTGACAAGTTGGTGGTA 59.287 43.478 7.96 0.00 32.28 3.25
4112 4176 6.588756 GTGGAACAGTTCATCTTCATTACGTA 59.411 38.462 15.36 0.00 41.80 3.57
4115 4179 5.940470 AGGTGGAACAGTTCATCTTCATTAC 59.060 40.000 15.36 0.00 41.80 1.89
4131 4195 6.152323 TCACAGTATCAACTAGTAGGTGGAAC 59.848 42.308 15.25 12.78 32.64 3.62
4142 4208 7.200455 CCACGACAATATCACAGTATCAACTA 58.800 38.462 0.00 0.00 33.48 2.24
4163 4229 0.608035 AACCACAATACCCTGCCACG 60.608 55.000 0.00 0.00 0.00 4.94
4268 4334 5.896678 AGCTAGGTTAAGTCACTCATCTGAT 59.103 40.000 0.00 0.00 0.00 2.90
4282 4348 1.749634 GCCAGAGACGAGCTAGGTTAA 59.250 52.381 0.00 0.00 0.00 2.01
4367 4435 0.806868 CTGCACACCGAGCATTTCAT 59.193 50.000 0.00 0.00 41.82 2.57
4377 4445 1.937223 TGTTAACACTTCTGCACACCG 59.063 47.619 3.59 0.00 0.00 4.94
4393 4461 7.011389 CACACACACAGAGAGAGAAAAATGTTA 59.989 37.037 0.00 0.00 0.00 2.41
4395 4463 5.295292 CACACACACAGAGAGAGAAAAATGT 59.705 40.000 0.00 0.00 0.00 2.71
4396 4464 5.295292 ACACACACACAGAGAGAGAAAAATG 59.705 40.000 0.00 0.00 0.00 2.32
4397 4465 5.295292 CACACACACACAGAGAGAGAAAAAT 59.705 40.000 0.00 0.00 0.00 1.82
4408 4476 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
4409 4477 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
4410 4478 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4411 4479 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
4412 4480 1.872468 GCACACACACACACACACA 59.128 52.632 0.00 0.00 0.00 3.72
4413 4481 1.225991 CGCACACACACACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
4414 4482 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
4415 4483 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
4433 4505 2.185004 AGAACCGCTAAAGTGTGCAT 57.815 45.000 0.00 0.00 0.00 3.96
4434 4506 2.823924 TAGAACCGCTAAAGTGTGCA 57.176 45.000 0.00 0.00 0.00 4.57
4437 4509 4.159879 AGCAGTATAGAACCGCTAAAGTGT 59.840 41.667 0.00 0.00 40.14 3.55
4541 4625 0.854705 CAAAAGCGAACCAAAGCTGC 59.145 50.000 0.00 0.00 43.78 5.25
4595 4679 6.179756 TGCTTAGTTATTCAAGGCATCTCAA 58.820 36.000 0.00 0.00 0.00 3.02
4704 4796 2.036733 TGGACGCCCATACATAGTTAGC 59.963 50.000 0.00 0.00 37.58 3.09
4759 4851 9.944376 AGACAATAACTAGATTTACAAGCAGAA 57.056 29.630 0.00 0.00 0.00 3.02
4797 4889 4.201812 TGCCAACAATCTTTTCGATCGATC 60.202 41.667 20.18 15.68 0.00 3.69
4847 4939 3.798515 ACACAAGGGGTATGAAGGACTA 58.201 45.455 0.00 0.00 0.00 2.59
4895 4989 9.326413 CTACCCTACAAGACCATATTTGTTAAG 57.674 37.037 0.00 0.00 38.41 1.85
4932 5026 2.110011 AGCTCCCACAATAAGGTTTGGT 59.890 45.455 0.00 0.00 0.00 3.67
4998 5092 2.279582 AAGACGATACCTGTTCAGCG 57.720 50.000 0.00 0.00 0.00 5.18
5021 5116 6.460781 ACAATGAATCCTGTAGAAACGTGTA 58.539 36.000 0.00 0.00 0.00 2.90
5035 5130 7.134815 GCATGTGTCTATGTAACAATGAATCC 58.865 38.462 0.00 0.00 0.00 3.01
5145 5240 6.716934 TCTGTAACATTCTCTGGGACTATC 57.283 41.667 0.00 0.00 0.00 2.08
5187 5282 4.160329 GGTGTCTGGTATATGAGGGATGA 58.840 47.826 0.00 0.00 0.00 2.92
5235 5330 4.357142 CATCGGAGATTTGGCATTCTTTG 58.643 43.478 2.44 0.00 45.12 2.77
5248 5343 2.028294 CAGCCTAATCTGCATCGGAGAT 60.028 50.000 0.00 0.00 45.12 2.75
5345 5440 1.045911 GCAGGGTTTGGTGGGTGAAA 61.046 55.000 0.00 0.00 0.00 2.69
5462 5866 2.673043 GCATTGCTCAAACATGTCCTGG 60.673 50.000 0.00 0.00 0.00 4.45
5615 6019 4.402155 GCTTCTTCTCTTCTCTCCAGATGA 59.598 45.833 0.00 0.00 33.04 2.92
5676 6081 1.080498 AGTGGGTAGGTGGATTCAGGA 59.920 52.381 0.00 0.00 0.00 3.86
5724 6158 1.668101 GACTACCACTCTGCCCTCCG 61.668 65.000 0.00 0.00 0.00 4.63
5841 6285 5.755409 ATAATCCACTACCTTGTGTGACA 57.245 39.130 0.00 0.00 36.38 3.58
5848 6292 6.483640 GCCTAACTGAATAATCCACTACCTTG 59.516 42.308 0.00 0.00 0.00 3.61
5926 6370 1.796459 ACAATTGTACGCGACTTCCAC 59.204 47.619 15.93 0.78 0.00 4.02
6057 12356 5.291128 GTGAATACTCATAAACTCCCACGTG 59.709 44.000 9.08 9.08 33.05 4.49
6088 12389 7.495934 AGCGCTCATTGTATTTTAACTCTACAT 59.504 33.333 2.64 0.00 0.00 2.29
6130 12433 2.940410 CAACTTTGGTGTTGTCCTACGT 59.060 45.455 0.00 0.00 41.50 3.57
6282 12618 1.219522 CCGGTTCAGTTGACGACCAC 61.220 60.000 0.00 0.00 32.41 4.16
6310 12646 2.147958 GTTCAGTTGTATGACGGCCAA 58.852 47.619 2.24 0.00 0.00 4.52
6433 12788 5.960113 TCAAACACGCATTTATAGGCAAAT 58.040 33.333 0.00 0.00 0.00 2.32
6456 12811 6.316390 CCGCAAGATAAGGTAAGTCTGATTTT 59.684 38.462 0.00 0.00 43.02 1.82
6469 12824 1.949525 CCATCCAACCGCAAGATAAGG 59.050 52.381 0.00 0.00 43.02 2.69
6471 12826 2.799126 ACCATCCAACCGCAAGATAA 57.201 45.000 0.00 0.00 43.02 1.75
6473 12828 2.238646 TCTAACCATCCAACCGCAAGAT 59.761 45.455 0.00 0.00 43.02 2.40
6474 12829 1.626321 TCTAACCATCCAACCGCAAGA 59.374 47.619 0.00 0.00 43.02 3.02
6475 12830 2.009774 CTCTAACCATCCAACCGCAAG 58.990 52.381 0.00 0.00 0.00 4.01
6476 12831 1.339631 CCTCTAACCATCCAACCGCAA 60.340 52.381 0.00 0.00 0.00 4.85
6477 12832 0.251916 CCTCTAACCATCCAACCGCA 59.748 55.000 0.00 0.00 0.00 5.69
6478 12833 0.463833 CCCTCTAACCATCCAACCGC 60.464 60.000 0.00 0.00 0.00 5.68
6479 12834 1.134491 GTCCCTCTAACCATCCAACCG 60.134 57.143 0.00 0.00 0.00 4.44
6480 12835 1.913419 TGTCCCTCTAACCATCCAACC 59.087 52.381 0.00 0.00 0.00 3.77
6481 12836 2.572104 ACTGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
6482 12837 2.571653 CACTGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
6483 12838 2.187958 CACTGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
6484 12839 1.486726 CCACTGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
6485 12840 2.188817 ACCACTGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
6486 12841 2.344093 ACCACTGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
6487 12842 3.371965 GATACCACTGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
6488 12843 2.699321 GGATACCACTGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
6504 12859 2.757124 CCTGGTGGGCTGGGGATAC 61.757 68.421 0.00 0.00 0.00 2.24
6505 12860 2.368192 CCTGGTGGGCTGGGGATA 60.368 66.667 0.00 0.00 0.00 2.59
6515 12870 0.250901 CAGGACTTGAACCCTGGTGG 60.251 60.000 0.00 0.00 44.68 4.61
6516 12871 3.329300 CAGGACTTGAACCCTGGTG 57.671 57.895 0.00 0.00 44.68 4.17
6520 12875 1.143073 GAACACCAGGACTTGAACCCT 59.857 52.381 0.00 0.00 0.00 4.34
6521 12876 1.605753 GAACACCAGGACTTGAACCC 58.394 55.000 0.00 0.00 0.00 4.11
6522 12877 1.226746 CGAACACCAGGACTTGAACC 58.773 55.000 0.00 0.00 0.00 3.62
6523 12878 0.586802 GCGAACACCAGGACTTGAAC 59.413 55.000 0.00 0.00 0.00 3.18
6524 12879 0.179234 TGCGAACACCAGGACTTGAA 59.821 50.000 0.00 0.00 0.00 2.69
6525 12880 0.396435 ATGCGAACACCAGGACTTGA 59.604 50.000 0.00 0.00 0.00 3.02
6526 12881 2.932663 ATGCGAACACCAGGACTTG 58.067 52.632 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.