Multiple sequence alignment - TraesCS2B01G590700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G590700 chr2B 100.000 4490 0 0 1 4490 776659143 776654654 0.000000e+00 8292.0
1 TraesCS2B01G590700 chr2B 91.716 2680 159 28 944 3604 776639021 776636386 0.000000e+00 3661.0
2 TraesCS2B01G590700 chr2B 90.103 2526 171 31 1141 3657 776599248 776596793 0.000000e+00 3206.0
3 TraesCS2B01G590700 chr2B 90.024 2526 173 30 1141 3657 776610355 776607900 0.000000e+00 3195.0
4 TraesCS2B01G590700 chr2B 91.849 2098 136 14 1123 3198 776418936 776421020 0.000000e+00 2894.0
5 TraesCS2B01G590700 chr2B 83.736 1242 149 28 1012 2226 776455978 776454763 0.000000e+00 1125.0
6 TraesCS2B01G590700 chr2B 98.561 556 7 1 3935 4490 359639051 359639605 0.000000e+00 981.0
7 TraesCS2B01G590700 chr2B 80.723 1245 164 29 1012 2226 786954748 786953550 0.000000e+00 900.0
8 TraesCS2B01G590700 chr2B 80.643 1245 164 36 1012 2226 786911643 786910446 0.000000e+00 893.0
9 TraesCS2B01G590700 chr2B 92.254 568 39 4 4 569 776611481 776610917 0.000000e+00 800.0
10 TraesCS2B01G590700 chr2B 93.556 450 21 5 3235 3678 776421024 776421471 0.000000e+00 664.0
11 TraesCS2B01G590700 chr2B 84.532 556 51 13 1056 1587 776554857 776554313 6.660000e-143 518.0
12 TraesCS2B01G590700 chr2B 91.667 180 15 0 3705 3884 776421470 776421649 2.680000e-62 250.0
13 TraesCS2B01G590700 chr2B 92.958 142 8 2 3608 3749 776636172 776636311 5.890000e-49 206.0
14 TraesCS2B01G590700 chr2B 87.770 139 13 4 944 1080 776418803 776418939 4.650000e-35 159.0
15 TraesCS2B01G590700 chr2B 78.049 123 24 1 2332 2454 655598656 655598775 1.730000e-09 75.0
16 TraesCS2B01G590700 chr2B 91.837 49 2 2 3800 3848 776607810 776607764 2.900000e-07 67.6
17 TraesCS2B01G590700 chr2A 90.262 1181 106 8 1453 2626 759295710 759294532 0.000000e+00 1535.0
18 TraesCS2B01G590700 chr2A 84.811 1060 128 13 1179 2226 759171489 759172527 0.000000e+00 1035.0
19 TraesCS2B01G590700 chr2A 98.014 554 4 3 3937 4490 554517298 554516752 0.000000e+00 955.0
20 TraesCS2B01G590700 chr2A 77.367 1352 208 57 2224 3521 759172555 759173862 0.000000e+00 712.0
21 TraesCS2B01G590700 chr2A 84.639 319 41 8 120 433 51185751 51185436 1.210000e-80 311.0
22 TraesCS2B01G590700 chr1B 98.917 554 5 1 3937 4490 428726938 428727490 0.000000e+00 989.0
23 TraesCS2B01G590700 chr1B 94.220 173 9 1 250 421 488414628 488414800 3.440000e-66 263.0
24 TraesCS2B01G590700 chr1B 84.066 182 26 3 127 306 305157143 305157323 5.970000e-39 172.0
25 TraesCS2B01G590700 chr4A 98.378 555 8 1 3936 4490 559057634 559058187 0.000000e+00 974.0
26 TraesCS2B01G590700 chr7A 97.838 555 11 1 3936 4490 494198692 494198139 0.000000e+00 957.0
27 TraesCS2B01G590700 chr7A 94.500 400 17 4 4093 4490 678606671 678606275 2.970000e-171 612.0
28 TraesCS2B01G590700 chr7A 93.838 357 19 3 4136 4490 238253669 238254024 6.610000e-148 534.0
29 TraesCS2B01G590700 chr7A 80.995 221 39 3 177 395 403363283 403363064 5.970000e-39 172.0
30 TraesCS2B01G590700 chr7A 86.047 86 9 3 124 207 108818516 108818600 6.190000e-14 89.8
31 TraesCS2B01G590700 chr3B 98.276 522 7 2 3970 4490 520469969 520469449 0.000000e+00 913.0
32 TraesCS2B01G590700 chr3B 87.209 86 8 3 124 207 133001503 133001587 1.330000e-15 95.3
33 TraesCS2B01G590700 chr2D 93.764 449 28 0 424 872 507843084 507842636 0.000000e+00 675.0
34 TraesCS2B01G590700 chr2D 92.308 390 30 0 485 874 619089049 619089438 5.070000e-154 555.0
35 TraesCS2B01G590700 chr2D 98.684 76 1 0 49 124 507843150 507843075 7.830000e-28 135.0
36 TraesCS2B01G590700 chr2D 72.184 435 82 22 2056 2454 548447525 548447956 3.700000e-16 97.1
37 TraesCS2B01G590700 chr2D 96.000 50 2 0 4 53 507851906 507851857 1.040000e-11 82.4
38 TraesCS2B01G590700 chr4B 93.049 446 31 0 424 869 476878012 476878457 0.000000e+00 652.0
39 TraesCS2B01G590700 chr4B 94.355 124 7 0 1 124 476877898 476878021 1.650000e-44 191.0
40 TraesCS2B01G590700 chr3A 93.500 400 17 5 4093 4490 750212906 750212514 1.800000e-163 586.0
41 TraesCS2B01G590700 chr5D 88.945 398 40 2 424 821 552688442 552688049 5.220000e-134 488.0
42 TraesCS2B01G590700 chr5A 84.385 301 41 6 125 421 692840555 692840257 1.580000e-74 291.0
43 TraesCS2B01G590700 chr6A 84.083 289 40 6 125 409 320444721 320444435 1.590000e-69 274.0
44 TraesCS2B01G590700 chr6A 88.189 127 12 3 126 250 578443136 578443011 1.010000e-31 148.0
45 TraesCS2B01G590700 chr6D 76.981 265 31 19 123 386 470959502 470959267 1.700000e-24 124.0
46 TraesCS2B01G590700 chrUn 87.879 99 8 4 3935 4032 348352819 348352724 3.670000e-21 113.0
47 TraesCS2B01G590700 chrUn 87.879 99 8 4 3935 4032 348355150 348355055 3.670000e-21 113.0
48 TraesCS2B01G590700 chrUn 87.255 102 9 4 3932 4032 408166193 408166291 3.670000e-21 113.0
49 TraesCS2B01G590700 chr7B 86.047 86 9 3 124 207 336839301 336839385 6.190000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G590700 chr2B 776654654 776659143 4489 True 8292.00 8292 100.000000 1 4490 1 chr2B.!!$R5 4489
1 TraesCS2B01G590700 chr2B 776636386 776639021 2635 True 3661.00 3661 91.716000 944 3604 1 chr2B.!!$R4 2660
2 TraesCS2B01G590700 chr2B 776596793 776599248 2455 True 3206.00 3206 90.103000 1141 3657 1 chr2B.!!$R3 2516
3 TraesCS2B01G590700 chr2B 776607764 776611481 3717 True 1354.20 3195 91.371667 4 3848 3 chr2B.!!$R8 3844
4 TraesCS2B01G590700 chr2B 776454763 776455978 1215 True 1125.00 1125 83.736000 1012 2226 1 chr2B.!!$R1 1214
5 TraesCS2B01G590700 chr2B 776418803 776421649 2846 False 991.75 2894 91.210500 944 3884 4 chr2B.!!$F4 2940
6 TraesCS2B01G590700 chr2B 359639051 359639605 554 False 981.00 981 98.561000 3935 4490 1 chr2B.!!$F1 555
7 TraesCS2B01G590700 chr2B 786953550 786954748 1198 True 900.00 900 80.723000 1012 2226 1 chr2B.!!$R7 1214
8 TraesCS2B01G590700 chr2B 786910446 786911643 1197 True 893.00 893 80.643000 1012 2226 1 chr2B.!!$R6 1214
9 TraesCS2B01G590700 chr2B 776554313 776554857 544 True 518.00 518 84.532000 1056 1587 1 chr2B.!!$R2 531
10 TraesCS2B01G590700 chr2A 759294532 759295710 1178 True 1535.00 1535 90.262000 1453 2626 1 chr2A.!!$R3 1173
11 TraesCS2B01G590700 chr2A 554516752 554517298 546 True 955.00 955 98.014000 3937 4490 1 chr2A.!!$R2 553
12 TraesCS2B01G590700 chr2A 759171489 759173862 2373 False 873.50 1035 81.089000 1179 3521 2 chr2A.!!$F1 2342
13 TraesCS2B01G590700 chr1B 428726938 428727490 552 False 989.00 989 98.917000 3937 4490 1 chr1B.!!$F2 553
14 TraesCS2B01G590700 chr4A 559057634 559058187 553 False 974.00 974 98.378000 3936 4490 1 chr4A.!!$F1 554
15 TraesCS2B01G590700 chr7A 494198139 494198692 553 True 957.00 957 97.838000 3936 4490 1 chr7A.!!$R2 554
16 TraesCS2B01G590700 chr3B 520469449 520469969 520 True 913.00 913 98.276000 3970 4490 1 chr3B.!!$R1 520
17 TraesCS2B01G590700 chr2D 507842636 507843150 514 True 405.00 675 96.224000 49 872 2 chr2D.!!$R2 823
18 TraesCS2B01G590700 chr4B 476877898 476878457 559 False 421.50 652 93.702000 1 869 2 chr4B.!!$F1 868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.036952 AGATCCGGTGACTTGCTGTG 60.037 55.0 0.00 0.0 0.00 3.66 F
249 250 0.039326 ACAGTACCCCGAGCTACAGT 59.961 55.0 0.00 0.0 0.00 3.55 F
346 347 0.106335 AGAGCATTCGATCTGGGCTG 59.894 55.0 3.27 0.0 36.26 4.85 F
545 856 0.107993 TGGAAGGCTTGATGCTCTCG 60.108 55.0 3.46 0.0 42.39 4.04 F
712 1023 0.385751 ACTCACATCCATCGTAGCCG 59.614 55.0 0.00 0.0 0.00 5.52 F
2509 3261 0.533308 AAAAGAGTACCGTTGCCGCA 60.533 50.0 0.00 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1119 1746 0.169009 GGATTGTTTGCGAGGTGCTC 59.831 55.000 0.00 0.00 46.63 4.26 R
1120 1747 0.537143 TGGATTGTTTGCGAGGTGCT 60.537 50.000 0.00 0.00 46.63 4.40 R
2075 2789 0.611714 GAGGTACGGGTGTTGGTGAT 59.388 55.000 0.00 0.00 0.00 3.06 R
2434 3179 1.191489 TGGTTGATCCTGACGGCAGA 61.191 55.000 23.07 6.33 45.17 4.26 R
2557 3309 1.150536 GCCCCACTTGACTTGGACA 59.849 57.895 0.00 0.00 36.02 4.02 R
3929 4748 0.924090 GCTAGACGCGTCCAAGAATG 59.076 55.000 34.08 17.08 0.00 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.038282 TGTCAGTACATGTGGTAACGACTT 59.962 41.667 9.11 0.00 36.80 3.01
34 35 5.010314 TCAGTACATGTGGTAACGACTTTCT 59.990 40.000 9.11 0.00 42.51 2.52
41 42 8.073768 ACATGTGGTAACGACTTTCTTAATTTG 58.926 33.333 0.00 0.00 42.51 2.32
108 109 8.155510 CAGATGGATCTTTCTCTGATGGAATTA 58.844 37.037 7.96 0.00 37.85 1.40
122 123 3.355378 TGGAATTAGTGGTGCTGGAATG 58.645 45.455 0.00 0.00 0.00 2.67
123 124 2.689983 GGAATTAGTGGTGCTGGAATGG 59.310 50.000 0.00 0.00 0.00 3.16
124 125 2.442236 ATTAGTGGTGCTGGAATGGG 57.558 50.000 0.00 0.00 0.00 4.00
125 126 0.331278 TTAGTGGTGCTGGAATGGGG 59.669 55.000 0.00 0.00 0.00 4.96
126 127 0.548926 TAGTGGTGCTGGAATGGGGA 60.549 55.000 0.00 0.00 0.00 4.81
127 128 1.678970 GTGGTGCTGGAATGGGGAC 60.679 63.158 0.00 0.00 0.00 4.46
128 129 1.852157 TGGTGCTGGAATGGGGACT 60.852 57.895 0.00 0.00 0.00 3.85
129 130 1.379044 GGTGCTGGAATGGGGACTG 60.379 63.158 0.00 0.00 0.00 3.51
130 131 1.685224 GTGCTGGAATGGGGACTGA 59.315 57.895 0.00 0.00 0.00 3.41
131 132 0.393537 GTGCTGGAATGGGGACTGAG 60.394 60.000 0.00 0.00 0.00 3.35
132 133 0.547471 TGCTGGAATGGGGACTGAGA 60.547 55.000 0.00 0.00 0.00 3.27
133 134 0.842635 GCTGGAATGGGGACTGAGAT 59.157 55.000 0.00 0.00 0.00 2.75
134 135 1.202746 GCTGGAATGGGGACTGAGATC 60.203 57.143 0.00 0.00 0.00 2.75
135 136 1.419387 CTGGAATGGGGACTGAGATCC 59.581 57.143 0.00 0.00 38.13 3.36
136 137 0.394565 GGAATGGGGACTGAGATCCG 59.605 60.000 0.00 0.00 39.97 4.18
137 138 0.394565 GAATGGGGACTGAGATCCGG 59.605 60.000 0.00 0.00 39.97 5.14
138 139 0.326618 AATGGGGACTGAGATCCGGT 60.327 55.000 0.00 0.00 39.97 5.28
139 140 1.050988 ATGGGGACTGAGATCCGGTG 61.051 60.000 0.00 0.00 39.97 4.94
140 141 1.381327 GGGGACTGAGATCCGGTGA 60.381 63.158 0.00 0.00 39.97 4.02
141 142 1.677637 GGGGACTGAGATCCGGTGAC 61.678 65.000 0.00 0.00 39.97 3.67
142 143 0.684805 GGGACTGAGATCCGGTGACT 60.685 60.000 0.00 0.00 39.97 3.41
143 144 1.187087 GGACTGAGATCCGGTGACTT 58.813 55.000 0.00 0.00 33.70 3.01
144 145 1.134965 GGACTGAGATCCGGTGACTTG 60.135 57.143 0.00 0.43 33.70 3.16
145 146 0.247736 ACTGAGATCCGGTGACTTGC 59.752 55.000 0.00 0.00 31.94 4.01
146 147 0.534412 CTGAGATCCGGTGACTTGCT 59.466 55.000 0.00 0.00 0.00 3.91
147 148 0.247460 TGAGATCCGGTGACTTGCTG 59.753 55.000 0.00 0.00 0.00 4.41
148 149 0.247736 GAGATCCGGTGACTTGCTGT 59.752 55.000 0.00 0.00 0.00 4.40
149 150 0.036952 AGATCCGGTGACTTGCTGTG 60.037 55.000 0.00 0.00 0.00 3.66
150 151 1.003355 ATCCGGTGACTTGCTGTGG 60.003 57.895 0.00 0.00 0.00 4.17
151 152 1.480212 ATCCGGTGACTTGCTGTGGA 61.480 55.000 0.00 0.00 0.00 4.02
152 153 1.961277 CCGGTGACTTGCTGTGGAC 60.961 63.158 0.00 0.00 0.00 4.02
153 154 1.227527 CGGTGACTTGCTGTGGACA 60.228 57.895 0.00 0.00 0.00 4.02
154 155 0.813610 CGGTGACTTGCTGTGGACAA 60.814 55.000 0.00 0.00 0.00 3.18
161 162 1.531149 CTTGCTGTGGACAAGTAACCG 59.469 52.381 0.00 0.00 39.73 4.44
162 163 0.250124 TGCTGTGGACAAGTAACCGG 60.250 55.000 0.00 0.00 0.00 5.28
163 164 0.250166 GCTGTGGACAAGTAACCGGT 60.250 55.000 0.00 0.00 0.00 5.28
164 165 1.508632 CTGTGGACAAGTAACCGGTG 58.491 55.000 8.52 0.00 0.00 4.94
165 166 1.069513 CTGTGGACAAGTAACCGGTGA 59.930 52.381 8.52 0.00 0.00 4.02
166 167 1.485480 TGTGGACAAGTAACCGGTGAA 59.515 47.619 8.52 0.00 0.00 3.18
167 168 1.869132 GTGGACAAGTAACCGGTGAAC 59.131 52.381 8.52 10.42 0.00 3.18
168 169 1.485480 TGGACAAGTAACCGGTGAACA 59.515 47.619 8.52 0.00 0.00 3.18
169 170 2.140717 GGACAAGTAACCGGTGAACAG 58.859 52.381 8.52 9.36 0.00 3.16
170 171 2.484241 GGACAAGTAACCGGTGAACAGT 60.484 50.000 8.52 12.56 0.00 3.55
171 172 3.243839 GGACAAGTAACCGGTGAACAGTA 60.244 47.826 8.52 0.00 0.00 2.74
172 173 3.721035 ACAAGTAACCGGTGAACAGTAC 58.279 45.455 8.52 5.71 0.00 2.73
173 174 2.712057 AGTAACCGGTGAACAGTACG 57.288 50.000 8.52 0.00 0.00 3.67
176 177 4.255126 CCGGTGAACAGTACGGTG 57.745 61.111 0.00 0.00 41.34 4.94
177 178 2.025418 CCGGTGAACAGTACGGTGC 61.025 63.158 0.00 0.00 41.34 5.01
178 179 2.025418 CGGTGAACAGTACGGTGCC 61.025 63.158 0.00 2.36 0.00 5.01
179 180 1.370064 GGTGAACAGTACGGTGCCT 59.630 57.895 0.00 0.00 0.00 4.75
180 181 0.949105 GGTGAACAGTACGGTGCCTG 60.949 60.000 0.00 7.76 34.82 4.85
181 182 0.949105 GTGAACAGTACGGTGCCTGG 60.949 60.000 0.00 0.00 32.90 4.45
182 183 2.032071 AACAGTACGGTGCCTGGC 59.968 61.111 12.87 12.87 32.90 4.85
183 184 3.546714 AACAGTACGGTGCCTGGCC 62.547 63.158 17.53 7.43 32.90 5.36
184 185 4.778143 CAGTACGGTGCCTGGCCC 62.778 72.222 17.53 15.55 0.00 5.80
191 192 4.432741 GTGCCTGGCCCCCTTCTC 62.433 72.222 17.53 0.00 0.00 2.87
195 196 3.787001 CTGGCCCCCTTCTCCGAC 61.787 72.222 0.00 0.00 0.00 4.79
196 197 4.332543 TGGCCCCCTTCTCCGACT 62.333 66.667 0.00 0.00 0.00 4.18
197 198 3.787001 GGCCCCCTTCTCCGACTG 61.787 72.222 0.00 0.00 0.00 3.51
198 199 3.003763 GCCCCCTTCTCCGACTGT 61.004 66.667 0.00 0.00 0.00 3.55
199 200 3.020237 GCCCCCTTCTCCGACTGTC 62.020 68.421 0.00 0.00 0.00 3.51
200 201 2.711922 CCCCCTTCTCCGACTGTCG 61.712 68.421 22.49 22.49 40.07 4.35
211 212 2.851805 CGACTGTCGGATCAAGATCA 57.148 50.000 21.78 0.00 39.54 2.92
212 213 2.725490 CGACTGTCGGATCAAGATCAG 58.275 52.381 21.78 7.97 39.54 2.90
213 214 2.468831 GACTGTCGGATCAAGATCAGC 58.531 52.381 11.78 5.39 39.54 4.26
214 215 1.202348 ACTGTCGGATCAAGATCAGCG 60.202 52.381 11.78 7.25 39.54 5.18
215 216 0.103026 TGTCGGATCAAGATCAGCGG 59.897 55.000 11.78 0.00 39.54 5.52
216 217 0.385751 GTCGGATCAAGATCAGCGGA 59.614 55.000 11.78 0.00 39.54 5.54
217 218 1.000283 GTCGGATCAAGATCAGCGGAT 60.000 52.381 11.78 0.00 39.54 4.18
218 219 1.000171 TCGGATCAAGATCAGCGGATG 60.000 52.381 3.36 0.00 39.54 3.51
219 220 1.805869 GGATCAAGATCAGCGGATGG 58.194 55.000 3.36 0.00 39.54 3.51
220 221 1.345741 GGATCAAGATCAGCGGATGGA 59.654 52.381 3.36 0.00 39.54 3.41
221 222 2.612471 GGATCAAGATCAGCGGATGGAG 60.612 54.545 3.36 0.00 39.54 3.86
222 223 0.105593 TCAAGATCAGCGGATGGAGC 59.894 55.000 3.36 0.00 32.67 4.70
224 225 0.835941 AAGATCAGCGGATGGAGCTT 59.164 50.000 3.36 0.00 44.06 3.74
225 226 0.392336 AGATCAGCGGATGGAGCTTC 59.608 55.000 3.36 0.00 44.06 3.86
226 227 0.943359 GATCAGCGGATGGAGCTTCG 60.943 60.000 3.36 0.00 44.06 3.79
227 228 1.680522 ATCAGCGGATGGAGCTTCGT 61.681 55.000 0.00 0.00 44.06 3.85
228 229 2.169789 CAGCGGATGGAGCTTCGTG 61.170 63.158 0.00 0.00 44.06 4.35
229 230 2.184322 GCGGATGGAGCTTCGTGA 59.816 61.111 0.00 0.00 0.00 4.35
230 231 1.447838 GCGGATGGAGCTTCGTGAA 60.448 57.895 0.00 0.00 0.00 3.18
231 232 1.696832 GCGGATGGAGCTTCGTGAAC 61.697 60.000 0.00 0.00 0.00 3.18
232 233 0.389817 CGGATGGAGCTTCGTGAACA 60.390 55.000 0.00 0.00 0.00 3.18
233 234 1.363744 GGATGGAGCTTCGTGAACAG 58.636 55.000 0.00 0.00 0.00 3.16
234 235 1.338200 GGATGGAGCTTCGTGAACAGT 60.338 52.381 0.00 0.00 0.00 3.55
235 236 2.094182 GGATGGAGCTTCGTGAACAGTA 60.094 50.000 0.00 0.00 0.00 2.74
236 237 2.433868 TGGAGCTTCGTGAACAGTAC 57.566 50.000 0.00 0.00 0.00 2.73
237 238 1.000506 TGGAGCTTCGTGAACAGTACC 59.999 52.381 0.00 0.00 0.00 3.34
238 239 1.672145 GGAGCTTCGTGAACAGTACCC 60.672 57.143 0.00 0.00 0.00 3.69
239 240 0.320697 AGCTTCGTGAACAGTACCCC 59.679 55.000 0.00 0.00 0.00 4.95
240 241 1.012486 GCTTCGTGAACAGTACCCCG 61.012 60.000 0.00 0.00 0.00 5.73
241 242 0.599558 CTTCGTGAACAGTACCCCGA 59.400 55.000 0.00 0.00 0.00 5.14
242 243 0.599558 TTCGTGAACAGTACCCCGAG 59.400 55.000 0.00 0.00 0.00 4.63
243 244 1.445582 CGTGAACAGTACCCCGAGC 60.446 63.158 0.00 0.00 0.00 5.03
244 245 1.874345 CGTGAACAGTACCCCGAGCT 61.874 60.000 0.00 0.00 0.00 4.09
245 246 1.180029 GTGAACAGTACCCCGAGCTA 58.820 55.000 0.00 0.00 0.00 3.32
246 247 1.135170 GTGAACAGTACCCCGAGCTAC 60.135 57.143 0.00 0.00 0.00 3.58
247 248 1.180029 GAACAGTACCCCGAGCTACA 58.820 55.000 0.00 0.00 0.00 2.74
248 249 1.134560 GAACAGTACCCCGAGCTACAG 59.865 57.143 0.00 0.00 0.00 2.74
249 250 0.039326 ACAGTACCCCGAGCTACAGT 59.961 55.000 0.00 0.00 0.00 3.55
250 251 0.456221 CAGTACCCCGAGCTACAGTG 59.544 60.000 0.00 0.00 0.00 3.66
251 252 0.683504 AGTACCCCGAGCTACAGTGG 60.684 60.000 0.00 0.00 0.00 4.00
252 253 0.969409 GTACCCCGAGCTACAGTGGT 60.969 60.000 0.00 0.00 0.00 4.16
253 254 0.682209 TACCCCGAGCTACAGTGGTC 60.682 60.000 0.00 0.00 0.00 4.02
254 255 2.722201 CCCCGAGCTACAGTGGTCC 61.722 68.421 0.00 0.00 0.00 4.46
255 256 2.490217 CCGAGCTACAGTGGTCCG 59.510 66.667 0.00 0.00 0.00 4.79
256 257 2.341101 CCGAGCTACAGTGGTCCGT 61.341 63.158 0.00 0.00 0.00 4.69
257 258 1.136984 CGAGCTACAGTGGTCCGTC 59.863 63.158 0.00 0.00 0.00 4.79
258 259 1.306642 CGAGCTACAGTGGTCCGTCT 61.307 60.000 0.00 0.00 0.00 4.18
259 260 1.747709 GAGCTACAGTGGTCCGTCTA 58.252 55.000 0.00 0.00 0.00 2.59
260 261 1.401199 GAGCTACAGTGGTCCGTCTAC 59.599 57.143 0.00 0.00 0.00 2.59
261 262 1.171308 GCTACAGTGGTCCGTCTACA 58.829 55.000 0.00 0.00 0.00 2.74
262 263 1.132643 GCTACAGTGGTCCGTCTACAG 59.867 57.143 0.00 0.00 0.00 2.74
263 264 1.743958 CTACAGTGGTCCGTCTACAGG 59.256 57.143 0.00 0.00 0.00 4.00
264 265 0.111832 ACAGTGGTCCGTCTACAGGA 59.888 55.000 0.00 0.00 34.99 3.86
265 266 1.254026 CAGTGGTCCGTCTACAGGAA 58.746 55.000 0.00 0.00 39.84 3.36
266 267 1.067776 CAGTGGTCCGTCTACAGGAAC 60.068 57.143 0.00 0.00 45.46 3.62
267 268 1.203025 AGTGGTCCGTCTACAGGAACT 60.203 52.381 1.82 0.00 45.46 3.01
268 269 1.617357 GTGGTCCGTCTACAGGAACTT 59.383 52.381 1.82 0.00 45.46 2.66
269 270 1.616865 TGGTCCGTCTACAGGAACTTG 59.383 52.381 1.82 0.00 45.46 3.16
270 271 1.617357 GGTCCGTCTACAGGAACTTGT 59.383 52.381 0.00 0.00 42.08 3.16
271 272 2.821969 GGTCCGTCTACAGGAACTTGTA 59.178 50.000 0.00 0.00 42.08 2.41
272 273 3.446516 GGTCCGTCTACAGGAACTTGTAT 59.553 47.826 0.00 0.00 42.08 2.29
273 274 4.641989 GGTCCGTCTACAGGAACTTGTATA 59.358 45.833 0.00 0.00 42.08 1.47
274 275 5.449725 GGTCCGTCTACAGGAACTTGTATAC 60.450 48.000 0.00 0.00 42.08 1.47
275 276 5.356470 GTCCGTCTACAGGAACTTGTATACT 59.644 44.000 4.17 0.00 39.84 2.12
276 277 5.356190 TCCGTCTACAGGAACTTGTATACTG 59.644 44.000 4.17 0.00 34.60 2.74
277 278 5.035443 CGTCTACAGGAACTTGTATACTGC 58.965 45.833 4.17 0.00 34.60 4.40
278 279 5.035443 GTCTACAGGAACTTGTATACTGCG 58.965 45.833 4.17 0.00 34.60 5.18
279 280 3.247006 ACAGGAACTTGTATACTGCGG 57.753 47.619 4.17 0.00 34.60 5.69
280 281 2.829720 ACAGGAACTTGTATACTGCGGA 59.170 45.455 0.00 0.00 34.60 5.54
281 282 3.187700 CAGGAACTTGTATACTGCGGAC 58.812 50.000 0.00 0.00 34.60 4.79
282 283 2.159282 AGGAACTTGTATACTGCGGACG 60.159 50.000 0.00 0.00 27.25 4.79
283 284 2.159338 GGAACTTGTATACTGCGGACGA 60.159 50.000 0.00 0.00 0.00 4.20
284 285 2.846039 ACTTGTATACTGCGGACGAG 57.154 50.000 0.00 0.00 0.00 4.18
285 286 1.202268 ACTTGTATACTGCGGACGAGC 60.202 52.381 0.00 0.00 37.71 5.03
286 287 1.065701 CTTGTATACTGCGGACGAGCT 59.934 52.381 0.00 0.00 38.13 4.09
287 288 1.957668 TGTATACTGCGGACGAGCTA 58.042 50.000 0.00 0.00 38.13 3.32
288 289 1.600957 TGTATACTGCGGACGAGCTAC 59.399 52.381 0.00 0.00 38.13 3.58
289 290 1.600957 GTATACTGCGGACGAGCTACA 59.399 52.381 0.00 0.00 38.13 2.74
290 291 0.663688 ATACTGCGGACGAGCTACAG 59.336 55.000 0.00 0.00 38.13 2.74
291 292 0.675837 TACTGCGGACGAGCTACAGT 60.676 55.000 0.00 1.68 43.60 3.55
292 293 1.515088 CTGCGGACGAGCTACAGTG 60.515 63.158 0.00 0.00 38.13 3.66
293 294 1.923227 CTGCGGACGAGCTACAGTGA 61.923 60.000 0.00 0.00 38.13 3.41
294 295 1.313091 TGCGGACGAGCTACAGTGAT 61.313 55.000 0.00 0.00 38.13 3.06
295 296 0.179134 GCGGACGAGCTACAGTGATT 60.179 55.000 0.00 0.00 0.00 2.57
296 297 1.828832 CGGACGAGCTACAGTGATTC 58.171 55.000 0.00 0.00 0.00 2.52
297 298 1.828832 GGACGAGCTACAGTGATTCG 58.171 55.000 0.00 3.10 37.31 3.34
298 299 1.192793 GACGAGCTACAGTGATTCGC 58.807 55.000 0.00 0.00 34.84 4.70
299 300 0.526211 ACGAGCTACAGTGATTCGCA 59.474 50.000 0.00 0.00 34.84 5.10
300 301 1.135139 ACGAGCTACAGTGATTCGCAT 59.865 47.619 0.00 0.00 34.84 4.73
301 302 2.357952 ACGAGCTACAGTGATTCGCATA 59.642 45.455 0.00 0.00 34.84 3.14
302 303 2.721603 CGAGCTACAGTGATTCGCATAC 59.278 50.000 0.00 0.00 0.00 2.39
303 304 3.706698 GAGCTACAGTGATTCGCATACA 58.293 45.455 0.00 0.00 0.00 2.29
304 305 3.711086 AGCTACAGTGATTCGCATACAG 58.289 45.455 0.00 0.00 0.00 2.74
305 306 3.131223 AGCTACAGTGATTCGCATACAGT 59.869 43.478 0.00 0.00 0.00 3.55
306 307 4.338400 AGCTACAGTGATTCGCATACAGTA 59.662 41.667 0.00 0.00 0.00 2.74
307 308 4.441415 GCTACAGTGATTCGCATACAGTAC 59.559 45.833 0.00 0.00 0.00 2.73
308 309 3.782046 ACAGTGATTCGCATACAGTACC 58.218 45.455 0.00 0.00 0.00 3.34
309 310 2.789339 CAGTGATTCGCATACAGTACCG 59.211 50.000 0.00 0.00 0.00 4.02
310 311 2.124903 GTGATTCGCATACAGTACCGG 58.875 52.381 0.00 0.00 0.00 5.28
311 312 1.137513 GATTCGCATACAGTACCGGC 58.862 55.000 0.00 0.00 0.00 6.13
312 313 0.249741 ATTCGCATACAGTACCGGCC 60.250 55.000 0.00 0.00 0.00 6.13
313 314 1.605971 TTCGCATACAGTACCGGCCA 61.606 55.000 0.00 0.00 0.00 5.36
314 315 1.881252 CGCATACAGTACCGGCCAC 60.881 63.158 0.00 0.00 0.00 5.01
315 316 1.523032 GCATACAGTACCGGCCACC 60.523 63.158 0.00 0.00 0.00 4.61
317 318 1.683365 ATACAGTACCGGCCACCGT 60.683 57.895 0.00 0.45 46.80 4.83
318 319 1.952102 ATACAGTACCGGCCACCGTG 61.952 60.000 0.00 0.00 46.80 4.94
319 320 3.687102 CAGTACCGGCCACCGTGA 61.687 66.667 0.00 0.00 46.80 4.35
320 321 2.682494 AGTACCGGCCACCGTGAT 60.682 61.111 0.00 0.00 46.80 3.06
321 322 2.266689 GTACCGGCCACCGTGATT 59.733 61.111 0.00 0.00 46.80 2.57
322 323 1.376295 GTACCGGCCACCGTGATTT 60.376 57.895 0.00 0.00 46.80 2.17
323 324 0.956902 GTACCGGCCACCGTGATTTT 60.957 55.000 0.00 0.00 46.80 1.82
324 325 0.956410 TACCGGCCACCGTGATTTTG 60.956 55.000 0.00 0.00 46.80 2.44
325 326 2.126502 CGGCCACCGTGATTTTGC 60.127 61.111 2.24 0.00 42.73 3.68
326 327 2.625823 CGGCCACCGTGATTTTGCT 61.626 57.895 2.24 0.00 42.73 3.91
327 328 1.302383 CGGCCACCGTGATTTTGCTA 61.302 55.000 2.24 0.00 42.73 3.49
328 329 0.451783 GGCCACCGTGATTTTGCTAG 59.548 55.000 0.00 0.00 0.00 3.42
329 330 1.448985 GCCACCGTGATTTTGCTAGA 58.551 50.000 0.00 0.00 0.00 2.43
330 331 1.398390 GCCACCGTGATTTTGCTAGAG 59.602 52.381 0.00 0.00 0.00 2.43
331 332 1.398390 CCACCGTGATTTTGCTAGAGC 59.602 52.381 0.00 0.00 42.50 4.09
343 344 2.077413 GCTAGAGCATTCGATCTGGG 57.923 55.000 0.00 0.00 38.64 4.45
344 345 1.938926 GCTAGAGCATTCGATCTGGGC 60.939 57.143 0.00 0.00 38.64 5.36
345 346 1.617850 CTAGAGCATTCGATCTGGGCT 59.382 52.381 0.00 0.00 38.64 5.19
346 347 0.106335 AGAGCATTCGATCTGGGCTG 59.894 55.000 3.27 0.00 36.26 4.85
347 348 1.505477 GAGCATTCGATCTGGGCTGC 61.505 60.000 3.27 0.00 34.44 5.25
348 349 2.550101 GCATTCGATCTGGGCTGCC 61.550 63.158 11.05 11.05 0.00 4.85
349 350 1.895707 CATTCGATCTGGGCTGCCC 60.896 63.158 30.97 30.97 45.71 5.36
358 359 3.505773 GGGCTGCCCATCCTCCAT 61.506 66.667 32.46 0.00 44.65 3.41
359 360 2.114838 GGCTGCCCATCCTCCATC 59.885 66.667 7.66 0.00 0.00 3.51
360 361 2.114838 GCTGCCCATCCTCCATCC 59.885 66.667 0.00 0.00 0.00 3.51
361 362 2.760378 GCTGCCCATCCTCCATCCA 61.760 63.158 0.00 0.00 0.00 3.41
362 363 1.925120 CTGCCCATCCTCCATCCAA 59.075 57.895 0.00 0.00 0.00 3.53
363 364 0.481567 CTGCCCATCCTCCATCCAAT 59.518 55.000 0.00 0.00 0.00 3.16
364 365 0.186630 TGCCCATCCTCCATCCAATG 59.813 55.000 0.00 0.00 0.00 2.82
376 377 4.023137 CCAATGGTTGGCCTCCTG 57.977 61.111 16.22 8.73 45.17 3.86
377 378 2.353610 CCAATGGTTGGCCTCCTGC 61.354 63.158 16.22 0.00 45.17 4.85
395 396 3.475774 CGGTTACGGCGTGACTGC 61.476 66.667 29.70 16.05 36.18 4.40
411 412 2.046507 GCCAGAGGCCAGTCACTG 60.047 66.667 5.01 0.00 44.06 3.66
422 423 2.007360 CAGTCACTGGATCTCTGTGC 57.993 55.000 0.00 9.80 42.67 4.57
423 424 0.529833 AGTCACTGGATCTCTGTGCG 59.470 55.000 12.99 0.00 42.67 5.34
424 425 1.080995 GTCACTGGATCTCTGTGCGC 61.081 60.000 0.00 0.00 42.67 6.09
425 426 1.217511 CACTGGATCTCTGTGCGCT 59.782 57.895 9.73 0.00 38.23 5.92
426 427 1.082679 CACTGGATCTCTGTGCGCTG 61.083 60.000 9.73 0.00 38.23 5.18
427 428 1.521010 CTGGATCTCTGTGCGCTGG 60.521 63.158 9.73 0.00 0.00 4.85
428 429 1.953231 CTGGATCTCTGTGCGCTGGA 61.953 60.000 9.73 3.03 0.00 3.86
429 430 1.219124 GGATCTCTGTGCGCTGGAA 59.781 57.895 9.73 0.00 0.00 3.53
430 431 0.179062 GGATCTCTGTGCGCTGGAAT 60.179 55.000 9.73 0.00 0.00 3.01
475 786 6.541641 GGAAGTATCATCTTCACTTCTTGCAT 59.458 38.462 12.05 0.00 44.84 3.96
501 812 1.644786 GCCCTTTTGCTATGACGCGT 61.645 55.000 13.85 13.85 0.00 6.01
506 817 2.873170 TTTGCTATGACGCGTTTGAG 57.127 45.000 15.53 12.02 0.00 3.02
545 856 0.107993 TGGAAGGCTTGATGCTCTCG 60.108 55.000 3.46 0.00 42.39 4.04
578 889 7.709182 TGGAGTACGTTACCAATTGATATTGAG 59.291 37.037 7.12 0.00 43.12 3.02
589 900 7.830697 ACCAATTGATATTGAGTCAGATTGTCA 59.169 33.333 7.12 0.00 43.12 3.58
590 901 8.680001 CCAATTGATATTGAGTCAGATTGTCAA 58.320 33.333 7.12 11.56 43.12 3.18
619 930 5.122396 GTGTTTCTATGGTGCAGAGTAAAGG 59.878 44.000 0.00 0.00 0.00 3.11
703 1014 6.761242 CGGAATTCTTGTATTACTCACATCCA 59.239 38.462 5.23 0.00 0.00 3.41
712 1023 0.385751 ACTCACATCCATCGTAGCCG 59.614 55.000 0.00 0.00 0.00 5.52
733 1044 5.063564 GCCGAAATATTGCTAGCCACTATAC 59.936 44.000 13.29 0.00 0.00 1.47
758 1069 5.067805 GGCAAATTTTGATAGGACTAGTGGG 59.932 44.000 13.26 0.00 0.00 4.61
830 1452 7.599630 TTGTAAACGTGATTGTAATCCCTAC 57.400 36.000 0.00 0.00 34.50 3.18
932 1554 8.893727 ACTCAAACTTACATGAGCATTATTACC 58.106 33.333 0.00 0.00 45.50 2.85
937 1559 9.461312 AACTTACATGAGCATTATTACCAGAAA 57.539 29.630 0.00 0.00 0.00 2.52
938 1560 9.461312 ACTTACATGAGCATTATTACCAGAAAA 57.539 29.630 0.00 0.00 0.00 2.29
940 1562 7.338800 ACATGAGCATTATTACCAGAAAAGG 57.661 36.000 0.00 0.00 0.00 3.11
942 1564 7.615365 ACATGAGCATTATTACCAGAAAAGGAA 59.385 33.333 0.00 0.00 0.00 3.36
978 1600 4.436332 CCACCCGAAGTTACTTACCATAC 58.564 47.826 0.00 0.00 0.00 2.39
1008 1630 3.305403 CGATTATGCACAGGACCGAGTAT 60.305 47.826 0.00 0.00 0.00 2.12
1015 1637 3.223435 CACAGGACCGAGTATCATAGGT 58.777 50.000 0.00 0.00 40.11 3.08
1066 1688 4.442706 CCGATGCCTATTATTCGCCTATT 58.557 43.478 0.00 0.00 0.00 1.73
1077 1699 9.244799 CTATTATTCGCCTATTTATATGCACGA 57.755 33.333 0.00 0.00 0.00 4.35
1078 1700 5.779806 ATTCGCCTATTTATATGCACGAC 57.220 39.130 0.00 0.00 0.00 4.34
1084 1706 2.631160 TTTATATGCACGACCCCCTG 57.369 50.000 0.00 0.00 0.00 4.45
1085 1707 1.502690 TTATATGCACGACCCCCTGT 58.497 50.000 0.00 0.00 0.00 4.00
1100 1727 0.792640 CCTGTCTAGCTTGCAACACG 59.207 55.000 0.00 0.00 0.00 4.49
1105 1732 0.944311 CTAGCTTGCAACACGACCGT 60.944 55.000 0.00 0.00 0.00 4.83
1115 1742 3.502455 ACGACCGTGAGCGCGATA 61.502 61.111 12.10 0.00 36.67 2.92
1117 1744 2.101575 GACCGTGAGCGCGATACA 59.898 61.111 12.10 0.30 36.67 2.29
1118 1745 2.202570 ACCGTGAGCGCGATACAC 60.203 61.111 12.10 13.51 36.67 2.90
1189 1875 1.153369 GTCAGCTAAGATGGCCGCA 60.153 57.895 0.00 0.00 0.00 5.69
1192 1878 2.203126 GCTAAGATGGCCGCAGCT 60.203 61.111 0.00 0.00 39.73 4.24
1255 1941 2.284625 ACGCTCCTCCACCATGGA 60.285 61.111 21.47 0.00 45.98 3.41
1270 1956 1.270826 CATGGACTAGTCATCGCCGAT 59.729 52.381 23.91 0.00 0.00 4.18
1321 2013 2.443016 AAGCTCCTCCTCGCCGAT 60.443 61.111 0.00 0.00 0.00 4.18
1450 2142 2.347490 GTCACCGGCATCACCACT 59.653 61.111 0.00 0.00 39.03 4.00
1456 2148 2.683859 CGGCATCACCACTGTGCTG 61.684 63.158 1.29 0.00 42.46 4.41
1621 2322 3.270027 GGATGTGTTGTTCGATGATGGA 58.730 45.455 0.00 0.00 0.00 3.41
1718 2429 4.276678 CCATGTATCGCCATCAAATGAACT 59.723 41.667 0.00 0.00 0.00 3.01
1800 2511 1.162800 CGCTGGCTTAATGGCTCCTC 61.163 60.000 0.00 0.00 42.34 3.71
1816 2527 2.632028 CTCCTCGAATCCTGACCATCAT 59.368 50.000 0.00 0.00 0.00 2.45
1904 2615 4.796231 CGGACAAGGGGCTCGTCG 62.796 72.222 0.00 0.00 0.00 5.12
1975 2686 2.808958 CGCCGCGTCCAATTGTAGG 61.809 63.158 4.92 0.00 0.00 3.18
2075 2789 0.918983 GGTGGAGATTCCCATGGTCA 59.081 55.000 11.73 0.00 38.66 4.02
2078 2792 2.173356 GTGGAGATTCCCATGGTCATCA 59.827 50.000 18.31 7.33 38.66 3.07
2369 3114 2.350804 GAGTGCGACGATACTGTGACTA 59.649 50.000 9.50 0.00 0.00 2.59
2434 3179 4.422073 TGGAGATATTGTCATTCGCCTT 57.578 40.909 0.00 0.00 31.43 4.35
2498 3250 5.163561 CCACAAGGCAACAAGAAAAAGAGTA 60.164 40.000 0.00 0.00 41.41 2.59
2506 3258 3.314357 ACAAGAAAAAGAGTACCGTTGCC 59.686 43.478 0.00 0.00 0.00 4.52
2509 3261 0.533308 AAAAGAGTACCGTTGCCGCA 60.533 50.000 0.00 0.00 0.00 5.69
2557 3309 4.849813 TGACCTTCTCAATGATGGACAT 57.150 40.909 4.88 0.00 41.13 3.06
2642 3398 6.722129 ACTCTACTAGTCACTTCTTGTTGGAT 59.278 38.462 0.00 0.00 30.33 3.41
2648 3404 5.230942 AGTCACTTCTTGTTGGATTCTACG 58.769 41.667 0.00 0.00 0.00 3.51
2649 3405 4.389077 GTCACTTCTTGTTGGATTCTACGG 59.611 45.833 0.00 0.00 0.00 4.02
2650 3406 4.282449 TCACTTCTTGTTGGATTCTACGGA 59.718 41.667 0.00 0.00 0.00 4.69
2651 3407 5.046591 TCACTTCTTGTTGGATTCTACGGAT 60.047 40.000 0.00 0.00 0.00 4.18
2652 3408 5.063944 CACTTCTTGTTGGATTCTACGGATG 59.936 44.000 0.00 0.00 0.00 3.51
2653 3409 4.137116 TCTTGTTGGATTCTACGGATGG 57.863 45.455 0.00 0.00 0.00 3.51
2654 3410 3.517901 TCTTGTTGGATTCTACGGATGGT 59.482 43.478 0.00 0.00 0.00 3.55
2681 3437 6.036517 ACACATTAGCTGTTTTCGATCTGATC 59.963 38.462 7.60 7.60 35.29 2.92
2732 3497 1.034356 TTGTTGTCGTCGAGGAGGAA 58.966 50.000 8.30 1.82 0.00 3.36
2833 3598 7.417570 GGCTATGGCTAACACGGTATATATCTT 60.418 40.741 0.00 0.00 38.73 2.40
3232 4044 1.665679 CTGTGCCCACATACGATGAAC 59.334 52.381 1.04 0.00 41.01 3.18
3377 4193 3.838244 AGCTTGACACCACAGACTAAA 57.162 42.857 0.00 0.00 0.00 1.85
3589 4407 2.029623 GGATCATTGCCTTGCATGACT 58.970 47.619 0.00 0.00 38.76 3.41
3636 4454 6.823286 TGAAAAGGAAAGGGAAGGAAAATT 57.177 33.333 0.00 0.00 0.00 1.82
3678 4497 5.740099 TGTCGAAAAAGAAACGAAAATGTCC 59.260 36.000 0.00 0.00 37.77 4.02
3679 4498 5.740099 GTCGAAAAAGAAACGAAAATGTCCA 59.260 36.000 0.00 0.00 37.77 4.02
3680 4499 6.416750 GTCGAAAAAGAAACGAAAATGTCCAT 59.583 34.615 0.00 0.00 37.77 3.41
3681 4500 6.635239 TCGAAAAAGAAACGAAAATGTCCATC 59.365 34.615 0.00 0.00 33.20 3.51
3682 4501 6.636850 CGAAAAAGAAACGAAAATGTCCATCT 59.363 34.615 0.00 0.00 0.00 2.90
3683 4502 7.167468 CGAAAAAGAAACGAAAATGTCCATCTT 59.833 33.333 0.00 0.00 0.00 2.40
3684 4503 7.698836 AAAAGAAACGAAAATGTCCATCTTG 57.301 32.000 0.00 0.00 0.00 3.02
3685 4504 6.391227 AAGAAACGAAAATGTCCATCTTGT 57.609 33.333 0.00 0.00 0.00 3.16
3686 4505 5.762045 AGAAACGAAAATGTCCATCTTGTG 58.238 37.500 0.00 0.00 0.00 3.33
3687 4506 5.299279 AGAAACGAAAATGTCCATCTTGTGT 59.701 36.000 0.00 0.00 0.00 3.72
3688 4507 4.488126 ACGAAAATGTCCATCTTGTGTG 57.512 40.909 0.00 0.00 0.00 3.82
3689 4508 3.253188 ACGAAAATGTCCATCTTGTGTGG 59.747 43.478 0.00 0.00 38.11 4.17
3690 4509 3.253188 CGAAAATGTCCATCTTGTGTGGT 59.747 43.478 0.00 0.00 37.96 4.16
3691 4510 4.261572 CGAAAATGTCCATCTTGTGTGGTT 60.262 41.667 0.00 0.00 37.96 3.67
3692 4511 5.600696 GAAAATGTCCATCTTGTGTGGTTT 58.399 37.500 0.00 0.00 37.96 3.27
3693 4512 4.589216 AATGTCCATCTTGTGTGGTTTG 57.411 40.909 0.00 0.00 37.96 2.93
3694 4513 3.011566 TGTCCATCTTGTGTGGTTTGT 57.988 42.857 0.00 0.00 37.96 2.83
3695 4514 2.687425 TGTCCATCTTGTGTGGTTTGTG 59.313 45.455 0.00 0.00 37.96 3.33
3696 4515 2.687935 GTCCATCTTGTGTGGTTTGTGT 59.312 45.455 0.00 0.00 37.96 3.72
3697 4516 3.880490 GTCCATCTTGTGTGGTTTGTGTA 59.120 43.478 0.00 0.00 37.96 2.90
3698 4517 4.024048 GTCCATCTTGTGTGGTTTGTGTAG 60.024 45.833 0.00 0.00 37.96 2.74
3699 4518 3.882888 CCATCTTGTGTGGTTTGTGTAGT 59.117 43.478 0.00 0.00 31.96 2.73
3700 4519 4.338118 CCATCTTGTGTGGTTTGTGTAGTT 59.662 41.667 0.00 0.00 31.96 2.24
3701 4520 5.163561 CCATCTTGTGTGGTTTGTGTAGTTT 60.164 40.000 0.00 0.00 31.96 2.66
3702 4521 5.968528 TCTTGTGTGGTTTGTGTAGTTTT 57.031 34.783 0.00 0.00 0.00 2.43
3703 4522 6.334102 TCTTGTGTGGTTTGTGTAGTTTTT 57.666 33.333 0.00 0.00 0.00 1.94
3769 4588 6.174049 GGGTCTTGTCTAGTTCAGCTATTTT 58.826 40.000 0.00 0.00 0.00 1.82
3783 4602 8.699749 GTTCAGCTATTTTAACATTTTGTCCAC 58.300 33.333 0.00 0.00 0.00 4.02
3813 4632 3.429492 TCTTAAGGGCATGCATGTTTCA 58.571 40.909 26.79 10.49 0.00 2.69
3814 4633 3.193267 TCTTAAGGGCATGCATGTTTCAC 59.807 43.478 26.79 12.40 0.00 3.18
3851 4670 1.995376 CCAACTAACCTTGGGCAAGT 58.005 50.000 0.00 0.00 37.62 3.16
3857 4676 0.755327 AACCTTGGGCAAGTGTGGTC 60.755 55.000 0.00 0.00 36.72 4.02
3859 4678 0.400213 CCTTGGGCAAGTGTGGTCTA 59.600 55.000 0.00 0.00 36.72 2.59
3871 4690 6.265577 CAAGTGTGGTCTAGAAAAAGTTTGG 58.734 40.000 0.00 0.00 0.00 3.28
3884 4703 7.147976 AGAAAAAGTTTGGCTCATTGATACAC 58.852 34.615 0.00 0.00 0.00 2.90
3885 4704 6.403866 AAAAGTTTGGCTCATTGATACACA 57.596 33.333 0.00 0.00 0.00 3.72
3886 4705 5.376854 AAGTTTGGCTCATTGATACACAC 57.623 39.130 0.00 0.00 0.00 3.82
3887 4706 4.655963 AGTTTGGCTCATTGATACACACT 58.344 39.130 4.59 4.59 0.00 3.55
3888 4707 4.456911 AGTTTGGCTCATTGATACACACTG 59.543 41.667 8.06 0.00 0.00 3.66
3889 4708 2.989909 TGGCTCATTGATACACACTGG 58.010 47.619 0.00 0.00 31.43 4.00
3890 4709 2.571202 TGGCTCATTGATACACACTGGA 59.429 45.455 0.00 0.00 31.43 3.86
3891 4710 3.201290 GGCTCATTGATACACACTGGAG 58.799 50.000 0.00 0.00 31.43 3.86
3892 4711 3.369892 GGCTCATTGATACACACTGGAGT 60.370 47.826 0.00 0.00 31.43 3.85
3893 4712 4.141937 GGCTCATTGATACACACTGGAGTA 60.142 45.833 0.00 0.00 31.43 2.59
3894 4713 5.453903 GGCTCATTGATACACACTGGAGTAT 60.454 44.000 0.00 0.00 34.13 2.12
3895 4714 6.239317 GGCTCATTGATACACACTGGAGTATA 60.239 42.308 0.00 0.00 32.01 1.47
3896 4715 7.382110 GCTCATTGATACACACTGGAGTATAT 58.618 38.462 0.00 0.00 32.01 0.86
3897 4716 7.330454 GCTCATTGATACACACTGGAGTATATG 59.670 40.741 0.00 0.00 32.01 1.78
3898 4717 8.477419 TCATTGATACACACTGGAGTATATGA 57.523 34.615 0.00 0.00 32.01 2.15
3899 4718 8.360390 TCATTGATACACACTGGAGTATATGAC 58.640 37.037 0.00 0.00 32.01 3.06
3900 4719 7.654022 TTGATACACACTGGAGTATATGACA 57.346 36.000 0.00 0.00 32.01 3.58
3901 4720 7.654022 TGATACACACTGGAGTATATGACAA 57.346 36.000 0.00 0.00 32.01 3.18
3902 4721 7.716612 TGATACACACTGGAGTATATGACAAG 58.283 38.462 0.00 0.00 32.01 3.16
3903 4722 7.559897 TGATACACACTGGAGTATATGACAAGA 59.440 37.037 0.00 0.00 32.01 3.02
3904 4723 6.214191 ACACACTGGAGTATATGACAAGAG 57.786 41.667 0.00 0.00 0.00 2.85
3905 4724 5.952347 ACACACTGGAGTATATGACAAGAGA 59.048 40.000 0.00 0.00 0.00 3.10
3906 4725 6.437477 ACACACTGGAGTATATGACAAGAGAA 59.563 38.462 0.00 0.00 0.00 2.87
3907 4726 7.039011 ACACACTGGAGTATATGACAAGAGAAA 60.039 37.037 0.00 0.00 0.00 2.52
3908 4727 7.490725 CACACTGGAGTATATGACAAGAGAAAG 59.509 40.741 0.00 0.00 0.00 2.62
3909 4728 6.983307 CACTGGAGTATATGACAAGAGAAAGG 59.017 42.308 0.00 0.00 0.00 3.11
3910 4729 6.897966 ACTGGAGTATATGACAAGAGAAAGGA 59.102 38.462 0.00 0.00 0.00 3.36
3911 4730 7.400339 ACTGGAGTATATGACAAGAGAAAGGAA 59.600 37.037 0.00 0.00 0.00 3.36
3912 4731 7.786030 TGGAGTATATGACAAGAGAAAGGAAG 58.214 38.462 0.00 0.00 0.00 3.46
3913 4732 7.147655 TGGAGTATATGACAAGAGAAAGGAAGG 60.148 40.741 0.00 0.00 0.00 3.46
3914 4733 7.070074 GGAGTATATGACAAGAGAAAGGAAGGA 59.930 40.741 0.00 0.00 0.00 3.36
3915 4734 8.380742 AGTATATGACAAGAGAAAGGAAGGAA 57.619 34.615 0.00 0.00 0.00 3.36
3916 4735 8.826765 AGTATATGACAAGAGAAAGGAAGGAAA 58.173 33.333 0.00 0.00 0.00 3.13
3917 4736 9.449719 GTATATGACAAGAGAAAGGAAGGAAAA 57.550 33.333 0.00 0.00 0.00 2.29
3919 4738 6.884280 TGACAAGAGAAAGGAAGGAAAATC 57.116 37.500 0.00 0.00 0.00 2.17
3920 4739 5.770162 TGACAAGAGAAAGGAAGGAAAATCC 59.230 40.000 0.00 0.00 36.58 3.01
3921 4740 5.080337 ACAAGAGAAAGGAAGGAAAATCCC 58.920 41.667 0.00 0.00 37.19 3.85
3922 4741 3.956744 AGAGAAAGGAAGGAAAATCCCG 58.043 45.455 0.00 0.00 37.19 5.14
3923 4742 3.017442 GAGAAAGGAAGGAAAATCCCGG 58.983 50.000 0.00 0.00 37.19 5.73
3924 4743 2.100197 GAAAGGAAGGAAAATCCCGGG 58.900 52.381 16.85 16.85 37.19 5.73
3925 4744 1.081481 AAGGAAGGAAAATCCCGGGT 58.919 50.000 22.86 4.84 37.19 5.28
3926 4745 1.081481 AGGAAGGAAAATCCCGGGTT 58.919 50.000 22.86 9.98 37.19 4.11
3927 4746 2.281034 AGGAAGGAAAATCCCGGGTTA 58.719 47.619 22.86 1.03 37.19 2.85
3928 4747 2.650827 AGGAAGGAAAATCCCGGGTTAA 59.349 45.455 22.86 0.06 37.19 2.01
3929 4748 2.756760 GGAAGGAAAATCCCGGGTTAAC 59.243 50.000 22.86 9.50 37.19 2.01
3930 4749 3.423749 GAAGGAAAATCCCGGGTTAACA 58.576 45.455 22.86 0.00 37.19 2.41
3931 4750 3.750501 AGGAAAATCCCGGGTTAACAT 57.249 42.857 22.86 2.34 37.19 2.71
3932 4751 4.055710 AGGAAAATCCCGGGTTAACATT 57.944 40.909 22.86 9.70 37.19 2.71
3933 4752 4.021229 AGGAAAATCCCGGGTTAACATTC 58.979 43.478 22.86 16.20 37.19 2.67
4298 5117 5.016245 TCCCCAAAGATCTTCTTTTACCCAT 59.984 40.000 8.78 0.00 43.62 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.079253 GACTGTCCAGGGCAAATTAAGAA 58.921 43.478 0.00 0.00 0.00 2.52
34 35 2.556559 GGGACTGTCCAGGGCAAATTAA 60.557 50.000 26.94 0.00 38.64 1.40
41 42 1.566298 AAGATGGGACTGTCCAGGGC 61.566 60.000 26.94 13.34 40.56 5.19
108 109 1.852157 TCCCCATTCCAGCACCACT 60.852 57.895 0.00 0.00 0.00 4.00
122 123 1.381327 TCACCGGATCTCAGTCCCC 60.381 63.158 9.46 0.00 34.67 4.81
123 124 0.684805 AGTCACCGGATCTCAGTCCC 60.685 60.000 9.46 0.00 34.67 4.46
124 125 1.134965 CAAGTCACCGGATCTCAGTCC 60.135 57.143 9.46 0.00 34.82 3.85
125 126 1.737363 GCAAGTCACCGGATCTCAGTC 60.737 57.143 9.46 0.00 0.00 3.51
126 127 0.247736 GCAAGTCACCGGATCTCAGT 59.752 55.000 9.46 0.00 0.00 3.41
127 128 0.534412 AGCAAGTCACCGGATCTCAG 59.466 55.000 9.46 1.33 0.00 3.35
128 129 0.247460 CAGCAAGTCACCGGATCTCA 59.753 55.000 9.46 0.00 0.00 3.27
129 130 0.247736 ACAGCAAGTCACCGGATCTC 59.752 55.000 9.46 0.00 0.00 2.75
130 131 0.036952 CACAGCAAGTCACCGGATCT 60.037 55.000 9.46 0.00 0.00 2.75
131 132 1.021390 CCACAGCAAGTCACCGGATC 61.021 60.000 9.46 0.00 0.00 3.36
132 133 1.003355 CCACAGCAAGTCACCGGAT 60.003 57.895 9.46 0.00 0.00 4.18
133 134 2.137528 TCCACAGCAAGTCACCGGA 61.138 57.895 9.46 0.00 0.00 5.14
134 135 1.961277 GTCCACAGCAAGTCACCGG 60.961 63.158 0.00 0.00 0.00 5.28
135 136 0.813610 TTGTCCACAGCAAGTCACCG 60.814 55.000 0.00 0.00 0.00 4.94
136 137 0.947244 CTTGTCCACAGCAAGTCACC 59.053 55.000 0.00 0.00 38.68 4.02
141 142 1.531149 CGGTTACTTGTCCACAGCAAG 59.469 52.381 3.81 3.81 46.23 4.01
142 143 1.588674 CGGTTACTTGTCCACAGCAA 58.411 50.000 0.00 0.00 0.00 3.91
143 144 0.250124 CCGGTTACTTGTCCACAGCA 60.250 55.000 0.00 0.00 0.00 4.41
144 145 0.250166 ACCGGTTACTTGTCCACAGC 60.250 55.000 0.00 0.00 0.00 4.40
145 146 1.069513 TCACCGGTTACTTGTCCACAG 59.930 52.381 2.97 0.00 0.00 3.66
146 147 1.121378 TCACCGGTTACTTGTCCACA 58.879 50.000 2.97 0.00 0.00 4.17
147 148 1.869132 GTTCACCGGTTACTTGTCCAC 59.131 52.381 2.97 0.00 0.00 4.02
148 149 1.485480 TGTTCACCGGTTACTTGTCCA 59.515 47.619 2.97 0.00 0.00 4.02
149 150 2.140717 CTGTTCACCGGTTACTTGTCC 58.859 52.381 2.97 0.00 0.00 4.02
150 151 2.830104 ACTGTTCACCGGTTACTTGTC 58.170 47.619 2.97 0.00 0.00 3.18
151 152 2.994186 ACTGTTCACCGGTTACTTGT 57.006 45.000 2.97 7.14 0.00 3.16
152 153 2.727798 CGTACTGTTCACCGGTTACTTG 59.272 50.000 2.97 6.51 33.63 3.16
153 154 2.288395 CCGTACTGTTCACCGGTTACTT 60.288 50.000 2.97 0.55 35.78 2.24
154 155 1.270550 CCGTACTGTTCACCGGTTACT 59.729 52.381 2.97 0.00 35.78 2.24
155 156 1.701704 CCGTACTGTTCACCGGTTAC 58.298 55.000 2.97 7.06 35.78 2.50
159 160 2.025418 GCACCGTACTGTTCACCGG 61.025 63.158 0.00 0.00 45.72 5.28
160 161 2.025418 GGCACCGTACTGTTCACCG 61.025 63.158 0.00 0.00 0.00 4.94
161 162 0.949105 CAGGCACCGTACTGTTCACC 60.949 60.000 0.00 0.00 0.00 4.02
162 163 0.949105 CCAGGCACCGTACTGTTCAC 60.949 60.000 0.00 0.00 32.90 3.18
163 164 1.369692 CCAGGCACCGTACTGTTCA 59.630 57.895 0.00 0.00 32.90 3.18
164 165 2.033194 GCCAGGCACCGTACTGTTC 61.033 63.158 6.55 0.00 32.90 3.18
165 166 2.032071 GCCAGGCACCGTACTGTT 59.968 61.111 6.55 0.00 32.90 3.16
166 167 4.016706 GGCCAGGCACCGTACTGT 62.017 66.667 15.19 0.00 32.90 3.55
167 168 4.778143 GGGCCAGGCACCGTACTG 62.778 72.222 15.19 0.00 34.54 2.74
174 175 4.432741 GAGAAGGGGGCCAGGCAC 62.433 72.222 15.19 10.34 0.00 5.01
178 179 3.787001 GTCGGAGAAGGGGGCCAG 61.787 72.222 4.39 0.00 39.69 4.85
179 180 4.332543 AGTCGGAGAAGGGGGCCA 62.333 66.667 4.39 0.00 39.69 5.36
180 181 3.787001 CAGTCGGAGAAGGGGGCC 61.787 72.222 0.00 0.00 39.69 5.80
181 182 3.003763 ACAGTCGGAGAAGGGGGC 61.004 66.667 0.00 0.00 39.69 5.80
182 183 2.711922 CGACAGTCGGAGAAGGGGG 61.712 68.421 15.64 0.00 39.69 5.40
183 184 2.885861 CGACAGTCGGAGAAGGGG 59.114 66.667 15.64 0.00 39.69 4.79
192 193 2.725490 CTGATCTTGATCCGACAGTCG 58.275 52.381 16.50 16.50 40.07 4.18
193 194 2.468831 GCTGATCTTGATCCGACAGTC 58.531 52.381 7.99 0.00 0.00 3.51
194 195 1.202348 CGCTGATCTTGATCCGACAGT 60.202 52.381 7.99 0.00 0.00 3.55
195 196 1.485397 CGCTGATCTTGATCCGACAG 58.515 55.000 7.99 0.00 0.00 3.51
196 197 0.103026 CCGCTGATCTTGATCCGACA 59.897 55.000 7.99 0.00 0.00 4.35
197 198 0.385751 TCCGCTGATCTTGATCCGAC 59.614 55.000 7.99 0.00 0.00 4.79
198 199 1.000171 CATCCGCTGATCTTGATCCGA 60.000 52.381 7.99 0.30 0.00 4.55
199 200 1.426423 CATCCGCTGATCTTGATCCG 58.574 55.000 7.99 3.36 0.00 4.18
200 201 1.345741 TCCATCCGCTGATCTTGATCC 59.654 52.381 7.99 0.00 0.00 3.36
201 202 2.686235 CTCCATCCGCTGATCTTGATC 58.314 52.381 3.82 3.82 0.00 2.92
202 203 1.270732 GCTCCATCCGCTGATCTTGAT 60.271 52.381 0.00 0.00 0.00 2.57
203 204 0.105593 GCTCCATCCGCTGATCTTGA 59.894 55.000 0.00 0.00 0.00 3.02
204 205 0.106335 AGCTCCATCCGCTGATCTTG 59.894 55.000 0.00 0.00 36.15 3.02
205 206 0.835941 AAGCTCCATCCGCTGATCTT 59.164 50.000 0.00 0.00 37.87 2.40
206 207 0.392336 GAAGCTCCATCCGCTGATCT 59.608 55.000 0.00 0.00 37.87 2.75
207 208 0.943359 CGAAGCTCCATCCGCTGATC 60.943 60.000 0.00 0.00 37.87 2.92
208 209 1.068753 CGAAGCTCCATCCGCTGAT 59.931 57.895 0.00 0.00 37.87 2.90
209 210 2.351244 ACGAAGCTCCATCCGCTGA 61.351 57.895 0.00 0.00 37.87 4.26
210 211 2.169789 CACGAAGCTCCATCCGCTG 61.170 63.158 0.00 0.00 37.87 5.18
211 212 1.888436 TTCACGAAGCTCCATCCGCT 61.888 55.000 0.00 0.00 39.94 5.52
212 213 1.447838 TTCACGAAGCTCCATCCGC 60.448 57.895 0.00 0.00 0.00 5.54
213 214 0.389817 TGTTCACGAAGCTCCATCCG 60.390 55.000 0.00 0.00 0.00 4.18
214 215 1.338200 ACTGTTCACGAAGCTCCATCC 60.338 52.381 0.00 0.00 0.00 3.51
215 216 2.086054 ACTGTTCACGAAGCTCCATC 57.914 50.000 0.00 0.00 0.00 3.51
216 217 2.353803 GGTACTGTTCACGAAGCTCCAT 60.354 50.000 0.00 0.00 0.00 3.41
217 218 1.000506 GGTACTGTTCACGAAGCTCCA 59.999 52.381 0.00 0.00 0.00 3.86
218 219 1.672145 GGGTACTGTTCACGAAGCTCC 60.672 57.143 0.00 0.00 0.00 4.70
219 220 1.672145 GGGGTACTGTTCACGAAGCTC 60.672 57.143 0.00 0.00 0.00 4.09
220 221 0.320697 GGGGTACTGTTCACGAAGCT 59.679 55.000 0.00 0.00 0.00 3.74
221 222 1.012486 CGGGGTACTGTTCACGAAGC 61.012 60.000 0.00 0.00 0.00 3.86
222 223 0.599558 TCGGGGTACTGTTCACGAAG 59.400 55.000 5.86 0.00 0.00 3.79
223 224 0.599558 CTCGGGGTACTGTTCACGAA 59.400 55.000 8.92 0.00 0.00 3.85
224 225 1.870055 GCTCGGGGTACTGTTCACGA 61.870 60.000 7.69 7.69 0.00 4.35
225 226 1.445582 GCTCGGGGTACTGTTCACG 60.446 63.158 0.00 0.11 0.00 4.35
226 227 1.135170 GTAGCTCGGGGTACTGTTCAC 60.135 57.143 17.30 0.00 41.57 3.18
227 228 1.180029 GTAGCTCGGGGTACTGTTCA 58.820 55.000 17.30 0.00 41.57 3.18
228 229 1.134560 CTGTAGCTCGGGGTACTGTTC 59.865 57.143 24.01 0.00 44.13 3.18
229 230 1.183549 CTGTAGCTCGGGGTACTGTT 58.816 55.000 24.01 0.00 44.13 3.16
230 231 0.039326 ACTGTAGCTCGGGGTACTGT 59.961 55.000 25.75 25.75 46.19 3.55
231 232 0.456221 CACTGTAGCTCGGGGTACTG 59.544 60.000 24.59 24.59 44.13 2.74
232 233 0.683504 CCACTGTAGCTCGGGGTACT 60.684 60.000 24.01 3.36 44.13 2.73
233 234 0.969409 ACCACTGTAGCTCGGGGTAC 60.969 60.000 17.71 17.71 44.08 3.34
234 235 0.682209 GACCACTGTAGCTCGGGGTA 60.682 60.000 4.66 0.00 0.00 3.69
235 236 1.982938 GACCACTGTAGCTCGGGGT 60.983 63.158 4.34 4.34 0.00 4.95
236 237 2.722201 GGACCACTGTAGCTCGGGG 61.722 68.421 0.00 0.00 0.00 5.73
237 238 2.893398 GGACCACTGTAGCTCGGG 59.107 66.667 0.00 0.00 0.00 5.14
238 239 2.267681 GACGGACCACTGTAGCTCGG 62.268 65.000 0.00 0.00 35.56 4.63
239 240 1.136984 GACGGACCACTGTAGCTCG 59.863 63.158 0.00 0.00 35.56 5.03
240 241 1.401199 GTAGACGGACCACTGTAGCTC 59.599 57.143 0.00 0.00 35.56 4.09
241 242 1.271762 TGTAGACGGACCACTGTAGCT 60.272 52.381 0.00 0.00 35.56 3.32
242 243 1.132643 CTGTAGACGGACCACTGTAGC 59.867 57.143 0.00 0.00 35.56 3.58
243 244 1.743958 CCTGTAGACGGACCACTGTAG 59.256 57.143 0.00 0.00 35.56 2.74
244 245 1.352017 TCCTGTAGACGGACCACTGTA 59.648 52.381 0.00 0.00 35.56 2.74
245 246 0.111832 TCCTGTAGACGGACCACTGT 59.888 55.000 0.00 0.00 38.45 3.55
246 247 1.067776 GTTCCTGTAGACGGACCACTG 60.068 57.143 0.00 0.00 0.00 3.66
247 248 1.203025 AGTTCCTGTAGACGGACCACT 60.203 52.381 0.00 0.00 0.00 4.00
248 249 1.254954 AGTTCCTGTAGACGGACCAC 58.745 55.000 0.00 0.00 0.00 4.16
249 250 1.616865 CAAGTTCCTGTAGACGGACCA 59.383 52.381 0.00 0.00 0.00 4.02
250 251 1.617357 ACAAGTTCCTGTAGACGGACC 59.383 52.381 0.00 0.00 0.00 4.46
251 252 4.715527 ATACAAGTTCCTGTAGACGGAC 57.284 45.455 0.00 0.00 35.32 4.79
252 253 5.356190 CAGTATACAAGTTCCTGTAGACGGA 59.644 44.000 5.50 0.00 44.81 4.69
253 254 5.579718 CAGTATACAAGTTCCTGTAGACGG 58.420 45.833 5.50 0.10 44.81 4.79
254 255 5.035443 GCAGTATACAAGTTCCTGTAGACG 58.965 45.833 5.50 0.00 44.81 4.18
255 256 5.035443 CGCAGTATACAAGTTCCTGTAGAC 58.965 45.833 5.50 1.29 41.97 2.59
256 257 4.097437 CCGCAGTATACAAGTTCCTGTAGA 59.903 45.833 5.50 0.00 35.32 2.59
257 258 4.097437 TCCGCAGTATACAAGTTCCTGTAG 59.903 45.833 5.50 0.00 35.32 2.74
258 259 4.018490 TCCGCAGTATACAAGTTCCTGTA 58.982 43.478 5.50 0.00 36.27 2.74
259 260 2.829720 TCCGCAGTATACAAGTTCCTGT 59.170 45.455 5.50 0.00 0.00 4.00
260 261 3.187700 GTCCGCAGTATACAAGTTCCTG 58.812 50.000 5.50 0.00 0.00 3.86
261 262 2.159282 CGTCCGCAGTATACAAGTTCCT 60.159 50.000 5.50 0.00 0.00 3.36
262 263 2.159338 TCGTCCGCAGTATACAAGTTCC 60.159 50.000 5.50 0.00 0.00 3.62
263 264 3.106672 CTCGTCCGCAGTATACAAGTTC 58.893 50.000 5.50 0.00 0.00 3.01
264 265 2.734492 GCTCGTCCGCAGTATACAAGTT 60.734 50.000 5.50 0.00 0.00 2.66
265 266 1.202268 GCTCGTCCGCAGTATACAAGT 60.202 52.381 5.50 0.00 0.00 3.16
266 267 1.065701 AGCTCGTCCGCAGTATACAAG 59.934 52.381 5.50 0.00 0.00 3.16
267 268 1.100510 AGCTCGTCCGCAGTATACAA 58.899 50.000 5.50 0.00 0.00 2.41
268 269 1.600957 GTAGCTCGTCCGCAGTATACA 59.399 52.381 5.50 0.00 0.00 2.29
269 270 1.600957 TGTAGCTCGTCCGCAGTATAC 59.399 52.381 0.00 0.00 0.00 1.47
270 271 1.871676 CTGTAGCTCGTCCGCAGTATA 59.128 52.381 0.00 0.00 0.00 1.47
271 272 0.663688 CTGTAGCTCGTCCGCAGTAT 59.336 55.000 0.00 0.00 0.00 2.12
272 273 0.675837 ACTGTAGCTCGTCCGCAGTA 60.676 55.000 0.00 0.00 38.46 2.74
273 274 1.972223 ACTGTAGCTCGTCCGCAGT 60.972 57.895 0.00 0.00 35.81 4.40
274 275 1.515088 CACTGTAGCTCGTCCGCAG 60.515 63.158 0.00 0.00 0.00 5.18
275 276 1.313091 ATCACTGTAGCTCGTCCGCA 61.313 55.000 0.00 0.00 0.00 5.69
276 277 0.179134 AATCACTGTAGCTCGTCCGC 60.179 55.000 0.00 0.00 0.00 5.54
277 278 1.828832 GAATCACTGTAGCTCGTCCG 58.171 55.000 0.00 0.00 0.00 4.79
278 279 1.828832 CGAATCACTGTAGCTCGTCC 58.171 55.000 0.00 0.00 0.00 4.79
279 280 1.192793 GCGAATCACTGTAGCTCGTC 58.807 55.000 0.00 0.00 32.23 4.20
280 281 0.526211 TGCGAATCACTGTAGCTCGT 59.474 50.000 0.00 0.00 32.23 4.18
281 282 1.845266 ATGCGAATCACTGTAGCTCG 58.155 50.000 0.00 0.00 0.00 5.03
282 283 3.706698 TGTATGCGAATCACTGTAGCTC 58.293 45.455 0.00 0.00 0.00 4.09
283 284 3.131223 ACTGTATGCGAATCACTGTAGCT 59.869 43.478 0.00 0.00 0.00 3.32
284 285 3.448686 ACTGTATGCGAATCACTGTAGC 58.551 45.455 0.00 0.00 0.00 3.58
285 286 4.976731 GGTACTGTATGCGAATCACTGTAG 59.023 45.833 0.00 0.00 30.40 2.74
286 287 4.496840 CGGTACTGTATGCGAATCACTGTA 60.497 45.833 0.00 0.00 0.00 2.74
287 288 3.733988 CGGTACTGTATGCGAATCACTGT 60.734 47.826 0.00 0.00 0.00 3.55
288 289 2.789339 CGGTACTGTATGCGAATCACTG 59.211 50.000 0.00 0.00 0.00 3.66
289 290 2.223735 CCGGTACTGTATGCGAATCACT 60.224 50.000 0.00 0.00 0.00 3.41
290 291 2.124903 CCGGTACTGTATGCGAATCAC 58.875 52.381 0.00 0.00 0.00 3.06
291 292 1.537348 GCCGGTACTGTATGCGAATCA 60.537 52.381 1.90 0.00 0.00 2.57
292 293 1.137513 GCCGGTACTGTATGCGAATC 58.862 55.000 1.90 0.00 0.00 2.52
293 294 0.249741 GGCCGGTACTGTATGCGAAT 60.250 55.000 1.90 0.00 0.00 3.34
294 295 1.142314 GGCCGGTACTGTATGCGAA 59.858 57.895 1.90 0.00 0.00 4.70
295 296 2.053277 TGGCCGGTACTGTATGCGA 61.053 57.895 1.90 0.00 0.00 5.10
296 297 1.881252 GTGGCCGGTACTGTATGCG 60.881 63.158 1.90 0.00 0.00 4.73
297 298 1.523032 GGTGGCCGGTACTGTATGC 60.523 63.158 1.90 0.00 0.00 3.14
298 299 1.227147 CGGTGGCCGGTACTGTATG 60.227 63.158 1.90 0.00 44.15 2.39
299 300 3.213264 CGGTGGCCGGTACTGTAT 58.787 61.111 1.90 0.00 44.15 2.29
309 310 0.451783 CTAGCAAAATCACGGTGGCC 59.548 55.000 8.50 0.00 0.00 5.36
310 311 1.398390 CTCTAGCAAAATCACGGTGGC 59.602 52.381 8.50 3.23 0.00 5.01
311 312 1.398390 GCTCTAGCAAAATCACGGTGG 59.602 52.381 8.50 0.00 41.59 4.61
312 313 2.813779 GCTCTAGCAAAATCACGGTG 57.186 50.000 0.56 0.56 41.59 4.94
324 325 1.938926 GCCCAGATCGAATGCTCTAGC 60.939 57.143 0.00 0.00 42.50 3.42
325 326 1.617850 AGCCCAGATCGAATGCTCTAG 59.382 52.381 0.00 0.00 0.00 2.43
326 327 1.342496 CAGCCCAGATCGAATGCTCTA 59.658 52.381 0.00 0.00 0.00 2.43
327 328 0.106335 CAGCCCAGATCGAATGCTCT 59.894 55.000 0.00 0.00 0.00 4.09
328 329 1.505477 GCAGCCCAGATCGAATGCTC 61.505 60.000 0.00 0.00 0.00 4.26
329 330 1.525535 GCAGCCCAGATCGAATGCT 60.526 57.895 0.00 0.00 0.00 3.79
330 331 2.550101 GGCAGCCCAGATCGAATGC 61.550 63.158 0.00 3.74 0.00 3.56
331 332 1.895707 GGGCAGCCCAGATCGAATG 60.896 63.158 27.33 0.00 44.65 2.67
332 333 2.512896 GGGCAGCCCAGATCGAAT 59.487 61.111 27.33 0.00 44.65 3.34
341 342 3.504204 GATGGAGGATGGGCAGCCC 62.504 68.421 25.54 25.54 45.71 5.19
342 343 2.114838 GATGGAGGATGGGCAGCC 59.885 66.667 1.26 1.26 37.08 4.85
343 344 2.114838 GGATGGAGGATGGGCAGC 59.885 66.667 0.00 0.00 0.00 5.25
344 345 0.481567 ATTGGATGGAGGATGGGCAG 59.518 55.000 0.00 0.00 0.00 4.85
345 346 0.186630 CATTGGATGGAGGATGGGCA 59.813 55.000 0.00 0.00 0.00 5.36
346 347 3.047039 CATTGGATGGAGGATGGGC 57.953 57.895 0.00 0.00 0.00 5.36
360 361 3.291611 GCAGGAGGCCAACCATTG 58.708 61.111 18.84 11.39 39.06 2.82
378 379 3.475774 GCAGTCACGCCGTAACCG 61.476 66.667 0.00 0.00 0.00 4.44
379 380 3.116531 GGCAGTCACGCCGTAACC 61.117 66.667 0.00 0.00 43.52 2.85
394 395 3.618780 CCAGTGACTGGCCTCTGGC 62.619 68.421 20.01 0.00 45.13 4.85
395 396 2.667418 CCAGTGACTGGCCTCTGG 59.333 66.667 20.01 10.34 45.13 3.86
403 404 1.735038 CGCACAGAGATCCAGTGACTG 60.735 57.143 5.42 5.42 35.33 3.51
404 405 0.529833 CGCACAGAGATCCAGTGACT 59.470 55.000 12.40 0.00 35.33 3.41
405 406 1.080995 GCGCACAGAGATCCAGTGAC 61.081 60.000 0.30 4.79 35.33 3.67
406 407 1.216444 GCGCACAGAGATCCAGTGA 59.784 57.895 0.30 0.00 35.33 3.41
407 408 1.082679 CAGCGCACAGAGATCCAGTG 61.083 60.000 11.47 5.65 36.39 3.66
408 409 1.217511 CAGCGCACAGAGATCCAGT 59.782 57.895 11.47 0.00 0.00 4.00
409 410 1.521010 CCAGCGCACAGAGATCCAG 60.521 63.158 11.47 0.00 0.00 3.86
410 411 1.543944 TTCCAGCGCACAGAGATCCA 61.544 55.000 11.47 0.00 0.00 3.41
411 412 0.179062 ATTCCAGCGCACAGAGATCC 60.179 55.000 11.47 0.00 0.00 3.36
412 413 0.935898 CATTCCAGCGCACAGAGATC 59.064 55.000 11.47 0.00 0.00 2.75
413 414 0.463295 CCATTCCAGCGCACAGAGAT 60.463 55.000 11.47 0.00 0.00 2.75
414 415 1.078918 CCATTCCAGCGCACAGAGA 60.079 57.895 11.47 0.00 0.00 3.10
415 416 0.108186 TACCATTCCAGCGCACAGAG 60.108 55.000 11.47 0.00 0.00 3.35
416 417 0.391130 GTACCATTCCAGCGCACAGA 60.391 55.000 11.47 0.00 0.00 3.41
417 418 0.391661 AGTACCATTCCAGCGCACAG 60.392 55.000 11.47 0.00 0.00 3.66
418 419 0.036164 AAGTACCATTCCAGCGCACA 59.964 50.000 11.47 0.00 0.00 4.57
419 420 0.727398 GAAGTACCATTCCAGCGCAC 59.273 55.000 11.47 0.00 0.00 5.34
420 421 0.739462 CGAAGTACCATTCCAGCGCA 60.739 55.000 11.47 0.00 0.00 6.09
421 422 0.739813 ACGAAGTACCATTCCAGCGC 60.740 55.000 0.00 0.00 41.94 5.92
422 423 0.999406 CACGAAGTACCATTCCAGCG 59.001 55.000 0.00 0.00 41.61 5.18
423 424 2.380084 TCACGAAGTACCATTCCAGC 57.620 50.000 0.00 0.00 41.61 4.85
424 425 4.123497 TGATCACGAAGTACCATTCCAG 57.877 45.455 0.00 0.00 41.61 3.86
425 426 4.753516 ATGATCACGAAGTACCATTCCA 57.246 40.909 0.00 0.00 41.61 3.53
426 427 5.220854 CCAAATGATCACGAAGTACCATTCC 60.221 44.000 0.00 0.00 41.61 3.01
427 428 5.220854 CCCAAATGATCACGAAGTACCATTC 60.221 44.000 0.00 0.00 41.61 2.67
428 429 4.640201 CCCAAATGATCACGAAGTACCATT 59.360 41.667 0.00 0.00 41.61 3.16
429 430 4.080582 TCCCAAATGATCACGAAGTACCAT 60.081 41.667 0.00 0.00 41.61 3.55
430 431 3.262151 TCCCAAATGATCACGAAGTACCA 59.738 43.478 0.00 0.00 41.61 3.25
475 786 4.199310 GTCATAGCAAAAGGGCAGATGTA 58.801 43.478 0.00 0.00 33.55 2.29
545 856 1.664151 GGTAACGTACTCCATTGCAGC 59.336 52.381 0.00 0.00 0.00 5.25
578 889 2.851195 ACACCCTGTTGACAATCTGAC 58.149 47.619 0.00 0.00 0.00 3.51
589 900 2.158534 TGCACCATAGAAACACCCTGTT 60.159 45.455 0.00 0.00 43.41 3.16
590 901 1.423541 TGCACCATAGAAACACCCTGT 59.576 47.619 0.00 0.00 0.00 4.00
619 930 5.045872 GGGCATATTTTGATCTGTTGCTTC 58.954 41.667 0.00 0.00 0.00 3.86
712 1023 6.648725 CCGTATAGTGGCTAGCAATATTTC 57.351 41.667 18.24 0.00 0.00 2.17
733 1044 5.220854 CCACTAGTCCTATCAAAATTTGCCG 60.221 44.000 0.00 0.00 0.00 5.69
745 1056 1.141657 TCGTACGCCCACTAGTCCTAT 59.858 52.381 11.24 0.00 0.00 2.57
758 1069 1.080705 AAGCCAGACAGTCGTACGC 60.081 57.895 11.24 5.97 0.00 4.42
810 1432 5.801380 ACTGTAGGGATTACAATCACGTTT 58.199 37.500 4.45 0.00 43.60 3.60
906 1528 8.893727 GGTAATAATGCTCATGTAAGTTTGAGT 58.106 33.333 5.23 0.00 41.16 3.41
907 1529 8.892723 TGGTAATAATGCTCATGTAAGTTTGAG 58.107 33.333 0.00 0.00 41.84 3.02
908 1530 8.800370 TGGTAATAATGCTCATGTAAGTTTGA 57.200 30.769 0.00 0.00 0.00 2.69
910 1532 9.461312 TTCTGGTAATAATGCTCATGTAAGTTT 57.539 29.630 0.00 0.00 0.00 2.66
911 1533 9.461312 TTTCTGGTAATAATGCTCATGTAAGTT 57.539 29.630 0.00 0.00 0.00 2.66
913 1535 9.941664 CTTTTCTGGTAATAATGCTCATGTAAG 57.058 33.333 0.00 0.00 0.00 2.34
914 1536 8.902806 CCTTTTCTGGTAATAATGCTCATGTAA 58.097 33.333 0.00 0.00 0.00 2.41
915 1537 8.271458 TCCTTTTCTGGTAATAATGCTCATGTA 58.729 33.333 0.00 0.00 0.00 2.29
916 1538 7.118723 TCCTTTTCTGGTAATAATGCTCATGT 58.881 34.615 0.00 0.00 0.00 3.21
917 1539 7.572523 TCCTTTTCTGGTAATAATGCTCATG 57.427 36.000 0.00 0.00 0.00 3.07
918 1540 8.593945 TTTCCTTTTCTGGTAATAATGCTCAT 57.406 30.769 0.00 0.00 0.00 2.90
919 1541 8.415950 TTTTCCTTTTCTGGTAATAATGCTCA 57.584 30.769 0.00 0.00 0.00 4.26
920 1542 7.976175 CCTTTTCCTTTTCTGGTAATAATGCTC 59.024 37.037 0.00 0.00 0.00 4.26
921 1543 7.673926 TCCTTTTCCTTTTCTGGTAATAATGCT 59.326 33.333 0.00 0.00 0.00 3.79
923 1545 7.968405 CGTCCTTTTCCTTTTCTGGTAATAATG 59.032 37.037 0.00 0.00 0.00 1.90
924 1546 7.886446 TCGTCCTTTTCCTTTTCTGGTAATAAT 59.114 33.333 0.00 0.00 0.00 1.28
927 1549 5.627135 TCGTCCTTTTCCTTTTCTGGTAAT 58.373 37.500 0.00 0.00 0.00 1.89
928 1550 5.038651 TCGTCCTTTTCCTTTTCTGGTAA 57.961 39.130 0.00 0.00 0.00 2.85
929 1551 4.693042 TCGTCCTTTTCCTTTTCTGGTA 57.307 40.909 0.00 0.00 0.00 3.25
930 1552 3.570912 TCGTCCTTTTCCTTTTCTGGT 57.429 42.857 0.00 0.00 0.00 4.00
931 1553 4.082733 GGATTCGTCCTTTTCCTTTTCTGG 60.083 45.833 0.00 0.00 0.00 3.86
932 1554 4.378459 CGGATTCGTCCTTTTCCTTTTCTG 60.378 45.833 0.00 0.00 0.00 3.02
937 1559 1.450025 GCGGATTCGTCCTTTTCCTT 58.550 50.000 0.00 0.00 38.89 3.36
938 1560 0.392595 GGCGGATTCGTCCTTTTCCT 60.393 55.000 0.00 0.00 38.89 3.36
940 1562 0.446616 GTGGCGGATTCGTCCTTTTC 59.553 55.000 0.00 0.00 40.82 2.29
942 1564 1.376812 GGTGGCGGATTCGTCCTTT 60.377 57.895 0.00 0.00 40.82 3.11
956 1578 3.622166 ATGGTAAGTAACTTCGGGTGG 57.378 47.619 0.00 0.00 0.00 4.61
978 1600 2.394708 CTGTGCATAATCGGACTACGG 58.605 52.381 0.00 0.00 44.45 4.02
1008 1630 7.390996 GTCTGAGTAGGATTCGAATACCTATGA 59.609 40.741 25.70 20.32 38.33 2.15
1015 1637 5.009110 CAGCTGTCTGAGTAGGATTCGAATA 59.991 44.000 11.38 0.00 42.95 1.75
1047 1669 9.003658 GCATATAAATAGGCGAATAATAGGCAT 57.996 33.333 0.00 0.00 30.05 4.40
1059 1681 2.671396 GGGTCGTGCATATAAATAGGCG 59.329 50.000 0.00 0.00 42.48 5.52
1066 1688 1.414919 GACAGGGGGTCGTGCATATAA 59.585 52.381 0.00 0.00 36.65 0.98
1077 1699 1.133809 TTGCAAGCTAGACAGGGGGT 61.134 55.000 0.00 0.00 0.00 4.95
1078 1700 0.678048 GTTGCAAGCTAGACAGGGGG 60.678 60.000 0.00 0.00 0.00 5.40
1084 1706 0.790814 GGTCGTGTTGCAAGCTAGAC 59.209 55.000 0.00 7.52 0.00 2.59
1085 1707 0.666274 CGGTCGTGTTGCAAGCTAGA 60.666 55.000 0.00 0.00 0.00 2.43
1100 1727 2.101575 TGTATCGCGCTCACGGTC 59.898 61.111 5.56 0.00 40.57 4.79
1105 1732 2.277949 GCTCGTGTATCGCGCTCA 60.278 61.111 5.56 0.00 45.23 4.26
1109 1736 1.939785 GAGGTGCTCGTGTATCGCG 60.940 63.158 0.00 0.00 39.67 5.87
1119 1746 0.169009 GGATTGTTTGCGAGGTGCTC 59.831 55.000 0.00 0.00 46.63 4.26
1120 1747 0.537143 TGGATTGTTTGCGAGGTGCT 60.537 50.000 0.00 0.00 46.63 4.40
1132 1804 4.778534 CAGAGATTGCTTGTTGGATTGT 57.221 40.909 0.00 0.00 0.00 2.71
1189 1875 3.240134 AACGTCGTGGGATGCAGCT 62.240 57.895 0.22 0.00 32.12 4.24
1192 1878 1.666553 GTCAACGTCGTGGGATGCA 60.667 57.895 0.00 0.00 32.12 3.96
1255 1941 1.364171 GGCATCGGCGATGACTAGT 59.636 57.895 43.92 12.74 44.09 2.57
1270 1956 4.357947 GCAGAGTCGTGGTCGGCA 62.358 66.667 0.00 0.00 44.74 5.69
1450 2142 1.529010 CTTGGCAAGGTCCAGCACA 60.529 57.895 19.55 2.14 37.44 4.57
1456 2148 2.281484 TCGTGCTTGGCAAGGTCC 60.281 61.111 27.25 12.31 41.47 4.46
1531 2232 0.736325 CGAAGTCGCCGAGGTTGAAT 60.736 55.000 0.00 0.00 0.00 2.57
1621 2322 2.352032 GCTGACCCTACAGACCGCT 61.352 63.158 0.00 0.00 39.94 5.52
1718 2429 1.612442 CCCCGGGGTTGAAGAGAGA 60.612 63.158 33.25 0.00 0.00 3.10
1780 2491 2.189499 GGAGCCATTAAGCCAGCGG 61.189 63.158 0.00 0.00 0.00 5.52
1800 2511 4.081476 TGCCTATATGATGGTCAGGATTCG 60.081 45.833 0.00 0.00 0.00 3.34
1816 2527 2.093500 CACCTTGCTGACAGTGCCTATA 60.093 50.000 3.99 0.00 0.00 1.31
2049 2763 1.004745 TGGGAATCTCCACCTTTGCTC 59.995 52.381 0.00 0.00 38.64 4.26
2075 2789 0.611714 GAGGTACGGGTGTTGGTGAT 59.388 55.000 0.00 0.00 0.00 3.06
2078 2792 2.576832 CGGAGGTACGGGTGTTGGT 61.577 63.158 0.00 0.00 0.00 3.67
2125 2839 2.916716 CGTTGAACTTATGCCATGTTGC 59.083 45.455 0.00 0.00 0.00 4.17
2434 3179 1.191489 TGGTTGATCCTGACGGCAGA 61.191 55.000 23.07 6.33 45.17 4.26
2479 3228 3.564225 CGGTACTCTTTTTCTTGTTGCCT 59.436 43.478 0.00 0.00 0.00 4.75
2506 3258 1.881973 CCCACCCATGAAATATCTGCG 59.118 52.381 0.00 0.00 0.00 5.18
2509 3261 1.858910 TGCCCCACCCATGAAATATCT 59.141 47.619 0.00 0.00 0.00 1.98
2557 3309 1.150536 GCCCCACTTGACTTGGACA 59.849 57.895 0.00 0.00 36.02 4.02
2642 3398 5.128171 AGCTAATGTGTTACCATCCGTAGAA 59.872 40.000 0.00 0.00 0.00 2.10
2648 3404 5.897377 AAACAGCTAATGTGTTACCATCC 57.103 39.130 0.00 0.00 43.00 3.51
2649 3405 6.021596 CGAAAACAGCTAATGTGTTACCATC 58.978 40.000 0.00 0.00 43.00 3.51
2650 3406 5.703592 TCGAAAACAGCTAATGTGTTACCAT 59.296 36.000 0.00 0.00 43.00 3.55
2651 3407 5.057819 TCGAAAACAGCTAATGTGTTACCA 58.942 37.500 0.00 0.00 43.00 3.25
2652 3408 5.600908 TCGAAAACAGCTAATGTGTTACC 57.399 39.130 0.00 0.00 43.00 2.85
2653 3409 6.955963 CAGATCGAAAACAGCTAATGTGTTAC 59.044 38.462 0.00 0.00 43.00 2.50
2654 3410 6.871492 TCAGATCGAAAACAGCTAATGTGTTA 59.129 34.615 0.00 0.00 43.00 2.41
2658 3414 6.344500 AGATCAGATCGAAAACAGCTAATGT 58.656 36.000 4.67 0.00 46.97 2.71
2681 3437 2.674852 CAATACCTGCAGCACACACTAG 59.325 50.000 8.66 0.00 0.00 2.57
2732 3497 6.550938 TCATCCAACAGATCTGAATAGTGT 57.449 37.500 29.27 2.42 30.59 3.55
2833 3598 9.607988 TGTAGAAGTGAACAATGTTAGAAGAAA 57.392 29.630 0.00 0.00 0.00 2.52
2874 3642 3.624959 GCTAGGCCCTGGTTTAAGTTGAT 60.625 47.826 0.00 0.00 0.00 2.57
3089 3879 1.538047 GCTTGTCCTCTTCATTGCCA 58.462 50.000 0.00 0.00 0.00 4.92
3232 4044 2.385315 CGATGTATCACCACTAGTGCG 58.615 52.381 17.86 12.86 46.81 5.34
3250 4062 1.735973 CAGCATCGATGGTCTCCGA 59.264 57.895 26.38 0.00 36.17 4.55
3439 4255 3.010420 GCTAGTTTCAATCTCCACCACC 58.990 50.000 0.00 0.00 0.00 4.61
3545 4362 8.977412 TCCTCACATATTTAGAAGTACACATGA 58.023 33.333 0.00 0.00 0.00 3.07
3552 4369 9.494271 GCAATGATCCTCACATATTTAGAAGTA 57.506 33.333 0.00 0.00 0.00 2.24
3554 4371 7.664731 AGGCAATGATCCTCACATATTTAGAAG 59.335 37.037 0.00 0.00 0.00 2.85
3565 4383 1.466856 TGCAAGGCAATGATCCTCAC 58.533 50.000 0.00 0.00 34.76 3.51
3566 4384 2.028876 CATGCAAGGCAATGATCCTCA 58.971 47.619 0.00 0.00 43.62 3.86
3604 4422 8.854117 CCTTCCCTTTCCTTTTCATATATTCTG 58.146 37.037 0.00 0.00 0.00 3.02
3605 4423 8.791749 TCCTTCCCTTTCCTTTTCATATATTCT 58.208 33.333 0.00 0.00 0.00 2.40
3636 4454 2.882137 GACAAAGAATGTGAAACCGGGA 59.118 45.455 6.32 0.00 44.12 5.14
3678 4497 5.499139 AACTACACAAACCACACAAGATG 57.501 39.130 0.00 0.00 0.00 2.90
3679 4498 6.524101 AAAACTACACAAACCACACAAGAT 57.476 33.333 0.00 0.00 0.00 2.40
3680 4499 5.968528 AAAACTACACAAACCACACAAGA 57.031 34.783 0.00 0.00 0.00 3.02
3700 4519 9.862371 TTAACTGTGCAGAAACAATAAGAAAAA 57.138 25.926 6.17 0.00 0.00 1.94
3702 4521 9.677567 GATTAACTGTGCAGAAACAATAAGAAA 57.322 29.630 6.17 0.00 0.00 2.52
3703 4522 8.845227 TGATTAACTGTGCAGAAACAATAAGAA 58.155 29.630 6.17 0.00 0.00 2.52
3704 4523 8.389779 TGATTAACTGTGCAGAAACAATAAGA 57.610 30.769 6.17 0.00 0.00 2.10
3705 4524 9.630098 ATTGATTAACTGTGCAGAAACAATAAG 57.370 29.630 6.17 0.00 0.00 1.73
3718 4537 5.854866 CACAACAGCTGATTGATTAACTGTG 59.145 40.000 23.35 12.26 38.32 3.66
3719 4538 5.532406 ACACAACAGCTGATTGATTAACTGT 59.468 36.000 23.35 15.28 39.92 3.55
3722 4541 5.630680 CCAACACAACAGCTGATTGATTAAC 59.369 40.000 23.35 0.00 30.70 2.01
3783 4602 1.909700 TGCCCTTAAGAGCCAACAAG 58.090 50.000 6.51 0.00 0.00 3.16
3813 4632 4.650972 TGGGGCAAAGTTAGTTATGAGT 57.349 40.909 0.00 0.00 0.00 3.41
3814 4633 5.010282 AGTTGGGGCAAAGTTAGTTATGAG 58.990 41.667 0.00 0.00 0.00 2.90
3851 4670 4.532834 AGCCAAACTTTTTCTAGACCACA 58.467 39.130 0.00 0.00 0.00 4.17
3857 4676 8.514594 TGTATCAATGAGCCAAACTTTTTCTAG 58.485 33.333 0.00 0.00 0.00 2.43
3859 4678 7.147976 GTGTATCAATGAGCCAAACTTTTTCT 58.852 34.615 0.00 0.00 0.00 2.52
3871 4690 3.866651 ACTCCAGTGTGTATCAATGAGC 58.133 45.455 0.00 0.00 43.71 4.26
3884 4703 6.983307 CCTTTCTCTTGTCATATACTCCAGTG 59.017 42.308 0.00 0.00 0.00 3.66
3885 4704 6.897966 TCCTTTCTCTTGTCATATACTCCAGT 59.102 38.462 0.00 0.00 0.00 4.00
3886 4705 7.353414 TCCTTTCTCTTGTCATATACTCCAG 57.647 40.000 0.00 0.00 0.00 3.86
3887 4706 7.147655 CCTTCCTTTCTCTTGTCATATACTCCA 60.148 40.741 0.00 0.00 0.00 3.86
3888 4707 7.070074 TCCTTCCTTTCTCTTGTCATATACTCC 59.930 40.741 0.00 0.00 0.00 3.85
3889 4708 8.012957 TCCTTCCTTTCTCTTGTCATATACTC 57.987 38.462 0.00 0.00 0.00 2.59
3890 4709 7.979786 TCCTTCCTTTCTCTTGTCATATACT 57.020 36.000 0.00 0.00 0.00 2.12
3891 4710 9.449719 TTTTCCTTCCTTTCTCTTGTCATATAC 57.550 33.333 0.00 0.00 0.00 1.47
3893 4712 9.183368 GATTTTCCTTCCTTTCTCTTGTCATAT 57.817 33.333 0.00 0.00 0.00 1.78
3894 4713 7.611855 GGATTTTCCTTCCTTTCTCTTGTCATA 59.388 37.037 0.00 0.00 32.53 2.15
3895 4714 6.435591 GGATTTTCCTTCCTTTCTCTTGTCAT 59.564 38.462 0.00 0.00 32.53 3.06
3896 4715 5.770162 GGATTTTCCTTCCTTTCTCTTGTCA 59.230 40.000 0.00 0.00 32.53 3.58
3897 4716 5.184096 GGGATTTTCCTTCCTTTCTCTTGTC 59.816 44.000 0.00 0.00 36.57 3.18
3898 4717 5.080337 GGGATTTTCCTTCCTTTCTCTTGT 58.920 41.667 0.00 0.00 36.57 3.16
3899 4718 4.156739 CGGGATTTTCCTTCCTTTCTCTTG 59.843 45.833 0.00 0.00 36.57 3.02
3900 4719 4.336280 CGGGATTTTCCTTCCTTTCTCTT 58.664 43.478 0.00 0.00 36.57 2.85
3901 4720 3.308473 CCGGGATTTTCCTTCCTTTCTCT 60.308 47.826 0.00 0.00 36.57 3.10
3902 4721 3.017442 CCGGGATTTTCCTTCCTTTCTC 58.983 50.000 0.00 0.00 36.57 2.87
3903 4722 2.291605 CCCGGGATTTTCCTTCCTTTCT 60.292 50.000 18.48 0.00 36.57 2.52
3904 4723 2.100197 CCCGGGATTTTCCTTCCTTTC 58.900 52.381 18.48 0.00 36.57 2.62
3905 4724 1.431633 ACCCGGGATTTTCCTTCCTTT 59.568 47.619 32.02 0.00 36.57 3.11
3906 4725 1.081481 ACCCGGGATTTTCCTTCCTT 58.919 50.000 32.02 0.00 36.57 3.36
3907 4726 1.081481 AACCCGGGATTTTCCTTCCT 58.919 50.000 32.02 0.00 36.57 3.36
3908 4727 2.756760 GTTAACCCGGGATTTTCCTTCC 59.243 50.000 32.02 0.00 36.57 3.46
3909 4728 3.423749 TGTTAACCCGGGATTTTCCTTC 58.576 45.455 32.02 7.72 36.57 3.46
3910 4729 3.529216 TGTTAACCCGGGATTTTCCTT 57.471 42.857 32.02 11.98 36.57 3.36
3911 4730 3.750501 ATGTTAACCCGGGATTTTCCT 57.249 42.857 32.02 0.00 36.57 3.36
3912 4731 4.021229 AGAATGTTAACCCGGGATTTTCC 58.979 43.478 32.02 10.10 35.23 3.13
3913 4732 5.407502 CAAGAATGTTAACCCGGGATTTTC 58.592 41.667 32.02 19.19 0.00 2.29
3914 4733 4.221924 CCAAGAATGTTAACCCGGGATTTT 59.778 41.667 32.02 14.56 0.00 1.82
3915 4734 3.767131 CCAAGAATGTTAACCCGGGATTT 59.233 43.478 32.02 15.43 0.00 2.17
3916 4735 3.010808 TCCAAGAATGTTAACCCGGGATT 59.989 43.478 32.02 20.02 0.00 3.01
3917 4736 2.578940 TCCAAGAATGTTAACCCGGGAT 59.421 45.455 32.02 20.40 0.00 3.85
3918 4737 1.986631 TCCAAGAATGTTAACCCGGGA 59.013 47.619 32.02 3.67 0.00 5.14
3919 4738 2.089201 GTCCAAGAATGTTAACCCGGG 58.911 52.381 22.25 22.25 0.00 5.73
3920 4739 1.735571 CGTCCAAGAATGTTAACCCGG 59.264 52.381 2.48 0.00 0.00 5.73
3921 4740 1.129811 GCGTCCAAGAATGTTAACCCG 59.870 52.381 2.48 0.00 0.00 5.28
3922 4741 1.129811 CGCGTCCAAGAATGTTAACCC 59.870 52.381 2.48 0.00 0.00 4.11
3923 4742 1.802365 ACGCGTCCAAGAATGTTAACC 59.198 47.619 5.58 0.00 0.00 2.85
3924 4743 2.735134 AGACGCGTCCAAGAATGTTAAC 59.265 45.455 34.08 6.15 0.00 2.01
3925 4744 3.034721 AGACGCGTCCAAGAATGTTAA 57.965 42.857 34.08 0.00 0.00 2.01
3926 4745 2.736144 AGACGCGTCCAAGAATGTTA 57.264 45.000 34.08 0.00 0.00 2.41
3927 4746 2.607187 CTAGACGCGTCCAAGAATGTT 58.393 47.619 34.08 15.74 0.00 2.71
3928 4747 1.736032 GCTAGACGCGTCCAAGAATGT 60.736 52.381 34.08 16.48 0.00 2.71
3929 4748 0.924090 GCTAGACGCGTCCAAGAATG 59.076 55.000 34.08 17.08 0.00 2.67
3930 4749 3.347411 GCTAGACGCGTCCAAGAAT 57.653 52.632 34.08 17.97 0.00 2.40
3931 4750 4.883026 GCTAGACGCGTCCAAGAA 57.117 55.556 34.08 14.54 0.00 2.52
3996 4815 4.097218 GGGGGACAGGCAGTTTTC 57.903 61.111 0.00 0.00 0.00 2.29
4230 5049 4.672899 AGAGGAGAGAGAGCTTTTGTAGT 58.327 43.478 0.00 0.00 0.00 2.73
4298 5117 5.136828 TCCTTAGCAGACAACCATTTTTCA 58.863 37.500 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.