Multiple sequence alignment - TraesCS2B01G589600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G589600 chr2B 100.000 6229 0 0 1 6229 775837931 775844159 0.000000e+00 11503.0
1 TraesCS2B01G589600 chr2B 88.281 256 29 1 5502 5757 38060555 38060301 7.840000e-79 305.0
2 TraesCS2B01G589600 chr2B 91.753 194 15 1 1969 2161 114041880 114042073 1.030000e-67 268.0
3 TraesCS2B01G589600 chr2B 89.583 192 19 1 3408 3599 775840457 775840647 6.240000e-60 243.0
4 TraesCS2B01G589600 chr2B 89.583 192 19 1 2527 2717 775841338 775841529 6.240000e-60 243.0
5 TraesCS2B01G589600 chr2B 87.261 157 16 2 2921 3073 775839745 775839901 6.420000e-40 176.0
6 TraesCS2B01G589600 chr2B 87.261 157 16 2 1815 1971 775840851 775841003 6.420000e-40 176.0
7 TraesCS2B01G589600 chr2B 90.000 80 8 0 5830 5909 38060292 38060213 3.070000e-18 104.0
8 TraesCS2B01G589600 chr2B 88.750 80 9 0 5830 5909 674295748 674295669 1.430000e-16 99.0
9 TraesCS2B01G589600 chr2B 84.091 88 0 7 653 726 30230078 30230165 8.660000e-09 73.1
10 TraesCS2B01G589600 chr2D 97.251 2619 68 4 3133 5749 632466861 632469477 0.000000e+00 4434.0
11 TraesCS2B01G589600 chr2D 97.443 743 16 2 848 1590 632465957 632466696 0.000000e+00 1264.0
12 TraesCS2B01G589600 chr2D 98.230 452 3 2 5783 6229 632469465 632469916 0.000000e+00 785.0
13 TraesCS2B01G589600 chr2D 92.394 447 13 4 1 430 632464797 632465239 8.870000e-173 617.0
14 TraesCS2B01G589600 chr2D 90.625 192 17 1 2527 2717 632467136 632467327 2.880000e-63 254.0
15 TraesCS2B01G589600 chr2D 92.982 171 10 2 482 651 632465231 632465400 1.340000e-61 248.0
16 TraesCS2B01G589600 chr2D 87.719 171 21 0 2713 2883 632466694 632466864 3.810000e-47 200.0
17 TraesCS2B01G589600 chr2D 95.652 115 1 1 744 858 632465387 632465497 1.380000e-41 182.0
18 TraesCS2B01G589600 chr4D 79.454 623 84 23 5174 5773 470114618 470115219 9.730000e-108 401.0
19 TraesCS2B01G589600 chr4D 87.500 288 36 0 5502 5789 66003747 66004034 3.600000e-87 333.0
20 TraesCS2B01G589600 chr4D 85.621 306 43 1 5200 5505 66003363 66003667 2.800000e-83 320.0
21 TraesCS2B01G589600 chr4D 100.000 43 0 0 686 728 76602245 76602287 5.180000e-11 80.5
22 TraesCS2B01G589600 chr6B 88.672 256 27 2 5502 5757 471179099 471178846 1.690000e-80 311.0
23 TraesCS2B01G589600 chr6B 90.000 80 8 0 5830 5909 157567244 157567165 3.070000e-18 104.0
24 TraesCS2B01G589600 chr6B 90.000 80 8 0 5830 5909 471178837 471178758 3.070000e-18 104.0
25 TraesCS2B01G589600 chr6B 100.000 32 0 0 653 684 575936141 575936110 6.740000e-05 60.2
26 TraesCS2B01G589600 chr6B 100.000 30 0 0 655 684 133162012 133161983 8.720000e-04 56.5
27 TraesCS2B01G589600 chr7B 88.327 257 27 3 5502 5757 645515167 645514913 7.840000e-79 305.0
28 TraesCS2B01G589600 chr7B 88.750 80 9 0 5830 5909 149937733 149937654 1.430000e-16 99.0
29 TraesCS2B01G589600 chr7B 82.222 90 2 8 653 728 6858489 6858400 1.450000e-06 65.8
30 TraesCS2B01G589600 chr5B 88.327 257 27 3 5502 5757 394253627 394253881 7.840000e-79 305.0
31 TraesCS2B01G589600 chr5B 87.938 257 28 3 5502 5757 394256285 394256539 3.650000e-77 300.0
32 TraesCS2B01G589600 chr5B 84.247 146 18 5 2265 2408 266319466 266319324 3.030000e-28 137.0
33 TraesCS2B01G589600 chr5A 88.327 257 27 3 5502 5757 311019704 311019450 7.840000e-79 305.0
34 TraesCS2B01G589600 chr5A 100.000 44 0 0 685 728 689656909 689656952 1.440000e-11 82.4
35 TraesCS2B01G589600 chr5A 82.022 89 2 7 652 726 394443896 394443808 5.210000e-06 63.9
36 TraesCS2B01G589600 chr2A 87.984 258 28 3 5501 5757 628362882 628362627 1.010000e-77 302.0
37 TraesCS2B01G589600 chr2A 88.750 80 9 0 5830 5909 628362618 628362539 1.430000e-16 99.0
38 TraesCS2B01G589600 chr2A 83.696 92 1 5 651 728 133680013 133680104 2.410000e-09 75.0
39 TraesCS2B01G589600 chr6A 83.529 255 32 6 5755 6001 15362834 15363086 4.860000e-56 230.0
40 TraesCS2B01G589600 chr6A 94.828 58 2 1 655 711 584592634 584592691 8.600000e-14 89.8
41 TraesCS2B01G589600 chr1B 86.364 110 6 6 2305 2413 3211718 3211617 1.840000e-20 111.0
42 TraesCS2B01G589600 chr7A 88.750 80 9 0 5830 5909 439786112 439786033 1.430000e-16 99.0
43 TraesCS2B01G589600 chr6D 94.828 58 2 1 655 711 436420151 436420208 8.600000e-14 89.8
44 TraesCS2B01G589600 chr3A 96.296 54 1 1 433 486 553147676 553147728 3.090000e-13 87.9
45 TraesCS2B01G589600 chr1A 100.000 43 0 0 686 728 293707690 293707648 5.180000e-11 80.5
46 TraesCS2B01G589600 chr1A 100.000 43 0 0 686 728 387338422 387338464 5.180000e-11 80.5
47 TraesCS2B01G589600 chr1A 100.000 43 0 0 686 728 432954048 432954090 5.180000e-11 80.5
48 TraesCS2B01G589600 chr1A 100.000 43 0 0 686 728 471289467 471289509 5.180000e-11 80.5
49 TraesCS2B01G589600 chr1A 100.000 43 0 0 686 728 509009161 509009119 5.180000e-11 80.5
50 TraesCS2B01G589600 chrUn 81.111 90 3 9 653 728 87042863 87042774 6.740000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G589600 chr2B 775837931 775844159 6228 False 11503.0 11503 100.0000 1 6229 1 chr2B.!!$F3 6228
1 TraesCS2B01G589600 chr2B 775839745 775841529 1784 False 209.5 243 88.4220 1815 3599 4 chr2B.!!$F4 1784
2 TraesCS2B01G589600 chr2D 632464797 632469916 5119 False 998.0 4434 94.0370 1 6229 8 chr2D.!!$F1 6228
3 TraesCS2B01G589600 chr4D 470114618 470115219 601 False 401.0 401 79.4540 5174 5773 1 chr4D.!!$F2 599
4 TraesCS2B01G589600 chr4D 66003363 66004034 671 False 326.5 333 86.5605 5200 5789 2 chr4D.!!$F3 589
5 TraesCS2B01G589600 chr5B 394253627 394256539 2912 False 302.5 305 88.1325 5502 5757 2 chr5B.!!$F1 255

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
717 736 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.0 0.0 0.00 4.73 F
1661 2150 0.039180 TAGGAGTCTGTCTTGCGGGA 59.961 55.000 0.0 0.0 0.00 5.14 F
1694 2183 0.033090 GGTCGAAGAAGAACGGTGGT 59.967 55.000 0.0 0.0 39.69 4.16 F
1770 2259 0.101399 ATGGTCTGTCATCGTCTCGC 59.899 55.000 0.0 0.0 0.00 5.03 F
1796 2285 0.103554 AAGGGGGTTGGGTAGAGGTT 60.104 55.000 0.0 0.0 0.00 3.50 F
1797 2286 0.801574 AGGGGGTTGGGTAGAGGTTA 59.198 55.000 0.0 0.0 0.00 2.85 F
1798 2287 1.210538 GGGGGTTGGGTAGAGGTTAG 58.789 60.000 0.0 0.0 0.00 2.34 F
1799 2288 1.210538 GGGGTTGGGTAGAGGTTAGG 58.789 60.000 0.0 0.0 0.00 2.69 F
1800 2289 1.556475 GGGGTTGGGTAGAGGTTAGGT 60.556 57.143 0.0 0.0 0.00 3.08 F
3931 4420 1.666888 CGTTGCTCCCAAAATGCAGTC 60.667 52.381 0.0 0.0 38.01 3.51 F
4632 5121 1.198713 GTGGAGAGGAGAATGGAGCA 58.801 55.000 0.0 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1675 2164 0.033090 ACCACCGTTCTTCTTCGACC 59.967 55.000 0.0 0.00 0.00 4.79 R
3665 4154 1.204146 GGTACTCTTGAGCATCCCCA 58.796 55.000 0.0 0.00 0.00 4.96 R
3725 4214 3.252458 GGACATACTTTCGCCTGTTGTTT 59.748 43.478 0.0 0.00 0.00 2.83 R
3774 4263 4.234574 CGTCTACATGCTTACACACTTCA 58.765 43.478 0.0 0.00 0.00 3.02 R
3931 4420 7.985752 ACCGAAAGATAGGTAAGGAGTAAATTG 59.014 37.037 0.0 0.00 39.30 2.32 R
3984 4473 9.798994 AAGCATGTCTTGAAATTTGATATTCTC 57.201 29.630 0.0 0.00 32.79 2.87 R
4023 4512 8.028938 GGCATGTGGATTTTATCATGTATTACC 58.971 37.037 0.0 0.00 39.54 2.85 R
4445 4934 3.318839 TGCTCAATCAAAACTCCCTGTTG 59.681 43.478 0.0 0.00 39.13 3.33 R
4467 4956 8.199449 CCAGGAATGCAACTAAATTATTGACAT 58.801 33.333 0.0 2.86 0.00 3.06 R
4743 5232 0.108945 GGTTGCCAAATCAGAGCTGC 60.109 55.000 0.0 0.00 0.00 5.25 R
5793 8439 3.205507 AGGGTAGCATCAGTAGAAGGAGA 59.794 47.826 0.0 0.00 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 3.254892 GAGTTTGTCGACCTCTGGATTC 58.745 50.000 14.12 0.00 0.00 2.52
84 85 2.094700 CGACCTCTGGATTCGTCTTGAA 60.095 50.000 0.00 0.00 41.81 2.69
203 221 6.539173 ACCACCATGAACAATACTACTTGAA 58.461 36.000 0.00 0.00 0.00 2.69
213 231 5.243060 ACAATACTACTTGAAAGGTTTGGGC 59.757 40.000 0.00 0.00 0.00 5.36
220 238 0.405973 GAAAGGTTTGGGCTCCTCCT 59.594 55.000 0.00 0.00 33.09 3.69
245 263 6.119240 AGATCAAGTTCTTCTCATGGTTGA 57.881 37.500 0.00 0.00 0.00 3.18
297 315 0.762418 TTGAAGAAGCGAGGTTGGGA 59.238 50.000 0.00 0.00 0.00 4.37
349 367 4.664677 ACGAGACTGCCGCACACC 62.665 66.667 0.00 0.00 0.00 4.16
353 371 2.031163 GACTGCCGCACACCTCTT 59.969 61.111 0.00 0.00 0.00 2.85
387 405 0.179121 TACACGTTGCATAGCCGGAG 60.179 55.000 5.05 0.00 0.00 4.63
394 412 1.953559 TGCATAGCCGGAGAATGTTC 58.046 50.000 5.05 0.00 0.00 3.18
395 413 1.209261 TGCATAGCCGGAGAATGTTCA 59.791 47.619 5.05 0.00 0.00 3.18
396 414 2.288666 GCATAGCCGGAGAATGTTCAA 58.711 47.619 5.05 0.00 0.00 2.69
430 448 3.136626 GCTTAGGGGCTCTGGAGATTAAA 59.863 47.826 0.00 0.00 0.00 1.52
454 472 2.309136 AAATGAGACCAACCCAAGGG 57.691 50.000 2.91 2.91 42.03 3.95
455 473 0.251787 AATGAGACCAACCCAAGGGC 60.252 55.000 4.70 0.00 39.32 5.19
457 475 4.681624 AGACCAACCCAAGGGCTA 57.318 55.556 4.70 0.00 44.68 3.93
459 477 0.404426 AGACCAACCCAAGGGCTAAC 59.596 55.000 4.70 0.00 44.68 2.34
472 490 4.755656 CTAACCCCCGTTGGCATT 57.244 55.556 0.00 0.00 33.17 3.56
473 491 2.970205 CTAACCCCCGTTGGCATTT 58.030 52.632 0.00 0.00 33.17 2.32
475 493 1.621317 CTAACCCCCGTTGGCATTTTT 59.379 47.619 0.00 0.00 33.17 1.94
521 539 1.200839 GAACGCAACGTCAAGTCGG 59.799 57.895 0.00 0.00 39.99 4.79
522 540 1.485032 GAACGCAACGTCAAGTCGGT 61.485 55.000 0.00 0.00 39.99 4.69
524 542 2.935955 GCAACGTCAAGTCGGTGG 59.064 61.111 6.85 0.00 46.77 4.61
525 543 1.885850 GCAACGTCAAGTCGGTGGT 60.886 57.895 6.85 0.00 46.77 4.16
526 544 1.433837 GCAACGTCAAGTCGGTGGTT 61.434 55.000 6.85 0.00 46.77 3.67
527 545 0.303493 CAACGTCAAGTCGGTGGTTG 59.697 55.000 0.00 0.00 43.61 3.77
543 561 4.578928 GGTGGTTGACTAACATGTTGAAGT 59.421 41.667 21.42 16.76 38.58 3.01
560 578 4.006989 TGAAGTCCAATATGACAAACCGG 58.993 43.478 0.00 0.00 37.73 5.28
604 623 2.622942 GCTTGTCAGTTGGGTCATTTGA 59.377 45.455 0.00 0.00 0.00 2.69
607 626 4.647424 TGTCAGTTGGGTCATTTGAAAC 57.353 40.909 0.00 0.00 0.00 2.78
651 670 9.986833 AAAAACTTATTCAAGATGTTTTGTTGC 57.013 25.926 8.94 0.00 39.67 4.17
652 671 6.991485 ACTTATTCAAGATGTTTTGTTGCG 57.009 33.333 0.00 0.00 35.60 4.85
653 672 5.402270 ACTTATTCAAGATGTTTTGTTGCGC 59.598 36.000 0.00 0.00 35.60 6.09
654 673 1.752753 TCAAGATGTTTTGTTGCGCG 58.247 45.000 0.00 0.00 0.00 6.86
655 674 1.332065 TCAAGATGTTTTGTTGCGCGA 59.668 42.857 12.10 0.00 0.00 5.87
656 675 2.115595 CAAGATGTTTTGTTGCGCGAA 58.884 42.857 12.10 0.00 0.00 4.70
657 676 1.753956 AGATGTTTTGTTGCGCGAAC 58.246 45.000 12.10 12.39 34.84 3.95
658 677 0.775861 GATGTTTTGTTGCGCGAACC 59.224 50.000 12.10 0.00 33.07 3.62
659 678 0.101399 ATGTTTTGTTGCGCGAACCA 59.899 45.000 12.10 0.00 33.07 3.67
660 679 0.109272 TGTTTTGTTGCGCGAACCAA 60.109 45.000 12.10 0.00 33.07 3.67
661 680 0.296349 GTTTTGTTGCGCGAACCAAC 59.704 50.000 12.10 15.78 42.13 3.77
662 681 0.802607 TTTTGTTGCGCGAACCAACC 60.803 50.000 20.42 7.68 41.33 3.77
663 682 1.658686 TTTGTTGCGCGAACCAACCT 61.659 50.000 20.42 0.00 41.33 3.50
664 683 2.051345 GTTGCGCGAACCAACCTG 60.051 61.111 12.10 0.00 37.25 4.00
665 684 2.515057 TTGCGCGAACCAACCTGT 60.515 55.556 12.10 0.00 0.00 4.00
666 685 2.829206 TTGCGCGAACCAACCTGTG 61.829 57.895 12.10 0.00 0.00 3.66
667 686 2.970324 GCGCGAACCAACCTGTGA 60.970 61.111 12.10 0.00 0.00 3.58
668 687 2.325082 GCGCGAACCAACCTGTGAT 61.325 57.895 12.10 0.00 0.00 3.06
669 688 1.852067 GCGCGAACCAACCTGTGATT 61.852 55.000 12.10 0.00 0.00 2.57
670 689 0.110238 CGCGAACCAACCTGTGATTG 60.110 55.000 0.00 0.00 0.00 2.67
671 690 1.234821 GCGAACCAACCTGTGATTGA 58.765 50.000 0.00 0.00 0.00 2.57
672 691 1.197721 GCGAACCAACCTGTGATTGAG 59.802 52.381 0.00 0.00 0.00 3.02
673 692 2.766313 CGAACCAACCTGTGATTGAGA 58.234 47.619 0.00 0.00 0.00 3.27
674 693 3.338249 CGAACCAACCTGTGATTGAGAT 58.662 45.455 0.00 0.00 0.00 2.75
675 694 3.125829 CGAACCAACCTGTGATTGAGATG 59.874 47.826 0.00 0.00 0.00 2.90
676 695 3.077484 ACCAACCTGTGATTGAGATGG 57.923 47.619 0.00 0.00 0.00 3.51
677 696 2.376518 ACCAACCTGTGATTGAGATGGT 59.623 45.455 0.00 0.00 35.20 3.55
678 697 3.181429 ACCAACCTGTGATTGAGATGGTT 60.181 43.478 0.00 0.00 36.57 3.67
679 698 4.042809 ACCAACCTGTGATTGAGATGGTTA 59.957 41.667 0.00 0.00 36.57 2.85
680 699 4.637534 CCAACCTGTGATTGAGATGGTTAG 59.362 45.833 0.00 0.00 36.22 2.34
681 700 4.494091 ACCTGTGATTGAGATGGTTAGG 57.506 45.455 0.00 0.00 0.00 2.69
682 701 3.846588 ACCTGTGATTGAGATGGTTAGGT 59.153 43.478 0.00 0.00 0.00 3.08
683 702 4.194640 CCTGTGATTGAGATGGTTAGGTG 58.805 47.826 0.00 0.00 0.00 4.00
684 703 4.080919 CCTGTGATTGAGATGGTTAGGTGA 60.081 45.833 0.00 0.00 0.00 4.02
685 704 5.491070 CTGTGATTGAGATGGTTAGGTGAA 58.509 41.667 0.00 0.00 0.00 3.18
686 705 5.875224 TGTGATTGAGATGGTTAGGTGAAA 58.125 37.500 0.00 0.00 0.00 2.69
687 706 5.705441 TGTGATTGAGATGGTTAGGTGAAAC 59.295 40.000 0.00 0.00 0.00 2.78
711 730 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
712 731 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
713 732 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
714 733 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
715 734 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
716 735 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
717 736 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
718 737 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
719 738 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
720 739 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
721 740 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
722 741 2.418368 TCCTGGTGCTCGCATTATTT 57.582 45.000 0.00 0.00 0.00 1.40
723 742 2.288666 TCCTGGTGCTCGCATTATTTC 58.711 47.619 0.00 0.00 0.00 2.17
724 743 2.092968 TCCTGGTGCTCGCATTATTTCT 60.093 45.455 0.00 0.00 0.00 2.52
725 744 2.032550 CCTGGTGCTCGCATTATTTCTG 59.967 50.000 0.00 0.00 0.00 3.02
726 745 2.016318 TGGTGCTCGCATTATTTCTGG 58.984 47.619 0.00 0.00 0.00 3.86
727 746 2.288666 GGTGCTCGCATTATTTCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
728 747 2.032178 GGTGCTCGCATTATTTCTGGAC 59.968 50.000 0.00 0.00 0.00 4.02
729 748 2.939103 GTGCTCGCATTATTTCTGGACT 59.061 45.455 0.00 0.00 0.00 3.85
730 749 2.938451 TGCTCGCATTATTTCTGGACTG 59.062 45.455 0.00 0.00 0.00 3.51
731 750 3.198068 GCTCGCATTATTTCTGGACTGA 58.802 45.455 0.00 0.00 0.00 3.41
732 751 3.812053 GCTCGCATTATTTCTGGACTGAT 59.188 43.478 0.00 0.00 0.00 2.90
733 752 4.319333 GCTCGCATTATTTCTGGACTGATG 60.319 45.833 0.00 0.00 0.00 3.07
734 753 3.561310 TCGCATTATTTCTGGACTGATGC 59.439 43.478 0.00 0.00 36.11 3.91
735 754 3.562973 CGCATTATTTCTGGACTGATGCT 59.437 43.478 2.38 0.00 37.01 3.79
736 755 4.751600 CGCATTATTTCTGGACTGATGCTA 59.248 41.667 2.38 0.00 37.01 3.49
737 756 5.237127 CGCATTATTTCTGGACTGATGCTAA 59.763 40.000 2.38 0.00 37.01 3.09
738 757 6.238456 CGCATTATTTCTGGACTGATGCTAAA 60.238 38.462 2.38 0.00 37.01 1.85
739 758 7.483307 GCATTATTTCTGGACTGATGCTAAAA 58.517 34.615 0.00 0.00 36.43 1.52
740 759 7.975616 GCATTATTTCTGGACTGATGCTAAAAA 59.024 33.333 0.00 0.00 36.43 1.94
773 792 2.084546 GTTGTGGGACAGGCTATGTTC 58.915 52.381 0.00 0.00 44.17 3.18
905 1394 0.249398 AGCCGACCCACATGTAAGTC 59.751 55.000 14.54 14.54 0.00 3.01
925 1414 3.723235 CTGCGAGCACCGGCAGTAT 62.723 63.158 0.00 0.00 44.61 2.12
926 1415 2.349969 CTGCGAGCACCGGCAGTATA 62.350 60.000 0.00 0.00 44.61 1.47
1167 1656 1.536662 GGGACGGCTCCTGGGATAT 60.537 63.158 0.00 0.00 36.68 1.63
1335 1824 2.283529 ACGCCACCCGAGAGAACAT 61.284 57.895 0.00 0.00 41.02 2.71
1340 1829 2.107141 CCCGAGAGAACATCCGCC 59.893 66.667 0.00 0.00 0.00 6.13
1342 1831 1.443407 CCGAGAGAACATCCGCCAT 59.557 57.895 0.00 0.00 0.00 4.40
1351 1840 1.019278 ACATCCGCCATGTGTTCGTC 61.019 55.000 0.00 0.00 44.70 4.20
1362 1851 1.532437 TGTGTTCGTCGTATCGTCTGT 59.468 47.619 0.00 0.00 0.00 3.41
1423 1912 2.066999 GCTAGGCCTACCACCAGCT 61.067 63.158 8.91 0.00 39.06 4.24
1435 1924 2.005266 ACCAGCTCCTGCCATCCAT 61.005 57.895 0.00 0.00 40.80 3.41
1438 1927 0.471191 CAGCTCCTGCCATCCATGTA 59.529 55.000 0.00 0.00 40.80 2.29
1441 1930 1.542108 GCTCCTGCCATCCATGTAGAC 60.542 57.143 0.00 0.00 0.00 2.59
1447 1936 4.562347 CCTGCCATCCATGTAGACTACATC 60.562 50.000 22.62 12.44 45.83 3.06
1485 1974 0.329596 AACTTCCCTGTCCCTGATGC 59.670 55.000 0.00 0.00 0.00 3.91
1511 2000 4.816925 GGTATGTCCTCTTAGTCATTTGGC 59.183 45.833 0.00 0.00 0.00 4.52
1580 2069 4.463879 CGAGGGGCTGCTCACCAG 62.464 72.222 0.21 0.00 44.67 4.00
1581 2070 3.005539 GAGGGGCTGCTCACCAGA 61.006 66.667 0.21 0.00 44.64 3.86
1582 2071 2.285969 AGGGGCTGCTCACCAGAT 60.286 61.111 0.21 0.00 44.64 2.90
1583 2072 2.124403 GGGGCTGCTCACCAGATG 60.124 66.667 0.21 0.00 44.64 2.90
1585 2074 2.827642 GGCTGCTCACCAGATGCC 60.828 66.667 0.00 0.00 44.64 4.40
1586 2075 2.045634 GCTGCTCACCAGATGCCA 60.046 61.111 0.00 0.00 44.64 4.92
1587 2076 1.453379 GCTGCTCACCAGATGCCAT 60.453 57.895 0.00 0.00 44.64 4.40
1588 2077 1.725557 GCTGCTCACCAGATGCCATG 61.726 60.000 0.00 0.00 44.64 3.66
1589 2078 1.077285 TGCTCACCAGATGCCATGG 60.077 57.895 7.63 7.63 43.87 3.66
1590 2079 2.487532 GCTCACCAGATGCCATGGC 61.488 63.158 30.54 30.54 41.87 4.40
1601 2090 3.248043 GCCATGGCAGTGTGTAAGA 57.752 52.632 32.08 0.00 41.49 2.10
1602 2091 1.089920 GCCATGGCAGTGTGTAAGAG 58.910 55.000 32.08 0.00 41.49 2.85
1603 2092 1.611673 GCCATGGCAGTGTGTAAGAGT 60.612 52.381 32.08 0.00 41.49 3.24
1604 2093 2.354704 GCCATGGCAGTGTGTAAGAGTA 60.355 50.000 32.08 0.00 41.49 2.59
1605 2094 3.525537 CCATGGCAGTGTGTAAGAGTAG 58.474 50.000 0.00 0.00 0.00 2.57
1606 2095 3.055819 CCATGGCAGTGTGTAAGAGTAGT 60.056 47.826 0.00 0.00 0.00 2.73
1607 2096 3.660501 TGGCAGTGTGTAAGAGTAGTG 57.339 47.619 0.00 0.00 0.00 2.74
1608 2097 3.227614 TGGCAGTGTGTAAGAGTAGTGA 58.772 45.455 0.00 0.00 0.00 3.41
1609 2098 3.832490 TGGCAGTGTGTAAGAGTAGTGAT 59.168 43.478 0.00 0.00 0.00 3.06
1610 2099 4.177026 GGCAGTGTGTAAGAGTAGTGATG 58.823 47.826 0.00 0.00 0.00 3.07
1611 2100 4.177026 GCAGTGTGTAAGAGTAGTGATGG 58.823 47.826 0.00 0.00 0.00 3.51
1612 2101 4.748892 CAGTGTGTAAGAGTAGTGATGGG 58.251 47.826 0.00 0.00 0.00 4.00
1613 2102 4.462834 CAGTGTGTAAGAGTAGTGATGGGA 59.537 45.833 0.00 0.00 0.00 4.37
1614 2103 4.707448 AGTGTGTAAGAGTAGTGATGGGAG 59.293 45.833 0.00 0.00 0.00 4.30
1615 2104 4.023980 TGTGTAAGAGTAGTGATGGGAGG 58.976 47.826 0.00 0.00 0.00 4.30
1616 2105 3.031736 TGTAAGAGTAGTGATGGGAGGC 58.968 50.000 0.00 0.00 0.00 4.70
1617 2106 2.254152 AAGAGTAGTGATGGGAGGCA 57.746 50.000 0.00 0.00 0.00 4.75
1618 2107 2.254152 AGAGTAGTGATGGGAGGCAA 57.746 50.000 0.00 0.00 0.00 4.52
1619 2108 2.114616 AGAGTAGTGATGGGAGGCAAG 58.885 52.381 0.00 0.00 0.00 4.01
1620 2109 1.139853 GAGTAGTGATGGGAGGCAAGG 59.860 57.143 0.00 0.00 0.00 3.61
1621 2110 0.912486 GTAGTGATGGGAGGCAAGGT 59.088 55.000 0.00 0.00 0.00 3.50
1622 2111 0.911769 TAGTGATGGGAGGCAAGGTG 59.088 55.000 0.00 0.00 0.00 4.00
1623 2112 2.048603 GTGATGGGAGGCAAGGTGC 61.049 63.158 0.00 0.00 44.08 5.01
1624 2113 2.233566 TGATGGGAGGCAAGGTGCT 61.234 57.895 0.00 0.00 44.28 4.40
1625 2114 1.452833 GATGGGAGGCAAGGTGCTC 60.453 63.158 0.00 0.00 44.28 4.26
1626 2115 3.335356 ATGGGAGGCAAGGTGCTCG 62.335 63.158 0.00 0.00 44.28 5.03
1627 2116 3.706373 GGGAGGCAAGGTGCTCGA 61.706 66.667 0.00 0.00 44.28 4.04
1628 2117 2.586792 GGAGGCAAGGTGCTCGAT 59.413 61.111 0.00 0.00 44.28 3.59
1629 2118 1.522580 GGAGGCAAGGTGCTCGATC 60.523 63.158 0.00 0.00 44.28 3.69
1630 2119 1.519719 GAGGCAAGGTGCTCGATCT 59.480 57.895 0.00 0.00 44.28 2.75
1631 2120 0.809241 GAGGCAAGGTGCTCGATCTG 60.809 60.000 0.00 0.00 44.28 2.90
1632 2121 1.817099 GGCAAGGTGCTCGATCTGG 60.817 63.158 0.00 0.00 44.28 3.86
1633 2122 1.219124 GCAAGGTGCTCGATCTGGA 59.781 57.895 0.00 0.00 40.96 3.86
1634 2123 0.809241 GCAAGGTGCTCGATCTGGAG 60.809 60.000 0.00 0.00 40.96 3.86
1635 2124 0.534412 CAAGGTGCTCGATCTGGAGT 59.466 55.000 0.00 0.00 36.41 3.85
1636 2125 1.751351 CAAGGTGCTCGATCTGGAGTA 59.249 52.381 0.00 0.00 36.41 2.59
1637 2126 1.394618 AGGTGCTCGATCTGGAGTAC 58.605 55.000 9.38 9.38 45.42 2.73
1638 2127 1.064314 AGGTGCTCGATCTGGAGTACT 60.064 52.381 14.95 0.00 45.45 2.73
1639 2128 1.751924 GGTGCTCGATCTGGAGTACTT 59.248 52.381 14.95 0.00 45.45 2.24
1640 2129 2.480416 GGTGCTCGATCTGGAGTACTTG 60.480 54.545 14.95 0.00 45.45 3.16
1641 2130 1.751351 TGCTCGATCTGGAGTACTTGG 59.249 52.381 0.00 0.00 36.41 3.61
1642 2131 1.751924 GCTCGATCTGGAGTACTTGGT 59.248 52.381 0.00 0.00 36.41 3.67
1643 2132 2.950309 GCTCGATCTGGAGTACTTGGTA 59.050 50.000 0.00 0.00 36.41 3.25
1644 2133 3.003897 GCTCGATCTGGAGTACTTGGTAG 59.996 52.174 0.00 0.00 36.41 3.18
1645 2134 3.552875 TCGATCTGGAGTACTTGGTAGG 58.447 50.000 0.00 0.00 0.00 3.18
1646 2135 3.201487 TCGATCTGGAGTACTTGGTAGGA 59.799 47.826 0.00 0.00 0.00 2.94
1647 2136 3.566322 CGATCTGGAGTACTTGGTAGGAG 59.434 52.174 0.00 0.00 0.00 3.69
1648 2137 4.538738 GATCTGGAGTACTTGGTAGGAGT 58.461 47.826 0.00 0.00 0.00 3.85
1649 2138 3.965694 TCTGGAGTACTTGGTAGGAGTC 58.034 50.000 0.00 0.00 34.37 3.36
1650 2139 3.592427 TCTGGAGTACTTGGTAGGAGTCT 59.408 47.826 0.00 0.00 35.34 3.24
1651 2140 3.697045 CTGGAGTACTTGGTAGGAGTCTG 59.303 52.174 0.00 0.00 35.34 3.51
1652 2141 3.075582 TGGAGTACTTGGTAGGAGTCTGT 59.924 47.826 0.00 0.00 35.34 3.41
1653 2142 3.695556 GGAGTACTTGGTAGGAGTCTGTC 59.304 52.174 0.00 0.00 35.34 3.51
1654 2143 4.568169 GGAGTACTTGGTAGGAGTCTGTCT 60.568 50.000 0.00 0.00 35.34 3.41
1655 2144 5.000570 AGTACTTGGTAGGAGTCTGTCTT 57.999 43.478 0.00 0.00 0.00 3.01
1656 2145 4.767928 AGTACTTGGTAGGAGTCTGTCTTG 59.232 45.833 0.00 0.00 0.00 3.02
1657 2146 2.300437 ACTTGGTAGGAGTCTGTCTTGC 59.700 50.000 0.00 0.00 0.00 4.01
1658 2147 0.888619 TGGTAGGAGTCTGTCTTGCG 59.111 55.000 0.00 0.00 0.00 4.85
1659 2148 0.173708 GGTAGGAGTCTGTCTTGCGG 59.826 60.000 0.00 0.00 0.00 5.69
1660 2149 0.173708 GTAGGAGTCTGTCTTGCGGG 59.826 60.000 0.00 0.00 0.00 6.13
1661 2150 0.039180 TAGGAGTCTGTCTTGCGGGA 59.961 55.000 0.00 0.00 0.00 5.14
1662 2151 1.216710 GGAGTCTGTCTTGCGGGAG 59.783 63.158 0.00 0.00 0.00 4.30
1663 2152 1.251527 GGAGTCTGTCTTGCGGGAGA 61.252 60.000 0.00 0.00 0.00 3.71
1664 2153 0.172352 GAGTCTGTCTTGCGGGAGAG 59.828 60.000 0.00 0.00 0.00 3.20
1665 2154 1.216710 GTCTGTCTTGCGGGAGAGG 59.783 63.158 3.74 0.00 0.00 3.69
1666 2155 1.076727 TCTGTCTTGCGGGAGAGGA 59.923 57.895 3.74 0.00 0.00 3.71
1667 2156 0.541998 TCTGTCTTGCGGGAGAGGAA 60.542 55.000 3.74 0.00 0.00 3.36
1668 2157 0.321671 CTGTCTTGCGGGAGAGGAAA 59.678 55.000 0.00 0.00 0.00 3.13
1669 2158 0.321671 TGTCTTGCGGGAGAGGAAAG 59.678 55.000 0.00 0.00 0.00 2.62
1670 2159 0.391793 GTCTTGCGGGAGAGGAAAGG 60.392 60.000 0.00 0.00 0.00 3.11
1671 2160 1.078143 CTTGCGGGAGAGGAAAGGG 60.078 63.158 0.00 0.00 0.00 3.95
1672 2161 2.543067 CTTGCGGGAGAGGAAAGGGG 62.543 65.000 0.00 0.00 0.00 4.79
1673 2162 3.009714 GCGGGAGAGGAAAGGGGT 61.010 66.667 0.00 0.00 0.00 4.95
1674 2163 1.688187 GCGGGAGAGGAAAGGGGTA 60.688 63.158 0.00 0.00 0.00 3.69
1675 2164 1.687297 GCGGGAGAGGAAAGGGGTAG 61.687 65.000 0.00 0.00 0.00 3.18
1676 2165 1.049289 CGGGAGAGGAAAGGGGTAGG 61.049 65.000 0.00 0.00 0.00 3.18
1677 2166 0.044397 GGGAGAGGAAAGGGGTAGGT 59.956 60.000 0.00 0.00 0.00 3.08
1678 2167 1.498264 GGAGAGGAAAGGGGTAGGTC 58.502 60.000 0.00 0.00 0.00 3.85
1679 2168 1.112950 GAGAGGAAAGGGGTAGGTCG 58.887 60.000 0.00 0.00 0.00 4.79
1680 2169 0.708802 AGAGGAAAGGGGTAGGTCGA 59.291 55.000 0.00 0.00 0.00 4.20
1681 2170 1.078324 AGAGGAAAGGGGTAGGTCGAA 59.922 52.381 0.00 0.00 0.00 3.71
1682 2171 1.481363 GAGGAAAGGGGTAGGTCGAAG 59.519 57.143 0.00 0.00 0.00 3.79
1683 2172 1.078324 AGGAAAGGGGTAGGTCGAAGA 59.922 52.381 0.00 0.00 0.00 2.87
1684 2173 1.904537 GGAAAGGGGTAGGTCGAAGAA 59.095 52.381 0.00 0.00 39.69 2.52
1685 2174 2.093606 GGAAAGGGGTAGGTCGAAGAAG 60.094 54.545 0.00 0.00 39.69 2.85
1686 2175 2.617840 AAGGGGTAGGTCGAAGAAGA 57.382 50.000 0.00 0.00 39.69 2.87
1687 2176 2.617840 AGGGGTAGGTCGAAGAAGAA 57.382 50.000 0.00 0.00 39.69 2.52
1688 2177 2.177734 AGGGGTAGGTCGAAGAAGAAC 58.822 52.381 0.00 0.00 39.69 3.01
1689 2178 1.135170 GGGGTAGGTCGAAGAAGAACG 60.135 57.143 0.00 0.00 39.69 3.95
1690 2179 1.135170 GGGTAGGTCGAAGAAGAACGG 60.135 57.143 0.00 0.00 39.69 4.44
1691 2180 1.543358 GGTAGGTCGAAGAAGAACGGT 59.457 52.381 0.00 0.00 39.69 4.83
1692 2181 2.593257 GTAGGTCGAAGAAGAACGGTG 58.407 52.381 0.00 0.00 39.69 4.94
1693 2182 0.317479 AGGTCGAAGAAGAACGGTGG 59.683 55.000 0.00 0.00 39.69 4.61
1694 2183 0.033090 GGTCGAAGAAGAACGGTGGT 59.967 55.000 0.00 0.00 39.69 4.16
1695 2184 1.270550 GGTCGAAGAAGAACGGTGGTA 59.729 52.381 0.00 0.00 39.69 3.25
1696 2185 2.593257 GTCGAAGAAGAACGGTGGTAG 58.407 52.381 0.00 0.00 39.69 3.18
1697 2186 1.068055 TCGAAGAAGAACGGTGGTAGC 60.068 52.381 0.00 0.00 0.00 3.58
1698 2187 1.723220 GAAGAAGAACGGTGGTAGCC 58.277 55.000 0.00 0.00 0.00 3.93
1699 2188 0.323957 AAGAAGAACGGTGGTAGCCC 59.676 55.000 0.00 0.00 0.00 5.19
1700 2189 1.078637 GAAGAACGGTGGTAGCCCC 60.079 63.158 0.00 0.00 0.00 5.80
1701 2190 2.532465 GAAGAACGGTGGTAGCCCCC 62.532 65.000 0.00 0.00 0.00 5.40
1702 2191 4.462280 GAACGGTGGTAGCCCCCG 62.462 72.222 15.96 15.96 45.04 5.73
1707 2196 4.162690 GTGGTAGCCCCCGCTCAG 62.163 72.222 0.00 0.00 43.95 3.35
1717 2206 4.559063 CCGCTCAGGGATGCCAGG 62.559 72.222 5.86 0.00 35.97 4.45
1718 2207 4.559063 CGCTCAGGGATGCCAGGG 62.559 72.222 5.86 0.00 0.00 4.45
1719 2208 4.891037 GCTCAGGGATGCCAGGGC 62.891 72.222 4.36 4.36 42.35 5.19
1720 2209 4.559063 CTCAGGGATGCCAGGGCG 62.559 72.222 5.86 0.00 45.51 6.13
1739 2228 4.666253 TGGCTCTGGGCAAGGTGC 62.666 66.667 0.21 0.00 45.10 5.01
1748 2237 2.676471 GCAAGGTGCCGTGGGAAT 60.676 61.111 6.31 0.00 37.42 3.01
1749 2238 1.377987 GCAAGGTGCCGTGGGAATA 60.378 57.895 6.31 0.00 37.42 1.75
1750 2239 0.963355 GCAAGGTGCCGTGGGAATAA 60.963 55.000 6.31 0.00 37.42 1.40
1751 2240 1.540267 CAAGGTGCCGTGGGAATAAA 58.460 50.000 0.00 0.00 0.00 1.40
1752 2241 2.099405 CAAGGTGCCGTGGGAATAAAT 58.901 47.619 0.00 0.00 0.00 1.40
1753 2242 1.762708 AGGTGCCGTGGGAATAAATG 58.237 50.000 0.00 0.00 0.00 2.32
1754 2243 0.744281 GGTGCCGTGGGAATAAATGG 59.256 55.000 0.00 0.00 0.00 3.16
1755 2244 1.470051 GTGCCGTGGGAATAAATGGT 58.530 50.000 0.00 0.00 0.00 3.55
1756 2245 1.404035 GTGCCGTGGGAATAAATGGTC 59.596 52.381 0.00 0.00 0.00 4.02
1757 2246 1.283613 TGCCGTGGGAATAAATGGTCT 59.716 47.619 0.00 0.00 0.00 3.85
1758 2247 1.676006 GCCGTGGGAATAAATGGTCTG 59.324 52.381 0.00 0.00 0.00 3.51
1759 2248 2.944094 GCCGTGGGAATAAATGGTCTGT 60.944 50.000 0.00 0.00 0.00 3.41
1760 2249 2.943033 CCGTGGGAATAAATGGTCTGTC 59.057 50.000 0.00 0.00 0.00 3.51
1761 2250 3.605634 CGTGGGAATAAATGGTCTGTCA 58.394 45.455 0.00 0.00 0.00 3.58
1762 2251 4.199310 CGTGGGAATAAATGGTCTGTCAT 58.801 43.478 0.00 0.00 0.00 3.06
1763 2252 4.273480 CGTGGGAATAAATGGTCTGTCATC 59.727 45.833 0.00 0.00 0.00 2.92
1764 2253 4.273480 GTGGGAATAAATGGTCTGTCATCG 59.727 45.833 0.00 0.00 0.00 3.84
1765 2254 4.080582 TGGGAATAAATGGTCTGTCATCGT 60.081 41.667 0.00 0.00 0.00 3.73
1766 2255 4.511826 GGGAATAAATGGTCTGTCATCGTC 59.488 45.833 0.00 0.00 0.00 4.20
1767 2256 5.360591 GGAATAAATGGTCTGTCATCGTCT 58.639 41.667 0.00 0.00 0.00 4.18
1768 2257 5.463724 GGAATAAATGGTCTGTCATCGTCTC 59.536 44.000 0.00 0.00 0.00 3.36
1769 2258 2.568696 AATGGTCTGTCATCGTCTCG 57.431 50.000 0.00 0.00 0.00 4.04
1770 2259 0.101399 ATGGTCTGTCATCGTCTCGC 59.899 55.000 0.00 0.00 0.00 5.03
1771 2260 0.960861 TGGTCTGTCATCGTCTCGCT 60.961 55.000 0.00 0.00 0.00 4.93
1772 2261 1.015109 GGTCTGTCATCGTCTCGCTA 58.985 55.000 0.00 0.00 0.00 4.26
1773 2262 1.400846 GGTCTGTCATCGTCTCGCTAA 59.599 52.381 0.00 0.00 0.00 3.09
1774 2263 2.539953 GGTCTGTCATCGTCTCGCTAAG 60.540 54.545 0.00 0.00 0.00 2.18
1775 2264 1.671328 TCTGTCATCGTCTCGCTAAGG 59.329 52.381 0.00 0.00 0.00 2.69
1776 2265 0.738975 TGTCATCGTCTCGCTAAGGG 59.261 55.000 0.00 0.00 0.00 3.95
1777 2266 1.022735 GTCATCGTCTCGCTAAGGGA 58.977 55.000 0.00 0.00 0.00 4.20
1778 2267 1.404391 GTCATCGTCTCGCTAAGGGAA 59.596 52.381 0.00 0.00 0.00 3.97
1779 2268 1.676529 TCATCGTCTCGCTAAGGGAAG 59.323 52.381 0.00 0.00 0.00 3.46
1780 2269 1.033574 ATCGTCTCGCTAAGGGAAGG 58.966 55.000 0.00 0.00 29.36 3.46
1781 2270 1.035932 TCGTCTCGCTAAGGGAAGGG 61.036 60.000 0.00 0.00 29.36 3.95
1782 2271 1.823976 GTCTCGCTAAGGGAAGGGG 59.176 63.158 0.00 0.00 0.00 4.79
1783 2272 1.382695 TCTCGCTAAGGGAAGGGGG 60.383 63.158 0.00 0.00 0.00 5.40
1784 2273 1.689582 CTCGCTAAGGGAAGGGGGT 60.690 63.158 0.00 0.00 0.00 4.95
1785 2274 1.229723 TCGCTAAGGGAAGGGGGTT 60.230 57.895 0.00 0.00 0.00 4.11
1786 2275 1.077716 CGCTAAGGGAAGGGGGTTG 60.078 63.158 0.00 0.00 0.00 3.77
1787 2276 1.306633 GCTAAGGGAAGGGGGTTGG 59.693 63.158 0.00 0.00 0.00 3.77
1788 2277 2.007576 CTAAGGGAAGGGGGTTGGG 58.992 63.158 0.00 0.00 0.00 4.12
1789 2278 0.849540 CTAAGGGAAGGGGGTTGGGT 60.850 60.000 0.00 0.00 0.00 4.51
1790 2279 0.501934 TAAGGGAAGGGGGTTGGGTA 59.498 55.000 0.00 0.00 0.00 3.69
1791 2280 0.849540 AAGGGAAGGGGGTTGGGTAG 60.850 60.000 0.00 0.00 0.00 3.18
1792 2281 1.230050 GGGAAGGGGGTTGGGTAGA 60.230 63.158 0.00 0.00 0.00 2.59
1793 2282 1.279749 GGGAAGGGGGTTGGGTAGAG 61.280 65.000 0.00 0.00 0.00 2.43
1794 2283 1.279749 GGAAGGGGGTTGGGTAGAGG 61.280 65.000 0.00 0.00 0.00 3.69
1795 2284 0.549413 GAAGGGGGTTGGGTAGAGGT 60.549 60.000 0.00 0.00 0.00 3.85
1796 2285 0.103554 AAGGGGGTTGGGTAGAGGTT 60.104 55.000 0.00 0.00 0.00 3.50
1797 2286 0.801574 AGGGGGTTGGGTAGAGGTTA 59.198 55.000 0.00 0.00 0.00 2.85
1798 2287 1.210538 GGGGGTTGGGTAGAGGTTAG 58.789 60.000 0.00 0.00 0.00 2.34
1799 2288 1.210538 GGGGTTGGGTAGAGGTTAGG 58.789 60.000 0.00 0.00 0.00 2.69
1800 2289 1.556475 GGGGTTGGGTAGAGGTTAGGT 60.556 57.143 0.00 0.00 0.00 3.08
1801 2290 2.272698 GGGTTGGGTAGAGGTTAGGTT 58.727 52.381 0.00 0.00 0.00 3.50
1802 2291 2.646297 GGGTTGGGTAGAGGTTAGGTTT 59.354 50.000 0.00 0.00 0.00 3.27
1803 2292 3.074985 GGGTTGGGTAGAGGTTAGGTTTT 59.925 47.826 0.00 0.00 0.00 2.43
1804 2293 4.077108 GGTTGGGTAGAGGTTAGGTTTTG 58.923 47.826 0.00 0.00 0.00 2.44
1805 2294 4.077108 GTTGGGTAGAGGTTAGGTTTTGG 58.923 47.826 0.00 0.00 0.00 3.28
1806 2295 2.645797 TGGGTAGAGGTTAGGTTTTGGG 59.354 50.000 0.00 0.00 0.00 4.12
1807 2296 2.025605 GGGTAGAGGTTAGGTTTTGGGG 60.026 54.545 0.00 0.00 0.00 4.96
1808 2297 2.914941 GGTAGAGGTTAGGTTTTGGGGA 59.085 50.000 0.00 0.00 0.00 4.81
1809 2298 3.054582 GGTAGAGGTTAGGTTTTGGGGAG 60.055 52.174 0.00 0.00 0.00 4.30
1810 2299 2.714808 AGAGGTTAGGTTTTGGGGAGT 58.285 47.619 0.00 0.00 0.00 3.85
1811 2300 3.061369 AGAGGTTAGGTTTTGGGGAGTT 58.939 45.455 0.00 0.00 0.00 3.01
1812 2301 3.154710 GAGGTTAGGTTTTGGGGAGTTG 58.845 50.000 0.00 0.00 0.00 3.16
1813 2302 2.158370 AGGTTAGGTTTTGGGGAGTTGG 60.158 50.000 0.00 0.00 0.00 3.77
3665 4154 4.697352 GTCTGCTGGTTGAAATGTAGTGAT 59.303 41.667 0.00 0.00 0.00 3.06
3736 4225 4.383602 CGGCGGAAACAACAGGCG 62.384 66.667 0.00 0.00 44.81 5.52
3738 4227 2.548295 GGCGGAAACAACAGGCGAA 61.548 57.895 0.00 0.00 0.00 4.70
3774 4263 5.964477 TCACCCATGATAGACTAGACCTTTT 59.036 40.000 0.00 0.00 0.00 2.27
3931 4420 1.666888 CGTTGCTCCCAAAATGCAGTC 60.667 52.381 0.00 0.00 38.01 3.51
4023 4512 2.795329 ACATGCTTGTCAGTAAAGGGG 58.205 47.619 0.00 0.00 0.00 4.79
4402 4891 6.144402 GTGCAGGTCTTGTGTTATTTTCATTG 59.856 38.462 0.00 0.00 0.00 2.82
4455 4944 4.885907 CAGCATAAATGATCAACAGGGAGT 59.114 41.667 0.00 0.00 0.00 3.85
4463 4952 5.710513 TGATCAACAGGGAGTTTTGATTG 57.289 39.130 0.00 0.00 39.53 2.67
4467 4956 3.228188 ACAGGGAGTTTTGATTGAGCA 57.772 42.857 0.00 0.00 0.00 4.26
4471 4960 3.760684 AGGGAGTTTTGATTGAGCATGTC 59.239 43.478 0.00 0.00 0.00 3.06
4472 4961 3.507233 GGGAGTTTTGATTGAGCATGTCA 59.493 43.478 0.00 0.00 0.00 3.58
4496 4985 7.395772 TCAATAATTTAGTTGCATTCCTGGTGA 59.604 33.333 0.00 0.00 0.00 4.02
4497 4986 5.649782 AATTTAGTTGCATTCCTGGTGAG 57.350 39.130 0.00 0.00 0.00 3.51
4511 5000 3.429547 CCTGGTGAGTACTGAAGGAATCG 60.430 52.174 0.00 0.00 0.00 3.34
4526 5015 2.805099 GGAATCGTGGAGCTGAATGATC 59.195 50.000 0.00 0.00 0.00 2.92
4561 5050 1.654105 GTGCGGACGATGTTCACTAAG 59.346 52.381 0.00 0.00 0.00 2.18
4567 5056 4.504858 GGACGATGTTCACTAAGTTCCAT 58.495 43.478 0.00 0.00 0.00 3.41
4609 5098 7.344913 AGCATCAATTAGAACTGGAAGATCTT 58.655 34.615 7.95 7.95 44.37 2.40
4632 5121 1.198713 GTGGAGAGGAGAATGGAGCA 58.801 55.000 0.00 0.00 0.00 4.26
4699 5188 3.245284 ACGTGACTGTTTCATTTCTGTCG 59.755 43.478 0.00 0.00 36.32 4.35
4767 5256 0.960364 TCTGATTTGGCAACCGCTCC 60.960 55.000 0.00 0.00 38.60 4.70
4814 5303 3.136123 CCAATGCACGGGAGCCAG 61.136 66.667 0.00 0.00 0.00 4.85
4821 5310 2.526873 ACGGGAGCCAGACCAGTT 60.527 61.111 0.00 0.00 32.44 3.16
4835 5324 2.777692 GACCAGTTCTTGATATGGGGGA 59.222 50.000 0.00 0.00 37.13 4.81
4837 5326 3.395941 ACCAGTTCTTGATATGGGGGATC 59.604 47.826 0.00 0.00 37.13 3.36
4856 5345 0.465705 CGAGAAGATAGCTGCCCCAA 59.534 55.000 0.00 0.00 0.00 4.12
4871 5360 2.283298 CCCCAACTCTGATGATGTTCG 58.717 52.381 0.00 0.00 0.00 3.95
4940 5430 8.866970 TTTGATGGCATATAGAAGCAATGATA 57.133 30.769 0.00 0.00 0.00 2.15
4955 5445 6.385033 AGCAATGATACAGCAAACTTTCTTC 58.615 36.000 0.00 0.00 0.00 2.87
5010 5500 6.903479 GCGGTTAAAGAGTTTCCGTTATTATG 59.097 38.462 0.00 0.00 42.62 1.90
5033 5523 1.152984 CGCATCTTGTGGGGGCATA 60.153 57.895 0.00 0.00 37.14 3.14
5034 5524 1.447317 CGCATCTTGTGGGGGCATAC 61.447 60.000 0.00 0.00 37.14 2.39
5036 5526 1.972872 CATCTTGTGGGGGCATACTC 58.027 55.000 0.00 0.00 0.00 2.59
5038 5528 1.668826 TCTTGTGGGGGCATACTCTT 58.331 50.000 0.00 0.00 0.00 2.85
5053 5543 5.163581 GCATACTCTTTCATTTGCTGTGGAT 60.164 40.000 0.00 0.00 0.00 3.41
5065 5555 1.522668 CTGTGGATTTTGTCGGAGCA 58.477 50.000 0.00 0.00 0.00 4.26
5068 5558 3.680490 TGTGGATTTTGTCGGAGCAATA 58.320 40.909 0.00 0.00 0.00 1.90
5235 5726 6.411376 CCCATGTGTAGTTTGATAGGTGTTA 58.589 40.000 0.00 0.00 0.00 2.41
5275 5766 3.374042 TCACTTTGACCCAGGTTTTCA 57.626 42.857 0.00 0.00 0.00 2.69
5558 8195 6.283694 TCATGTCATGTTTGCTCTCTATACC 58.716 40.000 12.54 0.00 0.00 2.73
5794 8440 3.754188 GACTCCTTGTCATGCATGTTC 57.246 47.619 25.43 19.05 44.73 3.18
5795 8441 3.341823 GACTCCTTGTCATGCATGTTCT 58.658 45.455 25.43 4.46 44.73 3.01
6147 8797 1.673665 GTCAGCCCAGCCTTCACTG 60.674 63.158 0.00 0.00 37.42 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 2.021457 CCCGGTTGAAGTTGAAACTGT 58.979 47.619 0.00 0.00 39.66 3.55
203 221 1.636003 CTTAGGAGGAGCCCAAACCTT 59.364 52.381 0.00 0.00 36.57 3.50
213 231 6.379703 TGAGAAGAACTTGATCTTAGGAGGAG 59.620 42.308 0.00 0.00 39.70 3.69
220 238 7.604164 GTCAACCATGAGAAGAACTTGATCTTA 59.396 37.037 0.00 0.00 39.70 2.10
245 263 5.153513 CGTCCAAATCATGTTTTGAATCGT 58.846 37.500 24.43 0.00 38.58 3.73
349 367 2.841442 ACCAGGACCGAAAGAAAGAG 57.159 50.000 0.00 0.00 0.00 2.85
353 371 1.000060 CGTGTACCAGGACCGAAAGAA 60.000 52.381 0.00 0.00 0.00 2.52
387 405 2.229784 CCAAGCCACTCCTTGAACATTC 59.770 50.000 3.65 0.00 43.79 2.67
394 412 1.457346 CTAAGCCAAGCCACTCCTTG 58.543 55.000 0.00 0.00 41.40 3.61
395 413 0.329596 CCTAAGCCAAGCCACTCCTT 59.670 55.000 0.00 0.00 0.00 3.36
396 414 1.566298 CCCTAAGCCAAGCCACTCCT 61.566 60.000 0.00 0.00 0.00 3.69
433 451 2.972021 CCCTTGGGTTGGTCTCATTTTT 59.028 45.455 0.00 0.00 0.00 1.94
435 453 1.827245 GCCCTTGGGTTGGTCTCATTT 60.827 52.381 7.61 0.00 0.00 2.32
436 454 0.251787 GCCCTTGGGTTGGTCTCATT 60.252 55.000 7.61 0.00 0.00 2.57
438 456 0.474854 TAGCCCTTGGGTTGGTCTCA 60.475 55.000 7.61 0.00 34.28 3.27
439 457 0.696501 TTAGCCCTTGGGTTGGTCTC 59.303 55.000 7.61 0.00 34.28 3.36
440 458 0.404426 GTTAGCCCTTGGGTTGGTCT 59.596 55.000 7.61 0.00 34.28 3.85
441 459 0.611062 GGTTAGCCCTTGGGTTGGTC 60.611 60.000 7.61 0.00 34.28 4.02
443 461 4.434483 GGTTAGCCCTTGGGTTGG 57.566 61.111 7.61 0.00 34.28 3.77
453 471 3.655350 ATGCCAACGGGGGTTAGCC 62.655 63.158 0.00 0.00 37.04 3.93
454 472 1.254975 AAATGCCAACGGGGGTTAGC 61.255 55.000 0.00 0.00 37.04 3.09
455 473 1.262417 AAAATGCCAACGGGGGTTAG 58.738 50.000 0.00 0.00 37.04 2.34
456 474 1.718280 AAAAATGCCAACGGGGGTTA 58.282 45.000 0.00 0.00 37.04 2.85
457 475 2.534038 AAAAATGCCAACGGGGGTT 58.466 47.368 0.00 0.00 37.04 4.11
473 491 8.015087 CGCGCATTGATTAATCTCCTATAAAAA 58.985 33.333 16.24 0.00 0.00 1.94
475 493 6.092122 CCGCGCATTGATTAATCTCCTATAAA 59.908 38.462 16.24 1.24 0.00 1.40
476 494 5.580691 CCGCGCATTGATTAATCTCCTATAA 59.419 40.000 16.24 1.93 0.00 0.98
479 497 3.325870 CCGCGCATTGATTAATCTCCTA 58.674 45.455 16.24 0.65 0.00 2.94
480 498 2.146342 CCGCGCATTGATTAATCTCCT 58.854 47.619 16.24 0.00 0.00 3.69
481 499 1.400242 GCCGCGCATTGATTAATCTCC 60.400 52.381 16.24 1.99 0.00 3.71
482 500 1.722751 CGCCGCGCATTGATTAATCTC 60.723 52.381 16.24 3.01 0.00 2.75
486 504 1.369839 TTCCGCCGCGCATTGATTAA 61.370 50.000 8.75 0.00 0.00 1.40
487 505 1.815840 TTCCGCCGCGCATTGATTA 60.816 52.632 8.75 0.00 0.00 1.75
518 536 3.135225 CAACATGTTAGTCAACCACCGA 58.865 45.455 11.53 0.00 33.41 4.69
519 537 3.135225 TCAACATGTTAGTCAACCACCG 58.865 45.455 11.53 0.00 33.41 4.94
521 539 5.277828 GGACTTCAACATGTTAGTCAACCAC 60.278 44.000 29.50 16.10 38.96 4.16
522 540 4.819630 GGACTTCAACATGTTAGTCAACCA 59.180 41.667 29.50 5.04 38.96 3.67
523 541 4.819630 TGGACTTCAACATGTTAGTCAACC 59.180 41.667 29.50 19.75 38.96 3.77
524 542 6.371809 TTGGACTTCAACATGTTAGTCAAC 57.628 37.500 29.50 19.47 38.96 3.18
525 543 8.729756 CATATTGGACTTCAACATGTTAGTCAA 58.270 33.333 29.50 22.03 35.98 3.18
526 544 8.100164 TCATATTGGACTTCAACATGTTAGTCA 58.900 33.333 29.50 17.95 40.24 3.41
527 545 8.391106 GTCATATTGGACTTCAACATGTTAGTC 58.609 37.037 24.33 24.33 40.24 2.59
543 561 3.264706 TCCTTCCGGTTTGTCATATTGGA 59.735 43.478 0.00 0.00 0.00 3.53
560 578 3.071479 TGGTAAGAAACGCATGTCCTTC 58.929 45.455 0.00 0.00 0.00 3.46
570 588 3.498397 ACTGACAAGCATGGTAAGAAACG 59.502 43.478 0.00 0.00 0.00 3.60
571 589 5.215160 CAACTGACAAGCATGGTAAGAAAC 58.785 41.667 0.00 0.00 0.00 2.78
648 667 2.515057 ACAGGTTGGTTCGCGCAA 60.515 55.556 8.75 0.00 0.00 4.85
649 668 3.276091 CACAGGTTGGTTCGCGCA 61.276 61.111 8.75 0.00 0.00 6.09
650 669 1.852067 AATCACAGGTTGGTTCGCGC 61.852 55.000 0.00 0.00 0.00 6.86
651 670 0.110238 CAATCACAGGTTGGTTCGCG 60.110 55.000 0.00 0.00 0.00 5.87
652 671 1.197721 CTCAATCACAGGTTGGTTCGC 59.802 52.381 0.00 0.00 0.00 4.70
653 672 2.766313 TCTCAATCACAGGTTGGTTCG 58.234 47.619 0.00 0.00 0.00 3.95
654 673 3.441572 CCATCTCAATCACAGGTTGGTTC 59.558 47.826 0.00 0.00 0.00 3.62
655 674 3.181429 ACCATCTCAATCACAGGTTGGTT 60.181 43.478 0.00 0.00 32.48 3.67
656 675 2.376518 ACCATCTCAATCACAGGTTGGT 59.623 45.455 0.00 0.00 0.00 3.67
657 676 3.077484 ACCATCTCAATCACAGGTTGG 57.923 47.619 0.00 0.00 0.00 3.77
658 677 4.637534 CCTAACCATCTCAATCACAGGTTG 59.362 45.833 0.00 0.00 39.49 3.77
659 678 4.289672 ACCTAACCATCTCAATCACAGGTT 59.710 41.667 0.00 0.00 41.74 3.50
660 679 3.846588 ACCTAACCATCTCAATCACAGGT 59.153 43.478 0.00 0.00 0.00 4.00
661 680 4.080919 TCACCTAACCATCTCAATCACAGG 60.081 45.833 0.00 0.00 0.00 4.00
662 681 5.089970 TCACCTAACCATCTCAATCACAG 57.910 43.478 0.00 0.00 0.00 3.66
663 682 5.497464 TTCACCTAACCATCTCAATCACA 57.503 39.130 0.00 0.00 0.00 3.58
664 683 5.123979 GGTTTCACCTAACCATCTCAATCAC 59.876 44.000 0.00 0.00 45.59 3.06
665 684 5.253330 GGTTTCACCTAACCATCTCAATCA 58.747 41.667 0.00 0.00 45.59 2.57
666 685 5.819825 GGTTTCACCTAACCATCTCAATC 57.180 43.478 0.00 0.00 45.59 2.67
688 707 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
693 712 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
694 713 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
695 714 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
696 715 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
697 716 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
698 717 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
699 718 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
700 719 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
701 720 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
702 721 2.645838 AATAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
703 722 2.092968 AGAAATAATGCGAGCACCAGGA 60.093 45.455 0.00 0.00 0.00 3.86
704 723 2.032550 CAGAAATAATGCGAGCACCAGG 59.967 50.000 0.00 0.00 0.00 4.45
705 724 2.032550 CCAGAAATAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
706 725 2.016318 CCAGAAATAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
707 726 2.032178 GTCCAGAAATAATGCGAGCACC 59.968 50.000 0.00 0.00 0.00 5.01
708 727 2.939103 AGTCCAGAAATAATGCGAGCAC 59.061 45.455 0.00 0.00 0.00 4.40
709 728 2.938451 CAGTCCAGAAATAATGCGAGCA 59.062 45.455 0.00 0.00 0.00 4.26
710 729 3.198068 TCAGTCCAGAAATAATGCGAGC 58.802 45.455 0.00 0.00 0.00 5.03
711 730 4.319333 GCATCAGTCCAGAAATAATGCGAG 60.319 45.833 0.00 0.00 0.00 5.03
712 731 3.561310 GCATCAGTCCAGAAATAATGCGA 59.439 43.478 0.00 0.00 0.00 5.10
713 732 3.562973 AGCATCAGTCCAGAAATAATGCG 59.437 43.478 0.00 0.00 42.07 4.73
714 733 6.624352 TTAGCATCAGTCCAGAAATAATGC 57.376 37.500 0.00 0.00 38.58 3.56
740 759 5.799213 TGTCCCACAACAAAACATCTTTTT 58.201 33.333 0.00 0.00 0.00 1.94
741 760 5.413309 TGTCCCACAACAAAACATCTTTT 57.587 34.783 0.00 0.00 0.00 2.27
742 761 4.141959 CCTGTCCCACAACAAAACATCTTT 60.142 41.667 0.00 0.00 0.00 2.52
743 762 3.384467 CCTGTCCCACAACAAAACATCTT 59.616 43.478 0.00 0.00 0.00 2.40
744 763 2.958355 CCTGTCCCACAACAAAACATCT 59.042 45.455 0.00 0.00 0.00 2.90
745 764 2.545742 GCCTGTCCCACAACAAAACATC 60.546 50.000 0.00 0.00 0.00 3.06
746 765 1.412343 GCCTGTCCCACAACAAAACAT 59.588 47.619 0.00 0.00 0.00 2.71
747 766 0.820871 GCCTGTCCCACAACAAAACA 59.179 50.000 0.00 0.00 0.00 2.83
748 767 1.111277 AGCCTGTCCCACAACAAAAC 58.889 50.000 0.00 0.00 0.00 2.43
749 768 2.738587 TAGCCTGTCCCACAACAAAA 57.261 45.000 0.00 0.00 0.00 2.44
750 769 2.158534 ACATAGCCTGTCCCACAACAAA 60.159 45.455 0.00 0.00 29.94 2.83
751 770 1.423541 ACATAGCCTGTCCCACAACAA 59.576 47.619 0.00 0.00 29.94 2.83
752 771 1.064003 ACATAGCCTGTCCCACAACA 58.936 50.000 0.00 0.00 29.94 3.33
753 772 2.084546 GAACATAGCCTGTCCCACAAC 58.915 52.381 0.00 0.00 36.98 3.32
773 792 0.323178 AGGCTTGCCTCATTCACCAG 60.323 55.000 8.56 0.00 0.00 4.00
815 834 5.473504 GGATGGGAGTATGCGTGATATTTTT 59.526 40.000 0.00 0.00 0.00 1.94
816 835 5.003804 GGATGGGAGTATGCGTGATATTTT 58.996 41.667 0.00 0.00 0.00 1.82
1252 1741 0.460284 CCCGGTCGATGTTGAGGAAG 60.460 60.000 0.00 0.00 0.00 3.46
1335 1824 1.864725 TACGACGAACACATGGCGGA 61.865 55.000 0.00 0.00 0.00 5.54
1340 1829 2.526289 CAGACGATACGACGAACACATG 59.474 50.000 0.00 0.00 37.03 3.21
1342 1831 1.532437 ACAGACGATACGACGAACACA 59.468 47.619 0.00 0.00 37.03 3.72
1423 1912 2.180946 AGTCTACATGGATGGCAGGA 57.819 50.000 0.00 0.00 0.00 3.86
1447 1936 3.004839 AGTTGTCTGGGATATCGATGACG 59.995 47.826 8.54 0.00 41.26 4.35
1511 2000 1.065854 CCCCCTGTAGCAGAAACAGAG 60.066 57.143 4.84 0.00 45.89 3.35
1583 2072 1.089920 CTCTTACACACTGCCATGGC 58.910 55.000 30.54 30.54 42.35 4.40
1585 2074 3.928992 CACTACTCTTACACACTGCCATG 59.071 47.826 0.00 0.00 0.00 3.66
1586 2075 3.832490 TCACTACTCTTACACACTGCCAT 59.168 43.478 0.00 0.00 0.00 4.40
1587 2076 3.227614 TCACTACTCTTACACACTGCCA 58.772 45.455 0.00 0.00 0.00 4.92
1588 2077 3.936372 TCACTACTCTTACACACTGCC 57.064 47.619 0.00 0.00 0.00 4.85
1589 2078 4.177026 CCATCACTACTCTTACACACTGC 58.823 47.826 0.00 0.00 0.00 4.40
1590 2079 4.462834 TCCCATCACTACTCTTACACACTG 59.537 45.833 0.00 0.00 0.00 3.66
1591 2080 4.673968 TCCCATCACTACTCTTACACACT 58.326 43.478 0.00 0.00 0.00 3.55
1592 2081 4.142138 CCTCCCATCACTACTCTTACACAC 60.142 50.000 0.00 0.00 0.00 3.82
1593 2082 4.023980 CCTCCCATCACTACTCTTACACA 58.976 47.826 0.00 0.00 0.00 3.72
1594 2083 3.181474 GCCTCCCATCACTACTCTTACAC 60.181 52.174 0.00 0.00 0.00 2.90
1595 2084 3.031736 GCCTCCCATCACTACTCTTACA 58.968 50.000 0.00 0.00 0.00 2.41
1596 2085 3.031736 TGCCTCCCATCACTACTCTTAC 58.968 50.000 0.00 0.00 0.00 2.34
1597 2086 3.398318 TGCCTCCCATCACTACTCTTA 57.602 47.619 0.00 0.00 0.00 2.10
1598 2087 2.254152 TGCCTCCCATCACTACTCTT 57.746 50.000 0.00 0.00 0.00 2.85
1599 2088 2.114616 CTTGCCTCCCATCACTACTCT 58.885 52.381 0.00 0.00 0.00 3.24
1600 2089 1.139853 CCTTGCCTCCCATCACTACTC 59.860 57.143 0.00 0.00 0.00 2.59
1601 2090 1.207791 CCTTGCCTCCCATCACTACT 58.792 55.000 0.00 0.00 0.00 2.57
1602 2091 0.912486 ACCTTGCCTCCCATCACTAC 59.088 55.000 0.00 0.00 0.00 2.73
1603 2092 0.911769 CACCTTGCCTCCCATCACTA 59.088 55.000 0.00 0.00 0.00 2.74
1604 2093 1.687612 CACCTTGCCTCCCATCACT 59.312 57.895 0.00 0.00 0.00 3.41
1605 2094 2.048603 GCACCTTGCCTCCCATCAC 61.049 63.158 0.00 0.00 37.42 3.06
1606 2095 2.202236 GAGCACCTTGCCTCCCATCA 62.202 60.000 0.00 0.00 46.52 3.07
1607 2096 1.452833 GAGCACCTTGCCTCCCATC 60.453 63.158 0.00 0.00 46.52 3.51
1608 2097 2.679716 GAGCACCTTGCCTCCCAT 59.320 61.111 0.00 0.00 46.52 4.00
1609 2098 4.020617 CGAGCACCTTGCCTCCCA 62.021 66.667 0.00 0.00 46.52 4.37
1610 2099 2.932130 GATCGAGCACCTTGCCTCCC 62.932 65.000 0.00 0.00 46.52 4.30
1611 2100 1.522580 GATCGAGCACCTTGCCTCC 60.523 63.158 0.00 0.00 46.52 4.30
1612 2101 0.809241 CAGATCGAGCACCTTGCCTC 60.809 60.000 2.38 0.00 46.52 4.70
1613 2102 1.220206 CAGATCGAGCACCTTGCCT 59.780 57.895 2.38 0.00 46.52 4.75
1614 2103 1.817099 CCAGATCGAGCACCTTGCC 60.817 63.158 2.38 0.00 46.52 4.52
1615 2104 0.809241 CTCCAGATCGAGCACCTTGC 60.809 60.000 2.38 0.00 45.46 4.01
1616 2105 0.534412 ACTCCAGATCGAGCACCTTG 59.466 55.000 2.38 0.00 32.79 3.61
1617 2106 1.751924 GTACTCCAGATCGAGCACCTT 59.248 52.381 2.38 0.00 32.79 3.50
1618 2107 1.064314 AGTACTCCAGATCGAGCACCT 60.064 52.381 2.38 0.00 32.79 4.00
1619 2108 1.394618 AGTACTCCAGATCGAGCACC 58.605 55.000 2.38 0.00 32.79 5.01
1620 2109 2.480416 CCAAGTACTCCAGATCGAGCAC 60.480 54.545 2.38 0.00 32.79 4.40
1621 2110 1.751351 CCAAGTACTCCAGATCGAGCA 59.249 52.381 2.38 0.00 32.79 4.26
1622 2111 1.751924 ACCAAGTACTCCAGATCGAGC 59.248 52.381 0.00 0.00 32.79 5.03
1623 2112 3.566322 CCTACCAAGTACTCCAGATCGAG 59.434 52.174 0.00 0.00 35.88 4.04
1624 2113 3.201487 TCCTACCAAGTACTCCAGATCGA 59.799 47.826 0.00 0.00 0.00 3.59
1625 2114 3.552875 TCCTACCAAGTACTCCAGATCG 58.447 50.000 0.00 0.00 0.00 3.69
1626 2115 4.538738 ACTCCTACCAAGTACTCCAGATC 58.461 47.826 0.00 0.00 0.00 2.75
1627 2116 4.230964 AGACTCCTACCAAGTACTCCAGAT 59.769 45.833 0.00 0.00 0.00 2.90
1628 2117 3.592427 AGACTCCTACCAAGTACTCCAGA 59.408 47.826 0.00 0.00 0.00 3.86
1629 2118 3.697045 CAGACTCCTACCAAGTACTCCAG 59.303 52.174 0.00 0.00 0.00 3.86
1630 2119 3.075582 ACAGACTCCTACCAAGTACTCCA 59.924 47.826 0.00 0.00 0.00 3.86
1631 2120 3.695556 GACAGACTCCTACCAAGTACTCC 59.304 52.174 0.00 0.00 0.00 3.85
1632 2121 4.591929 AGACAGACTCCTACCAAGTACTC 58.408 47.826 0.00 0.00 0.00 2.59
1633 2122 4.661247 AGACAGACTCCTACCAAGTACT 57.339 45.455 0.00 0.00 0.00 2.73
1634 2123 4.618693 GCAAGACAGACTCCTACCAAGTAC 60.619 50.000 0.00 0.00 0.00 2.73
1635 2124 3.510360 GCAAGACAGACTCCTACCAAGTA 59.490 47.826 0.00 0.00 0.00 2.24
1636 2125 2.300437 GCAAGACAGACTCCTACCAAGT 59.700 50.000 0.00 0.00 0.00 3.16
1637 2126 2.672478 CGCAAGACAGACTCCTACCAAG 60.672 54.545 0.00 0.00 43.02 3.61
1638 2127 1.272490 CGCAAGACAGACTCCTACCAA 59.728 52.381 0.00 0.00 43.02 3.67
1639 2128 0.888619 CGCAAGACAGACTCCTACCA 59.111 55.000 0.00 0.00 43.02 3.25
1640 2129 0.173708 CCGCAAGACAGACTCCTACC 59.826 60.000 0.00 0.00 43.02 3.18
1641 2130 0.173708 CCCGCAAGACAGACTCCTAC 59.826 60.000 0.00 0.00 43.02 3.18
1642 2131 0.039180 TCCCGCAAGACAGACTCCTA 59.961 55.000 0.00 0.00 43.02 2.94
1643 2132 1.228894 TCCCGCAAGACAGACTCCT 60.229 57.895 0.00 0.00 43.02 3.69
1644 2133 1.216710 CTCCCGCAAGACAGACTCC 59.783 63.158 0.00 0.00 43.02 3.85
1645 2134 0.172352 CTCTCCCGCAAGACAGACTC 59.828 60.000 0.00 0.00 43.02 3.36
1646 2135 1.254284 CCTCTCCCGCAAGACAGACT 61.254 60.000 0.00 0.00 43.02 3.24
1647 2136 1.216710 CCTCTCCCGCAAGACAGAC 59.783 63.158 0.00 0.00 43.02 3.51
1648 2137 0.541998 TTCCTCTCCCGCAAGACAGA 60.542 55.000 0.00 0.00 43.02 3.41
1649 2138 0.321671 TTTCCTCTCCCGCAAGACAG 59.678 55.000 0.00 0.00 43.02 3.51
1650 2139 0.321671 CTTTCCTCTCCCGCAAGACA 59.678 55.000 0.00 0.00 43.02 3.41
1651 2140 0.391793 CCTTTCCTCTCCCGCAAGAC 60.392 60.000 0.00 0.00 43.02 3.01
1652 2141 1.553690 CCCTTTCCTCTCCCGCAAGA 61.554 60.000 0.00 0.00 43.02 3.02
1653 2142 1.078143 CCCTTTCCTCTCCCGCAAG 60.078 63.158 0.00 0.00 0.00 4.01
1654 2143 2.602676 CCCCTTTCCTCTCCCGCAA 61.603 63.158 0.00 0.00 0.00 4.85
1655 2144 2.465010 TACCCCTTTCCTCTCCCGCA 62.465 60.000 0.00 0.00 0.00 5.69
1656 2145 1.687297 CTACCCCTTTCCTCTCCCGC 61.687 65.000 0.00 0.00 0.00 6.13
1657 2146 1.049289 CCTACCCCTTTCCTCTCCCG 61.049 65.000 0.00 0.00 0.00 5.14
1658 2147 0.044397 ACCTACCCCTTTCCTCTCCC 59.956 60.000 0.00 0.00 0.00 4.30
1659 2148 1.498264 GACCTACCCCTTTCCTCTCC 58.502 60.000 0.00 0.00 0.00 3.71
1660 2149 1.112950 CGACCTACCCCTTTCCTCTC 58.887 60.000 0.00 0.00 0.00 3.20
1661 2150 0.708802 TCGACCTACCCCTTTCCTCT 59.291 55.000 0.00 0.00 0.00 3.69
1662 2151 1.481363 CTTCGACCTACCCCTTTCCTC 59.519 57.143 0.00 0.00 0.00 3.71
1663 2152 1.078324 TCTTCGACCTACCCCTTTCCT 59.922 52.381 0.00 0.00 0.00 3.36
1664 2153 1.565067 TCTTCGACCTACCCCTTTCC 58.435 55.000 0.00 0.00 0.00 3.13
1665 2154 2.830321 TCTTCTTCGACCTACCCCTTTC 59.170 50.000 0.00 0.00 0.00 2.62
1666 2155 2.898662 TCTTCTTCGACCTACCCCTTT 58.101 47.619 0.00 0.00 0.00 3.11
1667 2156 2.566279 GTTCTTCTTCGACCTACCCCTT 59.434 50.000 0.00 0.00 0.00 3.95
1668 2157 2.177734 GTTCTTCTTCGACCTACCCCT 58.822 52.381 0.00 0.00 0.00 4.79
1669 2158 1.135170 CGTTCTTCTTCGACCTACCCC 60.135 57.143 0.00 0.00 0.00 4.95
1670 2159 1.135170 CCGTTCTTCTTCGACCTACCC 60.135 57.143 0.00 0.00 0.00 3.69
1671 2160 1.543358 ACCGTTCTTCTTCGACCTACC 59.457 52.381 0.00 0.00 0.00 3.18
1672 2161 2.593257 CACCGTTCTTCTTCGACCTAC 58.407 52.381 0.00 0.00 0.00 3.18
1673 2162 1.542915 CCACCGTTCTTCTTCGACCTA 59.457 52.381 0.00 0.00 0.00 3.08
1674 2163 0.317479 CCACCGTTCTTCTTCGACCT 59.683 55.000 0.00 0.00 0.00 3.85
1675 2164 0.033090 ACCACCGTTCTTCTTCGACC 59.967 55.000 0.00 0.00 0.00 4.79
1676 2165 2.593257 CTACCACCGTTCTTCTTCGAC 58.407 52.381 0.00 0.00 0.00 4.20
1677 2166 1.068055 GCTACCACCGTTCTTCTTCGA 60.068 52.381 0.00 0.00 0.00 3.71
1678 2167 1.347320 GCTACCACCGTTCTTCTTCG 58.653 55.000 0.00 0.00 0.00 3.79
1679 2168 1.675116 GGGCTACCACCGTTCTTCTTC 60.675 57.143 0.00 0.00 36.50 2.87
1680 2169 0.323957 GGGCTACCACCGTTCTTCTT 59.676 55.000 0.00 0.00 36.50 2.52
1681 2170 1.551019 GGGGCTACCACCGTTCTTCT 61.551 60.000 0.00 0.00 39.85 2.85
1682 2171 1.078637 GGGGCTACCACCGTTCTTC 60.079 63.158 0.00 0.00 39.85 2.87
1683 2172 2.599757 GGGGGCTACCACCGTTCTT 61.600 63.158 0.00 0.00 42.91 2.52
1684 2173 3.007323 GGGGGCTACCACCGTTCT 61.007 66.667 0.00 0.00 42.91 3.01
1685 2174 4.462280 CGGGGGCTACCACCGTTC 62.462 72.222 19.22 0.00 42.26 3.95
1690 2179 4.162690 CTGAGCGGGGGCTACCAC 62.163 72.222 0.60 0.00 42.91 4.16
1700 2189 4.559063 CCTGGCATCCCTGAGCGG 62.559 72.222 0.00 0.00 32.15 5.52
1701 2190 4.559063 CCCTGGCATCCCTGAGCG 62.559 72.222 0.00 0.00 32.15 5.03
1702 2191 4.891037 GCCCTGGCATCCCTGAGC 62.891 72.222 2.58 0.00 41.49 4.26
1703 2192 4.559063 CGCCCTGGCATCCCTGAG 62.559 72.222 9.17 0.00 42.06 3.35
1720 2209 3.971702 ACCTTGCCCAGAGCCACC 61.972 66.667 0.00 0.00 42.71 4.61
1721 2210 2.674380 CACCTTGCCCAGAGCCAC 60.674 66.667 0.00 0.00 42.71 5.01
1722 2211 4.666253 GCACCTTGCCCAGAGCCA 62.666 66.667 0.00 0.00 42.71 4.75
1731 2220 0.963355 TTATTCCCACGGCACCTTGC 60.963 55.000 0.00 0.00 44.08 4.01
1732 2221 1.540267 TTTATTCCCACGGCACCTTG 58.460 50.000 0.00 0.00 0.00 3.61
1733 2222 2.099405 CATTTATTCCCACGGCACCTT 58.901 47.619 0.00 0.00 0.00 3.50
1734 2223 1.684869 CCATTTATTCCCACGGCACCT 60.685 52.381 0.00 0.00 0.00 4.00
1735 2224 0.744281 CCATTTATTCCCACGGCACC 59.256 55.000 0.00 0.00 0.00 5.01
1736 2225 1.404035 GACCATTTATTCCCACGGCAC 59.596 52.381 0.00 0.00 0.00 5.01
1737 2226 1.283613 AGACCATTTATTCCCACGGCA 59.716 47.619 0.00 0.00 0.00 5.69
1738 2227 1.676006 CAGACCATTTATTCCCACGGC 59.324 52.381 0.00 0.00 0.00 5.68
1739 2228 2.943033 GACAGACCATTTATTCCCACGG 59.057 50.000 0.00 0.00 0.00 4.94
1740 2229 3.605634 TGACAGACCATTTATTCCCACG 58.394 45.455 0.00 0.00 0.00 4.94
1741 2230 4.273480 CGATGACAGACCATTTATTCCCAC 59.727 45.833 0.00 0.00 0.00 4.61
1742 2231 4.080582 ACGATGACAGACCATTTATTCCCA 60.081 41.667 0.00 0.00 0.00 4.37
1743 2232 4.451900 ACGATGACAGACCATTTATTCCC 58.548 43.478 0.00 0.00 0.00 3.97
1744 2233 5.360591 AGACGATGACAGACCATTTATTCC 58.639 41.667 0.00 0.00 0.00 3.01
1745 2234 5.174035 CGAGACGATGACAGACCATTTATTC 59.826 44.000 0.00 0.00 0.00 1.75
1746 2235 5.043903 CGAGACGATGACAGACCATTTATT 58.956 41.667 0.00 0.00 0.00 1.40
1747 2236 4.611943 CGAGACGATGACAGACCATTTAT 58.388 43.478 0.00 0.00 0.00 1.40
1748 2237 3.733988 GCGAGACGATGACAGACCATTTA 60.734 47.826 0.00 0.00 0.00 1.40
1749 2238 2.881074 CGAGACGATGACAGACCATTT 58.119 47.619 0.00 0.00 0.00 2.32
1750 2239 1.469940 GCGAGACGATGACAGACCATT 60.470 52.381 0.00 0.00 0.00 3.16
1751 2240 0.101399 GCGAGACGATGACAGACCAT 59.899 55.000 0.00 0.00 0.00 3.55
1752 2241 0.960861 AGCGAGACGATGACAGACCA 60.961 55.000 0.00 0.00 0.00 4.02
1753 2242 1.015109 TAGCGAGACGATGACAGACC 58.985 55.000 0.00 0.00 0.00 3.85
1754 2243 2.539953 CCTTAGCGAGACGATGACAGAC 60.540 54.545 0.00 0.00 0.00 3.51
1755 2244 1.671328 CCTTAGCGAGACGATGACAGA 59.329 52.381 0.00 0.00 0.00 3.41
1756 2245 1.268794 CCCTTAGCGAGACGATGACAG 60.269 57.143 0.00 0.00 0.00 3.51
1757 2246 0.738975 CCCTTAGCGAGACGATGACA 59.261 55.000 0.00 0.00 0.00 3.58
1758 2247 1.022735 TCCCTTAGCGAGACGATGAC 58.977 55.000 0.00 0.00 0.00 3.06
1759 2248 1.676529 CTTCCCTTAGCGAGACGATGA 59.323 52.381 0.00 0.00 0.00 2.92
1760 2249 1.269309 CCTTCCCTTAGCGAGACGATG 60.269 57.143 0.00 0.00 0.00 3.84
1761 2250 1.033574 CCTTCCCTTAGCGAGACGAT 58.966 55.000 0.00 0.00 0.00 3.73
1762 2251 1.035932 CCCTTCCCTTAGCGAGACGA 61.036 60.000 0.00 0.00 0.00 4.20
1763 2252 1.437986 CCCTTCCCTTAGCGAGACG 59.562 63.158 0.00 0.00 0.00 4.18
1764 2253 1.687297 CCCCCTTCCCTTAGCGAGAC 61.687 65.000 0.00 0.00 0.00 3.36
1765 2254 1.382695 CCCCCTTCCCTTAGCGAGA 60.383 63.158 0.00 0.00 0.00 4.04
1766 2255 1.272554 AACCCCCTTCCCTTAGCGAG 61.273 60.000 0.00 0.00 0.00 5.03
1767 2256 1.229723 AACCCCCTTCCCTTAGCGA 60.230 57.895 0.00 0.00 0.00 4.93
1768 2257 1.077716 CAACCCCCTTCCCTTAGCG 60.078 63.158 0.00 0.00 0.00 4.26
1769 2258 1.306633 CCAACCCCCTTCCCTTAGC 59.693 63.158 0.00 0.00 0.00 3.09
1770 2259 0.849540 ACCCAACCCCCTTCCCTTAG 60.850 60.000 0.00 0.00 0.00 2.18
1771 2260 0.501934 TACCCAACCCCCTTCCCTTA 59.498 55.000 0.00 0.00 0.00 2.69
1772 2261 0.849540 CTACCCAACCCCCTTCCCTT 60.850 60.000 0.00 0.00 0.00 3.95
1773 2262 1.230182 CTACCCAACCCCCTTCCCT 60.230 63.158 0.00 0.00 0.00 4.20
1774 2263 1.230050 TCTACCCAACCCCCTTCCC 60.230 63.158 0.00 0.00 0.00 3.97
1775 2264 1.279749 CCTCTACCCAACCCCCTTCC 61.280 65.000 0.00 0.00 0.00 3.46
1776 2265 0.549413 ACCTCTACCCAACCCCCTTC 60.549 60.000 0.00 0.00 0.00 3.46
1777 2266 0.103554 AACCTCTACCCAACCCCCTT 60.104 55.000 0.00 0.00 0.00 3.95
1778 2267 0.801574 TAACCTCTACCCAACCCCCT 59.198 55.000 0.00 0.00 0.00 4.79
1779 2268 1.210538 CTAACCTCTACCCAACCCCC 58.789 60.000 0.00 0.00 0.00 5.40
1780 2269 1.210538 CCTAACCTCTACCCAACCCC 58.789 60.000 0.00 0.00 0.00 4.95
1781 2270 1.962558 ACCTAACCTCTACCCAACCC 58.037 55.000 0.00 0.00 0.00 4.11
1782 2271 4.077108 CAAAACCTAACCTCTACCCAACC 58.923 47.826 0.00 0.00 0.00 3.77
1783 2272 4.077108 CCAAAACCTAACCTCTACCCAAC 58.923 47.826 0.00 0.00 0.00 3.77
1784 2273 3.074836 CCCAAAACCTAACCTCTACCCAA 59.925 47.826 0.00 0.00 0.00 4.12
1785 2274 2.645797 CCCAAAACCTAACCTCTACCCA 59.354 50.000 0.00 0.00 0.00 4.51
1786 2275 2.025605 CCCCAAAACCTAACCTCTACCC 60.026 54.545 0.00 0.00 0.00 3.69
1787 2276 2.914941 TCCCCAAAACCTAACCTCTACC 59.085 50.000 0.00 0.00 0.00 3.18
1788 2277 3.586174 ACTCCCCAAAACCTAACCTCTAC 59.414 47.826 0.00 0.00 0.00 2.59
1789 2278 3.878086 ACTCCCCAAAACCTAACCTCTA 58.122 45.455 0.00 0.00 0.00 2.43
1790 2279 2.714808 ACTCCCCAAAACCTAACCTCT 58.285 47.619 0.00 0.00 0.00 3.69
1791 2280 3.154710 CAACTCCCCAAAACCTAACCTC 58.845 50.000 0.00 0.00 0.00 3.85
1792 2281 2.158370 CCAACTCCCCAAAACCTAACCT 60.158 50.000 0.00 0.00 0.00 3.50
1793 2282 2.158430 TCCAACTCCCCAAAACCTAACC 60.158 50.000 0.00 0.00 0.00 2.85
1794 2283 3.232720 TCCAACTCCCCAAAACCTAAC 57.767 47.619 0.00 0.00 0.00 2.34
1795 2284 4.156477 CAATCCAACTCCCCAAAACCTAA 58.844 43.478 0.00 0.00 0.00 2.69
1796 2285 3.501385 CCAATCCAACTCCCCAAAACCTA 60.501 47.826 0.00 0.00 0.00 3.08
1797 2286 2.608623 CAATCCAACTCCCCAAAACCT 58.391 47.619 0.00 0.00 0.00 3.50
1798 2287 1.623311 CCAATCCAACTCCCCAAAACC 59.377 52.381 0.00 0.00 0.00 3.27
1799 2288 1.001974 GCCAATCCAACTCCCCAAAAC 59.998 52.381 0.00 0.00 0.00 2.43
1800 2289 1.347062 GCCAATCCAACTCCCCAAAA 58.653 50.000 0.00 0.00 0.00 2.44
1801 2290 0.544120 GGCCAATCCAACTCCCCAAA 60.544 55.000 0.00 0.00 34.01 3.28
1802 2291 1.078347 GGCCAATCCAACTCCCCAA 59.922 57.895 0.00 0.00 34.01 4.12
1803 2292 2.770130 GGCCAATCCAACTCCCCA 59.230 61.111 0.00 0.00 34.01 4.96
1804 2293 2.440247 CGGCCAATCCAACTCCCC 60.440 66.667 2.24 0.00 34.01 4.81
1805 2294 1.452108 CTCGGCCAATCCAACTCCC 60.452 63.158 2.24 0.00 34.01 4.30
1806 2295 0.462759 CTCTCGGCCAATCCAACTCC 60.463 60.000 2.24 0.00 34.01 3.85
1807 2296 0.462759 CCTCTCGGCCAATCCAACTC 60.463 60.000 2.24 0.00 34.01 3.01
1808 2297 1.201429 ACCTCTCGGCCAATCCAACT 61.201 55.000 2.24 0.00 34.01 3.16
1809 2298 1.026718 CACCTCTCGGCCAATCCAAC 61.027 60.000 2.24 0.00 34.01 3.77
1810 2299 1.299648 CACCTCTCGGCCAATCCAA 59.700 57.895 2.24 0.00 34.01 3.53
1811 2300 2.989639 CACCTCTCGGCCAATCCA 59.010 61.111 2.24 0.00 34.01 3.41
1812 2301 2.514824 GCACCTCTCGGCCAATCC 60.515 66.667 2.24 0.00 0.00 3.01
1813 2302 2.892425 CGCACCTCTCGGCCAATC 60.892 66.667 2.24 0.00 0.00 2.67
3665 4154 1.204146 GGTACTCTTGAGCATCCCCA 58.796 55.000 0.00 0.00 0.00 4.96
3725 4214 3.252458 GGACATACTTTCGCCTGTTGTTT 59.748 43.478 0.00 0.00 0.00 2.83
3736 4225 6.174720 TCATGGGTGATAGGACATACTTTC 57.825 41.667 0.00 0.00 0.00 2.62
3774 4263 4.234574 CGTCTACATGCTTACACACTTCA 58.765 43.478 0.00 0.00 0.00 3.02
3931 4420 7.985752 ACCGAAAGATAGGTAAGGAGTAAATTG 59.014 37.037 0.00 0.00 39.30 2.32
3984 4473 9.798994 AAGCATGTCTTGAAATTTGATATTCTC 57.201 29.630 0.00 0.00 32.79 2.87
4023 4512 8.028938 GGCATGTGGATTTTATCATGTATTACC 58.971 37.037 0.00 0.00 39.54 2.85
4445 4934 3.318839 TGCTCAATCAAAACTCCCTGTTG 59.681 43.478 0.00 0.00 39.13 3.33
4463 4952 8.638685 AATGCAACTAAATTATTGACATGCTC 57.361 30.769 0.00 0.00 32.74 4.26
4467 4956 8.199449 CCAGGAATGCAACTAAATTATTGACAT 58.801 33.333 0.00 2.86 0.00 3.06
4471 4960 7.546358 TCACCAGGAATGCAACTAAATTATTG 58.454 34.615 0.00 0.00 0.00 1.90
4472 4961 7.397192 ACTCACCAGGAATGCAACTAAATTATT 59.603 33.333 0.00 0.00 0.00 1.40
4475 4964 5.079643 ACTCACCAGGAATGCAACTAAATT 58.920 37.500 0.00 0.00 0.00 1.82
4476 4965 4.666512 ACTCACCAGGAATGCAACTAAAT 58.333 39.130 0.00 0.00 0.00 1.40
4484 4973 3.265791 CTTCAGTACTCACCAGGAATGC 58.734 50.000 0.00 0.00 27.63 3.56
4496 4985 2.166664 GCTCCACGATTCCTTCAGTACT 59.833 50.000 0.00 0.00 0.00 2.73
4497 4986 2.166664 AGCTCCACGATTCCTTCAGTAC 59.833 50.000 0.00 0.00 0.00 2.73
4526 5015 2.865308 CACATGTGACCAGCGCTG 59.135 61.111 30.52 30.52 0.00 5.18
4530 5019 2.358615 TCCGCACATGTGACCAGC 60.359 61.111 29.80 12.47 0.00 4.85
4531 5020 2.382746 CGTCCGCACATGTGACCAG 61.383 63.158 29.80 15.54 0.00 4.00
4538 5027 0.095245 GTGAACATCGTCCGCACATG 59.905 55.000 0.00 0.00 0.00 3.21
4561 5050 0.725117 CCGGTAAACGCTCATGGAAC 59.275 55.000 0.00 0.00 42.52 3.62
4567 5056 1.888018 CTCCTCCGGTAAACGCTCA 59.112 57.895 0.00 0.00 42.52 4.26
4609 5098 3.102972 CTCCATTCTCCTCTCCACAAGA 58.897 50.000 0.00 0.00 0.00 3.02
4632 5121 4.037927 TCTCCCTTTGGATCTACGGATTT 58.962 43.478 0.00 0.00 40.80 2.17
4699 5188 4.775236 ACAGGAGAAAGAGTATCCAATGC 58.225 43.478 0.00 0.00 35.45 3.56
4743 5232 0.108945 GGTTGCCAAATCAGAGCTGC 60.109 55.000 0.00 0.00 0.00 5.25
4814 5303 2.777692 TCCCCCATATCAAGAACTGGTC 59.222 50.000 0.00 0.00 0.00 4.02
4821 5310 3.542969 TCTCGATCCCCCATATCAAGA 57.457 47.619 0.00 0.00 0.00 3.02
4835 5324 0.972883 GGGGCAGCTATCTTCTCGAT 59.027 55.000 0.00 0.00 36.11 3.59
4837 5326 0.465705 TTGGGGCAGCTATCTTCTCG 59.534 55.000 0.00 0.00 0.00 4.04
4856 5345 3.685139 AACCACGAACATCATCAGAGT 57.315 42.857 0.00 0.00 0.00 3.24
4871 5360 1.686052 TGATTTCACAGCCCAAACCAC 59.314 47.619 0.00 0.00 0.00 4.16
4932 5422 6.385033 AGAAGAAAGTTTGCTGTATCATTGC 58.615 36.000 0.00 0.00 0.00 3.56
4940 5430 4.702131 ACTGTTGAGAAGAAAGTTTGCTGT 59.298 37.500 0.00 0.00 0.00 4.40
4955 5445 5.866633 AGCTTATCTTCGAAAGACTGTTGAG 59.133 40.000 0.00 0.00 41.01 3.02
5010 5500 1.434696 CCCCACAAGATGCGATTGC 59.565 57.895 0.00 0.00 43.20 3.56
5022 5512 1.367346 TGAAAGAGTATGCCCCCACA 58.633 50.000 0.00 0.00 0.00 4.17
5033 5523 5.796424 AAATCCACAGCAAATGAAAGAGT 57.204 34.783 0.00 0.00 0.00 3.24
5034 5524 5.987347 ACAAAATCCACAGCAAATGAAAGAG 59.013 36.000 0.00 0.00 0.00 2.85
5036 5526 5.107760 CGACAAAATCCACAGCAAATGAAAG 60.108 40.000 0.00 0.00 0.00 2.62
5038 5528 4.297510 CGACAAAATCCACAGCAAATGAA 58.702 39.130 0.00 0.00 0.00 2.57
5053 5543 6.206634 ACAGAAGAAATATTGCTCCGACAAAA 59.793 34.615 0.00 0.00 32.27 2.44
5068 5558 9.101655 CAGAAACCATTTTTGAACAGAAGAAAT 57.898 29.630 0.00 0.00 0.00 2.17
5171 5661 3.069872 ACACACGAAGTATACCACAACCA 59.930 43.478 0.00 0.00 41.61 3.67
5235 5726 5.877012 AGTGATACAGATCGCAACAAATCTT 59.123 36.000 1.70 0.00 43.82 2.40
5275 5766 5.900437 AGGATGGATATGATGCCAAAGATT 58.100 37.500 0.00 0.00 37.78 2.40
5558 8195 9.856488 ATGAAATTCAATCAAAGACAGAAGATG 57.144 29.630 0.00 0.00 0.00 2.90
5781 8427 3.708403 AGAAGGAGAACATGCATGACA 57.292 42.857 32.75 0.00 0.00 3.58
5789 8435 5.069781 GGTAGCATCAGTAGAAGGAGAACAT 59.930 44.000 0.00 0.00 0.00 2.71
5790 8436 4.402793 GGTAGCATCAGTAGAAGGAGAACA 59.597 45.833 0.00 0.00 0.00 3.18
5791 8437 4.202172 GGGTAGCATCAGTAGAAGGAGAAC 60.202 50.000 0.00 0.00 0.00 3.01
5792 8438 3.961408 GGGTAGCATCAGTAGAAGGAGAA 59.039 47.826 0.00 0.00 0.00 2.87
5793 8439 3.205507 AGGGTAGCATCAGTAGAAGGAGA 59.794 47.826 0.00 0.00 0.00 3.71
5794 8440 3.320541 CAGGGTAGCATCAGTAGAAGGAG 59.679 52.174 0.00 0.00 0.00 3.69
5795 8441 3.300388 CAGGGTAGCATCAGTAGAAGGA 58.700 50.000 0.00 0.00 0.00 3.36
6147 8797 8.421002 GGGCAGGATATAAAGATTAGAGAGATC 58.579 40.741 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.