Multiple sequence alignment - TraesCS2B01G585400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G585400 chr2B 100.000 5609 0 0 1 5609 772213811 772219419 0.000000e+00 10358.0
1 TraesCS2B01G585400 chr2B 95.833 288 12 0 308 595 91177036 91176749 3.060000e-127 466.0
2 TraesCS2B01G585400 chr2B 95.833 288 12 0 309 596 140150056 140150343 3.060000e-127 466.0
3 TraesCS2B01G585400 chr2B 94.915 295 13 2 306 598 583409709 583410003 1.420000e-125 460.0
4 TraesCS2B01G585400 chr2B 90.244 205 9 4 5413 5609 772449431 772449632 2.000000e-64 257.0
5 TraesCS2B01G585400 chr2B 90.625 96 4 2 622 716 772209611 772209702 7.630000e-24 122.0
6 TraesCS2B01G585400 chr2A 88.617 3971 274 77 729 4614 758950333 758954210 0.000000e+00 4665.0
7 TraesCS2B01G585400 chr2A 89.867 602 41 8 4721 5310 758954986 758955579 0.000000e+00 756.0
8 TraesCS2B01G585400 chr2A 90.354 311 25 4 1 311 758949858 758950163 2.430000e-108 403.0
9 TraesCS2B01G585400 chr2A 87.108 287 21 7 5333 5609 758955633 758955913 1.520000e-80 311.0
10 TraesCS2B01G585400 chr2A 82.581 310 43 9 4 311 758945059 758945359 4.310000e-66 263.0
11 TraesCS2B01G585400 chr2A 78.041 296 29 16 622 906 758945409 758945679 2.710000e-33 154.0
12 TraesCS2B01G585400 chr2A 88.800 125 9 2 592 716 758950160 758950279 1.260000e-31 148.0
13 TraesCS2B01G585400 chr2A 89.796 98 9 1 4628 4725 758954856 758954952 2.120000e-24 124.0
14 TraesCS2B01G585400 chr2D 92.387 1550 79 22 1102 2625 629392121 629393657 0.000000e+00 2172.0
15 TraesCS2B01G585400 chr2D 85.875 1515 117 42 3094 4574 629394406 629395857 0.000000e+00 1522.0
16 TraesCS2B01G585400 chr2D 90.759 909 46 19 4721 5606 629438970 629439863 0.000000e+00 1179.0
17 TraesCS2B01G585400 chr2D 95.270 296 11 3 302 596 540821221 540821514 3.060000e-127 466.0
18 TraesCS2B01G585400 chr2D 93.980 299 17 1 4327 4624 629438507 629438805 8.570000e-123 451.0
19 TraesCS2B01G585400 chr2D 85.778 450 26 10 657 1106 629391677 629392088 5.160000e-120 442.0
20 TraesCS2B01G585400 chr2D 86.897 290 20 11 5330 5609 629396470 629396751 5.460000e-80 309.0
21 TraesCS2B01G585400 chr2D 81.350 311 44 10 7 311 629388312 629388614 2.020000e-59 241.0
22 TraesCS2B01G585400 chr2D 86.047 215 20 9 4 212 629391275 629391485 7.310000e-54 222.0
23 TraesCS2B01G585400 chr2D 93.000 100 6 1 4626 4725 629438838 629438936 1.630000e-30 145.0
24 TraesCS2B01G585400 chr2D 87.603 121 13 1 5205 5323 629396294 629396414 7.580000e-29 139.0
25 TraesCS2B01G585400 chr2D 77.992 259 25 11 654 901 629388690 629388927 3.530000e-27 134.0
26 TraesCS2B01G585400 chr2D 96.296 54 2 0 4751 4804 352947878 352947825 7.740000e-14 89.8
27 TraesCS2B01G585400 chr2D 92.593 54 2 2 4756 4807 316121751 316121698 6.030000e-10 76.8
28 TraesCS2B01G585400 chr3B 82.848 1271 167 36 1420 2687 53556272 53555050 0.000000e+00 1092.0
29 TraesCS2B01G585400 chr3B 96.575 292 9 1 308 599 17350573 17350283 3.040000e-132 483.0
30 TraesCS2B01G585400 chr3B 95.205 292 14 0 310 601 94663768 94663477 3.960000e-126 462.0
31 TraesCS2B01G585400 chr3B 77.377 610 112 18 3951 4539 53554231 53553627 6.960000e-89 339.0
32 TraesCS2B01G585400 chr3A 83.526 1214 149 32 1420 2624 44248246 44247075 0.000000e+00 1086.0
33 TraesCS2B01G585400 chr3D 81.354 1019 148 32 1420 2435 31056252 31055273 0.000000e+00 791.0
34 TraesCS2B01G585400 chr7A 90.511 548 45 1 2035 2582 640641280 640641820 0.000000e+00 717.0
35 TraesCS2B01G585400 chr7A 90.116 172 16 1 1873 2044 640639969 640640139 7.310000e-54 222.0
36 TraesCS2B01G585400 chr7B 88.533 593 24 16 2759 3337 76453726 76454288 0.000000e+00 678.0
37 TraesCS2B01G585400 chr7B 94.118 51 3 0 4753 4803 213467979 213467929 1.680000e-10 78.7
38 TraesCS2B01G585400 chr1B 96.552 290 8 2 305 592 638037102 638037391 3.930000e-131 479.0
39 TraesCS2B01G585400 chr6B 95.254 295 14 0 305 599 664743925 664744219 8.510000e-128 468.0
40 TraesCS2B01G585400 chr7D 95.833 288 11 1 308 595 585392188 585392474 1.100000e-126 464.0
41 TraesCS2B01G585400 chr7D 91.379 58 5 0 4751 4808 161541296 161541239 4.660000e-11 80.5
42 TraesCS2B01G585400 chr7D 86.111 72 4 4 4731 4797 613870703 613870633 7.790000e-09 73.1
43 TraesCS2B01G585400 chr1D 97.872 47 1 0 4751 4797 478855027 478854981 1.300000e-11 82.4
44 TraesCS2B01G585400 chr6D 91.071 56 5 0 4753 4808 293177281 293177226 6.030000e-10 76.8
45 TraesCS2B01G585400 chr4B 92.857 42 3 0 4624 4665 215924742 215924783 1.690000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G585400 chr2B 772213811 772219419 5608 False 10358.000000 10358 100.000000 1 5609 1 chr2B.!!$F4 5608
1 TraesCS2B01G585400 chr2A 758949858 758955913 6055 False 1067.833333 4665 89.090333 1 5609 6 chr2A.!!$F2 5608
2 TraesCS2B01G585400 chr2A 758945059 758945679 620 False 208.500000 263 80.311000 4 906 2 chr2A.!!$F1 902
3 TraesCS2B01G585400 chr2D 629388312 629396751 8439 False 647.625000 2172 85.491125 4 5609 8 chr2D.!!$F2 5605
4 TraesCS2B01G585400 chr2D 629438507 629439863 1356 False 591.666667 1179 92.579667 4327 5606 3 chr2D.!!$F3 1279
5 TraesCS2B01G585400 chr3B 53553627 53556272 2645 True 715.500000 1092 80.112500 1420 4539 2 chr3B.!!$R3 3119
6 TraesCS2B01G585400 chr3A 44247075 44248246 1171 True 1086.000000 1086 83.526000 1420 2624 1 chr3A.!!$R1 1204
7 TraesCS2B01G585400 chr3D 31055273 31056252 979 True 791.000000 791 81.354000 1420 2435 1 chr3D.!!$R1 1015
8 TraesCS2B01G585400 chr7A 640639969 640641820 1851 False 469.500000 717 90.313500 1873 2582 2 chr7A.!!$F1 709
9 TraesCS2B01G585400 chr7B 76453726 76454288 562 False 678.000000 678 88.533000 2759 3337 1 chr7B.!!$F1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.033503 TGGACTGGCTATGGAGACGA 60.034 55.0 0.00 0.0 30.54 4.20 F
756 842 0.322277 AGCATCTTCCTGCACAGTGG 60.322 55.0 1.84 0.0 44.77 4.00 F
1414 4540 0.319813 GATTGGTTGCTTGGCGCTTT 60.320 50.0 7.64 0.0 40.11 3.51 F
2617 6912 0.103208 GCACTGGACATCTACCTCGG 59.897 60.0 0.00 0.0 0.00 4.63 F
3480 8275 1.210870 CAACACATGTTTGGCAGCAC 58.789 50.0 0.00 0.0 35.83 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1247 4346 0.031585 CTCGACGTGGGAGACAACAA 59.968 55.0 7.30 0.00 33.27 2.83 R
1808 4943 0.246086 CCGAGAGCAGCTTCTCTTGT 59.754 55.0 23.85 1.92 43.05 3.16 R
3092 7862 0.302890 CTCTATTCGGCTGCTTTGCG 59.697 55.0 0.00 0.00 0.00 4.85 R
3642 8457 0.765510 ACAGAAAGCGGAGGAAGGTT 59.234 50.0 0.00 0.00 0.00 3.50 R
5345 11041 0.034059 CGGCCATCATAGTCCCAGAC 59.966 60.0 2.24 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 2.932614 GACAGTTCCAAGATCACGGATG 59.067 50.000 4.13 3.85 0.00 3.51
91 92 2.024868 TCGCCGATGTGACAAACCG 61.025 57.895 0.00 0.00 0.00 4.44
102 103 3.322254 TGTGACAAACCGGGCATAATTTT 59.678 39.130 6.32 0.00 0.00 1.82
114 115 4.694982 GGGCATAATTTTGGTTTTGGACTG 59.305 41.667 0.00 0.00 0.00 3.51
117 118 5.550290 CATAATTTTGGTTTTGGACTGGCT 58.450 37.500 0.00 0.00 0.00 4.75
126 127 0.824109 TTGGACTGGCTATGGAGACG 59.176 55.000 0.00 0.00 30.54 4.18
127 128 0.033503 TGGACTGGCTATGGAGACGA 60.034 55.000 0.00 0.00 30.54 4.20
205 208 0.923403 CGGAGTACATGTGTCATGCG 59.077 55.000 9.11 4.85 0.00 4.73
212 215 1.926510 ACATGTGTCATGCGATGTACG 59.073 47.619 0.00 0.00 45.66 3.67
229 232 1.377333 CGGAGGCTCAGTTTTCCCC 60.377 63.158 17.69 0.00 0.00 4.81
231 234 1.377333 GAGGCTCAGTTTTCCCCCG 60.377 63.158 10.25 0.00 0.00 5.73
271 278 5.641636 GGCAGGTTTTCTTTTTCAGTTTTGA 59.358 36.000 0.00 0.00 0.00 2.69
290 297 2.928757 TGAAAAACAGTGTTGCATGCAC 59.071 40.909 22.58 16.00 37.13 4.57
311 318 1.142465 AGCATGTCTGGCCAGATTAGG 59.858 52.381 37.07 28.74 39.97 2.69
321 328 1.767759 CCAGATTAGGCCCTGTTTGG 58.232 55.000 0.00 0.00 0.00 3.28
322 329 1.005924 CCAGATTAGGCCCTGTTTGGT 59.994 52.381 0.00 0.00 0.00 3.67
323 330 2.557452 CCAGATTAGGCCCTGTTTGGTT 60.557 50.000 0.00 0.00 0.00 3.67
324 331 2.755103 CAGATTAGGCCCTGTTTGGTTC 59.245 50.000 0.00 0.00 0.00 3.62
325 332 2.378547 AGATTAGGCCCTGTTTGGTTCA 59.621 45.455 0.00 0.00 0.00 3.18
326 333 2.990740 TTAGGCCCTGTTTGGTTCAT 57.009 45.000 0.00 0.00 0.00 2.57
327 334 4.229582 AGATTAGGCCCTGTTTGGTTCATA 59.770 41.667 0.00 0.00 0.00 2.15
328 335 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
329 336 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
330 337 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
331 338 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
332 339 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
333 340 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
334 341 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
335 342 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
336 343 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
337 344 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
338 345 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
368 375 9.720769 TTTTAGTCCCAACTTATAAGTCTCAAG 57.279 33.333 18.28 6.66 38.57 3.02
369 376 6.936968 AGTCCCAACTTATAAGTCTCAAGT 57.063 37.500 18.28 5.74 38.57 3.16
370 377 6.937392 AGTCCCAACTTATAAGTCTCAAGTC 58.063 40.000 18.28 6.78 38.57 3.01
371 378 6.070710 AGTCCCAACTTATAAGTCTCAAGTCC 60.071 42.308 18.28 3.21 38.57 3.85
372 379 5.189145 TCCCAACTTATAAGTCTCAAGTCCC 59.811 44.000 18.28 0.00 38.57 4.46
373 380 5.189934 CCCAACTTATAAGTCTCAAGTCCCT 59.810 44.000 18.28 0.00 38.57 4.20
374 381 6.383147 CCCAACTTATAAGTCTCAAGTCCCTA 59.617 42.308 18.28 0.00 38.57 3.53
375 382 7.093024 CCCAACTTATAAGTCTCAAGTCCCTAA 60.093 40.741 18.28 0.00 38.57 2.69
376 383 8.319146 CCAACTTATAAGTCTCAAGTCCCTAAA 58.681 37.037 18.28 0.00 38.57 1.85
377 384 9.720769 CAACTTATAAGTCTCAAGTCCCTAAAA 57.279 33.333 18.28 0.00 38.57 1.52
379 386 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
380 387 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
381 388 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
382 389 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
383 390 4.041815 AGTCTCAAGTCCCTAAAAAGTCCC 59.958 45.833 0.00 0.00 0.00 4.46
384 391 4.041815 GTCTCAAGTCCCTAAAAAGTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
385 392 5.247792 GTCTCAAGTCCCTAAAAAGTCCCTA 59.752 44.000 0.00 0.00 0.00 3.53
386 393 5.247792 TCTCAAGTCCCTAAAAAGTCCCTAC 59.752 44.000 0.00 0.00 0.00 3.18
387 394 4.287845 TCAAGTCCCTAAAAAGTCCCTACC 59.712 45.833 0.00 0.00 0.00 3.18
388 395 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
389 396 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
390 397 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
391 398 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
392 399 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
393 400 4.765339 CCCTAAAAAGTCCCTACCTGTTTG 59.235 45.833 0.00 0.00 0.00 2.93
394 401 4.765339 CCTAAAAAGTCCCTACCTGTTTGG 59.235 45.833 0.00 0.00 42.93 3.28
405 412 2.364972 CCTGTTTGGTTTCTGGGACT 57.635 50.000 0.00 0.00 0.00 3.85
406 413 2.666317 CCTGTTTGGTTTCTGGGACTT 58.334 47.619 0.00 0.00 0.00 3.01
407 414 3.827722 CCTGTTTGGTTTCTGGGACTTA 58.172 45.455 0.00 0.00 0.00 2.24
408 415 4.407365 CCTGTTTGGTTTCTGGGACTTAT 58.593 43.478 0.00 0.00 0.00 1.73
409 416 5.566469 CCTGTTTGGTTTCTGGGACTTATA 58.434 41.667 0.00 0.00 0.00 0.98
410 417 6.007703 CCTGTTTGGTTTCTGGGACTTATAA 58.992 40.000 0.00 0.00 0.00 0.98
411 418 6.151144 CCTGTTTGGTTTCTGGGACTTATAAG 59.849 42.308 11.05 11.05 0.00 1.73
412 419 6.607019 TGTTTGGTTTCTGGGACTTATAAGT 58.393 36.000 18.05 18.05 43.16 2.24
445 452 9.490083 AAGACTATATTACAACTACAAGTCCCT 57.510 33.333 0.00 0.00 34.10 4.20
453 460 6.541934 ACAACTACAAGTCCCTATAAGTCC 57.458 41.667 0.00 0.00 0.00 3.85
454 461 5.424573 ACAACTACAAGTCCCTATAAGTCCC 59.575 44.000 0.00 0.00 0.00 4.46
455 462 5.484734 ACTACAAGTCCCTATAAGTCCCT 57.515 43.478 0.00 0.00 0.00 4.20
456 463 5.456779 ACTACAAGTCCCTATAAGTCCCTC 58.543 45.833 0.00 0.00 0.00 4.30
457 464 3.655384 ACAAGTCCCTATAAGTCCCTCC 58.345 50.000 0.00 0.00 0.00 4.30
458 465 3.013648 ACAAGTCCCTATAAGTCCCTCCA 59.986 47.826 0.00 0.00 0.00 3.86
459 466 4.235372 CAAGTCCCTATAAGTCCCTCCAT 58.765 47.826 0.00 0.00 0.00 3.41
460 467 3.863086 AGTCCCTATAAGTCCCTCCATG 58.137 50.000 0.00 0.00 0.00 3.66
461 468 3.471306 AGTCCCTATAAGTCCCTCCATGA 59.529 47.826 0.00 0.00 0.00 3.07
462 469 3.835395 GTCCCTATAAGTCCCTCCATGAG 59.165 52.174 0.00 0.00 0.00 2.90
463 470 3.732742 TCCCTATAAGTCCCTCCATGAGA 59.267 47.826 0.00 0.00 0.00 3.27
464 471 4.093011 CCCTATAAGTCCCTCCATGAGAG 58.907 52.174 0.00 0.00 42.83 3.20
465 472 4.449968 CCCTATAAGTCCCTCCATGAGAGT 60.450 50.000 0.00 0.00 41.47 3.24
466 473 4.770010 CCTATAAGTCCCTCCATGAGAGTC 59.230 50.000 0.00 0.00 41.47 3.36
467 474 2.938428 AAGTCCCTCCATGAGAGTCT 57.062 50.000 0.00 0.00 41.47 3.24
468 475 2.938428 AGTCCCTCCATGAGAGTCTT 57.062 50.000 0.00 0.00 41.47 3.01
469 476 2.465813 AGTCCCTCCATGAGAGTCTTG 58.534 52.381 0.00 0.00 41.47 3.02
470 477 2.183679 GTCCCTCCATGAGAGTCTTGT 58.816 52.381 0.00 0.00 41.47 3.16
471 478 2.569404 GTCCCTCCATGAGAGTCTTGTT 59.431 50.000 0.00 0.00 41.47 2.83
472 479 3.008485 GTCCCTCCATGAGAGTCTTGTTT 59.992 47.826 0.00 0.00 41.47 2.83
473 480 3.652869 TCCCTCCATGAGAGTCTTGTTTT 59.347 43.478 0.00 0.00 41.47 2.43
474 481 4.844085 TCCCTCCATGAGAGTCTTGTTTTA 59.156 41.667 0.00 0.00 41.47 1.52
475 482 5.488919 TCCCTCCATGAGAGTCTTGTTTTAT 59.511 40.000 0.00 0.00 41.47 1.40
476 483 6.672218 TCCCTCCATGAGAGTCTTGTTTTATA 59.328 38.462 0.00 0.00 41.47 0.98
477 484 7.182026 TCCCTCCATGAGAGTCTTGTTTTATAA 59.818 37.037 0.00 0.00 41.47 0.98
478 485 7.497249 CCCTCCATGAGAGTCTTGTTTTATAAG 59.503 40.741 0.00 0.00 41.47 1.73
479 486 8.043710 CCTCCATGAGAGTCTTGTTTTATAAGT 58.956 37.037 0.00 0.00 41.47 2.24
480 487 9.092876 CTCCATGAGAGTCTTGTTTTATAAGTC 57.907 37.037 0.00 0.00 37.87 3.01
481 488 8.041323 TCCATGAGAGTCTTGTTTTATAAGTCC 58.959 37.037 0.00 0.00 0.00 3.85
482 489 7.281100 CCATGAGAGTCTTGTTTTATAAGTCCC 59.719 40.741 0.00 0.00 0.00 4.46
483 490 7.311092 TGAGAGTCTTGTTTTATAAGTCCCA 57.689 36.000 0.00 0.00 0.00 4.37
484 491 7.741785 TGAGAGTCTTGTTTTATAAGTCCCAA 58.258 34.615 0.00 0.00 0.00 4.12
485 492 8.215050 TGAGAGTCTTGTTTTATAAGTCCCAAA 58.785 33.333 0.00 0.00 0.00 3.28
486 493 9.232473 GAGAGTCTTGTTTTATAAGTCCCAAAT 57.768 33.333 0.00 0.00 0.00 2.32
487 494 9.014297 AGAGTCTTGTTTTATAAGTCCCAAATG 57.986 33.333 0.00 0.00 0.00 2.32
488 495 7.602753 AGTCTTGTTTTATAAGTCCCAAATGC 58.397 34.615 0.00 0.00 0.00 3.56
489 496 6.811665 GTCTTGTTTTATAAGTCCCAAATGCC 59.188 38.462 0.00 0.00 0.00 4.40
490 497 5.669164 TGTTTTATAAGTCCCAAATGCCC 57.331 39.130 0.00 0.00 0.00 5.36
491 498 5.087323 TGTTTTATAAGTCCCAAATGCCCA 58.913 37.500 0.00 0.00 0.00 5.36
492 499 5.046950 TGTTTTATAAGTCCCAAATGCCCAC 60.047 40.000 0.00 0.00 0.00 4.61
493 500 4.601406 TTATAAGTCCCAAATGCCCACT 57.399 40.909 0.00 0.00 0.00 4.00
494 501 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
495 502 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
496 503 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
497 504 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
498 505 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
499 506 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
500 507 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
501 508 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
502 509 2.233676 CCAAATGCCCACTTTAAGTCCC 59.766 50.000 0.00 0.00 0.00 4.46
503 510 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
504 511 4.340617 CAAATGCCCACTTTAAGTCCCTA 58.659 43.478 0.00 0.00 0.00 3.53
505 512 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
506 513 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
507 514 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
508 515 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
509 516 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
510 517 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
511 518 5.686913 GCCCACTTTAAGTCCCTATAAGTCC 60.687 48.000 0.00 0.00 0.00 3.85
512 519 5.163227 CCCACTTTAAGTCCCTATAAGTCCC 60.163 48.000 0.00 0.00 0.00 4.46
513 520 5.666265 CCACTTTAAGTCCCTATAAGTCCCT 59.334 44.000 0.00 0.00 0.00 4.20
514 521 6.183360 CCACTTTAAGTCCCTATAAGTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
515 522 5.904169 ACTTTAAGTCCCTATAAGTCCCTCC 59.096 44.000 0.00 0.00 0.00 4.30
516 523 5.763239 TTAAGTCCCTATAAGTCCCTCCT 57.237 43.478 0.00 0.00 0.00 3.69
517 524 3.621682 AGTCCCTATAAGTCCCTCCTG 57.378 52.381 0.00 0.00 0.00 3.86
518 525 2.866454 AGTCCCTATAAGTCCCTCCTGT 59.134 50.000 0.00 0.00 0.00 4.00
519 526 3.275228 AGTCCCTATAAGTCCCTCCTGTT 59.725 47.826 0.00 0.00 0.00 3.16
520 527 4.038633 GTCCCTATAAGTCCCTCCTGTTT 58.961 47.826 0.00 0.00 0.00 2.83
521 528 4.037927 TCCCTATAAGTCCCTCCTGTTTG 58.962 47.826 0.00 0.00 0.00 2.93
522 529 3.136626 CCCTATAAGTCCCTCCTGTTTGG 59.863 52.174 0.00 0.00 37.10 3.28
523 530 3.780850 CCTATAAGTCCCTCCTGTTTGGT 59.219 47.826 0.00 0.00 37.07 3.67
524 531 4.227527 CCTATAAGTCCCTCCTGTTTGGTT 59.772 45.833 0.00 0.00 37.07 3.67
525 532 4.741928 ATAAGTCCCTCCTGTTTGGTTT 57.258 40.909 0.00 0.00 37.07 3.27
526 533 5.853572 ATAAGTCCCTCCTGTTTGGTTTA 57.146 39.130 0.00 0.00 37.07 2.01
527 534 3.790089 AGTCCCTCCTGTTTGGTTTAG 57.210 47.619 0.00 0.00 37.07 1.85
528 535 3.323775 AGTCCCTCCTGTTTGGTTTAGA 58.676 45.455 0.00 0.00 37.07 2.10
529 536 3.916989 AGTCCCTCCTGTTTGGTTTAGAT 59.083 43.478 0.00 0.00 37.07 1.98
530 537 4.010349 GTCCCTCCTGTTTGGTTTAGATG 58.990 47.826 0.00 0.00 37.07 2.90
531 538 3.010138 TCCCTCCTGTTTGGTTTAGATGG 59.990 47.826 0.00 0.00 37.07 3.51
532 539 3.356290 CCTCCTGTTTGGTTTAGATGGG 58.644 50.000 0.00 0.00 37.07 4.00
533 540 3.010138 CCTCCTGTTTGGTTTAGATGGGA 59.990 47.826 0.00 0.00 37.07 4.37
534 541 4.010349 CTCCTGTTTGGTTTAGATGGGAC 58.990 47.826 0.00 0.00 37.07 4.46
535 542 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
536 543 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
537 544 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
538 545 6.011981 TCCTGTTTGGTTTAGATGGGACTTAT 60.012 38.462 0.00 0.00 37.07 1.73
539 546 7.183112 TCCTGTTTGGTTTAGATGGGACTTATA 59.817 37.037 0.00 0.00 37.07 0.98
540 547 7.499232 CCTGTTTGGTTTAGATGGGACTTATAG 59.501 40.741 0.00 0.00 0.00 1.31
541 548 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
542 549 6.509523 TTGGTTTAGATGGGACTTATAGGG 57.490 41.667 0.00 0.00 0.00 3.53
543 550 5.795079 TGGTTTAGATGGGACTTATAGGGA 58.205 41.667 0.00 0.00 0.00 4.20
544 551 5.605488 TGGTTTAGATGGGACTTATAGGGAC 59.395 44.000 0.00 0.00 0.00 4.46
545 552 5.845065 GGTTTAGATGGGACTTATAGGGACT 59.155 44.000 0.00 0.00 46.37 3.85
546 553 6.329460 GGTTTAGATGGGACTTATAGGGACTT 59.671 42.308 0.00 0.00 41.75 3.01
547 554 7.147355 GGTTTAGATGGGACTTATAGGGACTTT 60.147 40.741 0.00 0.00 41.75 2.66
548 555 8.272889 GTTTAGATGGGACTTATAGGGACTTTT 58.727 37.037 0.00 0.00 41.75 2.27
549 556 6.910259 AGATGGGACTTATAGGGACTTTTT 57.090 37.500 0.00 0.00 41.75 1.94
571 578 7.933215 TTTTAAGTCCCTAAGCCAATAAGTC 57.067 36.000 0.00 0.00 0.00 3.01
572 579 4.505324 AAGTCCCTAAGCCAATAAGTCC 57.495 45.455 0.00 0.00 0.00 3.85
573 580 2.778270 AGTCCCTAAGCCAATAAGTCCC 59.222 50.000 0.00 0.00 0.00 4.46
574 581 2.778270 GTCCCTAAGCCAATAAGTCCCT 59.222 50.000 0.00 0.00 0.00 4.20
575 582 3.971971 GTCCCTAAGCCAATAAGTCCCTA 59.028 47.826 0.00 0.00 0.00 3.53
576 583 4.040584 GTCCCTAAGCCAATAAGTCCCTAG 59.959 50.000 0.00 0.00 0.00 3.02
577 584 4.078219 TCCCTAAGCCAATAAGTCCCTAGA 60.078 45.833 0.00 0.00 0.00 2.43
578 585 4.658901 CCCTAAGCCAATAAGTCCCTAGAA 59.341 45.833 0.00 0.00 0.00 2.10
579 586 5.132144 CCCTAAGCCAATAAGTCCCTAGAAA 59.868 44.000 0.00 0.00 0.00 2.52
580 587 6.056236 CCTAAGCCAATAAGTCCCTAGAAAC 58.944 44.000 0.00 0.00 0.00 2.78
581 588 5.514500 AAGCCAATAAGTCCCTAGAAACA 57.486 39.130 0.00 0.00 0.00 2.83
582 589 5.514500 AGCCAATAAGTCCCTAGAAACAA 57.486 39.130 0.00 0.00 0.00 2.83
583 590 5.887754 AGCCAATAAGTCCCTAGAAACAAA 58.112 37.500 0.00 0.00 0.00 2.83
584 591 5.710567 AGCCAATAAGTCCCTAGAAACAAAC 59.289 40.000 0.00 0.00 0.00 2.93
585 592 5.475564 GCCAATAAGTCCCTAGAAACAAACA 59.524 40.000 0.00 0.00 0.00 2.83
586 593 6.569801 GCCAATAAGTCCCTAGAAACAAACAC 60.570 42.308 0.00 0.00 0.00 3.32
587 594 6.072119 CCAATAAGTCCCTAGAAACAAACACC 60.072 42.308 0.00 0.00 0.00 4.16
588 595 3.503800 AGTCCCTAGAAACAAACACCC 57.496 47.619 0.00 0.00 0.00 4.61
589 596 3.053826 AGTCCCTAGAAACAAACACCCT 58.946 45.455 0.00 0.00 0.00 4.34
590 597 3.072622 AGTCCCTAGAAACAAACACCCTC 59.927 47.826 0.00 0.00 0.00 4.30
591 598 3.072622 GTCCCTAGAAACAAACACCCTCT 59.927 47.826 0.00 0.00 0.00 3.69
592 599 3.720002 TCCCTAGAAACAAACACCCTCTT 59.280 43.478 0.00 0.00 0.00 2.85
593 600 4.909088 TCCCTAGAAACAAACACCCTCTTA 59.091 41.667 0.00 0.00 0.00 2.10
594 601 5.012768 TCCCTAGAAACAAACACCCTCTTAG 59.987 44.000 0.00 0.00 0.00 2.18
595 602 5.221864 CCCTAGAAACAAACACCCTCTTAGT 60.222 44.000 0.00 0.00 0.00 2.24
596 603 6.013984 CCCTAGAAACAAACACCCTCTTAGTA 60.014 42.308 0.00 0.00 0.00 1.82
597 604 7.447594 CCTAGAAACAAACACCCTCTTAGTAA 58.552 38.462 0.00 0.00 0.00 2.24
598 605 7.603024 CCTAGAAACAAACACCCTCTTAGTAAG 59.397 40.741 3.29 3.29 0.00 2.34
599 606 6.896883 AGAAACAAACACCCTCTTAGTAAGT 58.103 36.000 9.71 0.00 0.00 2.24
600 607 8.026396 AGAAACAAACACCCTCTTAGTAAGTA 57.974 34.615 9.71 0.00 0.00 2.24
601 608 8.148999 AGAAACAAACACCCTCTTAGTAAGTAG 58.851 37.037 9.71 6.18 0.00 2.57
674 719 3.740397 GCACGCCTGCATTGCTCA 61.740 61.111 10.49 0.00 43.62 4.26
744 830 5.416952 CCTGAAATTACCTGTGAAGCATCTT 59.583 40.000 0.00 0.00 0.00 2.40
756 842 0.322277 AGCATCTTCCTGCACAGTGG 60.322 55.000 1.84 0.00 44.77 4.00
776 863 1.266989 GTAAAGTTGAGCCCACACAGC 59.733 52.381 0.00 0.00 0.00 4.40
806 893 6.228995 TGCTCTATTGGATTCACTCATCATC 58.771 40.000 0.00 0.00 0.00 2.92
824 911 0.601046 TCCACAACAGAGCAAGCTCG 60.601 55.000 15.67 12.88 46.90 5.03
826 913 1.302033 ACAACAGAGCAAGCTCGGG 60.302 57.895 22.58 17.60 46.90 5.14
827 914 2.037136 CAACAGAGCAAGCTCGGGG 61.037 63.158 22.58 15.52 46.90 5.73
846 933 0.667184 GCTGGGGCGACATTTTGTTG 60.667 55.000 0.00 0.00 34.88 3.33
918 3977 5.872617 TCAATTACTACTTCAATCACCACCG 59.127 40.000 0.00 0.00 0.00 4.94
937 4003 2.414426 CCGCTCTGATCGATCTCTGATG 60.414 54.545 25.02 14.46 0.00 3.07
938 4004 2.483491 CGCTCTGATCGATCTCTGATGA 59.517 50.000 25.02 12.37 0.00 2.92
939 4005 3.058363 CGCTCTGATCGATCTCTGATGAA 60.058 47.826 25.02 2.45 0.00 2.57
940 4006 4.229096 GCTCTGATCGATCTCTGATGAAC 58.771 47.826 25.02 6.80 0.00 3.18
941 4007 4.797471 CTCTGATCGATCTCTGATGAACC 58.203 47.826 25.02 0.00 0.00 3.62
942 4008 3.571828 TCTGATCGATCTCTGATGAACCC 59.428 47.826 25.02 0.00 0.00 4.11
943 4009 2.630098 TGATCGATCTCTGATGAACCCC 59.370 50.000 25.02 0.00 0.00 4.95
944 4010 2.159179 TCGATCTCTGATGAACCCCA 57.841 50.000 0.00 0.00 0.00 4.96
985 4051 5.813157 GGCACTATAAAGAGTTCAGAGAACC 59.187 44.000 6.29 0.00 0.00 3.62
1044 4110 0.883814 CTGGGAATCATGAGCCGCTC 60.884 60.000 13.81 13.81 0.00 5.03
1045 4111 1.599240 GGGAATCATGAGCCGCTCC 60.599 63.158 17.81 0.90 0.00 4.70
1046 4112 1.599240 GGAATCATGAGCCGCTCCC 60.599 63.158 17.81 6.64 0.00 4.30
1069 4135 2.236395 CGTAGATTTCCCTTCCACTGGT 59.764 50.000 0.00 0.00 0.00 4.00
1095 4161 2.669569 ACATGTCGCTGCACCACC 60.670 61.111 0.00 0.00 0.00 4.61
1096 4162 2.669229 CATGTCGCTGCACCACCA 60.669 61.111 0.00 0.00 0.00 4.17
1097 4163 2.669569 ATGTCGCTGCACCACCAC 60.670 61.111 0.00 0.00 0.00 4.16
1098 4164 3.182590 ATGTCGCTGCACCACCACT 62.183 57.895 0.00 0.00 0.00 4.00
1100 4166 3.233980 TCGCTGCACCACCACTCT 61.234 61.111 0.00 0.00 0.00 3.24
1103 4202 1.743252 GCTGCACCACCACTCTAGC 60.743 63.158 0.00 0.00 0.00 3.42
1127 4226 3.406361 GTGTGCCTGTGACTCGCG 61.406 66.667 0.00 0.00 0.00 5.87
1180 4279 3.959293 TCGCCTCCCGAGATATATTGTA 58.041 45.455 0.00 0.00 41.89 2.41
1181 4280 3.945921 TCGCCTCCCGAGATATATTGTAG 59.054 47.826 0.00 0.00 41.89 2.74
1182 4281 3.489398 CGCCTCCCGAGATATATTGTAGC 60.489 52.174 0.00 0.00 40.02 3.58
1204 4303 2.448705 GCTCCACTTCGCTTCGCTC 61.449 63.158 0.00 0.00 0.00 5.03
1244 4343 2.114616 TGCTTCCATTGGTGGTTTGTT 58.885 42.857 1.86 0.00 46.16 2.83
1245 4344 2.102252 TGCTTCCATTGGTGGTTTGTTC 59.898 45.455 1.86 0.00 46.16 3.18
1246 4345 2.365293 GCTTCCATTGGTGGTTTGTTCT 59.635 45.455 1.86 0.00 46.16 3.01
1247 4346 3.181466 GCTTCCATTGGTGGTTTGTTCTT 60.181 43.478 1.86 0.00 46.16 2.52
1248 4347 4.683129 GCTTCCATTGGTGGTTTGTTCTTT 60.683 41.667 1.86 0.00 46.16 2.52
1249 4348 4.399004 TCCATTGGTGGTTTGTTCTTTG 57.601 40.909 1.86 0.00 46.16 2.77
1250 4349 3.772025 TCCATTGGTGGTTTGTTCTTTGT 59.228 39.130 1.86 0.00 46.16 2.83
1338 4437 1.196012 CTCCTTCTCCACCAGGTACC 58.804 60.000 2.73 2.73 35.89 3.34
1345 4444 1.689273 CTCCACCAGGTACCTATCTGC 59.311 57.143 15.80 0.00 33.09 4.26
1373 4499 5.563842 GTCGCATCGATCAAGAAAATTCTT 58.436 37.500 0.00 2.59 42.23 2.52
1386 4512 7.529880 AAGAAAATTCTTGCAGTTCAGTTTG 57.470 32.000 7.58 0.00 45.27 2.93
1387 4513 6.866480 AGAAAATTCTTGCAGTTCAGTTTGA 58.134 32.000 0.00 0.00 32.55 2.69
1389 4515 8.632679 AGAAAATTCTTGCAGTTCAGTTTGATA 58.367 29.630 0.00 0.00 32.55 2.15
1393 4519 7.692460 TTCTTGCAGTTCAGTTTGATATGAT 57.308 32.000 0.00 0.00 0.00 2.45
1404 4530 7.259882 TCAGTTTGATATGATTGATTGGTTGC 58.740 34.615 0.00 0.00 0.00 4.17
1407 4533 7.762615 AGTTTGATATGATTGATTGGTTGCTTG 59.237 33.333 0.00 0.00 0.00 4.01
1408 4534 6.151663 TGATATGATTGATTGGTTGCTTGG 57.848 37.500 0.00 0.00 0.00 3.61
1409 4535 2.747396 TGATTGATTGGTTGCTTGGC 57.253 45.000 0.00 0.00 0.00 4.52
1410 4536 1.067706 TGATTGATTGGTTGCTTGGCG 60.068 47.619 0.00 0.00 0.00 5.69
1411 4537 0.390209 ATTGATTGGTTGCTTGGCGC 60.390 50.000 0.00 0.00 39.77 6.53
1412 4538 1.462731 TTGATTGGTTGCTTGGCGCT 61.463 50.000 7.64 0.00 40.11 5.92
1413 4539 1.290009 GATTGGTTGCTTGGCGCTT 59.710 52.632 7.64 0.00 40.11 4.68
1414 4540 0.319813 GATTGGTTGCTTGGCGCTTT 60.320 50.000 7.64 0.00 40.11 3.51
1415 4541 0.600782 ATTGGTTGCTTGGCGCTTTG 60.601 50.000 7.64 0.00 40.11 2.77
1416 4542 1.670949 TTGGTTGCTTGGCGCTTTGA 61.671 50.000 7.64 0.00 40.11 2.69
1442 4568 3.112709 GTCGTGTGCGCCTTCTCC 61.113 66.667 4.18 0.00 38.14 3.71
1532 4661 2.125512 GCGGAGGCGTTGATGTCT 60.126 61.111 0.00 0.00 0.00 3.41
1595 4724 2.098233 CGTGGCGCGGTTCTGTTAT 61.098 57.895 13.57 0.00 36.85 1.89
1598 4727 1.743995 GGCGCGGTTCTGTTATGGT 60.744 57.895 8.83 0.00 0.00 3.55
1740 4869 3.736482 GACGACGGGCTCTGCTACG 62.736 68.421 0.00 0.00 35.76 3.51
1826 4961 2.796304 CTACAAGAGAAGCTGCTCTCG 58.204 52.381 25.06 16.88 44.18 4.04
1913 5048 3.102107 CTCGTCCTCGTCGCAGGAG 62.102 68.421 12.04 4.49 43.68 3.69
2617 6912 0.103208 GCACTGGACATCTACCTCGG 59.897 60.000 0.00 0.00 0.00 4.63
2629 6924 5.303845 ACATCTACCTCGGGGTAAGATTAAC 59.696 44.000 16.67 0.00 46.24 2.01
2639 6934 4.156556 GGGGTAAGATTAACAACCGTTTCC 59.843 45.833 0.00 0.00 36.52 3.13
2641 6936 5.474532 GGGTAAGATTAACAACCGTTTCCTT 59.525 40.000 0.00 0.00 36.52 3.36
2644 6939 8.567104 GGTAAGATTAACAACCGTTTCCTTAAA 58.433 33.333 0.00 0.00 36.52 1.52
2659 6954 8.821894 CGTTTCCTTAAATTTTCAAATGTTGGA 58.178 29.630 0.00 0.00 0.00 3.53
2686 6981 9.722056 CTGTATTTTAGGAAAATTCGATTCAGG 57.278 33.333 2.73 0.00 41.16 3.86
2690 6985 8.810652 TTTTAGGAAAATTCGATTCAGGTTTG 57.189 30.769 0.11 0.00 0.00 2.93
2719 7052 6.792250 CAGAAAATATTTCGGATCATACGTGC 59.208 38.462 0.10 0.00 0.00 5.34
2726 7059 2.558359 TCGGATCATACGTGCTCATGAT 59.442 45.455 10.56 10.56 43.03 2.45
2730 7063 4.565962 GGATCATACGTGCTCATGATGATC 59.434 45.833 19.84 19.84 46.39 2.92
2734 7067 5.707298 TCATACGTGCTCATGATGATCTAGA 59.293 40.000 0.00 0.00 0.00 2.43
2768 7105 3.568430 GGGAGGTTAAGAAGTTTGGTGTG 59.432 47.826 0.00 0.00 0.00 3.82
2773 7110 4.158949 GGTTAAGAAGTTTGGTGTGGTTGT 59.841 41.667 0.00 0.00 0.00 3.32
2774 7111 5.336929 GGTTAAGAAGTTTGGTGTGGTTGTT 60.337 40.000 0.00 0.00 0.00 2.83
2951 7302 5.549347 CAGGTTATGAGAGCTGCTTATGAT 58.451 41.667 2.53 0.00 38.19 2.45
3028 7653 9.817365 CTAAACACTTTTCAGTCTGTCAATATG 57.183 33.333 0.00 0.00 0.00 1.78
3042 7667 9.088512 GTCTGTCAATATGACCAAGTTAACTAG 57.911 37.037 8.92 6.29 46.40 2.57
3047 7678 9.613428 TCAATATGACCAAGTTAACTAGGATTG 57.387 33.333 8.92 11.32 0.00 2.67
3052 7683 7.159372 TGACCAAGTTAACTAGGATTGTCTTC 58.841 38.462 8.92 0.76 0.00 2.87
3092 7862 5.298777 TGGTACTAGCTATTCGAGGTCTTTC 59.701 44.000 0.00 0.00 37.09 2.62
3177 7971 3.599412 TGGACTGCGTACCACTTTC 57.401 52.632 0.00 0.00 0.00 2.62
3290 8084 4.024670 AGAGACCACACTAACTACCCATC 58.975 47.826 0.00 0.00 0.00 3.51
3338 8133 3.639094 CCTTATCCTCTCGTCCATTCAGT 59.361 47.826 0.00 0.00 0.00 3.41
3357 8152 2.644299 AGTCACCCAGTCAATCCATTCA 59.356 45.455 0.00 0.00 0.00 2.57
3358 8153 3.012518 GTCACCCAGTCAATCCATTCAG 58.987 50.000 0.00 0.00 0.00 3.02
3364 8159 2.688446 CAGTCAATCCATTCAGCATGCT 59.312 45.455 16.30 16.30 34.76 3.79
3384 8179 7.414873 GCATGCTGAAAATTTCATCTCTGTCTA 60.415 37.037 11.37 0.00 39.30 2.59
3386 8181 8.037382 TGCTGAAAATTTCATCTCTGTCTAAG 57.963 34.615 9.02 0.00 39.30 2.18
3387 8182 7.879677 TGCTGAAAATTTCATCTCTGTCTAAGA 59.120 33.333 9.02 0.00 39.30 2.10
3388 8183 8.891720 GCTGAAAATTTCATCTCTGTCTAAGAT 58.108 33.333 9.02 0.00 39.30 2.40
3394 8189 9.842775 AATTTCATCTCTGTCTAAGATAATGCA 57.157 29.630 0.00 0.00 33.29 3.96
3395 8190 8.654230 TTTCATCTCTGTCTAAGATAATGCAC 57.346 34.615 0.00 0.00 33.29 4.57
3396 8191 7.594351 TCATCTCTGTCTAAGATAATGCACT 57.406 36.000 0.00 0.00 33.29 4.40
3397 8192 8.016301 TCATCTCTGTCTAAGATAATGCACTT 57.984 34.615 0.00 0.00 33.29 3.16
3398 8193 7.924947 TCATCTCTGTCTAAGATAATGCACTTG 59.075 37.037 0.00 0.00 33.29 3.16
3399 8194 6.045318 TCTCTGTCTAAGATAATGCACTTGC 58.955 40.000 0.00 0.00 36.45 4.01
3400 8195 5.982356 TCTGTCTAAGATAATGCACTTGCT 58.018 37.500 2.33 0.00 42.66 3.91
3401 8196 6.409704 TCTGTCTAAGATAATGCACTTGCTT 58.590 36.000 2.33 0.00 42.66 3.91
3402 8197 6.536582 TCTGTCTAAGATAATGCACTTGCTTC 59.463 38.462 2.33 0.00 42.66 3.86
3403 8198 6.172630 TGTCTAAGATAATGCACTTGCTTCA 58.827 36.000 2.33 0.00 42.66 3.02
3404 8199 6.314648 TGTCTAAGATAATGCACTTGCTTCAG 59.685 38.462 2.33 0.00 42.66 3.02
3405 8200 6.536582 GTCTAAGATAATGCACTTGCTTCAGA 59.463 38.462 2.33 0.00 42.66 3.27
3455 8250 1.322442 GGCTCTGCTTTCACCAAGTT 58.678 50.000 0.00 0.00 34.56 2.66
3456 8251 2.158682 TGGCTCTGCTTTCACCAAGTTA 60.159 45.455 0.00 0.00 34.56 2.24
3457 8252 2.226674 GGCTCTGCTTTCACCAAGTTAC 59.773 50.000 0.00 0.00 34.56 2.50
3458 8253 2.878406 GCTCTGCTTTCACCAAGTTACA 59.122 45.455 0.00 0.00 34.56 2.41
3474 8269 6.640499 CCAAGTTACATACAACACATGTTTGG 59.360 38.462 18.59 11.97 43.01 3.28
3480 8275 1.210870 CAACACATGTTTGGCAGCAC 58.789 50.000 0.00 0.00 35.83 4.40
3498 8294 2.031333 GCACTTTCCTCTGCTTGAAGTG 60.031 50.000 9.49 9.49 0.00 3.16
3548 8344 4.389374 TCAGAACTGAGATTTCGCCTTTT 58.611 39.130 0.00 0.00 34.14 2.27
3563 8378 8.785468 TTTCGCCTTTTTGTTATTACTGTTAC 57.215 30.769 0.00 0.00 0.00 2.50
3574 8389 7.942990 TGTTATTACTGTTACCCTTTGTTTGG 58.057 34.615 0.00 0.00 0.00 3.28
3658 8473 1.605753 AACAACCTTCCTCCGCTTTC 58.394 50.000 0.00 0.00 0.00 2.62
3687 8502 4.520874 GCTCTTTCTGCTTTAGTTTCCCTT 59.479 41.667 0.00 0.00 0.00 3.95
3688 8503 5.335269 GCTCTTTCTGCTTTAGTTTCCCTTC 60.335 44.000 0.00 0.00 0.00 3.46
3691 8506 2.635915 TCTGCTTTAGTTTCCCTTCCGA 59.364 45.455 0.00 0.00 0.00 4.55
3763 8578 3.997681 TCTGTTCATCAAACGCCGATAAA 59.002 39.130 0.00 0.00 41.02 1.40
3796 8613 6.929606 AGCTCTTAGTTACTGAATTTGACGTT 59.070 34.615 0.00 0.00 0.00 3.99
3797 8614 7.441458 AGCTCTTAGTTACTGAATTTGACGTTT 59.559 33.333 0.00 0.00 0.00 3.60
3798 8615 8.068380 GCTCTTAGTTACTGAATTTGACGTTTT 58.932 33.333 0.00 0.00 0.00 2.43
3862 8679 8.425703 AGATAAGAGGACCTAGAAGCATTTTAC 58.574 37.037 0.00 0.00 0.00 2.01
3886 8703 6.128729 CGACTGCAAATTTCCAATTTTCAAC 58.871 36.000 0.00 0.00 0.00 3.18
3893 8710 7.588488 GCAAATTTCCAATTTTCAACTGACATG 59.412 33.333 0.00 0.00 0.00 3.21
4012 8832 4.926860 TCTTTGTGAATGTATGCAGTCG 57.073 40.909 6.76 0.00 42.06 4.18
4039 8859 3.432588 CTGACCGTCGAGGAGCGT 61.433 66.667 6.70 0.00 45.00 5.07
4096 8916 2.048222 CTCGAGGCGTGCAAGGAA 60.048 61.111 3.91 0.00 0.00 3.36
4120 8940 4.798682 AGGAACCGGCGGATCCCT 62.799 66.667 40.86 32.29 44.48 4.20
4168 8988 3.057548 CAGCGGCCACTCAATGCA 61.058 61.111 2.24 0.00 0.00 3.96
4170 8990 3.364441 GCGGCCACTCAATGCACA 61.364 61.111 2.24 0.00 0.00 4.57
4213 9033 4.351938 CCGAAGCGGGTCGTGTCA 62.352 66.667 0.00 0.00 44.15 3.58
4244 9067 0.681564 GGAGAAGGAGACGCTGAGGA 60.682 60.000 0.00 0.00 0.00 3.71
4457 9298 2.488204 GCTCTTGCCTCTTTTCTCCT 57.512 50.000 0.00 0.00 0.00 3.69
4459 9300 3.944087 GCTCTTGCCTCTTTTCTCCTTA 58.056 45.455 0.00 0.00 0.00 2.69
4485 9330 7.397892 TGATCCTTTTGTACAGTTGTTTTGA 57.602 32.000 0.00 0.00 0.00 2.69
4521 9366 2.514205 GCTTGTGCCTTGTTGATTGT 57.486 45.000 0.00 0.00 0.00 2.71
4533 9378 6.514870 GCCTTGTTGATTGTTGATTGTGAGTA 60.515 38.462 0.00 0.00 0.00 2.59
4541 9386 1.017177 TGATTGTGAGTAACGCGGGC 61.017 55.000 12.47 0.00 0.00 6.13
4634 10228 7.727578 AAATACCCCCGATTTAGTTCAAAAT 57.272 32.000 0.00 0.00 0.00 1.82
4641 10235 5.567534 CCCGATTTAGTTCAAAATTGTGACG 59.432 40.000 0.00 0.00 31.02 4.35
4657 10251 3.192422 TGTGACGCTTATTTTGGATTGGG 59.808 43.478 0.00 0.00 0.00 4.12
4707 10301 6.489361 CAGTATAGATAACACGGTACTCCCTT 59.511 42.308 0.00 0.00 0.00 3.95
4850 10484 3.924073 TCAATACAAACGACCGTCATGAG 59.076 43.478 0.00 0.00 0.00 2.90
4851 10485 3.587797 ATACAAACGACCGTCATGAGT 57.412 42.857 0.00 0.00 0.00 3.41
4852 10486 1.779569 ACAAACGACCGTCATGAGTC 58.220 50.000 0.00 0.00 0.00 3.36
4853 10487 1.067974 ACAAACGACCGTCATGAGTCA 59.932 47.619 13.68 0.00 33.08 3.41
4854 10488 2.288825 ACAAACGACCGTCATGAGTCAT 60.289 45.455 13.68 0.00 33.08 3.06
4855 10489 1.996292 AACGACCGTCATGAGTCATG 58.004 50.000 24.60 24.60 42.60 3.07
4856 10490 1.173913 ACGACCGTCATGAGTCATGA 58.826 50.000 28.18 28.18 46.84 3.07
4882 10516 2.441001 AGATGATGATGAAGGTGGGGAC 59.559 50.000 0.00 0.00 0.00 4.46
4896 10530 0.735287 GGGGACGTTAGTTGACGAGC 60.735 60.000 4.29 0.00 45.47 5.03
4913 10547 2.167861 GCACCACGCGGAGATCTTC 61.168 63.158 12.47 0.00 35.59 2.87
5141 10784 3.181486 ACACGTAGACATAGTCATGCTGG 60.181 47.826 0.00 0.00 35.39 4.85
5199 10842 1.128507 TGTGCTGATCGATTGCGTTTC 59.871 47.619 15.99 9.27 38.98 2.78
5208 10851 3.623863 TCGATTGCGTTTCCAGAAAAAC 58.376 40.909 0.00 0.00 38.98 2.43
5214 10857 3.369451 TGCGTTTCCAGAAAAACAAAAGC 59.631 39.130 0.00 0.00 38.73 3.51
5232 10875 7.301054 ACAAAAGCTAATCGATTCAGAAACAG 58.699 34.615 15.25 5.70 0.00 3.16
5237 10880 1.442769 TCGATTCAGAAACAGGCAGC 58.557 50.000 0.00 0.00 0.00 5.25
5318 10965 5.370584 TGATGATTGGGGAGATGATTACTGT 59.629 40.000 0.00 0.00 0.00 3.55
5323 10970 2.224402 GGGGAGATGATTACTGTGAGGC 60.224 54.545 0.00 0.00 0.00 4.70
5325 10972 3.898123 GGGAGATGATTACTGTGAGGCTA 59.102 47.826 0.00 0.00 0.00 3.93
5327 10974 5.510520 GGGAGATGATTACTGTGAGGCTAAG 60.511 48.000 0.00 0.00 0.00 2.18
5328 10975 5.303078 GGAGATGATTACTGTGAGGCTAAGA 59.697 44.000 0.00 0.00 0.00 2.10
5331 11027 4.744570 TGATTACTGTGAGGCTAAGAACG 58.255 43.478 0.00 0.00 0.00 3.95
5345 11041 4.511826 GCTAAGAACGGACAGGGAATATTG 59.488 45.833 0.00 0.00 0.00 1.90
5405 11102 6.563422 TGACTGATCAAACAAAGACTTTTGG 58.437 36.000 0.00 0.00 46.33 3.28
5480 11181 6.088541 TGGTTAGAGGGATTGTCTAGTACT 57.911 41.667 0.00 0.00 0.00 2.73
5481 11182 7.217028 TGGTTAGAGGGATTGTCTAGTACTA 57.783 40.000 1.89 1.89 0.00 1.82
5488 11189 8.504409 AGAGGGATTGTCTAGTACTACAGTATT 58.496 37.037 0.00 0.00 32.54 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 5.022122 TGATCTTGGAACTGTCTCATCTCT 58.978 41.667 0.00 0.00 0.00 3.10
65 66 1.658717 CACATCGGCGACTCGGATC 60.659 63.158 13.76 0.00 33.12 3.36
69 70 1.006825 TTTGTCACATCGGCGACTCG 61.007 55.000 13.76 6.49 33.18 4.18
91 92 4.694982 CAGTCCAAAACCAAAATTATGCCC 59.305 41.667 0.00 0.00 0.00 5.36
102 103 1.707989 TCCATAGCCAGTCCAAAACCA 59.292 47.619 0.00 0.00 0.00 3.67
114 115 0.461961 ACTGCTTCGTCTCCATAGCC 59.538 55.000 0.00 0.00 32.73 3.93
117 118 1.275010 TGCAACTGCTTCGTCTCCATA 59.725 47.619 2.95 0.00 42.66 2.74
126 127 3.795623 ATCATCCAATGCAACTGCTTC 57.204 42.857 2.95 0.00 42.66 3.86
127 128 3.369052 CCAATCATCCAATGCAACTGCTT 60.369 43.478 2.95 0.00 42.66 3.91
199 202 1.067416 GCCTCCGTACATCGCATGA 59.933 57.895 0.00 0.00 38.35 3.07
205 208 2.674796 AAACTGAGCCTCCGTACATC 57.325 50.000 0.00 0.00 0.00 3.06
212 215 1.000771 GGGGGAAAACTGAGCCTCC 60.001 63.158 0.00 0.00 34.63 4.30
229 232 1.033574 CCTAGAGAAGCCTGTACCGG 58.966 60.000 0.00 0.00 0.00 5.28
231 234 1.410882 CTGCCTAGAGAAGCCTGTACC 59.589 57.143 0.00 0.00 0.00 3.34
271 278 2.931325 CTGTGCATGCAACACTGTTTTT 59.069 40.909 24.58 0.00 38.86 1.94
290 297 2.219458 CTAATCTGGCCAGACATGCTG 58.781 52.381 37.39 19.22 44.49 4.41
311 318 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
312 319 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
313 320 5.045869 TCCTAGGACTTATGAACCAAACAGG 60.046 44.000 7.62 0.00 45.67 4.00
314 321 5.875359 GTCCTAGGACTTATGAACCAAACAG 59.125 44.000 31.12 0.00 41.57 3.16
315 322 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
342 349 9.720769 CTTGAGACTTATAAGTTGGGACTAAAA 57.279 33.333 18.96 8.46 39.88 1.52
343 350 8.877195 ACTTGAGACTTATAAGTTGGGACTAAA 58.123 33.333 18.96 9.53 39.88 1.85
344 351 8.431910 ACTTGAGACTTATAAGTTGGGACTAA 57.568 34.615 18.96 2.28 39.88 2.24
345 352 7.123847 GGACTTGAGACTTATAAGTTGGGACTA 59.876 40.741 18.96 6.16 39.88 2.59
346 353 6.070710 GGACTTGAGACTTATAAGTTGGGACT 60.071 42.308 18.96 10.98 39.88 3.85
347 354 6.107343 GGACTTGAGACTTATAAGTTGGGAC 58.893 44.000 18.96 6.39 39.88 4.46
348 355 5.189145 GGGACTTGAGACTTATAAGTTGGGA 59.811 44.000 18.96 6.15 39.88 4.37
349 356 5.189934 AGGGACTTGAGACTTATAAGTTGGG 59.810 44.000 18.96 10.37 34.84 4.12
350 357 6.301169 AGGGACTTGAGACTTATAAGTTGG 57.699 41.667 18.96 10.07 34.84 3.77
351 358 9.720769 TTTTAGGGACTTGAGACTTATAAGTTG 57.279 33.333 18.96 9.81 38.78 3.16
353 360 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
354 361 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
355 362 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
356 363 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
357 364 7.395617 GGACTTTTTAGGGACTTGAGACTTAT 58.604 38.462 0.00 0.00 41.75 1.73
358 365 6.239800 GGGACTTTTTAGGGACTTGAGACTTA 60.240 42.308 0.00 0.00 41.75 2.24
359 366 5.456330 GGGACTTTTTAGGGACTTGAGACTT 60.456 44.000 0.00 0.00 41.75 3.01
360 367 4.041815 GGGACTTTTTAGGGACTTGAGACT 59.958 45.833 0.00 0.00 41.75 3.24
361 368 4.041815 AGGGACTTTTTAGGGACTTGAGAC 59.958 45.833 0.00 0.00 34.75 3.36
362 369 4.240323 AGGGACTTTTTAGGGACTTGAGA 58.760 43.478 0.00 0.00 34.75 3.27
363 370 4.642466 AGGGACTTTTTAGGGACTTGAG 57.358 45.455 0.00 0.00 34.75 3.02
364 371 4.287845 GGTAGGGACTTTTTAGGGACTTGA 59.712 45.833 0.00 0.00 39.49 3.02
365 372 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
366 373 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
367 374 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
368 375 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
369 376 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
370 377 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
371 378 4.765339 CCAAACAGGTAGGGACTTTTTAGG 59.235 45.833 0.00 0.00 41.75 2.69
372 379 5.959618 CCAAACAGGTAGGGACTTTTTAG 57.040 43.478 0.00 0.00 41.75 1.85
386 393 2.364972 AGTCCCAGAAACCAAACAGG 57.635 50.000 0.00 0.00 45.67 4.00
387 394 6.715264 ACTTATAAGTCCCAGAAACCAAACAG 59.285 38.462 12.50 0.00 32.86 3.16
388 395 6.607019 ACTTATAAGTCCCAGAAACCAAACA 58.393 36.000 12.50 0.00 32.86 2.83
419 426 9.490083 AGGGACTTGTAGTTGTAATATAGTCTT 57.510 33.333 0.00 0.00 27.25 3.01
427 434 8.702819 GGACTTATAGGGACTTGTAGTTGTAAT 58.297 37.037 0.00 0.00 41.75 1.89
428 435 7.124750 GGGACTTATAGGGACTTGTAGTTGTAA 59.875 40.741 0.00 0.00 41.75 2.41
429 436 6.608808 GGGACTTATAGGGACTTGTAGTTGTA 59.391 42.308 0.00 0.00 41.75 2.41
430 437 5.424573 GGGACTTATAGGGACTTGTAGTTGT 59.575 44.000 0.00 0.00 41.75 3.32
431 438 5.661759 AGGGACTTATAGGGACTTGTAGTTG 59.338 44.000 0.00 0.00 34.75 3.16
432 439 5.851418 AGGGACTTATAGGGACTTGTAGTT 58.149 41.667 0.00 0.00 34.75 2.24
433 440 5.456779 GAGGGACTTATAGGGACTTGTAGT 58.543 45.833 0.00 0.00 41.55 2.73
434 441 4.833938 GGAGGGACTTATAGGGACTTGTAG 59.166 50.000 0.00 0.00 41.55 2.74
435 442 4.233521 TGGAGGGACTTATAGGGACTTGTA 59.766 45.833 0.00 0.00 41.55 2.41
436 443 3.013648 TGGAGGGACTTATAGGGACTTGT 59.986 47.826 0.00 0.00 41.55 3.16
437 444 3.654273 TGGAGGGACTTATAGGGACTTG 58.346 50.000 0.00 0.00 41.55 3.16
438 445 4.077982 TCATGGAGGGACTTATAGGGACTT 60.078 45.833 0.00 0.00 41.55 3.01
439 446 3.471306 TCATGGAGGGACTTATAGGGACT 59.529 47.826 0.00 0.00 41.55 3.85
440 447 3.835395 CTCATGGAGGGACTTATAGGGAC 59.165 52.174 0.00 0.00 41.55 4.46
441 448 3.732742 TCTCATGGAGGGACTTATAGGGA 59.267 47.826 0.00 0.00 41.55 4.20
442 449 4.093011 CTCTCATGGAGGGACTTATAGGG 58.907 52.174 0.00 0.00 41.55 3.53
443 450 4.746466 ACTCTCATGGAGGGACTTATAGG 58.254 47.826 13.60 0.00 45.83 2.57
444 451 5.640147 AGACTCTCATGGAGGGACTTATAG 58.360 45.833 13.60 0.00 45.83 1.31
445 452 5.671463 AGACTCTCATGGAGGGACTTATA 57.329 43.478 13.60 0.00 45.83 0.98
446 453 4.551215 AGACTCTCATGGAGGGACTTAT 57.449 45.455 13.60 0.00 45.83 1.73
447 454 4.026744 CAAGACTCTCATGGAGGGACTTA 58.973 47.826 9.80 0.00 41.55 2.24
448 455 2.836981 CAAGACTCTCATGGAGGGACTT 59.163 50.000 13.60 5.25 43.49 3.01
449 456 2.225496 ACAAGACTCTCATGGAGGGACT 60.225 50.000 13.60 0.00 45.83 3.85
450 457 2.183679 ACAAGACTCTCATGGAGGGAC 58.816 52.381 13.60 0.00 45.83 4.46
451 458 2.630889 ACAAGACTCTCATGGAGGGA 57.369 50.000 13.60 0.00 45.83 4.20
452 459 3.710209 AAACAAGACTCTCATGGAGGG 57.290 47.619 13.60 3.92 45.83 4.30
453 460 8.043710 ACTTATAAAACAAGACTCTCATGGAGG 58.956 37.037 13.60 1.69 45.83 4.30
454 461 9.092876 GACTTATAAAACAAGACTCTCATGGAG 57.907 37.037 9.01 9.01 46.87 3.86
455 462 8.041323 GGACTTATAAAACAAGACTCTCATGGA 58.959 37.037 0.00 0.00 0.00 3.41
456 463 7.281100 GGGACTTATAAAACAAGACTCTCATGG 59.719 40.741 0.00 0.00 0.00 3.66
457 464 7.824289 TGGGACTTATAAAACAAGACTCTCATG 59.176 37.037 0.00 0.00 0.00 3.07
458 465 7.918076 TGGGACTTATAAAACAAGACTCTCAT 58.082 34.615 0.00 0.00 0.00 2.90
459 466 7.311092 TGGGACTTATAAAACAAGACTCTCA 57.689 36.000 0.00 0.00 0.00 3.27
460 467 8.617290 TTTGGGACTTATAAAACAAGACTCTC 57.383 34.615 0.00 0.00 0.00 3.20
461 468 9.014297 CATTTGGGACTTATAAAACAAGACTCT 57.986 33.333 0.00 0.00 0.00 3.24
462 469 7.755373 GCATTTGGGACTTATAAAACAAGACTC 59.245 37.037 0.00 0.00 0.00 3.36
463 470 7.309805 GGCATTTGGGACTTATAAAACAAGACT 60.310 37.037 0.00 0.00 0.00 3.24
464 471 6.811665 GGCATTTGGGACTTATAAAACAAGAC 59.188 38.462 0.00 0.00 0.00 3.01
465 472 6.071051 GGGCATTTGGGACTTATAAAACAAGA 60.071 38.462 0.00 0.00 0.00 3.02
466 473 6.106003 GGGCATTTGGGACTTATAAAACAAG 58.894 40.000 0.00 0.00 0.00 3.16
467 474 5.544176 TGGGCATTTGGGACTTATAAAACAA 59.456 36.000 0.00 0.00 0.00 2.83
468 475 5.046950 GTGGGCATTTGGGACTTATAAAACA 60.047 40.000 0.00 0.00 0.00 2.83
469 476 5.186992 AGTGGGCATTTGGGACTTATAAAAC 59.813 40.000 0.00 0.00 0.00 2.43
470 477 5.337788 AGTGGGCATTTGGGACTTATAAAA 58.662 37.500 0.00 0.00 0.00 1.52
471 478 4.941713 AGTGGGCATTTGGGACTTATAAA 58.058 39.130 0.00 0.00 0.00 1.40
472 479 4.601406 AGTGGGCATTTGGGACTTATAA 57.399 40.909 0.00 0.00 0.00 0.98
473 480 4.601406 AAGTGGGCATTTGGGACTTATA 57.399 40.909 0.00 0.00 0.00 0.98
474 481 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
475 482 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
476 483 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
477 484 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
478 485 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
479 486 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
480 487 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
481 488 2.233676 GGGACTTAAAGTGGGCATTTGG 59.766 50.000 0.00 0.00 0.00 3.28
482 489 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
483 490 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
484 491 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
485 492 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
486 493 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
487 494 5.366460 GACTTATAGGGACTTAAAGTGGGC 58.634 45.833 0.00 0.00 40.60 5.36
488 495 5.163227 GGGACTTATAGGGACTTAAAGTGGG 60.163 48.000 0.00 0.00 40.60 4.61
489 496 5.666265 AGGGACTTATAGGGACTTAAAGTGG 59.334 44.000 0.00 0.00 40.60 4.00
490 497 6.183360 GGAGGGACTTATAGGGACTTAAAGTG 60.183 46.154 0.00 0.00 40.60 3.16
491 498 5.904169 GGAGGGACTTATAGGGACTTAAAGT 59.096 44.000 0.00 0.00 42.31 2.66
492 499 6.042208 CAGGAGGGACTTATAGGGACTTAAAG 59.958 46.154 0.00 0.00 41.55 1.85
493 500 5.903589 CAGGAGGGACTTATAGGGACTTAAA 59.096 44.000 0.00 0.00 41.55 1.52
494 501 5.042827 ACAGGAGGGACTTATAGGGACTTAA 60.043 44.000 0.00 0.00 41.55 1.85
495 502 4.485021 ACAGGAGGGACTTATAGGGACTTA 59.515 45.833 0.00 0.00 41.55 2.24
496 503 3.275228 ACAGGAGGGACTTATAGGGACTT 59.725 47.826 0.00 0.00 41.55 3.01
497 504 2.866454 ACAGGAGGGACTTATAGGGACT 59.134 50.000 0.00 0.00 41.55 3.85
498 505 3.331718 ACAGGAGGGACTTATAGGGAC 57.668 52.381 0.00 0.00 41.55 4.46
499 506 4.037927 CAAACAGGAGGGACTTATAGGGA 58.962 47.826 0.00 0.00 41.55 4.20
500 507 3.136626 CCAAACAGGAGGGACTTATAGGG 59.863 52.174 0.00 0.00 41.55 3.53
501 508 3.780850 ACCAAACAGGAGGGACTTATAGG 59.219 47.826 0.00 0.00 41.55 2.57
502 509 5.437191 AACCAAACAGGAGGGACTTATAG 57.563 43.478 0.00 0.00 41.55 1.31
503 510 5.853572 AAACCAAACAGGAGGGACTTATA 57.146 39.130 0.00 0.00 41.55 0.98
504 511 4.741928 AAACCAAACAGGAGGGACTTAT 57.258 40.909 0.00 0.00 41.55 1.73
505 512 4.909088 TCTAAACCAAACAGGAGGGACTTA 59.091 41.667 0.00 0.00 41.55 2.24
506 513 3.720002 TCTAAACCAAACAGGAGGGACTT 59.280 43.478 0.00 0.00 41.55 3.01
508 515 3.782656 TCTAAACCAAACAGGAGGGAC 57.217 47.619 0.00 0.00 41.22 4.46
509 516 3.010138 CCATCTAAACCAAACAGGAGGGA 59.990 47.826 0.00 0.00 41.22 4.20
510 517 3.356290 CCATCTAAACCAAACAGGAGGG 58.644 50.000 0.00 0.00 41.22 4.30
511 518 3.010138 TCCCATCTAAACCAAACAGGAGG 59.990 47.826 0.00 0.00 41.22 4.30
512 519 4.010349 GTCCCATCTAAACCAAACAGGAG 58.990 47.826 0.00 0.00 41.22 3.69
513 520 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
514 521 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
515 522 7.499232 CCTATAAGTCCCATCTAAACCAAACAG 59.501 40.741 0.00 0.00 0.00 3.16
516 523 7.343357 CCTATAAGTCCCATCTAAACCAAACA 58.657 38.462 0.00 0.00 0.00 2.83
517 524 6.771267 CCCTATAAGTCCCATCTAAACCAAAC 59.229 42.308 0.00 0.00 0.00 2.93
518 525 6.679303 TCCCTATAAGTCCCATCTAAACCAAA 59.321 38.462 0.00 0.00 0.00 3.28
519 526 6.100714 GTCCCTATAAGTCCCATCTAAACCAA 59.899 42.308 0.00 0.00 0.00 3.67
520 527 5.605488 GTCCCTATAAGTCCCATCTAAACCA 59.395 44.000 0.00 0.00 0.00 3.67
521 528 5.845065 AGTCCCTATAAGTCCCATCTAAACC 59.155 44.000 0.00 0.00 0.00 3.27
522 529 6.997942 AGTCCCTATAAGTCCCATCTAAAC 57.002 41.667 0.00 0.00 0.00 2.01
523 530 8.401955 AAAAGTCCCTATAAGTCCCATCTAAA 57.598 34.615 0.00 0.00 0.00 1.85
524 531 8.401955 AAAAAGTCCCTATAAGTCCCATCTAA 57.598 34.615 0.00 0.00 0.00 2.10
526 533 6.910259 AAAAAGTCCCTATAAGTCCCATCT 57.090 37.500 0.00 0.00 0.00 2.90
546 553 7.395206 GGACTTATTGGCTTAGGGACTTAAAAA 59.605 37.037 0.00 0.00 41.75 1.94
547 554 6.888088 GGACTTATTGGCTTAGGGACTTAAAA 59.112 38.462 0.00 0.00 41.75 1.52
548 555 6.420638 GGACTTATTGGCTTAGGGACTTAAA 58.579 40.000 0.00 0.00 41.75 1.52
549 556 5.104235 GGGACTTATTGGCTTAGGGACTTAA 60.104 44.000 0.00 0.00 41.75 1.85
550 557 4.411212 GGGACTTATTGGCTTAGGGACTTA 59.589 45.833 0.00 0.00 41.75 2.24
551 558 3.202373 GGGACTTATTGGCTTAGGGACTT 59.798 47.826 0.00 0.00 41.75 3.01
552 559 2.778270 GGGACTTATTGGCTTAGGGACT 59.222 50.000 0.00 0.00 46.37 3.85
553 560 2.778270 AGGGACTTATTGGCTTAGGGAC 59.222 50.000 0.00 0.00 27.25 4.46
554 561 3.145559 AGGGACTTATTGGCTTAGGGA 57.854 47.619 0.00 0.00 27.25 4.20
555 562 4.232091 TCTAGGGACTTATTGGCTTAGGG 58.768 47.826 0.00 0.00 41.75 3.53
556 563 5.888982 TTCTAGGGACTTATTGGCTTAGG 57.111 43.478 0.00 0.00 41.75 2.69
557 564 6.650120 TGTTTCTAGGGACTTATTGGCTTAG 58.350 40.000 0.00 0.00 41.75 2.18
558 565 6.630203 TGTTTCTAGGGACTTATTGGCTTA 57.370 37.500 0.00 0.00 41.75 3.09
559 566 5.514500 TGTTTCTAGGGACTTATTGGCTT 57.486 39.130 0.00 0.00 41.75 4.35
560 567 5.514500 TTGTTTCTAGGGACTTATTGGCT 57.486 39.130 0.00 0.00 41.75 4.75
561 568 5.475564 TGTTTGTTTCTAGGGACTTATTGGC 59.524 40.000 0.00 0.00 41.75 4.52
562 569 6.072119 GGTGTTTGTTTCTAGGGACTTATTGG 60.072 42.308 0.00 0.00 41.75 3.16
563 570 6.072119 GGGTGTTTGTTTCTAGGGACTTATTG 60.072 42.308 0.00 0.00 41.75 1.90
564 571 6.008331 GGGTGTTTGTTTCTAGGGACTTATT 58.992 40.000 0.00 0.00 41.75 1.40
565 572 5.312443 AGGGTGTTTGTTTCTAGGGACTTAT 59.688 40.000 0.00 0.00 41.75 1.73
566 573 4.661709 AGGGTGTTTGTTTCTAGGGACTTA 59.338 41.667 0.00 0.00 41.75 2.24
567 574 3.462205 AGGGTGTTTGTTTCTAGGGACTT 59.538 43.478 0.00 0.00 41.75 3.01
568 575 3.053826 AGGGTGTTTGTTTCTAGGGACT 58.946 45.455 0.00 0.00 46.37 3.85
569 576 3.072622 AGAGGGTGTTTGTTTCTAGGGAC 59.927 47.826 0.00 0.00 0.00 4.46
570 577 3.323775 AGAGGGTGTTTGTTTCTAGGGA 58.676 45.455 0.00 0.00 0.00 4.20
571 578 3.790089 AGAGGGTGTTTGTTTCTAGGG 57.210 47.619 0.00 0.00 0.00 3.53
572 579 5.866207 ACTAAGAGGGTGTTTGTTTCTAGG 58.134 41.667 0.00 0.00 0.00 3.02
573 580 8.148999 ACTTACTAAGAGGGTGTTTGTTTCTAG 58.851 37.037 2.65 0.00 0.00 2.43
574 581 8.026396 ACTTACTAAGAGGGTGTTTGTTTCTA 57.974 34.615 2.65 0.00 0.00 2.10
575 582 6.896883 ACTTACTAAGAGGGTGTTTGTTTCT 58.103 36.000 2.65 0.00 0.00 2.52
576 583 7.930325 ACTACTTACTAAGAGGGTGTTTGTTTC 59.070 37.037 2.65 0.00 0.00 2.78
577 584 7.799081 ACTACTTACTAAGAGGGTGTTTGTTT 58.201 34.615 2.65 0.00 0.00 2.83
578 585 7.370905 ACTACTTACTAAGAGGGTGTTTGTT 57.629 36.000 2.65 0.00 0.00 2.83
579 586 6.990908 ACTACTTACTAAGAGGGTGTTTGT 57.009 37.500 2.65 0.00 0.00 2.83
580 587 8.362639 TGTTACTACTTACTAAGAGGGTGTTTG 58.637 37.037 2.65 0.00 0.00 2.93
581 588 8.482852 TGTTACTACTTACTAAGAGGGTGTTT 57.517 34.615 2.65 0.00 0.00 2.83
582 589 8.661752 ATGTTACTACTTACTAAGAGGGTGTT 57.338 34.615 2.65 0.00 0.00 3.32
583 590 8.661752 AATGTTACTACTTACTAAGAGGGTGT 57.338 34.615 2.65 0.00 0.00 4.16
592 599 8.137437 GCCGGTTCATAATGTTACTACTTACTA 58.863 37.037 1.90 0.00 0.00 1.82
593 600 6.982724 GCCGGTTCATAATGTTACTACTTACT 59.017 38.462 1.90 0.00 0.00 2.24
594 601 6.074676 CGCCGGTTCATAATGTTACTACTTAC 60.075 42.308 1.90 0.00 0.00 2.34
595 602 5.978919 CGCCGGTTCATAATGTTACTACTTA 59.021 40.000 1.90 0.00 0.00 2.24
596 603 4.807304 CGCCGGTTCATAATGTTACTACTT 59.193 41.667 1.90 0.00 0.00 2.24
597 604 4.365723 CGCCGGTTCATAATGTTACTACT 58.634 43.478 1.90 0.00 0.00 2.57
598 605 3.060070 GCGCCGGTTCATAATGTTACTAC 60.060 47.826 1.90 0.00 0.00 2.73
599 606 3.125316 GCGCCGGTTCATAATGTTACTA 58.875 45.455 1.90 0.00 0.00 1.82
600 607 1.937899 GCGCCGGTTCATAATGTTACT 59.062 47.619 1.90 0.00 0.00 2.24
601 608 1.666700 TGCGCCGGTTCATAATGTTAC 59.333 47.619 4.18 0.00 0.00 2.50
660 705 1.355563 CATCTGAGCAATGCAGGCG 59.644 57.895 8.35 0.00 36.08 5.52
663 708 2.478031 GCTTCACATCTGAGCAATGCAG 60.478 50.000 8.35 0.00 34.71 4.41
665 710 1.743958 AGCTTCACATCTGAGCAATGC 59.256 47.619 0.00 0.00 0.00 3.56
666 711 2.478031 GCAGCTTCACATCTGAGCAATG 60.478 50.000 0.00 0.00 32.26 2.82
667 712 1.743958 GCAGCTTCACATCTGAGCAAT 59.256 47.619 0.00 0.00 32.26 3.56
671 716 1.732809 CACTGCAGCTTCACATCTGAG 59.267 52.381 15.27 0.00 32.26 3.35
672 717 1.609841 CCACTGCAGCTTCACATCTGA 60.610 52.381 15.27 0.00 32.26 3.27
673 718 0.803117 CCACTGCAGCTTCACATCTG 59.197 55.000 15.27 0.42 0.00 2.90
674 719 0.959372 GCCACTGCAGCTTCACATCT 60.959 55.000 15.27 0.00 37.47 2.90
744 830 2.171659 TCAACTTTACCACTGTGCAGGA 59.828 45.455 1.29 0.00 0.00 3.86
756 842 1.266989 GCTGTGTGGGCTCAACTTTAC 59.733 52.381 0.00 0.00 0.00 2.01
784 871 6.766429 TGGATGATGAGTGAATCCAATAGAG 58.234 40.000 1.17 0.00 45.33 2.43
806 893 1.572085 CCGAGCTTGCTCTGTTGTGG 61.572 60.000 18.75 8.84 0.00 4.17
824 911 4.759205 AAATGTCGCCCCAGCCCC 62.759 66.667 0.00 0.00 34.57 5.80
826 913 1.815817 AACAAAATGTCGCCCCAGCC 61.816 55.000 0.00 0.00 34.57 4.85
827 914 0.667184 CAACAAAATGTCGCCCCAGC 60.667 55.000 0.00 0.00 0.00 4.85
834 921 2.053627 GAGCAAGCCAACAAAATGTCG 58.946 47.619 0.00 0.00 0.00 4.35
846 933 2.125350 AGCGCACTAGAGCAAGCC 60.125 61.111 11.47 0.00 43.61 4.35
878 965 2.514458 TTGATTGAGGGGAAAGAGGC 57.486 50.000 0.00 0.00 0.00 4.70
918 3977 4.229096 GTTCATCAGAGATCGATCAGAGC 58.771 47.826 26.47 12.74 35.01 4.09
937 4003 4.097361 GGCCGGACTCTGGGGTTC 62.097 72.222 5.05 0.00 0.00 3.62
938 4004 4.974438 TGGCCGGACTCTGGGGTT 62.974 66.667 9.82 0.00 0.00 4.11
939 4005 4.974438 TTGGCCGGACTCTGGGGT 62.974 66.667 9.82 0.00 0.00 4.95
940 4006 4.410400 GTTGGCCGGACTCTGGGG 62.410 72.222 9.82 0.00 0.00 4.96
941 4007 3.636231 TGTTGGCCGGACTCTGGG 61.636 66.667 9.82 0.00 0.00 4.45
942 4008 2.358737 GTGTTGGCCGGACTCTGG 60.359 66.667 9.82 0.00 0.00 3.86
943 4009 2.358737 GGTGTTGGCCGGACTCTG 60.359 66.667 9.82 0.00 0.00 3.35
1044 4110 0.472898 GGAAGGGAAATCTACGGGGG 59.527 60.000 0.00 0.00 0.00 5.40
1045 4111 1.134189 GTGGAAGGGAAATCTACGGGG 60.134 57.143 0.00 0.00 0.00 5.73
1046 4112 1.838077 AGTGGAAGGGAAATCTACGGG 59.162 52.381 0.00 0.00 33.92 5.28
1087 4153 2.656646 CGCTAGAGTGGTGGTGCA 59.343 61.111 0.00 0.00 0.00 4.57
1088 4154 2.815647 GCGCTAGAGTGGTGGTGC 60.816 66.667 0.00 0.00 0.00 5.01
1095 4161 1.010935 CACACAGTGGCGCTAGAGTG 61.011 60.000 19.50 19.50 0.00 3.51
1096 4162 1.290324 CACACAGTGGCGCTAGAGT 59.710 57.895 7.64 0.00 0.00 3.24
1097 4163 2.097038 GCACACAGTGGCGCTAGAG 61.097 63.158 7.64 0.00 33.64 2.43
1098 4164 2.048222 GCACACAGTGGCGCTAGA 60.048 61.111 7.64 0.00 33.64 2.43
1131 4230 2.740981 AGAAGATTTGCTCGCTCAGTTG 59.259 45.455 0.00 0.00 0.00 3.16
1140 4239 0.107459 AGGGCCGAGAAGATTTGCTC 60.107 55.000 0.00 0.00 0.00 4.26
1168 4267 4.425520 GGAGCGGTGCTACAATATATCTC 58.574 47.826 0.00 0.00 39.71 2.75
1182 4281 2.357517 AAGCGAAGTGGAGCGGTG 60.358 61.111 0.00 0.00 38.34 4.94
1244 4343 1.537348 CGACGTGGGAGACAACAAAGA 60.537 52.381 0.00 0.00 0.00 2.52
1245 4344 0.859232 CGACGTGGGAGACAACAAAG 59.141 55.000 0.00 0.00 0.00 2.77
1246 4345 0.460722 TCGACGTGGGAGACAACAAA 59.539 50.000 0.00 0.00 0.00 2.83
1247 4346 0.031585 CTCGACGTGGGAGACAACAA 59.968 55.000 7.30 0.00 33.27 2.83
1248 4347 1.658114 CTCGACGTGGGAGACAACA 59.342 57.895 7.30 0.00 33.27 3.33
1249 4348 1.733399 GCTCGACGTGGGAGACAAC 60.733 63.158 15.42 0.00 33.27 3.32
1250 4349 2.197605 TGCTCGACGTGGGAGACAA 61.198 57.895 15.42 0.12 33.27 3.18
1293 4392 4.101790 GGCCATTGACGTGCACCG 62.102 66.667 12.15 9.19 44.03 4.94
1299 4398 4.634703 TGTGGCGGCCATTGACGT 62.635 61.111 26.68 0.00 35.28 4.34
1338 4437 3.848347 ATGCGACGCCGGCAGATAG 62.848 63.158 28.98 12.44 44.71 2.08
1345 4444 4.923710 TGATCGATGCGACGCCGG 62.924 66.667 18.69 0.00 39.18 6.13
1373 4499 7.634671 ATCAATCATATCAAACTGAACTGCA 57.365 32.000 0.00 0.00 0.00 4.41
1374 4500 7.434307 CCAATCAATCATATCAAACTGAACTGC 59.566 37.037 0.00 0.00 0.00 4.40
1376 4502 8.585471 ACCAATCAATCATATCAAACTGAACT 57.415 30.769 0.00 0.00 0.00 3.01
1380 4506 7.262772 AGCAACCAATCAATCATATCAAACTG 58.737 34.615 0.00 0.00 0.00 3.16
1381 4507 7.414222 AGCAACCAATCAATCATATCAAACT 57.586 32.000 0.00 0.00 0.00 2.66
1382 4508 7.010738 CCAAGCAACCAATCAATCATATCAAAC 59.989 37.037 0.00 0.00 0.00 2.93
1383 4509 7.042950 CCAAGCAACCAATCAATCATATCAAA 58.957 34.615 0.00 0.00 0.00 2.69
1386 4512 4.986659 GCCAAGCAACCAATCAATCATATC 59.013 41.667 0.00 0.00 0.00 1.63
1387 4513 4.500205 CGCCAAGCAACCAATCAATCATAT 60.500 41.667 0.00 0.00 0.00 1.78
1389 4515 2.417651 CGCCAAGCAACCAATCAATCAT 60.418 45.455 0.00 0.00 0.00 2.45
1404 4530 1.927710 GCTCTGTTTCAAAGCGCCAAG 60.928 52.381 2.29 0.00 0.00 3.61
1407 4533 4.541020 GCTCTGTTTCAAAGCGCC 57.459 55.556 2.29 0.00 0.00 6.53
1410 4536 0.582005 ACGACGCTCTGTTTCAAAGC 59.418 50.000 0.00 0.00 0.00 3.51
1411 4537 1.593006 ACACGACGCTCTGTTTCAAAG 59.407 47.619 0.00 0.00 0.00 2.77
1412 4538 1.326245 CACACGACGCTCTGTTTCAAA 59.674 47.619 0.00 0.00 0.00 2.69
1413 4539 0.927537 CACACGACGCTCTGTTTCAA 59.072 50.000 0.00 0.00 0.00 2.69
1414 4540 1.487452 GCACACGACGCTCTGTTTCA 61.487 55.000 0.00 0.00 0.00 2.69
1415 4541 1.201825 GCACACGACGCTCTGTTTC 59.798 57.895 0.00 0.00 0.00 2.78
1416 4542 2.585869 CGCACACGACGCTCTGTTT 61.586 57.895 0.00 0.00 43.93 2.83
1474 4600 0.466124 CCTCGTCATCTTCCCCTTCC 59.534 60.000 0.00 0.00 0.00 3.46
1532 4661 1.372997 GAAGCCGTCGAGCTCAACA 60.373 57.895 15.40 0.00 44.11 3.33
1592 4721 1.148273 GAGGCGGCCATCACCATAA 59.852 57.895 23.09 0.00 0.00 1.90
1808 4943 0.246086 CCGAGAGCAGCTTCTCTTGT 59.754 55.000 23.85 1.92 43.05 3.16
1871 5006 2.081212 CGACGACGTGGAGCAGTTC 61.081 63.158 4.58 0.00 34.56 3.01
1986 5131 2.570181 GTCGTACCACCACTCCCG 59.430 66.667 0.00 0.00 0.00 5.14
2446 6741 2.181777 GCATCCTCTGCGTCGACA 59.818 61.111 17.16 0.00 41.97 4.35
2484 6779 2.029623 GATCTCCGCCAGGTACTTGTA 58.970 52.381 4.10 0.00 34.60 2.41
2617 6912 5.005740 AGGAAACGGTTGTTAATCTTACCC 58.994 41.667 0.00 0.00 37.31 3.69
2629 6924 8.608317 ACATTTGAAAATTTAAGGAAACGGTTG 58.392 29.630 0.00 0.00 0.00 3.77
2646 6941 9.137459 TCCTAAAATACAGTCCAACATTTGAAA 57.863 29.630 0.00 0.00 0.00 2.69
2647 6942 8.698973 TCCTAAAATACAGTCCAACATTTGAA 57.301 30.769 0.00 0.00 0.00 2.69
2686 6981 7.754924 TGATCCGAAATATTTTCTGCTTCAAAC 59.245 33.333 1.43 0.00 0.00 2.93
2690 6985 7.742089 CGTATGATCCGAAATATTTTCTGCTTC 59.258 37.037 1.43 0.00 0.00 3.86
2696 7029 6.888430 AGCACGTATGATCCGAAATATTTTC 58.112 36.000 1.43 0.00 0.00 2.29
2719 7052 7.707464 GGTAATCATGCTCTAGATCATCATGAG 59.293 40.741 21.10 8.12 44.28 2.90
2726 7059 3.511540 CCCGGTAATCATGCTCTAGATCA 59.488 47.826 0.00 0.00 0.00 2.92
2730 7063 2.232452 CCTCCCGGTAATCATGCTCTAG 59.768 54.545 0.00 0.00 0.00 2.43
2734 7067 1.213296 AACCTCCCGGTAATCATGCT 58.787 50.000 0.00 0.00 44.73 3.79
2768 7105 5.467063 GCCTATCATTAGCTAGACAACAACC 59.533 44.000 0.00 0.00 0.00 3.77
2773 7110 5.887214 TTGGCCTATCATTAGCTAGACAA 57.113 39.130 3.32 0.00 0.00 3.18
2774 7111 5.543790 TGATTGGCCTATCATTAGCTAGACA 59.456 40.000 23.70 0.00 29.82 3.41
3005 7536 7.865707 GTCATATTGACAGACTGAAAAGTGTT 58.134 34.615 10.08 0.00 46.22 3.32
3028 7653 7.332182 CAGAAGACAATCCTAGTTAACTTGGTC 59.668 40.741 28.01 20.30 39.42 4.02
3042 7667 5.312120 TCGACTTAGACAGAAGACAATCC 57.688 43.478 0.00 0.00 0.00 3.01
3047 7678 4.416620 CACCATCGACTTAGACAGAAGAC 58.583 47.826 0.00 0.00 0.00 3.01
3052 7683 3.695060 AGTACCACCATCGACTTAGACAG 59.305 47.826 0.00 0.00 0.00 3.51
3092 7862 0.302890 CTCTATTCGGCTGCTTTGCG 59.697 55.000 0.00 0.00 0.00 4.85
3177 7971 2.205074 GCTTCCATACTCCATGACACG 58.795 52.381 0.00 0.00 36.69 4.49
3290 8084 5.410924 TGATCGATGGATAATAAAGCGGAG 58.589 41.667 0.54 0.00 31.51 4.63
3338 8133 2.618816 GCTGAATGGATTGACTGGGTGA 60.619 50.000 0.00 0.00 0.00 4.02
3373 8168 7.307278 GCAAGTGCATTATCTTAGACAGAGATG 60.307 40.741 0.00 0.00 41.59 2.90
3384 8179 5.494724 TCTCTGAAGCAAGTGCATTATCTT 58.505 37.500 6.00 0.00 45.16 2.40
3386 8181 5.448360 GGTTCTCTGAAGCAAGTGCATTATC 60.448 44.000 6.00 0.00 45.16 1.75
3387 8182 4.397417 GGTTCTCTGAAGCAAGTGCATTAT 59.603 41.667 6.00 0.00 45.16 1.28
3388 8183 3.753272 GGTTCTCTGAAGCAAGTGCATTA 59.247 43.478 6.00 0.00 45.16 1.90
3389 8184 2.555757 GGTTCTCTGAAGCAAGTGCATT 59.444 45.455 6.00 0.00 45.16 3.56
3390 8185 2.157738 GGTTCTCTGAAGCAAGTGCAT 58.842 47.619 6.00 0.00 45.16 3.96
3391 8186 1.134128 TGGTTCTCTGAAGCAAGTGCA 60.134 47.619 6.00 0.00 45.16 4.57
3392 8187 1.534595 CTGGTTCTCTGAAGCAAGTGC 59.465 52.381 12.24 0.00 42.49 4.40
3393 8188 1.534595 GCTGGTTCTCTGAAGCAAGTG 59.465 52.381 12.24 4.02 35.69 3.16
3394 8189 1.141657 TGCTGGTTCTCTGAAGCAAGT 59.858 47.619 12.24 0.00 42.42 3.16
3395 8190 1.534595 GTGCTGGTTCTCTGAAGCAAG 59.465 52.381 12.24 8.37 46.48 4.01
3396 8191 1.141657 AGTGCTGGTTCTCTGAAGCAA 59.858 47.619 12.24 0.00 46.48 3.91
3397 8192 0.761187 AGTGCTGGTTCTCTGAAGCA 59.239 50.000 10.97 10.97 43.10 3.91
3398 8193 1.534595 CAAGTGCTGGTTCTCTGAAGC 59.465 52.381 2.95 2.95 36.18 3.86
3399 8194 1.534595 GCAAGTGCTGGTTCTCTGAAG 59.465 52.381 0.00 0.00 38.21 3.02
3400 8195 1.134128 TGCAAGTGCTGGTTCTCTGAA 60.134 47.619 4.69 0.00 42.66 3.02
3401 8196 0.469494 TGCAAGTGCTGGTTCTCTGA 59.531 50.000 4.69 0.00 42.66 3.27
3402 8197 1.002033 GTTGCAAGTGCTGGTTCTCTG 60.002 52.381 0.00 0.00 42.66 3.35
3403 8198 1.312815 GTTGCAAGTGCTGGTTCTCT 58.687 50.000 0.00 0.00 42.66 3.10
3404 8199 1.024271 TGTTGCAAGTGCTGGTTCTC 58.976 50.000 0.00 0.00 42.66 2.87
3405 8200 1.134946 GTTGTTGCAAGTGCTGGTTCT 59.865 47.619 0.00 0.00 42.66 3.01
3455 8250 4.320861 GCTGCCAAACATGTGTTGTATGTA 60.321 41.667 0.00 0.00 37.77 2.29
3456 8251 3.552684 GCTGCCAAACATGTGTTGTATGT 60.553 43.478 0.00 0.00 40.30 2.29
3457 8252 2.988493 GCTGCCAAACATGTGTTGTATG 59.012 45.455 0.00 0.00 37.68 2.39
3458 8253 2.627221 TGCTGCCAAACATGTGTTGTAT 59.373 40.909 0.00 0.00 37.68 2.29
3480 8275 4.133078 ACTTCACTTCAAGCAGAGGAAAG 58.867 43.478 0.00 0.00 0.00 2.62
3498 8294 6.428159 TGATTGGAGCTCAGTAAAAGAACTTC 59.572 38.462 17.19 1.48 0.00 3.01
3548 8344 8.414778 CCAAACAAAGGGTAACAGTAATAACAA 58.585 33.333 0.00 0.00 39.74 2.83
3563 8378 4.571919 TGTATACTCGACCAAACAAAGGG 58.428 43.478 4.17 0.00 0.00 3.95
3574 8389 4.277672 TGGCAGAAGGTATGTATACTCGAC 59.722 45.833 4.17 0.00 33.81 4.20
3642 8457 0.765510 ACAGAAAGCGGAGGAAGGTT 59.234 50.000 0.00 0.00 0.00 3.50
3658 8473 4.314121 ACTAAAGCAGAAAGAGCAGACAG 58.686 43.478 0.00 0.00 0.00 3.51
3796 8613 5.878116 AGTCAGCACATTATAGGCGTTTAAA 59.122 36.000 0.00 0.00 0.00 1.52
3797 8614 5.293324 CAGTCAGCACATTATAGGCGTTTAA 59.707 40.000 0.00 0.00 0.00 1.52
3798 8615 4.808895 CAGTCAGCACATTATAGGCGTTTA 59.191 41.667 0.00 0.00 0.00 2.01
3799 8616 3.623060 CAGTCAGCACATTATAGGCGTTT 59.377 43.478 0.00 0.00 0.00 3.60
3800 8617 3.198068 CAGTCAGCACATTATAGGCGTT 58.802 45.455 0.00 0.00 0.00 4.84
3802 8619 2.826428 ACAGTCAGCACATTATAGGCG 58.174 47.619 0.00 0.00 0.00 5.52
3804 8621 8.554528 CAGAATTTACAGTCAGCACATTATAGG 58.445 37.037 0.00 0.00 0.00 2.57
3805 8622 9.317936 TCAGAATTTACAGTCAGCACATTATAG 57.682 33.333 0.00 0.00 0.00 1.31
3806 8623 9.665719 TTCAGAATTTACAGTCAGCACATTATA 57.334 29.630 0.00 0.00 0.00 0.98
3807 8624 8.565896 TTCAGAATTTACAGTCAGCACATTAT 57.434 30.769 0.00 0.00 0.00 1.28
3854 8671 4.683781 TGGAAATTTGCAGTCGTAAAATGC 59.316 37.500 8.47 0.00 40.40 3.56
3862 8679 5.903764 TGAAAATTGGAAATTTGCAGTCG 57.096 34.783 12.38 0.00 0.00 4.18
3919 8736 2.472695 TTAGATGCGTCTGCCAGTTT 57.527 45.000 18.98 0.00 41.78 2.66
3962 8779 1.780806 TATAGTCTCTCTCCGTCGCG 58.219 55.000 0.00 0.00 0.00 5.87
4161 8981 1.303561 GGGCTCTGGTGTGCATTGA 60.304 57.895 0.00 0.00 34.68 2.57
4168 8988 2.883828 CGACAAGGGGCTCTGGTGT 61.884 63.158 0.00 0.00 27.48 4.16
4170 8990 2.526873 ACGACAAGGGGCTCTGGT 60.527 61.111 0.00 0.00 30.77 4.00
4213 9033 3.053991 TCTCCTTCTCCTTCTCGTCATCT 60.054 47.826 0.00 0.00 0.00 2.90
4459 9300 8.474025 TCAAAACAACTGTACAAAAGGATCAAT 58.526 29.630 0.00 0.00 0.00 2.57
4485 9330 5.409214 GCACAAGCCAAAAATATCAACACAT 59.591 36.000 0.00 0.00 33.58 3.21
4521 9366 1.434555 CCCGCGTTACTCACAATCAA 58.565 50.000 4.92 0.00 0.00 2.57
4533 9378 2.685850 AAGAAAGTATAGCCCGCGTT 57.314 45.000 4.92 0.00 0.00 4.84
4624 10187 8.963130 CAAAATAAGCGTCACAATTTTGAACTA 58.037 29.630 11.91 0.00 45.56 2.24
4634 10228 4.321601 CCCAATCCAAAATAAGCGTCACAA 60.322 41.667 0.00 0.00 0.00 3.33
4657 10251 8.812972 TGTCATACTCATATGTAATTACTCCCC 58.187 37.037 16.33 0.00 39.48 4.81
4695 10289 1.625511 AGAAACGAAGGGAGTACCGT 58.374 50.000 0.00 0.00 46.96 4.83
4783 10417 6.021030 ACTAAGTTATGAACTACTCCCACCA 58.979 40.000 0.00 0.00 41.91 4.17
4850 10484 6.645827 CCTTCATCATCATCTACTGTCATGAC 59.354 42.308 19.27 19.27 31.80 3.06
4851 10485 6.325804 ACCTTCATCATCATCTACTGTCATGA 59.674 38.462 0.00 0.00 33.55 3.07
4852 10486 6.424207 CACCTTCATCATCATCTACTGTCATG 59.576 42.308 0.00 0.00 0.00 3.07
4853 10487 6.464039 CCACCTTCATCATCATCTACTGTCAT 60.464 42.308 0.00 0.00 0.00 3.06
4854 10488 5.163374 CCACCTTCATCATCATCTACTGTCA 60.163 44.000 0.00 0.00 0.00 3.58
4855 10489 5.295950 CCACCTTCATCATCATCTACTGTC 58.704 45.833 0.00 0.00 0.00 3.51
4856 10490 4.102210 CCCACCTTCATCATCATCTACTGT 59.898 45.833 0.00 0.00 0.00 3.55
4882 10516 0.782384 GTGGTGCTCGTCAACTAACG 59.218 55.000 0.00 0.00 43.92 3.18
4896 10530 0.526524 GAGAAGATCTCCGCGTGGTG 60.527 60.000 16.01 13.27 37.55 4.17
4913 10547 4.681942 GCTTTACACTCGTATGCATAGGAG 59.318 45.833 37.08 37.08 45.73 3.69
5113 10756 4.266714 TGACTATGTCTACGTGTGATCCA 58.733 43.478 0.00 0.00 33.15 3.41
5141 10784 4.141459 CCTCCTTAACCTCCCATCCTAAAC 60.141 50.000 0.00 0.00 0.00 2.01
5186 10829 4.226761 GTTTTTCTGGAAACGCAATCGAT 58.773 39.130 0.00 0.00 39.41 3.59
5199 10842 7.594758 TGAATCGATTAGCTTTTGTTTTTCTGG 59.405 33.333 11.38 0.00 0.00 3.86
5208 10851 6.744537 CCTGTTTCTGAATCGATTAGCTTTTG 59.255 38.462 11.38 0.00 0.00 2.44
5214 10857 4.260538 GCTGCCTGTTTCTGAATCGATTAG 60.261 45.833 11.38 9.11 0.00 1.73
5232 10875 3.191162 TCAATTATCAACACAGTGCTGCC 59.809 43.478 0.00 0.00 0.00 4.85
5237 10880 8.900511 AATCGATTTCAATTATCAACACAGTG 57.099 30.769 4.39 0.00 0.00 3.66
5318 10965 0.895530 CCTGTCCGTTCTTAGCCTCA 59.104 55.000 0.00 0.00 0.00 3.86
5323 10970 5.671493 ACAATATTCCCTGTCCGTTCTTAG 58.329 41.667 0.00 0.00 0.00 2.18
5325 10972 4.225267 AGACAATATTCCCTGTCCGTTCTT 59.775 41.667 2.33 0.00 42.45 2.52
5327 10974 3.871594 CAGACAATATTCCCTGTCCGTTC 59.128 47.826 2.33 0.00 42.45 3.95
5328 10975 3.370527 CCAGACAATATTCCCTGTCCGTT 60.371 47.826 10.85 0.00 42.45 4.44
5331 11027 2.777692 TCCCAGACAATATTCCCTGTCC 59.222 50.000 10.85 0.00 42.45 4.02
5345 11041 0.034059 CGGCCATCATAGTCCCAGAC 59.966 60.000 2.24 0.00 0.00 3.51
5405 11102 3.054878 CTCCATTCAGTTGTTGCTTTGC 58.945 45.455 0.00 0.00 0.00 3.68
5481 11182 9.787435 TCCATAACTCAAAAGTGTTAATACTGT 57.213 29.630 5.55 0.00 35.36 3.55
5488 11189 6.150976 CCATGCTCCATAACTCAAAAGTGTTA 59.849 38.462 0.00 0.00 35.36 2.41
5490 11191 4.460382 CCATGCTCCATAACTCAAAAGTGT 59.540 41.667 0.00 0.00 35.36 3.55
5491 11192 4.701651 TCCATGCTCCATAACTCAAAAGTG 59.298 41.667 0.00 0.00 35.36 3.16
5499 11200 3.589951 ATTGCTCCATGCTCCATAACT 57.410 42.857 0.00 0.00 43.37 2.24
5502 11203 4.174704 AGAAATTGCTCCATGCTCCATA 57.825 40.909 0.00 0.00 43.37 2.74
5532 11233 0.752658 AGTGCAAAAGGGACCAAAGC 59.247 50.000 0.00 0.00 38.89 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.