Multiple sequence alignment - TraesCS2B01G585200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G585200 chr2B 100.000 4537 0 0 1 4537 772048785 772053321 0.000000e+00 8379.0
1 TraesCS2B01G585200 chr2B 86.698 639 70 10 6 633 104932754 104933388 0.000000e+00 695.0
2 TraesCS2B01G585200 chr2B 94.872 78 3 1 4461 4537 782533401 782533478 2.220000e-23 121.0
3 TraesCS2B01G585200 chr2A 90.717 3458 161 64 946 4353 758925385 758922038 0.000000e+00 4460.0
4 TraesCS2B01G585200 chr2A 95.714 70 3 0 4397 4466 758922044 758921975 3.710000e-21 113.0
5 TraesCS2B01G585200 chr2A 83.186 113 11 5 728 832 758925601 758925489 3.740000e-16 97.1
6 TraesCS2B01G585200 chr2D 92.765 3027 115 39 1453 4466 629204826 629201891 0.000000e+00 4281.0
7 TraesCS2B01G585200 chr2D 86.003 643 72 11 1 631 353543938 353544574 0.000000e+00 673.0
8 TraesCS2B01G585200 chr2D 85.647 641 78 9 1 631 387480301 387480937 0.000000e+00 662.0
9 TraesCS2B01G585200 chr2D 78.269 566 69 29 728 1286 629205330 629204812 9.470000e-82 315.0
10 TraesCS2B01G585200 chr6A 95.826 599 15 4 3756 4353 527457297 527456708 0.000000e+00 959.0
11 TraesCS2B01G585200 chr6A 95.326 599 18 6 3756 4353 527380500 527379911 0.000000e+00 942.0
12 TraesCS2B01G585200 chr6A 97.143 70 2 0 4397 4466 527379917 527379848 7.970000e-23 119.0
13 TraesCS2B01G585200 chr6A 97.143 70 2 0 4397 4466 527456714 527456645 7.970000e-23 119.0
14 TraesCS2B01G585200 chr3B 86.875 640 68 11 4 633 313809567 313808934 0.000000e+00 702.0
15 TraesCS2B01G585200 chr3B 85.202 642 72 14 1 631 244388105 244388734 4.950000e-179 638.0
16 TraesCS2B01G585200 chr5B 86.006 636 73 10 7 632 369163451 369162822 0.000000e+00 667.0
17 TraesCS2B01G585200 chr5B 85.953 598 74 9 1 595 549584348 549584938 8.280000e-177 630.0
18 TraesCS2B01G585200 chr5B 94.872 78 3 1 4461 4537 650345380 650345303 2.220000e-23 121.0
19 TraesCS2B01G585200 chr5B 94.805 77 3 1 4461 4537 660271179 660271254 7.970000e-23 119.0
20 TraesCS2B01G585200 chr5B 94.667 75 2 1 4463 4537 266015099 266015027 1.030000e-21 115.0
21 TraesCS2B01G585200 chr5D 85.093 644 75 14 4 633 400367010 400366374 4.950000e-179 638.0
22 TraesCS2B01G585200 chr5D 96.000 75 2 1 4464 4537 169535168 169535242 2.220000e-23 121.0
23 TraesCS2B01G585200 chr3D 84.711 641 79 14 4 631 480356553 480355919 1.390000e-174 623.0
24 TraesCS2B01G585200 chr4A 88.571 315 25 8 3999 4309 398499616 398499309 5.540000e-99 372.0
25 TraesCS2B01G585200 chr4B 97.297 74 1 1 4464 4537 668868218 668868290 1.710000e-24 124.0
26 TraesCS2B01G585200 chr4B 93.671 79 1 2 4463 4537 466966632 466966710 1.030000e-21 115.0
27 TraesCS2B01G585200 chr1B 94.805 77 1 1 4464 4537 579792165 579792241 2.870000e-22 117.0
28 TraesCS2B01G585200 chr1B 82.609 138 16 5 1291 1428 661597744 661597615 1.030000e-21 115.0
29 TraesCS2B01G585200 chr7B 94.737 76 1 3 4462 4537 508830642 508830714 1.030000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G585200 chr2B 772048785 772053321 4536 False 8379.0 8379 100.000000 1 4537 1 chr2B.!!$F2 4536
1 TraesCS2B01G585200 chr2B 104932754 104933388 634 False 695.0 695 86.698000 6 633 1 chr2B.!!$F1 627
2 TraesCS2B01G585200 chr2A 758921975 758925601 3626 True 1556.7 4460 89.872333 728 4466 3 chr2A.!!$R1 3738
3 TraesCS2B01G585200 chr2D 629201891 629205330 3439 True 2298.0 4281 85.517000 728 4466 2 chr2D.!!$R1 3738
4 TraesCS2B01G585200 chr2D 353543938 353544574 636 False 673.0 673 86.003000 1 631 1 chr2D.!!$F1 630
5 TraesCS2B01G585200 chr2D 387480301 387480937 636 False 662.0 662 85.647000 1 631 1 chr2D.!!$F2 630
6 TraesCS2B01G585200 chr6A 527456645 527457297 652 True 539.0 959 96.484500 3756 4466 2 chr6A.!!$R2 710
7 TraesCS2B01G585200 chr6A 527379848 527380500 652 True 530.5 942 96.234500 3756 4466 2 chr6A.!!$R1 710
8 TraesCS2B01G585200 chr3B 313808934 313809567 633 True 702.0 702 86.875000 4 633 1 chr3B.!!$R1 629
9 TraesCS2B01G585200 chr3B 244388105 244388734 629 False 638.0 638 85.202000 1 631 1 chr3B.!!$F1 630
10 TraesCS2B01G585200 chr5B 369162822 369163451 629 True 667.0 667 86.006000 7 632 1 chr5B.!!$R2 625
11 TraesCS2B01G585200 chr5B 549584348 549584938 590 False 630.0 630 85.953000 1 595 1 chr5B.!!$F1 594
12 TraesCS2B01G585200 chr5D 400366374 400367010 636 True 638.0 638 85.093000 4 633 1 chr5D.!!$R1 629
13 TraesCS2B01G585200 chr3D 480355919 480356553 634 True 623.0 623 84.711000 4 631 1 chr3D.!!$R1 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
683 704 0.034670 GGCCTGAGACCAGCAGAATT 60.035 55.0 0.00 0.0 39.07 2.17 F
720 741 0.113190 CTTTGGTTGCTCCCCCTCTT 59.887 55.0 0.00 0.0 34.77 2.85 F
1610 1683 0.390860 TTTGGTGCCGTCAATTTGGG 59.609 50.0 0.00 0.0 0.00 4.12 F
1913 1999 0.394565 ACCAAGTGCACCAGTCTCTC 59.605 55.0 14.63 0.0 0.00 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2457 2548 0.107993 CGAAGAGCATGAAGAGGGCA 60.108 55.000 0.0 0.0 0.00 5.36 R
2518 2609 2.094286 ACAGAGCACAGAGAAATCCTCG 60.094 50.000 0.0 0.0 46.49 4.63 R
2597 2688 3.425193 CGGCGAAAAGGAAACAAAATCAG 59.575 43.478 0.0 0.0 0.00 2.90 R
3875 3967 4.097741 CACCACCAATCTTGAAAGAACACA 59.902 41.667 0.0 0.0 38.77 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 73 2.996395 TCGTCTCCCGACTAGGCT 59.004 61.111 0.00 0.00 41.60 4.58
74 78 4.753662 TCCCGACTAGGCTGCCGT 62.754 66.667 13.96 5.91 39.21 5.68
131 136 2.029073 CTGCGGTGTCGAAGGTGT 59.971 61.111 0.00 0.00 38.37 4.16
237 243 1.067416 GAGGCGGCACATCGACATA 59.933 57.895 13.08 0.00 41.34 2.29
273 279 2.041405 GGCTAGTGAGAGGGGGCT 60.041 66.667 0.00 0.00 0.00 5.19
284 290 2.043248 GGGGGCTAGACGAGTGGA 60.043 66.667 0.00 0.00 0.00 4.02
361 368 1.227853 AAAAGGAGCGCGTGAACCT 60.228 52.632 8.43 8.80 0.00 3.50
393 400 2.556287 GAGCGTCAAAACCAGCGG 59.444 61.111 0.00 0.00 34.34 5.52
468 480 0.322322 AAAACCAGGGCGACGACATA 59.678 50.000 1.63 0.00 0.00 2.29
469 481 0.539986 AAACCAGGGCGACGACATAT 59.460 50.000 1.63 0.00 0.00 1.78
472 484 1.441729 CAGGGCGACGACATATGGT 59.558 57.895 1.63 0.00 0.00 3.55
500 512 1.296649 GATCTAAAACGCGCACGGC 60.297 57.895 5.73 0.00 46.04 5.68
502 514 3.419759 CTAAAACGCGCACGGCCT 61.420 61.111 5.73 0.00 46.04 5.19
510 522 2.976840 GCGCACGGCCTTGAAATGA 61.977 57.895 14.50 0.00 34.80 2.57
523 535 2.147150 TGAAATGAATCGGCGTGTTGA 58.853 42.857 6.85 0.00 0.00 3.18
543 555 0.730265 GCGCATTGTCGACCCAAATA 59.270 50.000 14.12 0.00 0.00 1.40
633 654 3.509740 GACCCGTTAGAGTTGCTCTTAC 58.490 50.000 3.87 4.80 41.50 2.34
634 655 2.233186 ACCCGTTAGAGTTGCTCTTACC 59.767 50.000 3.87 0.00 41.50 2.85
635 656 2.232941 CCCGTTAGAGTTGCTCTTACCA 59.767 50.000 3.87 0.00 41.50 3.25
636 657 3.118738 CCCGTTAGAGTTGCTCTTACCAT 60.119 47.826 3.87 0.00 41.50 3.55
637 658 4.113354 CCGTTAGAGTTGCTCTTACCATC 58.887 47.826 3.87 0.00 41.50 3.51
638 659 4.113354 CGTTAGAGTTGCTCTTACCATCC 58.887 47.826 3.87 0.00 41.50 3.51
639 660 4.443621 GTTAGAGTTGCTCTTACCATCCC 58.556 47.826 3.87 0.00 41.50 3.85
640 661 2.839228 AGAGTTGCTCTTACCATCCCT 58.161 47.619 0.00 0.00 37.60 4.20
641 662 2.503356 AGAGTTGCTCTTACCATCCCTG 59.497 50.000 0.00 0.00 37.60 4.45
642 663 1.065126 AGTTGCTCTTACCATCCCTGC 60.065 52.381 0.00 0.00 0.00 4.85
643 664 0.991146 TTGCTCTTACCATCCCTGCA 59.009 50.000 0.00 0.00 0.00 4.41
644 665 0.991146 TGCTCTTACCATCCCTGCAA 59.009 50.000 0.00 0.00 0.00 4.08
645 666 1.565759 TGCTCTTACCATCCCTGCAAT 59.434 47.619 0.00 0.00 0.00 3.56
646 667 2.777114 TGCTCTTACCATCCCTGCAATA 59.223 45.455 0.00 0.00 0.00 1.90
647 668 3.395607 TGCTCTTACCATCCCTGCAATAT 59.604 43.478 0.00 0.00 0.00 1.28
648 669 4.141181 TGCTCTTACCATCCCTGCAATATT 60.141 41.667 0.00 0.00 0.00 1.28
649 670 4.457257 GCTCTTACCATCCCTGCAATATTC 59.543 45.833 0.00 0.00 0.00 1.75
650 671 4.985538 TCTTACCATCCCTGCAATATTCC 58.014 43.478 0.00 0.00 0.00 3.01
651 672 4.665009 TCTTACCATCCCTGCAATATTCCT 59.335 41.667 0.00 0.00 0.00 3.36
652 673 3.234234 ACCATCCCTGCAATATTCCTG 57.766 47.619 0.00 0.00 0.00 3.86
653 674 2.515429 ACCATCCCTGCAATATTCCTGT 59.485 45.455 0.00 0.00 0.00 4.00
654 675 2.889045 CCATCCCTGCAATATTCCTGTG 59.111 50.000 0.00 0.00 0.00 3.66
655 676 3.435457 CCATCCCTGCAATATTCCTGTGA 60.435 47.826 0.00 0.00 0.00 3.58
656 677 4.209538 CATCCCTGCAATATTCCTGTGAA 58.790 43.478 0.00 0.00 34.33 3.18
657 678 3.620488 TCCCTGCAATATTCCTGTGAAC 58.380 45.455 0.00 0.00 32.13 3.18
658 679 2.689983 CCCTGCAATATTCCTGTGAACC 59.310 50.000 0.00 0.00 32.13 3.62
659 680 3.355378 CCTGCAATATTCCTGTGAACCA 58.645 45.455 0.00 0.00 32.13 3.67
660 681 3.763360 CCTGCAATATTCCTGTGAACCAA 59.237 43.478 0.00 0.00 32.13 3.67
661 682 4.220382 CCTGCAATATTCCTGTGAACCAAA 59.780 41.667 0.00 0.00 32.13 3.28
662 683 5.389859 TGCAATATTCCTGTGAACCAAAG 57.610 39.130 0.00 0.00 32.13 2.77
663 684 5.076182 TGCAATATTCCTGTGAACCAAAGA 58.924 37.500 0.00 0.00 32.13 2.52
664 685 5.183713 TGCAATATTCCTGTGAACCAAAGAG 59.816 40.000 0.00 0.00 32.13 2.85
665 686 5.393461 GCAATATTCCTGTGAACCAAAGAGG 60.393 44.000 0.00 0.00 45.67 3.69
666 687 1.981256 TTCCTGTGAACCAAAGAGGC 58.019 50.000 0.00 0.00 43.14 4.70
667 688 0.110486 TCCTGTGAACCAAAGAGGCC 59.890 55.000 0.00 0.00 43.14 5.19
668 689 0.111253 CCTGTGAACCAAAGAGGCCT 59.889 55.000 3.86 3.86 43.14 5.19
669 690 1.242076 CTGTGAACCAAAGAGGCCTG 58.758 55.000 12.00 0.00 43.14 4.85
670 691 0.843309 TGTGAACCAAAGAGGCCTGA 59.157 50.000 12.00 0.00 43.14 3.86
671 692 1.202806 TGTGAACCAAAGAGGCCTGAG 60.203 52.381 12.00 0.00 43.14 3.35
672 693 1.072331 GTGAACCAAAGAGGCCTGAGA 59.928 52.381 12.00 0.00 43.14 3.27
673 694 1.072331 TGAACCAAAGAGGCCTGAGAC 59.928 52.381 12.00 0.00 43.14 3.36
674 695 0.402121 AACCAAAGAGGCCTGAGACC 59.598 55.000 12.00 0.00 43.14 3.85
675 696 0.768221 ACCAAAGAGGCCTGAGACCA 60.768 55.000 12.00 0.00 43.14 4.02
676 697 0.035630 CCAAAGAGGCCTGAGACCAG 60.036 60.000 12.00 0.00 40.09 4.00
677 698 0.676151 CAAAGAGGCCTGAGACCAGC 60.676 60.000 12.00 0.00 39.07 4.85
678 699 1.130054 AAAGAGGCCTGAGACCAGCA 61.130 55.000 12.00 0.00 39.07 4.41
679 700 1.551908 AAGAGGCCTGAGACCAGCAG 61.552 60.000 12.00 0.00 39.07 4.24
680 701 1.986757 GAGGCCTGAGACCAGCAGA 60.987 63.158 12.00 0.00 39.07 4.26
681 702 1.537397 AGGCCTGAGACCAGCAGAA 60.537 57.895 3.11 0.00 39.07 3.02
682 703 0.913451 AGGCCTGAGACCAGCAGAAT 60.913 55.000 3.11 0.00 39.07 2.40
683 704 0.034670 GGCCTGAGACCAGCAGAATT 60.035 55.000 0.00 0.00 39.07 2.17
684 705 1.377536 GCCTGAGACCAGCAGAATTC 58.622 55.000 0.00 0.00 39.07 2.17
685 706 2.016096 GCCTGAGACCAGCAGAATTCC 61.016 57.143 0.65 0.00 39.07 3.01
686 707 1.558756 CCTGAGACCAGCAGAATTCCT 59.441 52.381 0.65 0.00 39.07 3.36
687 708 2.768527 CCTGAGACCAGCAGAATTCCTA 59.231 50.000 0.65 0.00 39.07 2.94
688 709 3.390639 CCTGAGACCAGCAGAATTCCTAT 59.609 47.826 0.65 0.00 39.07 2.57
689 710 4.502950 CCTGAGACCAGCAGAATTCCTATC 60.503 50.000 0.65 0.00 39.07 2.08
690 711 3.068732 TGAGACCAGCAGAATTCCTATCG 59.931 47.826 0.65 0.00 0.00 2.92
691 712 3.034635 AGACCAGCAGAATTCCTATCGT 58.965 45.455 0.65 0.00 0.00 3.73
692 713 3.068873 AGACCAGCAGAATTCCTATCGTC 59.931 47.826 0.65 3.41 0.00 4.20
693 714 2.103263 ACCAGCAGAATTCCTATCGTCC 59.897 50.000 0.65 0.00 0.00 4.79
694 715 2.103094 CCAGCAGAATTCCTATCGTCCA 59.897 50.000 0.65 0.00 0.00 4.02
695 716 3.126831 CAGCAGAATTCCTATCGTCCAC 58.873 50.000 0.65 0.00 0.00 4.02
696 717 2.103263 AGCAGAATTCCTATCGTCCACC 59.897 50.000 0.65 0.00 0.00 4.61
697 718 2.103263 GCAGAATTCCTATCGTCCACCT 59.897 50.000 0.65 0.00 0.00 4.00
698 719 3.800604 GCAGAATTCCTATCGTCCACCTC 60.801 52.174 0.65 0.00 0.00 3.85
699 720 3.384789 CAGAATTCCTATCGTCCACCTCA 59.615 47.826 0.65 0.00 0.00 3.86
700 721 3.385111 AGAATTCCTATCGTCCACCTCAC 59.615 47.826 0.65 0.00 0.00 3.51
701 722 1.481871 TTCCTATCGTCCACCTCACC 58.518 55.000 0.00 0.00 0.00 4.02
702 723 0.629596 TCCTATCGTCCACCTCACCT 59.370 55.000 0.00 0.00 0.00 4.00
703 724 1.006758 TCCTATCGTCCACCTCACCTT 59.993 52.381 0.00 0.00 0.00 3.50
704 725 1.831736 CCTATCGTCCACCTCACCTTT 59.168 52.381 0.00 0.00 0.00 3.11
705 726 2.418746 CCTATCGTCCACCTCACCTTTG 60.419 54.545 0.00 0.00 0.00 2.77
706 727 0.324943 ATCGTCCACCTCACCTTTGG 59.675 55.000 0.00 0.00 0.00 3.28
707 728 1.052124 TCGTCCACCTCACCTTTGGT 61.052 55.000 0.00 0.00 35.62 3.67
708 729 0.179029 CGTCCACCTCACCTTTGGTT 60.179 55.000 0.00 0.00 31.02 3.67
709 730 1.318576 GTCCACCTCACCTTTGGTTG 58.681 55.000 0.00 0.00 31.02 3.77
710 731 0.467290 TCCACCTCACCTTTGGTTGC 60.467 55.000 0.00 0.00 31.02 4.17
711 732 0.468029 CCACCTCACCTTTGGTTGCT 60.468 55.000 0.00 0.00 31.02 3.91
712 733 0.954452 CACCTCACCTTTGGTTGCTC 59.046 55.000 0.00 0.00 31.02 4.26
713 734 0.178990 ACCTCACCTTTGGTTGCTCC 60.179 55.000 0.00 0.00 31.02 4.70
714 735 0.895559 CCTCACCTTTGGTTGCTCCC 60.896 60.000 0.00 0.00 31.02 4.30
715 736 0.895559 CTCACCTTTGGTTGCTCCCC 60.896 60.000 0.00 0.00 31.02 4.81
716 737 1.908299 CACCTTTGGTTGCTCCCCC 60.908 63.158 0.00 0.00 31.02 5.40
717 738 2.091283 ACCTTTGGTTGCTCCCCCT 61.091 57.895 0.00 0.00 27.29 4.79
718 739 1.304464 CCTTTGGTTGCTCCCCCTC 60.304 63.158 0.00 0.00 34.77 4.30
719 740 1.770324 CTTTGGTTGCTCCCCCTCT 59.230 57.895 0.00 0.00 34.77 3.69
720 741 0.113190 CTTTGGTTGCTCCCCCTCTT 59.887 55.000 0.00 0.00 34.77 2.85
721 742 0.560688 TTTGGTTGCTCCCCCTCTTT 59.439 50.000 0.00 0.00 34.77 2.52
722 743 0.560688 TTGGTTGCTCCCCCTCTTTT 59.439 50.000 0.00 0.00 34.77 2.27
723 744 0.560688 TGGTTGCTCCCCCTCTTTTT 59.439 50.000 0.00 0.00 34.77 1.94
724 745 1.257743 GGTTGCTCCCCCTCTTTTTC 58.742 55.000 0.00 0.00 0.00 2.29
725 746 1.203063 GGTTGCTCCCCCTCTTTTTCT 60.203 52.381 0.00 0.00 0.00 2.52
726 747 2.163509 GTTGCTCCCCCTCTTTTTCTC 58.836 52.381 0.00 0.00 0.00 2.87
735 756 1.497991 CTCTTTTTCTCGGTCACGCA 58.502 50.000 0.00 0.00 40.69 5.24
757 778 8.580431 ACGCAGCGTGTAATATTTTAATTTTTC 58.420 29.630 22.28 0.00 39.18 2.29
770 791 2.478335 ATTTTTCCTCGCCGCCTCCA 62.478 55.000 0.00 0.00 0.00 3.86
832 861 0.763035 AACTACTCCACCACCACCAC 59.237 55.000 0.00 0.00 0.00 4.16
833 862 1.125711 ACTACTCCACCACCACCACC 61.126 60.000 0.00 0.00 0.00 4.61
834 863 1.074395 TACTCCACCACCACCACCA 60.074 57.895 0.00 0.00 0.00 4.17
837 866 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
838 867 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
840 869 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
841 870 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
843 872 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
844 873 2.203337 CACCACCACCACCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
845 874 3.498071 ACCACCACCACCACCAGG 61.498 66.667 0.00 0.00 42.21 4.45
847 876 3.174987 CACCACCACCACCAGGGA 61.175 66.667 0.00 0.00 41.15 4.20
848 877 2.854032 ACCACCACCACCAGGGAG 60.854 66.667 0.00 0.00 41.15 4.30
858 887 3.164269 CCAGGGAGGTCCATCCGG 61.164 72.222 0.00 0.00 40.56 5.14
859 888 2.365635 CAGGGAGGTCCATCCGGT 60.366 66.667 0.00 0.00 40.56 5.28
879 908 4.856607 CGAGCGCGAGGGAGGAAC 62.857 72.222 12.10 0.00 40.82 3.62
880 909 3.760035 GAGCGCGAGGGAGGAACA 61.760 66.667 12.10 0.00 0.00 3.18
882 911 2.892425 GCGCGAGGGAGGAACATG 60.892 66.667 12.10 0.00 0.00 3.21
884 913 2.892425 GCGAGGGAGGAACATGCG 60.892 66.667 0.00 0.00 0.00 4.73
888 917 2.044946 GGGAGGAACATGCGCCTT 60.045 61.111 4.18 0.00 33.84 4.35
889 918 2.409870 GGGAGGAACATGCGCCTTG 61.410 63.158 4.18 5.26 33.84 3.61
890 919 1.377202 GGAGGAACATGCGCCTTGA 60.377 57.895 13.68 0.00 33.84 3.02
891 920 0.749454 GGAGGAACATGCGCCTTGAT 60.749 55.000 13.68 2.33 33.84 2.57
892 921 1.098050 GAGGAACATGCGCCTTGATT 58.902 50.000 13.68 5.08 33.84 2.57
926 962 2.434359 CTTCGGCGGAGTTCCCAC 60.434 66.667 7.13 0.00 34.14 4.61
931 967 4.717313 GCGGAGTTCCCACCCACC 62.717 72.222 0.00 0.00 34.14 4.61
932 968 2.928396 CGGAGTTCCCACCCACCT 60.928 66.667 0.00 0.00 34.14 4.00
934 970 1.539124 GGAGTTCCCACCCACCTCT 60.539 63.158 0.00 0.00 34.14 3.69
935 971 1.679898 GAGTTCCCACCCACCTCTG 59.320 63.158 0.00 0.00 0.00 3.35
936 972 2.034221 GTTCCCACCCACCTCTGC 59.966 66.667 0.00 0.00 0.00 4.26
937 973 2.121963 TTCCCACCCACCTCTGCT 60.122 61.111 0.00 0.00 0.00 4.24
938 974 2.528818 TTCCCACCCACCTCTGCTG 61.529 63.158 0.00 0.00 0.00 4.41
939 975 2.930019 CCCACCCACCTCTGCTGA 60.930 66.667 0.00 0.00 0.00 4.26
940 976 2.348998 CCACCCACCTCTGCTGAC 59.651 66.667 0.00 0.00 0.00 3.51
941 977 2.047844 CACCCACCTCTGCTGACG 60.048 66.667 0.00 0.00 0.00 4.35
942 978 4.008933 ACCCACCTCTGCTGACGC 62.009 66.667 0.00 0.00 0.00 5.19
943 979 4.767255 CCCACCTCTGCTGACGCC 62.767 72.222 0.00 0.00 34.43 5.68
965 1004 1.583986 CCTCCGATCTCTCATCGCC 59.416 63.158 0.00 0.00 39.95 5.54
968 1007 2.256764 CGATCTCTCATCGCCCCG 59.743 66.667 0.00 0.00 34.66 5.73
969 1008 2.653702 GATCTCTCATCGCCCCGG 59.346 66.667 0.00 0.00 0.00 5.73
1119 1158 2.465920 GCGCGCGAATCGGAATAG 59.534 61.111 37.18 0.00 38.94 1.73
1120 1159 3.000080 GCGCGCGAATCGGAATAGG 62.000 63.158 37.18 0.00 38.94 2.57
1121 1160 1.660575 CGCGCGAATCGGAATAGGT 60.661 57.895 28.94 0.00 38.94 3.08
1122 1161 1.213094 CGCGCGAATCGGAATAGGTT 61.213 55.000 28.94 0.00 38.94 3.50
1149 1188 0.602905 CCAACGGTTTCGAGCTTCCT 60.603 55.000 0.00 0.00 40.11 3.36
1155 1194 0.673956 GTTTCGAGCTTCCTCACCCC 60.674 60.000 0.00 0.00 38.00 4.95
1157 1196 1.827399 TTCGAGCTTCCTCACCCCAC 61.827 60.000 0.00 0.00 38.00 4.61
1161 1200 3.717294 CTTCCTCACCCCACCCCG 61.717 72.222 0.00 0.00 0.00 5.73
1162 1201 4.585216 TTCCTCACCCCACCCCGT 62.585 66.667 0.00 0.00 0.00 5.28
1165 1204 4.329545 CTCACCCCACCCCGTGTG 62.330 72.222 0.00 0.00 45.01 3.82
1206 1273 2.038438 CCCCCATCCCATCTCCCA 60.038 66.667 0.00 0.00 0.00 4.37
1207 1274 2.158810 CCCCCATCCCATCTCCCAG 61.159 68.421 0.00 0.00 0.00 4.45
1208 1275 2.158810 CCCCATCCCATCTCCCAGG 61.159 68.421 0.00 0.00 0.00 4.45
1209 1276 2.158810 CCCATCCCATCTCCCAGGG 61.159 68.421 0.00 0.00 46.90 4.45
1210 1277 1.386485 CCATCCCATCTCCCAGGGT 60.386 63.158 5.01 0.00 45.64 4.34
1211 1278 1.422161 CCATCCCATCTCCCAGGGTC 61.422 65.000 5.01 0.00 45.64 4.46
1212 1279 1.073397 ATCCCATCTCCCAGGGTCC 60.073 63.158 5.01 0.00 45.64 4.46
1214 1281 3.866582 CCATCTCCCAGGGTCCGC 61.867 72.222 5.01 0.00 0.00 5.54
1241 1308 1.469595 CCCGTTCCGTTTAGCGACATA 60.470 52.381 0.00 0.00 44.77 2.29
1242 1309 1.850441 CCGTTCCGTTTAGCGACATAG 59.150 52.381 0.00 0.00 44.77 2.23
1243 1310 2.523015 CGTTCCGTTTAGCGACATAGT 58.477 47.619 0.00 0.00 44.77 2.12
1244 1311 3.487376 CCGTTCCGTTTAGCGACATAGTA 60.487 47.826 0.00 0.00 44.77 1.82
1273 1340 3.723260 TGAACACAACTCACGAGCAATA 58.277 40.909 0.00 0.00 0.00 1.90
1290 1357 3.626670 GCAATAAGCAGAGCATCAAGTCT 59.373 43.478 0.00 0.00 44.79 3.24
1316 1383 0.972883 TTTGGCGATGAAAAAGGGGG 59.027 50.000 0.00 0.00 0.00 5.40
1323 1390 4.403113 GGCGATGAAAAAGGGGGTTTATTA 59.597 41.667 0.00 0.00 0.00 0.98
1349 1417 7.971168 ACAAATTGATAGAGTTACAGTCGAGAG 59.029 37.037 0.00 0.00 0.00 3.20
1350 1418 7.867305 AATTGATAGAGTTACAGTCGAGAGA 57.133 36.000 0.00 0.00 38.16 3.10
1364 1432 2.423892 TCGAGAGACAAAAGATCCTCCG 59.576 50.000 0.00 0.00 33.31 4.63
1365 1433 2.423892 CGAGAGACAAAAGATCCTCCGA 59.576 50.000 0.00 0.00 0.00 4.55
1366 1434 3.732471 CGAGAGACAAAAGATCCTCCGAC 60.732 52.174 0.00 0.00 0.00 4.79
1388 1456 3.562973 CACATGGTGTTCCTAGATGCATC 59.437 47.826 19.37 19.37 34.23 3.91
1389 1457 3.144506 CATGGTGTTCCTAGATGCATCC 58.855 50.000 23.06 7.23 34.23 3.51
1390 1458 2.195727 TGGTGTTCCTAGATGCATCCA 58.804 47.619 23.06 9.05 34.23 3.41
1391 1459 2.779430 TGGTGTTCCTAGATGCATCCAT 59.221 45.455 23.06 8.39 34.23 3.41
1392 1460 3.181451 TGGTGTTCCTAGATGCATCCATC 60.181 47.826 23.06 13.05 40.23 3.51
1400 1468 2.048444 GATGCATCCATCCACACAGT 57.952 50.000 16.23 0.00 41.62 3.55
1413 1481 1.579932 CACAGTCGTGGTACGCTCT 59.420 57.895 0.00 0.00 42.21 4.09
1414 1482 0.729478 CACAGTCGTGGTACGCTCTG 60.729 60.000 17.44 17.44 43.21 3.35
1429 1497 1.783711 GCTCTGTGCGACTATGATTCG 59.216 52.381 0.00 0.00 39.56 3.34
1434 1502 4.334481 TCTGTGCGACTATGATTCGTCTTA 59.666 41.667 0.00 0.00 38.77 2.10
1452 1520 5.220912 CGTCTTATACGTGGTGATGGAGTTA 60.221 44.000 0.00 0.00 46.72 2.24
1457 1525 2.205074 CGTGGTGATGGAGTTATGAGC 58.795 52.381 0.00 0.00 0.00 4.26
1502 1575 2.910199 GCTCTATGCAACTCATGGTGA 58.090 47.619 0.00 0.00 42.31 4.02
1503 1576 3.474600 GCTCTATGCAACTCATGGTGAT 58.525 45.455 0.00 0.00 42.31 3.06
1504 1577 3.250280 GCTCTATGCAACTCATGGTGATG 59.750 47.826 0.00 0.00 42.31 3.07
1505 1578 3.812262 TCTATGCAACTCATGGTGATGG 58.188 45.455 0.00 0.00 36.63 3.51
1531 1604 0.457337 GCTGCTGCAATTCTTTCCCG 60.457 55.000 11.11 0.00 39.41 5.14
1536 1609 1.672881 CTGCAATTCTTTCCCGGCTAG 59.327 52.381 0.00 0.00 0.00 3.42
1541 1614 4.261197 GCAATTCTTTCCCGGCTAGTATTG 60.261 45.833 16.53 16.53 32.88 1.90
1543 1616 1.140252 TCTTTCCCGGCTAGTATTGGC 59.860 52.381 0.00 0.00 0.00 4.52
1546 1619 1.071471 CCCGGCTAGTATTGGCCTG 59.929 63.158 10.87 4.13 45.57 4.85
1598 1671 1.508088 CAGAATCGGGCTTTGGTGC 59.492 57.895 0.00 0.00 0.00 5.01
1610 1683 0.390860 TTTGGTGCCGTCAATTTGGG 59.609 50.000 0.00 0.00 0.00 4.12
1617 1690 1.359848 CCGTCAATTTGGGTCGAGAG 58.640 55.000 0.00 0.00 0.00 3.20
1618 1691 1.067142 CCGTCAATTTGGGTCGAGAGA 60.067 52.381 0.00 0.00 38.16 3.10
1653 1734 3.876309 ATGTAACCAAGGTCACCACTT 57.124 42.857 0.00 0.00 0.00 3.16
1656 1737 2.348411 AACCAAGGTCACCACTTCAG 57.652 50.000 0.00 0.00 0.00 3.02
1690 1771 5.592282 TGCAAAGTCAATGTAGACAGGAAAA 59.408 36.000 0.00 0.00 40.98 2.29
1694 1775 9.533253 CAAAGTCAATGTAGACAGGAAAATTTT 57.467 29.630 2.28 2.28 40.98 1.82
1701 1782 4.541973 AGACAGGAAAATTTTGGGCATC 57.458 40.909 8.47 0.00 0.00 3.91
1713 1795 9.448438 AAAATTTTGGGCATCTTTACCTTTATC 57.552 29.630 1.75 0.00 0.00 1.75
1732 1814 9.747293 CCTTTATCAGGCTAACTTACTTACTAC 57.253 37.037 0.00 0.00 35.13 2.73
1788 1874 5.993441 TGCTACAAAGGGAGTAACTGTAAAC 59.007 40.000 0.00 0.00 0.00 2.01
1799 1885 7.148457 GGGAGTAACTGTAAACTATGCAGAAAC 60.148 40.741 0.00 0.00 43.78 2.78
1805 1891 6.595716 ACTGTAAACTATGCAGAAACTCATCC 59.404 38.462 0.00 0.00 43.78 3.51
1820 1906 4.273318 ACTCATCCCAAAATTGCTCCTAC 58.727 43.478 0.00 0.00 0.00 3.18
1821 1907 4.263905 ACTCATCCCAAAATTGCTCCTACA 60.264 41.667 0.00 0.00 0.00 2.74
1822 1908 4.016444 TCATCCCAAAATTGCTCCTACAC 58.984 43.478 0.00 0.00 0.00 2.90
1833 1919 1.489481 CTCCTACACCATCAGCCTCA 58.511 55.000 0.00 0.00 0.00 3.86
1834 1920 1.833630 CTCCTACACCATCAGCCTCAA 59.166 52.381 0.00 0.00 0.00 3.02
1860 1946 1.029681 AGGGCGGTGTTTTCAGTTTC 58.970 50.000 0.00 0.00 0.00 2.78
1863 1949 1.404035 GGCGGTGTTTTCAGTTTCTGT 59.596 47.619 0.00 0.00 32.61 3.41
1864 1950 2.614983 GGCGGTGTTTTCAGTTTCTGTA 59.385 45.455 0.00 0.00 32.61 2.74
1865 1951 3.065648 GGCGGTGTTTTCAGTTTCTGTAA 59.934 43.478 0.00 0.00 32.61 2.41
1866 1952 4.261447 GGCGGTGTTTTCAGTTTCTGTAAT 60.261 41.667 0.00 0.00 32.61 1.89
1867 1953 5.278604 GCGGTGTTTTCAGTTTCTGTAATT 58.721 37.500 0.00 0.00 32.61 1.40
1868 1954 5.398416 GCGGTGTTTTCAGTTTCTGTAATTC 59.602 40.000 0.00 0.00 32.61 2.17
1869 1955 6.725246 CGGTGTTTTCAGTTTCTGTAATTCT 58.275 36.000 0.00 0.00 32.61 2.40
1870 1956 6.632834 CGGTGTTTTCAGTTTCTGTAATTCTG 59.367 38.462 0.00 0.00 32.61 3.02
1889 1975 8.918202 AATTCTGTTACTTGGATTGTGAACTA 57.082 30.769 0.00 0.00 0.00 2.24
1913 1999 0.394565 ACCAAGTGCACCAGTCTCTC 59.605 55.000 14.63 0.00 0.00 3.20
1914 2000 0.683973 CCAAGTGCACCAGTCTCTCT 59.316 55.000 14.63 0.00 0.00 3.10
1915 2001 1.607509 CCAAGTGCACCAGTCTCTCTG 60.608 57.143 14.63 0.00 43.27 3.35
1916 2002 1.342496 CAAGTGCACCAGTCTCTCTGA 59.658 52.381 14.63 0.00 46.27 3.27
1987 2078 8.244113 GCTTTTATAGCTCACCAACATAAACTT 58.756 33.333 0.00 0.00 46.77 2.66
2030 2121 7.775093 AGTTATTGTGTGTATGGATTACTGCAT 59.225 33.333 0.00 0.00 37.23 3.96
2070 2161 6.223120 GCCACCAATAATTGTTTCTGACTTT 58.777 36.000 0.00 0.00 0.00 2.66
2113 2204 8.970859 AAAGAGTGGAATTTATAGGATCTGTG 57.029 34.615 0.00 0.00 0.00 3.66
2115 2206 6.846505 AGAGTGGAATTTATAGGATCTGTGGA 59.153 38.462 0.00 0.00 0.00 4.02
2116 2207 7.515514 AGAGTGGAATTTATAGGATCTGTGGAT 59.484 37.037 0.00 0.00 34.45 3.41
2117 2208 8.050316 AGTGGAATTTATAGGATCTGTGGATT 57.950 34.615 0.00 0.00 31.46 3.01
2131 2222 5.748402 TCTGTGGATTAAATGACTGCTCAT 58.252 37.500 0.00 0.00 38.94 2.90
2134 2225 7.828717 TCTGTGGATTAAATGACTGCTCATAAA 59.171 33.333 0.00 0.00 35.96 1.40
2137 2228 7.800380 GTGGATTAAATGACTGCTCATAAATCG 59.200 37.037 12.74 0.00 38.66 3.34
2138 2229 6.798959 GGATTAAATGACTGCTCATAAATCGC 59.201 38.462 12.74 0.00 38.66 4.58
2146 2237 2.158827 TGCTCATAAATCGCCAAGCCTA 60.159 45.455 0.00 0.00 0.00 3.93
2149 2240 1.069906 CATAAATCGCCAAGCCTACGC 60.070 52.381 0.00 0.00 0.00 4.42
2175 2266 6.641169 TGTGGTTAGCAACACAAATAATGA 57.359 33.333 0.00 0.00 43.91 2.57
2176 2267 6.442952 TGTGGTTAGCAACACAAATAATGAC 58.557 36.000 0.00 0.00 43.91 3.06
2177 2268 5.567534 GTGGTTAGCAACACAAATAATGACG 59.432 40.000 0.00 0.00 37.54 4.35
2178 2269 4.557301 GGTTAGCAACACAAATAATGACGC 59.443 41.667 0.00 0.00 0.00 5.19
2179 2270 3.913548 AGCAACACAAATAATGACGCA 57.086 38.095 0.00 0.00 0.00 5.24
2180 2271 3.825308 AGCAACACAAATAATGACGCAG 58.175 40.909 0.00 0.00 0.00 5.18
2181 2272 2.342354 GCAACACAAATAATGACGCAGC 59.658 45.455 0.00 0.00 0.00 5.25
2182 2273 2.525750 ACACAAATAATGACGCAGCG 57.474 45.000 14.82 14.82 0.00 5.18
2183 2274 1.130373 ACACAAATAATGACGCAGCGG 59.870 47.619 21.15 0.70 0.00 5.52
2184 2275 1.396648 CACAAATAATGACGCAGCGGA 59.603 47.619 21.15 5.37 0.00 5.54
2185 2276 2.080693 ACAAATAATGACGCAGCGGAA 58.919 42.857 21.15 6.98 0.00 4.30
2186 2277 2.486203 ACAAATAATGACGCAGCGGAAA 59.514 40.909 21.15 4.07 0.00 3.13
2187 2278 3.128589 ACAAATAATGACGCAGCGGAAAT 59.871 39.130 21.15 6.53 0.00 2.17
2188 2279 4.334203 ACAAATAATGACGCAGCGGAAATA 59.666 37.500 21.15 7.40 0.00 1.40
2189 2280 4.732285 AATAATGACGCAGCGGAAATAG 57.268 40.909 21.15 0.00 0.00 1.73
2190 2281 2.024176 AATGACGCAGCGGAAATAGT 57.976 45.000 21.15 0.00 0.00 2.12
2191 2282 2.024176 ATGACGCAGCGGAAATAGTT 57.976 45.000 21.15 0.00 0.00 2.24
2192 2283 1.803334 TGACGCAGCGGAAATAGTTT 58.197 45.000 21.15 0.00 0.00 2.66
2193 2284 2.962125 TGACGCAGCGGAAATAGTTTA 58.038 42.857 21.15 0.00 0.00 2.01
2194 2285 3.327626 TGACGCAGCGGAAATAGTTTAA 58.672 40.909 21.15 0.00 0.00 1.52
2195 2286 3.936453 TGACGCAGCGGAAATAGTTTAAT 59.064 39.130 21.15 0.00 0.00 1.40
2196 2287 4.393680 TGACGCAGCGGAAATAGTTTAATT 59.606 37.500 21.15 0.00 0.00 1.40
2197 2288 5.106475 TGACGCAGCGGAAATAGTTTAATTT 60.106 36.000 21.15 0.00 0.00 1.82
2198 2289 5.092781 ACGCAGCGGAAATAGTTTAATTTG 58.907 37.500 21.15 0.00 0.00 2.32
2199 2290 4.027702 CGCAGCGGAAATAGTTTAATTTGC 60.028 41.667 7.00 0.00 34.79 3.68
2200 2291 5.102313 GCAGCGGAAATAGTTTAATTTGCT 58.898 37.500 0.00 0.00 35.66 3.91
2201 2292 6.262601 GCAGCGGAAATAGTTTAATTTGCTA 58.737 36.000 0.00 0.00 35.66 3.49
2202 2293 6.750039 GCAGCGGAAATAGTTTAATTTGCTAA 59.250 34.615 0.00 0.00 35.66 3.09
2203 2294 7.435192 GCAGCGGAAATAGTTTAATTTGCTAAT 59.565 33.333 0.00 0.00 35.66 1.73
2204 2295 8.958043 CAGCGGAAATAGTTTAATTTGCTAATC 58.042 33.333 0.00 0.00 35.66 1.75
2237 2328 3.674528 ATGCTCTAATCACCATCCTCG 57.325 47.619 0.00 0.00 0.00 4.63
2265 2356 5.694910 CGTTTAGGTAGAACAATGTGTCACT 59.305 40.000 4.27 0.00 0.00 3.41
2319 2410 1.080093 CTGCGGTCTTCGGCTTGTA 60.080 57.895 0.00 0.00 39.97 2.41
2450 2541 1.165270 CGGGATGGGTTCTTTGTGAC 58.835 55.000 0.00 0.00 0.00 3.67
2457 2548 2.024414 GGGTTCTTTGTGACTGTGCTT 58.976 47.619 0.00 0.00 0.00 3.91
2459 2550 2.454055 GTTCTTTGTGACTGTGCTTGC 58.546 47.619 0.00 0.00 0.00 4.01
2518 2609 6.851222 TCTCTCACTGTCATTTTCTGAAAC 57.149 37.500 1.58 0.00 35.07 2.78
2524 2615 5.180117 CACTGTCATTTTCTGAAACGAGGAT 59.820 40.000 1.58 0.00 35.07 3.24
2527 2618 6.668323 TGTCATTTTCTGAAACGAGGATTTC 58.332 36.000 1.58 0.00 38.77 2.17
2528 2619 6.486657 TGTCATTTTCTGAAACGAGGATTTCT 59.513 34.615 1.58 0.00 39.02 2.52
2529 2620 7.018235 GTCATTTTCTGAAACGAGGATTTCTC 58.982 38.462 1.58 0.00 39.02 2.87
2530 2621 6.936900 TCATTTTCTGAAACGAGGATTTCTCT 59.063 34.615 1.58 0.00 40.30 3.10
2531 2622 6.545504 TTTTCTGAAACGAGGATTTCTCTG 57.454 37.500 1.58 0.00 40.30 3.35
2532 2623 4.873746 TCTGAAACGAGGATTTCTCTGT 57.126 40.909 0.00 0.00 40.30 3.41
2533 2624 4.560128 TCTGAAACGAGGATTTCTCTGTG 58.440 43.478 0.00 0.00 40.30 3.66
2534 2625 3.067106 TGAAACGAGGATTTCTCTGTGC 58.933 45.455 0.00 0.00 40.30 4.57
2550 2641 6.233434 TCTCTGTGCTCTGTTTATTCATGTT 58.767 36.000 0.00 0.00 0.00 2.71
2551 2642 6.712095 TCTCTGTGCTCTGTTTATTCATGTTT 59.288 34.615 0.00 0.00 0.00 2.83
2585 2676 8.021396 GGTTCTAATATGTTTGAAGTGTTCCAC 58.979 37.037 0.00 0.00 31.41 4.02
2701 2792 2.224499 TGGCATCTTTCACTGCACAGTA 60.224 45.455 2.38 0.00 40.20 2.74
2702 2793 2.417933 GGCATCTTTCACTGCACAGTAG 59.582 50.000 2.38 0.00 40.20 2.57
2717 2808 4.609947 CACAGTAGCAGCTCTCTTATCTG 58.390 47.826 0.00 0.69 0.00 2.90
2990 3081 2.946564 TGCACTCTGTTGTATCGTGAG 58.053 47.619 0.00 0.00 0.00 3.51
3113 3204 4.687901 TTTTCTCATCTCTGTGGTCACA 57.312 40.909 3.64 3.64 39.32 3.58
3122 3213 0.029834 CTGTGGTCACAAGTTGCAGC 59.970 55.000 1.81 0.09 41.33 5.25
3264 3355 0.813821 GGCCAGTTCTGCATTCTTCC 59.186 55.000 0.00 0.00 0.00 3.46
3335 3426 4.585581 TCAGTTAATGCGGGTATAGCTGTA 59.414 41.667 12.20 8.27 32.00 2.74
3742 3834 7.931407 TGCACAGATTCGGTATTCTACATTATT 59.069 33.333 0.00 0.00 0.00 1.40
3812 3904 9.386010 ACTAAGTAGACTAGTCTGTGACAATAG 57.614 37.037 31.47 25.11 40.71 1.73
3922 4014 5.480772 GGATACACCAGTATGCACTATAGGT 59.519 44.000 4.43 0.00 45.30 3.08
3997 4090 8.940397 AGATTATGTAATTAATGGGTCCCTTG 57.060 34.615 10.00 0.00 0.00 3.61
4056 4149 7.821846 TCTTTGCTGATTTTACAAACCTGTTTT 59.178 29.630 0.00 0.00 36.96 2.43
4308 4401 7.775093 TCATGGTATTTTCTGATCCTTCGAATT 59.225 33.333 0.00 0.00 0.00 2.17
4343 4436 3.573967 AGAGGTTTTGTTTACATGCAGGG 59.426 43.478 2.31 0.00 0.00 4.45
4351 4444 1.473258 TTACATGCAGGGTCCATTGC 58.527 50.000 2.31 9.95 40.67 3.56
4352 4445 0.625316 TACATGCAGGGTCCATTGCT 59.375 50.000 16.00 2.34 40.87 3.91
4353 4446 0.625316 ACATGCAGGGTCCATTGCTA 59.375 50.000 16.00 5.93 40.87 3.49
4354 4447 1.005805 ACATGCAGGGTCCATTGCTAA 59.994 47.619 16.00 0.93 40.87 3.09
4355 4448 2.313317 CATGCAGGGTCCATTGCTAAT 58.687 47.619 16.00 2.94 40.87 1.73
4356 4449 3.117550 ACATGCAGGGTCCATTGCTAATA 60.118 43.478 16.00 0.03 40.87 0.98
4357 4450 3.882102 TGCAGGGTCCATTGCTAATAT 57.118 42.857 16.00 0.00 40.87 1.28
4358 4451 3.489355 TGCAGGGTCCATTGCTAATATG 58.511 45.455 16.00 0.00 40.87 1.78
4359 4452 3.117550 TGCAGGGTCCATTGCTAATATGT 60.118 43.478 16.00 0.00 40.87 2.29
4360 4453 4.103943 TGCAGGGTCCATTGCTAATATGTA 59.896 41.667 16.00 0.00 40.87 2.29
4361 4454 4.455877 GCAGGGTCCATTGCTAATATGTAC 59.544 45.833 9.68 0.00 37.35 2.90
4362 4455 5.620206 CAGGGTCCATTGCTAATATGTACA 58.380 41.667 0.00 0.00 0.00 2.90
4363 4456 6.240894 CAGGGTCCATTGCTAATATGTACAT 58.759 40.000 13.93 13.93 0.00 2.29
4364 4457 6.716628 CAGGGTCCATTGCTAATATGTACATT 59.283 38.462 14.77 0.00 0.00 2.71
4365 4458 7.231317 CAGGGTCCATTGCTAATATGTACATTT 59.769 37.037 14.77 10.48 0.00 2.32
4366 4459 7.448469 AGGGTCCATTGCTAATATGTACATTTC 59.552 37.037 14.77 0.16 0.00 2.17
4367 4460 7.230510 GGGTCCATTGCTAATATGTACATTTCA 59.769 37.037 14.77 0.00 0.00 2.69
4368 4461 8.076178 GGTCCATTGCTAATATGTACATTTCAC 58.924 37.037 14.77 1.43 0.00 3.18
4369 4462 8.076178 GTCCATTGCTAATATGTACATTTCACC 58.924 37.037 14.77 1.45 0.00 4.02
4370 4463 7.777440 TCCATTGCTAATATGTACATTTCACCA 59.223 33.333 14.77 4.08 0.00 4.17
4371 4464 8.412456 CCATTGCTAATATGTACATTTCACCAA 58.588 33.333 14.77 12.35 0.00 3.67
4372 4465 9.970395 CATTGCTAATATGTACATTTCACCAAT 57.030 29.630 14.77 13.88 0.00 3.16
4374 4467 9.800433 TTGCTAATATGTACATTTCACCAATTG 57.200 29.630 14.77 0.00 0.00 2.32
4375 4468 9.183368 TGCTAATATGTACATTTCACCAATTGA 57.817 29.630 14.77 0.00 0.00 2.57
4376 4469 9.669353 GCTAATATGTACATTTCACCAATTGAG 57.331 33.333 14.77 0.00 34.94 3.02
4378 4471 5.920193 ATGTACATTTCACCAATTGAGGG 57.080 39.130 7.12 0.00 34.94 4.30
4379 4472 4.991776 TGTACATTTCACCAATTGAGGGA 58.008 39.130 7.12 0.51 34.94 4.20
4380 4473 5.389520 TGTACATTTCACCAATTGAGGGAA 58.610 37.500 7.12 7.24 34.94 3.97
4381 4474 5.476599 TGTACATTTCACCAATTGAGGGAAG 59.523 40.000 7.12 2.44 34.94 3.46
4382 4475 3.834231 ACATTTCACCAATTGAGGGAAGG 59.166 43.478 7.12 3.87 34.94 3.46
4383 4476 3.893753 TTTCACCAATTGAGGGAAGGA 57.106 42.857 7.12 0.00 34.94 3.36
4384 4477 4.402616 TTTCACCAATTGAGGGAAGGAT 57.597 40.909 7.12 0.00 34.94 3.24
4385 4478 3.370840 TCACCAATTGAGGGAAGGATG 57.629 47.619 7.12 0.00 0.00 3.51
4386 4479 2.649312 TCACCAATTGAGGGAAGGATGT 59.351 45.455 7.12 0.00 0.00 3.06
4387 4480 3.075882 TCACCAATTGAGGGAAGGATGTT 59.924 43.478 7.12 0.00 0.00 2.71
4388 4481 3.834231 CACCAATTGAGGGAAGGATGTTT 59.166 43.478 7.12 0.00 0.00 2.83
4389 4482 3.834231 ACCAATTGAGGGAAGGATGTTTG 59.166 43.478 7.12 0.00 0.00 2.93
4390 4483 3.196254 CCAATTGAGGGAAGGATGTTTGG 59.804 47.826 7.12 0.00 0.00 3.28
4391 4484 3.833559 ATTGAGGGAAGGATGTTTGGT 57.166 42.857 0.00 0.00 0.00 3.67
4392 4485 3.611025 TTGAGGGAAGGATGTTTGGTT 57.389 42.857 0.00 0.00 0.00 3.67
4393 4486 3.154827 TGAGGGAAGGATGTTTGGTTC 57.845 47.619 0.00 0.00 0.00 3.62
4394 4487 2.716424 TGAGGGAAGGATGTTTGGTTCT 59.284 45.455 0.00 0.00 0.00 3.01
4395 4488 3.084786 GAGGGAAGGATGTTTGGTTCTG 58.915 50.000 0.00 0.00 0.00 3.02
4396 4489 1.546029 GGGAAGGATGTTTGGTTCTGC 59.454 52.381 0.00 0.00 0.00 4.26
4397 4490 2.238521 GGAAGGATGTTTGGTTCTGCA 58.761 47.619 0.00 0.00 0.00 4.41
4398 4491 2.827921 GGAAGGATGTTTGGTTCTGCAT 59.172 45.455 0.00 0.00 0.00 3.96
4399 4492 3.259123 GGAAGGATGTTTGGTTCTGCATT 59.741 43.478 0.00 0.00 0.00 3.56
4400 4493 4.262592 GGAAGGATGTTTGGTTCTGCATTT 60.263 41.667 0.00 0.00 0.00 2.32
4466 4609 7.495934 GGTGATGTAAAATAGCAGTGATGTACT 59.504 37.037 0.00 0.00 41.36 2.73
4467 4610 8.543774 GTGATGTAAAATAGCAGTGATGTACTC 58.456 37.037 0.00 0.00 37.60 2.59
4468 4611 7.710907 TGATGTAAAATAGCAGTGATGTACTCC 59.289 37.037 0.00 0.00 37.60 3.85
4469 4612 6.346096 TGTAAAATAGCAGTGATGTACTCCC 58.654 40.000 0.00 0.00 37.60 4.30
4470 4613 5.700402 AAAATAGCAGTGATGTACTCCCT 57.300 39.130 0.00 0.00 37.60 4.20
4471 4614 4.946478 AATAGCAGTGATGTACTCCCTC 57.054 45.455 0.00 0.00 37.60 4.30
4472 4615 1.490574 AGCAGTGATGTACTCCCTCC 58.509 55.000 0.00 0.00 37.60 4.30
4473 4616 0.103208 GCAGTGATGTACTCCCTCCG 59.897 60.000 0.00 0.00 37.60 4.63
4474 4617 1.475403 CAGTGATGTACTCCCTCCGT 58.525 55.000 0.00 0.00 37.60 4.69
4475 4618 1.825474 CAGTGATGTACTCCCTCCGTT 59.175 52.381 0.00 0.00 37.60 4.44
4476 4619 2.100989 AGTGATGTACTCCCTCCGTTC 58.899 52.381 0.00 0.00 33.17 3.95
4477 4620 1.136500 GTGATGTACTCCCTCCGTTCC 59.864 57.143 0.00 0.00 0.00 3.62
4478 4621 0.384669 GATGTACTCCCTCCGTTCCG 59.615 60.000 0.00 0.00 0.00 4.30
4479 4622 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
4480 4623 0.033796 TGTACTCCCTCCGTTCCGAT 60.034 55.000 0.00 0.00 0.00 4.18
4481 4624 1.109609 GTACTCCCTCCGTTCCGATT 58.890 55.000 0.00 0.00 0.00 3.34
4482 4625 1.479730 GTACTCCCTCCGTTCCGATTT 59.520 52.381 0.00 0.00 0.00 2.17
4483 4626 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
4484 4627 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
4485 4628 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
4486 4629 1.753073 TCCCTCCGTTCCGATTTACTC 59.247 52.381 0.00 0.00 0.00 2.59
4488 4631 1.133790 CCTCCGTTCCGATTTACTCGT 59.866 52.381 0.00 0.00 46.18 4.18
4489 4632 2.448219 CTCCGTTCCGATTTACTCGTC 58.552 52.381 0.00 0.00 46.18 4.20
4490 4633 1.186030 CCGTTCCGATTTACTCGTCG 58.814 55.000 0.00 0.00 46.18 5.12
4491 4634 1.466360 CCGTTCCGATTTACTCGTCGT 60.466 52.381 0.00 0.00 46.18 4.34
4492 4635 1.576246 CGTTCCGATTTACTCGTCGTG 59.424 52.381 0.00 0.00 46.18 4.35
4493 4636 1.916000 GTTCCGATTTACTCGTCGTGG 59.084 52.381 0.00 0.00 46.18 4.94
4494 4637 1.167851 TCCGATTTACTCGTCGTGGT 58.832 50.000 0.00 0.00 46.18 4.16
4495 4638 1.541147 TCCGATTTACTCGTCGTGGTT 59.459 47.619 0.00 0.00 46.18 3.67
4496 4639 2.030007 TCCGATTTACTCGTCGTGGTTT 60.030 45.455 0.00 0.00 46.18 3.27
4497 4640 2.733026 CCGATTTACTCGTCGTGGTTTT 59.267 45.455 0.00 0.00 46.18 2.43
4498 4641 3.919804 CCGATTTACTCGTCGTGGTTTTA 59.080 43.478 0.00 0.00 46.18 1.52
4499 4642 4.030977 CCGATTTACTCGTCGTGGTTTTAG 59.969 45.833 0.00 0.00 46.18 1.85
4500 4643 4.618489 CGATTTACTCGTCGTGGTTTTAGT 59.382 41.667 0.00 0.00 42.56 2.24
4501 4644 5.117592 CGATTTACTCGTCGTGGTTTTAGTT 59.882 40.000 0.00 0.00 42.56 2.24
4502 4645 5.888412 TTTACTCGTCGTGGTTTTAGTTC 57.112 39.130 0.00 0.00 0.00 3.01
4503 4646 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
4504 4647 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
4505 4648 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
4506 4649 4.630940 ACTCGTCGTGGTTTTAGTTCAAAA 59.369 37.500 0.00 0.00 33.66 2.44
4517 4660 6.549061 GTTTTAGTTCAAAACCAAGACGAGT 58.451 36.000 0.00 0.00 46.91 4.18
4518 4661 7.687445 GTTTTAGTTCAAAACCAAGACGAGTA 58.313 34.615 0.00 0.00 46.91 2.59
4519 4662 7.846644 TTTAGTTCAAAACCAAGACGAGTAA 57.153 32.000 0.00 0.00 0.00 2.24
4520 4663 7.846644 TTAGTTCAAAACCAAGACGAGTAAA 57.153 32.000 0.00 0.00 0.00 2.01
4521 4664 6.937436 AGTTCAAAACCAAGACGAGTAAAT 57.063 33.333 0.00 0.00 0.00 1.40
4522 4665 6.956047 AGTTCAAAACCAAGACGAGTAAATC 58.044 36.000 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.503382 GGATCTCACGCCTCTCCCC 61.503 68.421 0.00 0.00 0.00 4.81
111 116 1.901948 ACCTTCGACACCGCAGAGA 60.902 57.895 0.00 0.00 30.64 3.10
131 136 1.467543 CGAGAAACGCTTCATCCTCGA 60.468 52.381 0.00 0.00 44.13 4.04
155 160 0.456221 TTCTCCGCCGAGATCTTGTC 59.544 55.000 9.19 0.00 44.68 3.18
227 233 0.528466 CTGCGCCACTATGTCGATGT 60.528 55.000 4.18 0.00 0.00 3.06
273 279 1.002990 TCTGCCGTCCACTCGTCTA 60.003 57.895 0.00 0.00 0.00 2.59
284 290 1.810606 CTCCACACTCAGTCTGCCGT 61.811 60.000 0.00 0.00 0.00 5.68
347 354 1.206831 GAAAAGGTTCACGCGCTCC 59.793 57.895 5.73 3.41 33.61 4.70
348 355 1.206831 GGAAAAGGTTCACGCGCTC 59.793 57.895 5.73 0.00 35.25 5.03
446 458 2.593436 CGTCGCCCTGGTTTTGGT 60.593 61.111 0.00 0.00 0.00 3.67
468 480 3.558931 TTAGATCATGCCAACGACCAT 57.441 42.857 0.00 0.00 0.00 3.55
469 481 3.342377 TTTAGATCATGCCAACGACCA 57.658 42.857 0.00 0.00 0.00 4.02
472 484 2.095213 GCGTTTTAGATCATGCCAACGA 59.905 45.455 15.49 0.00 39.43 3.85
475 487 1.202132 GCGCGTTTTAGATCATGCCAA 60.202 47.619 8.43 0.00 0.00 4.52
500 512 1.468520 ACACGCCGATTCATTTCAAGG 59.531 47.619 0.00 0.00 0.00 3.61
502 514 2.550180 TCAACACGCCGATTCATTTCAA 59.450 40.909 0.00 0.00 0.00 2.69
523 535 0.960364 ATTTGGGTCGACAATGCGCT 60.960 50.000 18.91 0.00 0.00 5.92
529 541 5.883673 CCCTCTTTTATATTTGGGTCGACAA 59.116 40.000 18.91 3.30 0.00 3.18
543 555 2.776659 GGCGTTCGCCCTCTTTTAT 58.223 52.632 23.38 0.00 44.99 1.40
633 654 2.889045 CACAGGAATATTGCAGGGATGG 59.111 50.000 9.81 0.00 0.00 3.51
634 655 3.824133 TCACAGGAATATTGCAGGGATG 58.176 45.455 9.81 0.97 0.00 3.51
635 656 4.210331 GTTCACAGGAATATTGCAGGGAT 58.790 43.478 9.81 0.00 35.05 3.85
636 657 3.620488 GTTCACAGGAATATTGCAGGGA 58.380 45.455 9.81 4.92 35.05 4.20
637 658 2.689983 GGTTCACAGGAATATTGCAGGG 59.310 50.000 9.81 2.28 35.05 4.45
638 659 3.355378 TGGTTCACAGGAATATTGCAGG 58.645 45.455 9.81 3.64 35.05 4.85
639 660 5.183713 TCTTTGGTTCACAGGAATATTGCAG 59.816 40.000 9.81 3.70 35.05 4.41
640 661 5.076182 TCTTTGGTTCACAGGAATATTGCA 58.924 37.500 9.81 0.00 35.05 4.08
641 662 5.393461 CCTCTTTGGTTCACAGGAATATTGC 60.393 44.000 0.00 0.00 35.05 3.56
642 663 5.393461 GCCTCTTTGGTTCACAGGAATATTG 60.393 44.000 0.00 0.00 38.35 1.90
643 664 4.706962 GCCTCTTTGGTTCACAGGAATATT 59.293 41.667 0.00 0.00 38.35 1.28
644 665 4.273318 GCCTCTTTGGTTCACAGGAATAT 58.727 43.478 0.00 0.00 38.35 1.28
645 666 3.561313 GGCCTCTTTGGTTCACAGGAATA 60.561 47.826 0.00 0.00 38.35 1.75
646 667 2.519013 GCCTCTTTGGTTCACAGGAAT 58.481 47.619 0.00 0.00 38.35 3.01
647 668 1.478654 GGCCTCTTTGGTTCACAGGAA 60.479 52.381 0.00 0.00 38.35 3.36
648 669 0.110486 GGCCTCTTTGGTTCACAGGA 59.890 55.000 0.00 0.00 38.35 3.86
649 670 0.111253 AGGCCTCTTTGGTTCACAGG 59.889 55.000 0.00 0.00 38.35 4.00
650 671 1.202806 TCAGGCCTCTTTGGTTCACAG 60.203 52.381 0.00 0.00 38.35 3.66
651 672 0.843309 TCAGGCCTCTTTGGTTCACA 59.157 50.000 0.00 0.00 38.35 3.58
652 673 1.072331 TCTCAGGCCTCTTTGGTTCAC 59.928 52.381 0.00 0.00 38.35 3.18
653 674 1.072331 GTCTCAGGCCTCTTTGGTTCA 59.928 52.381 0.00 0.00 38.35 3.18
654 675 1.611936 GGTCTCAGGCCTCTTTGGTTC 60.612 57.143 0.00 0.00 38.35 3.62
655 676 0.402121 GGTCTCAGGCCTCTTTGGTT 59.598 55.000 0.00 0.00 38.35 3.67
656 677 0.768221 TGGTCTCAGGCCTCTTTGGT 60.768 55.000 0.00 0.00 38.35 3.67
657 678 0.035630 CTGGTCTCAGGCCTCTTTGG 60.036 60.000 0.00 0.00 37.36 3.28
658 679 0.676151 GCTGGTCTCAGGCCTCTTTG 60.676 60.000 0.00 0.00 41.19 2.77
659 680 1.130054 TGCTGGTCTCAGGCCTCTTT 61.130 55.000 0.00 0.00 41.19 2.52
660 681 1.537397 TGCTGGTCTCAGGCCTCTT 60.537 57.895 0.00 0.00 41.19 2.85
661 682 1.988956 CTGCTGGTCTCAGGCCTCT 60.989 63.158 0.00 0.00 41.19 3.69
662 683 1.548357 TTCTGCTGGTCTCAGGCCTC 61.548 60.000 0.00 0.00 41.19 4.70
663 684 0.913451 ATTCTGCTGGTCTCAGGCCT 60.913 55.000 0.00 0.00 41.19 5.19
664 685 0.034670 AATTCTGCTGGTCTCAGGCC 60.035 55.000 0.00 0.00 41.19 5.19
665 686 1.377536 GAATTCTGCTGGTCTCAGGC 58.622 55.000 0.00 0.00 41.19 4.85
666 687 1.558756 AGGAATTCTGCTGGTCTCAGG 59.441 52.381 5.23 0.00 41.19 3.86
667 688 4.630111 GATAGGAATTCTGCTGGTCTCAG 58.370 47.826 5.23 0.00 43.64 3.35
668 689 3.068732 CGATAGGAATTCTGCTGGTCTCA 59.931 47.826 5.23 0.00 0.00 3.27
669 690 3.068873 ACGATAGGAATTCTGCTGGTCTC 59.931 47.826 5.23 0.00 43.77 3.36
670 691 3.034635 ACGATAGGAATTCTGCTGGTCT 58.965 45.455 5.23 0.00 43.77 3.85
671 692 3.385577 GACGATAGGAATTCTGCTGGTC 58.614 50.000 5.23 4.84 43.77 4.02
672 693 2.103263 GGACGATAGGAATTCTGCTGGT 59.897 50.000 5.23 0.00 43.77 4.00
673 694 2.103094 TGGACGATAGGAATTCTGCTGG 59.897 50.000 5.23 0.00 43.77 4.85
674 695 3.126831 GTGGACGATAGGAATTCTGCTG 58.873 50.000 5.23 0.00 43.77 4.41
675 696 2.103263 GGTGGACGATAGGAATTCTGCT 59.897 50.000 5.23 0.00 43.77 4.24
676 697 2.103263 AGGTGGACGATAGGAATTCTGC 59.897 50.000 5.23 0.00 43.77 4.26
677 698 3.384789 TGAGGTGGACGATAGGAATTCTG 59.615 47.826 5.23 0.00 43.77 3.02
678 699 3.385111 GTGAGGTGGACGATAGGAATTCT 59.615 47.826 5.23 0.00 43.77 2.40
679 700 3.492829 GGTGAGGTGGACGATAGGAATTC 60.493 52.174 0.00 0.00 43.77 2.17
680 701 2.434702 GGTGAGGTGGACGATAGGAATT 59.565 50.000 0.00 0.00 43.77 2.17
681 702 2.040178 GGTGAGGTGGACGATAGGAAT 58.960 52.381 0.00 0.00 43.77 3.01
682 703 1.006758 AGGTGAGGTGGACGATAGGAA 59.993 52.381 0.00 0.00 43.77 3.36
683 704 0.629596 AGGTGAGGTGGACGATAGGA 59.370 55.000 0.00 0.00 43.77 2.94
684 705 1.486211 AAGGTGAGGTGGACGATAGG 58.514 55.000 0.00 0.00 43.77 2.57
685 706 2.418746 CCAAAGGTGAGGTGGACGATAG 60.419 54.545 0.00 0.00 46.19 2.08
686 707 1.553248 CCAAAGGTGAGGTGGACGATA 59.447 52.381 0.00 0.00 34.05 2.92
687 708 0.324943 CCAAAGGTGAGGTGGACGAT 59.675 55.000 0.00 0.00 34.05 3.73
688 709 1.052124 ACCAAAGGTGAGGTGGACGA 61.052 55.000 0.00 0.00 36.60 4.20
689 710 0.179029 AACCAAAGGTGAGGTGGACG 60.179 55.000 0.00 0.00 38.37 4.79
690 711 1.318576 CAACCAAAGGTGAGGTGGAC 58.681 55.000 0.00 0.00 38.37 4.02
691 712 0.467290 GCAACCAAAGGTGAGGTGGA 60.467 55.000 0.00 0.00 38.37 4.02
692 713 0.468029 AGCAACCAAAGGTGAGGTGG 60.468 55.000 0.00 0.00 38.37 4.61
693 714 0.954452 GAGCAACCAAAGGTGAGGTG 59.046 55.000 0.00 0.00 38.37 4.00
694 715 0.178990 GGAGCAACCAAAGGTGAGGT 60.179 55.000 0.00 0.00 40.61 3.85
695 716 0.895559 GGGAGCAACCAAAGGTGAGG 60.896 60.000 2.58 0.00 41.20 3.86
696 717 0.895559 GGGGAGCAACCAAAGGTGAG 60.896 60.000 2.58 0.00 41.20 3.51
697 718 1.152830 GGGGAGCAACCAAAGGTGA 59.847 57.895 2.58 0.00 41.20 4.02
698 719 1.908299 GGGGGAGCAACCAAAGGTG 60.908 63.158 2.58 0.00 41.20 4.00
699 720 2.081585 GAGGGGGAGCAACCAAAGGT 62.082 60.000 2.58 0.00 41.20 3.50
700 721 1.304464 GAGGGGGAGCAACCAAAGG 60.304 63.158 2.58 0.00 41.20 3.11
701 722 0.113190 AAGAGGGGGAGCAACCAAAG 59.887 55.000 2.58 0.00 41.20 2.77
702 723 0.560688 AAAGAGGGGGAGCAACCAAA 59.439 50.000 2.58 0.00 41.20 3.28
703 724 0.560688 AAAAGAGGGGGAGCAACCAA 59.439 50.000 2.58 0.00 41.20 3.67
704 725 0.560688 AAAAAGAGGGGGAGCAACCA 59.439 50.000 2.58 0.00 41.20 3.67
705 726 1.203063 AGAAAAAGAGGGGGAGCAACC 60.203 52.381 0.00 0.00 38.08 3.77
706 727 2.163509 GAGAAAAAGAGGGGGAGCAAC 58.836 52.381 0.00 0.00 0.00 4.17
707 728 1.271379 CGAGAAAAAGAGGGGGAGCAA 60.271 52.381 0.00 0.00 0.00 3.91
708 729 0.324943 CGAGAAAAAGAGGGGGAGCA 59.675 55.000 0.00 0.00 0.00 4.26
709 730 0.393132 CCGAGAAAAAGAGGGGGAGC 60.393 60.000 0.00 0.00 0.00 4.70
710 731 0.984995 ACCGAGAAAAAGAGGGGGAG 59.015 55.000 0.00 0.00 0.00 4.30
711 732 0.981943 GACCGAGAAAAAGAGGGGGA 59.018 55.000 0.00 0.00 0.00 4.81
712 733 0.690762 TGACCGAGAAAAAGAGGGGG 59.309 55.000 0.00 0.00 0.00 5.40
713 734 1.809684 GTGACCGAGAAAAAGAGGGG 58.190 55.000 0.00 0.00 0.00 4.79
714 735 1.429463 CGTGACCGAGAAAAAGAGGG 58.571 55.000 0.00 0.00 35.63 4.30
715 736 0.790814 GCGTGACCGAGAAAAAGAGG 59.209 55.000 0.00 0.00 35.63 3.69
716 737 1.457303 CTGCGTGACCGAGAAAAAGAG 59.543 52.381 0.00 0.00 35.63 2.85
717 738 1.497991 CTGCGTGACCGAGAAAAAGA 58.502 50.000 0.00 0.00 35.63 2.52
718 739 0.110644 GCTGCGTGACCGAGAAAAAG 60.111 55.000 0.00 0.00 35.63 2.27
719 740 1.827315 CGCTGCGTGACCGAGAAAAA 61.827 55.000 14.93 0.00 35.63 1.94
720 741 2.307309 CGCTGCGTGACCGAGAAAA 61.307 57.895 14.93 0.00 35.63 2.29
721 742 2.733218 CGCTGCGTGACCGAGAAA 60.733 61.111 14.93 0.00 35.63 2.52
722 743 3.973516 ACGCTGCGTGACCGAGAA 61.974 61.111 28.41 0.00 39.18 2.87
735 756 9.498307 CGAGGAAAAATTAAAATATTACACGCT 57.502 29.630 0.00 0.00 0.00 5.07
752 773 2.359478 GGAGGCGGCGAGGAAAAA 60.359 61.111 12.98 0.00 0.00 1.94
770 791 2.011540 GAAGGATTCGAGGAAAGCGT 57.988 50.000 0.00 0.00 34.17 5.07
832 861 3.650950 CCTCCCTGGTGGTGGTGG 61.651 72.222 0.00 0.00 41.98 4.61
841 870 3.164269 CCGGATGGACCTCCCTGG 61.164 72.222 0.00 0.00 42.93 4.45
843 872 2.365635 CACCGGATGGACCTCCCT 60.366 66.667 9.46 0.00 39.21 4.20
862 891 4.856607 GTTCCTCCCTCGCGCTCG 62.857 72.222 5.56 0.00 0.00 5.03
865 894 2.892425 CATGTTCCTCCCTCGCGC 60.892 66.667 0.00 0.00 0.00 6.86
866 895 2.892425 GCATGTTCCTCCCTCGCG 60.892 66.667 0.00 0.00 0.00 5.87
867 896 2.892425 CGCATGTTCCTCCCTCGC 60.892 66.667 0.00 0.00 0.00 5.03
868 897 2.892425 GCGCATGTTCCTCCCTCG 60.892 66.667 0.30 0.00 0.00 4.63
869 898 2.514824 GGCGCATGTTCCTCCCTC 60.515 66.667 10.83 0.00 0.00 4.30
870 899 2.606587 AAGGCGCATGTTCCTCCCT 61.607 57.895 10.83 0.00 0.00 4.20
871 900 2.044946 AAGGCGCATGTTCCTCCC 60.045 61.111 10.83 0.00 0.00 4.30
872 901 0.749454 ATCAAGGCGCATGTTCCTCC 60.749 55.000 10.83 0.00 0.00 4.30
873 902 1.064654 GAATCAAGGCGCATGTTCCTC 59.935 52.381 10.83 0.63 0.00 3.71
874 903 1.098050 GAATCAAGGCGCATGTTCCT 58.902 50.000 10.83 0.00 0.00 3.36
877 906 1.474077 GGAAGAATCAAGGCGCATGTT 59.526 47.619 10.83 4.97 0.00 2.71
878 907 1.098050 GGAAGAATCAAGGCGCATGT 58.902 50.000 10.83 0.00 0.00 3.21
879 908 0.028505 CGGAAGAATCAAGGCGCATG 59.971 55.000 10.83 8.07 0.00 4.06
880 909 1.718757 GCGGAAGAATCAAGGCGCAT 61.719 55.000 10.83 0.00 34.16 4.73
882 911 2.041366 GAGCGGAAGAATCAAGGCGC 62.041 60.000 0.00 0.00 34.18 6.53
884 913 2.009888 CGAGCGGAAGAATCAAGGC 58.990 57.895 0.00 0.00 0.00 4.35
916 952 1.539124 AGAGGTGGGTGGGAACTCC 60.539 63.158 0.00 0.00 43.40 3.85
942 978 4.335584 GAGAGATCGGAGGCGCGG 62.336 72.222 8.83 0.00 0.00 6.46
943 979 2.794627 GATGAGAGATCGGAGGCGCG 62.795 65.000 0.00 0.00 0.00 6.86
944 980 1.080839 GATGAGAGATCGGAGGCGC 60.081 63.158 0.00 0.00 0.00 6.53
1074 1113 4.179599 GGGGAGAGAGGGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
1133 1172 0.319641 GTGAGGAAGCTCGAAACCGT 60.320 55.000 0.00 0.00 0.00 4.83
1225 1292 4.970662 ACTACTATGTCGCTAAACGGAA 57.029 40.909 0.00 0.00 43.89 4.30
1241 1308 5.047235 GTGAGTTGTGTTCATCCCTACTACT 60.047 44.000 0.00 0.00 33.15 2.57
1242 1309 5.169295 GTGAGTTGTGTTCATCCCTACTAC 58.831 45.833 0.00 0.00 0.00 2.73
1243 1310 4.082408 CGTGAGTTGTGTTCATCCCTACTA 60.082 45.833 0.00 0.00 0.00 1.82
1244 1311 3.306088 CGTGAGTTGTGTTCATCCCTACT 60.306 47.826 0.00 0.00 0.00 2.57
1323 1390 7.827701 TCTCGACTGTAACTCTATCAATTTGT 58.172 34.615 0.00 0.00 0.00 2.83
1349 1417 3.040147 TGTGTCGGAGGATCTTTTGTC 57.960 47.619 0.00 0.00 33.73 3.18
1350 1418 3.338249 CATGTGTCGGAGGATCTTTTGT 58.662 45.455 0.00 0.00 33.73 2.83
1351 1419 2.679837 CCATGTGTCGGAGGATCTTTTG 59.320 50.000 0.00 0.00 33.73 2.44
1352 1420 2.305927 ACCATGTGTCGGAGGATCTTTT 59.694 45.455 0.00 0.00 33.73 2.27
1353 1421 1.909302 ACCATGTGTCGGAGGATCTTT 59.091 47.619 0.00 0.00 33.73 2.52
1354 1422 1.208052 CACCATGTGTCGGAGGATCTT 59.792 52.381 0.00 0.00 33.73 2.40
1355 1423 0.826715 CACCATGTGTCGGAGGATCT 59.173 55.000 0.00 0.00 33.73 2.75
1356 1424 0.537188 ACACCATGTGTCGGAGGATC 59.463 55.000 0.00 0.00 43.92 3.36
1357 1425 0.984230 AACACCATGTGTCGGAGGAT 59.016 50.000 0.00 0.00 46.79 3.24
1358 1426 0.320374 GAACACCATGTGTCGGAGGA 59.680 55.000 0.00 0.00 46.79 3.71
1359 1427 0.673644 GGAACACCATGTGTCGGAGG 60.674 60.000 0.00 0.00 46.79 4.30
1360 1428 0.321671 AGGAACACCATGTGTCGGAG 59.678 55.000 0.00 0.00 46.79 4.63
1361 1429 1.548719 CTAGGAACACCATGTGTCGGA 59.451 52.381 0.00 0.00 46.79 4.55
1362 1430 1.548719 TCTAGGAACACCATGTGTCGG 59.451 52.381 0.00 0.00 46.79 4.79
1363 1431 3.190079 CATCTAGGAACACCATGTGTCG 58.810 50.000 0.00 0.00 46.79 4.35
1364 1432 2.939103 GCATCTAGGAACACCATGTGTC 59.061 50.000 0.00 0.00 46.79 3.67
1366 1434 2.989909 TGCATCTAGGAACACCATGTG 58.010 47.619 0.00 0.00 39.75 3.21
1400 1468 2.257371 GCACAGAGCGTACCACGA 59.743 61.111 2.35 0.00 46.05 4.35
1409 1477 1.783711 CGAATCATAGTCGCACAGAGC 59.216 52.381 0.00 0.00 40.87 4.09
1413 1481 3.503827 AAGACGAATCATAGTCGCACA 57.496 42.857 0.00 0.00 42.27 4.57
1414 1482 6.599637 GTATAAGACGAATCATAGTCGCAC 57.400 41.667 0.00 0.00 42.27 5.34
1429 1497 4.650754 ACTCCATCACCACGTATAAGAC 57.349 45.455 0.00 0.00 0.00 3.01
1434 1502 4.501571 GCTCATAACTCCATCACCACGTAT 60.502 45.833 0.00 0.00 0.00 3.06
1438 1506 3.118629 TCTGCTCATAACTCCATCACCAC 60.119 47.826 0.00 0.00 0.00 4.16
1441 1509 3.129871 GCTCTGCTCATAACTCCATCAC 58.870 50.000 0.00 0.00 0.00 3.06
1446 1514 1.134580 TGCTGCTCTGCTCATAACTCC 60.135 52.381 0.00 0.00 0.00 3.85
1452 1520 0.036448 ACTTGTGCTGCTCTGCTCAT 59.964 50.000 0.00 0.00 36.53 2.90
1457 1525 1.732809 CAGATGACTTGTGCTGCTCTG 59.267 52.381 0.00 0.00 0.00 3.35
1499 1572 0.520404 CAGCAGCACTGTTCCATCAC 59.480 55.000 0.00 0.00 41.86 3.06
1500 1573 2.936928 CAGCAGCACTGTTCCATCA 58.063 52.632 0.00 0.00 41.86 3.07
1519 1592 4.275936 CCAATACTAGCCGGGAAAGAATTG 59.724 45.833 2.18 1.75 0.00 2.32
1536 1609 0.808755 CCAAACCGTCAGGCCAATAC 59.191 55.000 5.01 0.00 42.76 1.89
1543 1616 0.250553 TTGGTAGCCAAACCGTCAGG 60.251 55.000 0.00 0.00 40.92 3.86
1546 1619 2.109425 ATCTTGGTAGCCAAACCGTC 57.891 50.000 2.07 0.00 43.44 4.79
1598 1671 1.067142 TCTCTCGACCCAAATTGACGG 60.067 52.381 0.00 0.00 0.00 4.79
1653 1734 5.738619 TGACTTTGCAGTAAGTATCCTGA 57.261 39.130 3.78 0.00 38.43 3.86
1656 1737 6.743575 ACATTGACTTTGCAGTAAGTATCC 57.256 37.500 3.78 0.00 38.43 2.59
1690 1771 7.147672 CCTGATAAAGGTAAAGATGCCCAAAAT 60.148 37.037 0.00 0.00 41.74 1.82
1694 1775 4.792068 CCTGATAAAGGTAAAGATGCCCA 58.208 43.478 0.00 0.00 41.74 5.36
1737 1819 8.609483 ACCTGGTGCATATCTGAAGAATTATAT 58.391 33.333 0.00 0.00 0.00 0.86
1742 1825 4.785346 ACCTGGTGCATATCTGAAGAAT 57.215 40.909 0.00 0.00 0.00 2.40
1758 1841 1.073923 ACTCCCTTTGTAGCAACCTGG 59.926 52.381 0.00 0.00 0.00 4.45
1788 1874 5.902613 TTTTGGGATGAGTTTCTGCATAG 57.097 39.130 0.00 0.00 0.00 2.23
1799 1885 4.096984 GTGTAGGAGCAATTTTGGGATGAG 59.903 45.833 0.00 0.00 0.00 2.90
1805 1891 3.763360 TGATGGTGTAGGAGCAATTTTGG 59.237 43.478 0.00 0.00 35.17 3.28
1820 1906 5.243981 CCTAATCTATTGAGGCTGATGGTG 58.756 45.833 0.00 0.00 0.00 4.17
1821 1907 4.288105 CCCTAATCTATTGAGGCTGATGGT 59.712 45.833 0.00 0.00 0.00 3.55
1822 1908 4.841422 CCCTAATCTATTGAGGCTGATGG 58.159 47.826 0.00 0.00 0.00 3.51
1833 1919 4.850680 TGAAAACACCGCCCTAATCTATT 58.149 39.130 0.00 0.00 0.00 1.73
1834 1920 4.080526 ACTGAAAACACCGCCCTAATCTAT 60.081 41.667 0.00 0.00 0.00 1.98
1860 1946 8.322906 TCACAATCCAAGTAACAGAATTACAG 57.677 34.615 0.10 0.00 0.00 2.74
1863 1949 8.918202 AGTTCACAATCCAAGTAACAGAATTA 57.082 30.769 0.00 0.00 0.00 1.40
1864 1950 7.823745 AGTTCACAATCCAAGTAACAGAATT 57.176 32.000 0.00 0.00 0.00 2.17
1865 1951 8.918202 TTAGTTCACAATCCAAGTAACAGAAT 57.082 30.769 0.00 0.00 0.00 2.40
1866 1952 7.444183 CCTTAGTTCACAATCCAAGTAACAGAA 59.556 37.037 0.00 0.00 0.00 3.02
1867 1953 6.934645 CCTTAGTTCACAATCCAAGTAACAGA 59.065 38.462 0.00 0.00 0.00 3.41
1868 1954 6.348540 GCCTTAGTTCACAATCCAAGTAACAG 60.349 42.308 0.00 0.00 0.00 3.16
1869 1955 5.472137 GCCTTAGTTCACAATCCAAGTAACA 59.528 40.000 0.00 0.00 0.00 2.41
1870 1956 5.472137 TGCCTTAGTTCACAATCCAAGTAAC 59.528 40.000 0.00 0.00 0.00 2.50
1905 1991 0.823460 GGGCCTTCTCAGAGAGACTG 59.177 60.000 0.84 0.00 46.97 3.51
1913 1999 2.338577 CCACTAATGGGCCTTCTCAG 57.661 55.000 4.53 0.00 43.04 3.35
2005 2096 7.315247 TGCAGTAATCCATACACACAATAAC 57.685 36.000 0.00 0.00 36.94 1.89
2014 2105 5.125356 CACAGGAATGCAGTAATCCATACA 58.875 41.667 11.71 0.00 36.94 2.29
2105 2196 5.128919 AGCAGTCATTTAATCCACAGATCC 58.871 41.667 0.00 0.00 0.00 3.36
2113 2204 6.798959 GCGATTTATGAGCAGTCATTTAATCC 59.201 38.462 12.67 6.84 40.84 3.01
2115 2206 6.262944 TGGCGATTTATGAGCAGTCATTTAAT 59.737 34.615 0.00 0.00 40.84 1.40
2116 2207 5.588246 TGGCGATTTATGAGCAGTCATTTAA 59.412 36.000 0.00 0.00 40.84 1.52
2117 2208 5.122519 TGGCGATTTATGAGCAGTCATTTA 58.877 37.500 0.00 0.00 40.84 1.40
2121 2212 2.689553 TGGCGATTTATGAGCAGTCA 57.310 45.000 0.00 0.00 37.02 3.41
2122 2213 2.286654 GCTTGGCGATTTATGAGCAGTC 60.287 50.000 0.00 0.00 0.00 3.51
2125 2216 1.024271 GGCTTGGCGATTTATGAGCA 58.976 50.000 0.00 0.00 32.01 4.26
2126 2217 1.312815 AGGCTTGGCGATTTATGAGC 58.687 50.000 0.00 0.00 0.00 4.26
2131 2222 2.685364 GCGTAGGCTTGGCGATTTA 58.315 52.632 0.00 0.00 35.83 1.40
2149 2240 8.458052 TCATTATTTGTGTTGCTAACCACATAG 58.542 33.333 0.00 0.00 0.00 2.23
2150 2241 8.240682 GTCATTATTTGTGTTGCTAACCACATA 58.759 33.333 0.00 0.00 0.00 2.29
2151 2242 7.090173 GTCATTATTTGTGTTGCTAACCACAT 58.910 34.615 0.00 0.00 0.00 3.21
2153 2244 5.567534 CGTCATTATTTGTGTTGCTAACCAC 59.432 40.000 0.00 0.00 0.00 4.16
2169 2260 3.728845 ACTATTTCCGCTGCGTCATTAT 58.271 40.909 21.59 9.05 0.00 1.28
2170 2261 3.173668 ACTATTTCCGCTGCGTCATTA 57.826 42.857 21.59 6.57 0.00 1.90
2173 2264 1.803334 AAACTATTTCCGCTGCGTCA 58.197 45.000 21.59 3.88 0.00 4.35
2174 2265 4.531659 ATTAAACTATTTCCGCTGCGTC 57.468 40.909 21.59 0.00 0.00 5.19
2175 2266 4.957759 AATTAAACTATTTCCGCTGCGT 57.042 36.364 21.59 4.60 0.00 5.24
2176 2267 4.027702 GCAAATTAAACTATTTCCGCTGCG 60.028 41.667 16.34 16.34 0.00 5.18
2177 2268 5.102313 AGCAAATTAAACTATTTCCGCTGC 58.898 37.500 0.00 0.00 30.25 5.25
2178 2269 8.856490 ATTAGCAAATTAAACTATTTCCGCTG 57.144 30.769 0.00 0.00 32.39 5.18
2179 2270 8.903820 AGATTAGCAAATTAAACTATTTCCGCT 58.096 29.630 0.00 0.00 33.74 5.52
2187 2278 9.845740 TGCAGGATAGATTAGCAAATTAAACTA 57.154 29.630 0.00 0.00 31.42 2.24
2188 2279 8.752005 TGCAGGATAGATTAGCAAATTAAACT 57.248 30.769 0.00 0.00 31.42 2.66
2189 2280 7.592903 GCTGCAGGATAGATTAGCAAATTAAAC 59.407 37.037 17.12 0.00 34.45 2.01
2190 2281 7.285172 TGCTGCAGGATAGATTAGCAAATTAAA 59.715 33.333 17.12 0.00 38.12 1.52
2191 2282 6.772233 TGCTGCAGGATAGATTAGCAAATTAA 59.228 34.615 17.12 0.00 38.12 1.40
2192 2283 6.298361 TGCTGCAGGATAGATTAGCAAATTA 58.702 36.000 17.12 0.00 38.12 1.40
2193 2284 5.135383 TGCTGCAGGATAGATTAGCAAATT 58.865 37.500 17.12 0.00 38.12 1.82
2194 2285 4.722220 TGCTGCAGGATAGATTAGCAAAT 58.278 39.130 17.12 0.00 38.12 2.32
2195 2286 4.155063 TGCTGCAGGATAGATTAGCAAA 57.845 40.909 17.12 0.00 38.12 3.68
2196 2287 3.843893 TGCTGCAGGATAGATTAGCAA 57.156 42.857 17.12 0.00 38.12 3.91
2197 2288 3.843893 TTGCTGCAGGATAGATTAGCA 57.156 42.857 17.12 0.12 39.17 3.49
2198 2289 4.681835 CATTGCTGCAGGATAGATTAGC 57.318 45.455 17.12 0.00 0.00 3.09
2237 2328 5.467735 ACACATTGTTCTACCTAAACGGAAC 59.532 40.000 0.00 0.00 38.64 3.62
2319 2410 8.918202 TGTAGACAGGTGAATAACTTGAAAAT 57.082 30.769 0.00 0.00 38.10 1.82
2343 2434 1.152984 TCCACACCAGCCACACTTG 60.153 57.895 0.00 0.00 0.00 3.16
2409 2500 2.341846 AACGCCTCCAGTGAGAAAAA 57.658 45.000 0.00 0.00 41.42 1.94
2450 2541 0.809385 CATGAAGAGGGCAAGCACAG 59.191 55.000 0.00 0.00 0.00 3.66
2457 2548 0.107993 CGAAGAGCATGAAGAGGGCA 60.108 55.000 0.00 0.00 0.00 5.36
2459 2550 2.393271 AACGAAGAGCATGAAGAGGG 57.607 50.000 0.00 0.00 0.00 4.30
2518 2609 2.094286 ACAGAGCACAGAGAAATCCTCG 60.094 50.000 0.00 0.00 46.49 4.63
2524 2615 6.712095 ACATGAATAAACAGAGCACAGAGAAA 59.288 34.615 0.00 0.00 0.00 2.52
2527 2618 6.492007 AACATGAATAAACAGAGCACAGAG 57.508 37.500 0.00 0.00 0.00 3.35
2528 2619 6.882610 AAACATGAATAAACAGAGCACAGA 57.117 33.333 0.00 0.00 0.00 3.41
2529 2620 8.292448 ACTTAAACATGAATAAACAGAGCACAG 58.708 33.333 0.00 0.00 0.00 3.66
2530 2621 8.165239 ACTTAAACATGAATAAACAGAGCACA 57.835 30.769 0.00 0.00 0.00 4.57
2597 2688 3.425193 CGGCGAAAAGGAAACAAAATCAG 59.575 43.478 0.00 0.00 0.00 2.90
2701 2792 7.353414 TGTAAATACAGATAAGAGAGCTGCT 57.647 36.000 0.00 0.00 46.01 4.24
2702 2793 8.600449 ATTGTAAATACAGATAAGAGAGCTGC 57.400 34.615 0.00 0.00 46.01 5.25
2990 3081 8.628882 ACAAGACAAAACTAATTAGCAACAAC 57.371 30.769 12.54 1.51 0.00 3.32
3122 3213 8.127327 GCATAAATGGTCATAATAGCAGCATAG 58.873 37.037 0.00 0.00 0.00 2.23
3264 3355 6.176183 CCAGAATTATACCCCTTGCTGATAG 58.824 44.000 0.00 0.00 0.00 2.08
3395 3486 6.156775 TCTCTCCATGAATATCAGTTGGTGAA 59.843 38.462 0.00 0.00 39.19 3.18
3875 3967 4.097741 CACCACCAATCTTGAAAGAACACA 59.902 41.667 0.00 0.00 38.77 3.72
3922 4014 1.408702 GTCTGAAGGCTGGCAAAACAA 59.591 47.619 3.38 0.00 0.00 2.83
3997 4090 8.781067 TTTGCATCAACGCTATGATATTTTAC 57.219 30.769 0.00 0.00 37.96 2.01
4056 4149 8.250332 GTCTAATCAATTTACCAAATTCTGCCA 58.750 33.333 0.00 0.00 38.97 4.92
4235 4328 7.093201 ACGGAAACTGAGGAACCATTAGTATTA 60.093 37.037 0.00 0.00 0.00 0.98
4236 4329 6.113411 CGGAAACTGAGGAACCATTAGTATT 58.887 40.000 0.00 0.00 0.00 1.89
4237 4330 5.189145 ACGGAAACTGAGGAACCATTAGTAT 59.811 40.000 0.00 0.00 0.00 2.12
4238 4331 4.529377 ACGGAAACTGAGGAACCATTAGTA 59.471 41.667 0.00 0.00 0.00 1.82
4239 4332 3.326880 ACGGAAACTGAGGAACCATTAGT 59.673 43.478 0.00 0.00 0.00 2.24
4308 4401 5.741011 ACAAAACCTCTGTTTCAGTCTACA 58.259 37.500 0.00 0.00 43.80 2.74
4343 4436 8.076178 GGTGAAATGTACATATTAGCAATGGAC 58.924 37.037 9.21 0.00 38.46 4.02
4352 4445 9.130661 CCCTCAATTGGTGAAATGTACATATTA 57.869 33.333 9.21 0.00 35.22 0.98
4353 4446 7.838696 TCCCTCAATTGGTGAAATGTACATATT 59.161 33.333 9.21 5.93 35.22 1.28
4354 4447 7.353525 TCCCTCAATTGGTGAAATGTACATAT 58.646 34.615 9.21 0.00 35.22 1.78
4355 4448 6.726379 TCCCTCAATTGGTGAAATGTACATA 58.274 36.000 9.21 0.00 35.22 2.29
4356 4449 5.579047 TCCCTCAATTGGTGAAATGTACAT 58.421 37.500 1.41 1.41 35.22 2.29
4357 4450 4.991776 TCCCTCAATTGGTGAAATGTACA 58.008 39.130 5.42 0.00 35.22 2.90
4358 4451 5.105756 CCTTCCCTCAATTGGTGAAATGTAC 60.106 44.000 5.42 0.00 35.22 2.90
4359 4452 5.016173 CCTTCCCTCAATTGGTGAAATGTA 58.984 41.667 5.42 0.00 35.22 2.29
4360 4453 3.834231 CCTTCCCTCAATTGGTGAAATGT 59.166 43.478 5.42 0.00 35.22 2.71
4361 4454 4.088634 TCCTTCCCTCAATTGGTGAAATG 58.911 43.478 5.42 1.74 35.22 2.32
4362 4455 4.402616 TCCTTCCCTCAATTGGTGAAAT 57.597 40.909 5.42 0.00 35.22 2.17
4363 4456 3.893753 TCCTTCCCTCAATTGGTGAAA 57.106 42.857 5.42 0.00 35.22 2.69
4364 4457 3.075882 ACATCCTTCCCTCAATTGGTGAA 59.924 43.478 5.42 5.47 35.22 3.18
4365 4458 2.649312 ACATCCTTCCCTCAATTGGTGA 59.351 45.455 5.42 0.00 34.17 4.02
4366 4459 3.091633 ACATCCTTCCCTCAATTGGTG 57.908 47.619 5.42 0.00 0.00 4.17
4367 4460 3.833559 AACATCCTTCCCTCAATTGGT 57.166 42.857 5.42 0.00 0.00 3.67
4368 4461 3.196254 CCAAACATCCTTCCCTCAATTGG 59.804 47.826 5.42 0.00 0.00 3.16
4369 4462 3.834231 ACCAAACATCCTTCCCTCAATTG 59.166 43.478 0.00 0.00 0.00 2.32
4370 4463 4.132122 ACCAAACATCCTTCCCTCAATT 57.868 40.909 0.00 0.00 0.00 2.32
4371 4464 3.833559 ACCAAACATCCTTCCCTCAAT 57.166 42.857 0.00 0.00 0.00 2.57
4372 4465 3.140144 AGAACCAAACATCCTTCCCTCAA 59.860 43.478 0.00 0.00 0.00 3.02
4373 4466 2.716424 AGAACCAAACATCCTTCCCTCA 59.284 45.455 0.00 0.00 0.00 3.86
4374 4467 3.084786 CAGAACCAAACATCCTTCCCTC 58.915 50.000 0.00 0.00 0.00 4.30
4375 4468 2.819348 GCAGAACCAAACATCCTTCCCT 60.819 50.000 0.00 0.00 0.00 4.20
4376 4469 1.546029 GCAGAACCAAACATCCTTCCC 59.454 52.381 0.00 0.00 0.00 3.97
4377 4470 2.238521 TGCAGAACCAAACATCCTTCC 58.761 47.619 0.00 0.00 0.00 3.46
4378 4471 4.525912 AATGCAGAACCAAACATCCTTC 57.474 40.909 0.00 0.00 0.00 3.46
4379 4472 4.590222 AGAAATGCAGAACCAAACATCCTT 59.410 37.500 0.00 0.00 0.00 3.36
4380 4473 4.021719 CAGAAATGCAGAACCAAACATCCT 60.022 41.667 0.00 0.00 0.00 3.24
4381 4474 4.240096 CAGAAATGCAGAACCAAACATCC 58.760 43.478 0.00 0.00 0.00 3.51
4382 4475 3.676646 GCAGAAATGCAGAACCAAACATC 59.323 43.478 0.00 0.00 34.41 3.06
4383 4476 3.322828 AGCAGAAATGCAGAACCAAACAT 59.677 39.130 2.73 0.00 37.25 2.71
4384 4477 2.694628 AGCAGAAATGCAGAACCAAACA 59.305 40.909 2.73 0.00 37.25 2.83
4385 4478 3.054878 CAGCAGAAATGCAGAACCAAAC 58.945 45.455 2.73 0.00 37.25 2.93
4386 4479 2.546373 GCAGCAGAAATGCAGAACCAAA 60.546 45.455 2.73 0.00 43.31 3.28
4387 4480 1.000060 GCAGCAGAAATGCAGAACCAA 60.000 47.619 2.73 0.00 43.31 3.67
4388 4481 0.599558 GCAGCAGAAATGCAGAACCA 59.400 50.000 2.73 0.00 43.31 3.67
4389 4482 0.108945 GGCAGCAGAAATGCAGAACC 60.109 55.000 2.73 0.00 45.68 3.62
4390 4483 0.108945 GGGCAGCAGAAATGCAGAAC 60.109 55.000 2.73 0.00 45.68 3.01
4391 4484 0.540133 TGGGCAGCAGAAATGCAGAA 60.540 50.000 2.73 0.00 45.68 3.02
4392 4485 0.540133 TTGGGCAGCAGAAATGCAGA 60.540 50.000 2.73 0.00 45.68 4.26
4393 4486 0.535335 ATTGGGCAGCAGAAATGCAG 59.465 50.000 2.73 0.00 45.68 4.41
4394 4487 1.752498 CTATTGGGCAGCAGAAATGCA 59.248 47.619 2.73 0.00 45.68 3.96
4395 4488 1.537562 GCTATTGGGCAGCAGAAATGC 60.538 52.381 0.00 0.00 43.09 3.56
4396 4489 1.068127 GGCTATTGGGCAGCAGAAATG 59.932 52.381 0.00 0.00 40.95 2.32
4397 4490 1.342275 TGGCTATTGGGCAGCAGAAAT 60.342 47.619 0.00 0.00 45.79 2.17
4398 4491 0.039472 TGGCTATTGGGCAGCAGAAA 59.961 50.000 0.00 0.00 45.79 2.52
4399 4492 1.690616 TGGCTATTGGGCAGCAGAA 59.309 52.632 0.00 0.00 45.79 3.02
4400 4493 3.414022 TGGCTATTGGGCAGCAGA 58.586 55.556 0.00 0.00 45.79 4.26
4478 4621 6.144402 TGAACTAAAACCACGACGAGTAAATC 59.856 38.462 0.00 0.00 0.00 2.17
4479 4622 5.984926 TGAACTAAAACCACGACGAGTAAAT 59.015 36.000 0.00 0.00 0.00 1.40
4480 4623 5.347342 TGAACTAAAACCACGACGAGTAAA 58.653 37.500 0.00 0.00 0.00 2.01
4481 4624 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
4482 4625 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
4483 4626 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
4484 4627 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
4494 4637 6.746745 ACTCGTCTTGGTTTTGAACTAAAA 57.253 33.333 0.00 0.00 35.96 1.52
4495 4638 7.846644 TTACTCGTCTTGGTTTTGAACTAAA 57.153 32.000 0.00 0.00 31.22 1.85
4496 4639 7.846644 TTTACTCGTCTTGGTTTTGAACTAA 57.153 32.000 0.00 0.00 0.00 2.24
4497 4640 7.095940 CGATTTACTCGTCTTGGTTTTGAACTA 60.096 37.037 0.00 0.00 42.56 2.24
4498 4641 6.292703 CGATTTACTCGTCTTGGTTTTGAACT 60.293 38.462 0.00 0.00 42.56 3.01
4499 4642 5.844396 CGATTTACTCGTCTTGGTTTTGAAC 59.156 40.000 0.00 0.00 42.56 3.18
4500 4643 5.049954 CCGATTTACTCGTCTTGGTTTTGAA 60.050 40.000 0.00 0.00 46.18 2.69
4501 4644 4.449743 CCGATTTACTCGTCTTGGTTTTGA 59.550 41.667 0.00 0.00 46.18 2.69
4502 4645 4.449743 TCCGATTTACTCGTCTTGGTTTTG 59.550 41.667 0.00 0.00 46.18 2.44
4503 4646 4.634199 TCCGATTTACTCGTCTTGGTTTT 58.366 39.130 0.00 0.00 46.18 2.43
4504 4647 4.261578 TCCGATTTACTCGTCTTGGTTT 57.738 40.909 0.00 0.00 46.18 3.27
4505 4648 3.947910 TCCGATTTACTCGTCTTGGTT 57.052 42.857 0.00 0.00 46.18 3.67
4506 4649 3.582780 GTTCCGATTTACTCGTCTTGGT 58.417 45.455 0.00 0.00 46.18 3.67
4507 4650 2.597305 CGTTCCGATTTACTCGTCTTGG 59.403 50.000 0.00 0.00 46.18 3.61
4508 4651 2.597305 CCGTTCCGATTTACTCGTCTTG 59.403 50.000 0.00 0.00 46.18 3.02
4509 4652 2.489329 TCCGTTCCGATTTACTCGTCTT 59.511 45.455 0.00 0.00 46.18 3.01
4510 4653 2.086869 TCCGTTCCGATTTACTCGTCT 58.913 47.619 0.00 0.00 46.18 4.18
4511 4654 2.448219 CTCCGTTCCGATTTACTCGTC 58.552 52.381 0.00 0.00 46.18 4.20
4512 4655 1.133790 CCTCCGTTCCGATTTACTCGT 59.866 52.381 0.00 0.00 46.18 4.18
4514 4657 1.753073 TCCCTCCGTTCCGATTTACTC 59.247 52.381 0.00 0.00 0.00 2.59
4515 4658 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
4516 4659 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
4517 4660 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
4518 4661 2.680066 ACTCCCTCCGTTCCGATTT 58.320 52.632 0.00 0.00 0.00 2.17
4519 4662 4.455366 ACTCCCTCCGTTCCGATT 57.545 55.556 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.