Multiple sequence alignment - TraesCS2B01G585000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G585000 chr2B 100.000 2469 0 0 1 2469 771969182 771966714 0.000000e+00 4560.0
1 TraesCS2B01G585000 chr2B 95.513 624 28 0 1845 2468 775917746 775917123 0.000000e+00 998.0
2 TraesCS2B01G585000 chr2B 88.345 429 30 14 925 1351 771413921 771414331 4.740000e-137 497.0
3 TraesCS2B01G585000 chr2B 97.917 48 1 0 856 903 771413816 771413863 1.570000e-12 84.2
4 TraesCS2B01G585000 chr4A 97.884 709 7 2 1 709 689249401 689250101 0.000000e+00 1219.0
5 TraesCS2B01G585000 chr4A 83.582 67 11 0 1762 1828 566095785 566095851 2.050000e-06 63.9
6 TraesCS2B01G585000 chr2D 87.717 692 24 18 925 1612 628984847 628984213 0.000000e+00 750.0
7 TraesCS2B01G585000 chr2D 86.519 675 41 27 856 1505 628270039 628270688 0.000000e+00 697.0
8 TraesCS2B01G585000 chr2D 87.640 534 23 17 925 1454 628574595 628574101 4.580000e-162 580.0
9 TraesCS2B01G585000 chr2D 88.085 235 18 2 1613 1847 628984156 628983932 1.130000e-68 270.0
10 TraesCS2B01G585000 chr2D 80.808 198 14 13 728 924 628985079 628984905 1.540000e-27 134.0
11 TraesCS2B01G585000 chr2D 94.737 57 3 0 925 981 628582987 628582931 3.380000e-14 89.8
12 TraesCS2B01G585000 chr2D 94.737 38 2 0 1569 1606 628270763 628270800 2.650000e-05 60.2
13 TraesCS2B01G585000 chr2A 80.635 945 85 52 729 1612 758588238 758589145 2.070000e-180 641.0
14 TraesCS2B01G585000 chr2A 96.269 134 5 0 579 712 96594715 96594848 1.150000e-53 220.0
15 TraesCS2B01G585000 chr2A 91.852 135 8 2 576 709 256211269 256211137 4.190000e-43 185.0
16 TraesCS2B01G585000 chr5A 88.145 523 44 9 1 509 173523446 173523964 7.550000e-170 606.0
17 TraesCS2B01G585000 chr3A 96.970 132 4 0 579 710 436639043 436638912 3.200000e-54 222.0
18 TraesCS2B01G585000 chr3A 94.737 133 7 0 579 711 497925193 497925061 8.950000e-50 207.0
19 TraesCS2B01G585000 chr5B 96.212 132 5 0 579 710 253151641 253151510 1.490000e-52 217.0
20 TraesCS2B01G585000 chr5B 95.420 131 6 0 579 709 166548419 166548549 2.490000e-50 209.0
21 TraesCS2B01G585000 chr3D 85.646 209 24 4 1640 1846 137127558 137127762 5.350000e-52 215.0
22 TraesCS2B01G585000 chr7D 85.922 206 21 6 1644 1846 482233812 482234012 1.920000e-51 213.0
23 TraesCS2B01G585000 chrUn 91.304 138 9 3 573 709 65685213 65685348 4.190000e-43 185.0
24 TraesCS2B01G585000 chr6B 91.241 137 9 2 576 711 62643174 62643040 1.510000e-42 183.0
25 TraesCS2B01G585000 chr5D 86.014 143 9 6 709 843 15558720 15558581 2.560000e-30 143.0
26 TraesCS2B01G585000 chr5D 95.588 68 3 0 925 992 15558380 15558313 2.600000e-20 110.0
27 TraesCS2B01G585000 chr5D 94.030 67 4 0 925 991 15558290 15558224 4.340000e-18 102.0
28 TraesCS2B01G585000 chr5D 89.706 68 6 1 857 923 15558506 15558439 4.370000e-13 86.1
29 TraesCS2B01G585000 chr5D 97.222 36 1 0 1571 1606 15553717 15553682 7.370000e-06 62.1
30 TraesCS2B01G585000 chr7B 88.333 60 7 0 1762 1821 503466536 503466477 3.410000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G585000 chr2B 771966714 771969182 2468 True 4560.000000 4560 100.000000 1 2469 1 chr2B.!!$R1 2468
1 TraesCS2B01G585000 chr2B 775917123 775917746 623 True 998.000000 998 95.513000 1845 2468 1 chr2B.!!$R2 623
2 TraesCS2B01G585000 chr2B 771413816 771414331 515 False 290.600000 497 93.131000 856 1351 2 chr2B.!!$F1 495
3 TraesCS2B01G585000 chr4A 689249401 689250101 700 False 1219.000000 1219 97.884000 1 709 1 chr4A.!!$F2 708
4 TraesCS2B01G585000 chr2D 628983932 628985079 1147 True 384.666667 750 85.536667 728 1847 3 chr2D.!!$R3 1119
5 TraesCS2B01G585000 chr2D 628270039 628270800 761 False 378.600000 697 90.628000 856 1606 2 chr2D.!!$F1 750
6 TraesCS2B01G585000 chr2A 758588238 758589145 907 False 641.000000 641 80.635000 729 1612 1 chr2A.!!$F2 883
7 TraesCS2B01G585000 chr5A 173523446 173523964 518 False 606.000000 606 88.145000 1 509 1 chr5A.!!$F1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 245 0.03563 GCTCCATGACACTGAGCCTT 60.036 55.0 14.32 0.0 44.45 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1798 2216 0.383949 TTCACTTTTGAAGGGCGTGC 59.616 50.0 0.0 0.0 36.79 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 163 3.648982 CCGCAGCAACTCGCACAA 61.649 61.111 0.00 0.00 46.13 3.33
163 164 2.425773 CGCAGCAACTCGCACAAC 60.426 61.111 0.00 0.00 46.13 3.32
164 165 2.425773 GCAGCAACTCGCACAACG 60.426 61.111 0.00 0.00 46.13 4.10
165 166 3.014036 CAGCAACTCGCACAACGT 58.986 55.556 0.00 0.00 46.13 3.99
166 167 1.827315 GCAGCAACTCGCACAACGTA 61.827 55.000 0.00 0.00 46.13 3.57
167 168 0.579630 CAGCAACTCGCACAACGTAA 59.420 50.000 0.00 0.00 46.13 3.18
168 169 0.580104 AGCAACTCGCACAACGTAAC 59.420 50.000 0.00 0.00 46.13 2.50
169 170 0.716926 GCAACTCGCACAACGTAACG 60.717 55.000 0.00 0.00 44.19 3.18
170 171 0.573521 CAACTCGCACAACGTAACGT 59.426 50.000 0.00 0.00 43.97 3.99
171 172 0.848305 AACTCGCACAACGTAACGTC 59.152 50.000 0.00 0.00 39.99 4.34
172 173 0.936297 ACTCGCACAACGTAACGTCC 60.936 55.000 0.00 0.00 39.99 4.79
173 174 0.662374 CTCGCACAACGTAACGTCCT 60.662 55.000 0.00 0.00 39.99 3.85
174 175 0.661187 TCGCACAACGTAACGTCCTC 60.661 55.000 0.00 0.00 39.99 3.71
175 176 1.611592 CGCACAACGTAACGTCCTCC 61.612 60.000 0.00 0.00 39.99 4.30
176 177 0.319297 GCACAACGTAACGTCCTCCT 60.319 55.000 0.00 0.00 39.99 3.69
177 178 1.694639 CACAACGTAACGTCCTCCTC 58.305 55.000 0.00 0.00 39.99 3.71
178 179 0.239347 ACAACGTAACGTCCTCCTCG 59.761 55.000 0.00 0.00 39.99 4.63
179 180 0.518636 CAACGTAACGTCCTCCTCGA 59.481 55.000 0.00 0.00 39.99 4.04
180 181 0.519077 AACGTAACGTCCTCCTCGAC 59.481 55.000 0.00 0.00 39.99 4.20
181 182 0.603707 ACGTAACGTCCTCCTCGACA 60.604 55.000 0.00 0.00 33.69 4.35
182 183 0.518636 CGTAACGTCCTCCTCGACAA 59.481 55.000 0.00 0.00 32.74 3.18
183 184 1.465354 CGTAACGTCCTCCTCGACAAG 60.465 57.143 0.00 0.00 32.74 3.16
184 185 0.524862 TAACGTCCTCCTCGACAAGC 59.475 55.000 0.00 0.00 32.74 4.01
185 186 2.202492 CGTCCTCCTCGACAAGCG 60.202 66.667 0.00 0.00 42.69 4.68
186 187 2.507324 GTCCTCCTCGACAAGCGC 60.507 66.667 0.00 0.00 40.61 5.92
187 188 2.989253 TCCTCCTCGACAAGCGCA 60.989 61.111 11.47 0.00 40.61 6.09
188 189 2.048222 CCTCCTCGACAAGCGCAA 60.048 61.111 11.47 0.00 40.61 4.85
189 190 2.097038 CCTCCTCGACAAGCGCAAG 61.097 63.158 11.47 3.32 40.61 4.01
190 191 1.373497 CTCCTCGACAAGCGCAAGT 60.373 57.895 11.47 7.45 40.61 3.16
191 192 1.347817 CTCCTCGACAAGCGCAAGTC 61.348 60.000 18.74 18.74 40.61 3.01
195 196 4.245054 GACAAGCGCAAGTCGAGA 57.755 55.556 11.47 0.00 41.67 4.04
196 197 2.517598 GACAAGCGCAAGTCGAGAA 58.482 52.632 11.47 0.00 41.67 2.87
197 198 0.161870 GACAAGCGCAAGTCGAGAAC 59.838 55.000 11.47 0.00 41.67 3.01
198 199 1.128611 CAAGCGCAAGTCGAGAACG 59.871 57.895 11.47 0.00 41.67 3.95
199 200 1.299926 AAGCGCAAGTCGAGAACGT 60.300 52.632 11.47 0.00 41.67 3.99
200 201 1.548973 AAGCGCAAGTCGAGAACGTG 61.549 55.000 11.47 0.00 41.67 4.49
201 202 3.000080 GCGCAAGTCGAGAACGTGG 62.000 63.158 0.30 0.00 41.67 4.94
202 203 2.853914 GCAAGTCGAGAACGTGGC 59.146 61.111 0.00 0.00 37.77 5.01
203 204 2.668280 GCAAGTCGAGAACGTGGCC 61.668 63.158 0.00 0.00 37.77 5.36
204 205 2.049433 AAGTCGAGAACGTGGCCG 60.049 61.111 0.00 0.00 40.69 6.13
205 206 2.558286 AAGTCGAGAACGTGGCCGA 61.558 57.895 0.00 0.00 40.69 5.54
206 207 1.874345 AAGTCGAGAACGTGGCCGAT 61.874 55.000 0.00 0.00 40.69 4.18
207 208 2.158959 GTCGAGAACGTGGCCGATG 61.159 63.158 0.00 0.00 40.69 3.84
208 209 2.180769 CGAGAACGTGGCCGATGA 59.819 61.111 0.00 0.00 37.88 2.92
209 210 1.445410 CGAGAACGTGGCCGATGAA 60.445 57.895 0.00 0.00 37.88 2.57
210 211 1.413767 CGAGAACGTGGCCGATGAAG 61.414 60.000 0.00 0.00 37.88 3.02
211 212 0.389948 GAGAACGTGGCCGATGAAGT 60.390 55.000 0.00 0.00 37.88 3.01
212 213 0.670546 AGAACGTGGCCGATGAAGTG 60.671 55.000 0.00 0.00 37.88 3.16
213 214 1.635663 GAACGTGGCCGATGAAGTGG 61.636 60.000 0.00 0.00 37.88 4.00
214 215 2.107041 AACGTGGCCGATGAAGTGGA 62.107 55.000 0.00 0.00 37.88 4.02
215 216 2.100631 CGTGGCCGATGAAGTGGAC 61.101 63.158 0.00 0.00 35.63 4.02
216 217 1.745489 GTGGCCGATGAAGTGGACC 60.745 63.158 0.00 0.00 29.51 4.46
217 218 1.918293 TGGCCGATGAAGTGGACCT 60.918 57.895 0.00 0.00 29.51 3.85
218 219 1.450312 GGCCGATGAAGTGGACCTG 60.450 63.158 0.00 0.00 0.00 4.00
219 220 1.450312 GCCGATGAAGTGGACCTGG 60.450 63.158 0.00 0.00 0.00 4.45
220 221 1.899437 GCCGATGAAGTGGACCTGGA 61.899 60.000 0.00 0.00 0.00 3.86
221 222 0.108138 CCGATGAAGTGGACCTGGAC 60.108 60.000 0.00 0.00 0.00 4.02
222 223 0.108138 CGATGAAGTGGACCTGGACC 60.108 60.000 8.34 8.34 0.00 4.46
223 224 1.280457 GATGAAGTGGACCTGGACCT 58.720 55.000 16.02 0.00 0.00 3.85
224 225 1.208293 GATGAAGTGGACCTGGACCTC 59.792 57.143 16.02 12.36 0.00 3.85
225 226 1.185618 TGAAGTGGACCTGGACCTCG 61.186 60.000 16.02 0.00 0.00 4.63
226 227 2.508586 GAAGTGGACCTGGACCTCGC 62.509 65.000 16.02 7.00 0.00 5.03
227 228 2.997897 GTGGACCTGGACCTCGCT 60.998 66.667 16.02 0.00 0.00 4.93
228 229 2.680352 TGGACCTGGACCTCGCTC 60.680 66.667 16.02 0.00 0.00 5.03
229 230 3.462678 GGACCTGGACCTCGCTCC 61.463 72.222 8.00 0.00 0.00 4.70
230 231 2.680352 GACCTGGACCTCGCTCCA 60.680 66.667 0.00 0.00 38.05 3.86
231 232 2.039624 ACCTGGACCTCGCTCCAT 59.960 61.111 0.00 0.00 39.72 3.41
232 233 2.303549 GACCTGGACCTCGCTCCATG 62.304 65.000 0.00 0.00 39.72 3.66
233 234 2.060383 CCTGGACCTCGCTCCATGA 61.060 63.158 0.00 0.00 39.72 3.07
234 235 1.142748 CTGGACCTCGCTCCATGAC 59.857 63.158 0.00 0.00 39.72 3.06
235 236 1.607801 CTGGACCTCGCTCCATGACA 61.608 60.000 0.00 0.00 39.72 3.58
236 237 1.153549 GGACCTCGCTCCATGACAC 60.154 63.158 0.00 0.00 0.00 3.67
237 238 1.608717 GGACCTCGCTCCATGACACT 61.609 60.000 0.00 0.00 0.00 3.55
238 239 0.459237 GACCTCGCTCCATGACACTG 60.459 60.000 0.00 0.00 0.00 3.66
239 240 0.900182 ACCTCGCTCCATGACACTGA 60.900 55.000 0.00 0.00 0.00 3.41
240 241 0.179116 CCTCGCTCCATGACACTGAG 60.179 60.000 0.00 0.00 0.00 3.35
241 242 0.805322 CTCGCTCCATGACACTGAGC 60.805 60.000 14.99 14.99 46.21 4.26
242 243 1.812922 CGCTCCATGACACTGAGCC 60.813 63.158 17.78 5.45 46.82 4.70
243 244 1.601171 GCTCCATGACACTGAGCCT 59.399 57.895 14.32 0.00 44.45 4.58
244 245 0.035630 GCTCCATGACACTGAGCCTT 60.036 55.000 14.32 0.00 44.45 4.35
245 246 1.612726 GCTCCATGACACTGAGCCTTT 60.613 52.381 14.32 0.00 44.45 3.11
246 247 2.787994 CTCCATGACACTGAGCCTTTT 58.212 47.619 0.00 0.00 0.00 2.27
247 248 2.746362 CTCCATGACACTGAGCCTTTTC 59.254 50.000 0.00 0.00 0.00 2.29
248 249 2.106338 TCCATGACACTGAGCCTTTTCA 59.894 45.455 0.00 0.00 0.00 2.69
249 250 3.087031 CCATGACACTGAGCCTTTTCAT 58.913 45.455 0.00 0.00 0.00 2.57
250 251 3.128242 CCATGACACTGAGCCTTTTCATC 59.872 47.826 0.00 0.00 0.00 2.92
251 252 2.416747 TGACACTGAGCCTTTTCATCG 58.583 47.619 0.00 0.00 0.00 3.84
252 253 1.734465 GACACTGAGCCTTTTCATCGG 59.266 52.381 0.00 0.00 0.00 4.18
253 254 0.449388 CACTGAGCCTTTTCATCGGC 59.551 55.000 0.00 0.00 46.65 5.54
259 260 0.665298 GCCTTTTCATCGGCAGATCC 59.335 55.000 0.00 0.00 45.59 3.36
286 287 2.511600 CGGAAGGTCGCCCATGTC 60.512 66.667 0.00 0.00 0.00 3.06
287 288 2.124695 GGAAGGTCGCCCATGTCC 60.125 66.667 0.00 0.00 0.00 4.02
288 289 2.668632 GAAGGTCGCCCATGTCCA 59.331 61.111 0.00 0.00 0.00 4.02
289 290 1.450312 GAAGGTCGCCCATGTCCAG 60.450 63.158 0.00 0.00 0.00 3.86
290 291 2.876368 GAAGGTCGCCCATGTCCAGG 62.876 65.000 0.00 0.00 0.00 4.45
291 292 3.399181 GGTCGCCCATGTCCAGGA 61.399 66.667 0.00 0.00 0.00 3.86
292 293 2.746375 GGTCGCCCATGTCCAGGAT 61.746 63.158 0.00 0.00 0.00 3.24
293 294 1.524621 GTCGCCCATGTCCAGGATG 60.525 63.158 0.00 0.00 0.00 3.51
294 295 1.688884 TCGCCCATGTCCAGGATGA 60.689 57.895 0.00 0.00 39.69 2.92
295 296 1.524621 CGCCCATGTCCAGGATGAC 60.525 63.158 0.00 0.00 39.69 3.06
296 297 1.152881 GCCCATGTCCAGGATGACC 60.153 63.158 0.00 0.00 39.69 4.02
297 298 1.146930 CCCATGTCCAGGATGACCG 59.853 63.158 0.00 0.00 39.69 4.79
298 299 1.524621 CCATGTCCAGGATGACCGC 60.525 63.158 0.00 0.00 39.69 5.68
299 300 1.524002 CATGTCCAGGATGACCGCT 59.476 57.895 0.00 0.00 39.69 5.52
300 301 0.752658 CATGTCCAGGATGACCGCTA 59.247 55.000 0.00 0.00 39.69 4.26
301 302 0.753262 ATGTCCAGGATGACCGCTAC 59.247 55.000 0.00 0.00 39.69 3.58
302 303 1.327690 TGTCCAGGATGACCGCTACC 61.328 60.000 0.00 0.00 39.69 3.18
303 304 1.043673 GTCCAGGATGACCGCTACCT 61.044 60.000 0.00 0.00 39.69 3.08
304 305 0.755698 TCCAGGATGACCGCTACCTC 60.756 60.000 0.00 0.00 39.69 3.85
305 306 1.360551 CAGGATGACCGCTACCTCG 59.639 63.158 0.00 0.00 39.69 4.63
306 307 2.027751 GGATGACCGCTACCTCGC 59.972 66.667 0.00 0.00 0.00 5.03
307 308 2.027751 GATGACCGCTACCTCGCC 59.972 66.667 0.00 0.00 0.00 5.54
308 309 3.825833 GATGACCGCTACCTCGCCG 62.826 68.421 0.00 0.00 0.00 6.46
310 311 3.204827 GACCGCTACCTCGCCGTA 61.205 66.667 0.00 0.00 0.00 4.02
311 312 2.517875 ACCGCTACCTCGCCGTAT 60.518 61.111 0.00 0.00 0.00 3.06
312 313 2.254651 CCGCTACCTCGCCGTATC 59.745 66.667 0.00 0.00 0.00 2.24
313 314 2.259439 CCGCTACCTCGCCGTATCT 61.259 63.158 0.00 0.00 0.00 1.98
314 315 1.653115 CGCTACCTCGCCGTATCTT 59.347 57.895 0.00 0.00 0.00 2.40
315 316 0.660595 CGCTACCTCGCCGTATCTTG 60.661 60.000 0.00 0.00 0.00 3.02
316 317 0.318784 GCTACCTCGCCGTATCTTGG 60.319 60.000 0.00 0.00 0.00 3.61
317 318 1.030457 CTACCTCGCCGTATCTTGGT 58.970 55.000 0.00 0.00 0.00 3.67
318 319 0.742505 TACCTCGCCGTATCTTGGTG 59.257 55.000 0.00 0.00 38.37 4.17
319 320 1.883084 CCTCGCCGTATCTTGGTGC 60.883 63.158 0.00 0.00 36.92 5.01
320 321 2.202690 TCGCCGTATCTTGGTGCG 60.203 61.111 0.00 0.00 46.09 5.34
322 323 4.438346 GCCGTATCTTGGTGCGAT 57.562 55.556 0.00 0.00 0.00 4.58
323 324 1.934463 GCCGTATCTTGGTGCGATG 59.066 57.895 0.00 0.00 0.00 3.84
324 325 1.498865 GCCGTATCTTGGTGCGATGG 61.499 60.000 0.00 0.00 0.00 3.51
325 326 1.498865 CCGTATCTTGGTGCGATGGC 61.499 60.000 0.00 0.00 40.52 4.40
326 327 1.821241 CGTATCTTGGTGCGATGGCG 61.821 60.000 0.00 0.00 44.10 5.69
327 328 1.227527 TATCTTGGTGCGATGGCGG 60.228 57.895 0.00 0.00 44.10 6.13
328 329 2.658679 TATCTTGGTGCGATGGCGGG 62.659 60.000 0.00 0.00 44.10 6.13
336 337 4.687215 CGATGGCGGGCGATGGAT 62.687 66.667 0.00 0.00 0.00 3.41
337 338 2.743928 GATGGCGGGCGATGGATC 60.744 66.667 0.00 0.00 0.00 3.36
338 339 3.535629 GATGGCGGGCGATGGATCA 62.536 63.158 0.00 0.00 0.00 2.92
339 340 3.541950 ATGGCGGGCGATGGATCAG 62.542 63.158 0.00 0.00 0.00 2.90
342 343 4.284860 CGGGCGATGGATCAGCGA 62.285 66.667 9.76 0.00 46.56 4.93
343 344 2.108976 GGGCGATGGATCAGCGAA 59.891 61.111 9.76 0.00 46.56 4.70
344 345 1.958205 GGGCGATGGATCAGCGAAG 60.958 63.158 9.76 0.00 46.56 3.79
345 346 1.958205 GGCGATGGATCAGCGAAGG 60.958 63.158 9.76 0.00 46.56 3.46
346 347 1.227380 GCGATGGATCAGCGAAGGT 60.227 57.895 9.76 0.00 46.56 3.50
347 348 1.218230 GCGATGGATCAGCGAAGGTC 61.218 60.000 9.76 0.00 46.56 3.85
348 349 0.936764 CGATGGATCAGCGAAGGTCG 60.937 60.000 0.00 0.00 46.56 4.79
349 350 0.598680 GATGGATCAGCGAAGGTCGG 60.599 60.000 0.00 0.00 40.84 4.79
350 351 2.586357 GGATCAGCGAAGGTCGGC 60.586 66.667 0.00 0.00 40.84 5.54
351 352 2.496817 GATCAGCGAAGGTCGGCT 59.503 61.111 0.00 0.00 40.84 5.52
352 353 1.153549 GATCAGCGAAGGTCGGCTT 60.154 57.895 0.00 0.00 40.84 4.35
353 354 0.741221 GATCAGCGAAGGTCGGCTTT 60.741 55.000 0.00 0.00 40.84 3.51
354 355 0.321653 ATCAGCGAAGGTCGGCTTTT 60.322 50.000 0.00 0.00 40.84 2.27
355 356 0.534203 TCAGCGAAGGTCGGCTTTTT 60.534 50.000 0.00 0.00 40.84 1.94
370 371 2.203365 TTTTTCTTGCGGGGCGGA 60.203 55.556 0.00 0.00 0.00 5.54
371 372 1.828660 TTTTTCTTGCGGGGCGGAA 60.829 52.632 0.00 0.00 35.65 4.30
376 377 3.711814 TTGCGGGGCGGAAGATGA 61.712 61.111 0.00 0.00 31.36 2.92
377 378 3.680620 TTGCGGGGCGGAAGATGAG 62.681 63.158 0.00 0.00 31.36 2.90
378 379 3.849951 GCGGGGCGGAAGATGAGA 61.850 66.667 0.00 0.00 0.00 3.27
379 380 2.419198 CGGGGCGGAAGATGAGAG 59.581 66.667 0.00 0.00 0.00 3.20
380 381 2.127869 CGGGGCGGAAGATGAGAGA 61.128 63.158 0.00 0.00 0.00 3.10
381 382 1.443828 GGGGCGGAAGATGAGAGAC 59.556 63.158 0.00 0.00 0.00 3.36
382 383 1.066587 GGGCGGAAGATGAGAGACG 59.933 63.158 0.00 0.00 0.00 4.18
383 384 1.384989 GGGCGGAAGATGAGAGACGA 61.385 60.000 0.00 0.00 0.00 4.20
384 385 0.456221 GGCGGAAGATGAGAGACGAA 59.544 55.000 0.00 0.00 0.00 3.85
385 386 1.551145 GCGGAAGATGAGAGACGAAC 58.449 55.000 0.00 0.00 0.00 3.95
386 387 1.135373 GCGGAAGATGAGAGACGAACA 60.135 52.381 0.00 0.00 0.00 3.18
387 388 2.520979 CGGAAGATGAGAGACGAACAC 58.479 52.381 0.00 0.00 0.00 3.32
388 389 2.095212 CGGAAGATGAGAGACGAACACA 60.095 50.000 0.00 0.00 0.00 3.72
389 390 3.246619 GGAAGATGAGAGACGAACACAC 58.753 50.000 0.00 0.00 0.00 3.82
390 391 3.305403 GGAAGATGAGAGACGAACACACA 60.305 47.826 0.00 0.00 0.00 3.72
391 392 3.290308 AGATGAGAGACGAACACACAC 57.710 47.619 0.00 0.00 0.00 3.82
392 393 1.979469 GATGAGAGACGAACACACACG 59.021 52.381 0.00 0.00 0.00 4.49
393 394 0.736636 TGAGAGACGAACACACACGT 59.263 50.000 0.00 0.00 45.32 4.49
394 395 1.133598 TGAGAGACGAACACACACGTT 59.866 47.619 0.00 0.00 42.74 3.99
395 396 1.779724 GAGAGACGAACACACACGTTC 59.220 52.381 0.00 0.00 42.74 3.95
396 397 1.404391 AGAGACGAACACACACGTTCT 59.596 47.619 0.00 0.00 42.57 3.01
397 398 1.517276 GAGACGAACACACACGTTCTG 59.483 52.381 0.00 0.00 42.57 3.02
398 399 0.575390 GACGAACACACACGTTCTGG 59.425 55.000 0.00 0.00 42.57 3.86
399 400 1.275657 CGAACACACACGTTCTGGC 59.724 57.895 0.00 0.00 42.57 4.85
400 401 1.275657 GAACACACACGTTCTGGCG 59.724 57.895 0.00 0.00 41.70 5.69
401 402 2.101209 GAACACACACGTTCTGGCGG 62.101 60.000 0.00 0.00 41.70 6.13
402 403 2.279851 CACACACGTTCTGGCGGA 60.280 61.111 0.00 0.00 35.98 5.54
403 404 2.029073 ACACACGTTCTGGCGGAG 59.971 61.111 0.00 0.00 35.98 4.63
404 405 2.338620 CACACGTTCTGGCGGAGA 59.661 61.111 0.00 0.00 35.98 3.71
405 406 1.734477 CACACGTTCTGGCGGAGAG 60.734 63.158 0.00 0.00 35.98 3.20
406 407 2.125912 CACGTTCTGGCGGAGAGG 60.126 66.667 0.00 0.00 35.98 3.69
407 408 2.282958 ACGTTCTGGCGGAGAGGA 60.283 61.111 0.00 0.00 35.98 3.71
408 409 2.344203 ACGTTCTGGCGGAGAGGAG 61.344 63.158 0.00 0.00 35.98 3.69
409 410 2.896443 GTTCTGGCGGAGAGGAGG 59.104 66.667 0.00 0.00 30.18 4.30
410 411 2.364317 TTCTGGCGGAGAGGAGGG 60.364 66.667 0.00 0.00 30.18 4.30
411 412 2.931180 TTCTGGCGGAGAGGAGGGA 61.931 63.158 0.00 0.00 30.18 4.20
412 413 3.151022 CTGGCGGAGAGGAGGGAC 61.151 72.222 0.00 0.00 0.00 4.46
415 416 3.827898 GCGGAGAGGAGGGACGTG 61.828 72.222 0.00 0.00 0.00 4.49
416 417 2.361357 CGGAGAGGAGGGACGTGT 60.361 66.667 0.00 0.00 0.00 4.49
417 418 1.977544 CGGAGAGGAGGGACGTGTT 60.978 63.158 0.00 0.00 0.00 3.32
418 419 1.592223 GGAGAGGAGGGACGTGTTG 59.408 63.158 0.00 0.00 0.00 3.33
419 420 1.186267 GGAGAGGAGGGACGTGTTGT 61.186 60.000 0.00 0.00 0.00 3.32
420 421 0.680061 GAGAGGAGGGACGTGTTGTT 59.320 55.000 0.00 0.00 0.00 2.83
421 422 0.680061 AGAGGAGGGACGTGTTGTTC 59.320 55.000 0.00 0.00 0.00 3.18
425 426 4.870190 GGGACGTGTTGTTCCAGT 57.130 55.556 0.00 0.00 46.75 4.00
426 427 2.613390 GGGACGTGTTGTTCCAGTC 58.387 57.895 0.00 0.00 46.75 3.51
427 428 0.106149 GGGACGTGTTGTTCCAGTCT 59.894 55.000 0.00 0.00 46.75 3.24
428 429 1.217882 GGACGTGTTGTTCCAGTCTG 58.782 55.000 0.00 0.00 32.86 3.51
429 430 1.472728 GGACGTGTTGTTCCAGTCTGT 60.473 52.381 0.00 0.00 32.86 3.41
430 431 1.859080 GACGTGTTGTTCCAGTCTGTC 59.141 52.381 0.00 0.00 0.00 3.51
431 432 1.480954 ACGTGTTGTTCCAGTCTGTCT 59.519 47.619 0.00 0.00 0.00 3.41
432 433 2.093658 ACGTGTTGTTCCAGTCTGTCTT 60.094 45.455 0.00 0.00 0.00 3.01
433 434 2.540101 CGTGTTGTTCCAGTCTGTCTTC 59.460 50.000 0.00 0.00 0.00 2.87
434 435 3.738281 CGTGTTGTTCCAGTCTGTCTTCT 60.738 47.826 0.00 0.00 0.00 2.85
435 436 4.499188 CGTGTTGTTCCAGTCTGTCTTCTA 60.499 45.833 0.00 0.00 0.00 2.10
436 437 5.357257 GTGTTGTTCCAGTCTGTCTTCTAA 58.643 41.667 0.00 0.00 0.00 2.10
437 438 5.992217 GTGTTGTTCCAGTCTGTCTTCTAAT 59.008 40.000 0.00 0.00 0.00 1.73
438 439 7.152645 GTGTTGTTCCAGTCTGTCTTCTAATA 58.847 38.462 0.00 0.00 0.00 0.98
439 440 7.329717 GTGTTGTTCCAGTCTGTCTTCTAATAG 59.670 40.741 0.00 0.00 0.00 1.73
440 441 7.015292 TGTTGTTCCAGTCTGTCTTCTAATAGT 59.985 37.037 0.00 0.00 0.00 2.12
441 442 7.540474 TGTTCCAGTCTGTCTTCTAATAGTT 57.460 36.000 0.00 0.00 0.00 2.24
442 443 7.603651 TGTTCCAGTCTGTCTTCTAATAGTTC 58.396 38.462 0.00 0.00 0.00 3.01
443 444 7.451877 TGTTCCAGTCTGTCTTCTAATAGTTCT 59.548 37.037 0.00 0.00 0.00 3.01
444 445 8.308207 GTTCCAGTCTGTCTTCTAATAGTTCTT 58.692 37.037 0.00 0.00 0.00 2.52
445 446 8.423906 TCCAGTCTGTCTTCTAATAGTTCTTT 57.576 34.615 0.00 0.00 0.00 2.52
446 447 8.871125 TCCAGTCTGTCTTCTAATAGTTCTTTT 58.129 33.333 0.00 0.00 0.00 2.27
447 448 9.145865 CCAGTCTGTCTTCTAATAGTTCTTTTC 57.854 37.037 0.00 0.00 0.00 2.29
448 449 8.855279 CAGTCTGTCTTCTAATAGTTCTTTTCG 58.145 37.037 0.00 0.00 0.00 3.46
449 450 8.578151 AGTCTGTCTTCTAATAGTTCTTTTCGT 58.422 33.333 0.00 0.00 0.00 3.85
450 451 9.194271 GTCTGTCTTCTAATAGTTCTTTTCGTT 57.806 33.333 0.00 0.00 0.00 3.85
451 452 9.760077 TCTGTCTTCTAATAGTTCTTTTCGTTT 57.240 29.630 0.00 0.00 0.00 3.60
452 453 9.798885 CTGTCTTCTAATAGTTCTTTTCGTTTG 57.201 33.333 0.00 0.00 0.00 2.93
453 454 9.537192 TGTCTTCTAATAGTTCTTTTCGTTTGA 57.463 29.630 0.00 0.00 0.00 2.69
483 484 4.796038 TTTAGGAAAATCGAGAGACGGT 57.204 40.909 0.00 0.00 46.97 4.83
484 485 2.943449 AGGAAAATCGAGAGACGGTC 57.057 50.000 0.00 0.00 46.97 4.79
485 486 2.168496 AGGAAAATCGAGAGACGGTCA 58.832 47.619 11.27 0.00 46.97 4.02
486 487 2.094649 AGGAAAATCGAGAGACGGTCAC 60.095 50.000 11.27 3.96 46.97 3.67
487 488 1.912110 GAAAATCGAGAGACGGTCACG 59.088 52.381 11.27 12.45 46.97 4.35
504 505 3.434452 CGTGACCGACGCTAGTATC 57.566 57.895 0.00 0.00 42.21 2.24
505 506 0.935898 CGTGACCGACGCTAGTATCT 59.064 55.000 0.00 0.00 42.21 1.98
506 507 1.329906 CGTGACCGACGCTAGTATCTT 59.670 52.381 0.00 0.00 42.21 2.40
507 508 2.223203 CGTGACCGACGCTAGTATCTTT 60.223 50.000 0.00 0.00 42.21 2.52
508 509 3.001634 CGTGACCGACGCTAGTATCTTTA 59.998 47.826 0.00 0.00 42.21 1.85
509 510 4.278058 GTGACCGACGCTAGTATCTTTAC 58.722 47.826 0.00 0.00 0.00 2.01
510 511 3.001634 TGACCGACGCTAGTATCTTTACG 59.998 47.826 0.00 0.00 33.32 3.18
511 512 3.198068 ACCGACGCTAGTATCTTTACGA 58.802 45.455 0.00 0.00 33.32 3.43
512 513 3.623060 ACCGACGCTAGTATCTTTACGAA 59.377 43.478 0.00 0.00 33.32 3.85
513 514 4.094887 ACCGACGCTAGTATCTTTACGAAA 59.905 41.667 0.00 0.00 33.32 3.46
514 515 4.669728 CCGACGCTAGTATCTTTACGAAAG 59.330 45.833 0.00 0.00 39.88 2.62
515 516 4.669728 CGACGCTAGTATCTTTACGAAAGG 59.330 45.833 0.00 0.00 39.01 3.11
516 517 5.573337 ACGCTAGTATCTTTACGAAAGGT 57.427 39.130 0.00 0.00 39.01 3.50
517 518 5.338365 ACGCTAGTATCTTTACGAAAGGTG 58.662 41.667 0.00 0.00 39.01 4.00
518 519 5.105997 ACGCTAGTATCTTTACGAAAGGTGT 60.106 40.000 0.00 0.00 39.01 4.16
519 520 5.803967 CGCTAGTATCTTTACGAAAGGTGTT 59.196 40.000 0.00 0.00 39.01 3.32
520 521 6.309737 CGCTAGTATCTTTACGAAAGGTGTTT 59.690 38.462 0.00 0.00 39.01 2.83
521 522 7.148689 CGCTAGTATCTTTACGAAAGGTGTTTT 60.149 37.037 0.00 0.00 39.01 2.43
522 523 8.501580 GCTAGTATCTTTACGAAAGGTGTTTTT 58.498 33.333 0.00 0.00 39.01 1.94
548 549 6.945938 TTTTCACTTGAAGGGTAATTTCGA 57.054 33.333 0.00 0.00 35.21 3.71
549 550 7.519032 TTTTCACTTGAAGGGTAATTTCGAT 57.481 32.000 0.00 0.00 35.21 3.59
550 551 6.494893 TTCACTTGAAGGGTAATTTCGATG 57.505 37.500 0.00 0.00 0.00 3.84
551 552 5.800296 TCACTTGAAGGGTAATTTCGATGA 58.200 37.500 0.00 0.00 0.00 2.92
552 553 5.642063 TCACTTGAAGGGTAATTTCGATGAC 59.358 40.000 0.00 0.00 0.00 3.06
553 554 4.630069 ACTTGAAGGGTAATTTCGATGACG 59.370 41.667 0.00 0.00 41.26 4.35
554 555 3.527533 TGAAGGGTAATTTCGATGACGG 58.472 45.455 0.00 0.00 40.21 4.79
555 556 3.055675 TGAAGGGTAATTTCGATGACGGT 60.056 43.478 0.00 0.00 40.21 4.83
556 557 2.901249 AGGGTAATTTCGATGACGGTG 58.099 47.619 0.00 0.00 40.21 4.94
557 558 2.498481 AGGGTAATTTCGATGACGGTGA 59.502 45.455 0.00 0.00 40.21 4.02
558 559 3.055675 AGGGTAATTTCGATGACGGTGAA 60.056 43.478 0.00 0.00 40.21 3.18
559 560 3.063045 GGGTAATTTCGATGACGGTGAAC 59.937 47.826 0.00 0.00 40.21 3.18
560 561 3.063045 GGTAATTTCGATGACGGTGAACC 59.937 47.826 0.00 0.00 40.21 3.62
561 562 1.734163 ATTTCGATGACGGTGAACCC 58.266 50.000 0.00 0.00 40.21 4.11
570 571 3.274067 GGTGAACCCGACCAATGC 58.726 61.111 0.00 0.00 33.25 3.56
571 572 2.686816 GGTGAACCCGACCAATGCG 61.687 63.158 0.00 0.00 33.25 4.73
572 573 1.964373 GTGAACCCGACCAATGCGT 60.964 57.895 0.00 0.00 0.00 5.24
573 574 1.963855 TGAACCCGACCAATGCGTG 60.964 57.895 0.00 0.00 0.00 5.34
574 575 3.322706 GAACCCGACCAATGCGTGC 62.323 63.158 0.00 0.00 0.00 5.34
575 576 3.842925 AACCCGACCAATGCGTGCT 62.843 57.895 0.00 0.00 0.00 4.40
576 577 3.055719 CCCGACCAATGCGTGCTT 61.056 61.111 0.00 0.00 0.00 3.91
577 578 2.625823 CCCGACCAATGCGTGCTTT 61.626 57.895 0.00 0.00 0.00 3.51
578 579 1.302383 CCCGACCAATGCGTGCTTTA 61.302 55.000 0.00 0.00 0.00 1.85
579 580 0.732571 CCGACCAATGCGTGCTTTAT 59.267 50.000 0.00 0.00 0.00 1.40
580 581 1.132262 CCGACCAATGCGTGCTTTATT 59.868 47.619 0.00 0.00 0.00 1.40
581 582 2.353269 CCGACCAATGCGTGCTTTATTA 59.647 45.455 0.00 0.00 0.00 0.98
582 583 3.546020 CCGACCAATGCGTGCTTTATTAG 60.546 47.826 0.00 0.00 0.00 1.73
583 584 3.063452 CGACCAATGCGTGCTTTATTAGT 59.937 43.478 0.00 0.00 0.00 2.24
584 585 4.269123 CGACCAATGCGTGCTTTATTAGTA 59.731 41.667 0.00 0.00 0.00 1.82
585 586 5.479716 ACCAATGCGTGCTTTATTAGTAC 57.520 39.130 0.00 0.00 36.26 2.73
586 587 4.334481 ACCAATGCGTGCTTTATTAGTACC 59.666 41.667 0.00 0.00 36.24 3.34
587 588 4.334203 CCAATGCGTGCTTTATTAGTACCA 59.666 41.667 0.00 0.00 36.24 3.25
588 589 5.008613 CCAATGCGTGCTTTATTAGTACCAT 59.991 40.000 0.00 0.00 36.24 3.55
589 590 5.924475 ATGCGTGCTTTATTAGTACCATC 57.076 39.130 0.00 0.00 36.24 3.51
590 591 5.018539 TGCGTGCTTTATTAGTACCATCT 57.981 39.130 0.00 0.00 36.24 2.90
591 592 5.047847 TGCGTGCTTTATTAGTACCATCTC 58.952 41.667 0.00 0.00 36.24 2.75
592 593 4.148348 GCGTGCTTTATTAGTACCATCTCG 59.852 45.833 0.00 0.00 36.24 4.04
593 594 5.279384 CGTGCTTTATTAGTACCATCTCGT 58.721 41.667 0.00 0.00 36.24 4.18
594 595 5.747197 CGTGCTTTATTAGTACCATCTCGTT 59.253 40.000 0.00 0.00 36.24 3.85
595 596 6.255020 CGTGCTTTATTAGTACCATCTCGTTT 59.745 38.462 0.00 0.00 36.24 3.60
596 597 7.433131 CGTGCTTTATTAGTACCATCTCGTTTA 59.567 37.037 0.00 0.00 36.24 2.01
597 598 9.257651 GTGCTTTATTAGTACCATCTCGTTTAT 57.742 33.333 0.00 0.00 33.79 1.40
633 634 6.320494 TGTCCATACAAATTGTAAAAGCGT 57.680 33.333 10.09 0.00 36.31 5.07
634 635 7.436430 TGTCCATACAAATTGTAAAAGCGTA 57.564 32.000 10.09 0.00 36.31 4.42
635 636 8.046294 TGTCCATACAAATTGTAAAAGCGTAT 57.954 30.769 10.09 0.00 36.31 3.06
636 637 8.516234 TGTCCATACAAATTGTAAAAGCGTATT 58.484 29.630 10.09 0.00 36.31 1.89
637 638 9.991388 GTCCATACAAATTGTAAAAGCGTATTA 57.009 29.630 10.09 0.00 36.31 0.98
647 648 9.764363 ATTGTAAAAGCGTATTATGAGATGAGA 57.236 29.630 0.00 0.00 0.00 3.27
648 649 9.594478 TTGTAAAAGCGTATTATGAGATGAGAA 57.406 29.630 0.00 0.00 0.00 2.87
649 650 9.249457 TGTAAAAGCGTATTATGAGATGAGAAG 57.751 33.333 0.00 0.00 0.00 2.85
650 651 9.464714 GTAAAAGCGTATTATGAGATGAGAAGA 57.535 33.333 0.00 0.00 0.00 2.87
651 652 8.948631 AAAAGCGTATTATGAGATGAGAAGAA 57.051 30.769 0.00 0.00 0.00 2.52
652 653 8.948631 AAAGCGTATTATGAGATGAGAAGAAA 57.051 30.769 0.00 0.00 0.00 2.52
653 654 9.553064 AAAGCGTATTATGAGATGAGAAGAAAT 57.447 29.630 0.00 0.00 0.00 2.17
654 655 8.755696 AGCGTATTATGAGATGAGAAGAAATC 57.244 34.615 0.00 0.00 0.00 2.17
655 656 7.540400 AGCGTATTATGAGATGAGAAGAAATCG 59.460 37.037 0.00 0.00 0.00 3.34
656 657 7.661859 CGTATTATGAGATGAGAAGAAATCGC 58.338 38.462 0.00 0.00 0.00 4.58
657 658 7.327032 CGTATTATGAGATGAGAAGAAATCGCA 59.673 37.037 0.00 0.00 42.29 5.10
659 660 8.618702 ATTATGAGATGAGAAGAAATCGCATT 57.381 30.769 7.10 0.00 46.88 3.56
660 661 5.729974 TGAGATGAGAAGAAATCGCATTG 57.270 39.130 0.00 0.00 46.88 2.82
661 662 5.181009 TGAGATGAGAAGAAATCGCATTGT 58.819 37.500 0.00 0.00 46.88 2.71
662 663 5.064325 TGAGATGAGAAGAAATCGCATTGTG 59.936 40.000 0.00 0.00 46.88 3.33
663 664 5.181009 AGATGAGAAGAAATCGCATTGTGA 58.819 37.500 1.78 1.78 46.88 3.58
664 665 5.821470 AGATGAGAAGAAATCGCATTGTGAT 59.179 36.000 6.89 6.89 46.88 3.06
665 666 5.225899 TGAGAAGAAATCGCATTGTGATG 57.774 39.130 13.20 0.00 32.48 3.07
666 667 4.095334 TGAGAAGAAATCGCATTGTGATGG 59.905 41.667 13.20 0.00 32.48 3.51
667 668 4.012374 AGAAGAAATCGCATTGTGATGGT 58.988 39.130 13.20 5.10 32.78 3.55
668 669 3.770263 AGAAATCGCATTGTGATGGTG 57.230 42.857 13.20 0.00 32.78 4.17
669 670 3.346315 AGAAATCGCATTGTGATGGTGA 58.654 40.909 13.20 0.00 32.78 4.02
670 671 3.758023 AGAAATCGCATTGTGATGGTGAA 59.242 39.130 13.20 0.00 32.78 3.18
671 672 4.400251 AGAAATCGCATTGTGATGGTGAAT 59.600 37.500 13.20 0.00 32.78 2.57
672 673 3.976793 ATCGCATTGTGATGGTGAATC 57.023 42.857 11.79 0.00 31.12 2.52
673 674 2.016318 TCGCATTGTGATGGTGAATCC 58.984 47.619 0.00 0.00 34.00 3.01
674 675 1.268184 CGCATTGTGATGGTGAATCCG 60.268 52.381 0.00 0.00 39.52 4.18
675 676 1.066002 GCATTGTGATGGTGAATCCGG 59.934 52.381 0.00 0.00 39.52 5.14
676 677 2.642427 CATTGTGATGGTGAATCCGGA 58.358 47.619 6.61 6.61 39.52 5.14
677 678 2.401583 TTGTGATGGTGAATCCGGAG 57.598 50.000 11.34 0.00 39.52 4.63
678 679 1.567357 TGTGATGGTGAATCCGGAGA 58.433 50.000 11.34 0.00 39.52 3.71
679 680 1.207089 TGTGATGGTGAATCCGGAGAC 59.793 52.381 11.34 7.03 39.52 3.36
680 681 0.830648 TGATGGTGAATCCGGAGACC 59.169 55.000 18.91 18.91 39.52 3.85
681 682 0.106894 GATGGTGAATCCGGAGACCC 59.893 60.000 21.56 14.14 39.52 4.46
682 683 0.620410 ATGGTGAATCCGGAGACCCA 60.620 55.000 21.56 18.37 39.52 4.51
683 684 0.838554 TGGTGAATCCGGAGACCCAA 60.839 55.000 21.56 6.77 39.52 4.12
684 685 0.546598 GGTGAATCCGGAGACCCAAT 59.453 55.000 11.34 0.00 0.00 3.16
685 686 1.475213 GGTGAATCCGGAGACCCAATC 60.475 57.143 11.34 0.03 0.00 2.67
686 687 0.837272 TGAATCCGGAGACCCAATCC 59.163 55.000 11.34 0.00 0.00 3.01
691 692 2.990479 GGAGACCCAATCCGTGCT 59.010 61.111 0.00 0.00 0.00 4.40
692 693 1.299976 GGAGACCCAATCCGTGCTT 59.700 57.895 0.00 0.00 0.00 3.91
693 694 0.322546 GGAGACCCAATCCGTGCTTT 60.323 55.000 0.00 0.00 0.00 3.51
694 695 1.065709 GGAGACCCAATCCGTGCTTTA 60.066 52.381 0.00 0.00 0.00 1.85
695 696 2.421529 GGAGACCCAATCCGTGCTTTAT 60.422 50.000 0.00 0.00 0.00 1.40
696 697 3.279434 GAGACCCAATCCGTGCTTTATT 58.721 45.455 0.00 0.00 0.00 1.40
697 698 4.448210 GAGACCCAATCCGTGCTTTATTA 58.552 43.478 0.00 0.00 0.00 0.98
698 699 5.048846 AGACCCAATCCGTGCTTTATTAT 57.951 39.130 0.00 0.00 0.00 1.28
699 700 5.445964 AGACCCAATCCGTGCTTTATTATT 58.554 37.500 0.00 0.00 0.00 1.40
700 701 6.597562 AGACCCAATCCGTGCTTTATTATTA 58.402 36.000 0.00 0.00 0.00 0.98
701 702 6.710744 AGACCCAATCCGTGCTTTATTATTAG 59.289 38.462 0.00 0.00 0.00 1.73
702 703 5.768164 ACCCAATCCGTGCTTTATTATTAGG 59.232 40.000 0.00 0.00 0.00 2.69
703 704 5.183140 CCCAATCCGTGCTTTATTATTAGGG 59.817 44.000 0.00 0.00 0.00 3.53
704 705 6.001460 CCAATCCGTGCTTTATTATTAGGGA 58.999 40.000 0.00 0.00 0.00 4.20
705 706 6.149474 CCAATCCGTGCTTTATTATTAGGGAG 59.851 42.308 0.00 0.00 0.00 4.30
706 707 6.681729 ATCCGTGCTTTATTATTAGGGAGA 57.318 37.500 0.00 0.00 0.00 3.71
707 708 6.097915 TCCGTGCTTTATTATTAGGGAGAG 57.902 41.667 0.00 0.00 0.00 3.20
708 709 5.836898 TCCGTGCTTTATTATTAGGGAGAGA 59.163 40.000 0.00 0.00 0.00 3.10
709 710 6.497259 TCCGTGCTTTATTATTAGGGAGAGAT 59.503 38.462 0.00 0.00 0.00 2.75
710 711 7.016268 TCCGTGCTTTATTATTAGGGAGAGATT 59.984 37.037 0.00 0.00 0.00 2.40
711 712 7.332182 CCGTGCTTTATTATTAGGGAGAGATTC 59.668 40.741 0.00 0.00 0.00 2.52
712 713 7.062371 CGTGCTTTATTATTAGGGAGAGATTCG 59.938 40.741 0.00 0.00 0.00 3.34
713 714 8.088981 GTGCTTTATTATTAGGGAGAGATTCGA 58.911 37.037 0.00 0.00 0.00 3.71
714 715 8.816894 TGCTTTATTATTAGGGAGAGATTCGAT 58.183 33.333 0.00 0.00 0.00 3.59
715 716 9.308318 GCTTTATTATTAGGGAGAGATTCGATC 57.692 37.037 0.00 0.00 0.00 3.69
716 717 9.509855 CTTTATTATTAGGGAGAGATTCGATCG 57.490 37.037 9.36 9.36 0.00 3.69
717 718 8.803397 TTATTATTAGGGAGAGATTCGATCGA 57.197 34.615 15.15 15.15 0.00 3.59
718 719 7.889873 ATTATTAGGGAGAGATTCGATCGAT 57.110 36.000 20.18 9.18 0.00 3.59
719 720 5.828299 ATTAGGGAGAGATTCGATCGATC 57.172 43.478 20.18 15.68 0.00 3.69
720 721 3.433306 AGGGAGAGATTCGATCGATCT 57.567 47.619 20.18 21.29 0.00 2.75
721 722 3.343617 AGGGAGAGATTCGATCGATCTC 58.656 50.000 29.97 29.97 40.69 2.75
780 781 1.142262 AGGCCGTCAACTAACTTGGTT 59.858 47.619 0.00 0.00 0.00 3.67
823 825 5.754782 TGTAATGAACCATATCCTGCTGTT 58.245 37.500 0.00 0.00 0.00 3.16
889 901 0.737219 GGCTGCATTCTCATGTCACC 59.263 55.000 0.50 0.00 32.28 4.02
1149 1241 4.727162 GCATCTCAATCTCTGCAAGAAACG 60.727 45.833 3.27 0.00 46.34 3.60
1150 1242 3.329386 TCTCAATCTCTGCAAGAAACGG 58.671 45.455 3.27 0.00 46.34 4.44
1183 1275 7.210174 GGCATATAATTCCCTTGTTTCTTTCC 58.790 38.462 0.00 0.00 0.00 3.13
1421 1770 2.607134 AGCAGGAGCAGGAGCAGT 60.607 61.111 0.00 0.00 45.49 4.40
1422 1771 2.182732 GAGCAGGAGCAGGAGCAGTT 62.183 60.000 0.00 0.00 45.49 3.16
1425 1780 0.391395 CAGGAGCAGGAGCAGTTGAG 60.391 60.000 0.00 0.00 45.49 3.02
1428 1783 0.319728 GAGCAGGAGCAGTTGAGTCA 59.680 55.000 0.00 0.00 45.49 3.41
1455 1810 0.878961 AACGACGACCCTGAAGCAAC 60.879 55.000 0.00 0.00 0.00 4.17
1456 1811 1.300620 CGACGACCCTGAAGCAACA 60.301 57.895 0.00 0.00 0.00 3.33
1457 1812 0.878523 CGACGACCCTGAAGCAACAA 60.879 55.000 0.00 0.00 0.00 2.83
1469 1824 3.936453 TGAAGCAACAAAACACGAGTAGT 59.064 39.130 0.00 0.00 0.00 2.73
1518 1874 4.873129 CGACTGGGCCATCGACCG 62.873 72.222 24.64 13.34 40.86 4.79
1519 1875 3.771160 GACTGGGCCATCGACCGT 61.771 66.667 6.72 0.00 0.00 4.83
1520 1876 3.718210 GACTGGGCCATCGACCGTC 62.718 68.421 6.72 6.08 0.00 4.79
1521 1877 4.873129 CTGGGCCATCGACCGTCG 62.873 72.222 14.94 14.94 42.10 5.12
1556 1914 4.196626 TGAGTTTCCGTTCGGATACAAT 57.803 40.909 26.70 13.88 38.26 2.71
1557 1915 5.327616 TGAGTTTCCGTTCGGATACAATA 57.672 39.130 26.70 14.98 38.26 1.90
1558 1916 5.104374 TGAGTTTCCGTTCGGATACAATAC 58.896 41.667 26.70 18.02 38.26 1.89
1559 1917 5.075858 AGTTTCCGTTCGGATACAATACA 57.924 39.130 26.70 5.92 38.26 2.29
1560 1918 5.481105 AGTTTCCGTTCGGATACAATACAA 58.519 37.500 26.70 10.71 38.26 2.41
1567 1925 6.347888 CCGTTCGGATACAATACAAAGTGTTT 60.348 38.462 5.19 0.00 35.19 2.83
1573 1931 7.749126 CGGATACAATACAAAGTGTTTTTCTCC 59.251 37.037 0.00 0.00 35.19 3.71
1620 2038 7.321153 GTTAGCTTTCTCATACAAGGTCACTA 58.679 38.462 0.00 0.00 32.96 2.74
1624 2042 6.702282 GCTTTCTCATACAAGGTCACTATACC 59.298 42.308 0.00 0.00 40.06 2.73
1690 2108 6.313658 GCCACTTTATTGATCAAAAATCCACC 59.686 38.462 13.09 0.00 0.00 4.61
1718 2136 2.034558 GGGATACAAATTGGGTCATGCG 59.965 50.000 0.00 0.00 39.74 4.73
1728 2146 3.372730 GTCATGCGGCTGGCCAAA 61.373 61.111 7.01 0.00 42.61 3.28
1745 2163 1.135402 CAAAAGCCATACTTGACGCCC 60.135 52.381 0.00 0.00 39.09 6.13
1750 2168 0.251916 CCATACTTGACGCCCCTGAA 59.748 55.000 0.00 0.00 0.00 3.02
1755 2173 0.895530 CTTGACGCCCCTGAACTAGA 59.104 55.000 0.00 0.00 0.00 2.43
1763 2181 3.433314 CGCCCCTGAACTAGAGTAGTAGA 60.433 52.174 0.00 0.00 38.26 2.59
1817 2235 0.383949 GCACGCCCTTCAAAAGTGAA 59.616 50.000 0.00 0.00 41.57 3.18
1907 2325 1.068753 CTGTCGGCTCCTGCTATGG 59.931 63.158 0.00 0.00 39.59 2.74
1928 2346 3.694566 GGTTGTTGAGTTTGTTGTCTCCT 59.305 43.478 0.00 0.00 0.00 3.69
1966 2384 5.041695 TGGATCCATACCTGAATATCCCT 57.958 43.478 11.44 0.00 33.43 4.20
1993 2411 5.106396 CCAAGAATTCTCAGCAGACGAATTT 60.106 40.000 8.78 0.00 37.46 1.82
2033 2451 2.658325 GCAATTGAAGCAATGTCGTGTC 59.342 45.455 10.34 0.00 34.04 3.67
2071 2489 6.116126 GCACTGGAACATTAGAATTCTAGGT 58.884 40.000 14.63 13.86 37.65 3.08
2072 2490 6.037610 GCACTGGAACATTAGAATTCTAGGTG 59.962 42.308 20.05 20.05 37.65 4.00
2102 2520 1.825474 TCTCCTTCGTTGGGTCATCTC 59.175 52.381 0.00 0.00 0.00 2.75
2105 2523 1.134670 CCTTCGTTGGGTCATCTCCTC 60.135 57.143 0.00 0.00 0.00 3.71
2108 2526 1.757118 TCGTTGGGTCATCTCCTCATC 59.243 52.381 0.00 0.00 0.00 2.92
2182 2600 0.965866 TGCGTTCTCCTCGTCCTCAT 60.966 55.000 0.00 0.00 0.00 2.90
2191 2609 2.100197 CCTCGTCCTCATTGTGGTCTA 58.900 52.381 4.76 0.00 0.00 2.59
2192 2610 2.695666 CCTCGTCCTCATTGTGGTCTAT 59.304 50.000 4.76 0.00 0.00 1.98
2259 2677 2.166459 CGAGGCAATCTCCAAGTACTCA 59.834 50.000 0.00 0.00 39.30 3.41
2268 2686 3.951680 TCTCCAAGTACTCATCGCATACA 59.048 43.478 0.00 0.00 0.00 2.29
2319 2737 0.904865 TGGCGACAGTGAGGAGGATT 60.905 55.000 0.00 0.00 35.01 3.01
2332 2750 4.044571 TGAGGAGGATTTGATTGACCCTTT 59.955 41.667 0.00 0.00 0.00 3.11
2334 2752 4.774200 AGGAGGATTTGATTGACCCTTTTG 59.226 41.667 0.00 0.00 0.00 2.44
2380 2798 5.666265 AGGGGTACAAGAAAACTATCTAGGG 59.334 44.000 0.00 0.00 0.00 3.53
2383 2801 6.049790 GGTACAAGAAAACTATCTAGGGCAG 58.950 44.000 0.00 0.00 0.00 4.85
2432 2850 7.924358 AGTATATGATTGTACACCCCTTGTA 57.076 36.000 0.00 0.00 39.91 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 161 0.518636 TCGAGGAGGACGTTACGTTG 59.481 55.000 12.82 0.00 41.37 4.10
161 162 0.519077 GTCGAGGAGGACGTTACGTT 59.481 55.000 12.82 0.00 41.37 3.99
162 163 0.603707 TGTCGAGGAGGACGTTACGT 60.604 55.000 11.12 11.12 45.10 3.57
163 164 0.518636 TTGTCGAGGAGGACGTTACG 59.481 55.000 2.19 2.19 39.83 3.18
164 165 1.731750 GCTTGTCGAGGAGGACGTTAC 60.732 57.143 0.00 0.00 39.83 2.50
165 166 0.524862 GCTTGTCGAGGAGGACGTTA 59.475 55.000 0.00 0.00 39.83 3.18
166 167 1.289380 GCTTGTCGAGGAGGACGTT 59.711 57.895 0.00 0.00 39.83 3.99
167 168 2.963371 GCTTGTCGAGGAGGACGT 59.037 61.111 0.00 0.00 39.83 4.34
168 169 2.202492 CGCTTGTCGAGGAGGACG 60.202 66.667 0.00 0.00 41.67 4.79
169 170 2.507324 GCGCTTGTCGAGGAGGAC 60.507 66.667 0.00 0.00 41.67 3.85
170 171 2.492449 CTTGCGCTTGTCGAGGAGGA 62.492 60.000 9.73 0.00 41.67 3.71
171 172 2.048222 TTGCGCTTGTCGAGGAGG 60.048 61.111 9.73 0.00 41.67 4.30
172 173 1.347817 GACTTGCGCTTGTCGAGGAG 61.348 60.000 9.73 0.00 41.67 3.69
173 174 1.372997 GACTTGCGCTTGTCGAGGA 60.373 57.895 9.73 0.00 41.67 3.71
174 175 3.159984 GACTTGCGCTTGTCGAGG 58.840 61.111 9.73 0.00 41.67 4.63
178 179 0.161870 GTTCTCGACTTGCGCTTGTC 59.838 55.000 18.62 18.62 40.61 3.18
179 180 1.548973 CGTTCTCGACTTGCGCTTGT 61.549 55.000 9.73 7.33 40.61 3.16
180 181 1.128611 CGTTCTCGACTTGCGCTTG 59.871 57.895 9.73 3.49 40.61 4.01
181 182 1.299926 ACGTTCTCGACTTGCGCTT 60.300 52.632 9.73 0.00 40.61 4.68
182 183 2.016704 CACGTTCTCGACTTGCGCT 61.017 57.895 9.73 0.00 40.61 5.92
183 184 2.465920 CACGTTCTCGACTTGCGC 59.534 61.111 0.00 0.00 40.61 6.09
184 185 3.000080 GCCACGTTCTCGACTTGCG 62.000 63.158 0.00 0.00 40.62 4.85
185 186 2.668280 GGCCACGTTCTCGACTTGC 61.668 63.158 0.00 0.00 40.62 4.01
186 187 2.372690 CGGCCACGTTCTCGACTTG 61.373 63.158 2.24 0.00 40.62 3.16
187 188 1.874345 ATCGGCCACGTTCTCGACTT 61.874 55.000 2.24 0.00 41.85 3.01
188 189 2.341101 ATCGGCCACGTTCTCGACT 61.341 57.895 2.24 0.00 41.85 4.18
189 190 2.158959 CATCGGCCACGTTCTCGAC 61.159 63.158 2.24 0.00 41.85 4.20
190 191 1.868987 TTCATCGGCCACGTTCTCGA 61.869 55.000 2.24 6.38 41.85 4.04
191 192 1.413767 CTTCATCGGCCACGTTCTCG 61.414 60.000 2.24 0.00 41.85 4.04
192 193 0.389948 ACTTCATCGGCCACGTTCTC 60.390 55.000 2.24 0.00 41.85 2.87
193 194 0.670546 CACTTCATCGGCCACGTTCT 60.671 55.000 2.24 0.00 41.85 3.01
194 195 1.635663 CCACTTCATCGGCCACGTTC 61.636 60.000 2.24 0.00 41.85 3.95
195 196 1.671054 CCACTTCATCGGCCACGTT 60.671 57.895 2.24 0.00 41.85 3.99
196 197 2.047274 CCACTTCATCGGCCACGT 60.047 61.111 2.24 0.00 41.85 4.49
197 198 2.100631 GTCCACTTCATCGGCCACG 61.101 63.158 2.24 0.00 42.74 4.94
198 199 1.745489 GGTCCACTTCATCGGCCAC 60.745 63.158 2.24 0.00 0.00 5.01
199 200 1.918293 AGGTCCACTTCATCGGCCA 60.918 57.895 2.24 0.00 0.00 5.36
200 201 1.450312 CAGGTCCACTTCATCGGCC 60.450 63.158 0.00 0.00 0.00 6.13
201 202 1.450312 CCAGGTCCACTTCATCGGC 60.450 63.158 0.00 0.00 0.00 5.54
202 203 0.108138 GTCCAGGTCCACTTCATCGG 60.108 60.000 0.00 0.00 0.00 4.18
203 204 0.108138 GGTCCAGGTCCACTTCATCG 60.108 60.000 0.00 0.00 0.00 3.84
204 205 1.208293 GAGGTCCAGGTCCACTTCATC 59.792 57.143 5.43 0.00 0.00 2.92
205 206 1.280457 GAGGTCCAGGTCCACTTCAT 58.720 55.000 5.43 0.00 0.00 2.57
206 207 1.185618 CGAGGTCCAGGTCCACTTCA 61.186 60.000 5.43 0.00 0.00 3.02
207 208 1.592223 CGAGGTCCAGGTCCACTTC 59.408 63.158 5.43 0.00 0.00 3.01
208 209 2.584391 GCGAGGTCCAGGTCCACTT 61.584 63.158 5.43 0.00 0.00 3.16
209 210 2.997897 GCGAGGTCCAGGTCCACT 60.998 66.667 5.43 0.00 0.00 4.00
210 211 2.997897 AGCGAGGTCCAGGTCCAC 60.998 66.667 5.43 0.00 0.00 4.02
211 212 2.680352 GAGCGAGGTCCAGGTCCA 60.680 66.667 5.43 0.00 0.00 4.02
212 213 3.462678 GGAGCGAGGTCCAGGTCC 61.463 72.222 15.65 16.51 45.94 4.46
213 214 2.680352 TGGAGCGAGGTCCAGGTC 60.680 66.667 18.85 7.73 41.99 3.85
218 219 1.153549 GTGTCATGGAGCGAGGTCC 60.154 63.158 13.90 13.90 37.10 4.46
219 220 0.459237 CAGTGTCATGGAGCGAGGTC 60.459 60.000 0.00 0.00 0.00 3.85
220 221 0.900182 TCAGTGTCATGGAGCGAGGT 60.900 55.000 0.00 0.00 0.00 3.85
221 222 0.179116 CTCAGTGTCATGGAGCGAGG 60.179 60.000 0.00 0.00 0.00 4.63
222 223 0.805322 GCTCAGTGTCATGGAGCGAG 60.805 60.000 11.46 1.55 43.83 5.03
223 224 1.216444 GCTCAGTGTCATGGAGCGA 59.784 57.895 11.46 0.00 43.83 4.93
224 225 3.791539 GCTCAGTGTCATGGAGCG 58.208 61.111 11.46 0.00 43.83 5.03
226 227 2.486472 AAAGGCTCAGTGTCATGGAG 57.514 50.000 0.00 0.00 0.00 3.86
227 228 2.106338 TGAAAAGGCTCAGTGTCATGGA 59.894 45.455 0.00 0.00 0.00 3.41
228 229 2.507484 TGAAAAGGCTCAGTGTCATGG 58.493 47.619 0.00 0.00 0.00 3.66
229 230 3.181513 CGATGAAAAGGCTCAGTGTCATG 60.182 47.826 0.00 0.00 0.00 3.07
230 231 3.005554 CGATGAAAAGGCTCAGTGTCAT 58.994 45.455 0.00 0.00 0.00 3.06
231 232 2.416747 CGATGAAAAGGCTCAGTGTCA 58.583 47.619 0.00 0.00 0.00 3.58
232 233 1.734465 CCGATGAAAAGGCTCAGTGTC 59.266 52.381 0.00 0.00 0.00 3.67
233 234 1.813513 CCGATGAAAAGGCTCAGTGT 58.186 50.000 0.00 0.00 0.00 3.55
275 276 1.524621 CATCCTGGACATGGGCGAC 60.525 63.158 0.00 0.00 0.00 5.19
276 277 1.688884 TCATCCTGGACATGGGCGA 60.689 57.895 0.00 0.00 0.00 5.54
277 278 1.524621 GTCATCCTGGACATGGGCG 60.525 63.158 0.00 0.00 37.73 6.13
278 279 1.152881 GGTCATCCTGGACATGGGC 60.153 63.158 0.00 0.00 39.59 5.36
279 280 1.146930 CGGTCATCCTGGACATGGG 59.853 63.158 0.00 0.00 39.59 4.00
280 281 1.524621 GCGGTCATCCTGGACATGG 60.525 63.158 0.00 0.00 39.59 3.66
281 282 0.752658 TAGCGGTCATCCTGGACATG 59.247 55.000 0.00 0.00 39.59 3.21
282 283 0.753262 GTAGCGGTCATCCTGGACAT 59.247 55.000 0.00 0.00 39.59 3.06
283 284 1.327690 GGTAGCGGTCATCCTGGACA 61.328 60.000 0.00 0.00 39.59 4.02
284 285 1.043673 AGGTAGCGGTCATCCTGGAC 61.044 60.000 0.00 0.00 37.06 4.02
285 286 0.755698 GAGGTAGCGGTCATCCTGGA 60.756 60.000 0.00 0.00 0.00 3.86
286 287 1.742768 GAGGTAGCGGTCATCCTGG 59.257 63.158 9.95 0.00 0.00 4.45
287 288 1.360551 CGAGGTAGCGGTCATCCTG 59.639 63.158 9.95 1.48 0.00 3.86
288 289 2.491022 GCGAGGTAGCGGTCATCCT 61.491 63.158 0.00 0.00 0.00 3.24
289 290 2.027751 GCGAGGTAGCGGTCATCC 59.972 66.667 0.00 0.00 0.00 3.51
290 291 2.027751 GGCGAGGTAGCGGTCATC 59.972 66.667 0.00 0.00 38.18 2.92
291 292 3.900892 CGGCGAGGTAGCGGTCAT 61.901 66.667 0.00 0.00 38.18 3.06
292 293 3.974835 TACGGCGAGGTAGCGGTCA 62.975 63.158 16.62 0.00 45.50 4.02
293 294 2.455183 GATACGGCGAGGTAGCGGTC 62.455 65.000 16.62 0.00 45.50 4.79
295 296 1.793134 AAGATACGGCGAGGTAGCGG 61.793 60.000 16.62 0.00 42.21 5.52
296 297 0.660595 CAAGATACGGCGAGGTAGCG 60.661 60.000 16.62 0.00 38.18 4.26
297 298 0.318784 CCAAGATACGGCGAGGTAGC 60.319 60.000 16.62 0.00 0.00 3.58
298 299 1.030457 ACCAAGATACGGCGAGGTAG 58.970 55.000 16.62 0.00 0.00 3.18
299 300 0.742505 CACCAAGATACGGCGAGGTA 59.257 55.000 16.62 0.00 0.00 3.08
300 301 1.515954 CACCAAGATACGGCGAGGT 59.484 57.895 16.62 8.45 0.00 3.85
301 302 1.883084 GCACCAAGATACGGCGAGG 60.883 63.158 16.62 7.78 0.00 4.63
302 303 3.706140 GCACCAAGATACGGCGAG 58.294 61.111 16.62 0.00 0.00 5.03
305 306 1.498865 CCATCGCACCAAGATACGGC 61.499 60.000 0.00 0.00 0.00 5.68
306 307 1.498865 GCCATCGCACCAAGATACGG 61.499 60.000 0.00 0.00 34.03 4.02
307 308 1.821241 CGCCATCGCACCAAGATACG 61.821 60.000 0.00 0.00 34.03 3.06
308 309 1.498865 CCGCCATCGCACCAAGATAC 61.499 60.000 0.00 0.00 34.03 2.24
309 310 1.227527 CCGCCATCGCACCAAGATA 60.228 57.895 0.00 0.00 34.03 1.98
310 311 2.514592 CCGCCATCGCACCAAGAT 60.515 61.111 0.00 0.00 34.03 2.40
311 312 4.776322 CCCGCCATCGCACCAAGA 62.776 66.667 0.00 0.00 34.03 3.02
319 320 4.687215 ATCCATCGCCCGCCATCG 62.687 66.667 0.00 0.00 0.00 3.84
320 321 2.743928 GATCCATCGCCCGCCATC 60.744 66.667 0.00 0.00 0.00 3.51
321 322 3.541950 CTGATCCATCGCCCGCCAT 62.542 63.158 0.00 0.00 0.00 4.40
322 323 4.240103 CTGATCCATCGCCCGCCA 62.240 66.667 0.00 0.00 0.00 5.69
325 326 3.790334 TTCGCTGATCCATCGCCCG 62.790 63.158 0.00 0.00 0.00 6.13
326 327 1.958205 CTTCGCTGATCCATCGCCC 60.958 63.158 0.00 0.00 0.00 6.13
327 328 1.958205 CCTTCGCTGATCCATCGCC 60.958 63.158 0.00 0.00 0.00 5.54
328 329 1.218230 GACCTTCGCTGATCCATCGC 61.218 60.000 0.00 0.00 0.00 4.58
329 330 0.936764 CGACCTTCGCTGATCCATCG 60.937 60.000 0.00 0.00 31.14 3.84
330 331 0.598680 CCGACCTTCGCTGATCCATC 60.599 60.000 0.00 0.00 38.82 3.51
331 332 1.443407 CCGACCTTCGCTGATCCAT 59.557 57.895 0.00 0.00 38.82 3.41
332 333 2.892640 CCGACCTTCGCTGATCCA 59.107 61.111 0.00 0.00 38.82 3.41
333 334 2.579684 AAGCCGACCTTCGCTGATCC 62.580 60.000 0.00 0.00 38.82 3.36
334 335 0.741221 AAAGCCGACCTTCGCTGATC 60.741 55.000 0.00 0.00 38.82 2.92
335 336 0.321653 AAAAGCCGACCTTCGCTGAT 60.322 50.000 0.00 0.00 38.82 2.90
336 337 0.534203 AAAAAGCCGACCTTCGCTGA 60.534 50.000 0.00 0.00 38.82 4.26
337 338 1.949257 AAAAAGCCGACCTTCGCTG 59.051 52.632 0.00 0.00 38.82 5.18
338 339 4.475527 AAAAAGCCGACCTTCGCT 57.524 50.000 0.00 0.00 38.82 4.93
353 354 1.801309 CTTCCGCCCCGCAAGAAAAA 61.801 55.000 0.00 0.00 43.02 1.94
354 355 2.203365 TTCCGCCCCGCAAGAAAA 60.203 55.556 0.00 0.00 43.02 2.29
355 356 2.478335 ATCTTCCGCCCCGCAAGAAA 62.478 55.000 0.00 0.00 43.02 2.52
356 357 2.966732 ATCTTCCGCCCCGCAAGAA 61.967 57.895 0.00 0.00 43.02 2.52
357 358 3.399181 ATCTTCCGCCCCGCAAGA 61.399 61.111 0.00 0.00 43.02 3.02
358 359 3.204827 CATCTTCCGCCCCGCAAG 61.205 66.667 0.00 0.00 0.00 4.01
359 360 3.680620 CTCATCTTCCGCCCCGCAA 62.681 63.158 0.00 0.00 0.00 4.85
360 361 4.161295 CTCATCTTCCGCCCCGCA 62.161 66.667 0.00 0.00 0.00 5.69
361 362 3.798954 CTCTCATCTTCCGCCCCGC 62.799 68.421 0.00 0.00 0.00 6.13
362 363 2.127869 TCTCTCATCTTCCGCCCCG 61.128 63.158 0.00 0.00 0.00 5.73
363 364 1.443828 GTCTCTCATCTTCCGCCCC 59.556 63.158 0.00 0.00 0.00 5.80
364 365 1.066587 CGTCTCTCATCTTCCGCCC 59.933 63.158 0.00 0.00 0.00 6.13
365 366 0.456221 TTCGTCTCTCATCTTCCGCC 59.544 55.000 0.00 0.00 0.00 6.13
366 367 1.135373 TGTTCGTCTCTCATCTTCCGC 60.135 52.381 0.00 0.00 0.00 5.54
367 368 2.095212 TGTGTTCGTCTCTCATCTTCCG 60.095 50.000 0.00 0.00 0.00 4.30
368 369 3.246619 GTGTGTTCGTCTCTCATCTTCC 58.753 50.000 0.00 0.00 0.00 3.46
369 370 3.670991 GTGTGTGTTCGTCTCTCATCTTC 59.329 47.826 0.00 0.00 0.00 2.87
370 371 3.643763 GTGTGTGTTCGTCTCTCATCTT 58.356 45.455 0.00 0.00 0.00 2.40
371 372 2.350868 CGTGTGTGTTCGTCTCTCATCT 60.351 50.000 0.00 0.00 0.00 2.90
372 373 1.979469 CGTGTGTGTTCGTCTCTCATC 59.021 52.381 0.00 0.00 0.00 2.92
373 374 1.337071 ACGTGTGTGTTCGTCTCTCAT 59.663 47.619 0.00 0.00 35.30 2.90
374 375 0.736636 ACGTGTGTGTTCGTCTCTCA 59.263 50.000 0.00 0.00 35.30 3.27
375 376 1.779724 GAACGTGTGTGTTCGTCTCTC 59.220 52.381 0.00 0.00 38.91 3.20
376 377 1.836383 GAACGTGTGTGTTCGTCTCT 58.164 50.000 0.00 0.00 38.91 3.10
382 383 1.275657 CGCCAGAACGTGTGTGTTC 59.724 57.895 0.00 0.00 46.78 3.18
383 384 2.177580 CCGCCAGAACGTGTGTGTT 61.178 57.895 0.00 0.00 34.02 3.32
384 385 2.587753 CCGCCAGAACGTGTGTGT 60.588 61.111 0.00 0.00 0.00 3.72
385 386 2.279851 TCCGCCAGAACGTGTGTG 60.280 61.111 0.00 0.00 0.00 3.82
386 387 2.029073 CTCCGCCAGAACGTGTGT 59.971 61.111 0.00 0.00 0.00 3.72
387 388 1.734477 CTCTCCGCCAGAACGTGTG 60.734 63.158 0.00 0.00 0.00 3.82
388 389 2.651361 CTCTCCGCCAGAACGTGT 59.349 61.111 0.00 0.00 0.00 4.49
389 390 2.125912 CCTCTCCGCCAGAACGTG 60.126 66.667 0.00 0.00 0.00 4.49
390 391 2.282958 TCCTCTCCGCCAGAACGT 60.283 61.111 0.00 0.00 0.00 3.99
391 392 2.492090 CTCCTCTCCGCCAGAACG 59.508 66.667 0.00 0.00 0.00 3.95
392 393 2.726351 CCCTCCTCTCCGCCAGAAC 61.726 68.421 0.00 0.00 0.00 3.01
393 394 2.364317 CCCTCCTCTCCGCCAGAA 60.364 66.667 0.00 0.00 0.00 3.02
394 395 3.347590 TCCCTCCTCTCCGCCAGA 61.348 66.667 0.00 0.00 0.00 3.86
395 396 3.151022 GTCCCTCCTCTCCGCCAG 61.151 72.222 0.00 0.00 0.00 4.85
398 399 3.827898 CACGTCCCTCCTCTCCGC 61.828 72.222 0.00 0.00 0.00 5.54
399 400 1.977544 AACACGTCCCTCCTCTCCG 60.978 63.158 0.00 0.00 0.00 4.63
400 401 1.186267 ACAACACGTCCCTCCTCTCC 61.186 60.000 0.00 0.00 0.00 3.71
401 402 0.680061 AACAACACGTCCCTCCTCTC 59.320 55.000 0.00 0.00 0.00 3.20
402 403 0.680061 GAACAACACGTCCCTCCTCT 59.320 55.000 0.00 0.00 0.00 3.69
403 404 0.320508 GGAACAACACGTCCCTCCTC 60.321 60.000 0.00 0.00 0.00 3.71
404 405 1.052124 TGGAACAACACGTCCCTCCT 61.052 55.000 0.00 0.00 31.92 3.69
405 406 0.602905 CTGGAACAACACGTCCCTCC 60.603 60.000 0.00 0.00 38.70 4.30
406 407 0.106149 ACTGGAACAACACGTCCCTC 59.894 55.000 0.00 0.00 38.70 4.30
407 408 0.106149 GACTGGAACAACACGTCCCT 59.894 55.000 0.00 0.00 38.70 4.20
408 409 0.106149 AGACTGGAACAACACGTCCC 59.894 55.000 0.00 0.00 38.70 4.46
409 410 1.217882 CAGACTGGAACAACACGTCC 58.782 55.000 0.00 0.00 38.70 4.79
410 411 1.859080 GACAGACTGGAACAACACGTC 59.141 52.381 7.51 0.00 38.70 4.34
411 412 1.480954 AGACAGACTGGAACAACACGT 59.519 47.619 7.51 0.00 38.70 4.49
412 413 2.225068 AGACAGACTGGAACAACACG 57.775 50.000 7.51 0.00 38.70 4.49
413 414 3.798202 AGAAGACAGACTGGAACAACAC 58.202 45.455 7.51 0.00 38.70 3.32
414 415 5.607939 TTAGAAGACAGACTGGAACAACA 57.392 39.130 7.51 0.00 38.70 3.33
415 416 7.379750 ACTATTAGAAGACAGACTGGAACAAC 58.620 38.462 7.51 0.00 38.70 3.32
416 417 7.540474 ACTATTAGAAGACAGACTGGAACAA 57.460 36.000 7.51 0.00 38.70 2.83
417 418 7.451877 AGAACTATTAGAAGACAGACTGGAACA 59.548 37.037 7.51 0.00 0.00 3.18
418 419 7.832769 AGAACTATTAGAAGACAGACTGGAAC 58.167 38.462 7.51 0.00 0.00 3.62
419 420 8.423906 AAGAACTATTAGAAGACAGACTGGAA 57.576 34.615 7.51 0.00 0.00 3.53
420 421 8.423906 AAAGAACTATTAGAAGACAGACTGGA 57.576 34.615 7.51 0.00 0.00 3.86
421 422 9.145865 GAAAAGAACTATTAGAAGACAGACTGG 57.854 37.037 7.51 0.00 0.00 4.00
422 423 8.855279 CGAAAAGAACTATTAGAAGACAGACTG 58.145 37.037 0.00 0.00 0.00 3.51
423 424 8.578151 ACGAAAAGAACTATTAGAAGACAGACT 58.422 33.333 0.00 0.00 0.00 3.24
424 425 8.745464 ACGAAAAGAACTATTAGAAGACAGAC 57.255 34.615 0.00 0.00 0.00 3.51
425 426 9.760077 AAACGAAAAGAACTATTAGAAGACAGA 57.240 29.630 0.00 0.00 0.00 3.41
426 427 9.798885 CAAACGAAAAGAACTATTAGAAGACAG 57.201 33.333 0.00 0.00 0.00 3.51
427 428 9.537192 TCAAACGAAAAGAACTATTAGAAGACA 57.463 29.630 0.00 0.00 0.00 3.41
460 461 5.544650 ACCGTCTCTCGATTTTCCTAAAAA 58.455 37.500 0.00 0.00 42.86 1.94
461 462 5.143376 ACCGTCTCTCGATTTTCCTAAAA 57.857 39.130 0.00 0.00 42.86 1.52
462 463 4.219070 TGACCGTCTCTCGATTTTCCTAAA 59.781 41.667 0.00 0.00 42.86 1.85
463 464 3.760151 TGACCGTCTCTCGATTTTCCTAA 59.240 43.478 0.00 0.00 42.86 2.69
464 465 3.128242 GTGACCGTCTCTCGATTTTCCTA 59.872 47.826 0.00 0.00 42.86 2.94
465 466 2.094649 GTGACCGTCTCTCGATTTTCCT 60.095 50.000 0.00 0.00 42.86 3.36
466 467 2.260481 GTGACCGTCTCTCGATTTTCC 58.740 52.381 0.00 0.00 42.86 3.13
467 468 1.912110 CGTGACCGTCTCTCGATTTTC 59.088 52.381 0.00 0.00 42.86 2.29
468 469 1.268899 ACGTGACCGTCTCTCGATTTT 59.731 47.619 14.50 0.00 46.28 1.82
469 470 0.879765 ACGTGACCGTCTCTCGATTT 59.120 50.000 14.50 0.00 46.28 2.17
470 471 0.168348 CACGTGACCGTCTCTCGATT 59.832 55.000 10.90 0.00 46.28 3.34
471 472 0.672711 TCACGTGACCGTCTCTCGAT 60.673 55.000 15.76 1.92 46.28 3.59
472 473 1.301165 TCACGTGACCGTCTCTCGA 60.301 57.895 15.76 0.00 46.28 4.04
473 474 1.154450 GTCACGTGACCGTCTCTCG 60.154 63.158 33.62 5.18 46.28 4.04
474 475 4.843101 GTCACGTGACCGTCTCTC 57.157 61.111 33.62 9.97 46.28 3.20
487 488 3.417690 AAAGATACTAGCGTCGGTCAC 57.582 47.619 0.00 0.00 0.00 3.67
488 489 3.001634 CGTAAAGATACTAGCGTCGGTCA 59.998 47.826 0.00 0.00 0.00 4.02
489 490 3.246226 TCGTAAAGATACTAGCGTCGGTC 59.754 47.826 0.00 0.00 0.00 4.79
490 491 3.198068 TCGTAAAGATACTAGCGTCGGT 58.802 45.455 1.19 1.19 0.00 4.69
491 492 3.867055 TCGTAAAGATACTAGCGTCGG 57.133 47.619 0.00 0.00 0.00 4.79
492 493 4.669728 CCTTTCGTAAAGATACTAGCGTCG 59.330 45.833 8.37 0.00 41.02 5.12
493 494 5.454877 CACCTTTCGTAAAGATACTAGCGTC 59.545 44.000 8.37 0.00 41.02 5.19
494 495 5.105997 ACACCTTTCGTAAAGATACTAGCGT 60.106 40.000 8.37 0.00 41.02 5.07
495 496 5.338365 ACACCTTTCGTAAAGATACTAGCG 58.662 41.667 8.37 0.00 41.02 4.26
496 497 7.592439 AAACACCTTTCGTAAAGATACTAGC 57.408 36.000 8.37 0.00 41.02 3.42
524 525 7.336161 TCGAAATTACCCTTCAAGTGAAAAA 57.664 32.000 0.00 0.00 33.07 1.94
525 526 6.945938 TCGAAATTACCCTTCAAGTGAAAA 57.054 33.333 0.00 0.00 33.07 2.29
526 527 6.712998 TCATCGAAATTACCCTTCAAGTGAAA 59.287 34.615 0.00 0.00 33.07 2.69
527 528 6.148811 GTCATCGAAATTACCCTTCAAGTGAA 59.851 38.462 0.00 0.00 0.00 3.18
528 529 5.642063 GTCATCGAAATTACCCTTCAAGTGA 59.358 40.000 0.00 0.00 0.00 3.41
529 530 5.445939 CGTCATCGAAATTACCCTTCAAGTG 60.446 44.000 0.00 0.00 39.71 3.16
530 531 4.630069 CGTCATCGAAATTACCCTTCAAGT 59.370 41.667 0.00 0.00 39.71 3.16
531 532 4.034048 CCGTCATCGAAATTACCCTTCAAG 59.966 45.833 0.00 0.00 39.71 3.02
532 533 3.936453 CCGTCATCGAAATTACCCTTCAA 59.064 43.478 0.00 0.00 39.71 2.69
533 534 3.055675 ACCGTCATCGAAATTACCCTTCA 60.056 43.478 0.00 0.00 39.71 3.02
534 535 3.308866 CACCGTCATCGAAATTACCCTTC 59.691 47.826 0.00 0.00 39.71 3.46
535 536 3.055675 TCACCGTCATCGAAATTACCCTT 60.056 43.478 0.00 0.00 39.71 3.95
536 537 2.498481 TCACCGTCATCGAAATTACCCT 59.502 45.455 0.00 0.00 39.71 4.34
537 538 2.896168 TCACCGTCATCGAAATTACCC 58.104 47.619 0.00 0.00 39.71 3.69
538 539 3.063045 GGTTCACCGTCATCGAAATTACC 59.937 47.826 0.00 0.00 39.71 2.85
539 540 3.063045 GGGTTCACCGTCATCGAAATTAC 59.937 47.826 0.00 0.00 39.71 1.89
540 541 3.264104 GGGTTCACCGTCATCGAAATTA 58.736 45.455 0.00 0.00 39.71 1.40
541 542 2.081462 GGGTTCACCGTCATCGAAATT 58.919 47.619 0.00 0.00 39.71 1.82
542 543 1.734163 GGGTTCACCGTCATCGAAAT 58.266 50.000 0.00 0.00 39.71 2.17
543 544 3.220447 GGGTTCACCGTCATCGAAA 57.780 52.632 0.00 0.00 39.71 3.46
553 554 2.686816 CGCATTGGTCGGGTTCACC 61.687 63.158 0.00 0.00 0.00 4.02
554 555 1.964373 ACGCATTGGTCGGGTTCAC 60.964 57.895 0.00 0.00 0.00 3.18
555 556 1.963855 CACGCATTGGTCGGGTTCA 60.964 57.895 0.00 0.00 0.00 3.18
556 557 2.867472 CACGCATTGGTCGGGTTC 59.133 61.111 0.00 0.00 0.00 3.62
557 558 3.361977 GCACGCATTGGTCGGGTT 61.362 61.111 0.00 0.00 32.06 4.11
558 559 3.842925 AAGCACGCATTGGTCGGGT 62.843 57.895 0.00 0.00 33.68 5.28
559 560 1.302383 TAAAGCACGCATTGGTCGGG 61.302 55.000 0.00 0.00 33.68 5.14
560 561 0.732571 ATAAAGCACGCATTGGTCGG 59.267 50.000 0.00 0.00 33.68 4.79
561 562 2.542766 AATAAAGCACGCATTGGTCG 57.457 45.000 0.00 0.00 33.68 4.79
562 563 4.616181 ACTAATAAAGCACGCATTGGTC 57.384 40.909 0.00 0.00 33.68 4.02
563 564 4.334481 GGTACTAATAAAGCACGCATTGGT 59.666 41.667 0.00 0.00 37.63 3.67
564 565 4.334203 TGGTACTAATAAAGCACGCATTGG 59.666 41.667 0.00 0.00 0.00 3.16
565 566 5.478233 TGGTACTAATAAAGCACGCATTG 57.522 39.130 0.00 0.00 0.00 2.82
566 567 6.055588 AGATGGTACTAATAAAGCACGCATT 58.944 36.000 0.00 0.00 0.00 3.56
567 568 5.611374 AGATGGTACTAATAAAGCACGCAT 58.389 37.500 0.00 0.00 0.00 4.73
568 569 5.018539 AGATGGTACTAATAAAGCACGCA 57.981 39.130 0.00 0.00 0.00 5.24
569 570 4.148348 CGAGATGGTACTAATAAAGCACGC 59.852 45.833 0.00 0.00 0.00 5.34
570 571 5.279384 ACGAGATGGTACTAATAAAGCACG 58.721 41.667 0.00 0.00 0.00 5.34
571 572 7.535489 AAACGAGATGGTACTAATAAAGCAC 57.465 36.000 0.00 0.00 0.00 4.40
609 610 6.740110 ACGCTTTTACAATTTGTATGGACAA 58.260 32.000 9.95 0.00 43.94 3.18
610 611 6.320494 ACGCTTTTACAATTTGTATGGACA 57.680 33.333 9.95 0.00 32.20 4.02
611 612 8.905103 AATACGCTTTTACAATTTGTATGGAC 57.095 30.769 9.95 1.26 32.20 4.02
621 622 9.764363 TCTCATCTCATAATACGCTTTTACAAT 57.236 29.630 0.00 0.00 0.00 2.71
622 623 9.594478 TTCTCATCTCATAATACGCTTTTACAA 57.406 29.630 0.00 0.00 0.00 2.41
623 624 9.249457 CTTCTCATCTCATAATACGCTTTTACA 57.751 33.333 0.00 0.00 0.00 2.41
624 625 9.464714 TCTTCTCATCTCATAATACGCTTTTAC 57.535 33.333 0.00 0.00 0.00 2.01
626 627 8.948631 TTCTTCTCATCTCATAATACGCTTTT 57.051 30.769 0.00 0.00 0.00 2.27
627 628 8.948631 TTTCTTCTCATCTCATAATACGCTTT 57.051 30.769 0.00 0.00 0.00 3.51
628 629 9.202273 GATTTCTTCTCATCTCATAATACGCTT 57.798 33.333 0.00 0.00 0.00 4.68
629 630 7.540400 CGATTTCTTCTCATCTCATAATACGCT 59.460 37.037 0.00 0.00 0.00 5.07
630 631 7.661859 CGATTTCTTCTCATCTCATAATACGC 58.338 38.462 0.00 0.00 0.00 4.42
631 632 7.327032 TGCGATTTCTTCTCATCTCATAATACG 59.673 37.037 0.00 0.00 0.00 3.06
632 633 8.526218 TGCGATTTCTTCTCATCTCATAATAC 57.474 34.615 0.00 0.00 0.00 1.89
633 634 9.716531 AATGCGATTTCTTCTCATCTCATAATA 57.283 29.630 0.00 0.00 28.41 0.98
634 635 8.504815 CAATGCGATTTCTTCTCATCTCATAAT 58.495 33.333 0.00 0.00 28.41 1.28
635 636 7.496920 ACAATGCGATTTCTTCTCATCTCATAA 59.503 33.333 0.00 0.00 28.41 1.90
636 637 6.988580 ACAATGCGATTTCTTCTCATCTCATA 59.011 34.615 0.00 0.00 28.41 2.15
637 638 5.821470 ACAATGCGATTTCTTCTCATCTCAT 59.179 36.000 0.00 0.00 28.41 2.90
638 639 5.064325 CACAATGCGATTTCTTCTCATCTCA 59.936 40.000 0.00 0.00 28.41 3.27
639 640 5.292834 TCACAATGCGATTTCTTCTCATCTC 59.707 40.000 0.00 0.00 28.41 2.75
640 641 5.181009 TCACAATGCGATTTCTTCTCATCT 58.819 37.500 0.00 0.00 28.41 2.90
641 642 5.475273 TCACAATGCGATTTCTTCTCATC 57.525 39.130 0.00 0.00 28.41 2.92
642 643 5.220989 CCATCACAATGCGATTTCTTCTCAT 60.221 40.000 0.00 0.00 31.05 2.90
643 644 4.095334 CCATCACAATGCGATTTCTTCTCA 59.905 41.667 0.00 0.00 0.00 3.27
644 645 4.095483 ACCATCACAATGCGATTTCTTCTC 59.905 41.667 0.00 0.00 0.00 2.87
645 646 4.012374 ACCATCACAATGCGATTTCTTCT 58.988 39.130 0.00 0.00 0.00 2.85
646 647 4.100529 CACCATCACAATGCGATTTCTTC 58.899 43.478 0.00 0.00 0.00 2.87
647 648 3.758023 TCACCATCACAATGCGATTTCTT 59.242 39.130 0.00 0.00 0.00 2.52
648 649 3.346315 TCACCATCACAATGCGATTTCT 58.654 40.909 0.00 0.00 0.00 2.52
649 650 3.763097 TCACCATCACAATGCGATTTC 57.237 42.857 0.00 0.00 0.00 2.17
650 651 4.440525 GGATTCACCATCACAATGCGATTT 60.441 41.667 0.00 0.00 38.79 2.17
651 652 3.067180 GGATTCACCATCACAATGCGATT 59.933 43.478 0.00 0.00 38.79 3.34
652 653 2.620115 GGATTCACCATCACAATGCGAT 59.380 45.455 0.00 0.00 38.79 4.58
653 654 2.016318 GGATTCACCATCACAATGCGA 58.984 47.619 0.00 0.00 38.79 5.10
654 655 1.268184 CGGATTCACCATCACAATGCG 60.268 52.381 0.00 0.00 38.90 4.73
655 656 1.066002 CCGGATTCACCATCACAATGC 59.934 52.381 0.00 0.00 38.90 3.56
656 657 2.615447 CTCCGGATTCACCATCACAATG 59.385 50.000 3.57 0.00 38.90 2.82
657 658 2.505407 TCTCCGGATTCACCATCACAAT 59.495 45.455 3.57 0.00 38.90 2.71
658 659 1.905894 TCTCCGGATTCACCATCACAA 59.094 47.619 3.57 0.00 38.90 3.33
659 660 1.207089 GTCTCCGGATTCACCATCACA 59.793 52.381 3.57 0.00 38.90 3.58
660 661 1.473434 GGTCTCCGGATTCACCATCAC 60.473 57.143 18.31 0.94 38.90 3.06
661 662 0.830648 GGTCTCCGGATTCACCATCA 59.169 55.000 18.31 0.00 38.90 3.07
662 663 0.106894 GGGTCTCCGGATTCACCATC 59.893 60.000 22.54 8.19 38.90 3.51
663 664 0.620410 TGGGTCTCCGGATTCACCAT 60.620 55.000 22.54 0.00 38.90 3.55
664 665 0.838554 TTGGGTCTCCGGATTCACCA 60.839 55.000 22.54 17.54 38.90 4.17
665 666 0.546598 ATTGGGTCTCCGGATTCACC 59.453 55.000 3.57 11.80 35.24 4.02
666 667 1.475213 GGATTGGGTCTCCGGATTCAC 60.475 57.143 3.57 2.50 35.24 3.18
667 668 0.837272 GGATTGGGTCTCCGGATTCA 59.163 55.000 3.57 0.00 35.24 2.57
668 669 3.708013 GGATTGGGTCTCCGGATTC 57.292 57.895 3.57 0.25 35.24 2.52
674 675 0.322546 AAAGCACGGATTGGGTCTCC 60.323 55.000 0.00 0.00 0.00 3.71
675 676 2.396590 TAAAGCACGGATTGGGTCTC 57.603 50.000 0.00 0.00 0.00 3.36
676 677 3.366052 AATAAAGCACGGATTGGGTCT 57.634 42.857 0.00 0.00 0.00 3.85
677 678 5.767816 AATAATAAAGCACGGATTGGGTC 57.232 39.130 0.00 0.00 0.00 4.46
678 679 5.768164 CCTAATAATAAAGCACGGATTGGGT 59.232 40.000 0.00 0.00 0.00 4.51
679 680 5.183140 CCCTAATAATAAAGCACGGATTGGG 59.817 44.000 0.00 0.00 0.00 4.12
680 681 6.001460 TCCCTAATAATAAAGCACGGATTGG 58.999 40.000 0.00 0.00 0.00 3.16
681 682 6.934645 TCTCCCTAATAATAAAGCACGGATTG 59.065 38.462 0.00 0.00 0.00 2.67
682 683 7.016268 TCTCTCCCTAATAATAAAGCACGGATT 59.984 37.037 0.00 0.00 0.00 3.01
683 684 6.497259 TCTCTCCCTAATAATAAAGCACGGAT 59.503 38.462 0.00 0.00 0.00 4.18
684 685 5.836898 TCTCTCCCTAATAATAAAGCACGGA 59.163 40.000 0.00 0.00 0.00 4.69
685 686 6.097915 TCTCTCCCTAATAATAAAGCACGG 57.902 41.667 0.00 0.00 0.00 4.94
686 687 7.062371 CGAATCTCTCCCTAATAATAAAGCACG 59.938 40.741 0.00 0.00 0.00 5.34
687 688 8.088981 TCGAATCTCTCCCTAATAATAAAGCAC 58.911 37.037 0.00 0.00 0.00 4.40
688 689 8.190326 TCGAATCTCTCCCTAATAATAAAGCA 57.810 34.615 0.00 0.00 0.00 3.91
689 690 9.308318 GATCGAATCTCTCCCTAATAATAAAGC 57.692 37.037 0.00 0.00 0.00 3.51
690 691 9.509855 CGATCGAATCTCTCCCTAATAATAAAG 57.490 37.037 10.26 0.00 0.00 1.85
691 692 9.239551 TCGATCGAATCTCTCCCTAATAATAAA 57.760 33.333 16.99 0.00 0.00 1.40
692 693 8.803397 TCGATCGAATCTCTCCCTAATAATAA 57.197 34.615 16.99 0.00 0.00 1.40
693 694 8.982091 ATCGATCGAATCTCTCCCTAATAATA 57.018 34.615 23.50 0.00 0.00 0.98
694 695 7.777910 AGATCGATCGAATCTCTCCCTAATAAT 59.222 37.037 23.50 0.00 0.00 1.28
695 696 7.113437 AGATCGATCGAATCTCTCCCTAATAA 58.887 38.462 23.50 0.00 0.00 1.40
696 697 6.654959 AGATCGATCGAATCTCTCCCTAATA 58.345 40.000 23.50 0.00 0.00 0.98
697 698 5.505780 AGATCGATCGAATCTCTCCCTAAT 58.494 41.667 23.50 0.00 0.00 1.73
698 699 4.912586 AGATCGATCGAATCTCTCCCTAA 58.087 43.478 23.50 0.00 0.00 2.69
699 700 4.224147 AGAGATCGATCGAATCTCTCCCTA 59.776 45.833 32.03 9.72 45.63 3.53
700 701 3.009033 AGAGATCGATCGAATCTCTCCCT 59.991 47.826 32.03 20.09 45.63 4.20
701 702 3.343617 AGAGATCGATCGAATCTCTCCC 58.656 50.000 32.03 18.65 45.63 4.30
744 745 0.610232 GCCTCCAACAAGCCATCAGT 60.610 55.000 0.00 0.00 0.00 3.41
823 825 2.147315 GAGTGCCGAGTGCTGACAGA 62.147 60.000 6.65 0.00 42.00 3.41
841 843 0.178068 GGCCAAGAGATAAGCACCGA 59.822 55.000 0.00 0.00 0.00 4.69
842 844 0.179000 AGGCCAAGAGATAAGCACCG 59.821 55.000 5.01 0.00 0.00 4.94
843 845 2.426842 AAGGCCAAGAGATAAGCACC 57.573 50.000 5.01 0.00 0.00 5.01
845 847 4.018960 AGAGAAAAGGCCAAGAGATAAGCA 60.019 41.667 5.01 0.00 0.00 3.91
846 848 4.522114 AGAGAAAAGGCCAAGAGATAAGC 58.478 43.478 5.01 0.00 0.00 3.09
849 851 4.848357 CCAAGAGAAAAGGCCAAGAGATA 58.152 43.478 5.01 0.00 0.00 1.98
853 855 1.620822 GCCAAGAGAAAAGGCCAAGA 58.379 50.000 5.01 0.00 42.58 3.02
909 921 2.747436 TGGATCGATCGCTGAATGAAG 58.253 47.619 18.81 0.00 0.00 3.02
1156 1248 5.147767 AGAAACAAGGGAATTATATGCCCC 58.852 41.667 0.00 0.00 43.08 5.80
1183 1275 2.615447 AGCACACACAACATGTCAAGAG 59.385 45.455 0.00 0.00 40.64 2.85
1357 1706 2.042537 AGCGAGGAGATGGGCAGA 60.043 61.111 0.00 0.00 0.00 4.26
1394 1743 2.438614 CTCCTGCTCCGTCTCCGA 60.439 66.667 0.00 0.00 35.63 4.55
1396 1745 3.071206 TGCTCCTGCTCCGTCTCC 61.071 66.667 0.00 0.00 40.48 3.71
1397 1746 2.493973 CTGCTCCTGCTCCGTCTC 59.506 66.667 0.00 0.00 40.48 3.36
1398 1747 3.073735 CCTGCTCCTGCTCCGTCT 61.074 66.667 0.00 0.00 40.48 4.18
1421 1770 1.885388 CGTTGCGGTGGTGACTCAA 60.885 57.895 0.00 0.00 0.00 3.02
1422 1771 2.279851 CGTTGCGGTGGTGACTCA 60.280 61.111 0.00 0.00 0.00 3.41
1425 1780 3.698463 CGTCGTTGCGGTGGTGAC 61.698 66.667 0.00 0.00 0.00 3.67
1428 1783 4.955774 GGTCGTCGTTGCGGTGGT 62.956 66.667 0.00 0.00 0.00 4.16
1456 1811 7.138736 CCATCAATCAAAACTACTCGTGTTTT 58.861 34.615 0.00 0.00 45.09 2.43
1457 1812 6.262273 ACCATCAATCAAAACTACTCGTGTTT 59.738 34.615 0.00 0.00 39.03 2.83
1469 1824 9.300681 AGAAGAGAATACAACCATCAATCAAAA 57.699 29.630 0.00 0.00 0.00 2.44
1556 1914 9.787435 ATGTATGTAGGAGAAAAACACTTTGTA 57.213 29.630 0.00 0.00 0.00 2.41
1557 1915 8.691661 ATGTATGTAGGAGAAAAACACTTTGT 57.308 30.769 0.00 0.00 0.00 2.83
1595 1957 6.166982 AGTGACCTTGTATGAGAAAGCTAAC 58.833 40.000 0.00 0.00 0.00 2.34
1645 2063 4.226168 TGGCTTTTCCCCTCAAAAGAAAAA 59.774 37.500 9.37 0.00 43.41 1.94
1647 2065 3.133901 GTGGCTTTTCCCCTCAAAAGAAA 59.866 43.478 9.37 0.00 43.41 2.52
1650 2068 2.319844 AGTGGCTTTTCCCCTCAAAAG 58.680 47.619 1.98 1.98 43.52 2.27
1655 2073 4.086457 TCAATAAAGTGGCTTTTCCCCTC 58.914 43.478 0.00 0.00 35.21 4.30
1690 2108 2.687935 CCCAATTTGTATCCCACCTTCG 59.312 50.000 0.00 0.00 0.00 3.79
1702 2120 0.899717 AGCCGCATGACCCAATTTGT 60.900 50.000 0.00 0.00 0.00 2.83
1703 2121 0.458889 CAGCCGCATGACCCAATTTG 60.459 55.000 0.00 0.00 0.00 2.32
1704 2122 1.606885 CCAGCCGCATGACCCAATTT 61.607 55.000 0.00 0.00 0.00 1.82
1705 2123 2.053865 CCAGCCGCATGACCCAATT 61.054 57.895 0.00 0.00 0.00 2.32
1706 2124 2.440796 CCAGCCGCATGACCCAAT 60.441 61.111 0.00 0.00 0.00 3.16
1727 2145 0.679960 GGGGCGTCAAGTATGGCTTT 60.680 55.000 0.00 0.00 39.59 3.51
1728 2146 1.077716 GGGGCGTCAAGTATGGCTT 60.078 57.895 0.00 0.00 39.59 4.35
1737 2155 0.895530 CTCTAGTTCAGGGGCGTCAA 59.104 55.000 0.00 0.00 0.00 3.18
1781 2199 3.361940 GCGTGCTGTAAATTTTGAAGCTC 59.638 43.478 15.94 12.71 34.92 4.09
1798 2216 0.383949 TTCACTTTTGAAGGGCGTGC 59.616 50.000 0.00 0.00 36.79 5.34
1840 2258 8.717717 ACATGGAGTGGATCTCATTTAATCTAA 58.282 33.333 0.00 0.00 44.40 2.10
1843 2261 7.199541 CACATGGAGTGGATCTCATTTAATC 57.800 40.000 0.00 0.00 44.69 1.75
1877 2295 4.710375 AGGAGCCGACAGAGTTTTAATAGA 59.290 41.667 0.00 0.00 0.00 1.98
1890 2308 1.264749 AACCATAGCAGGAGCCGACA 61.265 55.000 0.00 0.00 43.56 4.35
1907 2325 4.201920 GGAGGAGACAACAAACTCAACAAC 60.202 45.833 0.00 0.00 35.17 3.32
1928 2346 3.369052 GGATCCAACACGTTACATGAGGA 60.369 47.826 6.95 0.93 32.31 3.71
1966 2384 1.352017 TCTGCTGAGAATTCTTGGGCA 59.648 47.619 21.12 21.12 0.00 5.36
1993 2411 1.186200 CACATGAGGAGGACGAGGAA 58.814 55.000 0.00 0.00 0.00 3.36
2033 2451 2.171237 TCCAGTGCCTTACATGATGAGG 59.829 50.000 0.00 4.54 37.13 3.86
2072 2490 1.884926 CGAAGGAGAATGCCTCGGC 60.885 63.158 0.00 0.00 42.89 5.54
2084 2502 0.902531 GGAGATGACCCAACGAAGGA 59.097 55.000 0.00 0.00 0.00 3.36
2182 2600 2.375174 ACCTTGCTTCCATAGACCACAA 59.625 45.455 0.00 0.00 0.00 3.33
2259 2677 3.254166 GCTGAAATGGGATTGTATGCGAT 59.746 43.478 0.00 0.00 0.00 4.58
2268 2686 0.753111 GGCCTCGCTGAAATGGGATT 60.753 55.000 0.00 0.00 0.00 3.01
2307 2725 3.054065 GGGTCAATCAAATCCTCCTCACT 60.054 47.826 0.00 0.00 0.00 3.41
2319 2737 9.974980 GTCTATAAAAACAAAAGGGTCAATCAA 57.025 29.630 0.00 0.00 0.00 2.57
2380 2798 1.781786 TCTCTCTACCCCACATCTGC 58.218 55.000 0.00 0.00 0.00 4.26
2419 2837 6.655848 TGATACAATGTTTACAAGGGGTGTAC 59.344 38.462 0.00 0.00 42.56 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.