Multiple sequence alignment - TraesCS2B01G580100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G580100 chr2B 100.000 9737 0 0 1 9737 767767311 767777047 0.000000e+00 17981.0
1 TraesCS2B01G580100 chr2B 93.363 1823 120 1 7001 8823 767891261 767893082 0.000000e+00 2695.0
2 TraesCS2B01G580100 chr2B 84.841 2144 298 21 6609 8741 768052763 768054890 0.000000e+00 2134.0
3 TraesCS2B01G580100 chr2B 92.429 1017 60 3 592 1602 767934215 767933210 0.000000e+00 1435.0
4 TraesCS2B01G580100 chr2B 90.921 760 59 9 1 754 767760008 767760763 0.000000e+00 1013.0
5 TraesCS2B01G580100 chr2B 85.948 733 56 13 873 1603 767889830 767890517 0.000000e+00 739.0
6 TraesCS2B01G580100 chr2B 92.784 485 25 3 6515 6999 767890511 767890985 0.000000e+00 693.0
7 TraesCS2B01G580100 chr2B 89.201 463 39 4 752 1214 767760842 767761293 1.420000e-157 568.0
8 TraesCS2B01G580100 chr2B 84.615 273 38 4 1 271 36029732 36029462 1.610000e-67 268.0
9 TraesCS2B01G580100 chr2B 95.556 135 5 1 1598 1731 708240683 708240549 2.130000e-51 215.0
10 TraesCS2B01G580100 chr2B 79.518 332 28 19 5604 5896 3510863 3511193 5.960000e-47 200.0
11 TraesCS2B01G580100 chr2B 81.522 184 15 9 3619 3795 510203090 510203261 6.140000e-27 134.0
12 TraesCS2B01G580100 chr2B 97.143 35 0 1 6483 6517 16202000 16201967 3.800000e-04 58.4
13 TraesCS2B01G580100 chr7D 91.523 2949 139 38 1810 4696 367190763 367187864 0.000000e+00 3958.0
14 TraesCS2B01G580100 chr7D 83.036 336 30 16 4378 4697 114482514 114482190 7.450000e-71 279.0
15 TraesCS2B01G580100 chr7D 86.008 243 30 4 1 241 577929541 577929781 3.490000e-64 257.0
16 TraesCS2B01G580100 chr7D 95.349 129 6 0 5907 6035 143736 143608 1.280000e-48 206.0
17 TraesCS2B01G580100 chr7D 91.781 146 11 1 1586 1731 139065886 139065742 1.660000e-47 202.0
18 TraesCS2B01G580100 chr7D 95.789 95 4 0 5604 5698 18125253 18125159 4.710000e-33 154.0
19 TraesCS2B01G580100 chr7D 85.542 83 12 0 273 355 536154851 536154769 4.840000e-13 87.9
20 TraesCS2B01G580100 chr3D 91.478 2922 121 43 1840 4697 121263381 121266238 0.000000e+00 3899.0
21 TraesCS2B01G580100 chr3D 94.404 679 27 7 4021 4697 121331524 121332193 0.000000e+00 1033.0
22 TraesCS2B01G580100 chr3D 93.478 138 9 0 1594 1731 410670056 410670193 1.280000e-48 206.0
23 TraesCS2B01G580100 chr3D 92.248 129 10 0 5907 6035 589022812 589022940 6.010000e-42 183.0
24 TraesCS2B01G580100 chr3D 97.895 95 2 0 5604 5698 404559720 404559626 2.180000e-36 165.0
25 TraesCS2B01G580100 chr3D 95.506 89 4 0 4697 4785 42476252 42476340 1.020000e-29 143.0
26 TraesCS2B01G580100 chr3D 89.474 57 3 3 3879 3935 554843564 554843511 1.750000e-07 69.4
27 TraesCS2B01G580100 chr3D 97.368 38 1 0 6488 6525 91710899 91710936 2.270000e-06 65.8
28 TraesCS2B01G580100 chr2D 93.368 2277 133 11 6536 8808 626170815 626173077 0.000000e+00 3352.0
29 TraesCS2B01G580100 chr2D 93.060 1830 124 2 7001 8828 626424785 626422957 0.000000e+00 2673.0
30 TraesCS2B01G580100 chr2D 84.781 2142 300 18 6609 8740 626587314 626589439 0.000000e+00 2126.0
31 TraesCS2B01G580100 chr2D 84.786 1801 255 8 7001 8795 626386238 626388025 0.000000e+00 1790.0
32 TraesCS2B01G580100 chr2D 85.910 731 73 8 873 1603 626426036 626425336 0.000000e+00 752.0
33 TraesCS2B01G580100 chr2D 91.102 472 31 7 6531 7002 626425331 626424871 6.420000e-176 628.0
34 TraesCS2B01G580100 chr2D 88.981 481 39 4 758 1235 626169377 626169846 5.070000e-162 582.0
35 TraesCS2B01G580100 chr2D 89.051 411 30 9 353 754 626139488 626139892 6.790000e-136 496.0
36 TraesCS2B01G580100 chr2D 94.099 322 19 0 1274 1595 626170466 626170787 3.160000e-134 490.0
37 TraesCS2B01G580100 chr2D 89.113 248 25 2 3982 4228 539573510 539573756 3.420000e-79 307.0
38 TraesCS2B01G580100 chr2D 95.420 131 6 0 1601 1731 445733832 445733702 9.910000e-50 209.0
39 TraesCS2B01G580100 chr2D 92.308 91 7 0 4697 4787 628786583 628786673 7.940000e-26 130.0
40 TraesCS2B01G580100 chr2D 79.769 173 10 13 353 514 626432283 626432125 1.730000e-17 102.0
41 TraesCS2B01G580100 chr2D 100.000 30 0 0 6488 6517 317588418 317588389 1.000000e-03 56.5
42 TraesCS2B01G580100 chr3A 90.583 2538 154 30 1761 4238 656203004 656200492 0.000000e+00 3284.0
43 TraesCS2B01G580100 chr3A 99.051 1792 15 2 4697 6487 184657189 184655399 0.000000e+00 3214.0
44 TraesCS2B01G580100 chr3A 98.227 1297 21 2 4769 6065 184653564 184652270 0.000000e+00 2266.0
45 TraesCS2B01G580100 chr3A 97.892 427 9 0 6061 6487 184641468 184641042 0.000000e+00 739.0
46 TraesCS2B01G580100 chr3A 94.904 471 21 3 4226 4695 656200558 656200090 0.000000e+00 734.0
47 TraesCS2B01G580100 chr3A 85.912 433 36 8 4794 5208 459375416 459375841 1.160000e-118 438.0
48 TraesCS2B01G580100 chr3A 95.604 91 4 0 4699 4789 184653813 184653723 7.880000e-31 147.0
49 TraesCS2B01G580100 chr5B 90.527 2544 142 37 1761 4238 487461150 487458640 0.000000e+00 3271.0
50 TraesCS2B01G580100 chr5B 94.647 467 22 3 4226 4691 487458706 487458242 0.000000e+00 721.0
51 TraesCS2B01G580100 chr5B 84.314 357 38 12 4357 4696 426649828 426649473 5.640000e-87 333.0
52 TraesCS2B01G580100 chr5B 89.441 161 15 2 1573 1731 595395295 595395455 1.660000e-47 202.0
53 TraesCS2B01G580100 chr2A 92.770 1812 126 4 7001 8808 756370379 756368569 0.000000e+00 2615.0
54 TraesCS2B01G580100 chr2A 93.123 1774 122 0 7001 8774 756133220 756131447 0.000000e+00 2601.0
55 TraesCS2B01G580100 chr2A 83.851 1963 285 24 6818 8766 757332320 757334264 0.000000e+00 1840.0
56 TraesCS2B01G580100 chr2A 84.034 1785 264 11 7001 8778 756029335 756031105 0.000000e+00 1698.0
57 TraesCS2B01G580100 chr2A 84.034 1785 264 11 7001 8778 757001783 757000013 0.000000e+00 1698.0
58 TraesCS2B01G580100 chr2A 82.118 850 140 9 8895 9737 186472541 186471697 0.000000e+00 717.0
59 TraesCS2B01G580100 chr2A 94.433 467 13 7 6536 7002 756370919 756370466 0.000000e+00 706.0
60 TraesCS2B01G580100 chr2A 84.499 729 78 6 875 1603 756134569 756133876 0.000000e+00 688.0
61 TraesCS2B01G580100 chr2A 93.079 419 24 3 6584 7002 756133824 756133411 8.360000e-170 608.0
62 TraesCS2B01G580100 chr2A 89.605 481 37 3 761 1238 756372090 756371620 5.030000e-167 599.0
63 TraesCS2B01G580100 chr2A 97.068 307 9 0 6061 6367 514505559 514505253 1.450000e-142 518.0
64 TraesCS2B01G580100 chr2A 96.753 308 10 0 6061 6368 606503710 606503403 1.880000e-141 514.0
65 TraesCS2B01G580100 chr2A 96.417 307 11 0 6061 6367 73688809 73689115 3.140000e-139 507.0
66 TraesCS2B01G580100 chr2A 95.000 320 16 0 1276 1595 756371266 756370947 4.060000e-138 503.0
67 TraesCS2B01G580100 chr2A 89.268 410 26 8 353 753 756372735 756372335 1.890000e-136 497.0
68 TraesCS2B01G580100 chr2A 85.654 237 19 7 4794 5023 369509814 369509586 1.630000e-57 235.0
69 TraesCS2B01G580100 chr2A 80.872 298 57 0 1305 1602 757371531 757371234 1.630000e-57 235.0
70 TraesCS2B01G580100 chr2A 88.889 162 17 1 4472 4632 729668860 729669021 2.150000e-46 198.0
71 TraesCS2B01G580100 chr2A 90.698 129 12 0 5907 6035 178159565 178159693 1.300000e-38 172.0
72 TraesCS2B01G580100 chr2A 96.703 91 3 0 4697 4787 713222644 713222734 1.690000e-32 152.0
73 TraesCS2B01G580100 chr2A 95.122 41 1 1 8788 8828 756131270 756131231 8.160000e-06 63.9
74 TraesCS2B01G580100 chr2A 100.000 30 0 0 6488 6517 416924091 416924120 1.000000e-03 56.5
75 TraesCS2B01G580100 chr6D 94.118 1666 83 9 3036 4697 385711240 385709586 0.000000e+00 2519.0
76 TraesCS2B01G580100 chr6D 89.848 1320 62 20 1783 3047 385715440 385714138 0.000000e+00 1629.0
77 TraesCS2B01G580100 chr6D 89.516 248 24 2 3982 4228 443289694 443289448 7.340000e-81 313.0
78 TraesCS2B01G580100 chr6D 80.654 367 53 10 1 351 33335743 33335379 1.610000e-67 268.0
79 TraesCS2B01G580100 chr6D 84.496 258 36 2 1 257 407474805 407475059 1.620000e-62 252.0
80 TraesCS2B01G580100 chr6D 79.630 270 29 17 4222 4486 443289508 443289260 4.680000e-38 171.0
81 TraesCS2B01G580100 chr5A 98.026 1368 25 2 4698 6065 648944227 648945592 0.000000e+00 2375.0
82 TraesCS2B01G580100 chr5A 83.176 850 130 11 8895 9737 429992022 429991179 0.000000e+00 765.0
83 TraesCS2B01G580100 chr5A 97.521 121 2 1 6368 6487 648949616 648949736 1.280000e-48 206.0
84 TraesCS2B01G580100 chr6B 95.097 1285 57 6 3044 4322 11435466 11434182 0.000000e+00 2019.0
85 TraesCS2B01G580100 chr6B 91.607 1251 50 18 1851 3055 11436952 11435711 0.000000e+00 1677.0
86 TraesCS2B01G580100 chr6B 95.268 634 17 9 8894 9522 719774235 719773610 0.000000e+00 992.0
87 TraesCS2B01G580100 chr6B 94.737 152 5 3 1731 1880 463395133 463395283 5.880000e-57 233.0
88 TraesCS2B01G580100 chr6B 94.074 135 8 0 1597 1731 699977445 699977579 1.280000e-48 206.0
89 TraesCS2B01G580100 chr6B 95.789 95 4 0 5604 5698 64111185 64111091 4.710000e-33 154.0
90 TraesCS2B01G580100 chr6B 97.727 88 2 0 4613 4700 11433065 11432978 1.690000e-32 152.0
91 TraesCS2B01G580100 chrUn 84.034 1785 264 11 7001 8778 180890499 180892269 0.000000e+00 1698.0
92 TraesCS2B01G580100 chrUn 85.279 394 58 0 6609 7002 180890025 180890418 3.270000e-109 407.0
93 TraesCS2B01G580100 chr1B 94.556 845 42 4 8896 9737 593237971 593238814 0.000000e+00 1303.0
94 TraesCS2B01G580100 chr1B 88.208 424 32 9 4794 5208 267009792 267009378 3.160000e-134 490.0
95 TraesCS2B01G580100 chr1B 83.130 409 56 11 1933 2335 502381559 502381158 2.590000e-95 361.0
96 TraesCS2B01G580100 chr1B 95.070 142 5 2 1740 1880 559585017 559584877 1.270000e-53 222.0
97 TraesCS2B01G580100 chr6A 91.736 847 66 4 8893 9737 10506555 10505711 0.000000e+00 1173.0
98 TraesCS2B01G580100 chr6A 98.046 307 6 0 6061 6367 302548534 302548840 1.440000e-147 534.0
99 TraesCS2B01G580100 chr6A 81.278 673 89 24 4797 5452 234100102 234100754 2.430000e-140 510.0
100 TraesCS2B01G580100 chr6A 87.459 303 34 4 2033 2333 180193584 180193284 7.240000e-91 346.0
101 TraesCS2B01G580100 chr6A 90.638 235 21 1 5464 5698 234139546 234139779 2.640000e-80 311.0
102 TraesCS2B01G580100 chr6A 84.343 198 28 3 1730 1926 180193874 180193679 3.590000e-44 191.0
103 TraesCS2B01G580100 chr6A 91.200 125 9 2 6364 6488 541101638 541101516 1.680000e-37 169.0
104 TraesCS2B01G580100 chr6A 94.505 91 5 0 4697 4787 240388610 240388520 3.670000e-29 141.0
105 TraesCS2B01G580100 chr6A 94.286 35 2 0 6488 6522 301082396 301082362 5.000000e-03 54.7
106 TraesCS2B01G580100 chr4A 90.437 847 79 2 8893 9737 692068973 692068127 0.000000e+00 1114.0
107 TraesCS2B01G580100 chr4A 95.268 317 14 1 6061 6377 138461783 138461468 1.460000e-137 501.0
108 TraesCS2B01G580100 chr4A 88.356 292 31 3 2033 2323 712005403 712005692 2.010000e-91 348.0
109 TraesCS2B01G580100 chr4A 94.815 135 7 0 1598 1732 735663905 735664039 2.760000e-50 211.0
110 TraesCS2B01G580100 chr4A 92.308 91 7 0 4697 4787 241032077 241031987 7.940000e-26 130.0
111 TraesCS2B01G580100 chr3B 94.313 633 34 2 8950 9580 17109715 17110347 0.000000e+00 968.0
112 TraesCS2B01G580100 chr3B 85.401 274 36 4 1 271 583633887 583634159 2.070000e-71 281.0
113 TraesCS2B01G580100 chr3B 79.333 300 24 17 5604 5865 478042378 478042079 1.010000e-39 176.0
114 TraesCS2B01G580100 chr5D 91.483 681 41 8 4794 5462 139281789 139282464 0.000000e+00 920.0
115 TraesCS2B01G580100 chr5D 93.473 383 14 2 5683 6065 170400089 170399718 8.540000e-155 558.0
116 TraesCS2B01G580100 chr5D 81.543 363 55 8 1 353 491288935 491289295 1.240000e-73 289.0
117 TraesCS2B01G580100 chr5D 87.764 237 14 5 4794 5023 12935484 12935256 7.500000e-66 263.0
118 TraesCS2B01G580100 chr5D 82.686 283 45 4 1 280 391863790 391863509 2.100000e-61 248.0
119 TraesCS2B01G580100 chr5D 95.041 121 5 1 6368 6488 170384135 170384016 1.290000e-43 189.0
120 TraesCS2B01G580100 chr5D 94.915 118 5 1 6368 6485 139305616 139305732 6.010000e-42 183.0
121 TraesCS2B01G580100 chr5D 93.220 118 6 2 6368 6485 139300250 139300365 1.300000e-38 172.0
122 TraesCS2B01G580100 chr1D 84.335 849 122 8 8895 9737 22724383 22723540 0.000000e+00 821.0
123 TraesCS2B01G580100 chr1D 90.698 129 12 0 5907 6035 323535851 323535979 1.300000e-38 172.0
124 TraesCS2B01G580100 chr1D 90.123 81 8 0 275 355 234258522 234258442 1.340000e-18 106.0
125 TraesCS2B01G580100 chr7A 83.274 849 127 12 8895 9735 736281314 736280473 0.000000e+00 767.0
126 TraesCS2B01G580100 chr7A 98.697 307 4 0 6061 6367 536955137 536955443 6.650000e-151 545.0
127 TraesCS2B01G580100 chr7A 96.091 307 12 0 6061 6367 50426376 50426070 1.460000e-137 501.0
128 TraesCS2B01G580100 chr7A 81.301 369 50 13 1 354 210816817 210817181 2.070000e-71 281.0
129 TraesCS2B01G580100 chr7A 83.010 206 30 4 1724 1926 412728831 412729034 2.160000e-41 182.0
130 TraesCS2B01G580100 chr7A 91.803 122 9 1 6368 6489 668645626 668645506 1.680000e-37 169.0
131 TraesCS2B01G580100 chr7A 91.803 122 9 1 6368 6489 668648340 668648220 1.680000e-37 169.0
132 TraesCS2B01G580100 chr7B 86.514 393 44 9 6613 7002 627951438 627951824 3.250000e-114 424.0
133 TraesCS2B01G580100 chr7B 82.891 339 31 12 4375 4697 73997899 73997572 7.450000e-71 279.0
134 TraesCS2B01G580100 chr7B 87.342 237 17 5 4794 5023 574463155 574462925 9.700000e-65 259.0
135 TraesCS2B01G580100 chr7B 75.874 286 55 13 1303 1584 627951157 627951432 6.140000e-27 134.0
136 TraesCS2B01G580100 chr7B 81.988 161 16 4 4547 4694 73993190 73993030 3.690000e-24 124.0
137 TraesCS2B01G580100 chr7B 73.924 395 66 16 4231 4620 651143795 651144157 3.690000e-24 124.0
138 TraesCS2B01G580100 chr7B 100.000 33 0 0 6033 6065 59074238 59074206 2.940000e-05 62.1
139 TraesCS2B01G580100 chr1A 95.333 150 5 2 1732 1880 107528483 107528335 4.550000e-58 237.0
140 TraesCS2B01G580100 chr1A 88.350 103 11 1 4699 4801 291679026 291678925 1.330000e-23 122.0
141 TraesCS2B01G580100 chr4B 94.776 134 7 0 1595 1728 41528090 41528223 9.910000e-50 209.0
142 TraesCS2B01G580100 chr4B 95.420 131 6 0 1601 1731 63753841 63753971 9.910000e-50 209.0
143 TraesCS2B01G580100 chr4B 93.798 129 8 0 5907 6035 456372519 456372647 2.770000e-45 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G580100 chr2B 767767311 767777047 9736 False 17981.000000 17981 100.000000 1 9737 1 chr2B.!!$F3 9736
1 TraesCS2B01G580100 chr2B 768052763 768054890 2127 False 2134.000000 2134 84.841000 6609 8741 1 chr2B.!!$F4 2132
2 TraesCS2B01G580100 chr2B 767933210 767934215 1005 True 1435.000000 1435 92.429000 592 1602 1 chr2B.!!$R4 1010
3 TraesCS2B01G580100 chr2B 767889830 767893082 3252 False 1375.666667 2695 90.698333 873 8823 3 chr2B.!!$F6 7950
4 TraesCS2B01G580100 chr2B 767760008 767761293 1285 False 790.500000 1013 90.061000 1 1214 2 chr2B.!!$F5 1213
5 TraesCS2B01G580100 chr7D 367187864 367190763 2899 True 3958.000000 3958 91.523000 1810 4696 1 chr7D.!!$R5 2886
6 TraesCS2B01G580100 chr3D 121263381 121266238 2857 False 3899.000000 3899 91.478000 1840 4697 1 chr3D.!!$F3 2857
7 TraesCS2B01G580100 chr3D 121331524 121332193 669 False 1033.000000 1033 94.404000 4021 4697 1 chr3D.!!$F4 676
8 TraesCS2B01G580100 chr2D 626587314 626589439 2125 False 2126.000000 2126 84.781000 6609 8740 1 chr2D.!!$F4 2131
9 TraesCS2B01G580100 chr2D 626386238 626388025 1787 False 1790.000000 1790 84.786000 7001 8795 1 chr2D.!!$F3 1794
10 TraesCS2B01G580100 chr2D 626169377 626173077 3700 False 1474.666667 3352 92.149333 758 8808 3 chr2D.!!$F6 8050
11 TraesCS2B01G580100 chr2D 626422957 626426036 3079 True 1351.000000 2673 90.024000 873 8828 3 chr2D.!!$R4 7955
12 TraesCS2B01G580100 chr3A 656200090 656203004 2914 True 2009.000000 3284 92.743500 1761 4695 2 chr3A.!!$R3 2934
13 TraesCS2B01G580100 chr3A 184652270 184657189 4919 True 1875.666667 3214 97.627333 4697 6487 3 chr3A.!!$R2 1790
14 TraesCS2B01G580100 chr5B 487458242 487461150 2908 True 1996.000000 3271 92.587000 1761 4691 2 chr5B.!!$R2 2930
15 TraesCS2B01G580100 chr2A 757332320 757334264 1944 False 1840.000000 1840 83.851000 6818 8766 1 chr2A.!!$F7 1948
16 TraesCS2B01G580100 chr2A 756029335 756031105 1770 False 1698.000000 1698 84.034000 7001 8778 1 chr2A.!!$F6 1777
17 TraesCS2B01G580100 chr2A 757000013 757001783 1770 True 1698.000000 1698 84.034000 7001 8778 1 chr2A.!!$R5 1777
18 TraesCS2B01G580100 chr2A 756131231 756134569 3338 True 990.225000 2601 91.455750 875 8828 4 chr2A.!!$R7 7953
19 TraesCS2B01G580100 chr2A 756368569 756372735 4166 True 984.000000 2615 92.215200 353 8808 5 chr2A.!!$R8 8455
20 TraesCS2B01G580100 chr2A 186471697 186472541 844 True 717.000000 717 82.118000 8895 9737 1 chr2A.!!$R1 842
21 TraesCS2B01G580100 chr6D 385709586 385715440 5854 True 2074.000000 2519 91.983000 1783 4697 2 chr6D.!!$R2 2914
22 TraesCS2B01G580100 chr5A 648944227 648945592 1365 False 2375.000000 2375 98.026000 4698 6065 1 chr5A.!!$F1 1367
23 TraesCS2B01G580100 chr5A 429991179 429992022 843 True 765.000000 765 83.176000 8895 9737 1 chr5A.!!$R1 842
24 TraesCS2B01G580100 chr6B 11432978 11436952 3974 True 1282.666667 2019 94.810333 1851 4700 3 chr6B.!!$R3 2849
25 TraesCS2B01G580100 chr6B 719773610 719774235 625 True 992.000000 992 95.268000 8894 9522 1 chr6B.!!$R2 628
26 TraesCS2B01G580100 chrUn 180890025 180892269 2244 False 1052.500000 1698 84.656500 6609 8778 2 chrUn.!!$F1 2169
27 TraesCS2B01G580100 chr1B 593237971 593238814 843 False 1303.000000 1303 94.556000 8896 9737 1 chr1B.!!$F1 841
28 TraesCS2B01G580100 chr6A 10505711 10506555 844 True 1173.000000 1173 91.736000 8893 9737 1 chr6A.!!$R1 844
29 TraesCS2B01G580100 chr6A 234100102 234100754 652 False 510.000000 510 81.278000 4797 5452 1 chr6A.!!$F1 655
30 TraesCS2B01G580100 chr6A 180193284 180193874 590 True 268.500000 346 85.901000 1730 2333 2 chr6A.!!$R5 603
31 TraesCS2B01G580100 chr4A 692068127 692068973 846 True 1114.000000 1114 90.437000 8893 9737 1 chr4A.!!$R3 844
32 TraesCS2B01G580100 chr3B 17109715 17110347 632 False 968.000000 968 94.313000 8950 9580 1 chr3B.!!$F1 630
33 TraesCS2B01G580100 chr5D 139281789 139282464 675 False 920.000000 920 91.483000 4794 5462 1 chr5D.!!$F1 668
34 TraesCS2B01G580100 chr1D 22723540 22724383 843 True 821.000000 821 84.335000 8895 9737 1 chr1D.!!$R1 842
35 TraesCS2B01G580100 chr7A 736280473 736281314 841 True 767.000000 767 83.274000 8895 9735 1 chr7A.!!$R2 840
36 TraesCS2B01G580100 chr7B 627951157 627951824 667 False 279.000000 424 81.194000 1303 7002 2 chr7B.!!$F2 5699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 1239 0.034574 ACTCACTTGTGTTGCACCCA 60.035 50.000 0.46 0.0 32.73 4.51 F
1125 1387 0.388907 CAGGGAATTTGCTGTTGGCG 60.389 55.000 0.00 0.0 45.43 5.69 F
2341 3249 0.990818 ATGGAGGAAGAAGGGGAGGC 60.991 60.000 0.00 0.0 0.00 4.70 F
3125 6985 2.170985 CAGCTAACGCGTGTGTGC 59.829 61.111 14.98 15.0 42.32 4.57 F
3556 7427 0.965363 ATCCGCTCGCCAAACCAAAT 60.965 50.000 0.00 0.0 0.00 2.32 F
4519 9363 0.107703 GGCCAAGATCGTCACCATGA 60.108 55.000 0.00 0.0 0.00 3.07 F
6362 14781 0.109919 CGCCTACCGCTTTTTCCAAC 60.110 55.000 0.00 0.0 34.21 3.77 F
6438 14857 0.036164 TAATGGCACGTGGAGCAAGT 59.964 50.000 18.88 0.0 0.00 3.16 F
6482 14901 0.039888 AACGCACGGGCATTTTGTAC 60.040 50.000 11.77 0.0 41.24 2.90 F
6483 14902 0.887387 ACGCACGGGCATTTTGTACT 60.887 50.000 11.77 0.0 41.24 2.73 F
7940 16830 0.889306 GAGCTCTACGTGTGGGAGTT 59.111 55.000 6.43 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1977 2864 0.032017 ACCCCTTCGCTGTCTCCTAT 60.032 55.000 0.00 0.00 0.00 2.57 R
2360 3289 0.701147 CCCCTCCCTTTCTTCAGCTT 59.299 55.000 0.00 0.00 0.00 3.74 R
3384 7249 0.035820 ATTTTAGGCGCCCGTCTGAA 60.036 50.000 26.15 10.26 0.00 3.02 R
4464 9307 1.302832 CCCCTCACACTTGCCACTC 60.303 63.158 0.00 0.00 0.00 3.51 R
5274 13691 1.375908 GTTCGCTGGTGCTCCATGA 60.376 57.895 8.18 6.86 43.43 3.07 R
6419 14838 0.036164 ACTTGCTCCACGTGCCATTA 59.964 50.000 10.91 0.00 0.00 1.90 R
7341 16231 1.078848 GCGTGGGCTCATGAAGTCT 60.079 57.895 10.85 0.00 35.83 3.24 R
7368 16258 1.115930 AGATCTTCCGCGCCCAGTAT 61.116 55.000 0.00 0.00 0.00 2.12 R
8343 17239 1.227823 CACAAGGAGGTGGAACGCA 60.228 57.895 0.00 0.00 43.02 5.24 R
8475 17371 1.811778 TGATGCCCTTGCTATCCTCT 58.188 50.000 0.00 0.00 38.71 3.69 R
8871 17935 2.002505 GCACTAGCCATCCTAGGAGA 57.997 55.000 18.34 0.00 46.44 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.181461 CCAACCAGACCTCTCATACCATC 60.181 52.174 0.00 0.00 0.00 3.51
35 36 4.044317 ACCTCTCATACCATCCCTATACGT 59.956 45.833 0.00 0.00 0.00 3.57
36 37 5.017490 CCTCTCATACCATCCCTATACGTT 58.983 45.833 0.00 0.00 0.00 3.99
43 44 3.181440 ACCATCCCTATACGTTCGGACTA 60.181 47.826 0.00 0.00 0.00 2.59
46 47 3.679389 TCCCTATACGTTCGGACTATCC 58.321 50.000 0.00 0.00 0.00 2.59
72 73 5.410746 CGAACCCTCATATCCATCTCAAATG 59.589 44.000 0.00 0.00 0.00 2.32
80 81 4.989875 ATCCATCTCAAATGTAGGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
84 85 5.782331 TCCATCTCAAATGTAGGGAGGATAG 59.218 44.000 0.00 0.00 0.00 2.08
91 93 1.866943 TGTAGGGAGGATAGGAGGCTT 59.133 52.381 0.00 0.00 0.00 4.35
94 96 0.682292 GGGAGGATAGGAGGCTTTCG 59.318 60.000 0.00 0.00 0.00 3.46
103 105 4.681978 AGGCTTTCGGACGCGCTT 62.682 61.111 5.73 0.00 0.00 4.68
104 106 4.445545 GGCTTTCGGACGCGCTTG 62.446 66.667 5.73 0.00 0.00 4.01
148 150 0.994247 TAGGACACGACCCTACTCCA 59.006 55.000 0.00 0.00 35.30 3.86
154 156 0.611340 ACGACCCTACTCCAGACCAC 60.611 60.000 0.00 0.00 0.00 4.16
162 164 3.055747 CCTACTCCAGACCACCTTTTCTC 60.056 52.174 0.00 0.00 0.00 2.87
202 205 5.574891 TTCTTTCTCTCTCTTCATCTCCG 57.425 43.478 0.00 0.00 0.00 4.63
215 219 0.106708 ATCTCCGCCAATACGTGCAT 59.893 50.000 0.00 0.00 0.00 3.96
225 229 0.464036 ATACGTGCATGTGACCGGAT 59.536 50.000 21.92 2.62 0.00 4.18
244 248 7.745717 ACCGGATATATGAGGAAGAAAATGAA 58.254 34.615 9.46 0.00 0.00 2.57
262 266 1.523095 GAAGACTGTGACTGCGTGAAC 59.477 52.381 0.00 0.00 0.00 3.18
263 267 0.459899 AGACTGTGACTGCGTGAACA 59.540 50.000 0.00 0.00 0.00 3.18
279 283 3.789224 GTGAACAAACAAATGACGGACAC 59.211 43.478 0.00 0.00 0.00 3.67
281 285 1.268335 ACAAACAAATGACGGACACGC 60.268 47.619 0.00 0.00 46.04 5.34
324 328 0.676782 GCAGGCGTTTAGGTGGTCAT 60.677 55.000 0.00 0.00 0.00 3.06
331 335 3.377172 GCGTTTAGGTGGTCATATTTGCT 59.623 43.478 0.00 0.00 0.00 3.91
345 349 2.843401 TTTGCTAAGTCCGGCTGTAA 57.157 45.000 0.00 0.00 0.00 2.41
425 437 3.033909 TCATATCCCCTCACAGTCACAG 58.966 50.000 0.00 0.00 0.00 3.66
433 445 3.600388 CCTCACAGTCACAGTAAATCCC 58.400 50.000 0.00 0.00 0.00 3.85
527 539 6.471519 GCTAAACTCATAGATGCAAAAGCTTG 59.528 38.462 0.00 0.00 35.49 4.01
531 543 5.709164 ACTCATAGATGCAAAAGCTTGACTT 59.291 36.000 0.00 0.00 41.70 3.01
532 544 5.946298 TCATAGATGCAAAAGCTTGACTTG 58.054 37.500 0.00 1.88 39.09 3.16
574 587 5.334879 CGTAGACAATAAATAGCAATGGGGC 60.335 44.000 0.00 0.00 0.00 5.80
629 642 4.097286 TGCAGTTCTACTTTTGTCCCAAAC 59.903 41.667 0.00 0.00 0.00 2.93
643 656 4.885325 TGTCCCAAACCAAACTTCTCTAAC 59.115 41.667 0.00 0.00 0.00 2.34
748 767 6.780706 TGAACTCGGTCAAACTTATTCTTC 57.219 37.500 0.00 0.00 0.00 2.87
806 1065 9.498176 TTCTTTACCATTGTTCTTTAGTACTCC 57.502 33.333 0.00 0.00 0.00 3.85
901 1162 3.649073 AGGCGCACATTTAAAACTTTCC 58.351 40.909 10.83 0.00 0.00 3.13
947 1209 6.255887 AGTCTATATTAAGTTGAGCGTGCAAC 59.744 38.462 12.61 12.61 46.47 4.17
977 1239 0.034574 ACTCACTTGTGTTGCACCCA 60.035 50.000 0.46 0.00 32.73 4.51
978 1240 1.321474 CTCACTTGTGTTGCACCCAT 58.679 50.000 0.46 0.00 32.73 4.00
979 1241 1.682854 CTCACTTGTGTTGCACCCATT 59.317 47.619 0.46 0.00 32.73 3.16
980 1242 2.101249 CTCACTTGTGTTGCACCCATTT 59.899 45.455 0.46 0.00 32.73 2.32
981 1243 2.499289 TCACTTGTGTTGCACCCATTTT 59.501 40.909 0.46 0.00 32.73 1.82
982 1244 3.055530 TCACTTGTGTTGCACCCATTTTT 60.056 39.130 0.46 0.00 32.73 1.94
1121 1383 1.632589 GGGTCAGGGAATTTGCTGTT 58.367 50.000 0.00 0.00 0.00 3.16
1125 1387 0.388907 CAGGGAATTTGCTGTTGGCG 60.389 55.000 0.00 0.00 45.43 5.69
1273 2131 5.321927 TCTTTGAAAAGAGGTACAATCCCC 58.678 41.667 1.31 0.00 39.95 4.81
1462 2320 3.567579 CTTCCTTCCCCGGCAGCAA 62.568 63.158 0.00 0.00 0.00 3.91
1589 2447 2.417719 GCCACACTCGTCTTCAAGAAT 58.582 47.619 0.00 0.00 0.00 2.40
1612 2470 4.639135 GGTACGTAATACTCCCTTCGTT 57.361 45.455 0.00 0.00 33.87 3.85
1613 2471 4.602006 GGTACGTAATACTCCCTTCGTTC 58.398 47.826 0.00 0.00 33.87 3.95
1614 2472 3.790152 ACGTAATACTCCCTTCGTTCC 57.210 47.619 0.00 0.00 0.00 3.62
1615 2473 3.359950 ACGTAATACTCCCTTCGTTCCT 58.640 45.455 0.00 0.00 0.00 3.36
1616 2474 4.526970 ACGTAATACTCCCTTCGTTCCTA 58.473 43.478 0.00 0.00 0.00 2.94
1617 2475 4.949856 ACGTAATACTCCCTTCGTTCCTAA 59.050 41.667 0.00 0.00 0.00 2.69
1618 2476 5.418840 ACGTAATACTCCCTTCGTTCCTAAA 59.581 40.000 0.00 0.00 0.00 1.85
1619 2477 6.097412 ACGTAATACTCCCTTCGTTCCTAAAT 59.903 38.462 0.00 0.00 0.00 1.40
1620 2478 7.285401 ACGTAATACTCCCTTCGTTCCTAAATA 59.715 37.037 0.00 0.00 0.00 1.40
1621 2479 8.302438 CGTAATACTCCCTTCGTTCCTAAATAT 58.698 37.037 0.00 0.00 0.00 1.28
1625 2483 7.672122 ACTCCCTTCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
1626 2484 7.724287 ACTCCCTTCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
1627 2485 7.564292 ACTCCCTTCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
1628 2486 8.315220 TCCCTTCGTTCCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
1629 2487 8.765517 TCCCTTCGTTCCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
1630 2488 8.827677 CCCTTCGTTCCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
1631 2489 8.336080 CCTTCGTTCCTAAATATAAGTCTTTGC 58.664 37.037 0.00 0.00 0.00 3.68
1632 2490 8.780846 TTCGTTCCTAAATATAAGTCTTTGCA 57.219 30.769 0.00 0.00 0.00 4.08
1633 2491 8.420374 TCGTTCCTAAATATAAGTCTTTGCAG 57.580 34.615 0.00 0.00 0.00 4.41
1634 2492 8.255206 TCGTTCCTAAATATAAGTCTTTGCAGA 58.745 33.333 0.00 0.00 0.00 4.26
1635 2493 8.543774 CGTTCCTAAATATAAGTCTTTGCAGAG 58.456 37.037 0.00 0.00 0.00 3.35
1636 2494 9.601217 GTTCCTAAATATAAGTCTTTGCAGAGA 57.399 33.333 2.15 2.15 0.00 3.10
1643 2501 9.678260 AATATAAGTCTTTGCAGAGATTTCACT 57.322 29.630 16.76 4.25 29.76 3.41
1646 2504 6.981762 AGTCTTTGCAGAGATTTCACTATG 57.018 37.500 10.53 0.00 33.03 2.23
1647 2505 6.705302 AGTCTTTGCAGAGATTTCACTATGA 58.295 36.000 10.53 0.00 31.75 2.15
1648 2506 7.164122 AGTCTTTGCAGAGATTTCACTATGAA 58.836 34.615 10.53 0.00 34.03 2.57
1649 2507 7.118971 AGTCTTTGCAGAGATTTCACTATGAAC 59.881 37.037 10.53 0.00 35.89 3.18
1650 2508 6.372659 TCTTTGCAGAGATTTCACTATGAACC 59.627 38.462 2.15 0.00 35.89 3.62
1651 2509 5.164620 TGCAGAGATTTCACTATGAACCA 57.835 39.130 0.00 0.00 35.89 3.67
1652 2510 4.937620 TGCAGAGATTTCACTATGAACCAC 59.062 41.667 0.00 0.00 35.89 4.16
1653 2511 4.937620 GCAGAGATTTCACTATGAACCACA 59.062 41.667 0.00 0.00 35.89 4.17
1654 2512 5.587844 GCAGAGATTTCACTATGAACCACAT 59.412 40.000 0.00 0.00 35.89 3.21
1655 2513 6.457934 GCAGAGATTTCACTATGAACCACATG 60.458 42.308 0.00 0.00 35.89 3.21
1656 2514 5.587844 AGAGATTTCACTATGAACCACATGC 59.412 40.000 0.00 0.00 35.89 4.06
1657 2515 4.333649 AGATTTCACTATGAACCACATGCG 59.666 41.667 0.00 0.00 35.89 4.73
1658 2516 2.022764 TCACTATGAACCACATGCGG 57.977 50.000 0.00 0.00 39.77 5.69
1659 2517 1.552792 TCACTATGAACCACATGCGGA 59.447 47.619 6.80 0.00 39.77 5.54
1660 2518 2.170397 TCACTATGAACCACATGCGGAT 59.830 45.455 6.80 0.00 39.77 4.18
1661 2519 2.288729 CACTATGAACCACATGCGGATG 59.711 50.000 16.07 16.07 39.77 3.51
1662 2520 2.092968 ACTATGAACCACATGCGGATGT 60.093 45.455 17.64 17.64 44.08 3.06
1663 2521 2.708216 ATGAACCACATGCGGATGTA 57.292 45.000 22.75 7.09 41.12 2.29
1664 2522 2.708216 TGAACCACATGCGGATGTAT 57.292 45.000 22.75 11.05 41.12 2.29
1665 2523 3.828875 TGAACCACATGCGGATGTATA 57.171 42.857 22.75 4.68 41.12 1.47
1666 2524 4.350368 TGAACCACATGCGGATGTATAT 57.650 40.909 22.75 10.98 41.12 0.86
1667 2525 5.476091 TGAACCACATGCGGATGTATATA 57.524 39.130 22.75 5.74 41.12 0.86
1668 2526 5.478407 TGAACCACATGCGGATGTATATAG 58.522 41.667 22.75 9.66 41.12 1.31
1669 2527 5.245075 TGAACCACATGCGGATGTATATAGA 59.755 40.000 22.75 2.70 41.12 1.98
1670 2528 5.939764 ACCACATGCGGATGTATATAGAT 57.060 39.130 22.75 0.00 41.12 1.98
1671 2529 5.664457 ACCACATGCGGATGTATATAGATG 58.336 41.667 22.75 7.52 41.12 2.90
1672 2530 4.509230 CCACATGCGGATGTATATAGATGC 59.491 45.833 22.75 0.00 41.12 3.91
1673 2531 5.111293 CACATGCGGATGTATATAGATGCA 58.889 41.667 22.75 9.11 41.12 3.96
1674 2532 5.756833 CACATGCGGATGTATATAGATGCAT 59.243 40.000 22.75 0.00 41.12 3.96
1675 2533 6.259387 CACATGCGGATGTATATAGATGCATT 59.741 38.462 22.75 0.00 41.12 3.56
1676 2534 6.825213 ACATGCGGATGTATATAGATGCATTT 59.175 34.615 21.92 0.00 41.27 2.32
1677 2535 7.337689 ACATGCGGATGTATATAGATGCATTTT 59.662 33.333 21.92 0.00 41.27 1.82
1678 2536 8.829612 CATGCGGATGTATATAGATGCATTTTA 58.170 33.333 9.01 0.00 38.38 1.52
1679 2537 8.424274 TGCGGATGTATATAGATGCATTTTAG 57.576 34.615 11.19 0.00 38.38 1.85
1680 2538 8.257306 TGCGGATGTATATAGATGCATTTTAGA 58.743 33.333 11.19 0.00 38.38 2.10
1681 2539 8.759641 GCGGATGTATATAGATGCATTTTAGAG 58.240 37.037 11.19 0.00 38.38 2.43
1682 2540 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
1692 2550 8.430801 AGATGCATTTTAGAGTGTAGATTCAC 57.569 34.615 0.00 0.00 38.46 3.18
1703 2561 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1704 2562 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1705 2563 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1706 2564 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1707 2565 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1708 2566 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1709 2567 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1710 2568 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1711 2569 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1712 2570 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1713 2571 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1714 2572 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1715 2573 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
1716 2574 5.348986 TCATTTTGCTCCGTATGTAGTCTC 58.651 41.667 0.00 0.00 0.00 3.36
1717 2575 5.127194 TCATTTTGCTCCGTATGTAGTCTCT 59.873 40.000 0.00 0.00 0.00 3.10
1718 2576 6.320418 TCATTTTGCTCCGTATGTAGTCTCTA 59.680 38.462 0.00 0.00 0.00 2.43
1719 2577 5.752892 TTTGCTCCGTATGTAGTCTCTAG 57.247 43.478 0.00 0.00 0.00 2.43
1720 2578 4.418973 TGCTCCGTATGTAGTCTCTAGT 57.581 45.455 0.00 0.00 0.00 2.57
1721 2579 4.127907 TGCTCCGTATGTAGTCTCTAGTG 58.872 47.826 0.00 0.00 0.00 2.74
1722 2580 3.499157 GCTCCGTATGTAGTCTCTAGTGG 59.501 52.174 0.00 0.00 0.00 4.00
1723 2581 4.743045 GCTCCGTATGTAGTCTCTAGTGGA 60.743 50.000 0.00 0.00 0.00 4.02
1724 2582 5.363562 TCCGTATGTAGTCTCTAGTGGAA 57.636 43.478 0.00 0.00 0.00 3.53
1725 2583 5.938279 TCCGTATGTAGTCTCTAGTGGAAT 58.062 41.667 0.00 0.00 0.00 3.01
1726 2584 5.996513 TCCGTATGTAGTCTCTAGTGGAATC 59.003 44.000 0.00 0.00 0.00 2.52
1727 2585 5.998981 CCGTATGTAGTCTCTAGTGGAATCT 59.001 44.000 0.00 0.00 0.00 2.40
1728 2586 6.148150 CCGTATGTAGTCTCTAGTGGAATCTC 59.852 46.154 0.00 0.00 0.00 2.75
1770 2628 1.512310 CGGAGTGCTTCTCGTCGTC 60.512 63.158 0.00 0.00 43.60 4.20
1779 2638 1.239296 TTCTCGTCGTCCGTCATGGT 61.239 55.000 0.00 0.00 39.52 3.55
1789 2648 2.801679 GTCCGTCATGGTCGTTTTACAA 59.198 45.455 9.50 0.00 39.52 2.41
1823 2682 1.974265 TTGTGAGAATTCAACCCGCA 58.026 45.000 8.44 4.06 34.49 5.69
1831 2690 2.622064 ATTCAACCCGCAGTCCTATC 57.378 50.000 0.00 0.00 0.00 2.08
1840 2699 2.693591 CCGCAGTCCTATCTTAAGTGGA 59.306 50.000 1.63 6.47 0.00 4.02
1844 2703 6.326375 CGCAGTCCTATCTTAAGTGGATATC 58.674 44.000 14.24 0.00 0.00 1.63
1846 2705 7.319646 GCAGTCCTATCTTAAGTGGATATCTG 58.680 42.308 14.24 15.64 0.00 2.90
2137 3026 2.679996 TCGGGCTGCAGAGCTACA 60.680 61.111 20.43 0.00 45.44 2.74
2220 3109 2.766651 GATGGCGTGGAGGGGGTA 60.767 66.667 0.00 0.00 0.00 3.69
2341 3249 0.990818 ATGGAGGAAGAAGGGGAGGC 60.991 60.000 0.00 0.00 0.00 4.70
2651 3593 3.610791 GAAAAGGACTTGCGCCGGC 62.611 63.158 19.07 19.07 40.52 6.13
2715 3659 2.475111 CGCAGTTGAACAACACGAGTAT 59.525 45.455 20.14 0.00 43.47 2.12
2987 3938 3.311110 GTGAGGCGTGACCCAGGA 61.311 66.667 0.00 0.00 40.58 3.86
3125 6985 2.170985 CAGCTAACGCGTGTGTGC 59.829 61.111 14.98 15.00 42.32 4.57
3224 7089 5.869649 ACCTGCTTTTTGTAGTTTGGATT 57.130 34.783 0.00 0.00 0.00 3.01
3265 7130 2.496899 ACTTTGGATCCTTCACGCAT 57.503 45.000 14.23 0.00 0.00 4.73
3282 7147 5.289917 TCACGCATCGATAAAAATCTTCGAA 59.710 36.000 0.00 0.00 44.14 3.71
3290 7155 8.607441 TCGATAAAAATCTTCGAATCCATCAT 57.393 30.769 0.00 0.00 38.80 2.45
3316 7181 6.655062 CGAAAGTGTTAGAGCATTTACAACA 58.345 36.000 0.00 0.00 0.00 3.33
3339 7204 5.527951 CAGGACATCTTCAATCCATCTCAAG 59.472 44.000 0.00 0.00 34.73 3.02
3343 7208 4.736126 TCTTCAATCCATCTCAAGCGTA 57.264 40.909 0.00 0.00 0.00 4.42
3352 7217 3.525537 CATCTCAAGCGTACAGGTGAAT 58.474 45.455 0.00 0.00 0.00 2.57
3399 7264 2.812499 GATTCAGACGGGCGCCTA 59.188 61.111 28.56 2.01 0.00 3.93
3500 7370 1.972223 CTCCACGTCAGACCCGACT 60.972 63.158 0.00 0.00 33.54 4.18
3531 7402 6.551975 TGTCTCACCGACCCTTTATATATTCA 59.448 38.462 0.00 0.00 42.13 2.57
3556 7427 0.965363 ATCCGCTCGCCAAACCAAAT 60.965 50.000 0.00 0.00 0.00 2.32
3974 7864 8.175716 GGACAAAAAGAAAATAGTACGATCAGG 58.824 37.037 0.00 0.00 0.00 3.86
4173 8063 8.850454 TCTAAAAAGTGTTCACATGCTTAAAC 57.150 30.769 5.74 0.00 0.00 2.01
4424 8322 1.226859 CGTCCAGCTCGCCGATTAA 60.227 57.895 0.00 0.00 0.00 1.40
4433 9275 5.802956 CCAGCTCGCCGATTAATTTTTAAAA 59.197 36.000 0.00 0.00 0.00 1.52
4464 9307 2.296792 TCACTTGTGATGGTGTGGTTG 58.703 47.619 0.00 0.00 35.26 3.77
4519 9363 0.107703 GGCCAAGATCGTCACCATGA 60.108 55.000 0.00 0.00 0.00 3.07
5209 13625 2.732507 ACATCCCCTCCTGATCTCCTAT 59.267 50.000 0.00 0.00 0.00 2.57
5263 13680 1.202663 CGACCCTACCTCTCGATCTCA 60.203 57.143 0.00 0.00 0.00 3.27
5274 13691 2.747822 CGATCTCACCCGTCGACGT 61.748 63.158 33.49 16.10 37.55 4.34
5345 13762 1.137675 CTCCTGCGTCATGATCTCCAA 59.862 52.381 0.00 0.00 0.00 3.53
5411 13828 4.081198 CAGCCTCCCATATCCATCTCTTAC 60.081 50.000 0.00 0.00 0.00 2.34
5523 13942 0.958876 AGACGAAACGGATTTGGGGC 60.959 55.000 0.00 0.00 0.00 5.80
5783 14202 8.251026 CCACATCAGACTGTTACTCTAATGTAA 58.749 37.037 1.59 0.00 0.00 2.41
6065 14484 3.936203 AACACTCCGCTCGGCCAA 61.936 61.111 2.24 0.00 34.68 4.52
6066 14485 3.469863 AACACTCCGCTCGGCCAAA 62.470 57.895 2.24 0.00 34.68 3.28
6067 14486 3.423154 CACTCCGCTCGGCCAAAC 61.423 66.667 2.24 0.00 34.68 2.93
6078 14497 3.195698 GCCAAACGCCTCGCCTAG 61.196 66.667 0.00 0.00 0.00 3.02
6080 14499 2.511600 CAAACGCCTCGCCTAGGG 60.512 66.667 11.72 0.44 46.65 3.53
6081 14500 4.468689 AAACGCCTCGCCTAGGGC 62.469 66.667 11.72 4.14 46.65 5.19
6094 14513 3.425162 CCTAGGGCATAAATGGAGGTC 57.575 52.381 0.00 0.00 0.00 3.85
6095 14514 2.982488 CCTAGGGCATAAATGGAGGTCT 59.018 50.000 0.00 0.00 0.00 3.85
6096 14515 4.168101 CCTAGGGCATAAATGGAGGTCTA 58.832 47.826 0.00 0.00 0.00 2.59
6097 14516 4.223923 CCTAGGGCATAAATGGAGGTCTAG 59.776 50.000 0.00 0.00 0.00 2.43
6098 14517 2.982488 AGGGCATAAATGGAGGTCTAGG 59.018 50.000 0.00 0.00 0.00 3.02
6099 14518 2.553247 GGGCATAAATGGAGGTCTAGGC 60.553 54.545 0.00 0.00 0.00 3.93
6100 14519 2.106511 GGCATAAATGGAGGTCTAGGCA 59.893 50.000 0.00 0.00 0.00 4.75
6101 14520 3.406764 GCATAAATGGAGGTCTAGGCAG 58.593 50.000 0.00 0.00 0.00 4.85
6102 14521 3.808618 GCATAAATGGAGGTCTAGGCAGG 60.809 52.174 0.00 0.00 0.00 4.85
6103 14522 1.216990 AAATGGAGGTCTAGGCAGGG 58.783 55.000 0.00 0.00 0.00 4.45
6104 14523 1.348775 AATGGAGGTCTAGGCAGGGC 61.349 60.000 0.00 0.00 0.00 5.19
6105 14524 2.365635 GGAGGTCTAGGCAGGGCA 60.366 66.667 0.00 0.00 0.00 5.36
6106 14525 1.995626 GGAGGTCTAGGCAGGGCAA 60.996 63.158 0.00 0.00 0.00 4.52
6107 14526 1.524482 GAGGTCTAGGCAGGGCAAG 59.476 63.158 0.00 0.00 0.00 4.01
6108 14527 2.124529 GGTCTAGGCAGGGCAAGC 60.125 66.667 0.00 0.00 0.00 4.01
6109 14528 2.671070 GTCTAGGCAGGGCAAGCA 59.329 61.111 2.86 0.00 0.00 3.91
6110 14529 1.002134 GTCTAGGCAGGGCAAGCAA 60.002 57.895 2.86 0.00 0.00 3.91
6111 14530 1.028868 GTCTAGGCAGGGCAAGCAAG 61.029 60.000 2.86 0.30 0.00 4.01
6112 14531 1.751927 CTAGGCAGGGCAAGCAAGG 60.752 63.158 2.86 0.00 0.00 3.61
6113 14532 2.202236 CTAGGCAGGGCAAGCAAGGA 62.202 60.000 2.86 0.00 0.00 3.36
6114 14533 1.788518 TAGGCAGGGCAAGCAAGGAA 61.789 55.000 2.86 0.00 0.00 3.36
6115 14534 1.986210 GGCAGGGCAAGCAAGGAAT 60.986 57.895 2.86 0.00 0.00 3.01
6116 14535 1.547472 GGCAGGGCAAGCAAGGAATT 61.547 55.000 2.86 0.00 0.00 2.17
6117 14536 0.390735 GCAGGGCAAGCAAGGAATTG 60.391 55.000 0.00 0.00 0.00 2.32
6129 14548 3.281332 GGAATTGCCTACCCAAGCA 57.719 52.632 0.00 0.00 37.18 3.91
6134 14553 2.373335 TTGCCTACCCAAGCAAGAAA 57.627 45.000 0.00 0.00 43.74 2.52
6135 14554 2.603075 TGCCTACCCAAGCAAGAAAT 57.397 45.000 0.00 0.00 35.69 2.17
6136 14555 2.446435 TGCCTACCCAAGCAAGAAATC 58.554 47.619 0.00 0.00 35.69 2.17
6137 14556 2.224992 TGCCTACCCAAGCAAGAAATCA 60.225 45.455 0.00 0.00 35.69 2.57
6138 14557 3.026694 GCCTACCCAAGCAAGAAATCAT 58.973 45.455 0.00 0.00 0.00 2.45
6139 14558 3.181483 GCCTACCCAAGCAAGAAATCATG 60.181 47.826 0.00 0.00 0.00 3.07
6140 14559 3.181483 CCTACCCAAGCAAGAAATCATGC 60.181 47.826 2.56 2.56 40.51 4.06
6141 14560 2.250031 ACCCAAGCAAGAAATCATGCA 58.750 42.857 12.51 0.00 42.43 3.96
6142 14561 2.835764 ACCCAAGCAAGAAATCATGCAT 59.164 40.909 12.51 0.00 42.43 3.96
6143 14562 3.118884 ACCCAAGCAAGAAATCATGCATC 60.119 43.478 12.51 0.00 42.43 3.91
6144 14563 3.118920 CCCAAGCAAGAAATCATGCATCA 60.119 43.478 12.51 0.00 42.43 3.07
6145 14564 4.442893 CCCAAGCAAGAAATCATGCATCAT 60.443 41.667 12.51 0.00 42.43 2.45
6146 14565 5.221362 CCCAAGCAAGAAATCATGCATCATA 60.221 40.000 12.51 0.00 42.43 2.15
6147 14566 6.455647 CCAAGCAAGAAATCATGCATCATAT 58.544 36.000 12.51 0.00 42.43 1.78
6148 14567 6.929049 CCAAGCAAGAAATCATGCATCATATT 59.071 34.615 12.51 0.00 42.43 1.28
6149 14568 7.095649 CCAAGCAAGAAATCATGCATCATATTG 60.096 37.037 12.51 7.08 42.43 1.90
6150 14569 5.926542 AGCAAGAAATCATGCATCATATTGC 59.073 36.000 15.64 15.64 42.43 3.56
6162 14581 6.490566 GCATCATATTGCACTGATATGTCA 57.509 37.500 13.87 0.00 42.31 3.58
6163 14582 6.905578 GCATCATATTGCACTGATATGTCAA 58.094 36.000 13.87 0.06 42.31 3.18
6164 14583 7.364970 GCATCATATTGCACTGATATGTCAAA 58.635 34.615 13.87 0.00 42.31 2.69
6165 14584 8.027189 GCATCATATTGCACTGATATGTCAAAT 58.973 33.333 13.87 1.70 42.31 2.32
6166 14585 9.341899 CATCATATTGCACTGATATGTCAAATG 57.658 33.333 13.87 8.41 38.21 2.32
6167 14586 8.454570 TCATATTGCACTGATATGTCAAATGT 57.545 30.769 13.87 0.00 38.21 2.71
6168 14587 8.347035 TCATATTGCACTGATATGTCAAATGTG 58.653 33.333 13.87 6.11 38.21 3.21
6169 14588 5.963176 TTGCACTGATATGTCAAATGTGT 57.037 34.783 10.58 0.00 33.16 3.72
6170 14589 5.963176 TGCACTGATATGTCAAATGTGTT 57.037 34.783 10.58 0.00 33.16 3.32
6171 14590 7.446001 TTGCACTGATATGTCAAATGTGTTA 57.554 32.000 10.58 1.09 33.16 2.41
6172 14591 7.628769 TGCACTGATATGTCAAATGTGTTAT 57.371 32.000 10.58 0.00 33.16 1.89
6173 14592 8.729805 TGCACTGATATGTCAAATGTGTTATA 57.270 30.769 10.58 0.00 33.16 0.98
6174 14593 9.341078 TGCACTGATATGTCAAATGTGTTATAT 57.659 29.630 10.58 0.00 33.16 0.86
6191 14610 9.599866 TGTGTTATATTCCAATGAAGTAGACAG 57.400 33.333 0.00 0.00 33.05 3.51
6192 14611 9.601217 GTGTTATATTCCAATGAAGTAGACAGT 57.399 33.333 0.00 0.00 33.05 3.55
6232 14651 6.969993 TGCCCTAAAATAATATCAACACCC 57.030 37.500 0.00 0.00 0.00 4.61
6233 14652 6.436027 TGCCCTAAAATAATATCAACACCCA 58.564 36.000 0.00 0.00 0.00 4.51
6234 14653 7.072562 TGCCCTAAAATAATATCAACACCCAT 58.927 34.615 0.00 0.00 0.00 4.00
6235 14654 8.228206 TGCCCTAAAATAATATCAACACCCATA 58.772 33.333 0.00 0.00 0.00 2.74
6236 14655 9.255029 GCCCTAAAATAATATCAACACCCATAT 57.745 33.333 0.00 0.00 0.00 1.78
6267 14686 8.734218 TCACAAATACACTACAAGTAAAACCA 57.266 30.769 0.00 0.00 0.00 3.67
6268 14687 9.175312 TCACAAATACACTACAAGTAAAACCAA 57.825 29.630 0.00 0.00 0.00 3.67
6269 14688 9.959749 CACAAATACACTACAAGTAAAACCAAT 57.040 29.630 0.00 0.00 0.00 3.16
6276 14695 8.938906 ACACTACAAGTAAAACCAATATTACCG 58.061 33.333 0.00 0.00 33.47 4.02
6277 14696 7.906527 CACTACAAGTAAAACCAATATTACCGC 59.093 37.037 0.00 0.00 33.47 5.68
6278 14697 6.198650 ACAAGTAAAACCAATATTACCGCC 57.801 37.500 0.00 0.00 33.47 6.13
6279 14698 5.947566 ACAAGTAAAACCAATATTACCGCCT 59.052 36.000 0.00 0.00 33.47 5.52
6280 14699 7.111466 ACAAGTAAAACCAATATTACCGCCTA 58.889 34.615 0.00 0.00 33.47 3.93
6281 14700 7.281549 ACAAGTAAAACCAATATTACCGCCTAG 59.718 37.037 0.00 0.00 33.47 3.02
6283 14702 2.853235 ACCAATATTACCGCCTAGGC 57.147 50.000 24.75 24.75 46.52 3.93
6284 14703 1.350019 ACCAATATTACCGCCTAGGCC 59.650 52.381 28.09 10.55 46.52 5.19
6285 14704 1.349688 CCAATATTACCGCCTAGGCCA 59.650 52.381 28.09 10.72 46.52 5.36
6286 14705 2.423577 CAATATTACCGCCTAGGCCAC 58.576 52.381 28.09 1.00 46.52 5.01
6287 14706 0.606604 ATATTACCGCCTAGGCCACG 59.393 55.000 28.09 17.33 46.52 4.94
6288 14707 2.091102 TATTACCGCCTAGGCCACGC 62.091 60.000 28.09 2.76 46.52 5.34
6299 14718 4.410400 GCCACGCCTAGGGTGCTT 62.410 66.667 19.53 0.00 43.61 3.91
6300 14719 3.026431 GCCACGCCTAGGGTGCTTA 62.026 63.158 19.53 0.00 43.61 3.09
6301 14720 1.144057 CCACGCCTAGGGTGCTTAG 59.856 63.158 19.53 7.19 43.61 2.18
6302 14721 1.144057 CACGCCTAGGGTGCTTAGG 59.856 63.158 11.72 0.00 39.43 2.69
6318 14737 3.467226 GGCACCGCCTAGGCACTA 61.467 66.667 32.47 0.00 46.69 2.74
6343 14762 3.497031 GCCAACCGCCTCGCTTAC 61.497 66.667 0.00 0.00 0.00 2.34
6344 14763 3.186047 CCAACCGCCTCGCTTACG 61.186 66.667 0.00 0.00 42.01 3.18
6345 14764 3.849953 CAACCGCCTCGCTTACGC 61.850 66.667 0.00 0.00 39.84 4.42
6348 14767 3.896133 CCGCCTCGCTTACGCCTA 61.896 66.667 0.00 0.00 39.84 3.93
6349 14768 2.654404 CGCCTCGCTTACGCCTAC 60.654 66.667 0.00 0.00 39.84 3.18
6350 14769 2.279318 GCCTCGCTTACGCCTACC 60.279 66.667 0.00 0.00 39.84 3.18
6351 14770 2.025727 CCTCGCTTACGCCTACCG 59.974 66.667 0.00 0.00 44.21 4.02
6352 14771 2.654404 CTCGCTTACGCCTACCGC 60.654 66.667 0.00 0.00 41.76 5.68
6353 14772 3.122250 CTCGCTTACGCCTACCGCT 62.122 63.158 0.00 0.00 41.76 5.52
6354 14773 2.202703 CGCTTACGCCTACCGCTT 60.203 61.111 0.00 0.00 41.76 4.68
6355 14774 1.808390 CGCTTACGCCTACCGCTTT 60.808 57.895 0.00 0.00 41.76 3.51
6356 14775 1.356527 CGCTTACGCCTACCGCTTTT 61.357 55.000 0.00 0.00 41.76 2.27
6357 14776 0.800631 GCTTACGCCTACCGCTTTTT 59.199 50.000 0.00 0.00 41.76 1.94
6358 14777 1.201998 GCTTACGCCTACCGCTTTTTC 60.202 52.381 0.00 0.00 41.76 2.29
6359 14778 1.395954 CTTACGCCTACCGCTTTTTCC 59.604 52.381 0.00 0.00 41.76 3.13
6360 14779 0.321021 TACGCCTACCGCTTTTTCCA 59.679 50.000 0.00 0.00 41.76 3.53
6361 14780 0.535553 ACGCCTACCGCTTTTTCCAA 60.536 50.000 0.00 0.00 41.76 3.53
6362 14781 0.109919 CGCCTACCGCTTTTTCCAAC 60.110 55.000 0.00 0.00 34.21 3.77
6363 14782 0.242825 GCCTACCGCTTTTTCCAACC 59.757 55.000 0.00 0.00 0.00 3.77
6364 14783 1.905637 CCTACCGCTTTTTCCAACCT 58.094 50.000 0.00 0.00 0.00 3.50
6365 14784 2.235891 CCTACCGCTTTTTCCAACCTT 58.764 47.619 0.00 0.00 0.00 3.50
6366 14785 2.030274 CCTACCGCTTTTTCCAACCTTG 60.030 50.000 0.00 0.00 0.00 3.61
6367 14786 1.770294 ACCGCTTTTTCCAACCTTGA 58.230 45.000 0.00 0.00 0.00 3.02
6368 14787 1.681264 ACCGCTTTTTCCAACCTTGAG 59.319 47.619 0.00 0.00 0.00 3.02
6369 14788 1.681264 CCGCTTTTTCCAACCTTGAGT 59.319 47.619 0.00 0.00 0.00 3.41
6370 14789 2.543653 CCGCTTTTTCCAACCTTGAGTG 60.544 50.000 0.00 0.00 0.00 3.51
6371 14790 2.099098 CGCTTTTTCCAACCTTGAGTGT 59.901 45.455 0.00 0.00 0.00 3.55
6372 14791 3.314080 CGCTTTTTCCAACCTTGAGTGTA 59.686 43.478 0.00 0.00 0.00 2.90
6373 14792 4.201970 CGCTTTTTCCAACCTTGAGTGTAA 60.202 41.667 0.00 0.00 0.00 2.41
6374 14793 5.041287 GCTTTTTCCAACCTTGAGTGTAAC 58.959 41.667 0.00 0.00 0.00 2.50
6375 14794 5.585820 TTTTTCCAACCTTGAGTGTAACC 57.414 39.130 0.00 0.00 37.80 2.85
6376 14795 4.513406 TTTCCAACCTTGAGTGTAACCT 57.487 40.909 0.00 0.00 37.80 3.50
6377 14796 4.513406 TTCCAACCTTGAGTGTAACCTT 57.487 40.909 0.00 0.00 37.80 3.50
6378 14797 5.633655 TTCCAACCTTGAGTGTAACCTTA 57.366 39.130 0.00 0.00 37.80 2.69
6379 14798 5.836024 TCCAACCTTGAGTGTAACCTTAT 57.164 39.130 0.00 0.00 37.80 1.73
6380 14799 5.801380 TCCAACCTTGAGTGTAACCTTATC 58.199 41.667 0.00 0.00 37.80 1.75
6381 14800 5.546499 TCCAACCTTGAGTGTAACCTTATCT 59.454 40.000 0.00 0.00 37.80 1.98
6382 14801 6.043938 TCCAACCTTGAGTGTAACCTTATCTT 59.956 38.462 0.00 0.00 37.80 2.40
6383 14802 6.715264 CCAACCTTGAGTGTAACCTTATCTTT 59.285 38.462 0.00 0.00 37.80 2.52
6384 14803 7.308589 CCAACCTTGAGTGTAACCTTATCTTTG 60.309 40.741 0.00 0.00 37.80 2.77
6385 14804 7.074653 ACCTTGAGTGTAACCTTATCTTTGA 57.925 36.000 0.00 0.00 37.80 2.69
6386 14805 6.935208 ACCTTGAGTGTAACCTTATCTTTGAC 59.065 38.462 0.00 0.00 37.80 3.18
6387 14806 6.090898 CCTTGAGTGTAACCTTATCTTTGACG 59.909 42.308 0.00 0.00 37.80 4.35
6388 14807 6.092955 TGAGTGTAACCTTATCTTTGACGT 57.907 37.500 0.00 0.00 37.80 4.34
6389 14808 6.518493 TGAGTGTAACCTTATCTTTGACGTT 58.482 36.000 0.00 0.00 37.80 3.99
6390 14809 6.987992 TGAGTGTAACCTTATCTTTGACGTTT 59.012 34.615 0.00 0.00 37.80 3.60
6391 14810 7.042321 TGAGTGTAACCTTATCTTTGACGTTTG 60.042 37.037 0.00 0.00 37.80 2.93
6392 14811 6.764560 AGTGTAACCTTATCTTTGACGTTTGT 59.235 34.615 0.00 0.00 37.80 2.83
6393 14812 7.927629 AGTGTAACCTTATCTTTGACGTTTGTA 59.072 33.333 0.00 0.00 37.80 2.41
6394 14813 8.550376 GTGTAACCTTATCTTTGACGTTTGTAA 58.450 33.333 0.00 0.00 0.00 2.41
6395 14814 9.107177 TGTAACCTTATCTTTGACGTTTGTAAA 57.893 29.630 0.00 0.00 0.00 2.01
6396 14815 9.934190 GTAACCTTATCTTTGACGTTTGTAAAA 57.066 29.630 0.00 0.00 0.00 1.52
6398 14817 8.217131 ACCTTATCTTTGACGTTTGTAAAAGT 57.783 30.769 5.42 0.00 44.10 2.66
6399 14818 8.680001 ACCTTATCTTTGACGTTTGTAAAAGTT 58.320 29.630 5.42 1.08 44.10 2.66
6400 14819 8.953990 CCTTATCTTTGACGTTTGTAAAAGTTG 58.046 33.333 5.42 0.00 44.10 3.16
6401 14820 8.844441 TTATCTTTGACGTTTGTAAAAGTTGG 57.156 30.769 5.42 0.00 44.10 3.77
6402 14821 6.497785 TCTTTGACGTTTGTAAAAGTTGGA 57.502 33.333 5.42 0.00 44.10 3.53
6403 14822 7.090953 TCTTTGACGTTTGTAAAAGTTGGAT 57.909 32.000 5.42 0.00 44.10 3.41
6404 14823 7.540299 TCTTTGACGTTTGTAAAAGTTGGATT 58.460 30.769 5.42 0.00 44.10 3.01
6405 14824 8.675504 TCTTTGACGTTTGTAAAAGTTGGATTA 58.324 29.630 5.42 0.00 44.10 1.75
6406 14825 9.291664 CTTTGACGTTTGTAAAAGTTGGATTAA 57.708 29.630 0.00 0.00 40.40 1.40
6407 14826 9.635520 TTTGACGTTTGTAAAAGTTGGATTAAA 57.364 25.926 0.00 0.00 30.86 1.52
6408 14827 9.635520 TTGACGTTTGTAAAAGTTGGATTAAAA 57.364 25.926 0.00 0.00 30.86 1.52
6409 14828 9.635520 TGACGTTTGTAAAAGTTGGATTAAAAA 57.364 25.926 0.00 0.00 30.86 1.94
6428 14847 2.634982 AAGTGTTGCATAATGGCACG 57.365 45.000 0.00 0.00 44.86 5.34
6429 14848 1.533625 AGTGTTGCATAATGGCACGT 58.466 45.000 0.00 0.00 44.86 4.49
6430 14849 1.199789 AGTGTTGCATAATGGCACGTG 59.800 47.619 12.28 12.28 44.86 4.49
6431 14850 0.525311 TGTTGCATAATGGCACGTGG 59.475 50.000 18.88 0.00 44.86 4.94
6432 14851 0.808125 GTTGCATAATGGCACGTGGA 59.192 50.000 18.88 0.00 44.86 4.02
6433 14852 1.093972 TTGCATAATGGCACGTGGAG 58.906 50.000 18.88 0.00 44.86 3.86
6434 14853 1.356624 GCATAATGGCACGTGGAGC 59.643 57.895 18.88 2.14 0.00 4.70
6435 14854 1.375853 GCATAATGGCACGTGGAGCA 61.376 55.000 18.88 0.00 0.00 4.26
6436 14855 1.093972 CATAATGGCACGTGGAGCAA 58.906 50.000 18.88 0.00 0.00 3.91
6437 14856 1.064505 CATAATGGCACGTGGAGCAAG 59.935 52.381 18.88 0.00 0.00 4.01
6438 14857 0.036164 TAATGGCACGTGGAGCAAGT 59.964 50.000 18.88 0.00 0.00 3.16
6439 14858 0.823356 AATGGCACGTGGAGCAAGTT 60.823 50.000 18.88 0.00 0.00 2.66
6440 14859 0.036164 ATGGCACGTGGAGCAAGTTA 59.964 50.000 18.88 0.00 0.00 2.24
6441 14860 0.036164 TGGCACGTGGAGCAAGTTAT 59.964 50.000 18.88 0.00 0.00 1.89
6442 14861 1.276705 TGGCACGTGGAGCAAGTTATA 59.723 47.619 18.88 0.00 0.00 0.98
6443 14862 2.093181 TGGCACGTGGAGCAAGTTATAT 60.093 45.455 18.88 0.00 0.00 0.86
6444 14863 2.943033 GGCACGTGGAGCAAGTTATATT 59.057 45.455 18.88 0.00 0.00 1.28
6445 14864 3.377172 GGCACGTGGAGCAAGTTATATTT 59.623 43.478 18.88 0.00 0.00 1.40
6446 14865 4.573201 GGCACGTGGAGCAAGTTATATTTA 59.427 41.667 18.88 0.00 0.00 1.40
6447 14866 5.065474 GGCACGTGGAGCAAGTTATATTTAA 59.935 40.000 18.88 0.00 0.00 1.52
6448 14867 6.238648 GGCACGTGGAGCAAGTTATATTTAAT 60.239 38.462 18.88 0.00 0.00 1.40
6449 14868 7.041644 GGCACGTGGAGCAAGTTATATTTAATA 60.042 37.037 18.88 0.00 0.00 0.98
6450 14869 8.504005 GCACGTGGAGCAAGTTATATTTAATAT 58.496 33.333 18.88 2.85 0.00 1.28
6456 14875 9.556030 GGAGCAAGTTATATTTAATATTTCGCC 57.444 33.333 2.59 0.00 0.00 5.54
6457 14876 9.556030 GAGCAAGTTATATTTAATATTTCGCCC 57.444 33.333 2.59 0.00 0.00 6.13
6458 14877 8.234546 AGCAAGTTATATTTAATATTTCGCCCG 58.765 33.333 2.59 0.00 0.00 6.13
6459 14878 7.483691 GCAAGTTATATTTAATATTTCGCCCGG 59.516 37.037 2.59 0.00 0.00 5.73
6460 14879 8.508875 CAAGTTATATTTAATATTTCGCCCGGT 58.491 33.333 0.00 0.00 0.00 5.28
6461 14880 8.036273 AGTTATATTTAATATTTCGCCCGGTG 57.964 34.615 0.00 0.00 0.00 4.94
6462 14881 3.636282 ATTTAATATTTCGCCCGGTGC 57.364 42.857 0.00 2.24 0.00 5.01
6463 14882 2.039818 TTAATATTTCGCCCGGTGCA 57.960 45.000 14.17 0.00 41.33 4.57
6464 14883 2.039818 TAATATTTCGCCCGGTGCAA 57.960 45.000 14.17 3.55 41.33 4.08
6465 14884 0.454196 AATATTTCGCCCGGTGCAAC 59.546 50.000 14.17 0.00 41.33 4.17
6466 14885 1.711060 ATATTTCGCCCGGTGCAACG 61.711 55.000 19.45 19.45 41.33 4.10
6477 14896 3.600694 TGCAACGCACGGGCATTT 61.601 55.556 11.77 0.00 41.24 2.32
6478 14897 2.355718 GCAACGCACGGGCATTTT 60.356 55.556 11.77 0.00 41.24 1.82
6479 14898 2.656807 GCAACGCACGGGCATTTTG 61.657 57.895 11.77 10.98 41.24 2.44
6480 14899 1.299773 CAACGCACGGGCATTTTGT 60.300 52.632 11.77 0.00 41.24 2.83
6481 14900 0.039978 CAACGCACGGGCATTTTGTA 60.040 50.000 11.77 0.00 41.24 2.41
6482 14901 0.039888 AACGCACGGGCATTTTGTAC 60.040 50.000 11.77 0.00 41.24 2.90
6483 14902 0.887387 ACGCACGGGCATTTTGTACT 60.887 50.000 11.77 0.00 41.24 2.73
6484 14903 1.080298 CGCACGGGCATTTTGTACTA 58.920 50.000 11.77 0.00 41.24 1.82
6485 14904 1.062002 CGCACGGGCATTTTGTACTAG 59.938 52.381 11.77 0.00 41.24 2.57
6486 14905 2.081462 GCACGGGCATTTTGTACTAGT 58.919 47.619 3.77 0.00 40.72 2.57
6487 14906 3.264104 GCACGGGCATTTTGTACTAGTA 58.736 45.455 3.77 0.00 40.72 1.82
6488 14907 3.685756 GCACGGGCATTTTGTACTAGTAA 59.314 43.478 3.77 0.00 40.72 2.24
6489 14908 4.154556 GCACGGGCATTTTGTACTAGTAAA 59.845 41.667 3.77 0.00 40.72 2.01
6490 14909 5.672819 GCACGGGCATTTTGTACTAGTAAAG 60.673 44.000 3.77 0.00 40.72 1.85
6491 14910 5.640357 CACGGGCATTTTGTACTAGTAAAGA 59.360 40.000 3.61 0.00 0.00 2.52
6492 14911 5.640783 ACGGGCATTTTGTACTAGTAAAGAC 59.359 40.000 3.61 0.00 0.00 3.01
6493 14912 5.873164 CGGGCATTTTGTACTAGTAAAGACT 59.127 40.000 3.61 0.00 39.92 3.24
6494 14913 6.370718 CGGGCATTTTGTACTAGTAAAGACTT 59.629 38.462 3.61 0.00 37.10 3.01
6495 14914 7.546667 CGGGCATTTTGTACTAGTAAAGACTTA 59.453 37.037 3.61 0.00 37.10 2.24
6496 14915 9.223099 GGGCATTTTGTACTAGTAAAGACTTAA 57.777 33.333 3.61 0.00 37.10 1.85
6512 14931 7.683437 AAGACTTAAATTTAGAAACGGAGGG 57.317 36.000 0.00 0.00 0.00 4.30
6513 14932 7.012661 AGACTTAAATTTAGAAACGGAGGGA 57.987 36.000 0.00 0.00 0.00 4.20
6514 14933 7.104290 AGACTTAAATTTAGAAACGGAGGGAG 58.896 38.462 0.00 0.00 0.00 4.30
6515 14934 6.776744 ACTTAAATTTAGAAACGGAGGGAGT 58.223 36.000 0.00 0.00 0.00 3.85
6516 14935 7.910584 ACTTAAATTTAGAAACGGAGGGAGTA 58.089 34.615 0.00 0.00 0.00 2.59
6517 14936 7.821359 ACTTAAATTTAGAAACGGAGGGAGTAC 59.179 37.037 0.00 0.00 0.00 2.73
6518 14937 5.750352 AATTTAGAAACGGAGGGAGTACA 57.250 39.130 0.00 0.00 0.00 2.90
6519 14938 5.952347 ATTTAGAAACGGAGGGAGTACAT 57.048 39.130 0.00 0.00 0.00 2.29
6520 14939 7.427989 AATTTAGAAACGGAGGGAGTACATA 57.572 36.000 0.00 0.00 0.00 2.29
6521 14940 6.855763 TTTAGAAACGGAGGGAGTACATAA 57.144 37.500 0.00 0.00 0.00 1.90
6522 14941 4.732672 AGAAACGGAGGGAGTACATAAC 57.267 45.455 0.00 0.00 0.00 1.89
6533 14952 7.093858 GGAGGGAGTACATAACATGATAGTACC 60.094 44.444 0.00 0.00 36.58 3.34
6546 14965 4.446413 GTACCAGACACCCGGCGG 62.446 72.222 21.46 21.46 0.00 6.13
6567 14987 5.511234 GGAGCTAGTTGATCCGTAAGTAA 57.489 43.478 0.00 0.00 41.78 2.24
6578 15000 5.711506 TGATCCGTAAGTAACCAAGTACTGA 59.288 40.000 0.00 0.00 34.50 3.41
6579 15001 6.379133 TGATCCGTAAGTAACCAAGTACTGAT 59.621 38.462 0.00 0.00 34.50 2.90
6580 15002 5.957798 TCCGTAAGTAACCAAGTACTGATG 58.042 41.667 0.00 0.00 34.50 3.07
6581 15003 5.105635 TCCGTAAGTAACCAAGTACTGATGG 60.106 44.000 11.41 11.41 40.87 3.51
6582 15004 5.105635 CCGTAAGTAACCAAGTACTGATGGA 60.106 44.000 18.59 0.00 41.60 3.41
6921 15344 2.414293 GCTCGACTTCTACTTCTTCGCA 60.414 50.000 0.00 0.00 0.00 5.10
7296 16186 1.301479 GTTCCTCCAGCGAAACGGT 60.301 57.895 0.00 0.00 38.40 4.83
7557 16447 3.755628 GTGCCGGTCTCCGCAGTA 61.756 66.667 1.90 0.00 46.86 2.74
7599 16489 2.627515 ATGATGCGCACAACCTCTAT 57.372 45.000 14.90 0.00 0.00 1.98
7641 16531 3.754850 CCACACATGATGCTCTTCTCAAA 59.245 43.478 0.00 0.00 0.00 2.69
7684 16574 1.737735 CTGAGTCGCGCCACATTCA 60.738 57.895 8.15 2.33 0.00 2.57
7740 16630 2.188829 CAATGCCGCACGATGGGAT 61.189 57.895 0.00 0.00 39.48 3.85
7878 16768 3.887716 GGATTCAGCTTGGTGCATTCTAT 59.112 43.478 0.00 0.00 45.94 1.98
7940 16830 0.889306 GAGCTCTACGTGTGGGAGTT 59.111 55.000 6.43 0.00 0.00 3.01
8004 16894 2.388735 CTGCTCCCCTACATCTACACA 58.611 52.381 0.00 0.00 0.00 3.72
8343 17239 4.555709 TCCACCGCACGCCAAAGT 62.556 61.111 0.00 0.00 0.00 2.66
8475 17371 1.946768 GTGAGGTTTAGCTGCAACACA 59.053 47.619 1.02 8.48 0.00 3.72
8506 17402 0.676466 GGGCATCATCACGACCACAA 60.676 55.000 0.00 0.00 0.00 3.33
8543 17439 0.800683 CAGAACTCATACGCGCCGAA 60.801 55.000 5.73 0.00 0.00 4.30
8619 17515 3.788142 AGGGGTTCACCATCTATGTGAAT 59.212 43.478 8.83 0.00 42.91 2.57
8685 17581 1.136305 GTATTCAGCGTCAGTGGGCTA 59.864 52.381 8.91 0.00 37.41 3.93
8700 17596 1.373497 GCTATCGCTGGTCATCGGG 60.373 63.158 0.00 0.00 0.00 5.14
8703 17599 1.273606 CTATCGCTGGTCATCGGGAAT 59.726 52.381 0.00 0.00 0.00 3.01
8830 17894 5.221880 TCATGCATTGTTCTTAACTTGCAC 58.778 37.500 17.17 0.00 46.20 4.57
8833 17897 5.414360 TGCATTGTTCTTAACTTGCACAAA 58.586 33.333 13.31 0.00 42.22 2.83
8839 17903 9.979578 ATTGTTCTTAACTTGCACAAATATTGA 57.020 25.926 0.00 0.00 31.39 2.57
8841 17905 9.243637 TGTTCTTAACTTGCACAAATATTGAAC 57.756 29.630 0.00 0.00 0.00 3.18
8842 17906 9.463443 GTTCTTAACTTGCACAAATATTGAACT 57.537 29.630 0.00 0.00 0.00 3.01
8846 17910 9.593134 TTAACTTGCACAAATATTGAACTTTGT 57.407 25.926 0.00 2.83 44.23 2.83
8847 17911 8.491331 AACTTGCACAAATATTGAACTTTGTT 57.509 26.923 5.31 0.00 42.16 2.83
8848 17912 9.593134 AACTTGCACAAATATTGAACTTTGTTA 57.407 25.926 5.31 0.00 42.16 2.41
8849 17913 9.762933 ACTTGCACAAATATTGAACTTTGTTAT 57.237 25.926 5.31 0.00 42.16 1.89
8851 17915 9.539825 TTGCACAAATATTGAACTTTGTTATGT 57.460 25.926 5.31 0.00 42.16 2.29
8852 17916 8.976471 TGCACAAATATTGAACTTTGTTATGTG 58.024 29.630 5.31 0.00 42.16 3.21
8853 17917 9.190858 GCACAAATATTGAACTTTGTTATGTGA 57.809 29.630 10.95 0.00 42.16 3.58
8862 17926 7.806690 TGAACTTTGTTATGTGACTCTTATGC 58.193 34.615 0.00 0.00 0.00 3.14
8863 17927 6.743575 ACTTTGTTATGTGACTCTTATGCC 57.256 37.500 0.00 0.00 0.00 4.40
8864 17928 6.476378 ACTTTGTTATGTGACTCTTATGCCT 58.524 36.000 0.00 0.00 0.00 4.75
8865 17929 6.595716 ACTTTGTTATGTGACTCTTATGCCTC 59.404 38.462 0.00 0.00 0.00 4.70
8866 17930 5.023533 TGTTATGTGACTCTTATGCCTCC 57.976 43.478 0.00 0.00 0.00 4.30
8867 17931 4.716784 TGTTATGTGACTCTTATGCCTCCT 59.283 41.667 0.00 0.00 0.00 3.69
8868 17932 3.834489 ATGTGACTCTTATGCCTCCTG 57.166 47.619 0.00 0.00 0.00 3.86
8869 17933 2.540383 TGTGACTCTTATGCCTCCTGT 58.460 47.619 0.00 0.00 0.00 4.00
8870 17934 3.708451 TGTGACTCTTATGCCTCCTGTA 58.292 45.455 0.00 0.00 0.00 2.74
8871 17935 4.290093 TGTGACTCTTATGCCTCCTGTAT 58.710 43.478 0.00 0.00 0.00 2.29
8872 17936 4.342378 TGTGACTCTTATGCCTCCTGTATC 59.658 45.833 0.00 0.00 0.00 2.24
8873 17937 4.586841 GTGACTCTTATGCCTCCTGTATCT 59.413 45.833 0.00 0.00 0.00 1.98
8874 17938 4.830046 TGACTCTTATGCCTCCTGTATCTC 59.170 45.833 0.00 0.00 0.00 2.75
8875 17939 4.156477 ACTCTTATGCCTCCTGTATCTCC 58.844 47.826 0.00 0.00 0.00 3.71
8876 17940 4.140805 ACTCTTATGCCTCCTGTATCTCCT 60.141 45.833 0.00 0.00 0.00 3.69
8877 17941 5.075205 ACTCTTATGCCTCCTGTATCTCCTA 59.925 44.000 0.00 0.00 0.00 2.94
8878 17942 5.575157 TCTTATGCCTCCTGTATCTCCTAG 58.425 45.833 0.00 0.00 0.00 3.02
8879 17943 2.685106 TGCCTCCTGTATCTCCTAGG 57.315 55.000 0.82 0.82 0.00 3.02
8880 17944 2.144450 TGCCTCCTGTATCTCCTAGGA 58.856 52.381 11.98 11.98 38.25 2.94
8881 17945 2.724672 TGCCTCCTGTATCTCCTAGGAT 59.275 50.000 13.12 0.11 39.71 3.24
8882 17946 3.096092 GCCTCCTGTATCTCCTAGGATG 58.904 54.545 13.12 6.91 39.71 3.51
8883 17947 3.707316 CCTCCTGTATCTCCTAGGATGG 58.293 54.545 13.12 1.15 39.71 3.51
8884 17948 3.096092 CTCCTGTATCTCCTAGGATGGC 58.904 54.545 13.12 3.99 39.71 4.40
8885 17949 2.724672 TCCTGTATCTCCTAGGATGGCT 59.275 50.000 13.12 0.00 35.76 4.75
8886 17950 3.923425 TCCTGTATCTCCTAGGATGGCTA 59.077 47.826 13.12 0.00 35.76 3.93
8887 17951 4.017958 TCCTGTATCTCCTAGGATGGCTAG 60.018 50.000 13.12 8.52 35.76 3.42
8888 17952 4.264172 CCTGTATCTCCTAGGATGGCTAGT 60.264 50.000 13.12 0.00 33.33 2.57
8889 17953 4.667573 TGTATCTCCTAGGATGGCTAGTG 58.332 47.826 13.12 0.00 0.00 2.74
8890 17954 2.002505 TCTCCTAGGATGGCTAGTGC 57.997 55.000 13.12 0.00 38.76 4.40
8934 17998 9.829507 TGAAAAACAGTTTATTCATCACCAAAT 57.170 25.926 14.55 0.00 0.00 2.32
9172 18237 1.080501 CTTGCTTCGCGTCAGAGGA 60.081 57.895 5.77 0.00 0.00 3.71
9374 18439 2.805671 AGCATCGACGTGAATTTTGACA 59.194 40.909 0.00 0.00 0.00 3.58
9570 18640 0.179121 CATAACGTGACCGCTAGCCA 60.179 55.000 9.66 0.00 37.70 4.75
9580 18650 1.336795 ACCGCTAGCCAAACAAATTGC 60.337 47.619 9.66 0.00 37.73 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 0.608640 GGATATGAGGGTTCGCGGAT 59.391 55.000 6.13 0.00 0.00 4.18
46 47 1.273606 AGATGGATATGAGGGTTCGCG 59.726 52.381 0.00 0.00 0.00 5.87
72 73 2.706112 AAGCCTCCTATCCTCCCTAC 57.294 55.000 0.00 0.00 0.00 3.18
80 81 0.597898 GCGTCCGAAAGCCTCCTATC 60.598 60.000 0.00 0.00 0.00 2.08
135 137 0.611340 GTGGTCTGGAGTAGGGTCGT 60.611 60.000 0.00 0.00 0.00 4.34
138 140 0.492276 AAGGTGGTCTGGAGTAGGGT 59.508 55.000 0.00 0.00 0.00 4.34
142 144 3.858135 AGAGAAAAGGTGGTCTGGAGTA 58.142 45.455 0.00 0.00 0.00 2.59
144 146 3.778954 AAGAGAAAAGGTGGTCTGGAG 57.221 47.619 0.00 0.00 0.00 3.86
145 147 3.716872 AGAAAGAGAAAAGGTGGTCTGGA 59.283 43.478 0.00 0.00 0.00 3.86
148 150 7.998964 TGAATAAAGAAAGAGAAAAGGTGGTCT 59.001 33.333 0.00 0.00 0.00 3.85
202 205 0.098728 GGTCACATGCACGTATTGGC 59.901 55.000 0.00 0.00 0.00 4.52
215 219 4.736473 TCTTCCTCATATATCCGGTCACA 58.264 43.478 0.00 0.00 0.00 3.58
225 229 9.605275 CACAGTCTTCATTTTCTTCCTCATATA 57.395 33.333 0.00 0.00 0.00 0.86
244 248 0.459899 TGTTCACGCAGTCACAGTCT 59.540 50.000 0.00 0.00 41.61 3.24
262 266 1.394697 GCGTGTCCGTCATTTGTTTG 58.605 50.000 0.00 0.00 36.15 2.93
263 267 0.309612 GGCGTGTCCGTCATTTGTTT 59.690 50.000 0.00 0.00 38.92 2.83
300 304 3.186047 CCTAAACGCCTGCGGACG 61.186 66.667 16.63 0.00 44.69 4.79
307 311 3.926058 AATATGACCACCTAAACGCCT 57.074 42.857 0.00 0.00 0.00 5.52
318 322 3.804036 CCGGACTTAGCAAATATGACCA 58.196 45.455 0.00 0.00 0.00 4.02
324 328 4.475051 TTACAGCCGGACTTAGCAAATA 57.525 40.909 5.05 0.00 0.00 1.40
331 335 2.500098 AGAGCATTTACAGCCGGACTTA 59.500 45.455 5.05 0.00 0.00 2.24
345 349 5.975988 TCTTTCTGGGGTATAAGAGCATT 57.024 39.130 0.00 0.00 0.00 3.56
395 407 4.474651 TGTGAGGGGATATGATGAAGTGTT 59.525 41.667 0.00 0.00 0.00 3.32
408 420 2.623418 TACTGTGACTGTGAGGGGAT 57.377 50.000 5.32 0.00 0.00 3.85
425 437 8.414003 GTTGGGATCTCATAAAAAGGGATTTAC 58.586 37.037 0.00 0.00 0.00 2.01
433 445 6.015519 TGGTGTTGTTGGGATCTCATAAAAAG 60.016 38.462 0.00 0.00 0.00 2.27
574 587 6.122277 TGGGAAGGCAAAGTATCTTATTCTG 58.878 40.000 0.00 0.00 0.00 3.02
629 642 4.214332 GCTTGGTCAGTTAGAGAAGTTTGG 59.786 45.833 0.00 0.00 0.00 3.28
643 656 9.573133 CCAAGTTATTTTTATAAGCTTGGTCAG 57.427 33.333 9.86 6.02 38.57 3.51
663 676 6.777580 ACACAAGATCCTTTATGAACCAAGTT 59.222 34.615 0.00 0.00 0.00 2.66
731 750 9.893305 ATGTAAAAAGAAGAATAAGTTTGACCG 57.107 29.630 0.00 0.00 0.00 4.79
759 1018 6.852664 AGAAGGAAAGTAATTAATGCCAACG 58.147 36.000 7.54 0.00 0.00 4.10
901 1162 7.968246 AGACTTGTAATCATCTTCAATGTTCG 58.032 34.615 0.00 0.00 0.00 3.95
931 1192 0.586319 GCTGTTGCACGCTCAACTTA 59.414 50.000 17.52 2.43 44.83 2.24
947 1209 2.479275 CACAAGTGAGTGTCATCAGCTG 59.521 50.000 7.63 7.63 34.83 4.24
979 1241 9.940166 CGTCATCAGATGATATGATTTCAAAAA 57.060 29.630 16.37 0.00 42.04 1.94
980 1242 9.328845 TCGTCATCAGATGATATGATTTCAAAA 57.671 29.630 16.37 0.00 42.04 2.44
981 1243 8.891671 TCGTCATCAGATGATATGATTTCAAA 57.108 30.769 16.37 0.00 42.04 2.69
1014 1276 3.125829 GTGCGAGAAGATCAGCAAATGAA 59.874 43.478 0.00 0.00 42.53 2.57
1121 1383 2.094182 CCTACTAGTTTCAGCTTCGCCA 60.094 50.000 0.00 0.00 0.00 5.69
1125 1387 2.541556 CCGCCTACTAGTTTCAGCTTC 58.458 52.381 0.00 0.00 0.00 3.86
1402 2260 1.208052 GTAGCAAGACATCCTCCAGCA 59.792 52.381 0.00 0.00 0.00 4.41
1462 2320 1.188219 AGACTCGCTGGACATGGTGT 61.188 55.000 0.00 0.00 0.00 4.16
1589 2447 2.872245 CGAAGGGAGTATTACGTACCGA 59.128 50.000 0.00 0.00 33.58 4.69
1603 2461 7.909485 AGACTTATATTTAGGAACGAAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
1604 2462 8.827677 CAAAGACTTATATTTAGGAACGAAGGG 58.172 37.037 0.00 0.00 0.00 3.95
1605 2463 8.336080 GCAAAGACTTATATTTAGGAACGAAGG 58.664 37.037 0.00 0.00 0.00 3.46
1606 2464 8.879759 TGCAAAGACTTATATTTAGGAACGAAG 58.120 33.333 0.00 0.00 0.00 3.79
1607 2465 8.780846 TGCAAAGACTTATATTTAGGAACGAA 57.219 30.769 0.00 0.00 0.00 3.85
1608 2466 8.255206 TCTGCAAAGACTTATATTTAGGAACGA 58.745 33.333 0.00 0.00 0.00 3.85
1609 2467 8.420374 TCTGCAAAGACTTATATTTAGGAACG 57.580 34.615 0.00 0.00 0.00 3.95
1610 2468 9.601217 TCTCTGCAAAGACTTATATTTAGGAAC 57.399 33.333 0.00 0.00 0.00 3.62
1617 2475 9.678260 AGTGAAATCTCTGCAAAGACTTATATT 57.322 29.630 0.00 0.00 0.00 1.28
1620 2478 9.107177 CATAGTGAAATCTCTGCAAAGACTTAT 57.893 33.333 0.00 0.00 0.00 1.73
1621 2479 8.314021 TCATAGTGAAATCTCTGCAAAGACTTA 58.686 33.333 0.00 0.00 0.00 2.24
1622 2480 7.164122 TCATAGTGAAATCTCTGCAAAGACTT 58.836 34.615 0.00 0.00 0.00 3.01
1623 2481 6.705302 TCATAGTGAAATCTCTGCAAAGACT 58.295 36.000 0.00 0.00 0.00 3.24
1624 2482 6.974932 TCATAGTGAAATCTCTGCAAAGAC 57.025 37.500 0.00 0.00 0.00 3.01
1625 2483 6.372659 GGTTCATAGTGAAATCTCTGCAAAGA 59.627 38.462 0.00 0.00 38.22 2.52
1626 2484 6.149973 TGGTTCATAGTGAAATCTCTGCAAAG 59.850 38.462 0.00 0.00 38.22 2.77
1627 2485 6.003326 TGGTTCATAGTGAAATCTCTGCAAA 58.997 36.000 0.00 0.00 38.22 3.68
1628 2486 5.412594 GTGGTTCATAGTGAAATCTCTGCAA 59.587 40.000 0.00 0.00 38.22 4.08
1629 2487 4.937620 GTGGTTCATAGTGAAATCTCTGCA 59.062 41.667 0.00 0.00 38.22 4.41
1630 2488 4.937620 TGTGGTTCATAGTGAAATCTCTGC 59.062 41.667 0.00 0.00 38.22 4.26
1631 2489 6.457934 GCATGTGGTTCATAGTGAAATCTCTG 60.458 42.308 0.00 0.00 38.22 3.35
1632 2490 5.587844 GCATGTGGTTCATAGTGAAATCTCT 59.412 40.000 0.00 0.00 38.22 3.10
1633 2491 5.503031 CGCATGTGGTTCATAGTGAAATCTC 60.503 44.000 0.00 0.00 38.22 2.75
1634 2492 4.333649 CGCATGTGGTTCATAGTGAAATCT 59.666 41.667 0.00 0.00 38.22 2.40
1635 2493 4.496341 CCGCATGTGGTTCATAGTGAAATC 60.496 45.833 17.59 0.00 38.22 2.17
1636 2494 3.378112 CCGCATGTGGTTCATAGTGAAAT 59.622 43.478 17.59 0.00 38.22 2.17
1637 2495 2.746904 CCGCATGTGGTTCATAGTGAAA 59.253 45.455 17.59 0.00 38.22 2.69
1638 2496 2.027653 TCCGCATGTGGTTCATAGTGAA 60.028 45.455 24.28 0.00 34.67 3.18
1639 2497 1.552792 TCCGCATGTGGTTCATAGTGA 59.447 47.619 24.28 0.00 34.67 3.41
1640 2498 2.022764 TCCGCATGTGGTTCATAGTG 57.977 50.000 24.28 0.00 34.67 2.74
1641 2499 2.092968 ACATCCGCATGTGGTTCATAGT 60.093 45.455 24.28 11.94 42.05 2.12
1642 2500 2.564771 ACATCCGCATGTGGTTCATAG 58.435 47.619 24.28 11.37 42.05 2.23
1643 2501 2.708216 ACATCCGCATGTGGTTCATA 57.292 45.000 24.28 5.61 42.05 2.15
1644 2502 2.708216 TACATCCGCATGTGGTTCAT 57.292 45.000 24.28 8.62 43.54 2.57
1645 2503 2.708216 ATACATCCGCATGTGGTTCA 57.292 45.000 24.28 6.41 43.54 3.18
1646 2504 5.720202 TCTATATACATCCGCATGTGGTTC 58.280 41.667 24.28 0.00 43.54 3.62
1647 2505 5.738619 TCTATATACATCCGCATGTGGTT 57.261 39.130 24.28 14.09 43.54 3.67
1648 2506 5.664457 CATCTATATACATCCGCATGTGGT 58.336 41.667 24.28 8.62 43.54 4.16
1649 2507 4.509230 GCATCTATATACATCCGCATGTGG 59.491 45.833 19.75 19.75 43.54 4.17
1650 2508 5.111293 TGCATCTATATACATCCGCATGTG 58.889 41.667 1.14 0.00 43.54 3.21
1651 2509 5.343307 TGCATCTATATACATCCGCATGT 57.657 39.130 0.00 0.00 45.73 3.21
1652 2510 6.856135 AATGCATCTATATACATCCGCATG 57.144 37.500 0.00 0.00 38.74 4.06
1653 2511 7.870509 AAAATGCATCTATATACATCCGCAT 57.129 32.000 0.00 0.00 40.37 4.73
1654 2512 8.257306 TCTAAAATGCATCTATATACATCCGCA 58.743 33.333 0.00 0.00 0.00 5.69
1655 2513 8.648557 TCTAAAATGCATCTATATACATCCGC 57.351 34.615 0.00 0.00 0.00 5.54
1656 2514 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
1666 2524 9.534565 GTGAATCTACACTCTAAAATGCATCTA 57.465 33.333 0.00 0.00 37.73 1.98
1667 2525 8.263640 AGTGAATCTACACTCTAAAATGCATCT 58.736 33.333 0.00 0.00 46.36 2.90
1668 2526 8.430801 AGTGAATCTACACTCTAAAATGCATC 57.569 34.615 0.00 0.00 46.36 3.91
1681 2539 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
1682 2540 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
1683 2541 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1684 2542 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1685 2543 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1686 2544 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1687 2545 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1688 2546 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1689 2547 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1690 2548 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1691 2549 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1692 2550 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
1693 2551 5.127194 AGAGACTACATACGGAGCAAAATGA 59.873 40.000 0.00 0.00 0.00 2.57
1694 2552 5.352284 AGAGACTACATACGGAGCAAAATG 58.648 41.667 0.00 0.00 0.00 2.32
1695 2553 5.599999 AGAGACTACATACGGAGCAAAAT 57.400 39.130 0.00 0.00 0.00 1.82
1696 2554 5.651139 ACTAGAGACTACATACGGAGCAAAA 59.349 40.000 0.00 0.00 0.00 2.44
1697 2555 5.066117 CACTAGAGACTACATACGGAGCAAA 59.934 44.000 0.00 0.00 0.00 3.68
1698 2556 4.575236 CACTAGAGACTACATACGGAGCAA 59.425 45.833 0.00 0.00 0.00 3.91
1699 2557 4.127907 CACTAGAGACTACATACGGAGCA 58.872 47.826 0.00 0.00 0.00 4.26
1700 2558 3.499157 CCACTAGAGACTACATACGGAGC 59.501 52.174 0.00 0.00 0.00 4.70
1701 2559 4.958509 TCCACTAGAGACTACATACGGAG 58.041 47.826 0.00 0.00 0.00 4.63
1702 2560 5.363562 TTCCACTAGAGACTACATACGGA 57.636 43.478 0.00 0.00 0.00 4.69
1703 2561 5.998981 AGATTCCACTAGAGACTACATACGG 59.001 44.000 0.00 0.00 0.00 4.02
1704 2562 6.932400 AGAGATTCCACTAGAGACTACATACG 59.068 42.308 0.00 0.00 0.00 3.06
1705 2563 9.953565 ATAGAGATTCCACTAGAGACTACATAC 57.046 37.037 0.00 0.00 0.00 2.39
1707 2565 8.890472 AGATAGAGATTCCACTAGAGACTACAT 58.110 37.037 0.00 0.00 0.00 2.29
1708 2566 8.270137 AGATAGAGATTCCACTAGAGACTACA 57.730 38.462 0.00 0.00 0.00 2.74
1709 2567 9.569122 AAAGATAGAGATTCCACTAGAGACTAC 57.431 37.037 0.00 0.00 0.00 2.73
1710 2568 9.787435 GAAAGATAGAGATTCCACTAGAGACTA 57.213 37.037 0.00 0.00 0.00 2.59
1711 2569 7.724061 GGAAAGATAGAGATTCCACTAGAGACT 59.276 40.741 0.00 0.00 41.80 3.24
1712 2570 7.039993 GGGAAAGATAGAGATTCCACTAGAGAC 60.040 44.444 0.00 0.00 43.56 3.36
1713 2571 7.007723 GGGAAAGATAGAGATTCCACTAGAGA 58.992 42.308 0.00 0.00 43.56 3.10
1714 2572 7.010160 AGGGAAAGATAGAGATTCCACTAGAG 58.990 42.308 0.00 0.00 43.56 2.43
1715 2573 6.928202 AGGGAAAGATAGAGATTCCACTAGA 58.072 40.000 0.00 0.00 43.56 2.43
1716 2574 7.947890 AGTAGGGAAAGATAGAGATTCCACTAG 59.052 40.741 6.16 0.00 43.56 2.57
1717 2575 7.827787 AGTAGGGAAAGATAGAGATTCCACTA 58.172 38.462 6.16 3.06 43.56 2.74
1718 2576 6.688554 AGTAGGGAAAGATAGAGATTCCACT 58.311 40.000 6.16 3.86 43.56 4.00
1719 2577 6.987403 AGTAGGGAAAGATAGAGATTCCAC 57.013 41.667 6.16 0.00 43.56 4.02
1725 2583 9.656323 TGCTTTATTAGTAGGGAAAGATAGAGA 57.344 33.333 0.00 0.00 31.83 3.10
1726 2584 9.699703 GTGCTTTATTAGTAGGGAAAGATAGAG 57.300 37.037 0.00 0.00 31.83 2.43
1727 2585 8.358148 CGTGCTTTATTAGTAGGGAAAGATAGA 58.642 37.037 0.00 0.00 31.83 1.98
1728 2586 7.599245 CCGTGCTTTATTAGTAGGGAAAGATAG 59.401 40.741 0.00 0.00 44.42 2.08
1770 2628 3.881780 TTTGTAAAACGACCATGACGG 57.118 42.857 14.47 0.00 42.50 4.79
1794 2653 5.930837 TGAATTCTCACAAACAAAGGGTT 57.069 34.783 7.05 0.00 42.98 4.11
1795 2654 5.395214 GGTTGAATTCTCACAAACAAAGGGT 60.395 40.000 7.05 0.00 34.36 4.34
1801 2660 2.034053 GCGGGTTGAATTCTCACAAACA 59.966 45.455 7.05 0.00 35.69 2.83
1806 2665 1.464997 GACTGCGGGTTGAATTCTCAC 59.535 52.381 7.05 3.55 0.00 3.51
1823 2682 8.674173 TCTCAGATATCCACTTAAGATAGGACT 58.326 37.037 10.09 4.70 32.04 3.85
1831 2690 8.480643 AACGTTTTCTCAGATATCCACTTAAG 57.519 34.615 0.00 0.00 0.00 1.85
1976 2863 1.123928 CCCCTTCGCTGTCTCCTATT 58.876 55.000 0.00 0.00 0.00 1.73
1977 2864 0.032017 ACCCCTTCGCTGTCTCCTAT 60.032 55.000 0.00 0.00 0.00 2.57
2220 3109 3.626924 GGACCCGCCGGCATCTAT 61.627 66.667 28.98 6.28 0.00 1.98
2360 3289 0.701147 CCCCTCCCTTTCTTCAGCTT 59.299 55.000 0.00 0.00 0.00 3.74
2440 3378 3.285371 GACATGGGTCGGTCTCGT 58.715 61.111 0.00 0.00 37.69 4.18
2523 3461 2.169769 TCAACTGTTCGTGACCTTCCTT 59.830 45.455 0.00 0.00 0.00 3.36
2715 3659 3.051210 CACCGACAGCCACTCTCA 58.949 61.111 0.00 0.00 0.00 3.27
2788 3736 3.474570 GATGGCTGCTCCCCTCGT 61.475 66.667 0.00 0.00 0.00 4.18
2904 3853 2.765807 CCACCCTCTCCGCTCCAT 60.766 66.667 0.00 0.00 0.00 3.41
3092 6952 5.548406 GTTAGCTGGTCTAGAAGAAACCAA 58.452 41.667 0.00 0.00 42.28 3.67
3125 6985 6.858993 CACGCTAGTCTAAAGATAAAGCTAGG 59.141 42.308 0.00 0.00 0.00 3.02
3265 7130 8.498358 CATGATGGATTCGAAGATTTTTATCGA 58.502 33.333 3.35 0.00 43.18 3.59
3282 7147 4.769688 TCTAACACTTTCGCATGATGGAT 58.230 39.130 0.00 0.00 0.00 3.41
3290 7155 4.752604 TGTAAATGCTCTAACACTTTCGCA 59.247 37.500 0.00 0.00 0.00 5.10
3316 7181 5.682659 CTTGAGATGGATTGAAGATGTCCT 58.317 41.667 0.00 0.00 33.15 3.85
3339 7204 0.802494 CCAACCATTCACCTGTACGC 59.198 55.000 0.00 0.00 0.00 4.42
3343 7208 1.494721 AGTGACCAACCATTCACCTGT 59.505 47.619 0.00 0.00 42.73 4.00
3352 7217 0.468226 GACCTGTCAGTGACCAACCA 59.532 55.000 20.43 0.41 0.00 3.67
3384 7249 0.035820 ATTTTAGGCGCCCGTCTGAA 60.036 50.000 26.15 10.26 0.00 3.02
3399 7264 2.499693 CCGGGCATTTAAGACCCATTTT 59.500 45.455 0.00 0.00 44.49 1.82
3531 7402 1.971505 TTTGGCGAGCGGATGGAGAT 61.972 55.000 0.00 0.00 0.00 2.75
3556 7427 3.090037 GAGTGGAGTGAAGTGGCTAGTA 58.910 50.000 0.00 0.00 0.00 1.82
3628 7516 7.120579 TCTCCATGTATGTATGGTGTTTGTTTC 59.879 37.037 9.17 0.00 46.23 2.78
3629 7517 6.945435 TCTCCATGTATGTATGGTGTTTGTTT 59.055 34.615 9.17 0.00 46.23 2.83
3630 7518 6.480763 TCTCCATGTATGTATGGTGTTTGTT 58.519 36.000 9.17 0.00 46.23 2.83
3631 7519 6.061022 TCTCCATGTATGTATGGTGTTTGT 57.939 37.500 9.17 0.00 46.23 2.83
3632 7520 6.823182 TCTTCTCCATGTATGTATGGTGTTTG 59.177 38.462 9.17 4.12 46.23 2.93
3633 7521 6.957631 TCTTCTCCATGTATGTATGGTGTTT 58.042 36.000 9.17 0.00 46.23 2.83
3634 7522 6.560003 TCTTCTCCATGTATGTATGGTGTT 57.440 37.500 9.17 0.00 46.23 3.32
3635 7523 6.560003 TTCTTCTCCATGTATGTATGGTGT 57.440 37.500 9.17 0.00 46.23 4.16
3684 7572 0.516877 CGTGTGCCCTAACATGTGTG 59.483 55.000 0.00 0.00 33.26 3.82
4433 9275 7.231317 ACACCATCACAAGTGAATTTCTAATGT 59.769 33.333 7.02 1.77 43.58 2.71
4464 9307 1.302832 CCCCTCACACTTGCCACTC 60.303 63.158 0.00 0.00 0.00 3.51
4581 9425 6.348786 CCATGTTATTGCTTATCCTCATTCCG 60.349 42.308 0.00 0.00 0.00 4.30
5209 13625 1.605232 CATGATTAGCTTGCGATGCCA 59.395 47.619 0.00 0.00 0.00 4.92
5263 13680 2.674033 TCCATGACGTCGACGGGT 60.674 61.111 37.89 21.38 44.95 5.28
5274 13691 1.375908 GTTCGCTGGTGCTCCATGA 60.376 57.895 8.18 6.86 43.43 3.07
5345 13762 3.261250 CAGAGTTGCATCTTGGCCT 57.739 52.632 3.32 0.00 0.00 5.19
5411 13828 2.445654 GAGAGGGAGAGGCTGGGG 60.446 72.222 0.00 0.00 0.00 4.96
5975 14394 1.003696 GGAAGAAAGGTCCCAGTCTGG 59.996 57.143 12.40 12.40 37.25 3.86
6074 14493 2.982488 AGACCTCCATTTATGCCCTAGG 59.018 50.000 0.06 0.06 0.00 3.02
6075 14494 4.223923 CCTAGACCTCCATTTATGCCCTAG 59.776 50.000 0.00 0.00 0.00 3.02
6076 14495 4.168101 CCTAGACCTCCATTTATGCCCTA 58.832 47.826 0.00 0.00 0.00 3.53
6077 14496 2.982488 CCTAGACCTCCATTTATGCCCT 59.018 50.000 0.00 0.00 0.00 5.19
6078 14497 2.553247 GCCTAGACCTCCATTTATGCCC 60.553 54.545 0.00 0.00 0.00 5.36
6079 14498 2.106511 TGCCTAGACCTCCATTTATGCC 59.893 50.000 0.00 0.00 0.00 4.40
6080 14499 3.406764 CTGCCTAGACCTCCATTTATGC 58.593 50.000 0.00 0.00 0.00 3.14
6081 14500 3.244700 CCCTGCCTAGACCTCCATTTATG 60.245 52.174 0.00 0.00 0.00 1.90
6082 14501 2.982488 CCCTGCCTAGACCTCCATTTAT 59.018 50.000 0.00 0.00 0.00 1.40
6083 14502 2.408565 CCCTGCCTAGACCTCCATTTA 58.591 52.381 0.00 0.00 0.00 1.40
6084 14503 1.216990 CCCTGCCTAGACCTCCATTT 58.783 55.000 0.00 0.00 0.00 2.32
6085 14504 1.348775 GCCCTGCCTAGACCTCCATT 61.349 60.000 0.00 0.00 0.00 3.16
6086 14505 1.768077 GCCCTGCCTAGACCTCCAT 60.768 63.158 0.00 0.00 0.00 3.41
6087 14506 2.365635 GCCCTGCCTAGACCTCCA 60.366 66.667 0.00 0.00 0.00 3.86
6088 14507 1.977293 CTTGCCCTGCCTAGACCTCC 61.977 65.000 0.00 0.00 0.00 4.30
6089 14508 1.524482 CTTGCCCTGCCTAGACCTC 59.476 63.158 0.00 0.00 0.00 3.85
6090 14509 2.674220 GCTTGCCCTGCCTAGACCT 61.674 63.158 0.00 0.00 0.00 3.85
6091 14510 2.124529 GCTTGCCCTGCCTAGACC 60.125 66.667 0.00 0.00 0.00 3.85
6092 14511 1.002134 TTGCTTGCCCTGCCTAGAC 60.002 57.895 0.00 0.00 0.00 2.59
6093 14512 1.300963 CTTGCTTGCCCTGCCTAGA 59.699 57.895 0.00 0.00 0.00 2.43
6094 14513 1.751927 CCTTGCTTGCCCTGCCTAG 60.752 63.158 0.00 0.00 0.00 3.02
6095 14514 1.788518 TTCCTTGCTTGCCCTGCCTA 61.789 55.000 0.00 0.00 0.00 3.93
6096 14515 2.451462 ATTCCTTGCTTGCCCTGCCT 62.451 55.000 0.00 0.00 0.00 4.75
6097 14516 1.547472 AATTCCTTGCTTGCCCTGCC 61.547 55.000 0.00 0.00 0.00 4.85
6098 14517 0.390735 CAATTCCTTGCTTGCCCTGC 60.391 55.000 0.00 0.00 0.00 4.85
6099 14518 3.826637 CAATTCCTTGCTTGCCCTG 57.173 52.632 0.00 0.00 0.00 4.45
6108 14527 1.478105 GCTTGGGTAGGCAATTCCTTG 59.522 52.381 2.37 0.00 44.75 3.61
6109 14528 1.077005 TGCTTGGGTAGGCAATTCCTT 59.923 47.619 2.37 0.00 44.75 3.36
6111 14530 1.478105 CTTGCTTGGGTAGGCAATTCC 59.522 52.381 0.00 0.00 45.47 3.01
6112 14531 2.446435 TCTTGCTTGGGTAGGCAATTC 58.554 47.619 0.00 0.00 45.47 2.17
6113 14532 2.603075 TCTTGCTTGGGTAGGCAATT 57.397 45.000 0.00 0.00 45.47 2.32
6114 14533 2.603075 TTCTTGCTTGGGTAGGCAAT 57.397 45.000 0.00 0.00 45.47 3.56
6115 14534 2.373335 TTTCTTGCTTGGGTAGGCAA 57.627 45.000 0.00 0.00 44.64 4.52
6116 14535 2.224992 TGATTTCTTGCTTGGGTAGGCA 60.225 45.455 0.00 0.00 36.62 4.75
6117 14536 2.446435 TGATTTCTTGCTTGGGTAGGC 58.554 47.619 0.00 0.00 0.00 3.93
6118 14537 3.181483 GCATGATTTCTTGCTTGGGTAGG 60.181 47.826 10.28 0.00 41.90 3.18
6119 14538 3.444742 TGCATGATTTCTTGCTTGGGTAG 59.555 43.478 16.42 0.00 44.41 3.18
6120 14539 3.429492 TGCATGATTTCTTGCTTGGGTA 58.571 40.909 16.42 0.00 44.41 3.69
6121 14540 2.250031 TGCATGATTTCTTGCTTGGGT 58.750 42.857 16.42 0.00 44.41 4.51
6122 14541 3.118920 TGATGCATGATTTCTTGCTTGGG 60.119 43.478 2.46 0.00 44.41 4.12
6123 14542 4.118093 TGATGCATGATTTCTTGCTTGG 57.882 40.909 2.46 0.00 44.41 3.61
6124 14543 7.569408 GCAATATGATGCATGATTTCTTGCTTG 60.569 37.037 21.87 12.62 45.70 4.01
6125 14544 6.423905 GCAATATGATGCATGATTTCTTGCTT 59.576 34.615 21.87 11.59 45.70 3.91
6126 14545 5.926542 GCAATATGATGCATGATTTCTTGCT 59.073 36.000 21.87 5.46 45.70 3.91
6127 14546 6.153212 GCAATATGATGCATGATTTCTTGC 57.847 37.500 17.86 17.86 45.70 4.01
6138 14557 6.487331 TTGACATATCAGTGCAATATGATGCA 59.513 34.615 19.18 12.52 44.27 3.96
6139 14558 6.490566 TGACATATCAGTGCAATATGATGC 57.509 37.500 19.18 10.77 46.58 3.91
6140 14559 9.341899 CATTTGACATATCAGTGCAATATGATG 57.658 33.333 19.18 10.57 38.73 3.07
6141 14560 9.074576 ACATTTGACATATCAGTGCAATATGAT 57.925 29.630 19.18 16.16 38.73 2.45
6142 14561 8.347035 CACATTTGACATATCAGTGCAATATGA 58.653 33.333 19.18 10.93 38.73 2.15
6143 14562 8.132995 ACACATTTGACATATCAGTGCAATATG 58.867 33.333 13.11 13.11 41.07 1.78
6144 14563 8.229253 ACACATTTGACATATCAGTGCAATAT 57.771 30.769 0.00 0.00 33.77 1.28
6145 14564 7.628769 ACACATTTGACATATCAGTGCAATA 57.371 32.000 0.00 0.00 33.77 1.90
6146 14565 6.519679 ACACATTTGACATATCAGTGCAAT 57.480 33.333 0.00 0.00 33.77 3.56
6147 14566 5.963176 ACACATTTGACATATCAGTGCAA 57.037 34.783 0.00 0.00 33.77 4.08
6148 14567 5.963176 AACACATTTGACATATCAGTGCA 57.037 34.783 0.00 0.00 33.77 4.57
6165 14584 9.599866 CTGTCTACTTCATTGGAATATAACACA 57.400 33.333 0.00 0.00 31.34 3.72
6166 14585 9.601217 ACTGTCTACTTCATTGGAATATAACAC 57.399 33.333 0.00 0.00 31.34 3.32
6206 14625 9.255029 GGGTGTTGATATTATTTTAGGGCATAT 57.745 33.333 0.00 0.00 0.00 1.78
6207 14626 8.228206 TGGGTGTTGATATTATTTTAGGGCATA 58.772 33.333 0.00 0.00 0.00 3.14
6208 14627 7.072562 TGGGTGTTGATATTATTTTAGGGCAT 58.927 34.615 0.00 0.00 0.00 4.40
6209 14628 6.436027 TGGGTGTTGATATTATTTTAGGGCA 58.564 36.000 0.00 0.00 0.00 5.36
6210 14629 6.969993 TGGGTGTTGATATTATTTTAGGGC 57.030 37.500 0.00 0.00 0.00 5.19
6241 14660 9.344772 TGGTTTTACTTGTAGTGTATTTGTGAT 57.655 29.630 0.00 0.00 0.00 3.06
6242 14661 8.734218 TGGTTTTACTTGTAGTGTATTTGTGA 57.266 30.769 0.00 0.00 0.00 3.58
6243 14662 9.959749 ATTGGTTTTACTTGTAGTGTATTTGTG 57.040 29.630 0.00 0.00 0.00 3.33
6250 14669 8.938906 CGGTAATATTGGTTTTACTTGTAGTGT 58.061 33.333 0.00 0.00 0.00 3.55
6251 14670 7.906527 GCGGTAATATTGGTTTTACTTGTAGTG 59.093 37.037 0.00 0.00 0.00 2.74
6252 14671 7.066163 GGCGGTAATATTGGTTTTACTTGTAGT 59.934 37.037 0.00 0.00 0.00 2.73
6253 14672 7.281549 AGGCGGTAATATTGGTTTTACTTGTAG 59.718 37.037 0.00 0.00 0.00 2.74
6254 14673 7.111466 AGGCGGTAATATTGGTTTTACTTGTA 58.889 34.615 0.00 0.00 0.00 2.41
6255 14674 5.947566 AGGCGGTAATATTGGTTTTACTTGT 59.052 36.000 0.00 0.00 0.00 3.16
6256 14675 6.445357 AGGCGGTAATATTGGTTTTACTTG 57.555 37.500 0.00 0.00 0.00 3.16
6257 14676 6.769341 CCTAGGCGGTAATATTGGTTTTACTT 59.231 38.462 0.00 0.00 0.00 2.24
6258 14677 6.293698 CCTAGGCGGTAATATTGGTTTTACT 58.706 40.000 0.00 0.00 0.00 2.24
6259 14678 5.049198 GCCTAGGCGGTAATATTGGTTTTAC 60.049 44.000 20.16 0.00 34.25 2.01
6260 14679 5.065235 GCCTAGGCGGTAATATTGGTTTTA 58.935 41.667 20.16 0.00 34.25 1.52
6261 14680 3.887110 GCCTAGGCGGTAATATTGGTTTT 59.113 43.478 20.16 0.00 34.25 2.43
6262 14681 3.483421 GCCTAGGCGGTAATATTGGTTT 58.517 45.455 20.16 0.00 34.25 3.27
6263 14682 2.224695 GGCCTAGGCGGTAATATTGGTT 60.225 50.000 27.24 0.00 43.06 3.67
6264 14683 1.350019 GGCCTAGGCGGTAATATTGGT 59.650 52.381 27.24 0.00 43.06 3.67
6265 14684 1.349688 TGGCCTAGGCGGTAATATTGG 59.650 52.381 27.24 0.00 43.06 3.16
6266 14685 2.423577 GTGGCCTAGGCGGTAATATTG 58.576 52.381 27.24 0.00 43.06 1.90
6267 14686 1.001633 CGTGGCCTAGGCGGTAATATT 59.998 52.381 27.24 0.00 43.06 1.28
6268 14687 0.606604 CGTGGCCTAGGCGGTAATAT 59.393 55.000 27.24 0.00 43.06 1.28
6269 14688 2.043625 CGTGGCCTAGGCGGTAATA 58.956 57.895 27.24 6.52 43.06 0.98
6270 14689 2.819550 CGTGGCCTAGGCGGTAAT 59.180 61.111 27.24 0.00 43.06 1.89
6271 14690 4.151582 GCGTGGCCTAGGCGGTAA 62.152 66.667 27.24 10.19 43.06 2.85
6282 14701 2.925162 CTAAGCACCCTAGGCGTGGC 62.925 65.000 23.67 17.76 36.08 5.01
6283 14702 1.144057 CTAAGCACCCTAGGCGTGG 59.856 63.158 23.67 6.83 36.08 4.94
6284 14703 1.144057 CCTAAGCACCCTAGGCGTG 59.856 63.158 20.25 20.25 36.08 5.34
6285 14704 2.732619 GCCTAAGCACCCTAGGCGT 61.733 63.158 2.05 0.00 45.61 5.68
6286 14705 2.109181 GCCTAAGCACCCTAGGCG 59.891 66.667 2.05 0.00 45.61 5.52
6302 14721 2.107141 CTAGTGCCTAGGCGGTGC 59.893 66.667 28.28 17.54 45.51 5.01
6303 14722 2.815308 CCTAGTGCCTAGGCGGTG 59.185 66.667 28.28 17.21 45.64 4.94
6309 14728 1.068250 GCCTTCGCCTAGTGCCTAG 59.932 63.158 3.06 3.06 36.24 3.02
6310 14729 3.217231 GCCTTCGCCTAGTGCCTA 58.783 61.111 0.00 0.00 36.24 3.93
6326 14745 3.497031 GTAAGCGAGGCGGTTGGC 61.497 66.667 13.64 4.02 46.80 4.52
6327 14746 3.186047 CGTAAGCGAGGCGGTTGG 61.186 66.667 13.64 3.06 46.80 3.77
6344 14763 0.242825 GGTTGGAAAAAGCGGTAGGC 59.757 55.000 0.00 0.00 44.05 3.93
6345 14764 1.905637 AGGTTGGAAAAAGCGGTAGG 58.094 50.000 0.00 0.00 0.00 3.18
6346 14765 2.882137 TCAAGGTTGGAAAAAGCGGTAG 59.118 45.455 0.00 0.00 0.00 3.18
6347 14766 2.882137 CTCAAGGTTGGAAAAAGCGGTA 59.118 45.455 0.00 0.00 0.00 4.02
6348 14767 1.681264 CTCAAGGTTGGAAAAAGCGGT 59.319 47.619 0.00 0.00 0.00 5.68
6349 14768 1.681264 ACTCAAGGTTGGAAAAAGCGG 59.319 47.619 0.00 0.00 0.00 5.52
6350 14769 2.099098 ACACTCAAGGTTGGAAAAAGCG 59.901 45.455 0.00 0.00 0.00 4.68
6351 14770 3.801114 ACACTCAAGGTTGGAAAAAGC 57.199 42.857 0.00 0.00 0.00 3.51
6352 14771 5.359860 AGGTTACACTCAAGGTTGGAAAAAG 59.640 40.000 0.00 0.00 0.00 2.27
6353 14772 5.265989 AGGTTACACTCAAGGTTGGAAAAA 58.734 37.500 0.00 0.00 0.00 1.94
6354 14773 4.862371 AGGTTACACTCAAGGTTGGAAAA 58.138 39.130 0.00 0.00 0.00 2.29
6355 14774 4.513406 AGGTTACACTCAAGGTTGGAAA 57.487 40.909 0.00 0.00 0.00 3.13
6356 14775 4.513406 AAGGTTACACTCAAGGTTGGAA 57.487 40.909 0.00 0.00 0.00 3.53
6357 14776 5.546499 AGATAAGGTTACACTCAAGGTTGGA 59.454 40.000 0.00 0.00 0.00 3.53
6358 14777 5.805728 AGATAAGGTTACACTCAAGGTTGG 58.194 41.667 0.00 0.00 0.00 3.77
6359 14778 7.444183 TCAAAGATAAGGTTACACTCAAGGTTG 59.556 37.037 0.00 0.00 0.00 3.77
6360 14779 7.444487 GTCAAAGATAAGGTTACACTCAAGGTT 59.556 37.037 0.00 0.00 0.00 3.50
6361 14780 6.935208 GTCAAAGATAAGGTTACACTCAAGGT 59.065 38.462 0.00 0.00 0.00 3.50
6362 14781 6.090898 CGTCAAAGATAAGGTTACACTCAAGG 59.909 42.308 0.00 0.00 0.00 3.61
6363 14782 6.645415 ACGTCAAAGATAAGGTTACACTCAAG 59.355 38.462 0.00 0.00 0.00 3.02
6364 14783 6.518493 ACGTCAAAGATAAGGTTACACTCAA 58.482 36.000 0.00 0.00 0.00 3.02
6365 14784 6.092955 ACGTCAAAGATAAGGTTACACTCA 57.907 37.500 0.00 0.00 0.00 3.41
6366 14785 7.042254 ACAAACGTCAAAGATAAGGTTACACTC 60.042 37.037 0.00 0.00 0.00 3.51
6367 14786 6.764560 ACAAACGTCAAAGATAAGGTTACACT 59.235 34.615 0.00 0.00 0.00 3.55
6368 14787 6.951643 ACAAACGTCAAAGATAAGGTTACAC 58.048 36.000 0.00 0.00 0.00 2.90
6369 14788 8.659925 TTACAAACGTCAAAGATAAGGTTACA 57.340 30.769 0.00 0.00 0.00 2.41
6370 14789 9.934190 TTTTACAAACGTCAAAGATAAGGTTAC 57.066 29.630 0.00 0.00 0.00 2.50
6372 14791 8.680001 ACTTTTACAAACGTCAAAGATAAGGTT 58.320 29.630 6.33 0.00 33.28 3.50
6373 14792 8.217131 ACTTTTACAAACGTCAAAGATAAGGT 57.783 30.769 6.33 0.00 33.28 3.50
6374 14793 8.953990 CAACTTTTACAAACGTCAAAGATAAGG 58.046 33.333 6.33 0.00 33.28 2.69
6375 14794 8.953990 CCAACTTTTACAAACGTCAAAGATAAG 58.046 33.333 6.33 0.00 33.28 1.73
6376 14795 8.675504 TCCAACTTTTACAAACGTCAAAGATAA 58.324 29.630 6.33 0.00 33.28 1.75
6377 14796 8.211116 TCCAACTTTTACAAACGTCAAAGATA 57.789 30.769 6.33 0.00 33.28 1.98
6378 14797 7.090953 TCCAACTTTTACAAACGTCAAAGAT 57.909 32.000 6.33 0.00 33.28 2.40
6379 14798 6.497785 TCCAACTTTTACAAACGTCAAAGA 57.502 33.333 6.33 0.00 33.28 2.52
6380 14799 7.749539 AATCCAACTTTTACAAACGTCAAAG 57.250 32.000 0.00 0.00 34.93 2.77
6381 14800 9.635520 TTTAATCCAACTTTTACAAACGTCAAA 57.364 25.926 0.00 0.00 0.00 2.69
6382 14801 9.635520 TTTTAATCCAACTTTTACAAACGTCAA 57.364 25.926 0.00 0.00 0.00 3.18
6383 14802 9.635520 TTTTTAATCCAACTTTTACAAACGTCA 57.364 25.926 0.00 0.00 0.00 4.35
6406 14825 3.740321 CGTGCCATTATGCAACACTTTTT 59.260 39.130 0.00 0.00 44.11 1.94
6407 14826 3.243704 ACGTGCCATTATGCAACACTTTT 60.244 39.130 0.00 0.00 44.11 2.27
6408 14827 2.295909 ACGTGCCATTATGCAACACTTT 59.704 40.909 0.00 0.00 44.11 2.66
6409 14828 1.885887 ACGTGCCATTATGCAACACTT 59.114 42.857 0.00 0.00 44.11 3.16
6410 14829 1.199789 CACGTGCCATTATGCAACACT 59.800 47.619 0.82 0.00 44.11 3.55
6411 14830 1.616620 CACGTGCCATTATGCAACAC 58.383 50.000 0.82 0.00 44.11 3.32
6412 14831 0.525311 CCACGTGCCATTATGCAACA 59.475 50.000 10.91 0.00 44.11 3.33
6413 14832 0.808125 TCCACGTGCCATTATGCAAC 59.192 50.000 10.91 0.00 44.11 4.17
6414 14833 1.093972 CTCCACGTGCCATTATGCAA 58.906 50.000 10.91 0.00 44.11 4.08
6415 14834 1.375853 GCTCCACGTGCCATTATGCA 61.376 55.000 10.91 0.00 39.37 3.96
6416 14835 1.356624 GCTCCACGTGCCATTATGC 59.643 57.895 10.91 2.19 0.00 3.14
6417 14836 1.064505 CTTGCTCCACGTGCCATTATG 59.935 52.381 10.91 0.00 0.00 1.90
6418 14837 1.340017 ACTTGCTCCACGTGCCATTAT 60.340 47.619 10.91 0.00 0.00 1.28
6419 14838 0.036164 ACTTGCTCCACGTGCCATTA 59.964 50.000 10.91 0.00 0.00 1.90
6420 14839 0.823356 AACTTGCTCCACGTGCCATT 60.823 50.000 10.91 0.00 0.00 3.16
6421 14840 0.036164 TAACTTGCTCCACGTGCCAT 59.964 50.000 10.91 0.00 0.00 4.40
6422 14841 0.036164 ATAACTTGCTCCACGTGCCA 59.964 50.000 10.91 3.75 0.00 4.92
6423 14842 2.018542 TATAACTTGCTCCACGTGCC 57.981 50.000 10.91 0.80 0.00 5.01
6424 14843 4.616181 AAATATAACTTGCTCCACGTGC 57.384 40.909 10.91 0.00 0.00 5.34
6430 14849 9.556030 GGCGAAATATTAAATATAACTTGCTCC 57.444 33.333 0.00 0.00 0.00 4.70
6431 14850 9.556030 GGGCGAAATATTAAATATAACTTGCTC 57.444 33.333 0.00 0.00 0.00 4.26
6432 14851 8.234546 CGGGCGAAATATTAAATATAACTTGCT 58.765 33.333 0.00 0.00 0.00 3.91
6433 14852 7.483691 CCGGGCGAAATATTAAATATAACTTGC 59.516 37.037 0.00 0.00 0.00 4.01
6434 14853 8.508875 ACCGGGCGAAATATTAAATATAACTTG 58.491 33.333 6.32 0.00 0.00 3.16
6435 14854 8.508875 CACCGGGCGAAATATTAAATATAACTT 58.491 33.333 6.32 0.00 0.00 2.66
6436 14855 7.361457 GCACCGGGCGAAATATTAAATATAACT 60.361 37.037 6.32 0.00 0.00 2.24
6437 14856 6.744082 GCACCGGGCGAAATATTAAATATAAC 59.256 38.462 6.32 0.00 0.00 1.89
6438 14857 6.844254 GCACCGGGCGAAATATTAAATATAA 58.156 36.000 6.32 0.00 0.00 0.98
6439 14858 6.425577 GCACCGGGCGAAATATTAAATATA 57.574 37.500 6.32 0.00 0.00 0.86
6440 14859 5.305139 GCACCGGGCGAAATATTAAATAT 57.695 39.130 6.32 0.00 0.00 1.28
6441 14860 4.752661 GCACCGGGCGAAATATTAAATA 57.247 40.909 6.32 0.00 0.00 1.40
6442 14861 3.636282 GCACCGGGCGAAATATTAAAT 57.364 42.857 6.32 0.00 0.00 1.40
6460 14879 3.144120 AAAATGCCCGTGCGTTGCA 62.144 52.632 0.00 8.11 45.88 4.08
6461 14880 2.355718 AAAATGCCCGTGCGTTGC 60.356 55.556 0.00 0.00 45.88 4.17
6462 14881 0.039978 TACAAAATGCCCGTGCGTTG 60.040 50.000 0.00 0.00 45.88 4.10
6464 14883 0.887387 AGTACAAAATGCCCGTGCGT 60.887 50.000 0.00 0.00 41.78 5.24
6465 14884 1.062002 CTAGTACAAAATGCCCGTGCG 59.938 52.381 0.00 0.00 41.78 5.34
6466 14885 2.081462 ACTAGTACAAAATGCCCGTGC 58.919 47.619 0.00 0.00 38.26 5.34
6467 14886 5.640357 TCTTTACTAGTACAAAATGCCCGTG 59.360 40.000 0.91 0.00 0.00 4.94
6468 14887 5.640783 GTCTTTACTAGTACAAAATGCCCGT 59.359 40.000 0.91 0.00 0.00 5.28
6469 14888 5.873164 AGTCTTTACTAGTACAAAATGCCCG 59.127 40.000 0.91 0.00 32.84 6.13
6470 14889 7.683437 AAGTCTTTACTAGTACAAAATGCCC 57.317 36.000 0.91 0.00 33.75 5.36
6486 14905 9.223099 CCCTCCGTTTCTAAATTTAAGTCTTTA 57.777 33.333 0.00 0.00 0.00 1.85
6487 14906 7.940688 TCCCTCCGTTTCTAAATTTAAGTCTTT 59.059 33.333 0.00 0.00 0.00 2.52
6488 14907 7.455891 TCCCTCCGTTTCTAAATTTAAGTCTT 58.544 34.615 0.00 0.00 0.00 3.01
6489 14908 7.012661 TCCCTCCGTTTCTAAATTTAAGTCT 57.987 36.000 0.00 0.00 0.00 3.24
6490 14909 6.877855 ACTCCCTCCGTTTCTAAATTTAAGTC 59.122 38.462 0.00 0.00 0.00 3.01
6491 14910 6.776744 ACTCCCTCCGTTTCTAAATTTAAGT 58.223 36.000 0.00 0.00 0.00 2.24
6492 14911 7.820872 TGTACTCCCTCCGTTTCTAAATTTAAG 59.179 37.037 0.00 0.00 0.00 1.85
6493 14912 7.678837 TGTACTCCCTCCGTTTCTAAATTTAA 58.321 34.615 0.00 0.00 0.00 1.52
6494 14913 7.243604 TGTACTCCCTCCGTTTCTAAATTTA 57.756 36.000 0.00 0.00 0.00 1.40
6495 14914 6.117975 TGTACTCCCTCCGTTTCTAAATTT 57.882 37.500 0.00 0.00 0.00 1.82
6496 14915 5.750352 TGTACTCCCTCCGTTTCTAAATT 57.250 39.130 0.00 0.00 0.00 1.82
6497 14916 5.952347 ATGTACTCCCTCCGTTTCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
6498 14917 6.211184 TGTTATGTACTCCCTCCGTTTCTAAA 59.789 38.462 0.00 0.00 0.00 1.85
6499 14918 5.716228 TGTTATGTACTCCCTCCGTTTCTAA 59.284 40.000 0.00 0.00 0.00 2.10
6500 14919 5.263599 TGTTATGTACTCCCTCCGTTTCTA 58.736 41.667 0.00 0.00 0.00 2.10
6501 14920 4.091549 TGTTATGTACTCCCTCCGTTTCT 58.908 43.478 0.00 0.00 0.00 2.52
6502 14921 4.460948 TGTTATGTACTCCCTCCGTTTC 57.539 45.455 0.00 0.00 0.00 2.78
6503 14922 4.468510 TCATGTTATGTACTCCCTCCGTTT 59.531 41.667 0.00 0.00 0.00 3.60
6504 14923 4.028131 TCATGTTATGTACTCCCTCCGTT 58.972 43.478 0.00 0.00 0.00 4.44
6505 14924 3.638860 TCATGTTATGTACTCCCTCCGT 58.361 45.455 0.00 0.00 0.00 4.69
6506 14925 4.873746 ATCATGTTATGTACTCCCTCCG 57.126 45.455 0.00 0.00 0.00 4.63
6507 14926 6.919775 ACTATCATGTTATGTACTCCCTCC 57.080 41.667 0.00 0.00 0.00 4.30
6508 14927 7.450634 TGGTACTATCATGTTATGTACTCCCTC 59.549 40.741 15.47 6.63 35.29 4.30
6509 14928 7.302948 TGGTACTATCATGTTATGTACTCCCT 58.697 38.462 15.47 0.00 35.29 4.20
6510 14929 7.450634 TCTGGTACTATCATGTTATGTACTCCC 59.549 40.741 15.47 7.12 35.29 4.30
6511 14930 8.298140 GTCTGGTACTATCATGTTATGTACTCC 58.702 40.741 15.47 7.52 35.29 3.85
6512 14931 8.847196 TGTCTGGTACTATCATGTTATGTACTC 58.153 37.037 15.47 10.46 35.29 2.59
6513 14932 8.630917 GTGTCTGGTACTATCATGTTATGTACT 58.369 37.037 15.47 0.00 35.29 2.73
6514 14933 7.866393 GGTGTCTGGTACTATCATGTTATGTAC 59.134 40.741 0.00 4.32 34.48 2.90
6515 14934 7.014905 GGGTGTCTGGTACTATCATGTTATGTA 59.985 40.741 0.00 0.00 0.00 2.29
6516 14935 6.183360 GGGTGTCTGGTACTATCATGTTATGT 60.183 42.308 0.00 0.00 0.00 2.29
6517 14936 6.223852 GGGTGTCTGGTACTATCATGTTATG 58.776 44.000 0.00 0.00 0.00 1.90
6518 14937 5.010719 CGGGTGTCTGGTACTATCATGTTAT 59.989 44.000 0.00 0.00 0.00 1.89
6519 14938 4.340097 CGGGTGTCTGGTACTATCATGTTA 59.660 45.833 0.00 0.00 0.00 2.41
6520 14939 3.132289 CGGGTGTCTGGTACTATCATGTT 59.868 47.826 0.00 0.00 0.00 2.71
6521 14940 2.693591 CGGGTGTCTGGTACTATCATGT 59.306 50.000 0.00 0.00 0.00 3.21
6522 14941 2.035961 CCGGGTGTCTGGTACTATCATG 59.964 54.545 0.00 0.00 34.69 3.07
6546 14965 5.163581 TGGTTACTTACGGATCAACTAGCTC 60.164 44.000 0.00 0.00 0.00 4.09
6567 14987 3.198635 CCATCACTCCATCAGTACTTGGT 59.801 47.826 12.38 0.00 32.21 3.67
6578 15000 1.285667 TCAACATGCCCATCACTCCAT 59.714 47.619 0.00 0.00 0.00 3.41
6579 15001 0.697658 TCAACATGCCCATCACTCCA 59.302 50.000 0.00 0.00 0.00 3.86
6580 15002 1.474077 GTTCAACATGCCCATCACTCC 59.526 52.381 0.00 0.00 0.00 3.85
6581 15003 2.440409 AGTTCAACATGCCCATCACTC 58.560 47.619 0.00 0.00 0.00 3.51
6582 15004 2.592102 AGTTCAACATGCCCATCACT 57.408 45.000 0.00 0.00 0.00 3.41
6948 15371 0.807667 CGATGAGCTGGGTGTACTGC 60.808 60.000 0.00 0.00 35.79 4.40
7296 16186 1.678598 CCCGGCCGACATAGTTGGTA 61.679 60.000 30.73 0.00 39.22 3.25
7341 16231 1.078848 GCGTGGGCTCATGAAGTCT 60.079 57.895 10.85 0.00 35.83 3.24
7362 16252 2.202932 CGCGCCCAGTATTCAGCT 60.203 61.111 0.00 0.00 0.00 4.24
7368 16258 1.115930 AGATCTTCCGCGCCCAGTAT 61.116 55.000 0.00 0.00 0.00 2.12
7554 16444 2.543777 ACACGCCATTGAAGTGTACT 57.456 45.000 13.02 0.00 45.92 2.73
7668 16558 1.638467 GATGAATGTGGCGCGACTC 59.362 57.895 23.24 11.26 0.00 3.36
7680 16570 4.609018 CGCCCCGAGCCGATGAAT 62.609 66.667 0.00 0.00 38.78 2.57
8049 16939 4.729370 TCCTGAGGATAGGAGAAGAAGAGA 59.271 45.833 0.00 0.00 41.85 3.10
8343 17239 1.227823 CACAAGGAGGTGGAACGCA 60.228 57.895 0.00 0.00 43.02 5.24
8475 17371 1.811778 TGATGCCCTTGCTATCCTCT 58.188 50.000 0.00 0.00 38.71 3.69
8506 17402 2.174334 GCACCACATGCGAACTCAT 58.826 52.632 0.00 0.00 46.55 2.90
8543 17439 2.052690 CCGATGACCAGAGTCCGGT 61.053 63.158 0.00 0.00 42.81 5.28
8631 17527 2.598394 TTGGTGCTGGCTGCCTTC 60.598 61.111 21.03 11.70 42.00 3.46
8641 17537 4.988598 CGTGCGGGACTTGGTGCT 62.989 66.667 0.00 0.00 0.00 4.40
8655 17551 2.535984 GACGCTGAATACTCCATTCGTG 59.464 50.000 0.00 0.00 45.25 4.35
8685 17581 0.034059 GATTCCCGATGACCAGCGAT 59.966 55.000 9.36 0.00 43.75 4.58
8700 17596 3.794028 CGACCTTGATCTCGAACTGATTC 59.206 47.826 0.00 0.00 31.24 2.52
8703 17599 2.160205 ACGACCTTGATCTCGAACTGA 58.840 47.619 8.86 0.00 33.96 3.41
8795 17859 3.009473 ACAATGCATGAGAACTGGTAGGT 59.991 43.478 0.00 0.00 0.00 3.08
8839 17903 6.942576 AGGCATAAGAGTCACATAACAAAGTT 59.057 34.615 0.00 0.00 0.00 2.66
8841 17905 6.037610 GGAGGCATAAGAGTCACATAACAAAG 59.962 42.308 0.00 0.00 0.00 2.77
8842 17906 5.880332 GGAGGCATAAGAGTCACATAACAAA 59.120 40.000 0.00 0.00 0.00 2.83
8843 17907 5.189736 AGGAGGCATAAGAGTCACATAACAA 59.810 40.000 0.00 0.00 0.00 2.83
8844 17908 4.716784 AGGAGGCATAAGAGTCACATAACA 59.283 41.667 0.00 0.00 0.00 2.41
8845 17909 5.053145 CAGGAGGCATAAGAGTCACATAAC 58.947 45.833 0.00 0.00 0.00 1.89
8846 17910 4.716784 ACAGGAGGCATAAGAGTCACATAA 59.283 41.667 0.00 0.00 0.00 1.90
8847 17911 4.290093 ACAGGAGGCATAAGAGTCACATA 58.710 43.478 0.00 0.00 0.00 2.29
8848 17912 3.110705 ACAGGAGGCATAAGAGTCACAT 58.889 45.455 0.00 0.00 0.00 3.21
8849 17913 2.540383 ACAGGAGGCATAAGAGTCACA 58.460 47.619 0.00 0.00 0.00 3.58
8850 17914 4.586841 AGATACAGGAGGCATAAGAGTCAC 59.413 45.833 0.00 0.00 0.00 3.67
8851 17915 4.809193 AGATACAGGAGGCATAAGAGTCA 58.191 43.478 0.00 0.00 0.00 3.41
8852 17916 4.219725 GGAGATACAGGAGGCATAAGAGTC 59.780 50.000 0.00 0.00 0.00 3.36
8853 17917 4.140805 AGGAGATACAGGAGGCATAAGAGT 60.141 45.833 0.00 0.00 0.00 3.24
8854 17918 4.415596 AGGAGATACAGGAGGCATAAGAG 58.584 47.826 0.00 0.00 0.00 2.85
8855 17919 4.477536 AGGAGATACAGGAGGCATAAGA 57.522 45.455 0.00 0.00 0.00 2.10
8856 17920 4.709397 CCTAGGAGATACAGGAGGCATAAG 59.291 50.000 1.05 0.00 0.00 1.73
8857 17921 4.357097 TCCTAGGAGATACAGGAGGCATAA 59.643 45.833 7.62 0.00 33.48 1.90
8858 17922 3.923425 TCCTAGGAGATACAGGAGGCATA 59.077 47.826 7.62 0.00 33.48 3.14
8859 17923 2.724672 TCCTAGGAGATACAGGAGGCAT 59.275 50.000 7.62 0.00 33.48 4.40
8860 17924 2.144450 TCCTAGGAGATACAGGAGGCA 58.856 52.381 7.62 0.00 33.48 4.75
8861 17925 2.982339 TCCTAGGAGATACAGGAGGC 57.018 55.000 7.62 0.00 33.48 4.70
8862 17926 3.707316 CCATCCTAGGAGATACAGGAGG 58.293 54.545 18.34 3.99 41.65 4.30
8863 17927 3.096092 GCCATCCTAGGAGATACAGGAG 58.904 54.545 18.34 0.00 41.65 3.69
8864 17928 2.724672 AGCCATCCTAGGAGATACAGGA 59.275 50.000 18.34 0.00 42.52 3.86
8865 17929 3.182887 AGCCATCCTAGGAGATACAGG 57.817 52.381 18.34 12.19 0.00 4.00
8866 17930 4.704540 CACTAGCCATCCTAGGAGATACAG 59.295 50.000 18.34 13.20 46.44 2.74
8867 17931 4.667573 CACTAGCCATCCTAGGAGATACA 58.332 47.826 18.34 1.44 46.44 2.29
8868 17932 3.445805 GCACTAGCCATCCTAGGAGATAC 59.554 52.174 18.34 6.69 46.44 2.24
8869 17933 3.702792 GCACTAGCCATCCTAGGAGATA 58.297 50.000 18.34 6.72 46.44 1.98
8870 17934 2.534990 GCACTAGCCATCCTAGGAGAT 58.465 52.381 18.34 5.79 46.44 2.75
8871 17935 2.002505 GCACTAGCCATCCTAGGAGA 57.997 55.000 18.34 0.00 46.44 3.71
8990 18054 2.929477 TTTCGTTAGGGCCGGGGT 60.929 61.111 2.18 0.00 0.00 4.95
9172 18237 6.944290 TCTCAATTTGAACAACCTGATGATCT 59.056 34.615 0.01 0.00 0.00 2.75
9570 18640 6.339730 TCACTTTCACATGAGCAATTTGTTT 58.660 32.000 0.00 0.00 0.00 2.83
9580 18650 7.120285 ACACTAATGGAATCACTTTCACATGAG 59.880 37.037 0.00 0.00 35.94 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.