Multiple sequence alignment - TraesCS2B01G579800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G579800 chr2B 100.000 7420 0 0 1 7420 767658077 767650658 0.000000e+00 13703.0
1 TraesCS2B01G579800 chr2B 78.481 158 34 0 79 236 646977835 646977678 3.660000e-18 104.0
2 TraesCS2B01G579800 chr2B 100.000 29 0 0 479 507 32648517 32648545 4.000000e-03 54.7
3 TraesCS2B01G579800 chr2B 90.244 41 2 2 479 517 379105339 379105299 1.300000e-02 52.8
4 TraesCS2B01G579800 chr2D 93.323 2516 104 31 2512 5007 625522110 625519639 0.000000e+00 3657.0
5 TraesCS2B01G579800 chr2D 88.877 1897 128 39 5364 7229 625519446 625517602 0.000000e+00 2257.0
6 TraesCS2B01G579800 chr2D 94.268 785 35 5 1028 1810 625523522 625522746 0.000000e+00 1192.0
7 TraesCS2B01G579800 chr2D 95.455 704 23 4 1779 2479 625522811 625522114 0.000000e+00 1114.0
8 TraesCS2B01G579800 chr2D 100.000 269 0 0 969 1237 625523838 625523570 1.440000e-136 497.0
9 TraesCS2B01G579800 chr2D 94.969 159 3 2 812 965 625524086 625523928 2.070000e-60 244.0
10 TraesCS2B01G579800 chr2D 87.692 130 10 3 5057 5183 625519567 625519441 6.000000e-31 147.0
11 TraesCS2B01G579800 chr2D 100.000 33 0 0 7247 7279 625517550 625517518 2.240000e-05 62.1
12 TraesCS2B01G579800 chr2A 91.461 1698 71 26 3334 4991 756805816 756807479 0.000000e+00 2265.0
13 TraesCS2B01G579800 chr2A 87.879 1683 129 35 5073 6727 756807478 756809113 0.000000e+00 1908.0
14 TraesCS2B01G579800 chr2A 93.786 1046 57 5 1007 2049 756803601 756804641 0.000000e+00 1565.0
15 TraesCS2B01G579800 chr2A 85.965 1083 94 32 2206 3254 756804760 756805818 0.000000e+00 1105.0
16 TraesCS2B01G579800 chr2A 93.085 188 7 4 779 960 756803105 756803292 3.410000e-68 270.0
17 TraesCS2B01G579800 chr2A 84.980 253 19 7 6763 7011 756809175 756809412 9.620000e-59 239.0
18 TraesCS2B01G579800 chr2A 83.761 234 7 10 6996 7228 756810749 756810952 7.600000e-45 193.0
19 TraesCS2B01G579800 chr2A 95.312 64 3 0 1747 1810 756804372 756804435 1.320000e-17 102.0
20 TraesCS2B01G579800 chr1B 94.516 1240 51 10 3753 4991 307734298 307735521 0.000000e+00 1897.0
21 TraesCS2B01G579800 chr1B 91.932 409 22 3 318 715 119134201 119134609 5.030000e-156 562.0
22 TraesCS2B01G579800 chr1B 89.976 409 30 3 318 715 318992878 318993286 1.100000e-142 518.0
23 TraesCS2B01G579800 chr1B 93.189 323 21 1 1 322 119133766 119134088 2.420000e-129 473.0
24 TraesCS2B01G579800 chr1B 91.950 323 25 1 1 322 318992443 318992765 1.140000e-122 451.0
25 TraesCS2B01G579800 chr7A 93.434 396 15 2 331 715 170592723 170593118 1.800000e-160 577.0
26 TraesCS2B01G579800 chr7A 95.046 323 15 1 1 322 170592302 170592624 2.390000e-139 507.0
27 TraesCS2B01G579800 chr7A 77.044 318 62 5 317 623 636555011 636555328 9.900000e-39 172.0
28 TraesCS2B01G579800 chr7A 76.508 315 63 5 317 620 636312577 636312891 2.140000e-35 161.0
29 TraesCS2B01G579800 chr7B 82.801 407 62 4 317 715 81696857 81696451 2.550000e-94 357.0
30 TraesCS2B01G579800 chr7B 95.604 91 4 0 4990 5080 450586553 450586463 6.000000e-31 147.0
31 TraesCS2B01G579800 chr5A 86.032 315 43 1 1 314 698220761 698220447 3.320000e-88 337.0
32 TraesCS2B01G579800 chr7D 96.667 90 3 0 4989 5078 579751263 579751352 4.640000e-32 150.0
33 TraesCS2B01G579800 chr7D 96.591 88 3 0 4989 5076 602951478 602951565 6.000000e-31 147.0
34 TraesCS2B01G579800 chr7D 93.617 94 5 1 4989 5081 618983556 618983463 1.000000e-28 139.0
35 TraesCS2B01G579800 chr5D 92.381 105 7 1 4981 5084 223649987 223649883 1.670000e-31 148.0
36 TraesCS2B01G579800 chr4B 93.878 98 6 0 4986 5083 638146276 638146373 1.670000e-31 148.0
37 TraesCS2B01G579800 chr4B 96.591 88 3 0 4990 5077 607437506 607437419 6.000000e-31 147.0
38 TraesCS2B01G579800 chr3D 96.629 89 3 0 4989 5077 362238288 362238376 1.670000e-31 148.0
39 TraesCS2B01G579800 chr6A 91.837 98 6 2 4986 5081 605324787 605324690 1.300000e-27 135.0
40 TraesCS2B01G579800 chr4D 77.253 233 51 2 79 310 386202759 386202528 1.300000e-27 135.0
41 TraesCS2B01G579800 chr3B 85.227 88 11 2 223 309 530268584 530268498 1.030000e-13 89.8
42 TraesCS2B01G579800 chr1D 77.778 117 24 2 100 215 488494571 488494456 3.710000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G579800 chr2B 767650658 767658077 7419 True 13703.0000 13703 100.000000 1 7420 1 chr2B.!!$R3 7419
1 TraesCS2B01G579800 chr2D 625517518 625524086 6568 True 1146.2625 3657 94.323000 812 7279 8 chr2D.!!$R1 6467
2 TraesCS2B01G579800 chr2A 756803105 756810952 7847 False 955.8750 2265 89.528625 779 7228 8 chr2A.!!$F1 6449
3 TraesCS2B01G579800 chr1B 307734298 307735521 1223 False 1897.0000 1897 94.516000 3753 4991 1 chr1B.!!$F1 1238
4 TraesCS2B01G579800 chr1B 119133766 119134609 843 False 517.5000 562 92.560500 1 715 2 chr1B.!!$F2 714
5 TraesCS2B01G579800 chr1B 318992443 318993286 843 False 484.5000 518 90.963000 1 715 2 chr1B.!!$F3 714
6 TraesCS2B01G579800 chr7A 170592302 170593118 816 False 542.0000 577 94.240000 1 715 2 chr7A.!!$F3 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 901 0.046397 ACCTGGGCTATTTCTCCCCT 59.954 55.000 0.00 0.0 41.92 4.79 F
967 1103 0.175531 AAACACAAACAGCACAGGGC 59.824 50.000 0.00 0.0 45.30 5.19 F
2490 3190 0.040058 TACTGACCAACCGCCCTCTA 59.960 55.000 0.00 0.0 0.00 2.43 F
2493 3193 0.539986 TGACCAACCGCCCTCTAATC 59.460 55.000 0.00 0.0 0.00 1.75 F
2546 3254 0.830648 TTACCCGAATGGAGCCTCAG 59.169 55.000 0.00 0.0 37.49 3.35 F
4270 5041 1.195448 CTGTGTGTCGGTGATCAAAGC 59.805 52.381 0.00 0.0 0.00 3.51 F
5355 6156 0.043183 TCTGAGAGCCTCCCATTGGA 59.957 55.000 3.62 0.0 38.75 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1919 2570 0.921896 AGCCCCACTATGAAGCATGT 59.078 50.000 0.00 0.0 0.00 3.21 R
2546 3254 1.279271 AGGGCACAGTTGGTCAGTATC 59.721 52.381 0.00 0.0 0.00 2.24 R
3841 4583 0.106967 GGAGAATGCAAGGAGGACCC 60.107 60.000 0.00 0.0 36.73 4.46 R
4399 5173 0.250038 GAGAAGTGCACAGCCACAGA 60.250 55.000 21.04 0.0 38.18 3.41 R
4400 5174 0.533531 TGAGAAGTGCACAGCCACAG 60.534 55.000 21.04 0.0 38.18 3.66 R
6232 7051 0.038801 CTGCGCACACAGAGAGAAGA 60.039 55.000 5.66 0.0 40.25 2.87 R
6822 7683 0.321671 CCAGTTCACCACCGTCATCT 59.678 55.000 0.00 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 4.016706 CAAAGCTCCCCCGACCGT 62.017 66.667 0.00 0.00 0.00 4.83
61 62 3.703127 AAAGCTCCCCCGACCGTC 61.703 66.667 0.00 0.00 0.00 4.79
191 192 5.128663 ACAATTGTAGCAAAAGGTTGGAAGT 59.871 36.000 9.97 0.00 35.10 3.01
250 251 2.143122 CTTCTTGGCTGTAACGAAGCA 58.857 47.619 0.00 0.00 42.69 3.91
301 302 1.142870 CTTGACCCTCACAAACTCCCA 59.857 52.381 0.00 0.00 0.00 4.37
305 306 3.028130 GACCCTCACAAACTCCCAAAAA 58.972 45.455 0.00 0.00 0.00 1.94
384 503 0.976641 ACCGCCTGATCTCTGAACAA 59.023 50.000 0.00 0.00 0.00 2.83
524 654 4.778213 TGTAGCATTAGGGCTGAAAGAT 57.222 40.909 0.00 0.00 45.44 2.40
625 755 2.030027 TCTTCTTCCTCCTCCTGCAA 57.970 50.000 0.00 0.00 0.00 4.08
656 786 4.291815 AGCAGATCCTCCGCTGAT 57.708 55.556 0.00 0.00 33.91 2.90
710 840 1.123077 CCGACATCCTTGGAGATCCA 58.877 55.000 0.00 0.00 45.94 3.41
724 854 2.475155 AGATCCAATCTCCTGTCTGCA 58.525 47.619 0.00 0.00 33.42 4.41
725 855 3.047115 AGATCCAATCTCCTGTCTGCAT 58.953 45.455 0.00 0.00 33.42 3.96
726 856 3.458857 AGATCCAATCTCCTGTCTGCATT 59.541 43.478 0.00 0.00 33.42 3.56
727 857 2.995283 TCCAATCTCCTGTCTGCATTG 58.005 47.619 0.00 0.00 0.00 2.82
728 858 2.022195 CCAATCTCCTGTCTGCATTGG 58.978 52.381 0.00 0.00 38.06 3.16
729 859 2.619849 CCAATCTCCTGTCTGCATTGGT 60.620 50.000 2.43 0.00 39.05 3.67
730 860 3.087031 CAATCTCCTGTCTGCATTGGTT 58.913 45.455 0.00 0.00 0.00 3.67
731 861 2.189594 TCTCCTGTCTGCATTGGTTG 57.810 50.000 0.00 0.00 0.00 3.77
732 862 1.421268 TCTCCTGTCTGCATTGGTTGT 59.579 47.619 0.00 0.00 0.00 3.32
733 863 1.808945 CTCCTGTCTGCATTGGTTGTC 59.191 52.381 0.00 0.00 0.00 3.18
734 864 1.421268 TCCTGTCTGCATTGGTTGTCT 59.579 47.619 0.00 0.00 0.00 3.41
735 865 2.637382 TCCTGTCTGCATTGGTTGTCTA 59.363 45.455 0.00 0.00 0.00 2.59
736 866 3.005554 CCTGTCTGCATTGGTTGTCTAG 58.994 50.000 0.00 0.00 0.00 2.43
737 867 2.417933 CTGTCTGCATTGGTTGTCTAGC 59.582 50.000 0.00 0.00 0.00 3.42
738 868 2.224499 TGTCTGCATTGGTTGTCTAGCA 60.224 45.455 0.00 0.00 0.00 3.49
739 869 3.012518 GTCTGCATTGGTTGTCTAGCAT 58.987 45.455 0.00 0.00 33.55 3.79
740 870 3.441572 GTCTGCATTGGTTGTCTAGCATT 59.558 43.478 0.00 0.00 33.55 3.56
741 871 3.691118 TCTGCATTGGTTGTCTAGCATTC 59.309 43.478 0.00 0.00 33.55 2.67
742 872 3.689347 TGCATTGGTTGTCTAGCATTCT 58.311 40.909 0.00 0.00 33.55 2.40
743 873 3.441222 TGCATTGGTTGTCTAGCATTCTG 59.559 43.478 0.00 0.00 33.55 3.02
744 874 3.181493 GCATTGGTTGTCTAGCATTCTGG 60.181 47.826 0.00 0.00 33.55 3.86
745 875 2.113860 TGGTTGTCTAGCATTCTGGC 57.886 50.000 0.00 0.00 0.00 4.85
746 876 1.350684 TGGTTGTCTAGCATTCTGGCA 59.649 47.619 0.00 0.00 35.83 4.92
747 877 2.025981 TGGTTGTCTAGCATTCTGGCAT 60.026 45.455 0.00 0.00 35.83 4.40
748 878 2.357009 GGTTGTCTAGCATTCTGGCATG 59.643 50.000 0.00 0.00 35.83 4.06
749 879 3.273434 GTTGTCTAGCATTCTGGCATGA 58.727 45.455 0.00 0.00 35.83 3.07
750 880 3.851458 TGTCTAGCATTCTGGCATGAT 57.149 42.857 0.00 0.00 35.83 2.45
751 881 3.473625 TGTCTAGCATTCTGGCATGATG 58.526 45.455 0.00 6.01 35.83 3.07
752 882 3.135167 TGTCTAGCATTCTGGCATGATGA 59.865 43.478 12.70 0.00 35.83 2.92
753 883 3.497640 GTCTAGCATTCTGGCATGATGAC 59.502 47.826 12.70 0.00 35.83 3.06
754 884 1.688772 AGCATTCTGGCATGATGACC 58.311 50.000 12.70 0.00 35.83 4.02
755 885 1.214673 AGCATTCTGGCATGATGACCT 59.785 47.619 12.70 1.16 35.83 3.85
756 886 1.337071 GCATTCTGGCATGATGACCTG 59.663 52.381 12.70 1.34 0.00 4.00
757 887 1.954382 CATTCTGGCATGATGACCTGG 59.046 52.381 0.00 0.00 0.00 4.45
758 888 0.256752 TTCTGGCATGATGACCTGGG 59.743 55.000 0.00 0.00 0.00 4.45
759 889 1.826921 CTGGCATGATGACCTGGGC 60.827 63.158 0.00 0.00 0.00 5.36
760 890 2.280404 CTGGCATGATGACCTGGGCT 62.280 60.000 0.00 0.00 0.00 5.19
761 891 0.987613 TGGCATGATGACCTGGGCTA 60.988 55.000 0.00 0.00 0.00 3.93
762 892 0.403271 GGCATGATGACCTGGGCTAT 59.597 55.000 0.00 0.00 0.00 2.97
763 893 1.202976 GGCATGATGACCTGGGCTATT 60.203 52.381 0.00 0.00 0.00 1.73
764 894 2.590821 GCATGATGACCTGGGCTATTT 58.409 47.619 0.00 0.00 0.00 1.40
765 895 2.555757 GCATGATGACCTGGGCTATTTC 59.444 50.000 0.00 0.00 0.00 2.17
766 896 3.749954 GCATGATGACCTGGGCTATTTCT 60.750 47.826 0.00 0.00 0.00 2.52
767 897 3.845781 TGATGACCTGGGCTATTTCTC 57.154 47.619 0.00 0.00 0.00 2.87
768 898 2.439507 TGATGACCTGGGCTATTTCTCC 59.560 50.000 0.00 0.00 0.00 3.71
769 899 1.213296 TGACCTGGGCTATTTCTCCC 58.787 55.000 0.00 0.00 42.93 4.30
770 900 0.474614 GACCTGGGCTATTTCTCCCC 59.525 60.000 0.00 0.00 41.92 4.81
771 901 0.046397 ACCTGGGCTATTTCTCCCCT 59.954 55.000 0.00 0.00 41.92 4.79
772 902 0.767998 CCTGGGCTATTTCTCCCCTC 59.232 60.000 0.00 0.00 41.92 4.30
773 903 0.767998 CTGGGCTATTTCTCCCCTCC 59.232 60.000 0.00 0.00 41.92 4.30
774 904 0.697854 TGGGCTATTTCTCCCCTCCC 60.698 60.000 0.00 0.00 41.92 4.30
775 905 0.697854 GGGCTATTTCTCCCCTCCCA 60.698 60.000 0.00 0.00 36.50 4.37
776 906 0.474614 GGCTATTTCTCCCCTCCCAC 59.525 60.000 0.00 0.00 0.00 4.61
777 907 1.213296 GCTATTTCTCCCCTCCCACA 58.787 55.000 0.00 0.00 0.00 4.17
783 913 2.041922 TCCCCTCCCACATCTCCG 60.042 66.667 0.00 0.00 0.00 4.63
902 1032 0.543410 TGGCTTCGTTCCCACTCCTA 60.543 55.000 0.00 0.00 0.00 2.94
965 1101 1.204467 ACCAAACACAAACAGCACAGG 59.796 47.619 0.00 0.00 0.00 4.00
966 1102 1.471327 CCAAACACAAACAGCACAGGG 60.471 52.381 0.00 0.00 0.00 4.45
967 1103 0.175531 AAACACAAACAGCACAGGGC 59.824 50.000 0.00 0.00 45.30 5.19
1369 2017 1.134438 GTGGAGGAGGGGTTCAGGTT 61.134 60.000 0.00 0.00 0.00 3.50
1374 2022 1.423794 GGAGGGGTTCAGGTTGGTCA 61.424 60.000 0.00 0.00 0.00 4.02
1380 2028 2.448582 TTCAGGTTGGTCAGCCGGT 61.449 57.895 1.90 0.00 36.74 5.28
1399 2047 0.393808 TGCGGCATTCCTAGGGTTTC 60.394 55.000 9.46 0.00 0.00 2.78
1455 2103 5.280654 TCCTTTTTAGTTGGTACGAGTGT 57.719 39.130 0.00 0.00 0.00 3.55
1470 2119 1.082756 GTGTGCTTACGTGTGCTGC 60.083 57.895 14.05 0.00 0.00 5.25
1631 2280 3.332034 AGTAATGGCGTTTCGTTAGCTT 58.668 40.909 0.00 0.00 0.00 3.74
1652 2301 1.269166 CGACTTCGTGTGGTAGCATC 58.731 55.000 0.00 0.00 34.11 3.91
1655 2304 2.668457 GACTTCGTGTGGTAGCATCTTG 59.332 50.000 0.00 0.00 0.00 3.02
1695 2345 1.613437 CCACCGCCAAGTTTCAGATTT 59.387 47.619 0.00 0.00 0.00 2.17
1697 2347 3.443681 CCACCGCCAAGTTTCAGATTTAT 59.556 43.478 0.00 0.00 0.00 1.40
1703 2353 6.136071 CGCCAAGTTTCAGATTTATTATCGG 58.864 40.000 0.00 0.00 0.00 4.18
1741 2392 6.855836 TCCTCTATTGTTCATGAAAATGTGC 58.144 36.000 10.35 0.00 0.00 4.57
1773 2424 4.454161 TGGTACAAAATTGTCTCGACCATG 59.546 41.667 12.42 0.00 39.73 3.66
1779 2430 4.819105 AATTGTCTCGACCATGACCTTA 57.181 40.909 0.00 0.00 32.67 2.69
1786 2437 2.756207 TCGACCATGACCTTATTCGTGA 59.244 45.455 0.00 0.00 34.86 4.35
1919 2570 4.089361 TGAAGTGCTTAGATCAGACAGGA 58.911 43.478 0.00 0.00 0.00 3.86
1936 2587 1.492176 AGGACATGCTTCATAGTGGGG 59.508 52.381 0.00 0.00 0.00 4.96
2003 2657 3.181429 TGAGGGAGTTGAAGCTTCCATTT 60.181 43.478 23.42 6.77 36.58 2.32
2087 2743 3.153369 TGCCTGCAAATGTCCTAAGAA 57.847 42.857 0.00 0.00 0.00 2.52
2088 2744 2.819608 TGCCTGCAAATGTCCTAAGAAC 59.180 45.455 0.00 0.00 0.00 3.01
2090 2746 3.074412 CCTGCAAATGTCCTAAGAACGT 58.926 45.455 0.00 0.00 0.00 3.99
2096 2752 5.049680 GCAAATGTCCTAAGAACGTCTTCAA 60.050 40.000 3.94 0.00 37.89 2.69
2160 2816 6.721318 TCTTGGAGCTATCCTTATGTTTGTT 58.279 36.000 0.00 0.00 46.80 2.83
2244 2925 8.378565 TCTTGGAGCTATCCTAATATTTGGAAG 58.621 37.037 20.29 17.90 46.80 3.46
2318 3009 2.806608 TCCAGTAGTTTGTGACCGAC 57.193 50.000 0.00 0.00 0.00 4.79
2319 3010 1.342174 TCCAGTAGTTTGTGACCGACC 59.658 52.381 0.00 0.00 0.00 4.79
2323 3014 3.813166 CAGTAGTTTGTGACCGACCATTT 59.187 43.478 0.00 0.00 0.00 2.32
2388 3079 6.611613 TGGGTTCCATTAATTTGCATAACA 57.388 33.333 0.00 0.00 0.00 2.41
2482 3182 1.544246 GGCAACCAATACTGACCAACC 59.456 52.381 0.00 0.00 0.00 3.77
2489 3189 0.617820 ATACTGACCAACCGCCCTCT 60.618 55.000 0.00 0.00 0.00 3.69
2490 3190 0.040058 TACTGACCAACCGCCCTCTA 59.960 55.000 0.00 0.00 0.00 2.43
2491 3191 0.834687 ACTGACCAACCGCCCTCTAA 60.835 55.000 0.00 0.00 0.00 2.10
2492 3192 0.541863 CTGACCAACCGCCCTCTAAT 59.458 55.000 0.00 0.00 0.00 1.73
2493 3193 0.539986 TGACCAACCGCCCTCTAATC 59.460 55.000 0.00 0.00 0.00 1.75
2495 3195 1.209747 GACCAACCGCCCTCTAATCTT 59.790 52.381 0.00 0.00 0.00 2.40
2497 3197 2.041216 ACCAACCGCCCTCTAATCTTTT 59.959 45.455 0.00 0.00 0.00 2.27
2498 3198 2.683362 CCAACCGCCCTCTAATCTTTTC 59.317 50.000 0.00 0.00 0.00 2.29
2499 3199 3.343617 CAACCGCCCTCTAATCTTTTCA 58.656 45.455 0.00 0.00 0.00 2.69
2500 3200 3.933861 ACCGCCCTCTAATCTTTTCAT 57.066 42.857 0.00 0.00 0.00 2.57
2501 3201 5.123227 CAACCGCCCTCTAATCTTTTCATA 58.877 41.667 0.00 0.00 0.00 2.15
2502 3202 4.704965 ACCGCCCTCTAATCTTTTCATAC 58.295 43.478 0.00 0.00 0.00 2.39
2503 3203 4.409247 ACCGCCCTCTAATCTTTTCATACT 59.591 41.667 0.00 0.00 0.00 2.12
2504 3204 5.104485 ACCGCCCTCTAATCTTTTCATACTT 60.104 40.000 0.00 0.00 0.00 2.24
2505 3205 6.099269 ACCGCCCTCTAATCTTTTCATACTTA 59.901 38.462 0.00 0.00 0.00 2.24
2506 3206 7.162082 CCGCCCTCTAATCTTTTCATACTTAT 58.838 38.462 0.00 0.00 0.00 1.73
2507 3207 7.118390 CCGCCCTCTAATCTTTTCATACTTATG 59.882 40.741 0.00 0.00 35.04 1.90
2508 3208 7.657761 CGCCCTCTAATCTTTTCATACTTATGT 59.342 37.037 0.00 0.00 35.26 2.29
2509 3209 9.343539 GCCCTCTAATCTTTTCATACTTATGTT 57.656 33.333 0.00 0.00 35.26 2.71
2517 3217 8.365399 TCTTTTCATACTTATGTTATCTGCCG 57.635 34.615 0.00 0.00 35.26 5.69
2546 3254 0.830648 TTACCCGAATGGAGCCTCAG 59.169 55.000 0.00 0.00 37.49 3.35
2564 3272 2.028112 TCAGATACTGACCAACTGTGCC 60.028 50.000 0.00 0.00 35.39 5.01
2584 3292 4.947388 TGCCCTCGTTTTAATTCTATTGCT 59.053 37.500 0.00 0.00 0.00 3.91
2622 3330 5.118664 CACATGCAAAGATTCTTGAAGCTTG 59.881 40.000 13.52 20.63 33.56 4.01
2674 3382 7.255801 GGGACCTTTACTGATGTCAAAATTTCA 60.256 37.037 0.00 0.00 0.00 2.69
2728 3436 6.500589 ACCTGCTTATGACAGTATTGGTAT 57.499 37.500 0.00 0.00 33.09 2.73
2745 3453 4.528920 TGGTATGGGGTTTTATTTCTCCG 58.471 43.478 0.00 0.00 0.00 4.63
2828 3536 2.745102 TGTGATGCGAGTTTTGTCGTA 58.255 42.857 0.00 0.00 42.17 3.43
2884 3599 6.259167 TGGTTTAAGTATCGAATGTATGTGGC 59.741 38.462 0.00 0.00 0.00 5.01
2933 3648 3.438434 GGTCTTTGACTTCTGATGCCTTC 59.562 47.826 0.00 0.00 32.47 3.46
2963 3684 5.746245 TGCGCTGCAATATTATTTTGTAACC 59.254 36.000 9.73 0.00 34.76 2.85
2993 3714 2.741486 TTCTTTTCAGGACCCGGCCG 62.741 60.000 21.04 21.04 0.00 6.13
3236 3957 2.166829 TGTTTTGACTATGCCGGCAAT 58.833 42.857 36.33 22.47 0.00 3.56
3274 3995 3.758023 CACACTGTTTGGGCTTCATATCA 59.242 43.478 0.00 0.00 0.00 2.15
3329 4050 8.758829 ACTGTTATCATGGAAGAGTACATGTAA 58.241 33.333 7.25 0.00 43.68 2.41
3347 4068 8.848474 ACATGTAATATACAAATGCTACCTCC 57.152 34.615 0.00 0.00 42.76 4.30
3448 4186 4.396166 CCCGCTGAAATGTTTGAGATAGTT 59.604 41.667 0.00 0.00 0.00 2.24
3485 4223 7.227873 TCATTGTTTATGGACACCTGAACTAA 58.772 34.615 0.00 0.00 34.85 2.24
3496 4234 6.391227 ACACCTGAACTAATTTTCAGTTGG 57.609 37.500 16.95 8.08 45.54 3.77
3501 4239 6.463995 TGAACTAATTTTCAGTTGGCACTT 57.536 33.333 0.00 0.00 36.38 3.16
3686 4427 9.739276 TCTCACATGGTAATCTGTCTTATTTTT 57.261 29.630 0.00 0.00 0.00 1.94
3687 4428 9.778993 CTCACATGGTAATCTGTCTTATTTTTG 57.221 33.333 0.00 0.00 0.00 2.44
3841 4583 4.326504 AACTTGATTTTCTGGCAGGTTG 57.673 40.909 15.73 0.00 31.79 3.77
3926 4668 8.704668 TCATCTACCATGTGTTATAATCACACT 58.295 33.333 17.44 9.58 46.26 3.55
4004 4774 9.301153 ACATTTTCATCTGTTGTTTCTTGTAAC 57.699 29.630 0.00 0.00 0.00 2.50
4005 4775 9.520204 CATTTTCATCTGTTGTTTCTTGTAACT 57.480 29.630 0.00 0.00 0.00 2.24
4034 4805 7.894376 ATGCAAGAAAATTGTTAAGACATGG 57.106 32.000 0.00 0.00 35.29 3.66
4162 4933 3.115554 GGTTGCACAACTGCTAACAAAG 58.884 45.455 12.87 0.00 44.57 2.77
4256 5027 2.540515 ACTCGTTGTGTTCTCTGTGTG 58.459 47.619 0.00 0.00 0.00 3.82
4258 5029 2.535984 CTCGTTGTGTTCTCTGTGTGTC 59.464 50.000 0.00 0.00 0.00 3.67
4270 5041 1.195448 CTGTGTGTCGGTGATCAAAGC 59.805 52.381 0.00 0.00 0.00 3.51
4395 5169 4.544152 TCAATTTTCCCCCTAGATGGAACT 59.456 41.667 11.23 2.09 40.27 3.01
4397 5171 6.392842 TCAATTTTCCCCCTAGATGGAACTAT 59.607 38.462 11.23 6.76 40.27 2.12
4398 5172 7.574750 TCAATTTTCCCCCTAGATGGAACTATA 59.425 37.037 11.23 0.00 40.27 1.31
4399 5173 8.394040 CAATTTTCCCCCTAGATGGAACTATAT 58.606 37.037 11.23 3.09 40.27 0.86
4400 5174 7.569599 TTTTCCCCCTAGATGGAACTATATC 57.430 40.000 11.23 0.00 40.27 1.63
4401 5175 6.500490 TTCCCCCTAGATGGAACTATATCT 57.500 41.667 8.40 0.00 35.75 1.98
4402 5176 5.843469 TCCCCCTAGATGGAACTATATCTG 58.157 45.833 0.00 0.00 38.35 2.90
4405 5179 5.423610 CCCCTAGATGGAACTATATCTGTGG 59.576 48.000 0.00 0.00 38.35 4.17
4616 5390 1.140252 GGAGGTATTTTCGCAGCCCTA 59.860 52.381 0.00 0.00 0.00 3.53
4621 5395 3.498777 GGTATTTTCGCAGCCCTATCTTC 59.501 47.826 0.00 0.00 0.00 2.87
4628 5402 1.337635 GCAGCCCTATCTTCCATCTCG 60.338 57.143 0.00 0.00 0.00 4.04
4716 5490 5.629849 GGATATACTGTTATGACACGAGCAC 59.370 44.000 0.00 0.00 0.00 4.40
4875 5649 9.626045 GCAAGGTATTATTTATGTGGATTTAGC 57.374 33.333 0.00 0.00 0.00 3.09
4915 5689 9.109393 GCAGTGTTGACTATATTATCCAGAAAA 57.891 33.333 0.00 0.00 0.00 2.29
4947 5721 1.291132 GTAACATCCTGCTTCCGCTC 58.709 55.000 0.00 0.00 36.97 5.03
4976 5750 7.405292 TCACTCTTTACATTTTCTGGATCCAT 58.595 34.615 16.63 0.18 0.00 3.41
4977 5751 7.337689 TCACTCTTTACATTTTCTGGATCCATG 59.662 37.037 16.63 12.88 0.00 3.66
5001 5775 1.553706 TGGTTTCTACTCCCTCCGTC 58.446 55.000 0.00 0.00 0.00 4.79
5007 5781 1.854939 TCTACTCCCTCCGTCCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
5009 5783 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
5010 5784 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
5011 5785 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
5012 5786 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
5014 5788 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
5015 5789 3.583086 CCCTCCGTCCCATAATGTAAGAT 59.417 47.826 0.00 0.00 0.00 2.40
5017 5791 4.040461 CCTCCGTCCCATAATGTAAGATGT 59.960 45.833 0.00 0.00 0.00 3.06
5019 5793 5.996644 TCCGTCCCATAATGTAAGATGTTT 58.003 37.500 0.00 0.00 0.00 2.83
5020 5794 6.419791 TCCGTCCCATAATGTAAGATGTTTT 58.580 36.000 0.00 0.00 0.00 2.43
5021 5795 6.887545 TCCGTCCCATAATGTAAGATGTTTTT 59.112 34.615 0.00 0.00 0.00 1.94
5067 5863 9.635404 AAAAACATCTTATATTATGGGACGGAA 57.365 29.630 0.00 0.00 0.00 4.30
5107 5903 8.936864 AGTGTTAACTTTCGGATGAAATAGAAG 58.063 33.333 7.22 0.00 42.90 2.85
5108 5904 8.175716 GTGTTAACTTTCGGATGAAATAGAAGG 58.824 37.037 7.22 0.00 42.90 3.46
5109 5905 7.335924 TGTTAACTTTCGGATGAAATAGAAGGG 59.664 37.037 7.22 0.00 42.90 3.95
5114 5911 7.450323 ACTTTCGGATGAAATAGAAGGGAAAAA 59.550 33.333 0.00 0.00 42.90 1.94
5226 6026 7.593273 TGTCCAATTCTTAAAAATTAGCACACG 59.407 33.333 0.00 0.00 0.00 4.49
5234 6034 2.489938 AATTAGCACACGGGACATGT 57.510 45.000 0.00 0.00 31.53 3.21
5264 6064 1.344438 TCTAGCTCTTGGTGTGGTGTG 59.656 52.381 0.00 0.00 0.00 3.82
5269 6069 2.479560 GCTCTTGGTGTGGTGTGTTTTC 60.480 50.000 0.00 0.00 0.00 2.29
5270 6070 2.752354 CTCTTGGTGTGGTGTGTTTTCA 59.248 45.455 0.00 0.00 0.00 2.69
5310 6111 2.029649 CACCAAATGAGCTGGTCTTTGG 60.030 50.000 28.77 28.77 44.05 3.28
5338 6139 3.118112 CACCTTTGTATCATCCAGCCTCT 60.118 47.826 0.00 0.00 0.00 3.69
5339 6140 3.118112 ACCTTTGTATCATCCAGCCTCTG 60.118 47.826 0.00 0.00 0.00 3.35
5341 6142 4.378774 CTTTGTATCATCCAGCCTCTGAG 58.621 47.826 0.00 0.00 32.44 3.35
5342 6143 3.319031 TGTATCATCCAGCCTCTGAGA 57.681 47.619 6.17 0.00 32.44 3.27
5344 6145 1.050204 ATCATCCAGCCTCTGAGAGC 58.950 55.000 6.17 8.06 32.44 4.09
5345 6146 1.047596 TCATCCAGCCTCTGAGAGCC 61.048 60.000 6.17 0.00 32.44 4.70
5346 6147 1.049855 CATCCAGCCTCTGAGAGCCT 61.050 60.000 6.17 0.00 32.44 4.58
5347 6148 0.760189 ATCCAGCCTCTGAGAGCCTC 60.760 60.000 6.17 0.00 32.44 4.70
5348 6149 2.433994 CCAGCCTCTGAGAGCCTCC 61.434 68.421 6.17 0.00 32.44 4.30
5349 6150 2.042025 AGCCTCTGAGAGCCTCCC 60.042 66.667 6.17 0.00 0.00 4.30
5350 6151 2.364842 GCCTCTGAGAGCCTCCCA 60.365 66.667 6.17 0.00 0.00 4.37
5351 6152 1.765657 GCCTCTGAGAGCCTCCCAT 60.766 63.158 6.17 0.00 0.00 4.00
5352 6153 1.344191 GCCTCTGAGAGCCTCCCATT 61.344 60.000 6.17 0.00 0.00 3.16
5355 6156 0.043183 TCTGAGAGCCTCCCATTGGA 59.957 55.000 3.62 0.00 38.75 3.53
5495 6296 4.479158 ACAATGATACCCCTGTTGTTTGT 58.521 39.130 0.00 0.00 29.38 2.83
5589 6395 3.438087 CAGCACTGACCCAGATTAGTTTG 59.562 47.826 0.45 0.00 35.18 2.93
5645 6451 2.951642 CCAACACATAGGGCCATAACAG 59.048 50.000 6.18 0.00 0.00 3.16
5657 6463 4.162131 GGGCCATAACAGAAACAAATGGAT 59.838 41.667 4.39 0.00 39.60 3.41
5736 6542 8.830580 CAAATTCCTGTAATCATATTGAGTCGT 58.169 33.333 0.00 0.00 0.00 4.34
5803 6611 0.615850 AGCTAGTGTGCCTCTTTCCC 59.384 55.000 0.00 0.00 0.00 3.97
5843 6659 1.534163 CATCTGGATGCCTGCAATACG 59.466 52.381 0.00 0.00 31.39 3.06
5879 6695 0.600782 TTTGCGGTTACCTCACGACC 60.601 55.000 0.00 0.00 0.00 4.79
5882 6698 0.735287 GCGGTTACCTCACGACCTTC 60.735 60.000 0.00 0.00 0.00 3.46
5977 6796 3.480133 AAAGGAGCCGGGGGATCG 61.480 66.667 2.18 0.00 39.27 3.69
5996 6815 1.505477 GGATGCCGCTGATGAGAAGC 61.505 60.000 0.00 0.00 37.31 3.86
6001 6820 1.576356 CCGCTGATGAGAAGCCTAAC 58.424 55.000 0.00 0.00 37.37 2.34
6022 6841 2.182030 GTGGAAGAGACGGAGCCG 59.818 66.667 7.48 7.48 46.03 5.52
6025 6844 2.047443 GGAAGAGACGGAGCCGAGT 61.047 63.158 16.83 1.48 42.83 4.18
6055 6874 3.656264 TGAAGATCGAGTATCCCCCTCTA 59.344 47.826 0.00 0.00 34.90 2.43
6100 6919 2.125350 CTTCTCTGCAGGGTCGCC 60.125 66.667 14.66 0.00 0.00 5.54
6151 6970 3.425162 AGGAATTTCCTCCACACAGAC 57.575 47.619 12.37 0.00 45.66 3.51
6154 6973 1.444933 ATTTCCTCCACACAGACCCA 58.555 50.000 0.00 0.00 0.00 4.51
6179 6998 2.775890 AGGTCACACAGCTGAAATCAG 58.224 47.619 23.35 6.05 46.40 2.90
6188 7007 3.817647 ACAGCTGAAATCAGTTTCCTCAC 59.182 43.478 23.35 0.00 45.45 3.51
6189 7008 3.190118 CAGCTGAAATCAGTTTCCTCACC 59.810 47.826 8.42 0.00 45.45 4.02
6191 7010 3.823304 GCTGAAATCAGTTTCCTCACCTT 59.177 43.478 11.77 0.00 45.45 3.50
6192 7011 4.083057 GCTGAAATCAGTTTCCTCACCTTC 60.083 45.833 11.77 0.00 45.45 3.46
6193 7012 5.047566 TGAAATCAGTTTCCTCACCTTCA 57.952 39.130 0.00 0.00 42.44 3.02
6194 7013 5.065914 TGAAATCAGTTTCCTCACCTTCAG 58.934 41.667 0.00 0.00 42.44 3.02
6195 7014 4.713792 AATCAGTTTCCTCACCTTCAGT 57.286 40.909 0.00 0.00 0.00 3.41
6196 7015 5.825593 AATCAGTTTCCTCACCTTCAGTA 57.174 39.130 0.00 0.00 0.00 2.74
6197 7016 6.380079 AATCAGTTTCCTCACCTTCAGTAT 57.620 37.500 0.00 0.00 0.00 2.12
6198 7017 5.407407 TCAGTTTCCTCACCTTCAGTATC 57.593 43.478 0.00 0.00 0.00 2.24
6199 7018 4.082190 TCAGTTTCCTCACCTTCAGTATCG 60.082 45.833 0.00 0.00 0.00 2.92
6202 7021 4.720649 TTCCTCACCTTCAGTATCGAAG 57.279 45.455 0.00 0.00 41.77 3.79
6203 7022 3.698289 TCCTCACCTTCAGTATCGAAGT 58.302 45.455 0.00 0.00 40.72 3.01
6205 7024 4.527038 TCCTCACCTTCAGTATCGAAGTTT 59.473 41.667 0.00 0.00 40.72 2.66
6206 7025 4.627467 CCTCACCTTCAGTATCGAAGTTTG 59.373 45.833 0.00 0.00 40.72 2.93
6207 7026 5.209818 TCACCTTCAGTATCGAAGTTTGT 57.790 39.130 0.00 0.00 40.72 2.83
6208 7027 5.227908 TCACCTTCAGTATCGAAGTTTGTC 58.772 41.667 0.00 0.00 40.72 3.18
6210 7029 5.346281 CACCTTCAGTATCGAAGTTTGTCTC 59.654 44.000 0.00 0.00 40.72 3.36
6213 7032 6.349777 CCTTCAGTATCGAAGTTTGTCTCTCT 60.350 42.308 0.00 0.00 40.72 3.10
6214 7033 5.944013 TCAGTATCGAAGTTTGTCTCTCTG 58.056 41.667 0.00 0.00 0.00 3.35
6215 7034 5.705905 TCAGTATCGAAGTTTGTCTCTCTGA 59.294 40.000 0.00 0.00 0.00 3.27
6216 7035 6.375736 TCAGTATCGAAGTTTGTCTCTCTGAT 59.624 38.462 0.00 0.00 0.00 2.90
6217 7036 6.471841 CAGTATCGAAGTTTGTCTCTCTGATG 59.528 42.308 0.00 0.00 0.00 3.07
6218 7037 4.179926 TCGAAGTTTGTCTCTCTGATGG 57.820 45.455 0.00 0.00 0.00 3.51
6219 7038 3.574396 TCGAAGTTTGTCTCTCTGATGGT 59.426 43.478 0.00 0.00 0.00 3.55
6220 7039 4.765339 TCGAAGTTTGTCTCTCTGATGGTA 59.235 41.667 0.00 0.00 0.00 3.25
6221 7040 5.243060 TCGAAGTTTGTCTCTCTGATGGTAA 59.757 40.000 0.00 0.00 0.00 2.85
6223 7042 5.153950 AGTTTGTCTCTCTGATGGTAACC 57.846 43.478 0.00 0.00 0.00 2.85
6224 7043 4.841246 AGTTTGTCTCTCTGATGGTAACCT 59.159 41.667 0.00 0.00 0.00 3.50
6225 7044 4.808414 TTGTCTCTCTGATGGTAACCTG 57.192 45.455 0.00 0.00 0.00 4.00
6226 7045 4.047627 TGTCTCTCTGATGGTAACCTGA 57.952 45.455 0.00 0.00 0.00 3.86
6227 7046 4.614475 TGTCTCTCTGATGGTAACCTGAT 58.386 43.478 0.00 0.00 0.00 2.90
6228 7047 4.403752 TGTCTCTCTGATGGTAACCTGATG 59.596 45.833 0.00 0.00 0.00 3.07
6229 7048 3.386078 TCTCTCTGATGGTAACCTGATGC 59.614 47.826 0.00 0.00 0.00 3.91
6230 7049 3.378512 TCTCTGATGGTAACCTGATGCT 58.621 45.455 0.00 0.00 0.00 3.79
6231 7050 3.776969 TCTCTGATGGTAACCTGATGCTT 59.223 43.478 0.00 0.00 0.00 3.91
6232 7051 4.225942 TCTCTGATGGTAACCTGATGCTTT 59.774 41.667 0.00 0.00 0.00 3.51
6233 7052 4.517285 TCTGATGGTAACCTGATGCTTTC 58.483 43.478 0.00 0.00 0.00 2.62
6234 7053 4.225942 TCTGATGGTAACCTGATGCTTTCT 59.774 41.667 0.00 0.00 0.00 2.52
6235 7054 4.922206 TGATGGTAACCTGATGCTTTCTT 58.078 39.130 0.00 0.00 0.00 2.52
6239 7064 4.287067 TGGTAACCTGATGCTTTCTTCTCT 59.713 41.667 0.00 0.00 0.00 3.10
6247 7078 2.487934 TGCTTTCTTCTCTCTGTGTGC 58.512 47.619 0.00 0.00 0.00 4.57
6290 7121 1.904032 CTCTCAGGTGGAGGAAGGC 59.096 63.158 0.00 0.00 44.19 4.35
6354 7185 1.129251 CCATCAACAAGCTGCAGTACG 59.871 52.381 16.64 6.22 0.00 3.67
6355 7186 1.129251 CATCAACAAGCTGCAGTACGG 59.871 52.381 16.64 5.46 0.00 4.02
6435 7266 3.279434 GACTAGGCCCATGTTAACAAGG 58.721 50.000 20.58 20.58 34.68 3.61
6524 7355 9.880064 GAGGATTTTAATTTAACTTATCGCCTC 57.120 33.333 0.00 0.00 0.00 4.70
6565 7400 1.203994 TCGTAGACTTGGTAGGCTTGC 59.796 52.381 0.00 0.00 35.73 4.01
6591 7426 6.753744 AGCTCAAGTGTGAAAAATGTTTCTTC 59.246 34.615 9.75 4.06 43.13 2.87
6592 7427 6.291269 GCTCAAGTGTGAAAAATGTTTCTTCG 60.291 38.462 9.75 0.00 43.13 3.79
6593 7428 6.616947 TCAAGTGTGAAAAATGTTTCTTCGT 58.383 32.000 9.75 0.00 43.13 3.85
6594 7429 6.745450 TCAAGTGTGAAAAATGTTTCTTCGTC 59.255 34.615 9.75 2.11 43.13 4.20
6595 7430 5.263185 AGTGTGAAAAATGTTTCTTCGTCG 58.737 37.500 9.75 0.00 43.13 5.12
6693 7528 7.099120 TGATGCACATATTATTCATAGCGACT 58.901 34.615 0.00 0.00 0.00 4.18
6694 7529 6.951256 TGCACATATTATTCATAGCGACTC 57.049 37.500 0.00 0.00 0.00 3.36
6705 7540 1.293924 TAGCGACTCGTGCTAGTACC 58.706 55.000 5.30 0.00 43.71 3.34
6727 7562 3.432252 CGAGTGCTAGTGGTTTTTACTGG 59.568 47.826 0.00 0.00 0.00 4.00
6738 7573 3.942115 GGTTTTTACTGGCTGATCCTCTC 59.058 47.826 0.00 0.00 35.26 3.20
6745 7580 1.273495 TGGCTGATCCTCTCTCCTTGT 60.273 52.381 0.00 0.00 35.26 3.16
6746 7581 1.836802 GGCTGATCCTCTCTCCTTGTT 59.163 52.381 0.00 0.00 0.00 2.83
6748 7583 3.645687 GGCTGATCCTCTCTCCTTGTTAT 59.354 47.826 0.00 0.00 0.00 1.89
6750 7585 5.279256 GGCTGATCCTCTCTCCTTGTTATAC 60.279 48.000 0.00 0.00 0.00 1.47
6758 7593 6.814146 CCTCTCTCCTTGTTATACTGTCAAAC 59.186 42.308 0.00 0.00 0.00 2.93
6762 7597 8.547967 TCTCCTTGTTATACTGTCAAACAATC 57.452 34.615 16.27 0.00 41.01 2.67
6763 7598 8.375506 TCTCCTTGTTATACTGTCAAACAATCT 58.624 33.333 16.27 0.00 41.01 2.40
6766 7601 7.094634 CCTTGTTATACTGTCAAACAATCTGCT 60.095 37.037 16.27 0.00 41.01 4.24
6810 7671 0.865769 CCGGACGTGACTGGAAAAAG 59.134 55.000 0.00 0.00 38.49 2.27
6833 7694 1.354337 CTTCGTGCAGATGACGGTGG 61.354 60.000 0.00 0.00 37.43 4.61
6837 7698 0.602638 GTGCAGATGACGGTGGTGAA 60.603 55.000 0.00 0.00 0.00 3.18
6838 7699 0.602638 TGCAGATGACGGTGGTGAAC 60.603 55.000 0.00 0.00 0.00 3.18
6839 7700 0.320771 GCAGATGACGGTGGTGAACT 60.321 55.000 0.00 0.00 0.00 3.01
6860 7721 1.336332 GGTGATGGGATCGATCAGACG 60.336 57.143 25.93 0.00 30.39 4.18
6966 7835 2.502080 GACCGTGTCGCTCACTCG 60.502 66.667 8.43 4.33 44.16 4.18
6980 7849 3.129502 CTCGCATGTGGTGGCCTG 61.130 66.667 3.32 0.00 0.00 4.85
6981 7850 4.720902 TCGCATGTGGTGGCCTGG 62.721 66.667 3.32 0.00 0.00 4.45
6984 7853 3.066190 CATGTGGTGGCCTGGCTG 61.066 66.667 19.68 2.78 0.00 4.85
7002 9223 0.391661 TGAGCTGATTGGAGAACGGC 60.392 55.000 0.00 0.00 36.33 5.68
7023 9244 1.301874 TGTTTTGACCGGGTAGCGG 60.302 57.895 6.32 0.00 0.00 5.52
7024 9245 2.358984 TTTTGACCGGGTAGCGGC 60.359 61.111 6.32 0.00 0.00 6.53
7025 9246 3.179888 TTTTGACCGGGTAGCGGCA 62.180 57.895 6.32 0.00 0.00 5.69
7026 9247 3.599285 TTTGACCGGGTAGCGGCAG 62.599 63.158 6.32 0.00 0.00 4.85
7045 9272 2.669569 GCTTTGACCGGCAGCAGA 60.670 61.111 0.00 0.00 33.45 4.26
7047 9274 2.669569 TTTGACCGGCAGCAGAGC 60.670 61.111 0.00 0.00 0.00 4.09
7074 9301 1.270465 GGGGCTTATGATTTGCATGCC 60.270 52.381 16.68 0.00 42.46 4.40
7075 9302 2.159327 GGCTTATGATTTGCATGCCC 57.841 50.000 16.68 0.36 39.15 5.36
7076 9303 1.690352 GGCTTATGATTTGCATGCCCT 59.310 47.619 16.68 0.00 39.15 5.19
7077 9304 2.547218 GGCTTATGATTTGCATGCCCTG 60.547 50.000 16.68 0.00 39.15 4.45
7101 9328 4.853050 GCTCCTGATGCGCTGGCT 62.853 66.667 9.73 0.00 40.82 4.75
7160 9387 2.666190 GCCACTCACTCGCTTGCA 60.666 61.111 0.00 0.00 0.00 4.08
7163 9390 1.571460 CACTCACTCGCTTGCAACC 59.429 57.895 0.00 0.00 0.00 3.77
7208 9451 1.534595 CGAATTATTGCAGCTGTGGCC 60.535 52.381 16.64 0.00 39.73 5.36
7229 9472 0.107214 CTGTCCCTCTCTCTCGAGCT 60.107 60.000 7.81 0.00 37.19 4.09
7230 9473 0.107410 TGTCCCTCTCTCTCGAGCTC 60.107 60.000 7.81 2.73 37.19 4.09
7234 9477 1.447317 CCTCTCTCTCGAGCTCAGCC 61.447 65.000 15.40 0.00 37.19 4.85
7235 9478 1.775039 CTCTCTCTCGAGCTCAGCCG 61.775 65.000 15.40 0.00 37.19 5.52
7236 9479 1.817520 CTCTCTCGAGCTCAGCCGA 60.818 63.158 15.40 9.48 32.49 5.54
7237 9480 1.775039 CTCTCTCGAGCTCAGCCGAG 61.775 65.000 23.85 23.85 44.37 4.63
7238 9481 1.817520 CTCTCGAGCTCAGCCGAGA 60.818 63.158 27.79 27.79 46.85 4.04
7239 9482 1.817520 TCTCGAGCTCAGCCGAGAG 60.818 63.158 26.71 17.88 45.51 3.20
7240 9483 1.817520 CTCGAGCTCAGCCGAGAGA 60.818 63.158 24.96 4.70 45.13 3.10
7241 9484 1.775039 CTCGAGCTCAGCCGAGAGAG 61.775 65.000 24.96 10.00 45.13 3.20
7242 9485 1.817520 CGAGCTCAGCCGAGAGAGA 60.818 63.158 15.40 0.00 42.34 3.10
7243 9486 1.775039 CGAGCTCAGCCGAGAGAGAG 61.775 65.000 15.40 0.00 42.34 3.20
7279 9556 4.514585 TGGGCCGGCCGCATTTAT 62.515 61.111 38.22 0.00 40.31 1.40
7280 9557 2.281900 GGGCCGGCCGCATTTATA 60.282 61.111 38.22 0.00 40.31 0.98
7281 9558 2.622962 GGGCCGGCCGCATTTATAC 61.623 63.158 38.22 18.05 40.31 1.47
7282 9559 1.894756 GGCCGGCCGCATTTATACA 60.895 57.895 33.60 0.00 40.31 2.29
7283 9560 1.241315 GGCCGGCCGCATTTATACAT 61.241 55.000 33.60 0.00 40.31 2.29
7284 9561 0.109781 GCCGGCCGCATTTATACATG 60.110 55.000 22.85 1.82 37.47 3.21
7285 9562 0.109781 CCGGCCGCATTTATACATGC 60.110 55.000 22.85 12.90 45.34 4.06
7286 9563 0.874390 CGGCCGCATTTATACATGCT 59.126 50.000 14.67 0.00 46.43 3.79
7287 9564 1.135972 CGGCCGCATTTATACATGCTC 60.136 52.381 14.67 11.60 46.43 4.26
7288 9565 1.135972 GGCCGCATTTATACATGCTCG 60.136 52.381 18.98 11.31 46.43 5.03
7289 9566 1.135972 GCCGCATTTATACATGCTCGG 60.136 52.381 18.98 14.98 46.43 4.63
7290 9567 1.464608 CCGCATTTATACATGCTCGGG 59.535 52.381 18.98 10.86 46.43 5.14
7291 9568 1.464608 CGCATTTATACATGCTCGGGG 59.535 52.381 18.98 2.60 46.43 5.73
7292 9569 1.812571 GCATTTATACATGCTCGGGGG 59.187 52.381 15.17 0.00 45.35 5.40
7293 9570 1.812571 CATTTATACATGCTCGGGGGC 59.187 52.381 0.00 0.00 0.00 5.80
7294 9571 0.250124 TTTATACATGCTCGGGGGCG 60.250 55.000 0.00 0.00 34.52 6.13
7295 9572 2.107041 TTATACATGCTCGGGGGCGG 62.107 60.000 0.00 0.00 34.52 6.13
7310 9587 4.266070 CGGCATCGATCGACCGGT 62.266 66.667 29.58 6.92 41.95 5.28
7311 9588 2.354773 GGCATCGATCGACCGGTC 60.355 66.667 25.28 25.28 0.00 4.79
7312 9589 2.354773 GCATCGATCGACCGGTCC 60.355 66.667 28.52 13.88 0.00 4.46
7313 9590 3.116463 CATCGATCGACCGGTCCA 58.884 61.111 28.52 17.72 0.00 4.02
7314 9591 1.660355 CATCGATCGACCGGTCCAT 59.340 57.895 28.52 22.16 0.00 3.41
7315 9592 0.387367 CATCGATCGACCGGTCCATC 60.387 60.000 26.87 26.87 0.00 3.51
7316 9593 0.537600 ATCGATCGACCGGTCCATCT 60.538 55.000 31.14 16.77 0.00 2.90
7317 9594 1.164662 TCGATCGACCGGTCCATCTC 61.165 60.000 31.14 20.17 0.00 2.75
7318 9595 1.660917 GATCGACCGGTCCATCTCC 59.339 63.158 28.65 8.95 0.00 3.71
7319 9596 2.131294 GATCGACCGGTCCATCTCCG 62.131 65.000 28.65 17.34 46.49 4.63
7325 9602 4.175988 GGTCCATCTCCGATCCGA 57.824 61.111 0.00 0.00 0.00 4.55
7326 9603 1.660917 GGTCCATCTCCGATCCGAC 59.339 63.158 0.00 0.00 0.00 4.79
7327 9604 1.660917 GTCCATCTCCGATCCGACC 59.339 63.158 0.00 0.00 0.00 4.79
7328 9605 1.897137 TCCATCTCCGATCCGACCG 60.897 63.158 0.00 0.00 0.00 4.79
7329 9606 1.897137 CCATCTCCGATCCGACCGA 60.897 63.158 0.00 0.00 0.00 4.69
7330 9607 1.283181 CATCTCCGATCCGACCGAC 59.717 63.158 0.00 0.00 0.00 4.79
7331 9608 2.252346 ATCTCCGATCCGACCGACG 61.252 63.158 0.00 0.00 42.18 5.12
7332 9609 4.609247 CTCCGATCCGACCGACGC 62.609 72.222 0.00 0.00 41.07 5.19
7343 9620 3.884350 CCGACGCGCCACTAGCTA 61.884 66.667 5.73 0.00 40.39 3.32
7344 9621 2.352457 CGACGCGCCACTAGCTAG 60.352 66.667 19.44 19.44 40.39 3.42
7345 9622 2.799371 GACGCGCCACTAGCTAGT 59.201 61.111 20.95 20.95 40.39 2.57
7346 9623 1.139095 GACGCGCCACTAGCTAGTT 59.861 57.895 23.94 8.48 40.39 2.24
7347 9624 0.866483 GACGCGCCACTAGCTAGTTC 60.866 60.000 23.94 16.55 40.39 3.01
7348 9625 1.939785 CGCGCCACTAGCTAGTTCG 60.940 63.158 27.90 27.90 40.39 3.95
7349 9626 2.231618 GCGCCACTAGCTAGTTCGC 61.232 63.158 34.69 34.69 43.37 4.70
7350 9627 1.433879 CGCCACTAGCTAGTTCGCT 59.566 57.895 27.84 7.81 43.83 4.93
7351 9628 0.661552 CGCCACTAGCTAGTTCGCTA 59.338 55.000 27.84 0.00 41.30 4.26
7359 9636 3.264666 CTAGTTCGCTAGCTGCCTG 57.735 57.895 13.93 0.00 40.51 4.85
7360 9637 0.873743 CTAGTTCGCTAGCTGCCTGC 60.874 60.000 13.93 0.00 40.51 4.85
7374 9651 2.893895 CTGCGACGCCATGCTCAT 60.894 61.111 18.69 0.00 0.00 2.90
7375 9652 2.879070 CTGCGACGCCATGCTCATC 61.879 63.158 18.69 0.00 0.00 2.92
7376 9653 3.643978 GCGACGCCATGCTCATCC 61.644 66.667 9.14 0.00 0.00 3.51
7377 9654 3.333189 CGACGCCATGCTCATCCG 61.333 66.667 0.00 0.00 0.00 4.18
7378 9655 2.202932 GACGCCATGCTCATCCGT 60.203 61.111 5.22 5.22 34.52 4.69
7379 9656 2.202932 ACGCCATGCTCATCCGTC 60.203 61.111 0.00 0.00 0.00 4.79
7380 9657 2.969238 CGCCATGCTCATCCGTCC 60.969 66.667 0.00 0.00 0.00 4.79
7381 9658 2.969238 GCCATGCTCATCCGTCCG 60.969 66.667 0.00 0.00 0.00 4.79
7382 9659 2.501128 CCATGCTCATCCGTCCGT 59.499 61.111 0.00 0.00 0.00 4.69
7383 9660 1.739667 CCATGCTCATCCGTCCGTA 59.260 57.895 0.00 0.00 0.00 4.02
7384 9661 0.104120 CCATGCTCATCCGTCCGTAA 59.896 55.000 0.00 0.00 0.00 3.18
7385 9662 1.209128 CATGCTCATCCGTCCGTAAC 58.791 55.000 0.00 0.00 0.00 2.50
7386 9663 1.112113 ATGCTCATCCGTCCGTAACT 58.888 50.000 0.00 0.00 0.00 2.24
7387 9664 0.892755 TGCTCATCCGTCCGTAACTT 59.107 50.000 0.00 0.00 0.00 2.66
7388 9665 1.278238 GCTCATCCGTCCGTAACTTG 58.722 55.000 0.00 0.00 0.00 3.16
7389 9666 1.278238 CTCATCCGTCCGTAACTTGC 58.722 55.000 0.00 0.00 0.00 4.01
7390 9667 0.108520 TCATCCGTCCGTAACTTGCC 60.109 55.000 0.00 0.00 0.00 4.52
7391 9668 0.108329 CATCCGTCCGTAACTTGCCT 60.108 55.000 0.00 0.00 0.00 4.75
7392 9669 1.135527 CATCCGTCCGTAACTTGCCTA 59.864 52.381 0.00 0.00 0.00 3.93
7393 9670 1.255882 TCCGTCCGTAACTTGCCTAA 58.744 50.000 0.00 0.00 0.00 2.69
7394 9671 1.067635 TCCGTCCGTAACTTGCCTAAC 60.068 52.381 0.00 0.00 0.00 2.34
7395 9672 0.986992 CGTCCGTAACTTGCCTAACG 59.013 55.000 0.00 0.00 35.20 3.18
7396 9673 1.401409 CGTCCGTAACTTGCCTAACGA 60.401 52.381 0.00 0.00 37.53 3.85
7397 9674 2.733227 CGTCCGTAACTTGCCTAACGAT 60.733 50.000 0.00 0.00 37.53 3.73
7398 9675 2.856557 GTCCGTAACTTGCCTAACGATC 59.143 50.000 0.00 0.00 37.53 3.69
7399 9676 2.756760 TCCGTAACTTGCCTAACGATCT 59.243 45.455 0.00 0.00 37.53 2.75
7400 9677 3.114065 CCGTAACTTGCCTAACGATCTC 58.886 50.000 0.00 0.00 37.53 2.75
7401 9678 3.181489 CCGTAACTTGCCTAACGATCTCT 60.181 47.826 0.00 0.00 37.53 3.10
7402 9679 4.421948 CGTAACTTGCCTAACGATCTCTT 58.578 43.478 0.00 0.00 37.53 2.85
7403 9680 4.499758 CGTAACTTGCCTAACGATCTCTTC 59.500 45.833 0.00 0.00 37.53 2.87
7404 9681 3.528597 ACTTGCCTAACGATCTCTTCC 57.471 47.619 0.00 0.00 0.00 3.46
7405 9682 3.100671 ACTTGCCTAACGATCTCTTCCT 58.899 45.455 0.00 0.00 0.00 3.36
7406 9683 3.131400 ACTTGCCTAACGATCTCTTCCTC 59.869 47.826 0.00 0.00 0.00 3.71
7407 9684 2.735151 TGCCTAACGATCTCTTCCTCA 58.265 47.619 0.00 0.00 0.00 3.86
7408 9685 3.300388 TGCCTAACGATCTCTTCCTCAT 58.700 45.455 0.00 0.00 0.00 2.90
7409 9686 3.706594 TGCCTAACGATCTCTTCCTCATT 59.293 43.478 0.00 0.00 0.00 2.57
7410 9687 4.202161 TGCCTAACGATCTCTTCCTCATTC 60.202 45.833 0.00 0.00 0.00 2.67
7411 9688 4.038642 GCCTAACGATCTCTTCCTCATTCT 59.961 45.833 0.00 0.00 0.00 2.40
7412 9689 5.768317 CCTAACGATCTCTTCCTCATTCTC 58.232 45.833 0.00 0.00 0.00 2.87
7413 9690 5.300539 CCTAACGATCTCTTCCTCATTCTCA 59.699 44.000 0.00 0.00 0.00 3.27
7414 9691 5.867903 AACGATCTCTTCCTCATTCTCAT 57.132 39.130 0.00 0.00 0.00 2.90
7415 9692 5.452078 ACGATCTCTTCCTCATTCTCATC 57.548 43.478 0.00 0.00 0.00 2.92
7416 9693 4.280677 ACGATCTCTTCCTCATTCTCATCC 59.719 45.833 0.00 0.00 0.00 3.51
7417 9694 4.523943 CGATCTCTTCCTCATTCTCATCCT 59.476 45.833 0.00 0.00 0.00 3.24
7418 9695 5.565242 CGATCTCTTCCTCATTCTCATCCTG 60.565 48.000 0.00 0.00 0.00 3.86
7419 9696 4.876580 TCTCTTCCTCATTCTCATCCTGA 58.123 43.478 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 1.332375 CAACTTTCGTTTCAAGCCGGA 59.668 47.619 5.05 0.00 0.00 5.14
61 62 1.064952 ACAACTTTCGTTTCAAGCCGG 59.935 47.619 0.00 0.00 0.00 6.13
250 251 8.591072 AGATTGACATCAACTCCAAAATCAAAT 58.409 29.630 0.00 0.00 38.86 2.32
305 306 4.122046 GGCATCAAACTTCTTGCTGTTTT 58.878 39.130 0.00 0.00 34.60 2.43
310 311 2.163010 CGATGGCATCAAACTTCTTGCT 59.837 45.455 25.88 0.00 35.46 3.91
311 312 2.523015 CGATGGCATCAAACTTCTTGC 58.477 47.619 25.88 0.00 0.00 4.01
312 313 2.159338 CCCGATGGCATCAAACTTCTTG 60.159 50.000 25.88 7.20 0.00 3.02
313 314 2.094675 CCCGATGGCATCAAACTTCTT 58.905 47.619 25.88 0.00 0.00 2.52
316 317 0.039618 ACCCCGATGGCATCAAACTT 59.960 50.000 25.88 4.23 37.83 2.66
447 567 4.152647 ACTGGAGGAAAATCAAGGGAAAC 58.847 43.478 0.00 0.00 0.00 2.78
524 654 0.460722 TTCGAGTCCACACACCGAAA 59.539 50.000 0.00 0.00 37.10 3.46
566 696 2.046023 CTGCCGGACATGCTGGAA 60.046 61.111 5.05 7.22 46.81 3.53
625 755 1.672356 CTGCTGGCAAGGCTTACGT 60.672 57.895 0.00 0.00 0.00 3.57
656 786 2.110899 ACAGAGGAGACAGGAGAAGGAA 59.889 50.000 0.00 0.00 0.00 3.36
710 840 3.087031 CAACCAATGCAGACAGGAGATT 58.913 45.455 0.00 0.00 0.00 2.40
715 845 1.901591 AGACAACCAATGCAGACAGG 58.098 50.000 0.00 0.00 0.00 4.00
716 846 2.417933 GCTAGACAACCAATGCAGACAG 59.582 50.000 0.00 0.00 0.00 3.51
717 847 2.224499 TGCTAGACAACCAATGCAGACA 60.224 45.455 0.00 0.00 0.00 3.41
718 848 2.426522 TGCTAGACAACCAATGCAGAC 58.573 47.619 0.00 0.00 0.00 3.51
719 849 2.857186 TGCTAGACAACCAATGCAGA 57.143 45.000 0.00 0.00 0.00 4.26
720 850 3.693085 AGAATGCTAGACAACCAATGCAG 59.307 43.478 0.00 0.00 33.87 4.41
721 851 3.441222 CAGAATGCTAGACAACCAATGCA 59.559 43.478 0.00 0.00 34.88 3.96
722 852 3.181493 CCAGAATGCTAGACAACCAATGC 60.181 47.826 0.00 0.00 31.97 3.56
723 853 3.181493 GCCAGAATGCTAGACAACCAATG 60.181 47.826 0.00 0.00 31.97 2.82
724 854 3.019564 GCCAGAATGCTAGACAACCAAT 58.980 45.455 0.00 0.00 31.97 3.16
725 855 2.224744 TGCCAGAATGCTAGACAACCAA 60.225 45.455 0.00 0.00 31.97 3.67
726 856 1.350684 TGCCAGAATGCTAGACAACCA 59.649 47.619 0.00 0.00 31.97 3.67
727 857 2.113860 TGCCAGAATGCTAGACAACC 57.886 50.000 0.00 0.00 31.97 3.77
728 858 3.273434 TCATGCCAGAATGCTAGACAAC 58.727 45.455 0.00 0.00 31.97 3.32
729 859 3.632643 TCATGCCAGAATGCTAGACAA 57.367 42.857 0.00 0.00 31.97 3.18
730 860 3.135167 TCATCATGCCAGAATGCTAGACA 59.865 43.478 0.00 0.00 31.97 3.41
731 861 3.497640 GTCATCATGCCAGAATGCTAGAC 59.502 47.826 0.00 0.00 31.97 2.59
732 862 3.495629 GGTCATCATGCCAGAATGCTAGA 60.496 47.826 0.00 0.00 31.97 2.43
733 863 2.812591 GGTCATCATGCCAGAATGCTAG 59.187 50.000 0.00 0.00 31.97 3.42
734 864 2.440627 AGGTCATCATGCCAGAATGCTA 59.559 45.455 1.57 0.00 31.97 3.49
735 865 1.214673 AGGTCATCATGCCAGAATGCT 59.785 47.619 1.57 0.00 31.97 3.79
736 866 1.337071 CAGGTCATCATGCCAGAATGC 59.663 52.381 1.57 0.00 31.97 3.56
737 867 1.954382 CCAGGTCATCATGCCAGAATG 59.046 52.381 1.57 0.00 0.00 2.67
738 868 1.133575 CCCAGGTCATCATGCCAGAAT 60.134 52.381 1.57 0.00 0.00 2.40
739 869 0.256752 CCCAGGTCATCATGCCAGAA 59.743 55.000 1.57 0.00 0.00 3.02
740 870 1.917495 CCCAGGTCATCATGCCAGA 59.083 57.895 1.57 0.00 0.00 3.86
741 871 1.826921 GCCCAGGTCATCATGCCAG 60.827 63.158 1.57 0.00 0.00 4.85
742 872 0.987613 TAGCCCAGGTCATCATGCCA 60.988 55.000 1.57 0.00 0.00 4.92
743 873 0.403271 ATAGCCCAGGTCATCATGCC 59.597 55.000 0.00 0.00 0.00 4.40
744 874 2.283145 AATAGCCCAGGTCATCATGC 57.717 50.000 0.00 0.00 0.00 4.06
745 875 4.070716 GAGAAATAGCCCAGGTCATCATG 58.929 47.826 0.00 0.00 0.00 3.07
746 876 3.073650 GGAGAAATAGCCCAGGTCATCAT 59.926 47.826 0.00 0.00 0.00 2.45
747 877 2.439507 GGAGAAATAGCCCAGGTCATCA 59.560 50.000 0.00 0.00 0.00 3.07
748 878 2.224646 GGGAGAAATAGCCCAGGTCATC 60.225 54.545 0.00 0.00 44.07 2.92
749 879 1.777272 GGGAGAAATAGCCCAGGTCAT 59.223 52.381 0.00 0.00 44.07 3.06
750 880 1.213296 GGGAGAAATAGCCCAGGTCA 58.787 55.000 0.00 0.00 44.07 4.02
751 881 0.474614 GGGGAGAAATAGCCCAGGTC 59.525 60.000 0.00 0.00 46.57 3.85
752 882 0.046397 AGGGGAGAAATAGCCCAGGT 59.954 55.000 0.00 0.00 46.57 4.00
753 883 0.767998 GAGGGGAGAAATAGCCCAGG 59.232 60.000 0.00 0.00 46.57 4.45
754 884 0.767998 GGAGGGGAGAAATAGCCCAG 59.232 60.000 0.00 0.00 46.57 4.45
755 885 0.697854 GGGAGGGGAGAAATAGCCCA 60.698 60.000 0.00 0.00 46.57 5.36
756 886 0.697854 TGGGAGGGGAGAAATAGCCC 60.698 60.000 0.00 0.00 43.91 5.19
757 887 0.474614 GTGGGAGGGGAGAAATAGCC 59.525 60.000 0.00 0.00 0.00 3.93
758 888 1.213296 TGTGGGAGGGGAGAAATAGC 58.787 55.000 0.00 0.00 0.00 2.97
759 889 3.321950 AGATGTGGGAGGGGAGAAATAG 58.678 50.000 0.00 0.00 0.00 1.73
760 890 3.318313 GAGATGTGGGAGGGGAGAAATA 58.682 50.000 0.00 0.00 0.00 1.40
761 891 2.131023 GAGATGTGGGAGGGGAGAAAT 58.869 52.381 0.00 0.00 0.00 2.17
762 892 1.584724 GAGATGTGGGAGGGGAGAAA 58.415 55.000 0.00 0.00 0.00 2.52
763 893 0.326618 GGAGATGTGGGAGGGGAGAA 60.327 60.000 0.00 0.00 0.00 2.87
764 894 1.314867 GGAGATGTGGGAGGGGAGA 59.685 63.158 0.00 0.00 0.00 3.71
765 895 2.136878 CGGAGATGTGGGAGGGGAG 61.137 68.421 0.00 0.00 0.00 4.30
766 896 2.041922 CGGAGATGTGGGAGGGGA 60.042 66.667 0.00 0.00 0.00 4.81
767 897 2.041922 TCGGAGATGTGGGAGGGG 60.042 66.667 0.00 0.00 0.00 4.79
768 898 2.801631 GCTCGGAGATGTGGGAGGG 61.802 68.421 9.69 0.00 33.89 4.30
769 899 2.801631 GGCTCGGAGATGTGGGAGG 61.802 68.421 9.69 0.00 33.89 4.30
770 900 2.818132 GGCTCGGAGATGTGGGAG 59.182 66.667 9.69 0.00 33.89 4.30
771 901 3.147595 CGGCTCGGAGATGTGGGA 61.148 66.667 9.69 0.00 33.89 4.37
927 1063 1.987855 TCGGTAGGGTTGGCAGAGG 60.988 63.158 0.00 0.00 0.00 3.69
1380 2028 0.393808 GAAACCCTAGGAATGCCGCA 60.394 55.000 11.48 0.00 39.96 5.69
1428 2076 3.435671 CGTACCAACTAAAAAGGAGCCTG 59.564 47.826 0.00 0.00 0.00 4.85
1455 2103 1.374125 ATCGCAGCACACGTAAGCA 60.374 52.632 13.06 0.00 45.62 3.91
1470 2119 2.201732 CGGATGGAACCTACAACATCG 58.798 52.381 0.00 0.00 40.36 3.84
1598 2247 5.734855 ACGCCATTACTTACACAATCATC 57.265 39.130 0.00 0.00 0.00 2.92
1631 2280 1.372499 GCTACCACACGAAGTCGCA 60.372 57.895 0.00 0.00 41.61 5.10
1652 2301 6.597672 TGGCTACACATAAATAACAGGACAAG 59.402 38.462 0.00 0.00 0.00 3.16
1655 2304 6.359480 GTGGCTACACATAAATAACAGGAC 57.641 41.667 0.00 0.00 46.90 3.85
1741 2392 7.129109 AGACAATTTTGTACCACGAATACAG 57.871 36.000 0.00 0.00 42.43 2.74
1773 2424 8.665685 AGACAATTTTGTATCACGAATAAGGTC 58.334 33.333 0.00 0.00 42.43 3.85
1779 2430 6.183360 GGTCGAGACAATTTTGTATCACGAAT 60.183 38.462 15.87 0.00 46.68 3.34
1786 2437 5.354234 GGTCATGGTCGAGACAATTTTGTAT 59.646 40.000 5.55 0.00 42.43 2.29
1919 2570 0.921896 AGCCCCACTATGAAGCATGT 59.078 50.000 0.00 0.00 0.00 3.21
2087 2743 4.133820 TCATTGACACCAATTGAAGACGT 58.866 39.130 7.12 0.00 40.81 4.34
2088 2744 4.747540 TCATTGACACCAATTGAAGACG 57.252 40.909 7.12 0.00 40.81 4.18
2090 2746 5.472148 GCATTCATTGACACCAATTGAAGA 58.528 37.500 7.12 0.00 40.81 2.87
2151 2807 7.390823 TGGATTCTACTAGTGCAACAAACATA 58.609 34.615 5.39 0.00 41.43 2.29
2365 3056 6.611613 TGTTATGCAAATTAATGGAACCCA 57.388 33.333 0.00 0.00 38.19 4.51
2482 3182 7.657761 ACATAAGTATGAAAAGATTAGAGGGCG 59.342 37.037 5.33 0.00 37.15 6.13
2491 3191 8.993121 CGGCAGATAACATAAGTATGAAAAGAT 58.007 33.333 5.33 0.00 37.15 2.40
2492 3192 7.042051 GCGGCAGATAACATAAGTATGAAAAGA 60.042 37.037 5.33 0.00 37.15 2.52
2493 3193 7.072030 GCGGCAGATAACATAAGTATGAAAAG 58.928 38.462 5.33 0.00 37.15 2.27
2495 3195 6.052360 TGCGGCAGATAACATAAGTATGAAA 58.948 36.000 0.00 0.00 37.15 2.69
2497 3197 5.208463 TGCGGCAGATAACATAAGTATGA 57.792 39.130 0.00 0.00 37.15 2.15
2498 3198 6.369890 AGAATGCGGCAGATAACATAAGTATG 59.630 38.462 9.25 0.00 39.55 2.39
2499 3199 6.369890 CAGAATGCGGCAGATAACATAAGTAT 59.630 38.462 9.25 0.00 0.00 2.12
2500 3200 5.696270 CAGAATGCGGCAGATAACATAAGTA 59.304 40.000 9.25 0.00 0.00 2.24
2501 3201 4.512944 CAGAATGCGGCAGATAACATAAGT 59.487 41.667 9.25 0.00 0.00 2.24
2502 3202 5.027206 CAGAATGCGGCAGATAACATAAG 57.973 43.478 9.25 0.00 0.00 1.73
2546 3254 1.279271 AGGGCACAGTTGGTCAGTATC 59.721 52.381 0.00 0.00 0.00 2.24
2584 3292 8.791327 TCTTTGCATGTGTCTCTATTTGATTA 57.209 30.769 0.00 0.00 0.00 1.75
2598 3306 4.806330 AGCTTCAAGAATCTTTGCATGTG 58.194 39.130 12.52 0.00 0.00 3.21
2636 3344 2.891191 AAGGTCCCCGCATTTAGAAA 57.109 45.000 0.00 0.00 0.00 2.52
2674 3382 8.960591 AGCATAACTTCAGCTACAACATAAATT 58.039 29.630 0.00 0.00 36.73 1.82
2691 3399 6.884295 TCATAAGCAGGTAACAAGCATAACTT 59.116 34.615 0.00 0.00 41.70 2.66
2728 3436 6.564557 ACTATACGGAGAAATAAAACCCCA 57.435 37.500 0.00 0.00 0.00 4.96
2745 3453 8.889717 TGCAGGACTAATTAAAGCAAACTATAC 58.110 33.333 0.00 0.00 0.00 1.47
2828 3536 3.423539 TCTTAAAGCATGCCAGTCAGT 57.576 42.857 15.66 0.00 0.00 3.41
2884 3599 7.678947 AATATCTCACAAGTGTCTGGAAAAG 57.321 36.000 0.00 0.00 0.00 2.27
2933 3648 7.167968 ACAAAATAATATTGCAGCGCAGTATTG 59.832 33.333 25.94 18.53 45.92 1.90
2963 3684 4.513318 GTCCTGAAAAGAAGTGACCAGAAG 59.487 45.833 0.00 0.00 0.00 2.85
3147 3868 4.525996 ACACAATTATAGGACATGCAGCA 58.474 39.130 0.00 0.00 0.00 4.41
3183 3904 6.082338 GCTGACACAGATAACATTGTCAAAG 58.918 40.000 4.93 0.00 45.78 2.77
3186 3907 4.002982 GGCTGACACAGATAACATTGTCA 58.997 43.478 2.81 3.45 44.68 3.58
3214 3935 2.992593 TGCCGGCATAGTCAAAACATA 58.007 42.857 29.03 0.00 0.00 2.29
3236 3957 0.248843 TGTGTGGATGCGATGCAGTA 59.751 50.000 0.00 0.00 43.65 2.74
3292 4013 9.281371 CTTCCATGATAACAGTTCATATGTCAT 57.719 33.333 1.90 0.00 32.63 3.06
3329 4050 4.755123 GCAACGGAGGTAGCATTTGTATAT 59.245 41.667 0.00 0.00 0.00 0.86
3339 4060 0.107654 AATCAGGCAACGGAGGTAGC 60.108 55.000 0.00 0.00 46.40 3.58
3347 4068 1.247567 AAGGGTTCAATCAGGCAACG 58.752 50.000 0.00 0.00 46.39 4.10
3485 4223 6.655078 AATCTACAAGTGCCAACTGAAAAT 57.345 33.333 0.00 0.00 36.51 1.82
3686 4427 5.754406 GCAGCATAAATTGGCATGAAATACA 59.246 36.000 0.00 0.00 0.00 2.29
3687 4428 5.987347 AGCAGCATAAATTGGCATGAAATAC 59.013 36.000 0.00 0.00 0.00 1.89
3706 4448 4.296690 GCATAAAATGAAGGATCAGCAGC 58.703 43.478 0.00 0.00 39.39 5.25
3707 4449 4.583489 AGGCATAAAATGAAGGATCAGCAG 59.417 41.667 0.00 0.00 39.39 4.24
3841 4583 0.106967 GGAGAATGCAAGGAGGACCC 60.107 60.000 0.00 0.00 36.73 4.46
3926 4668 5.189928 ACATTTATCAAGGTACCGATGCAA 58.810 37.500 6.18 5.14 0.00 4.08
4034 4805 3.128068 TCATCAAAGCACTGTCATCATGC 59.872 43.478 0.00 0.00 39.74 4.06
4162 4933 2.809446 GTTGGTGGACTTCAACTTTGC 58.191 47.619 0.00 0.00 39.85 3.68
4256 5027 3.232213 TCTAGTGCTTTGATCACCGAC 57.768 47.619 0.00 0.00 35.14 4.79
4258 5029 3.935203 ACATTCTAGTGCTTTGATCACCG 59.065 43.478 0.00 0.00 35.14 4.94
4270 5041 5.618056 ACATGCAGTCAAACATTCTAGTG 57.382 39.130 0.00 0.00 0.00 2.74
4359 5132 9.736819 AGGGGGAAAATTGAACCATATAATTAA 57.263 29.630 0.00 0.00 0.00 1.40
4362 5135 8.742437 TCTAGGGGGAAAATTGAACCATATAAT 58.258 33.333 0.00 0.00 0.00 1.28
4395 5169 3.452264 AGAAGTGCACAGCCACAGATATA 59.548 43.478 21.04 0.00 38.18 0.86
4397 5171 1.625315 AGAAGTGCACAGCCACAGATA 59.375 47.619 21.04 0.00 38.18 1.98
4398 5172 0.399454 AGAAGTGCACAGCCACAGAT 59.601 50.000 21.04 0.00 38.18 2.90
4399 5173 0.250038 GAGAAGTGCACAGCCACAGA 60.250 55.000 21.04 0.00 38.18 3.41
4400 5174 0.533531 TGAGAAGTGCACAGCCACAG 60.534 55.000 21.04 0.00 38.18 3.66
4401 5175 0.533531 CTGAGAAGTGCACAGCCACA 60.534 55.000 21.04 10.77 38.18 4.17
4402 5176 0.533755 ACTGAGAAGTGCACAGCCAC 60.534 55.000 21.04 6.62 38.58 5.01
4405 5179 3.427161 AAAAACTGAGAAGTGCACAGC 57.573 42.857 21.04 10.32 38.58 4.40
4616 5390 0.176680 AGCAACGCGAGATGGAAGAT 59.823 50.000 15.93 0.00 34.07 2.40
4621 5395 2.806856 GCAGAGCAACGCGAGATGG 61.807 63.158 15.93 0.00 34.07 3.51
4628 5402 1.630244 CTACCACTGCAGAGCAACGC 61.630 60.000 23.35 0.00 38.41 4.84
4669 5443 3.071602 ACCTAGTATTTGAGCATCCGCAT 59.928 43.478 0.00 0.00 42.27 4.73
4670 5444 2.434336 ACCTAGTATTTGAGCATCCGCA 59.566 45.455 0.00 0.00 42.27 5.69
4716 5490 5.652014 TGAACATGCAGAAAATAGTAAGGGG 59.348 40.000 0.00 0.00 0.00 4.79
4754 5528 3.539604 CTTTCTCCAGGTAAGGCATCAG 58.460 50.000 0.00 0.00 0.00 2.90
4875 5649 9.191181 TAGTCAACACTGCCAGTATGGAACTAG 62.191 44.444 0.00 0.00 29.50 2.57
4947 5721 7.496529 TCCAGAAAATGTAAAGAGTGAACAG 57.503 36.000 0.00 0.00 0.00 3.16
4976 5750 4.081309 CGGAGGGAGTAGAAACCAATAACA 60.081 45.833 0.00 0.00 0.00 2.41
4977 5751 4.081254 ACGGAGGGAGTAGAAACCAATAAC 60.081 45.833 0.00 0.00 0.00 1.89
5044 5818 7.236847 TCCTTCCGTCCCATAATATAAGATGTT 59.763 37.037 0.00 0.00 0.00 2.71
5047 5821 6.960542 ACTCCTTCCGTCCCATAATATAAGAT 59.039 38.462 0.00 0.00 0.00 2.40
5051 5825 9.947189 AATATACTCCTTCCGTCCCATAATATA 57.053 33.333 0.00 0.00 0.00 0.86
5052 5826 8.855804 AATATACTCCTTCCGTCCCATAATAT 57.144 34.615 0.00 0.00 0.00 1.28
5053 5827 8.674925 AAATATACTCCTTCCGTCCCATAATA 57.325 34.615 0.00 0.00 0.00 0.98
5054 5828 7.569599 AAATATACTCCTTCCGTCCCATAAT 57.430 36.000 0.00 0.00 0.00 1.28
5055 5829 7.383156 AAAATATACTCCTTCCGTCCCATAA 57.617 36.000 0.00 0.00 0.00 1.90
5061 5857 8.713737 AACACTTAAAATATACTCCTTCCGTC 57.286 34.615 0.00 0.00 0.00 4.79
5114 5911 5.185056 GTCATGCAAATACTACCCACCTTTT 59.815 40.000 0.00 0.00 0.00 2.27
5119 5916 6.936900 AGATATGTCATGCAAATACTACCCAC 59.063 38.462 0.00 0.00 0.00 4.61
5123 5920 9.650539 AGATGAGATATGTCATGCAAATACTAC 57.349 33.333 19.32 2.06 37.29 2.73
5216 6016 1.737838 CACATGTCCCGTGTGCTAAT 58.262 50.000 0.00 0.00 43.02 1.73
5217 6017 3.225272 CACATGTCCCGTGTGCTAA 57.775 52.632 0.00 0.00 43.02 3.09
5264 6064 4.794169 AGCATCAACGGTACAATGAAAAC 58.206 39.130 0.00 0.00 0.00 2.43
5269 6069 4.158384 GTGAAAGCATCAACGGTACAATG 58.842 43.478 0.00 0.00 40.50 2.82
5270 6070 3.190535 GGTGAAAGCATCAACGGTACAAT 59.809 43.478 0.00 0.00 40.50 2.71
5310 6111 4.843728 TGGATGATACAAAGGTGAGGAAC 58.156 43.478 0.00 0.00 0.00 3.62
5338 6139 1.600058 ATTCCAATGGGAGGCTCTCA 58.400 50.000 21.29 21.29 46.01 3.27
5339 6140 2.174424 AGAATTCCAATGGGAGGCTCTC 59.826 50.000 15.23 11.70 46.01 3.20
5341 6142 2.744352 AGAATTCCAATGGGAGGCTC 57.256 50.000 5.78 5.78 46.01 4.70
5342 6143 3.479866 AAAGAATTCCAATGGGAGGCT 57.520 42.857 0.65 0.00 46.01 4.58
5462 6263 8.278639 ACAGGGGTATCATTGTTGACATATAAA 58.721 33.333 0.00 0.00 33.85 1.40
5463 6264 7.811282 ACAGGGGTATCATTGTTGACATATAA 58.189 34.615 0.00 0.00 33.85 0.98
5484 6285 8.410141 TCTTTACTTCCAATTACAAACAACAGG 58.590 33.333 0.00 0.00 0.00 4.00
5495 6296 5.652014 CCAGGCATGTCTTTACTTCCAATTA 59.348 40.000 0.00 0.00 0.00 1.40
5589 6395 5.585500 TTTGTTACACATGTCGCTCTTAC 57.415 39.130 0.00 0.00 0.00 2.34
5624 6430 2.951642 CTGTTATGGCCCTATGTGTTGG 59.048 50.000 0.00 0.00 0.00 3.77
5645 6451 5.957798 TGCAGAGATTCATCCATTTGTTTC 58.042 37.500 0.00 0.00 0.00 2.78
5657 6463 6.656270 ACAATCATAACAACTGCAGAGATTCA 59.344 34.615 23.35 0.65 0.00 2.57
5717 6523 8.634475 TGAAGAACGACTCAATATGATTACAG 57.366 34.615 0.00 0.00 0.00 2.74
5803 6611 8.186821 CCAGATGCTTACAGAAAGGATAAAAAG 58.813 37.037 0.00 0.00 45.38 2.27
5849 6665 0.249826 AACCGCAAAATGGCAAGGTG 60.250 50.000 0.00 0.00 29.54 4.00
5879 6695 3.753797 GCTGTTTTACCTGAAGGAGGAAG 59.246 47.826 2.62 0.00 46.33 3.46
5977 6796 1.505477 GCTTCTCATCAGCGGCATCC 61.505 60.000 1.45 0.00 0.00 3.51
5996 6815 0.535797 GTCTCTTCCACGGGGTTAGG 59.464 60.000 2.12 0.00 34.93 2.69
6022 6841 2.596419 CTCGATCTTCACGCTCAAACTC 59.404 50.000 0.00 0.00 0.00 3.01
6025 6844 2.724977 ACTCGATCTTCACGCTCAAA 57.275 45.000 0.00 0.00 0.00 2.69
6055 6874 1.004918 CACTTTCGGCTCTTCGGGT 60.005 57.895 0.00 0.00 0.00 5.28
6118 6937 1.428869 AATTCCTCTGGATCCTCCGG 58.571 55.000 14.23 10.13 44.41 5.14
6151 6970 0.883833 GCTGTGTGACCTTGATTGGG 59.116 55.000 0.00 0.00 0.00 4.12
6154 6973 2.936919 TCAGCTGTGTGACCTTGATT 57.063 45.000 14.67 0.00 0.00 2.57
6179 6998 4.451629 TCGATACTGAAGGTGAGGAAAC 57.548 45.455 0.00 0.00 0.00 2.78
6191 7010 5.705905 TCAGAGAGACAAACTTCGATACTGA 59.294 40.000 0.00 0.00 0.00 3.41
6192 7011 5.944013 TCAGAGAGACAAACTTCGATACTG 58.056 41.667 0.00 0.00 0.00 2.74
6193 7012 6.405286 CCATCAGAGAGACAAACTTCGATACT 60.405 42.308 0.00 0.00 0.00 2.12
6194 7013 5.746245 CCATCAGAGAGACAAACTTCGATAC 59.254 44.000 0.00 0.00 0.00 2.24
6195 7014 5.419155 ACCATCAGAGAGACAAACTTCGATA 59.581 40.000 0.00 0.00 0.00 2.92
6196 7015 4.221703 ACCATCAGAGAGACAAACTTCGAT 59.778 41.667 0.00 0.00 0.00 3.59
6197 7016 3.574396 ACCATCAGAGAGACAAACTTCGA 59.426 43.478 0.00 0.00 0.00 3.71
6198 7017 3.919216 ACCATCAGAGAGACAAACTTCG 58.081 45.455 0.00 0.00 0.00 3.79
6199 7018 5.639931 GGTTACCATCAGAGAGACAAACTTC 59.360 44.000 0.00 0.00 0.00 3.01
6202 7021 4.932200 CAGGTTACCATCAGAGAGACAAAC 59.068 45.833 3.51 0.00 0.00 2.93
6203 7022 4.838423 TCAGGTTACCATCAGAGAGACAAA 59.162 41.667 3.51 0.00 0.00 2.83
6205 7024 4.047627 TCAGGTTACCATCAGAGAGACA 57.952 45.455 3.51 0.00 0.00 3.41
6206 7025 4.739137 GCATCAGGTTACCATCAGAGAGAC 60.739 50.000 3.51 0.00 0.00 3.36
6207 7026 3.386078 GCATCAGGTTACCATCAGAGAGA 59.614 47.826 3.51 0.00 0.00 3.10
6208 7027 3.387374 AGCATCAGGTTACCATCAGAGAG 59.613 47.826 3.51 0.00 0.00 3.20
6210 7029 3.834489 AGCATCAGGTTACCATCAGAG 57.166 47.619 3.51 0.00 0.00 3.35
6213 7032 4.574674 AGAAAGCATCAGGTTACCATCA 57.425 40.909 3.51 0.00 34.49 3.07
6214 7033 5.189180 AGAAGAAAGCATCAGGTTACCATC 58.811 41.667 3.51 0.00 34.49 3.51
6215 7034 5.045286 AGAGAAGAAAGCATCAGGTTACCAT 60.045 40.000 3.51 0.00 34.49 3.55
6216 7035 4.287067 AGAGAAGAAAGCATCAGGTTACCA 59.713 41.667 3.51 0.00 34.49 3.25
6217 7036 4.837972 AGAGAAGAAAGCATCAGGTTACC 58.162 43.478 0.00 0.00 34.49 2.85
6218 7037 5.580297 CAGAGAGAAGAAAGCATCAGGTTAC 59.420 44.000 0.00 0.00 34.49 2.50
6219 7038 5.247110 ACAGAGAGAAGAAAGCATCAGGTTA 59.753 40.000 0.00 0.00 34.49 2.85
6220 7039 4.041444 ACAGAGAGAAGAAAGCATCAGGTT 59.959 41.667 0.00 0.00 36.96 3.50
6221 7040 3.582208 ACAGAGAGAAGAAAGCATCAGGT 59.418 43.478 0.00 0.00 0.00 4.00
6223 7042 4.389382 CACACAGAGAGAAGAAAGCATCAG 59.611 45.833 0.00 0.00 0.00 2.90
6224 7043 4.313282 CACACAGAGAGAAGAAAGCATCA 58.687 43.478 0.00 0.00 0.00 3.07
6225 7044 3.124976 GCACACAGAGAGAAGAAAGCATC 59.875 47.826 0.00 0.00 0.00 3.91
6226 7045 3.072944 GCACACAGAGAGAAGAAAGCAT 58.927 45.455 0.00 0.00 0.00 3.79
6227 7046 2.487934 GCACACAGAGAGAAGAAAGCA 58.512 47.619 0.00 0.00 0.00 3.91
6228 7047 1.458827 CGCACACAGAGAGAAGAAAGC 59.541 52.381 0.00 0.00 0.00 3.51
6229 7048 1.458827 GCGCACACAGAGAGAAGAAAG 59.541 52.381 0.30 0.00 0.00 2.62
6230 7049 1.202521 TGCGCACACAGAGAGAAGAAA 60.203 47.619 5.66 0.00 0.00 2.52
6231 7050 0.389025 TGCGCACACAGAGAGAAGAA 59.611 50.000 5.66 0.00 0.00 2.52
6232 7051 0.038801 CTGCGCACACAGAGAGAAGA 60.039 55.000 5.66 0.00 40.25 2.87
6233 7052 1.624865 GCTGCGCACACAGAGAGAAG 61.625 60.000 5.66 0.00 40.25 2.85
6234 7053 1.665916 GCTGCGCACACAGAGAGAA 60.666 57.895 5.66 0.00 40.25 2.87
6235 7054 2.048784 GCTGCGCACACAGAGAGA 60.049 61.111 5.66 0.00 40.25 3.10
6290 7121 4.082523 TGGAAGGCCCGCTTCTCG 62.083 66.667 0.00 0.00 37.93 4.04
6354 7185 2.172483 TTGAAGGTCTGCTCGCTCCC 62.172 60.000 0.00 0.00 0.00 4.30
6355 7186 0.739112 CTTGAAGGTCTGCTCGCTCC 60.739 60.000 0.00 0.00 0.00 4.70
6395 7226 3.012518 GTCCCACAAGAGGTTGATCATG 58.987 50.000 0.00 0.00 37.10 3.07
6435 7266 1.269413 CGATTTGCAAGATGATGGGGC 60.269 52.381 0.00 0.00 0.00 5.80
6459 7290 0.609131 ACGAAGCCCACCAAGGAATG 60.609 55.000 0.00 0.00 41.22 2.67
6540 7371 2.165167 CCTACCAAGTCTACGACCACA 58.835 52.381 0.00 0.00 32.18 4.17
6565 7400 6.038356 AGAAACATTTTTCACACTTGAGCTG 58.962 36.000 7.08 0.00 43.29 4.24
6591 7426 3.148583 CGACACGACACGACGACG 61.149 66.667 5.58 5.58 45.75 5.12
6592 7427 2.794166 CCGACACGACACGACGAC 60.794 66.667 0.00 0.00 37.03 4.34
6593 7428 3.227372 GACCGACACGACACGACGA 62.227 63.158 0.00 0.00 37.03 4.20
6594 7429 2.775359 ATGACCGACACGACACGACG 62.775 60.000 0.00 0.00 39.31 5.12
6595 7430 1.081641 ATGACCGACACGACACGAC 60.082 57.895 0.00 0.00 0.00 4.34
6633 7468 3.673543 AAGTCCTACTACAGGGAGGAG 57.326 52.381 0.00 0.00 45.58 3.69
6634 7469 5.016031 AGTTAAAGTCCTACTACAGGGAGGA 59.984 44.000 0.00 0.00 45.58 3.71
6654 7489 4.123506 TGTGCATCAAGTCGAACAAGTTA 58.876 39.130 0.00 0.00 0.00 2.24
6655 7490 2.942376 TGTGCATCAAGTCGAACAAGTT 59.058 40.909 0.00 0.00 0.00 2.66
6656 7491 2.560504 TGTGCATCAAGTCGAACAAGT 58.439 42.857 0.00 0.00 0.00 3.16
6657 7492 3.818961 ATGTGCATCAAGTCGAACAAG 57.181 42.857 0.00 0.00 0.00 3.16
6658 7493 5.878332 AATATGTGCATCAAGTCGAACAA 57.122 34.783 0.00 0.00 0.00 2.83
6659 7494 7.279758 TGAATAATATGTGCATCAAGTCGAACA 59.720 33.333 0.00 0.00 0.00 3.18
6693 7528 0.675837 AGCACTCGGTACTAGCACGA 60.676 55.000 0.00 4.33 35.14 4.35
6694 7529 1.003759 CTAGCACTCGGTACTAGCACG 60.004 57.143 0.00 0.00 0.00 5.34
6700 7535 1.920610 AACCACTAGCACTCGGTACT 58.079 50.000 0.00 0.00 0.00 2.73
6705 7540 3.432252 CCAGTAAAAACCACTAGCACTCG 59.568 47.826 0.00 0.00 0.00 4.18
6727 7562 4.953940 ATAACAAGGAGAGAGGATCAGC 57.046 45.455 0.00 0.00 37.82 4.26
6738 7573 8.446273 CAGATTGTTTGACAGTATAACAAGGAG 58.554 37.037 14.61 6.48 42.83 3.69
6745 7580 5.939883 AGCAGCAGATTGTTTGACAGTATAA 59.060 36.000 0.00 0.00 0.00 0.98
6746 7581 5.491070 AGCAGCAGATTGTTTGACAGTATA 58.509 37.500 0.00 0.00 0.00 1.47
6748 7583 3.743521 AGCAGCAGATTGTTTGACAGTA 58.256 40.909 0.00 0.00 0.00 2.74
6750 7585 3.637998 AAGCAGCAGATTGTTTGACAG 57.362 42.857 0.00 0.00 0.00 3.51
6758 7593 3.426426 GCTCTGAGAAAAGCAGCAGATTG 60.426 47.826 9.28 0.00 36.85 2.67
6762 7597 1.810959 AGCTCTGAGAAAAGCAGCAG 58.189 50.000 9.28 0.00 41.06 4.24
6763 7598 3.407424 TTAGCTCTGAGAAAAGCAGCA 57.593 42.857 9.28 0.00 41.06 4.41
6766 7601 6.204882 GGTTAGTTTTAGCTCTGAGAAAAGCA 59.795 38.462 9.28 0.00 41.06 3.91
6810 7671 0.716108 CGTCATCTGCACGAAGTTCC 59.284 55.000 0.00 0.00 41.61 3.62
6822 7683 0.321671 CCAGTTCACCACCGTCATCT 59.678 55.000 0.00 0.00 0.00 2.90
6833 7694 1.207089 TCGATCCCATCACCAGTTCAC 59.793 52.381 0.00 0.00 0.00 3.18
6837 7698 1.690893 CTGATCGATCCCATCACCAGT 59.309 52.381 22.31 0.00 0.00 4.00
6838 7699 1.966354 TCTGATCGATCCCATCACCAG 59.034 52.381 22.31 11.02 0.00 4.00
6839 7700 1.688735 GTCTGATCGATCCCATCACCA 59.311 52.381 22.31 1.00 0.00 4.17
6860 7721 0.598065 AATTGACGGAGGCAAAGCAC 59.402 50.000 0.00 0.00 0.00 4.40
6980 7849 1.377536 GTTCTCCAATCAGCTCAGCC 58.622 55.000 0.00 0.00 0.00 4.85
6981 7850 1.005340 CGTTCTCCAATCAGCTCAGC 58.995 55.000 0.00 0.00 0.00 4.26
6982 7851 1.649664 CCGTTCTCCAATCAGCTCAG 58.350 55.000 0.00 0.00 0.00 3.35
6983 7852 0.391661 GCCGTTCTCCAATCAGCTCA 60.392 55.000 0.00 0.00 0.00 4.26
6984 7853 1.424493 CGCCGTTCTCCAATCAGCTC 61.424 60.000 0.00 0.00 0.00 4.09
7024 9245 4.093952 CTGCCGGTCAAAGCGCTG 62.094 66.667 12.58 0.00 37.85 5.18
7027 9248 4.093952 CTGCTGCCGGTCAAAGCG 62.094 66.667 1.90 1.30 39.88 4.68
7028 9249 2.669569 TCTGCTGCCGGTCAAAGC 60.670 61.111 1.90 8.47 37.46 3.51
7030 9251 2.669569 GCTCTGCTGCCGGTCAAA 60.670 61.111 1.90 0.00 0.00 2.69
7047 9274 2.006805 AATCATAAGCCCCACCCCCG 62.007 60.000 0.00 0.00 0.00 5.73
7142 9369 3.782244 GCAAGCGAGTGAGTGGCG 61.782 66.667 0.00 0.00 34.44 5.69
7143 9370 2.253758 TTGCAAGCGAGTGAGTGGC 61.254 57.895 0.00 0.00 0.00 5.01
7144 9371 1.571460 GTTGCAAGCGAGTGAGTGG 59.429 57.895 0.00 0.00 0.00 4.00
7145 9372 1.571460 GGTTGCAAGCGAGTGAGTG 59.429 57.895 13.62 0.00 0.00 3.51
7146 9373 1.598130 GGGTTGCAAGCGAGTGAGT 60.598 57.895 21.43 0.00 0.00 3.41
7147 9374 2.328099 GGGGTTGCAAGCGAGTGAG 61.328 63.158 21.43 0.00 0.00 3.51
7148 9375 2.281484 GGGGTTGCAAGCGAGTGA 60.281 61.111 21.43 0.00 0.00 3.41
7149 9376 3.365265 GGGGGTTGCAAGCGAGTG 61.365 66.667 21.43 0.00 0.00 3.51
7150 9377 3.884774 TGGGGGTTGCAAGCGAGT 61.885 61.111 21.43 0.00 0.00 4.18
7151 9378 3.365265 GTGGGGGTTGCAAGCGAG 61.365 66.667 21.43 0.00 0.00 5.03
7152 9379 4.966787 GGTGGGGGTTGCAAGCGA 62.967 66.667 21.43 6.08 0.00 4.93
7154 9381 4.621087 AGGGTGGGGGTTGCAAGC 62.621 66.667 20.26 20.26 0.00 4.01
7155 9382 2.283173 GAGGGTGGGGGTTGCAAG 60.283 66.667 0.00 0.00 0.00 4.01
7156 9383 2.780924 AGAGGGTGGGGGTTGCAA 60.781 61.111 0.00 0.00 0.00 4.08
7229 9472 1.138859 CTCTCTCTCTCTCTCGGCTGA 59.861 57.143 0.00 0.00 0.00 4.26
7230 9473 1.138859 TCTCTCTCTCTCTCTCGGCTG 59.861 57.143 0.00 0.00 0.00 4.85
7234 9477 2.610479 CCCGATCTCTCTCTCTCTCTCG 60.610 59.091 0.00 0.00 0.00 4.04
7235 9478 2.368875 ACCCGATCTCTCTCTCTCTCTC 59.631 54.545 0.00 0.00 0.00 3.20
7236 9479 2.408565 ACCCGATCTCTCTCTCTCTCT 58.591 52.381 0.00 0.00 0.00 3.10
7237 9480 2.878406 CAACCCGATCTCTCTCTCTCTC 59.122 54.545 0.00 0.00 0.00 3.20
7238 9481 2.422803 CCAACCCGATCTCTCTCTCTCT 60.423 54.545 0.00 0.00 0.00 3.10
7239 9482 1.953686 CCAACCCGATCTCTCTCTCTC 59.046 57.143 0.00 0.00 0.00 3.20
7240 9483 1.286553 ACCAACCCGATCTCTCTCTCT 59.713 52.381 0.00 0.00 0.00 3.10
7241 9484 1.770294 ACCAACCCGATCTCTCTCTC 58.230 55.000 0.00 0.00 0.00 3.20
7242 9485 2.234908 CAAACCAACCCGATCTCTCTCT 59.765 50.000 0.00 0.00 0.00 3.10
7243 9486 2.622436 CAAACCAACCCGATCTCTCTC 58.378 52.381 0.00 0.00 0.00 3.20
7293 9570 4.266070 ACCGGTCGATCGATGCCG 62.266 66.667 30.03 30.03 43.40 5.69
7294 9571 2.354773 GACCGGTCGATCGATGCC 60.355 66.667 21.90 17.34 0.00 4.40
7295 9572 2.354773 GGACCGGTCGATCGATGC 60.355 66.667 27.68 2.87 0.00 3.91
7296 9573 0.387367 GATGGACCGGTCGATCGATG 60.387 60.000 34.48 16.40 35.65 3.84
7297 9574 0.537600 AGATGGACCGGTCGATCGAT 60.538 55.000 37.98 26.61 45.59 3.59
7298 9575 1.153025 AGATGGACCGGTCGATCGA 60.153 57.895 37.98 15.15 45.59 3.59
7299 9576 1.283181 GAGATGGACCGGTCGATCG 59.717 63.158 37.98 12.09 45.59 3.69
7300 9577 1.660917 GGAGATGGACCGGTCGATC 59.339 63.158 38.20 38.20 42.70 3.69
7301 9578 2.194212 CGGAGATGGACCGGTCGAT 61.194 63.158 29.57 29.57 45.65 3.59
7302 9579 2.827190 CGGAGATGGACCGGTCGA 60.827 66.667 27.68 25.05 45.65 4.20
7308 9585 1.660917 GTCGGATCGGAGATGGACC 59.339 63.158 2.75 0.00 45.12 4.46
7309 9586 1.660917 GGTCGGATCGGAGATGGAC 59.339 63.158 2.75 0.00 45.12 4.02
7310 9587 1.897137 CGGTCGGATCGGAGATGGA 60.897 63.158 1.94 0.00 45.12 3.41
7311 9588 1.897137 TCGGTCGGATCGGAGATGG 60.897 63.158 11.21 0.00 45.12 3.51
7312 9589 1.283181 GTCGGTCGGATCGGAGATG 59.717 63.158 11.21 0.00 45.12 2.90
7313 9590 2.252346 CGTCGGTCGGATCGGAGAT 61.252 63.158 11.21 0.00 37.30 2.75
7314 9591 2.893895 CGTCGGTCGGATCGGAGA 60.894 66.667 11.21 0.00 37.01 3.71
7315 9592 4.609247 GCGTCGGTCGGATCGGAG 62.609 72.222 11.21 6.39 40.26 4.63
7331 9608 2.231618 GCGAACTAGCTAGTGGCGC 61.232 63.158 36.77 36.77 46.04 6.53
7357 9634 2.879070 GATGAGCATGGCGTCGCAG 61.879 63.158 20.50 9.32 0.00 5.18
7358 9635 2.891936 GATGAGCATGGCGTCGCA 60.892 61.111 20.50 5.66 0.00 5.10
7359 9636 3.643978 GGATGAGCATGGCGTCGC 61.644 66.667 9.22 9.22 0.00 5.19
7360 9637 3.333189 CGGATGAGCATGGCGTCG 61.333 66.667 0.00 0.00 0.00 5.12
7361 9638 2.202932 ACGGATGAGCATGGCGTC 60.203 61.111 0.00 0.00 0.00 5.19
7362 9639 2.202932 GACGGATGAGCATGGCGT 60.203 61.111 0.00 0.00 0.00 5.68
7363 9640 2.969238 GGACGGATGAGCATGGCG 60.969 66.667 0.00 0.00 0.00 5.69
7364 9641 2.363711 TACGGACGGATGAGCATGGC 62.364 60.000 0.00 0.00 0.00 4.40
7365 9642 0.104120 TTACGGACGGATGAGCATGG 59.896 55.000 0.00 0.00 0.00 3.66
7366 9643 1.202417 AGTTACGGACGGATGAGCATG 60.202 52.381 0.00 0.00 0.00 4.06
7367 9644 1.112113 AGTTACGGACGGATGAGCAT 58.888 50.000 0.00 0.00 0.00 3.79
7368 9645 0.892755 AAGTTACGGACGGATGAGCA 59.107 50.000 0.00 0.00 0.00 4.26
7369 9646 1.278238 CAAGTTACGGACGGATGAGC 58.722 55.000 0.00 0.00 0.00 4.26
7370 9647 1.278238 GCAAGTTACGGACGGATGAG 58.722 55.000 0.00 0.00 0.00 2.90
7371 9648 0.108520 GGCAAGTTACGGACGGATGA 60.109 55.000 0.00 0.00 0.00 2.92
7372 9649 0.108329 AGGCAAGTTACGGACGGATG 60.108 55.000 0.00 0.00 0.00 3.51
7373 9650 1.477553 TAGGCAAGTTACGGACGGAT 58.522 50.000 0.00 0.00 0.00 4.18
7374 9651 1.067635 GTTAGGCAAGTTACGGACGGA 60.068 52.381 0.00 0.00 0.00 4.69
7375 9652 1.353076 GTTAGGCAAGTTACGGACGG 58.647 55.000 0.00 0.00 0.00 4.79
7376 9653 0.986992 CGTTAGGCAAGTTACGGACG 59.013 55.000 0.00 0.00 0.00 4.79
7377 9654 2.352503 TCGTTAGGCAAGTTACGGAC 57.647 50.000 0.00 0.00 34.93 4.79
7378 9655 2.756760 AGATCGTTAGGCAAGTTACGGA 59.243 45.455 0.00 0.00 34.93 4.69
7379 9656 3.114065 GAGATCGTTAGGCAAGTTACGG 58.886 50.000 0.00 0.00 34.93 4.02
7380 9657 4.030134 AGAGATCGTTAGGCAAGTTACG 57.970 45.455 0.00 0.00 35.46 3.18
7381 9658 4.804665 GGAAGAGATCGTTAGGCAAGTTAC 59.195 45.833 0.00 0.00 0.00 2.50
7382 9659 4.710375 AGGAAGAGATCGTTAGGCAAGTTA 59.290 41.667 0.00 0.00 0.00 2.24
7383 9660 3.515901 AGGAAGAGATCGTTAGGCAAGTT 59.484 43.478 0.00 0.00 0.00 2.66
7384 9661 3.100671 AGGAAGAGATCGTTAGGCAAGT 58.899 45.455 0.00 0.00 0.00 3.16
7385 9662 3.131223 TGAGGAAGAGATCGTTAGGCAAG 59.869 47.826 0.00 0.00 0.00 4.01
7386 9663 3.096852 TGAGGAAGAGATCGTTAGGCAA 58.903 45.455 0.00 0.00 0.00 4.52
7387 9664 2.735151 TGAGGAAGAGATCGTTAGGCA 58.265 47.619 0.00 0.00 0.00 4.75
7388 9665 4.038642 AGAATGAGGAAGAGATCGTTAGGC 59.961 45.833 0.00 0.00 0.00 3.93
7389 9666 5.300539 TGAGAATGAGGAAGAGATCGTTAGG 59.699 44.000 0.00 0.00 0.00 2.69
7390 9667 6.384258 TGAGAATGAGGAAGAGATCGTTAG 57.616 41.667 0.00 0.00 0.00 2.34
7391 9668 6.015856 GGATGAGAATGAGGAAGAGATCGTTA 60.016 42.308 0.00 0.00 0.00 3.18
7392 9669 5.221422 GGATGAGAATGAGGAAGAGATCGTT 60.221 44.000 0.00 0.00 0.00 3.85
7393 9670 4.280677 GGATGAGAATGAGGAAGAGATCGT 59.719 45.833 0.00 0.00 0.00 3.73
7394 9671 4.523943 AGGATGAGAATGAGGAAGAGATCG 59.476 45.833 0.00 0.00 0.00 3.69
7395 9672 5.539574 TCAGGATGAGAATGAGGAAGAGATC 59.460 44.000 0.00 0.00 42.56 2.75
7396 9673 5.465901 TCAGGATGAGAATGAGGAAGAGAT 58.534 41.667 0.00 0.00 42.56 2.75
7397 9674 4.876580 TCAGGATGAGAATGAGGAAGAGA 58.123 43.478 0.00 0.00 42.56 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.