Multiple sequence alignment - TraesCS2B01G578900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G578900 chr2B 100.000 2497 0 0 1 2497 767055976 767053480 0.000000e+00 4612
1 TraesCS2B01G578900 chr2B 95.642 1285 43 9 1216 2497 546410986 546412260 0.000000e+00 2050
2 TraesCS2B01G578900 chr2B 95.417 480 19 2 1 478 45050586 45050108 0.000000e+00 761
3 TraesCS2B01G578900 chr2B 95.228 482 21 1 1 480 767063017 767062536 0.000000e+00 761
4 TraesCS2B01G578900 chr2D 96.423 1286 35 5 1216 2494 610931327 610932608 0.000000e+00 2109
5 TraesCS2B01G578900 chr2D 95.649 1287 43 7 1216 2494 64509399 64510680 0.000000e+00 2054
6 TraesCS2B01G578900 chr2D 95.186 644 29 1 572 1213 64508701 64509344 0.000000e+00 1016
7 TraesCS2B01G578900 chr7B 95.578 1289 41 8 1216 2494 22314340 22315622 0.000000e+00 2050
8 TraesCS2B01G578900 chr7B 95.209 647 28 2 572 1216 677862787 677862142 0.000000e+00 1020
9 TraesCS2B01G578900 chr1B 95.497 1288 45 8 1216 2494 672222471 672223754 0.000000e+00 2045
10 TraesCS2B01G578900 chr1B 95.345 1289 45 7 1216 2494 542265639 542266922 0.000000e+00 2034
11 TraesCS2B01G578900 chr1B 95.349 645 27 2 574 1216 427497266 427496623 0.000000e+00 1022
12 TraesCS2B01G578900 chr1B 95.209 647 29 2 572 1218 671392213 671392857 0.000000e+00 1022
13 TraesCS2B01G578900 chr1B 95.417 480 20 1 1 478 414752860 414753339 0.000000e+00 763
14 TraesCS2B01G578900 chr5B 95.426 1290 45 7 1216 2497 26058679 26057396 0.000000e+00 2043
15 TraesCS2B01G578900 chr5B 95.969 645 26 0 572 1216 682395993 682395349 0.000000e+00 1048
16 TraesCS2B01G578900 chr5B 95.054 647 30 1 572 1216 317969018 317969664 0.000000e+00 1016
17 TraesCS2B01G578900 chr5B 95.156 640 31 0 575 1214 26059372 26058733 0.000000e+00 1011
18 TraesCS2B01G578900 chr5B 95.021 482 22 1 1 480 644113154 644112673 0.000000e+00 756
19 TraesCS2B01G578900 chr5B 95.000 480 22 1 1 478 690164225 690164704 0.000000e+00 752
20 TraesCS2B01G578900 chrUn 94.896 1293 47 10 1216 2494 60559410 60560697 0.000000e+00 2004
21 TraesCS2B01G578900 chr3B 94.479 1304 55 11 1202 2494 687040752 687042049 0.000000e+00 1993
22 TraesCS2B01G578900 chr3B 95.209 647 29 1 572 1216 594400313 594399667 0.000000e+00 1022
23 TraesCS2B01G578900 chr4A 95.039 645 32 0 572 1216 705529249 705528605 0.000000e+00 1014
24 TraesCS2B01G578900 chr6B 95.625 480 19 1 1 478 153486256 153485777 0.000000e+00 769
25 TraesCS2B01G578900 chr6B 95.228 482 21 1 1 480 96383255 96383736 0.000000e+00 761
26 TraesCS2B01G578900 chr6B 94.523 493 24 2 1 491 632938366 632937875 0.000000e+00 758
27 TraesCS2B01G578900 chr6B 86.598 97 7 4 479 569 529708274 529708370 4.390000e-18 102
28 TraesCS2B01G578900 chr4B 95.021 482 22 2 1 480 498531973 498532454 0.000000e+00 756


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G578900 chr2B 767053480 767055976 2496 True 4612 4612 100.0000 1 2497 1 chr2B.!!$R2 2496
1 TraesCS2B01G578900 chr2B 546410986 546412260 1274 False 2050 2050 95.6420 1216 2497 1 chr2B.!!$F1 1281
2 TraesCS2B01G578900 chr2D 610931327 610932608 1281 False 2109 2109 96.4230 1216 2494 1 chr2D.!!$F1 1278
3 TraesCS2B01G578900 chr2D 64508701 64510680 1979 False 1535 2054 95.4175 572 2494 2 chr2D.!!$F2 1922
4 TraesCS2B01G578900 chr7B 22314340 22315622 1282 False 2050 2050 95.5780 1216 2494 1 chr7B.!!$F1 1278
5 TraesCS2B01G578900 chr7B 677862142 677862787 645 True 1020 1020 95.2090 572 1216 1 chr7B.!!$R1 644
6 TraesCS2B01G578900 chr1B 672222471 672223754 1283 False 2045 2045 95.4970 1216 2494 1 chr1B.!!$F4 1278
7 TraesCS2B01G578900 chr1B 542265639 542266922 1283 False 2034 2034 95.3450 1216 2494 1 chr1B.!!$F2 1278
8 TraesCS2B01G578900 chr1B 427496623 427497266 643 True 1022 1022 95.3490 574 1216 1 chr1B.!!$R1 642
9 TraesCS2B01G578900 chr1B 671392213 671392857 644 False 1022 1022 95.2090 572 1218 1 chr1B.!!$F3 646
10 TraesCS2B01G578900 chr5B 26057396 26059372 1976 True 1527 2043 95.2910 575 2497 2 chr5B.!!$R3 1922
11 TraesCS2B01G578900 chr5B 682395349 682395993 644 True 1048 1048 95.9690 572 1216 1 chr5B.!!$R2 644
12 TraesCS2B01G578900 chr5B 317969018 317969664 646 False 1016 1016 95.0540 572 1216 1 chr5B.!!$F1 644
13 TraesCS2B01G578900 chrUn 60559410 60560697 1287 False 2004 2004 94.8960 1216 2494 1 chrUn.!!$F1 1278
14 TraesCS2B01G578900 chr3B 687040752 687042049 1297 False 1993 1993 94.4790 1202 2494 1 chr3B.!!$F1 1292
15 TraesCS2B01G578900 chr3B 594399667 594400313 646 True 1022 1022 95.2090 572 1216 1 chr3B.!!$R1 644
16 TraesCS2B01G578900 chr4A 705528605 705529249 644 True 1014 1014 95.0390 572 1216 1 chr4A.!!$R1 644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.033601 TGCCAACCCAACAGACACTT 60.034 50.0 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 2048 2.159085 GCATTCTGTCCTAGCGGTTACT 60.159 50.0 0.0 0.0 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.103208 ATCCCAGTCTCGATTCGTGC 59.897 55.000 5.89 0.85 0.00 5.34
20 21 1.519455 CCCAGTCTCGATTCGTGCC 60.519 63.158 5.89 0.00 0.00 5.01
21 22 1.215382 CCAGTCTCGATTCGTGCCA 59.785 57.895 5.89 0.00 0.00 4.92
22 23 0.389817 CCAGTCTCGATTCGTGCCAA 60.390 55.000 5.89 0.00 0.00 4.52
23 24 0.716108 CAGTCTCGATTCGTGCCAAC 59.284 55.000 5.89 0.00 0.00 3.77
24 25 0.389948 AGTCTCGATTCGTGCCAACC 60.390 55.000 5.89 0.00 0.00 3.77
25 26 1.079405 TCTCGATTCGTGCCAACCC 60.079 57.895 5.89 0.00 0.00 4.11
26 27 1.375396 CTCGATTCGTGCCAACCCA 60.375 57.895 5.89 0.00 0.00 4.51
27 28 0.953471 CTCGATTCGTGCCAACCCAA 60.953 55.000 5.89 0.00 0.00 4.12
28 29 1.209127 CGATTCGTGCCAACCCAAC 59.791 57.895 0.00 0.00 0.00 3.77
29 30 1.511318 CGATTCGTGCCAACCCAACA 61.511 55.000 0.00 0.00 0.00 3.33
30 31 0.240945 GATTCGTGCCAACCCAACAG 59.759 55.000 0.00 0.00 0.00 3.16
31 32 0.179004 ATTCGTGCCAACCCAACAGA 60.179 50.000 0.00 0.00 0.00 3.41
32 33 1.098712 TTCGTGCCAACCCAACAGAC 61.099 55.000 0.00 0.00 0.00 3.51
33 34 1.821759 CGTGCCAACCCAACAGACA 60.822 57.895 0.00 0.00 0.00 3.41
34 35 1.733526 GTGCCAACCCAACAGACAC 59.266 57.895 0.00 0.00 0.00 3.67
35 36 0.751643 GTGCCAACCCAACAGACACT 60.752 55.000 0.00 0.00 0.00 3.55
36 37 0.033601 TGCCAACCCAACAGACACTT 60.034 50.000 0.00 0.00 0.00 3.16
37 38 1.111277 GCCAACCCAACAGACACTTT 58.889 50.000 0.00 0.00 0.00 2.66
38 39 1.067060 GCCAACCCAACAGACACTTTC 59.933 52.381 0.00 0.00 0.00 2.62
39 40 1.333619 CCAACCCAACAGACACTTTCG 59.666 52.381 0.00 0.00 0.00 3.46
40 41 1.333619 CAACCCAACAGACACTTTCGG 59.666 52.381 0.00 0.00 0.00 4.30
41 42 0.834612 ACCCAACAGACACTTTCGGA 59.165 50.000 0.00 0.00 0.00 4.55
42 43 1.420138 ACCCAACAGACACTTTCGGAT 59.580 47.619 0.00 0.00 0.00 4.18
43 44 2.635915 ACCCAACAGACACTTTCGGATA 59.364 45.455 0.00 0.00 0.00 2.59
44 45 3.000727 CCCAACAGACACTTTCGGATAC 58.999 50.000 0.00 0.00 0.00 2.24
45 46 3.000727 CCAACAGACACTTTCGGATACC 58.999 50.000 0.00 0.00 0.00 2.73
46 47 3.306780 CCAACAGACACTTTCGGATACCT 60.307 47.826 0.00 0.00 0.00 3.08
47 48 4.081862 CCAACAGACACTTTCGGATACCTA 60.082 45.833 0.00 0.00 0.00 3.08
48 49 5.395324 CCAACAGACACTTTCGGATACCTAT 60.395 44.000 0.00 0.00 0.00 2.57
49 50 6.183360 CCAACAGACACTTTCGGATACCTATA 60.183 42.308 0.00 0.00 0.00 1.31
50 51 6.636562 ACAGACACTTTCGGATACCTATAG 57.363 41.667 0.00 0.00 0.00 1.31
51 52 6.127793 ACAGACACTTTCGGATACCTATAGT 58.872 40.000 0.00 0.00 0.00 2.12
52 53 6.039493 ACAGACACTTTCGGATACCTATAGTG 59.961 42.308 9.80 9.80 37.95 2.74
53 54 5.009811 AGACACTTTCGGATACCTATAGTGC 59.990 44.000 10.78 6.25 36.00 4.40
54 55 4.647853 ACACTTTCGGATACCTATAGTGCA 59.352 41.667 10.78 0.00 36.00 4.57
55 56 4.982916 CACTTTCGGATACCTATAGTGCAC 59.017 45.833 9.40 9.40 0.00 4.57
56 57 4.038883 ACTTTCGGATACCTATAGTGCACC 59.961 45.833 14.63 0.00 0.00 5.01
57 58 3.520691 TCGGATACCTATAGTGCACCT 57.479 47.619 14.63 3.73 0.00 4.00
58 59 3.840991 TCGGATACCTATAGTGCACCTT 58.159 45.455 14.63 3.52 0.00 3.50
59 60 4.220724 TCGGATACCTATAGTGCACCTTT 58.779 43.478 14.63 0.65 0.00 3.11
60 61 5.387788 TCGGATACCTATAGTGCACCTTTA 58.612 41.667 14.63 0.00 0.00 1.85
61 62 6.014647 TCGGATACCTATAGTGCACCTTTAT 58.985 40.000 14.63 7.77 0.00 1.40
62 63 7.177184 TCGGATACCTATAGTGCACCTTTATA 58.823 38.462 14.63 8.55 0.00 0.98
63 64 7.338703 TCGGATACCTATAGTGCACCTTTATAG 59.661 40.741 14.63 16.99 0.00 1.31
64 65 7.122353 CGGATACCTATAGTGCACCTTTATAGT 59.878 40.741 21.22 15.02 0.00 2.12
65 66 8.468399 GGATACCTATAGTGCACCTTTATAGTC 58.532 40.741 21.22 15.32 0.00 2.59
66 67 8.951614 ATACCTATAGTGCACCTTTATAGTCA 57.048 34.615 21.22 13.37 0.00 3.41
67 68 7.052142 ACCTATAGTGCACCTTTATAGTCAC 57.948 40.000 21.22 0.00 0.00 3.67
68 69 6.041751 ACCTATAGTGCACCTTTATAGTCACC 59.958 42.308 21.22 0.00 0.00 4.02
69 70 3.629142 AGTGCACCTTTATAGTCACCC 57.371 47.619 14.63 0.00 0.00 4.61
70 71 2.910319 AGTGCACCTTTATAGTCACCCA 59.090 45.455 14.63 0.00 0.00 4.51
71 72 3.055094 AGTGCACCTTTATAGTCACCCAG 60.055 47.826 14.63 0.00 0.00 4.45
72 73 2.910319 TGCACCTTTATAGTCACCCAGT 59.090 45.455 0.00 0.00 0.00 4.00
73 74 3.329520 TGCACCTTTATAGTCACCCAGTT 59.670 43.478 0.00 0.00 0.00 3.16
74 75 4.532916 TGCACCTTTATAGTCACCCAGTTA 59.467 41.667 0.00 0.00 0.00 2.24
75 76 4.874396 GCACCTTTATAGTCACCCAGTTAC 59.126 45.833 0.00 0.00 0.00 2.50
76 77 5.107133 CACCTTTATAGTCACCCAGTTACG 58.893 45.833 0.00 0.00 0.00 3.18
77 78 4.774200 ACCTTTATAGTCACCCAGTTACGT 59.226 41.667 0.00 0.00 0.00 3.57
78 79 5.246883 ACCTTTATAGTCACCCAGTTACGTT 59.753 40.000 0.00 0.00 0.00 3.99
79 80 6.168389 CCTTTATAGTCACCCAGTTACGTTT 58.832 40.000 0.00 0.00 0.00 3.60
80 81 6.652062 CCTTTATAGTCACCCAGTTACGTTTT 59.348 38.462 0.00 0.00 0.00 2.43
81 82 7.360607 CCTTTATAGTCACCCAGTTACGTTTTG 60.361 40.741 0.00 0.00 0.00 2.44
82 83 3.547054 AGTCACCCAGTTACGTTTTGA 57.453 42.857 0.00 0.00 0.00 2.69
83 84 3.200483 AGTCACCCAGTTACGTTTTGAC 58.800 45.455 0.00 0.00 33.57 3.18
84 85 2.033492 GTCACCCAGTTACGTTTTGACG 60.033 50.000 0.00 0.00 39.31 4.35
86 87 2.352342 CACCCAGTTACGTTTTGACGTT 59.648 45.455 9.98 0.00 44.63 3.99
87 88 3.009026 ACCCAGTTACGTTTTGACGTTT 58.991 40.909 9.98 0.00 44.63 3.60
88 89 3.181508 ACCCAGTTACGTTTTGACGTTTG 60.182 43.478 9.98 6.86 44.63 2.93
89 90 3.181508 CCCAGTTACGTTTTGACGTTTGT 60.182 43.478 9.98 0.00 44.63 2.83
90 91 4.405196 CCAGTTACGTTTTGACGTTTGTT 58.595 39.130 9.98 0.00 44.63 2.83
91 92 5.447010 CCCAGTTACGTTTTGACGTTTGTTA 60.447 40.000 9.98 0.00 44.63 2.41
92 93 5.448796 CCAGTTACGTTTTGACGTTTGTTAC 59.551 40.000 9.98 2.47 44.63 2.50
93 94 6.014293 CAGTTACGTTTTGACGTTTGTTACA 58.986 36.000 9.98 0.00 44.63 2.41
94 95 6.014898 AGTTACGTTTTGACGTTTGTTACAC 58.985 36.000 9.98 0.00 44.63 2.90
95 96 3.746089 ACGTTTTGACGTTTGTTACACC 58.254 40.909 0.00 0.00 44.63 4.16
96 97 3.100089 CGTTTTGACGTTTGTTACACCC 58.900 45.455 0.00 0.00 0.00 4.61
97 98 3.425892 CGTTTTGACGTTTGTTACACCCA 60.426 43.478 0.00 0.00 0.00 4.51
98 99 4.483311 GTTTTGACGTTTGTTACACCCAA 58.517 39.130 0.00 0.00 0.00 4.12
99 100 4.778534 TTTGACGTTTGTTACACCCAAA 57.221 36.364 0.00 0.00 0.00 3.28
100 101 4.358494 TTGACGTTTGTTACACCCAAAG 57.642 40.909 0.00 0.00 32.79 2.77
101 102 2.097791 TGACGTTTGTTACACCCAAAGC 59.902 45.455 0.00 0.00 32.79 3.51
102 103 2.093106 ACGTTTGTTACACCCAAAGCA 58.907 42.857 0.00 0.00 32.79 3.91
103 104 2.159352 ACGTTTGTTACACCCAAAGCAC 60.159 45.455 0.00 0.00 32.79 4.40
104 105 2.098443 CGTTTGTTACACCCAAAGCACT 59.902 45.455 0.00 0.00 32.79 4.40
105 106 3.702330 GTTTGTTACACCCAAAGCACTC 58.298 45.455 0.00 0.00 32.79 3.51
106 107 1.975660 TGTTACACCCAAAGCACTCC 58.024 50.000 0.00 0.00 0.00 3.85
107 108 1.493022 TGTTACACCCAAAGCACTCCT 59.507 47.619 0.00 0.00 0.00 3.69
108 109 2.706723 TGTTACACCCAAAGCACTCCTA 59.293 45.455 0.00 0.00 0.00 2.94
109 110 3.072211 GTTACACCCAAAGCACTCCTAC 58.928 50.000 0.00 0.00 0.00 3.18
110 111 0.034896 ACACCCAAAGCACTCCTACG 59.965 55.000 0.00 0.00 0.00 3.51
111 112 0.673644 CACCCAAAGCACTCCTACGG 60.674 60.000 0.00 0.00 0.00 4.02
112 113 1.125711 ACCCAAAGCACTCCTACGGT 61.126 55.000 0.00 0.00 0.00 4.83
113 114 0.899720 CCCAAAGCACTCCTACGGTA 59.100 55.000 0.00 0.00 0.00 4.02
114 115 1.485066 CCCAAAGCACTCCTACGGTAT 59.515 52.381 0.00 0.00 0.00 2.73
115 116 2.483188 CCCAAAGCACTCCTACGGTATC 60.483 54.545 0.00 0.00 0.00 2.24
116 117 2.483188 CCAAAGCACTCCTACGGTATCC 60.483 54.545 0.00 0.00 0.00 2.59
127 128 3.953201 CGGTATCCGGGAGTTACAC 57.047 57.895 0.00 0.00 44.15 2.90
128 129 1.105457 CGGTATCCGGGAGTTACACA 58.895 55.000 0.00 0.00 44.15 3.72
129 130 1.477700 CGGTATCCGGGAGTTACACAA 59.522 52.381 0.00 0.00 44.15 3.33
130 131 2.101917 CGGTATCCGGGAGTTACACAAT 59.898 50.000 0.00 0.00 44.15 2.71
131 132 3.725490 GGTATCCGGGAGTTACACAATC 58.275 50.000 0.00 0.00 0.00 2.67
132 133 3.387050 GGTATCCGGGAGTTACACAATCT 59.613 47.826 0.00 0.00 0.00 2.40
133 134 3.821421 ATCCGGGAGTTACACAATCTC 57.179 47.619 0.00 0.00 0.00 2.75
134 135 2.531771 TCCGGGAGTTACACAATCTCA 58.468 47.619 0.00 0.00 0.00 3.27
135 136 3.104512 TCCGGGAGTTACACAATCTCAT 58.895 45.455 0.00 0.00 0.00 2.90
136 137 3.118775 TCCGGGAGTTACACAATCTCATG 60.119 47.826 0.00 0.00 0.00 3.07
137 138 3.198068 CGGGAGTTACACAATCTCATGG 58.802 50.000 0.00 0.00 0.00 3.66
138 139 3.369471 CGGGAGTTACACAATCTCATGGT 60.369 47.826 0.00 0.00 0.00 3.55
139 140 4.192317 GGGAGTTACACAATCTCATGGTC 58.808 47.826 0.00 0.00 0.00 4.02
140 141 4.080863 GGGAGTTACACAATCTCATGGTCT 60.081 45.833 0.00 0.00 0.00 3.85
141 142 5.128827 GGGAGTTACACAATCTCATGGTCTA 59.871 44.000 0.00 0.00 0.00 2.59
142 143 6.351881 GGGAGTTACACAATCTCATGGTCTAA 60.352 42.308 0.00 0.00 0.00 2.10
143 144 6.758886 GGAGTTACACAATCTCATGGTCTAAG 59.241 42.308 0.00 0.00 0.00 2.18
144 145 6.644347 AGTTACACAATCTCATGGTCTAAGG 58.356 40.000 0.00 0.00 0.00 2.69
145 146 6.440647 AGTTACACAATCTCATGGTCTAAGGA 59.559 38.462 0.00 0.00 0.00 3.36
146 147 5.762179 ACACAATCTCATGGTCTAAGGAA 57.238 39.130 0.00 0.00 0.00 3.36
147 148 6.126863 ACACAATCTCATGGTCTAAGGAAA 57.873 37.500 0.00 0.00 0.00 3.13
148 149 6.725364 ACACAATCTCATGGTCTAAGGAAAT 58.275 36.000 0.00 0.00 0.00 2.17
149 150 6.600822 ACACAATCTCATGGTCTAAGGAAATG 59.399 38.462 0.00 0.00 0.00 2.32
150 151 6.825213 CACAATCTCATGGTCTAAGGAAATGA 59.175 38.462 0.00 0.00 0.00 2.57
151 152 7.501559 CACAATCTCATGGTCTAAGGAAATGAT 59.498 37.037 0.00 0.00 31.04 2.45
152 153 8.717717 ACAATCTCATGGTCTAAGGAAATGATA 58.282 33.333 0.00 0.00 31.04 2.15
153 154 8.997323 CAATCTCATGGTCTAAGGAAATGATAC 58.003 37.037 0.00 0.00 31.04 2.24
154 155 7.921041 TCTCATGGTCTAAGGAAATGATACT 57.079 36.000 0.00 0.00 31.04 2.12
155 156 8.324191 TCTCATGGTCTAAGGAAATGATACTT 57.676 34.615 0.00 0.00 31.04 2.24
156 157 8.206867 TCTCATGGTCTAAGGAAATGATACTTG 58.793 37.037 0.00 0.00 31.04 3.16
157 158 8.089625 TCATGGTCTAAGGAAATGATACTTGA 57.910 34.615 0.00 0.00 0.00 3.02
158 159 7.987458 TCATGGTCTAAGGAAATGATACTTGAC 59.013 37.037 0.00 0.00 0.00 3.18
159 160 7.252612 TGGTCTAAGGAAATGATACTTGACA 57.747 36.000 0.00 0.00 30.76 3.58
160 161 7.861629 TGGTCTAAGGAAATGATACTTGACAT 58.138 34.615 0.00 0.00 30.76 3.06
161 162 8.328758 TGGTCTAAGGAAATGATACTTGACATT 58.671 33.333 0.00 0.00 38.18 2.71
162 163 9.832445 GGTCTAAGGAAATGATACTTGACATTA 57.168 33.333 0.00 0.00 35.99 1.90
169 170 9.508567 GGAAATGATACTTGACATTAGAAAAGC 57.491 33.333 0.00 0.00 35.99 3.51
175 176 9.709600 GATACTTGACATTAGAAAAGCTTTAGC 57.290 33.333 13.10 7.97 42.49 3.09
176 177 7.510549 ACTTGACATTAGAAAAGCTTTAGCA 57.489 32.000 13.10 0.00 45.16 3.49
177 178 7.940850 ACTTGACATTAGAAAAGCTTTAGCAA 58.059 30.769 13.10 6.91 45.16 3.91
178 179 8.413229 ACTTGACATTAGAAAAGCTTTAGCAAA 58.587 29.630 13.10 5.47 45.16 3.68
179 180 8.574196 TTGACATTAGAAAAGCTTTAGCAAAC 57.426 30.769 13.10 1.75 45.16 2.93
180 181 6.855914 TGACATTAGAAAAGCTTTAGCAAACG 59.144 34.615 13.10 1.72 45.16 3.60
181 182 6.966021 ACATTAGAAAAGCTTTAGCAAACGA 58.034 32.000 13.10 0.00 45.16 3.85
182 183 7.422399 ACATTAGAAAAGCTTTAGCAAACGAA 58.578 30.769 13.10 3.87 45.16 3.85
183 184 7.378728 ACATTAGAAAAGCTTTAGCAAACGAAC 59.621 33.333 13.10 0.00 45.16 3.95
184 185 5.500645 AGAAAAGCTTTAGCAAACGAACT 57.499 34.783 13.10 0.00 45.16 3.01
185 186 6.613755 AGAAAAGCTTTAGCAAACGAACTA 57.386 33.333 13.10 0.00 45.16 2.24
186 187 6.427974 AGAAAAGCTTTAGCAAACGAACTAC 58.572 36.000 13.10 0.00 45.16 2.73
187 188 5.744666 AAAGCTTTAGCAAACGAACTACA 57.255 34.783 10.72 0.00 45.16 2.74
188 189 4.727235 AGCTTTAGCAAACGAACTACAC 57.273 40.909 4.33 0.00 45.16 2.90
189 190 3.183775 AGCTTTAGCAAACGAACTACACG 59.816 43.478 4.33 0.00 45.16 4.49
190 191 3.182972 GCTTTAGCAAACGAACTACACGA 59.817 43.478 0.00 0.00 41.59 4.35
191 192 4.143179 GCTTTAGCAAACGAACTACACGAT 60.143 41.667 0.00 0.00 41.59 3.73
192 193 5.505165 TTTAGCAAACGAACTACACGATC 57.495 39.130 0.00 0.00 34.70 3.69
193 194 3.299340 AGCAAACGAACTACACGATCT 57.701 42.857 0.00 0.00 34.70 2.75
194 195 3.650139 AGCAAACGAACTACACGATCTT 58.350 40.909 0.00 0.00 34.70 2.40
195 196 3.428870 AGCAAACGAACTACACGATCTTG 59.571 43.478 0.00 0.00 34.70 3.02
196 197 3.183775 GCAAACGAACTACACGATCTTGT 59.816 43.478 10.01 10.01 34.70 3.16
197 198 4.688063 CAAACGAACTACACGATCTTGTG 58.312 43.478 14.69 7.12 45.41 3.33
208 209 5.395325 CACGATCTTGTGTTATGCTTAGG 57.605 43.478 0.00 0.00 35.12 2.69
209 210 5.109210 CACGATCTTGTGTTATGCTTAGGA 58.891 41.667 0.00 0.00 35.12 2.94
210 211 5.755375 CACGATCTTGTGTTATGCTTAGGAT 59.245 40.000 0.00 0.00 35.12 3.24
211 212 6.258727 CACGATCTTGTGTTATGCTTAGGATT 59.741 38.462 0.00 0.00 35.12 3.01
212 213 6.258727 ACGATCTTGTGTTATGCTTAGGATTG 59.741 38.462 0.00 0.00 0.00 2.67
213 214 6.293081 CGATCTTGTGTTATGCTTAGGATTGG 60.293 42.308 0.00 0.00 0.00 3.16
214 215 5.192927 TCTTGTGTTATGCTTAGGATTGGG 58.807 41.667 0.00 0.00 0.00 4.12
215 216 4.584638 TGTGTTATGCTTAGGATTGGGT 57.415 40.909 0.00 0.00 0.00 4.51
216 217 4.523083 TGTGTTATGCTTAGGATTGGGTC 58.477 43.478 0.00 0.00 0.00 4.46
217 218 4.227300 TGTGTTATGCTTAGGATTGGGTCT 59.773 41.667 0.00 0.00 0.00 3.85
218 219 5.193679 GTGTTATGCTTAGGATTGGGTCTT 58.806 41.667 0.00 0.00 0.00 3.01
219 220 5.066505 GTGTTATGCTTAGGATTGGGTCTTG 59.933 44.000 0.00 0.00 0.00 3.02
220 221 5.193679 GTTATGCTTAGGATTGGGTCTTGT 58.806 41.667 0.00 0.00 0.00 3.16
221 222 3.350219 TGCTTAGGATTGGGTCTTGTC 57.650 47.619 0.00 0.00 0.00 3.18
222 223 2.026262 TGCTTAGGATTGGGTCTTGTCC 60.026 50.000 0.00 0.00 0.00 4.02
223 224 2.026262 GCTTAGGATTGGGTCTTGTCCA 60.026 50.000 0.00 0.00 33.12 4.02
224 225 3.372025 GCTTAGGATTGGGTCTTGTCCAT 60.372 47.826 0.00 0.00 33.82 3.41
225 226 4.455606 CTTAGGATTGGGTCTTGTCCATC 58.544 47.826 0.00 0.00 33.82 3.51
226 227 2.278245 AGGATTGGGTCTTGTCCATCA 58.722 47.619 0.00 0.00 33.82 3.07
227 228 2.025887 AGGATTGGGTCTTGTCCATCAC 60.026 50.000 0.00 0.00 33.82 3.06
228 229 2.290896 GGATTGGGTCTTGTCCATCACA 60.291 50.000 0.00 0.00 33.82 3.58
229 230 3.624777 GATTGGGTCTTGTCCATCACAT 58.375 45.455 0.00 0.00 33.90 3.21
230 231 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
231 232 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
232 233 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
233 234 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
234 235 3.629398 GGGTCTTGTCCATCACATCATTC 59.371 47.826 0.00 0.00 33.90 2.67
235 236 4.521146 GGTCTTGTCCATCACATCATTCT 58.479 43.478 0.00 0.00 33.90 2.40
236 237 4.574013 GGTCTTGTCCATCACATCATTCTC 59.426 45.833 0.00 0.00 33.90 2.87
237 238 4.574013 GTCTTGTCCATCACATCATTCTCC 59.426 45.833 0.00 0.00 33.90 3.71
238 239 4.472470 TCTTGTCCATCACATCATTCTCCT 59.528 41.667 0.00 0.00 33.90 3.69
239 240 5.662657 TCTTGTCCATCACATCATTCTCCTA 59.337 40.000 0.00 0.00 33.90 2.94
240 241 5.955961 TGTCCATCACATCATTCTCCTAA 57.044 39.130 0.00 0.00 0.00 2.69
241 242 6.505048 TGTCCATCACATCATTCTCCTAAT 57.495 37.500 0.00 0.00 0.00 1.73
242 243 6.293698 TGTCCATCACATCATTCTCCTAATG 58.706 40.000 0.00 0.00 0.00 1.90
243 244 6.100134 TGTCCATCACATCATTCTCCTAATGA 59.900 38.462 3.13 3.13 40.50 2.57
244 245 7.166851 GTCCATCACATCATTCTCCTAATGAT 58.833 38.462 7.28 7.28 45.40 2.45
253 254 8.850007 ATCATTCTCCTAATGATGTGATCTTG 57.150 34.615 11.39 0.00 43.52 3.02
254 255 7.799081 TCATTCTCCTAATGATGTGATCTTGT 58.201 34.615 0.00 0.00 32.21 3.16
255 256 8.270030 TCATTCTCCTAATGATGTGATCTTGTT 58.730 33.333 0.00 0.00 32.21 2.83
256 257 9.551734 CATTCTCCTAATGATGTGATCTTGTTA 57.448 33.333 0.00 0.00 0.00 2.41
258 259 9.770097 TTCTCCTAATGATGTGATCTTGTTATC 57.230 33.333 0.00 0.00 0.00 1.75
259 260 8.927411 TCTCCTAATGATGTGATCTTGTTATCA 58.073 33.333 0.00 0.00 33.48 2.15
260 261 9.551734 CTCCTAATGATGTGATCTTGTTATCAA 57.448 33.333 0.00 0.00 37.61 2.57
277 278 8.765488 TGTTATCAATAACATCCAATGTCCAT 57.235 30.769 10.74 0.00 45.41 3.41
278 279 9.859152 TGTTATCAATAACATCCAATGTCCATA 57.141 29.630 10.74 0.00 45.41 2.74
283 284 9.559732 TCAATAACATCCAATGTCCATAGTTAG 57.440 33.333 0.00 0.00 44.07 2.34
284 285 8.786898 CAATAACATCCAATGTCCATAGTTAGG 58.213 37.037 0.00 0.00 44.07 2.69
285 286 6.575244 AACATCCAATGTCCATAGTTAGGA 57.425 37.500 0.00 0.00 44.07 2.94
286 287 6.575244 ACATCCAATGTCCATAGTTAGGAA 57.425 37.500 0.00 0.00 39.92 3.36
287 288 6.969043 ACATCCAATGTCCATAGTTAGGAAA 58.031 36.000 0.00 0.00 39.92 3.13
288 289 6.828785 ACATCCAATGTCCATAGTTAGGAAAC 59.171 38.462 0.00 0.00 39.92 2.78
289 290 5.751586 TCCAATGTCCATAGTTAGGAAACC 58.248 41.667 0.00 0.00 36.80 3.27
290 291 5.251932 TCCAATGTCCATAGTTAGGAAACCA 59.748 40.000 0.00 0.00 36.80 3.67
291 292 6.069088 TCCAATGTCCATAGTTAGGAAACCAT 60.069 38.462 0.00 0.00 36.80 3.55
292 293 6.039717 CCAATGTCCATAGTTAGGAAACCATG 59.960 42.308 0.00 0.00 36.80 3.66
293 294 6.575244 ATGTCCATAGTTAGGAAACCATGA 57.425 37.500 0.00 0.00 37.01 3.07
294 295 5.741011 TGTCCATAGTTAGGAAACCATGAC 58.259 41.667 0.00 0.00 37.01 3.06
295 296 5.123936 GTCCATAGTTAGGAAACCATGACC 58.876 45.833 0.00 0.00 37.01 4.02
296 297 4.785914 TCCATAGTTAGGAAACCATGACCA 59.214 41.667 0.00 0.00 37.01 4.02
297 298 5.431731 TCCATAGTTAGGAAACCATGACCAT 59.568 40.000 0.00 0.00 37.01 3.55
298 299 5.765182 CCATAGTTAGGAAACCATGACCATC 59.235 44.000 0.00 0.00 37.01 3.51
299 300 6.409695 CCATAGTTAGGAAACCATGACCATCT 60.410 42.308 0.00 0.00 37.01 2.90
300 301 7.202093 CCATAGTTAGGAAACCATGACCATCTA 60.202 40.741 0.00 0.00 37.01 1.98
301 302 6.831664 AGTTAGGAAACCATGACCATCTAT 57.168 37.500 0.00 0.00 36.15 1.98
302 303 7.213178 AGTTAGGAAACCATGACCATCTATT 57.787 36.000 0.00 0.00 36.15 1.73
303 304 7.056635 AGTTAGGAAACCATGACCATCTATTG 58.943 38.462 0.00 0.00 36.15 1.90
304 305 5.715439 AGGAAACCATGACCATCTATTGA 57.285 39.130 0.00 0.00 0.00 2.57
305 306 6.271585 AGGAAACCATGACCATCTATTGAT 57.728 37.500 0.00 0.00 0.00 2.57
306 307 6.302269 AGGAAACCATGACCATCTATTGATC 58.698 40.000 0.00 0.00 0.00 2.92
307 308 6.064060 GGAAACCATGACCATCTATTGATCA 58.936 40.000 0.00 0.00 0.00 2.92
308 309 6.547141 GGAAACCATGACCATCTATTGATCAA 59.453 38.462 11.26 11.26 0.00 2.57
309 310 6.949352 AACCATGACCATCTATTGATCAAC 57.051 37.500 11.07 0.00 0.00 3.18
310 311 5.059161 ACCATGACCATCTATTGATCAACG 58.941 41.667 11.07 5.26 0.00 4.10
311 312 5.163311 ACCATGACCATCTATTGATCAACGA 60.163 40.000 11.07 10.80 0.00 3.85
312 313 5.407691 CCATGACCATCTATTGATCAACGAG 59.592 44.000 11.07 11.28 0.00 4.18
313 314 4.371786 TGACCATCTATTGATCAACGAGC 58.628 43.478 11.07 3.26 0.00 5.03
314 315 4.100035 TGACCATCTATTGATCAACGAGCT 59.900 41.667 11.07 0.00 0.00 4.09
315 316 5.301805 TGACCATCTATTGATCAACGAGCTA 59.698 40.000 11.07 0.00 0.00 3.32
316 317 5.777802 ACCATCTATTGATCAACGAGCTAG 58.222 41.667 11.07 8.38 0.00 3.42
317 318 5.303078 ACCATCTATTGATCAACGAGCTAGT 59.697 40.000 11.07 6.23 0.00 2.57
318 319 5.861251 CCATCTATTGATCAACGAGCTAGTC 59.139 44.000 11.07 0.00 0.00 2.59
319 320 6.442112 CATCTATTGATCAACGAGCTAGTCA 58.558 40.000 11.07 0.00 0.00 3.41
320 321 6.451064 TCTATTGATCAACGAGCTAGTCAA 57.549 37.500 11.07 0.55 0.00 3.18
321 322 6.266323 TCTATTGATCAACGAGCTAGTCAAC 58.734 40.000 11.07 0.00 0.00 3.18
322 323 4.521130 TTGATCAACGAGCTAGTCAACT 57.479 40.909 3.38 0.00 0.00 3.16
323 324 5.638596 TTGATCAACGAGCTAGTCAACTA 57.361 39.130 3.38 0.00 0.00 2.24
324 325 5.236655 TGATCAACGAGCTAGTCAACTAG 57.763 43.478 11.99 11.99 46.63 2.57
325 326 4.941873 TGATCAACGAGCTAGTCAACTAGA 59.058 41.667 19.03 0.00 46.80 2.43
326 327 4.948608 TCAACGAGCTAGTCAACTAGAG 57.051 45.455 19.03 11.89 46.80 2.43
327 328 3.690139 TCAACGAGCTAGTCAACTAGAGG 59.310 47.826 19.03 10.05 46.80 3.69
328 329 2.018515 ACGAGCTAGTCAACTAGAGGC 58.981 52.381 19.03 6.58 46.80 4.70
329 330 2.294074 CGAGCTAGTCAACTAGAGGCT 58.706 52.381 19.03 10.84 46.80 4.58
330 331 2.289547 CGAGCTAGTCAACTAGAGGCTC 59.710 54.545 19.03 16.73 46.80 4.70
331 332 3.283751 GAGCTAGTCAACTAGAGGCTCA 58.716 50.000 18.26 1.80 46.80 4.26
332 333 3.020984 AGCTAGTCAACTAGAGGCTCAC 58.979 50.000 18.26 4.72 46.80 3.51
333 334 3.020984 GCTAGTCAACTAGAGGCTCACT 58.979 50.000 18.26 12.32 46.80 3.41
334 335 4.080243 AGCTAGTCAACTAGAGGCTCACTA 60.080 45.833 18.26 12.80 46.80 2.74
335 336 4.274950 GCTAGTCAACTAGAGGCTCACTAG 59.725 50.000 23.14 23.14 46.80 2.57
336 337 3.626930 AGTCAACTAGAGGCTCACTAGG 58.373 50.000 18.26 3.24 40.86 3.02
337 338 2.691011 GTCAACTAGAGGCTCACTAGGG 59.309 54.545 18.26 7.64 40.86 3.53
338 339 2.581246 TCAACTAGAGGCTCACTAGGGA 59.419 50.000 18.26 9.66 40.86 4.20
339 340 2.691011 CAACTAGAGGCTCACTAGGGAC 59.309 54.545 18.26 0.00 40.86 4.46
340 341 1.923850 ACTAGAGGCTCACTAGGGACA 59.076 52.381 18.26 0.00 40.86 4.02
341 342 2.516277 ACTAGAGGCTCACTAGGGACAT 59.484 50.000 18.26 0.00 40.86 3.06
342 343 1.786937 AGAGGCTCACTAGGGACATG 58.213 55.000 18.26 0.00 0.00 3.21
343 344 1.007721 AGAGGCTCACTAGGGACATGT 59.992 52.381 18.26 0.00 0.00 3.21
344 345 1.834263 GAGGCTCACTAGGGACATGTT 59.166 52.381 10.25 0.00 0.00 2.71
345 346 1.556911 AGGCTCACTAGGGACATGTTG 59.443 52.381 0.00 0.00 0.00 3.33
346 347 1.279271 GGCTCACTAGGGACATGTTGT 59.721 52.381 0.00 0.00 0.00 3.32
347 348 2.350522 GCTCACTAGGGACATGTTGTG 58.649 52.381 0.00 5.31 0.00 3.33
348 349 2.936993 GCTCACTAGGGACATGTTGTGG 60.937 54.545 0.00 0.00 0.00 4.17
349 350 2.303022 CTCACTAGGGACATGTTGTGGT 59.697 50.000 0.00 0.00 0.00 4.16
350 351 2.301870 TCACTAGGGACATGTTGTGGTC 59.698 50.000 0.00 0.00 0.00 4.02
351 352 2.303022 CACTAGGGACATGTTGTGGTCT 59.697 50.000 0.00 0.00 34.49 3.85
352 353 3.513912 CACTAGGGACATGTTGTGGTCTA 59.486 47.826 0.00 0.00 34.49 2.59
353 354 4.162320 CACTAGGGACATGTTGTGGTCTAT 59.838 45.833 0.00 0.00 34.49 1.98
354 355 3.634397 AGGGACATGTTGTGGTCTATG 57.366 47.619 0.00 0.00 34.49 2.23
355 356 2.912956 AGGGACATGTTGTGGTCTATGT 59.087 45.455 0.00 0.00 36.54 2.29
356 357 4.101114 AGGGACATGTTGTGGTCTATGTA 58.899 43.478 0.00 0.00 34.18 2.29
357 358 4.721776 AGGGACATGTTGTGGTCTATGTAT 59.278 41.667 0.00 0.00 34.18 2.29
358 359 5.191722 AGGGACATGTTGTGGTCTATGTATT 59.808 40.000 0.00 0.00 34.18 1.89
359 360 5.527582 GGGACATGTTGTGGTCTATGTATTC 59.472 44.000 0.00 0.00 34.18 1.75
360 361 6.112734 GGACATGTTGTGGTCTATGTATTCA 58.887 40.000 0.00 0.00 34.18 2.57
361 362 6.037172 GGACATGTTGTGGTCTATGTATTCAC 59.963 42.308 0.00 0.00 34.18 3.18
362 363 6.472016 ACATGTTGTGGTCTATGTATTCACA 58.528 36.000 0.00 0.00 39.52 3.58
363 364 6.371548 ACATGTTGTGGTCTATGTATTCACAC 59.628 38.462 0.00 0.00 37.96 3.82
364 365 5.859495 TGTTGTGGTCTATGTATTCACACA 58.141 37.500 0.00 0.00 37.96 3.72
365 366 6.472016 TGTTGTGGTCTATGTATTCACACAT 58.528 36.000 0.00 0.00 41.88 3.21
366 367 6.371271 TGTTGTGGTCTATGTATTCACACATG 59.629 38.462 0.00 0.00 39.46 3.21
367 368 6.048732 TGTGGTCTATGTATTCACACATGT 57.951 37.500 0.00 0.00 39.46 3.21
368 369 7.176589 TGTGGTCTATGTATTCACACATGTA 57.823 36.000 0.00 0.00 39.46 2.29
369 370 7.791029 TGTGGTCTATGTATTCACACATGTAT 58.209 34.615 0.00 0.00 39.46 2.29
370 371 8.264347 TGTGGTCTATGTATTCACACATGTATT 58.736 33.333 0.00 0.00 39.46 1.89
371 372 9.758651 GTGGTCTATGTATTCACACATGTATTA 57.241 33.333 0.00 0.00 39.46 0.98
372 373 9.758651 TGGTCTATGTATTCACACATGTATTAC 57.241 33.333 0.00 0.00 39.46 1.89
373 374 8.912658 GGTCTATGTATTCACACATGTATTACG 58.087 37.037 0.00 0.00 39.46 3.18
374 375 8.912658 GTCTATGTATTCACACATGTATTACGG 58.087 37.037 0.00 0.00 39.46 4.02
375 376 8.635328 TCTATGTATTCACACATGTATTACGGT 58.365 33.333 0.00 0.00 39.46 4.83
376 377 9.256477 CTATGTATTCACACATGTATTACGGTT 57.744 33.333 0.00 0.00 39.46 4.44
377 378 7.908827 TGTATTCACACATGTATTACGGTTT 57.091 32.000 0.00 0.00 0.00 3.27
378 379 7.966111 TGTATTCACACATGTATTACGGTTTC 58.034 34.615 0.00 0.00 0.00 2.78
379 380 5.866335 TTCACACATGTATTACGGTTTCC 57.134 39.130 0.00 0.00 0.00 3.13
394 395 4.900664 CGGTTTCCGGTCAATACAATTAC 58.099 43.478 0.00 0.00 44.15 1.89
395 396 4.392445 CGGTTTCCGGTCAATACAATTACA 59.608 41.667 0.00 0.00 44.15 2.41
396 397 5.065474 CGGTTTCCGGTCAATACAATTACAT 59.935 40.000 0.00 0.00 44.15 2.29
397 398 6.492254 GGTTTCCGGTCAATACAATTACATC 58.508 40.000 0.00 0.00 0.00 3.06
398 399 6.094325 GGTTTCCGGTCAATACAATTACATCA 59.906 38.462 0.00 0.00 0.00 3.07
399 400 7.201785 GGTTTCCGGTCAATACAATTACATCAT 60.202 37.037 0.00 0.00 0.00 2.45
400 401 6.859420 TCCGGTCAATACAATTACATCATG 57.141 37.500 0.00 0.00 0.00 3.07
401 402 6.587273 TCCGGTCAATACAATTACATCATGA 58.413 36.000 0.00 0.00 0.00 3.07
402 403 7.051000 TCCGGTCAATACAATTACATCATGAA 58.949 34.615 0.00 0.00 0.00 2.57
403 404 7.719193 TCCGGTCAATACAATTACATCATGAAT 59.281 33.333 0.00 0.00 0.00 2.57
404 405 8.998377 CCGGTCAATACAATTACATCATGAATA 58.002 33.333 0.00 0.00 0.00 1.75
430 431 9.599866 AGTAGACAATTATCATGAATGACGAAA 57.400 29.630 0.00 0.00 40.03 3.46
464 465 7.839680 AACCATTTTATTATTGCCTCTAGGG 57.160 36.000 0.00 0.00 35.18 3.53
477 478 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
478 479 4.392940 CCTCTAGGGCATATTTCCAACAG 58.607 47.826 0.00 0.00 0.00 3.16
479 480 4.141390 CCTCTAGGGCATATTTCCAACAGT 60.141 45.833 0.00 0.00 0.00 3.55
480 481 5.071788 CCTCTAGGGCATATTTCCAACAGTA 59.928 44.000 0.00 0.00 0.00 2.74
481 482 6.409234 CCTCTAGGGCATATTTCCAACAGTAA 60.409 42.308 0.00 0.00 0.00 2.24
482 483 7.149202 TCTAGGGCATATTTCCAACAGTAAT 57.851 36.000 0.00 0.00 0.00 1.89
483 484 7.224297 TCTAGGGCATATTTCCAACAGTAATC 58.776 38.462 0.00 0.00 0.00 1.75
484 485 5.765510 AGGGCATATTTCCAACAGTAATCA 58.234 37.500 0.00 0.00 0.00 2.57
485 486 6.194235 AGGGCATATTTCCAACAGTAATCAA 58.806 36.000 0.00 0.00 0.00 2.57
486 487 6.096846 AGGGCATATTTCCAACAGTAATCAAC 59.903 38.462 0.00 0.00 0.00 3.18
487 488 6.127479 GGGCATATTTCCAACAGTAATCAACA 60.127 38.462 0.00 0.00 0.00 3.33
488 489 7.319646 GGCATATTTCCAACAGTAATCAACAA 58.680 34.615 0.00 0.00 0.00 2.83
489 490 7.275560 GGCATATTTCCAACAGTAATCAACAAC 59.724 37.037 0.00 0.00 0.00 3.32
490 491 7.812191 GCATATTTCCAACAGTAATCAACAACA 59.188 33.333 0.00 0.00 0.00 3.33
491 492 9.859427 CATATTTCCAACAGTAATCAACAACAT 57.141 29.630 0.00 0.00 0.00 2.71
493 494 6.951062 TTCCAACAGTAATCAACAACATCA 57.049 33.333 0.00 0.00 0.00 3.07
494 495 7.523293 TTCCAACAGTAATCAACAACATCAT 57.477 32.000 0.00 0.00 0.00 2.45
495 496 7.144722 TCCAACAGTAATCAACAACATCATC 57.855 36.000 0.00 0.00 0.00 2.92
496 497 6.714356 TCCAACAGTAATCAACAACATCATCA 59.286 34.615 0.00 0.00 0.00 3.07
497 498 7.394077 TCCAACAGTAATCAACAACATCATCAT 59.606 33.333 0.00 0.00 0.00 2.45
498 499 7.486870 CCAACAGTAATCAACAACATCATCATG 59.513 37.037 0.00 0.00 35.92 3.07
499 500 7.092137 ACAGTAATCAACAACATCATCATGG 57.908 36.000 0.00 0.00 33.82 3.66
500 501 6.095860 ACAGTAATCAACAACATCATCATGGG 59.904 38.462 0.00 0.00 33.82 4.00
501 502 6.095860 CAGTAATCAACAACATCATCATGGGT 59.904 38.462 0.00 0.00 33.82 4.51
502 503 5.587388 AATCAACAACATCATCATGGGTC 57.413 39.130 0.00 0.00 33.82 4.46
503 504 4.305539 TCAACAACATCATCATGGGTCT 57.694 40.909 0.00 0.00 33.82 3.85
504 505 4.264253 TCAACAACATCATCATGGGTCTC 58.736 43.478 0.00 0.00 33.82 3.36
505 506 3.287867 ACAACATCATCATGGGTCTCC 57.712 47.619 0.00 0.00 33.82 3.71
506 507 2.216046 CAACATCATCATGGGTCTCCG 58.784 52.381 0.00 0.00 33.82 4.63
507 508 0.107456 ACATCATCATGGGTCTCCGC 59.893 55.000 0.00 0.00 33.82 5.54
508 509 0.395686 CATCATCATGGGTCTCCGCT 59.604 55.000 0.00 0.00 35.24 5.52
509 510 0.683973 ATCATCATGGGTCTCCGCTC 59.316 55.000 0.00 0.00 35.24 5.03
510 511 0.687427 TCATCATGGGTCTCCGCTCA 60.687 55.000 0.00 0.00 35.24 4.26
511 512 0.395686 CATCATGGGTCTCCGCTCAT 59.604 55.000 0.00 0.00 35.24 2.90
512 513 1.620323 CATCATGGGTCTCCGCTCATA 59.380 52.381 0.00 0.00 35.24 2.15
513 514 1.332195 TCATGGGTCTCCGCTCATAG 58.668 55.000 0.00 0.00 35.24 2.23
514 515 0.319728 CATGGGTCTCCGCTCATAGG 59.680 60.000 0.00 0.00 35.24 2.57
515 516 1.476007 ATGGGTCTCCGCTCATAGGC 61.476 60.000 0.00 0.00 35.24 3.93
516 517 1.834822 GGGTCTCCGCTCATAGGCT 60.835 63.158 0.00 0.00 0.00 4.58
517 518 1.365633 GGTCTCCGCTCATAGGCTG 59.634 63.158 0.00 0.00 0.00 4.85
518 519 1.300542 GTCTCCGCTCATAGGCTGC 60.301 63.158 0.00 0.00 0.00 5.25
519 520 1.758122 TCTCCGCTCATAGGCTGCA 60.758 57.895 0.50 0.00 0.00 4.41
520 521 1.300775 CTCCGCTCATAGGCTGCAG 60.301 63.158 10.11 10.11 0.00 4.41
521 522 2.971413 CCGCTCATAGGCTGCAGC 60.971 66.667 30.88 30.88 41.14 5.25
522 523 2.108566 CGCTCATAGGCTGCAGCT 59.891 61.111 35.82 23.99 41.70 4.24
523 524 1.955157 CGCTCATAGGCTGCAGCTC 60.955 63.158 35.82 25.61 41.70 4.09
524 525 1.446791 GCTCATAGGCTGCAGCTCT 59.553 57.895 35.82 30.26 41.70 4.09
525 526 0.678395 GCTCATAGGCTGCAGCTCTA 59.322 55.000 35.82 31.22 41.70 2.43
526 527 1.337074 GCTCATAGGCTGCAGCTCTAG 60.337 57.143 35.82 24.84 41.70 2.43
527 528 0.678395 TCATAGGCTGCAGCTCTAGC 59.322 55.000 35.82 20.17 41.70 3.42
537 538 3.713650 GCTCTAGCTCCACCACCA 58.286 61.111 0.00 0.00 38.21 4.17
538 539 1.219393 GCTCTAGCTCCACCACCAC 59.781 63.158 0.00 0.00 38.21 4.16
539 540 1.901085 CTCTAGCTCCACCACCACC 59.099 63.158 0.00 0.00 0.00 4.61
540 541 1.949847 CTCTAGCTCCACCACCACCG 61.950 65.000 0.00 0.00 0.00 4.94
541 542 3.665675 CTAGCTCCACCACCACCGC 62.666 68.421 0.00 0.00 0.00 5.68
562 563 3.480133 CCCCTTCGGAGCCGGATT 61.480 66.667 5.05 0.00 40.25 3.01
563 564 2.138179 CCCCTTCGGAGCCGGATTA 61.138 63.158 5.05 0.00 40.25 1.75
564 565 1.367840 CCCTTCGGAGCCGGATTAG 59.632 63.158 5.05 0.00 40.25 1.73
565 566 1.301009 CCTTCGGAGCCGGATTAGC 60.301 63.158 5.05 0.00 40.25 3.09
566 567 1.742768 CTTCGGAGCCGGATTAGCT 59.257 57.895 5.05 0.00 45.23 3.32
567 568 0.105039 CTTCGGAGCCGGATTAGCTT 59.895 55.000 5.05 0.00 41.75 3.74
568 569 0.104304 TTCGGAGCCGGATTAGCTTC 59.896 55.000 5.05 0.00 41.75 3.86
569 570 0.755698 TCGGAGCCGGATTAGCTTCT 60.756 55.000 5.05 0.00 41.75 2.85
570 571 0.105039 CGGAGCCGGATTAGCTTCTT 59.895 55.000 5.05 0.00 41.75 2.52
773 774 0.037697 TATTCAGACCGTTGCACGCT 60.038 50.000 0.00 0.00 40.91 5.07
926 931 2.432300 GGCGGTGGGAAGCTAGCTA 61.432 63.158 19.70 0.00 0.00 3.32
954 959 3.712907 GGCGGTGGGAAGGTAGCA 61.713 66.667 0.00 0.00 0.00 3.49
1269 1328 2.479566 AGAGCATGACGAATGGTTGT 57.520 45.000 0.00 0.00 46.95 3.32
1382 1441 6.533730 TGAGCTTAGGATGTTGAAGAAGAAA 58.466 36.000 0.00 0.00 0.00 2.52
1687 1749 7.592885 AATGCAGCTAATGAATTATTCCAGT 57.407 32.000 2.22 0.00 35.17 4.00
1972 2035 1.888172 CGCGTGGGTTTGTGGTGTA 60.888 57.895 0.00 0.00 0.00 2.90
1985 2048 0.757561 TGGTGTATAGGGCTGCGCTA 60.758 55.000 25.63 25.63 33.62 4.26
2003 2066 2.686915 GCTAGTAACCGCTAGGACAGAA 59.313 50.000 0.00 0.00 41.02 3.02
2004 2067 3.318557 GCTAGTAACCGCTAGGACAGAAT 59.681 47.826 0.00 0.00 41.02 2.40
2139 2205 6.429385 TCCTTTGTTTTGCACTGAAATTTTGT 59.571 30.769 0.00 0.00 0.00 2.83
2488 2580 2.749776 TGACGAAACATGACACGACAT 58.250 42.857 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.103208 GCACGAATCGAGACTGGGAT 59.897 55.000 10.55 0.00 0.00 3.85
1 2 1.511305 GCACGAATCGAGACTGGGA 59.489 57.895 10.55 0.00 0.00 4.37
2 3 1.519455 GGCACGAATCGAGACTGGG 60.519 63.158 10.55 0.00 0.00 4.45
3 4 0.389817 TTGGCACGAATCGAGACTGG 60.390 55.000 10.55 0.00 0.00 4.00
4 5 0.716108 GTTGGCACGAATCGAGACTG 59.284 55.000 10.55 0.00 0.00 3.51
5 6 0.389948 GGTTGGCACGAATCGAGACT 60.390 55.000 10.55 0.00 0.00 3.24
6 7 1.359459 GGGTTGGCACGAATCGAGAC 61.359 60.000 10.55 3.74 0.00 3.36
7 8 1.079405 GGGTTGGCACGAATCGAGA 60.079 57.895 10.55 0.00 0.00 4.04
8 9 0.953471 TTGGGTTGGCACGAATCGAG 60.953 55.000 10.55 1.74 0.00 4.04
9 10 1.071642 TTGGGTTGGCACGAATCGA 59.928 52.632 10.55 0.00 0.00 3.59
10 11 1.209127 GTTGGGTTGGCACGAATCG 59.791 57.895 0.00 0.00 0.00 3.34
11 12 0.240945 CTGTTGGGTTGGCACGAATC 59.759 55.000 0.00 0.00 0.00 2.52
12 13 0.179004 TCTGTTGGGTTGGCACGAAT 60.179 50.000 0.00 0.00 0.00 3.34
13 14 1.098712 GTCTGTTGGGTTGGCACGAA 61.099 55.000 0.00 0.00 0.00 3.85
14 15 1.525077 GTCTGTTGGGTTGGCACGA 60.525 57.895 0.00 0.00 0.00 4.35
15 16 1.821759 TGTCTGTTGGGTTGGCACG 60.822 57.895 0.00 0.00 0.00 5.34
16 17 0.751643 AGTGTCTGTTGGGTTGGCAC 60.752 55.000 0.00 0.00 0.00 5.01
17 18 0.033601 AAGTGTCTGTTGGGTTGGCA 60.034 50.000 0.00 0.00 0.00 4.92
18 19 1.067060 GAAAGTGTCTGTTGGGTTGGC 59.933 52.381 0.00 0.00 0.00 4.52
19 20 1.333619 CGAAAGTGTCTGTTGGGTTGG 59.666 52.381 0.00 0.00 0.00 3.77
20 21 1.333619 CCGAAAGTGTCTGTTGGGTTG 59.666 52.381 0.00 0.00 0.00 3.77
21 22 1.210967 TCCGAAAGTGTCTGTTGGGTT 59.789 47.619 0.00 0.00 0.00 4.11
22 23 0.834612 TCCGAAAGTGTCTGTTGGGT 59.165 50.000 0.00 0.00 0.00 4.51
23 24 2.185004 ATCCGAAAGTGTCTGTTGGG 57.815 50.000 0.00 0.00 0.00 4.12
24 25 3.000727 GGTATCCGAAAGTGTCTGTTGG 58.999 50.000 0.00 0.00 0.00 3.77
25 26 3.926616 AGGTATCCGAAAGTGTCTGTTG 58.073 45.455 0.00 0.00 0.00 3.33
26 27 5.934402 ATAGGTATCCGAAAGTGTCTGTT 57.066 39.130 0.00 0.00 0.00 3.16
27 28 6.039493 CACTATAGGTATCCGAAAGTGTCTGT 59.961 42.308 4.43 0.00 31.48 3.41
28 29 6.439599 CACTATAGGTATCCGAAAGTGTCTG 58.560 44.000 4.43 0.00 31.48 3.51
29 30 5.009811 GCACTATAGGTATCCGAAAGTGTCT 59.990 44.000 4.43 0.00 35.32 3.41
30 31 5.221130 GCACTATAGGTATCCGAAAGTGTC 58.779 45.833 4.43 7.24 35.32 3.67
31 32 4.647853 TGCACTATAGGTATCCGAAAGTGT 59.352 41.667 4.43 0.00 35.32 3.55
32 33 4.982916 GTGCACTATAGGTATCCGAAAGTG 59.017 45.833 10.32 10.65 35.68 3.16
33 34 4.038883 GGTGCACTATAGGTATCCGAAAGT 59.961 45.833 17.98 0.00 0.00 2.66
34 35 4.281182 AGGTGCACTATAGGTATCCGAAAG 59.719 45.833 17.98 0.00 0.00 2.62
35 36 4.220724 AGGTGCACTATAGGTATCCGAAA 58.779 43.478 17.98 0.00 0.00 3.46
36 37 3.840991 AGGTGCACTATAGGTATCCGAA 58.159 45.455 17.98 0.00 0.00 4.30
37 38 3.520691 AGGTGCACTATAGGTATCCGA 57.479 47.619 17.98 0.00 0.00 4.55
38 39 4.602340 AAAGGTGCACTATAGGTATCCG 57.398 45.455 17.98 0.00 0.00 4.18
39 40 8.363761 ACTATAAAGGTGCACTATAGGTATCC 57.636 38.462 24.41 5.77 32.27 2.59
40 41 9.021807 TGACTATAAAGGTGCACTATAGGTATC 57.978 37.037 24.41 17.31 32.27 2.24
41 42 8.804204 GTGACTATAAAGGTGCACTATAGGTAT 58.196 37.037 24.41 14.31 32.27 2.73
42 43 7.232127 GGTGACTATAAAGGTGCACTATAGGTA 59.768 40.741 24.41 15.35 32.27 3.08
43 44 6.041751 GGTGACTATAAAGGTGCACTATAGGT 59.958 42.308 24.41 15.40 32.27 3.08
44 45 6.456501 GGTGACTATAAAGGTGCACTATAGG 58.543 44.000 24.41 13.38 32.27 2.57
45 46 6.041637 TGGGTGACTATAAAGGTGCACTATAG 59.958 42.308 21.39 21.39 33.60 1.31
46 47 5.900699 TGGGTGACTATAAAGGTGCACTATA 59.099 40.000 17.98 10.10 0.00 1.31
47 48 4.719773 TGGGTGACTATAAAGGTGCACTAT 59.280 41.667 17.98 9.45 0.00 2.12
48 49 4.098155 TGGGTGACTATAAAGGTGCACTA 58.902 43.478 17.98 1.23 0.00 2.74
49 50 2.910319 TGGGTGACTATAAAGGTGCACT 59.090 45.455 17.98 0.00 0.00 4.40
50 51 3.270877 CTGGGTGACTATAAAGGTGCAC 58.729 50.000 8.80 8.80 0.00 4.57
51 52 2.910319 ACTGGGTGACTATAAAGGTGCA 59.090 45.455 0.00 0.00 0.00 4.57
52 53 3.629142 ACTGGGTGACTATAAAGGTGC 57.371 47.619 0.00 0.00 0.00 5.01
53 54 5.107133 CGTAACTGGGTGACTATAAAGGTG 58.893 45.833 0.00 0.00 0.00 4.00
54 55 4.774200 ACGTAACTGGGTGACTATAAAGGT 59.226 41.667 0.00 0.00 0.00 3.50
55 56 5.334724 ACGTAACTGGGTGACTATAAAGG 57.665 43.478 0.00 0.00 0.00 3.11
56 57 7.385752 TCAAAACGTAACTGGGTGACTATAAAG 59.614 37.037 0.00 0.00 0.00 1.85
57 58 7.171337 GTCAAAACGTAACTGGGTGACTATAAA 59.829 37.037 0.00 0.00 32.94 1.40
58 59 6.646240 GTCAAAACGTAACTGGGTGACTATAA 59.354 38.462 0.00 0.00 32.94 0.98
59 60 6.158598 GTCAAAACGTAACTGGGTGACTATA 58.841 40.000 0.00 0.00 32.94 1.31
60 61 4.992951 GTCAAAACGTAACTGGGTGACTAT 59.007 41.667 0.00 0.00 32.94 2.12
61 62 4.370917 GTCAAAACGTAACTGGGTGACTA 58.629 43.478 0.00 0.00 32.94 2.59
62 63 3.200483 GTCAAAACGTAACTGGGTGACT 58.800 45.455 0.00 0.00 32.94 3.41
63 64 2.033492 CGTCAAAACGTAACTGGGTGAC 60.033 50.000 0.00 0.00 43.94 3.67
64 65 2.203401 CGTCAAAACGTAACTGGGTGA 58.797 47.619 0.00 0.00 43.94 4.02
65 66 2.656192 CGTCAAAACGTAACTGGGTG 57.344 50.000 0.00 0.00 43.94 4.61
76 77 4.094090 TGGGTGTAACAAACGTCAAAAC 57.906 40.909 0.00 0.00 39.98 2.43
77 78 4.778534 TTGGGTGTAACAAACGTCAAAA 57.221 36.364 0.00 0.00 39.98 2.44
78 79 4.734917 CTTTGGGTGTAACAAACGTCAAA 58.265 39.130 0.00 0.00 39.98 2.69
79 80 3.427773 GCTTTGGGTGTAACAAACGTCAA 60.428 43.478 0.00 0.00 39.98 3.18
80 81 2.097791 GCTTTGGGTGTAACAAACGTCA 59.902 45.455 0.00 0.00 39.98 4.35
81 82 2.097791 TGCTTTGGGTGTAACAAACGTC 59.902 45.455 0.00 0.00 39.98 4.34
82 83 2.093106 TGCTTTGGGTGTAACAAACGT 58.907 42.857 0.00 0.00 39.98 3.99
83 84 2.098443 AGTGCTTTGGGTGTAACAAACG 59.902 45.455 0.00 0.00 39.98 3.60
84 85 3.490249 GGAGTGCTTTGGGTGTAACAAAC 60.490 47.826 0.00 0.00 39.98 2.93
85 86 2.691011 GGAGTGCTTTGGGTGTAACAAA 59.309 45.455 0.00 0.00 39.98 2.83
86 87 2.092103 AGGAGTGCTTTGGGTGTAACAA 60.092 45.455 0.00 0.00 39.98 2.83
87 88 1.493022 AGGAGTGCTTTGGGTGTAACA 59.507 47.619 0.00 0.00 39.98 2.41
88 89 2.271944 AGGAGTGCTTTGGGTGTAAC 57.728 50.000 0.00 0.00 0.00 2.50
89 90 2.289195 CGTAGGAGTGCTTTGGGTGTAA 60.289 50.000 0.00 0.00 0.00 2.41
90 91 1.274167 CGTAGGAGTGCTTTGGGTGTA 59.726 52.381 0.00 0.00 0.00 2.90
91 92 0.034896 CGTAGGAGTGCTTTGGGTGT 59.965 55.000 0.00 0.00 0.00 4.16
92 93 2.840974 CGTAGGAGTGCTTTGGGTG 58.159 57.895 0.00 0.00 0.00 4.61
106 107 2.291741 GTGTAACTCCCGGATACCGTAG 59.708 54.545 0.73 8.43 46.80 3.51
107 108 2.297701 GTGTAACTCCCGGATACCGTA 58.702 52.381 0.73 0.00 46.80 4.02
108 109 1.106285 GTGTAACTCCCGGATACCGT 58.894 55.000 0.73 0.00 46.80 4.83
109 110 1.105457 TGTGTAACTCCCGGATACCG 58.895 55.000 0.73 3.03 42.30 4.02
110 111 3.387050 AGATTGTGTAACTCCCGGATACC 59.613 47.826 0.73 0.00 38.04 2.73
111 112 4.098960 TGAGATTGTGTAACTCCCGGATAC 59.901 45.833 0.73 1.10 38.04 2.24
112 113 4.283337 TGAGATTGTGTAACTCCCGGATA 58.717 43.478 0.73 0.00 38.04 2.59
113 114 3.104512 TGAGATTGTGTAACTCCCGGAT 58.895 45.455 0.73 0.00 38.04 4.18
114 115 2.531771 TGAGATTGTGTAACTCCCGGA 58.468 47.619 0.73 0.00 38.04 5.14
115 116 3.198068 CATGAGATTGTGTAACTCCCGG 58.802 50.000 0.00 0.00 38.04 5.73
116 117 3.198068 CCATGAGATTGTGTAACTCCCG 58.802 50.000 0.00 0.00 38.04 5.14
117 118 4.080863 AGACCATGAGATTGTGTAACTCCC 60.081 45.833 0.00 0.00 38.04 4.30
118 119 5.091261 AGACCATGAGATTGTGTAACTCC 57.909 43.478 0.00 0.00 38.04 3.85
119 120 6.758886 CCTTAGACCATGAGATTGTGTAACTC 59.241 42.308 0.00 0.00 38.04 3.01
120 121 6.440647 TCCTTAGACCATGAGATTGTGTAACT 59.559 38.462 0.00 0.00 38.04 2.24
121 122 6.640518 TCCTTAGACCATGAGATTGTGTAAC 58.359 40.000 0.00 0.00 37.35 2.50
122 123 6.867519 TCCTTAGACCATGAGATTGTGTAA 57.132 37.500 0.00 0.00 0.00 2.41
123 124 6.867519 TTCCTTAGACCATGAGATTGTGTA 57.132 37.500 0.00 0.00 0.00 2.90
124 125 5.762179 TTCCTTAGACCATGAGATTGTGT 57.238 39.130 0.00 0.00 0.00 3.72
125 126 6.825213 TCATTTCCTTAGACCATGAGATTGTG 59.175 38.462 0.00 0.00 0.00 3.33
126 127 6.962182 TCATTTCCTTAGACCATGAGATTGT 58.038 36.000 0.00 0.00 0.00 2.71
127 128 8.997323 GTATCATTTCCTTAGACCATGAGATTG 58.003 37.037 0.00 0.00 29.44 2.67
128 129 8.943085 AGTATCATTTCCTTAGACCATGAGATT 58.057 33.333 0.00 0.00 29.44 2.40
129 130 8.503428 AGTATCATTTCCTTAGACCATGAGAT 57.497 34.615 0.00 0.00 29.44 2.75
130 131 7.921041 AGTATCATTTCCTTAGACCATGAGA 57.079 36.000 0.00 0.00 29.44 3.27
131 132 8.206867 TCAAGTATCATTTCCTTAGACCATGAG 58.793 37.037 0.00 0.00 29.44 2.90
132 133 7.987458 GTCAAGTATCATTTCCTTAGACCATGA 59.013 37.037 0.00 0.00 0.00 3.07
133 134 7.770433 TGTCAAGTATCATTTCCTTAGACCATG 59.230 37.037 0.00 0.00 0.00 3.66
134 135 7.861629 TGTCAAGTATCATTTCCTTAGACCAT 58.138 34.615 0.00 0.00 0.00 3.55
135 136 7.252612 TGTCAAGTATCATTTCCTTAGACCA 57.747 36.000 0.00 0.00 0.00 4.02
136 137 8.738645 AATGTCAAGTATCATTTCCTTAGACC 57.261 34.615 0.00 0.00 31.35 3.85
143 144 9.508567 GCTTTTCTAATGTCAAGTATCATTTCC 57.491 33.333 0.00 0.00 36.06 3.13
149 150 9.709600 GCTAAAGCTTTTCTAATGTCAAGTATC 57.290 33.333 18.47 0.00 38.21 2.24
150 151 9.231297 TGCTAAAGCTTTTCTAATGTCAAGTAT 57.769 29.630 18.47 0.00 42.66 2.12
151 152 8.615878 TGCTAAAGCTTTTCTAATGTCAAGTA 57.384 30.769 18.47 0.96 42.66 2.24
152 153 7.510549 TGCTAAAGCTTTTCTAATGTCAAGT 57.489 32.000 18.47 0.00 42.66 3.16
153 154 8.694394 GTTTGCTAAAGCTTTTCTAATGTCAAG 58.306 33.333 18.47 5.49 42.66 3.02
154 155 7.378461 CGTTTGCTAAAGCTTTTCTAATGTCAA 59.622 33.333 18.47 7.35 42.66 3.18
155 156 6.855914 CGTTTGCTAAAGCTTTTCTAATGTCA 59.144 34.615 18.47 1.75 42.66 3.58
156 157 7.075741 TCGTTTGCTAAAGCTTTTCTAATGTC 58.924 34.615 18.47 1.59 42.66 3.06
157 158 6.966021 TCGTTTGCTAAAGCTTTTCTAATGT 58.034 32.000 18.47 0.00 42.66 2.71
158 159 7.591426 AGTTCGTTTGCTAAAGCTTTTCTAATG 59.409 33.333 18.47 16.09 42.66 1.90
159 160 7.649057 AGTTCGTTTGCTAAAGCTTTTCTAAT 58.351 30.769 18.47 0.00 42.66 1.73
160 161 7.023197 AGTTCGTTTGCTAAAGCTTTTCTAA 57.977 32.000 18.47 9.95 42.66 2.10
161 162 6.613755 AGTTCGTTTGCTAAAGCTTTTCTA 57.386 33.333 18.47 4.24 42.66 2.10
162 163 5.500645 AGTTCGTTTGCTAAAGCTTTTCT 57.499 34.783 18.47 0.00 42.66 2.52
163 164 6.140265 GTGTAGTTCGTTTGCTAAAGCTTTTC 59.860 38.462 18.47 10.34 42.66 2.29
164 165 5.969435 GTGTAGTTCGTTTGCTAAAGCTTTT 59.031 36.000 18.47 1.58 42.66 2.27
165 166 5.507974 GTGTAGTTCGTTTGCTAAAGCTTT 58.492 37.500 17.30 17.30 42.66 3.51
166 167 4.318546 CGTGTAGTTCGTTTGCTAAAGCTT 60.319 41.667 3.26 0.00 42.66 3.74
167 168 3.183775 CGTGTAGTTCGTTTGCTAAAGCT 59.816 43.478 3.26 0.00 42.66 3.74
168 169 3.182972 TCGTGTAGTTCGTTTGCTAAAGC 59.817 43.478 0.00 0.00 42.50 3.51
169 170 4.959631 TCGTGTAGTTCGTTTGCTAAAG 57.040 40.909 0.00 0.00 0.00 1.85
170 171 5.224888 AGATCGTGTAGTTCGTTTGCTAAA 58.775 37.500 0.00 0.00 0.00 1.85
171 172 4.801891 AGATCGTGTAGTTCGTTTGCTAA 58.198 39.130 0.00 0.00 0.00 3.09
172 173 4.430137 AGATCGTGTAGTTCGTTTGCTA 57.570 40.909 0.00 0.00 0.00 3.49
173 174 3.299340 AGATCGTGTAGTTCGTTTGCT 57.701 42.857 0.00 0.00 0.00 3.91
174 175 3.183775 ACAAGATCGTGTAGTTCGTTTGC 59.816 43.478 12.88 0.00 0.00 3.68
175 176 4.688063 CACAAGATCGTGTAGTTCGTTTG 58.312 43.478 14.10 0.00 32.00 2.93
176 177 4.966850 CACAAGATCGTGTAGTTCGTTT 57.033 40.909 14.10 0.00 32.00 3.60
186 187 5.109210 TCCTAAGCATAACACAAGATCGTG 58.891 41.667 7.13 7.13 42.81 4.35
187 188 5.339008 TCCTAAGCATAACACAAGATCGT 57.661 39.130 0.00 0.00 0.00 3.73
188 189 6.293081 CCAATCCTAAGCATAACACAAGATCG 60.293 42.308 0.00 0.00 0.00 3.69
189 190 6.016777 CCCAATCCTAAGCATAACACAAGATC 60.017 42.308 0.00 0.00 0.00 2.75
190 191 5.829924 CCCAATCCTAAGCATAACACAAGAT 59.170 40.000 0.00 0.00 0.00 2.40
191 192 5.192927 CCCAATCCTAAGCATAACACAAGA 58.807 41.667 0.00 0.00 0.00 3.02
192 193 4.949856 ACCCAATCCTAAGCATAACACAAG 59.050 41.667 0.00 0.00 0.00 3.16
193 194 4.929479 ACCCAATCCTAAGCATAACACAA 58.071 39.130 0.00 0.00 0.00 3.33
194 195 4.227300 AGACCCAATCCTAAGCATAACACA 59.773 41.667 0.00 0.00 0.00 3.72
195 196 4.781934 AGACCCAATCCTAAGCATAACAC 58.218 43.478 0.00 0.00 0.00 3.32
196 197 5.192927 CAAGACCCAATCCTAAGCATAACA 58.807 41.667 0.00 0.00 0.00 2.41
197 198 5.193679 ACAAGACCCAATCCTAAGCATAAC 58.806 41.667 0.00 0.00 0.00 1.89
198 199 5.437060 GACAAGACCCAATCCTAAGCATAA 58.563 41.667 0.00 0.00 0.00 1.90
199 200 4.141482 GGACAAGACCCAATCCTAAGCATA 60.141 45.833 0.00 0.00 0.00 3.14
200 201 3.372025 GGACAAGACCCAATCCTAAGCAT 60.372 47.826 0.00 0.00 0.00 3.79
201 202 2.026262 GGACAAGACCCAATCCTAAGCA 60.026 50.000 0.00 0.00 0.00 3.91
202 203 2.026262 TGGACAAGACCCAATCCTAAGC 60.026 50.000 0.00 0.00 32.06 3.09
203 204 4.080356 TGATGGACAAGACCCAATCCTAAG 60.080 45.833 0.00 0.00 37.22 2.18
204 205 3.849574 TGATGGACAAGACCCAATCCTAA 59.150 43.478 0.00 0.00 37.22 2.69
205 206 3.199946 GTGATGGACAAGACCCAATCCTA 59.800 47.826 0.00 0.00 37.22 2.94
206 207 2.025887 GTGATGGACAAGACCCAATCCT 60.026 50.000 0.00 0.00 37.22 3.24
207 208 2.290896 TGTGATGGACAAGACCCAATCC 60.291 50.000 0.00 0.00 37.22 3.01
208 209 3.071874 TGTGATGGACAAGACCCAATC 57.928 47.619 0.00 0.00 37.22 2.67
209 210 3.010472 TGATGTGATGGACAAGACCCAAT 59.990 43.478 0.00 0.00 38.36 3.16
210 211 2.374839 TGATGTGATGGACAAGACCCAA 59.625 45.455 0.00 0.00 38.36 4.12
211 212 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
212 213 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
213 214 4.521146 AGAATGATGTGATGGACAAGACC 58.479 43.478 0.00 0.00 38.36 3.85
214 215 4.574013 GGAGAATGATGTGATGGACAAGAC 59.426 45.833 0.00 0.00 38.36 3.01
215 216 4.472470 AGGAGAATGATGTGATGGACAAGA 59.528 41.667 0.00 0.00 38.36 3.02
216 217 4.778579 AGGAGAATGATGTGATGGACAAG 58.221 43.478 0.00 0.00 38.36 3.16
217 218 4.849813 AGGAGAATGATGTGATGGACAA 57.150 40.909 0.00 0.00 38.36 3.18
218 219 5.955961 TTAGGAGAATGATGTGATGGACA 57.044 39.130 0.00 0.00 39.53 4.02
219 220 6.528321 TCATTAGGAGAATGATGTGATGGAC 58.472 40.000 0.00 0.00 32.21 4.02
220 221 6.752285 TCATTAGGAGAATGATGTGATGGA 57.248 37.500 0.00 0.00 32.21 3.41
228 229 8.438373 ACAAGATCACATCATTAGGAGAATGAT 58.562 33.333 6.90 6.90 45.40 2.45
229 230 7.799081 ACAAGATCACATCATTAGGAGAATGA 58.201 34.615 2.66 2.66 40.50 2.57
230 231 8.447924 AACAAGATCACATCATTAGGAGAATG 57.552 34.615 0.00 0.00 0.00 2.67
232 233 9.770097 GATAACAAGATCACATCATTAGGAGAA 57.230 33.333 0.00 0.00 0.00 2.87
233 234 8.927411 TGATAACAAGATCACATCATTAGGAGA 58.073 33.333 0.00 0.00 30.75 3.71
234 235 9.551734 TTGATAACAAGATCACATCATTAGGAG 57.448 33.333 0.00 0.00 35.56 3.69
257 258 9.559732 CTAACTATGGACATTGGATGTTATTGA 57.440 33.333 0.00 0.00 45.03 2.57
258 259 8.786898 CCTAACTATGGACATTGGATGTTATTG 58.213 37.037 0.00 0.00 45.03 1.90
259 260 8.723365 TCCTAACTATGGACATTGGATGTTATT 58.277 33.333 0.00 0.00 45.03 1.40
260 261 8.275187 TCCTAACTATGGACATTGGATGTTAT 57.725 34.615 0.00 0.00 45.03 1.89
261 262 7.684317 TCCTAACTATGGACATTGGATGTTA 57.316 36.000 0.00 0.00 45.03 2.41
262 263 6.575244 TCCTAACTATGGACATTGGATGTT 57.425 37.500 0.00 0.00 45.03 2.71
263 264 8.071542 GGTTTCCTAACTATGGACATTGGATGT 61.072 40.741 0.00 0.00 39.14 3.06
264 265 6.263168 GGTTTCCTAACTATGGACATTGGATG 59.737 42.308 0.00 0.00 34.59 3.51
265 266 6.069088 TGGTTTCCTAACTATGGACATTGGAT 60.069 38.462 0.00 0.00 34.59 3.41
266 267 5.251932 TGGTTTCCTAACTATGGACATTGGA 59.748 40.000 0.00 0.00 34.59 3.53
267 268 5.505780 TGGTTTCCTAACTATGGACATTGG 58.494 41.667 0.00 0.00 34.59 3.16
268 269 7.031226 CATGGTTTCCTAACTATGGACATTG 57.969 40.000 6.51 0.00 44.77 2.82
276 277 6.831664 AGATGGTCATGGTTTCCTAACTAT 57.168 37.500 0.00 0.00 36.04 2.12
277 278 7.931015 ATAGATGGTCATGGTTTCCTAACTA 57.069 36.000 0.00 0.00 34.59 2.24
278 279 6.831664 ATAGATGGTCATGGTTTCCTAACT 57.168 37.500 0.00 0.00 34.59 2.24
279 280 7.054124 TCAATAGATGGTCATGGTTTCCTAAC 58.946 38.462 0.00 0.00 0.00 2.34
280 281 7.206789 TCAATAGATGGTCATGGTTTCCTAA 57.793 36.000 0.00 0.00 0.00 2.69
281 282 6.823286 TCAATAGATGGTCATGGTTTCCTA 57.177 37.500 0.00 0.00 0.00 2.94
282 283 5.715439 TCAATAGATGGTCATGGTTTCCT 57.285 39.130 0.00 0.00 0.00 3.36
283 284 6.064060 TGATCAATAGATGGTCATGGTTTCC 58.936 40.000 0.00 0.00 44.28 3.13
292 293 4.626042 AGCTCGTTGATCAATAGATGGTC 58.374 43.478 19.51 9.51 39.79 4.02
293 294 4.679373 AGCTCGTTGATCAATAGATGGT 57.321 40.909 19.51 14.02 33.72 3.55
294 295 5.777802 ACTAGCTCGTTGATCAATAGATGG 58.222 41.667 19.51 17.62 33.72 3.51
295 296 6.442112 TGACTAGCTCGTTGATCAATAGATG 58.558 40.000 19.51 12.48 33.72 2.90
296 297 6.641169 TGACTAGCTCGTTGATCAATAGAT 57.359 37.500 19.51 16.66 37.13 1.98
297 298 6.095580 AGTTGACTAGCTCGTTGATCAATAGA 59.904 38.462 19.51 16.55 0.00 1.98
298 299 6.269315 AGTTGACTAGCTCGTTGATCAATAG 58.731 40.000 12.12 13.07 0.00 1.73
299 300 6.208988 AGTTGACTAGCTCGTTGATCAATA 57.791 37.500 12.12 2.38 0.00 1.90
300 301 5.078411 AGTTGACTAGCTCGTTGATCAAT 57.922 39.130 12.12 0.00 0.00 2.57
301 302 4.521130 AGTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
302 303 4.941873 TCTAGTTGACTAGCTCGTTGATCA 59.058 41.667 12.30 0.00 44.24 2.92
303 304 5.487153 TCTAGTTGACTAGCTCGTTGATC 57.513 43.478 12.30 0.00 44.24 2.92
304 305 4.336993 CCTCTAGTTGACTAGCTCGTTGAT 59.663 45.833 12.30 0.00 44.24 2.57
305 306 3.690139 CCTCTAGTTGACTAGCTCGTTGA 59.310 47.826 12.30 0.00 44.24 3.18
306 307 3.732471 GCCTCTAGTTGACTAGCTCGTTG 60.732 52.174 12.30 0.75 44.24 4.10
307 308 2.424246 GCCTCTAGTTGACTAGCTCGTT 59.576 50.000 12.30 0.00 44.24 3.85
308 309 2.018515 GCCTCTAGTTGACTAGCTCGT 58.981 52.381 12.30 0.00 44.24 4.18
309 310 2.289547 GAGCCTCTAGTTGACTAGCTCG 59.710 54.545 12.30 0.00 44.24 5.03
310 311 3.066203 GTGAGCCTCTAGTTGACTAGCTC 59.934 52.174 17.34 17.34 44.24 4.09
311 312 3.020984 GTGAGCCTCTAGTTGACTAGCT 58.979 50.000 12.30 7.92 44.24 3.32
312 313 3.020984 AGTGAGCCTCTAGTTGACTAGC 58.979 50.000 12.30 3.61 44.24 3.42
313 314 4.819630 CCTAGTGAGCCTCTAGTTGACTAG 59.180 50.000 11.14 11.14 45.57 2.57
314 315 4.385421 CCCTAGTGAGCCTCTAGTTGACTA 60.385 50.000 0.00 0.00 34.72 2.59
315 316 3.626222 CCCTAGTGAGCCTCTAGTTGACT 60.626 52.174 0.00 0.00 34.72 3.41
316 317 2.691011 CCCTAGTGAGCCTCTAGTTGAC 59.309 54.545 0.00 0.00 34.72 3.18
317 318 2.581246 TCCCTAGTGAGCCTCTAGTTGA 59.419 50.000 0.00 4.76 34.72 3.18
318 319 2.691011 GTCCCTAGTGAGCCTCTAGTTG 59.309 54.545 0.00 3.20 34.72 3.16
319 320 2.312140 TGTCCCTAGTGAGCCTCTAGTT 59.688 50.000 0.00 0.00 34.72 2.24
320 321 1.923850 TGTCCCTAGTGAGCCTCTAGT 59.076 52.381 0.00 0.00 34.72 2.57
321 322 2.738587 TGTCCCTAGTGAGCCTCTAG 57.261 55.000 0.00 0.00 35.86 2.43
322 323 2.245028 ACATGTCCCTAGTGAGCCTCTA 59.755 50.000 0.00 0.00 0.00 2.43
323 324 1.007721 ACATGTCCCTAGTGAGCCTCT 59.992 52.381 0.00 0.00 0.00 3.69
324 325 1.490574 ACATGTCCCTAGTGAGCCTC 58.509 55.000 0.00 0.00 0.00 4.70
325 326 1.556911 CAACATGTCCCTAGTGAGCCT 59.443 52.381 0.00 0.00 0.00 4.58
326 327 1.279271 ACAACATGTCCCTAGTGAGCC 59.721 52.381 0.00 0.00 0.00 4.70
327 328 2.350522 CACAACATGTCCCTAGTGAGC 58.649 52.381 0.00 0.00 0.00 4.26
328 329 2.303022 ACCACAACATGTCCCTAGTGAG 59.697 50.000 0.00 0.00 0.00 3.51
329 330 2.301870 GACCACAACATGTCCCTAGTGA 59.698 50.000 0.00 0.00 0.00 3.41
330 331 2.303022 AGACCACAACATGTCCCTAGTG 59.697 50.000 0.00 3.77 31.76 2.74
331 332 2.621070 AGACCACAACATGTCCCTAGT 58.379 47.619 0.00 0.00 31.76 2.57
332 333 4.162320 ACATAGACCACAACATGTCCCTAG 59.838 45.833 0.00 0.00 31.76 3.02
333 334 4.101114 ACATAGACCACAACATGTCCCTA 58.899 43.478 0.00 0.00 31.76 3.53
334 335 2.912956 ACATAGACCACAACATGTCCCT 59.087 45.455 0.00 0.00 31.76 4.20
335 336 3.350219 ACATAGACCACAACATGTCCC 57.650 47.619 0.00 0.00 31.76 4.46
336 337 6.037172 GTGAATACATAGACCACAACATGTCC 59.963 42.308 0.00 0.00 33.78 4.02
337 338 6.593770 TGTGAATACATAGACCACAACATGTC 59.406 38.462 0.00 0.00 35.16 3.06
338 339 6.371548 GTGTGAATACATAGACCACAACATGT 59.628 38.462 0.00 0.00 39.13 3.21
339 340 6.371271 TGTGTGAATACATAGACCACAACATG 59.629 38.462 0.00 0.00 39.13 3.21
340 341 6.472016 TGTGTGAATACATAGACCACAACAT 58.528 36.000 0.00 0.00 39.13 2.71
341 342 5.859495 TGTGTGAATACATAGACCACAACA 58.141 37.500 0.00 0.00 39.13 3.33
342 343 6.371548 ACATGTGTGAATACATAGACCACAAC 59.628 38.462 0.00 0.00 39.17 3.32
343 344 6.472016 ACATGTGTGAATACATAGACCACAA 58.528 36.000 0.00 0.00 39.17 3.33
344 345 6.048732 ACATGTGTGAATACATAGACCACA 57.951 37.500 0.00 0.00 39.17 4.17
345 346 8.662781 AATACATGTGTGAATACATAGACCAC 57.337 34.615 9.11 0.00 39.17 4.16
346 347 9.758651 GTAATACATGTGTGAATACATAGACCA 57.241 33.333 9.11 0.00 39.17 4.02
347 348 8.912658 CGTAATACATGTGTGAATACATAGACC 58.087 37.037 9.11 0.00 39.17 3.85
348 349 8.912658 CCGTAATACATGTGTGAATACATAGAC 58.087 37.037 9.11 0.00 39.17 2.59
349 350 8.635328 ACCGTAATACATGTGTGAATACATAGA 58.365 33.333 9.11 0.00 39.17 1.98
350 351 8.812147 ACCGTAATACATGTGTGAATACATAG 57.188 34.615 9.11 0.00 39.17 2.23
351 352 9.602568 AAACCGTAATACATGTGTGAATACATA 57.397 29.630 9.11 0.00 39.17 2.29
352 353 8.500753 AAACCGTAATACATGTGTGAATACAT 57.499 30.769 9.11 0.00 41.77 2.29
353 354 7.064847 GGAAACCGTAATACATGTGTGAATACA 59.935 37.037 9.11 0.00 34.63 2.29
354 355 7.404203 GGAAACCGTAATACATGTGTGAATAC 58.596 38.462 9.11 0.76 0.00 1.89
355 356 6.256104 CGGAAACCGTAATACATGTGTGAATA 59.744 38.462 9.11 0.00 42.73 1.75
356 357 5.064198 CGGAAACCGTAATACATGTGTGAAT 59.936 40.000 9.11 0.00 42.73 2.57
357 358 4.389382 CGGAAACCGTAATACATGTGTGAA 59.611 41.667 9.11 0.00 42.73 3.18
358 359 3.927758 CGGAAACCGTAATACATGTGTGA 59.072 43.478 9.11 0.00 42.73 3.58
359 360 3.062909 CCGGAAACCGTAATACATGTGTG 59.937 47.826 9.11 0.00 46.80 3.82
360 361 3.264104 CCGGAAACCGTAATACATGTGT 58.736 45.455 9.11 0.00 46.80 3.72
361 362 3.264104 ACCGGAAACCGTAATACATGTG 58.736 45.455 9.46 0.00 46.80 3.21
362 363 3.055963 TGACCGGAAACCGTAATACATGT 60.056 43.478 9.46 2.69 46.80 3.21
363 364 3.523547 TGACCGGAAACCGTAATACATG 58.476 45.455 9.46 0.00 46.80 3.21
364 365 3.891422 TGACCGGAAACCGTAATACAT 57.109 42.857 9.46 0.00 46.80 2.29
365 366 3.674528 TTGACCGGAAACCGTAATACA 57.325 42.857 9.46 0.14 46.80 2.29
366 367 5.108517 TGTATTGACCGGAAACCGTAATAC 58.891 41.667 9.46 21.03 46.80 1.89
367 368 5.336150 TGTATTGACCGGAAACCGTAATA 57.664 39.130 9.46 8.07 46.80 0.98
368 369 4.205065 TGTATTGACCGGAAACCGTAAT 57.795 40.909 9.46 8.88 46.80 1.89
369 370 3.674528 TGTATTGACCGGAAACCGTAA 57.325 42.857 9.46 2.59 46.80 3.18
370 371 3.674528 TTGTATTGACCGGAAACCGTA 57.325 42.857 9.46 0.00 46.80 4.02
371 372 2.547299 TTGTATTGACCGGAAACCGT 57.453 45.000 9.46 0.00 46.80 4.83
373 374 5.883503 TGTAATTGTATTGACCGGAAACC 57.116 39.130 9.46 0.00 0.00 3.27
374 375 7.079182 TGATGTAATTGTATTGACCGGAAAC 57.921 36.000 9.46 0.00 0.00 2.78
375 376 7.554476 TCATGATGTAATTGTATTGACCGGAAA 59.446 33.333 9.46 1.81 0.00 3.13
376 377 7.051000 TCATGATGTAATTGTATTGACCGGAA 58.949 34.615 9.46 0.00 0.00 4.30
377 378 6.587273 TCATGATGTAATTGTATTGACCGGA 58.413 36.000 9.46 0.00 0.00 5.14
378 379 6.859420 TCATGATGTAATTGTATTGACCGG 57.141 37.500 0.00 0.00 0.00 5.28
404 405 9.599866 TTTCGTCATTCATGATAATTGTCTACT 57.400 29.630 0.00 0.00 39.30 2.57
438 439 9.533831 CCCTAGAGGCAATAATAAAATGGTTAT 57.466 33.333 0.00 0.00 0.00 1.89
439 440 8.934023 CCCTAGAGGCAATAATAAAATGGTTA 57.066 34.615 0.00 0.00 0.00 2.85
440 441 7.839680 CCCTAGAGGCAATAATAAAATGGTT 57.160 36.000 0.00 0.00 0.00 3.67
456 457 4.141390 ACTGTTGGAAATATGCCCTAGAGG 60.141 45.833 0.00 0.00 39.47 3.69
457 458 5.041191 ACTGTTGGAAATATGCCCTAGAG 57.959 43.478 0.00 0.00 0.00 2.43
458 459 6.569127 TTACTGTTGGAAATATGCCCTAGA 57.431 37.500 0.00 0.00 0.00 2.43
459 460 6.998074 TGATTACTGTTGGAAATATGCCCTAG 59.002 38.462 0.00 0.00 0.00 3.02
460 461 6.905736 TGATTACTGTTGGAAATATGCCCTA 58.094 36.000 0.00 0.00 0.00 3.53
461 462 5.765510 TGATTACTGTTGGAAATATGCCCT 58.234 37.500 0.00 0.00 0.00 5.19
462 463 6.127479 TGTTGATTACTGTTGGAAATATGCCC 60.127 38.462 0.00 0.00 0.00 5.36
463 464 6.862209 TGTTGATTACTGTTGGAAATATGCC 58.138 36.000 0.00 0.00 0.00 4.40
464 465 7.812191 TGTTGTTGATTACTGTTGGAAATATGC 59.188 33.333 0.00 0.00 0.00 3.14
465 466 9.859427 ATGTTGTTGATTACTGTTGGAAATATG 57.141 29.630 0.00 0.00 0.00 1.78
467 468 9.072375 TGATGTTGTTGATTACTGTTGGAAATA 57.928 29.630 0.00 0.00 0.00 1.40
468 469 7.950512 TGATGTTGTTGATTACTGTTGGAAAT 58.049 30.769 0.00 0.00 0.00 2.17
469 470 7.340122 TGATGTTGTTGATTACTGTTGGAAA 57.660 32.000 0.00 0.00 0.00 3.13
470 471 6.951062 TGATGTTGTTGATTACTGTTGGAA 57.049 33.333 0.00 0.00 0.00 3.53
471 472 6.714356 TGATGATGTTGTTGATTACTGTTGGA 59.286 34.615 0.00 0.00 0.00 3.53
472 473 6.912082 TGATGATGTTGTTGATTACTGTTGG 58.088 36.000 0.00 0.00 0.00 3.77
473 474 7.486870 CCATGATGATGTTGTTGATTACTGTTG 59.513 37.037 0.00 0.00 0.00 3.33
474 475 7.363181 CCCATGATGATGTTGTTGATTACTGTT 60.363 37.037 0.00 0.00 0.00 3.16
475 476 6.095860 CCCATGATGATGTTGTTGATTACTGT 59.904 38.462 0.00 0.00 0.00 3.55
476 477 6.095860 ACCCATGATGATGTTGTTGATTACTG 59.904 38.462 0.00 0.00 0.00 2.74
477 478 6.189859 ACCCATGATGATGTTGTTGATTACT 58.810 36.000 0.00 0.00 0.00 2.24
478 479 6.319658 AGACCCATGATGATGTTGTTGATTAC 59.680 38.462 0.00 0.00 0.00 1.89
479 480 6.425735 AGACCCATGATGATGTTGTTGATTA 58.574 36.000 0.00 0.00 0.00 1.75
480 481 5.266788 AGACCCATGATGATGTTGTTGATT 58.733 37.500 0.00 0.00 0.00 2.57
481 482 4.863548 AGACCCATGATGATGTTGTTGAT 58.136 39.130 0.00 0.00 0.00 2.57
482 483 4.264253 GAGACCCATGATGATGTTGTTGA 58.736 43.478 0.00 0.00 0.00 3.18
483 484 3.379372 GGAGACCCATGATGATGTTGTTG 59.621 47.826 0.00 0.00 0.00 3.33
484 485 3.624777 GGAGACCCATGATGATGTTGTT 58.375 45.455 0.00 0.00 0.00 2.83
485 486 2.420547 CGGAGACCCATGATGATGTTGT 60.421 50.000 0.00 0.00 0.00 3.32
486 487 2.216046 CGGAGACCCATGATGATGTTG 58.784 52.381 0.00 0.00 0.00 3.33
487 488 1.475751 GCGGAGACCCATGATGATGTT 60.476 52.381 0.00 0.00 0.00 2.71
488 489 0.107456 GCGGAGACCCATGATGATGT 59.893 55.000 0.00 0.00 0.00 3.06
489 490 0.395686 AGCGGAGACCCATGATGATG 59.604 55.000 0.00 0.00 0.00 3.07
490 491 0.683973 GAGCGGAGACCCATGATGAT 59.316 55.000 0.00 0.00 0.00 2.45
491 492 0.687427 TGAGCGGAGACCCATGATGA 60.687 55.000 0.00 0.00 0.00 2.92
492 493 0.395686 ATGAGCGGAGACCCATGATG 59.604 55.000 0.00 0.00 0.00 3.07
493 494 1.898472 CTATGAGCGGAGACCCATGAT 59.102 52.381 0.00 0.00 0.00 2.45
494 495 1.332195 CTATGAGCGGAGACCCATGA 58.668 55.000 0.00 0.00 0.00 3.07
495 496 0.319728 CCTATGAGCGGAGACCCATG 59.680 60.000 0.00 0.00 0.00 3.66
496 497 1.476007 GCCTATGAGCGGAGACCCAT 61.476 60.000 0.00 0.00 0.00 4.00
497 498 2.134287 GCCTATGAGCGGAGACCCA 61.134 63.158 0.00 0.00 0.00 4.51
498 499 1.834822 AGCCTATGAGCGGAGACCC 60.835 63.158 0.00 0.00 38.01 4.46
499 500 1.365633 CAGCCTATGAGCGGAGACC 59.634 63.158 0.00 0.00 38.01 3.85
500 501 1.300542 GCAGCCTATGAGCGGAGAC 60.301 63.158 0.00 0.00 38.01 3.36
501 502 1.742324 CTGCAGCCTATGAGCGGAGA 61.742 60.000 0.00 0.00 36.79 3.71
502 503 1.300775 CTGCAGCCTATGAGCGGAG 60.301 63.158 0.00 0.00 36.79 4.63
503 504 2.817424 CTGCAGCCTATGAGCGGA 59.183 61.111 0.00 0.00 36.79 5.54
504 505 2.971413 GCTGCAGCCTATGAGCGG 60.971 66.667 28.76 0.00 38.01 5.52
505 506 1.955157 GAGCTGCAGCCTATGAGCG 60.955 63.158 34.39 0.00 43.38 5.03
506 507 0.678395 TAGAGCTGCAGCCTATGAGC 59.322 55.000 34.39 14.90 43.38 4.26
507 508 1.337074 GCTAGAGCTGCAGCCTATGAG 60.337 57.143 34.39 23.43 43.38 2.90
508 509 0.678395 GCTAGAGCTGCAGCCTATGA 59.322 55.000 34.39 14.83 43.38 2.15
509 510 3.214045 GCTAGAGCTGCAGCCTATG 57.786 57.895 34.39 23.85 43.38 2.23
520 521 1.219393 GTGGTGGTGGAGCTAGAGC 59.781 63.158 0.00 0.00 42.49 4.09
521 522 1.901085 GGTGGTGGTGGAGCTAGAG 59.099 63.158 0.00 0.00 0.00 2.43
522 523 1.982395 CGGTGGTGGTGGAGCTAGA 60.982 63.158 0.00 0.00 0.00 2.43
523 524 2.579201 CGGTGGTGGTGGAGCTAG 59.421 66.667 0.00 0.00 0.00 3.42
524 525 3.702048 GCGGTGGTGGTGGAGCTA 61.702 66.667 0.00 0.00 0.00 3.32
548 549 0.105039 AAGCTAATCCGGCTCCGAAG 59.895 55.000 10.28 3.18 42.83 3.79
549 550 0.104304 GAAGCTAATCCGGCTCCGAA 59.896 55.000 10.28 0.00 42.83 4.30
550 551 0.755698 AGAAGCTAATCCGGCTCCGA 60.756 55.000 10.28 0.00 42.83 4.55
551 552 0.105039 AAGAAGCTAATCCGGCTCCG 59.895 55.000 0.00 0.48 39.30 4.63
552 553 2.333688 AAAGAAGCTAATCCGGCTCC 57.666 50.000 0.00 0.00 39.30 4.70
553 554 6.378710 AATTAAAAGAAGCTAATCCGGCTC 57.621 37.500 0.00 0.00 39.30 4.70
554 555 7.175119 GGATAATTAAAAGAAGCTAATCCGGCT 59.825 37.037 0.00 0.00 42.31 5.52
555 556 7.175119 AGGATAATTAAAAGAAGCTAATCCGGC 59.825 37.037 0.00 0.00 36.36 6.13
556 557 8.622948 AGGATAATTAAAAGAAGCTAATCCGG 57.377 34.615 0.00 0.00 36.36 5.14
561 562 9.869757 GGCAAAAGGATAATTAAAAGAAGCTAA 57.130 29.630 0.00 0.00 0.00 3.09
562 563 8.474831 GGGCAAAAGGATAATTAAAAGAAGCTA 58.525 33.333 0.00 0.00 0.00 3.32
563 564 7.180946 AGGGCAAAAGGATAATTAAAAGAAGCT 59.819 33.333 0.00 0.00 0.00 3.74
564 565 7.331026 AGGGCAAAAGGATAATTAAAAGAAGC 58.669 34.615 0.00 0.00 0.00 3.86
567 568 9.541884 ACTAAGGGCAAAAGGATAATTAAAAGA 57.458 29.630 0.00 0.00 0.00 2.52
568 569 9.586435 CACTAAGGGCAAAAGGATAATTAAAAG 57.414 33.333 0.00 0.00 0.00 2.27
569 570 8.536175 CCACTAAGGGCAAAAGGATAATTAAAA 58.464 33.333 0.00 0.00 0.00 1.52
570 571 7.676468 ACCACTAAGGGCAAAAGGATAATTAAA 59.324 33.333 0.00 0.00 43.89 1.52
637 638 1.276989 CACGGACTAGGGGCAAAACTA 59.723 52.381 0.00 0.00 0.00 2.24
744 745 3.426615 ACGGTCTGAATAAAATTGGCCA 58.573 40.909 0.00 0.00 0.00 5.36
773 774 4.659172 CTGGGTCCCGCAAGCCAA 62.659 66.667 2.65 0.00 45.65 4.52
880 885 4.421479 CGCTCTCTCGCCGTGGTT 62.421 66.667 0.00 0.00 0.00 3.67
969 974 1.153823 CGAACGGGATCTCAACGCT 60.154 57.895 0.00 0.00 0.00 5.07
1583 1643 8.519799 TTAAATGTTGGTCACTTCTTCTCTTT 57.480 30.769 0.00 0.00 0.00 2.52
1687 1749 9.620259 AAAAATTCTAACCTTAATTGTTTGGCA 57.380 25.926 0.00 0.00 0.00 4.92
1898 1961 2.538222 TGTGCATTTTCCACCCATCAT 58.462 42.857 0.00 0.00 32.30 2.45
1902 1965 3.634397 TTTTTGTGCATTTTCCACCCA 57.366 38.095 0.00 0.00 32.30 4.51
1942 2005 2.280524 CACGCGGTCTTGGGTTCA 60.281 61.111 12.47 0.00 32.02 3.18
1985 2048 2.159085 GCATTCTGTCCTAGCGGTTACT 60.159 50.000 0.00 0.00 0.00 2.24
2003 2066 2.880443 ACCCATGTCAAACTCTTGCAT 58.120 42.857 0.00 0.00 32.79 3.96
2004 2067 2.363306 ACCCATGTCAAACTCTTGCA 57.637 45.000 0.00 0.00 32.14 4.08
2070 2134 4.488126 AACATTCACGGTCTCACATTTG 57.512 40.909 0.00 0.00 0.00 2.32
2139 2205 3.215975 CGTTTTCAACCTTCCAACCCTA 58.784 45.455 0.00 0.00 0.00 3.53
2279 2350 4.510571 GTGAGAAGCCCTCCGTTTTATTA 58.489 43.478 1.79 0.00 41.25 0.98
2436 2514 8.553696 CCGTGAACTTATTATTGTAATGGTACC 58.446 37.037 4.43 4.43 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.