Multiple sequence alignment - TraesCS2B01G578200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G578200 chr2B 100.000 5079 0 0 1 5079 766230872 766235950 0.000000e+00 9380.0
1 TraesCS2B01G578200 chr2A 91.596 4510 254 54 506 4938 755702462 755706923 0.000000e+00 6113.0
2 TraesCS2B01G578200 chr2A 92.517 147 10 1 4933 5079 755710267 755710412 5.150000e-50 209.0
3 TraesCS2B01G578200 chr2D 91.557 3885 215 44 720 4523 624302863 624306715 0.000000e+00 5252.0
4 TraesCS2B01G578200 chr2D 94.826 947 37 3 1109 2043 63545727 63544781 0.000000e+00 1467.0
5 TraesCS2B01G578200 chr2D 91.860 516 38 2 4568 5079 624306713 624307228 0.000000e+00 717.0
6 TraesCS2B01G578200 chr2D 95.821 335 14 0 1 335 79333993 79333659 4.470000e-150 542.0
7 TraesCS2B01G578200 chr2D 89.189 222 23 1 500 721 624302518 624302738 5.010000e-70 276.0
8 TraesCS2B01G578200 chr2D 93.750 112 5 2 377 487 624302688 624302798 3.150000e-37 167.0
9 TraesCS2B01G578200 chr2D 96.040 101 4 0 387 487 624302751 624302851 1.130000e-36 165.0
10 TraesCS2B01G578200 chr3A 80.162 1361 222 30 984 2329 568018302 568019629 0.000000e+00 974.0
11 TraesCS2B01G578200 chr3A 79.197 1245 212 27 1090 2327 567975946 567977150 0.000000e+00 821.0
12 TraesCS2B01G578200 chr3A 82.035 462 60 15 2606 3046 568096708 568097167 6.210000e-99 372.0
13 TraesCS2B01G578200 chr3D 79.779 1355 229 31 989 2329 429786764 429788087 0.000000e+00 942.0
14 TraesCS2B01G578200 chr3D 79.952 1247 201 31 1089 2327 429724387 429725592 0.000000e+00 872.0
15 TraesCS2B01G578200 chr3D 77.220 856 158 24 3190 4039 429727203 429728027 2.770000e-127 466.0
16 TraesCS2B01G578200 chr3D 82.713 457 63 13 2603 3045 430051917 430052371 4.770000e-105 392.0
17 TraesCS2B01G578200 chr3D 82.159 454 63 14 2603 3046 429911126 429911571 1.730000e-99 374.0
18 TraesCS2B01G578200 chr3D 79.070 473 76 16 3540 3996 429912049 429912514 2.300000e-78 303.0
19 TraesCS2B01G578200 chr3B 79.845 1290 220 26 1051 2329 562273018 562274278 0.000000e+00 905.0
20 TraesCS2B01G578200 chr3B 79.905 1259 197 33 1082 2327 561970839 561972054 0.000000e+00 872.0
21 TraesCS2B01G578200 chr3B 79.013 1277 219 32 1067 2329 562401825 562403066 0.000000e+00 828.0
22 TraesCS2B01G578200 chr3B 77.532 859 150 26 3190 4039 561973748 561974572 1.280000e-130 477.0
23 TraesCS2B01G578200 chr3B 83.188 458 56 17 2603 3046 562403358 562403808 2.850000e-107 399.0
24 TraesCS2B01G578200 chr6D 96.716 335 11 0 1 335 77827228 77827562 4.440000e-155 558.0
25 TraesCS2B01G578200 chr6D 96.119 335 13 0 1 335 384285236 384284902 9.610000e-152 547.0
26 TraesCS2B01G578200 chr6D 95.000 40 2 0 339 378 4781058 4781097 4.250000e-06 63.9
27 TraesCS2B01G578200 chr7B 96.429 336 11 1 1 335 388838835 388838500 2.070000e-153 553.0
28 TraesCS2B01G578200 chr7B 96.429 336 11 1 1 335 388867364 388867029 2.070000e-153 553.0
29 TraesCS2B01G578200 chr7B 96.119 335 13 0 1 335 337925114 337925448 9.610000e-152 547.0
30 TraesCS2B01G578200 chr7B 96.131 336 12 1 1 335 388852760 388852425 9.610000e-152 547.0
31 TraesCS2B01G578200 chr7B 95.833 336 13 1 1 335 388824705 388824370 4.470000e-150 542.0
32 TraesCS2B01G578200 chr5D 96.119 335 13 0 1 335 497788497 497788831 9.610000e-152 547.0
33 TraesCS2B01G578200 chrUn 91.892 111 9 0 377 487 23192699 23192809 6.810000e-34 156.0
34 TraesCS2B01G578200 chrUn 96.429 84 3 0 638 721 23192666 23192749 6.860000e-29 139.0
35 TraesCS2B01G578200 chrUn 92.632 95 3 4 646 736 23192547 23192641 3.190000e-27 134.0
36 TraesCS2B01G578200 chrUn 97.561 41 1 0 440 480 23192582 23192622 2.540000e-08 71.3
37 TraesCS2B01G578200 chr4A 100.000 36 0 0 339 374 481421932 481421897 3.280000e-07 67.6
38 TraesCS2B01G578200 chr6B 94.872 39 2 0 340 378 485460143 485460105 1.530000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G578200 chr2B 766230872 766235950 5078 False 9380.0 9380 100.0000 1 5079 1 chr2B.!!$F1 5078
1 TraesCS2B01G578200 chr2A 755702462 755710412 7950 False 3161.0 6113 92.0565 506 5079 2 chr2A.!!$F1 4573
2 TraesCS2B01G578200 chr2D 63544781 63545727 946 True 1467.0 1467 94.8260 1109 2043 1 chr2D.!!$R1 934
3 TraesCS2B01G578200 chr2D 624302518 624307228 4710 False 1315.4 5252 92.4792 377 5079 5 chr2D.!!$F1 4702
4 TraesCS2B01G578200 chr3A 568018302 568019629 1327 False 974.0 974 80.1620 984 2329 1 chr3A.!!$F2 1345
5 TraesCS2B01G578200 chr3A 567975946 567977150 1204 False 821.0 821 79.1970 1090 2327 1 chr3A.!!$F1 1237
6 TraesCS2B01G578200 chr3D 429786764 429788087 1323 False 942.0 942 79.7790 989 2329 1 chr3D.!!$F1 1340
7 TraesCS2B01G578200 chr3D 429724387 429728027 3640 False 669.0 872 78.5860 1089 4039 2 chr3D.!!$F3 2950
8 TraesCS2B01G578200 chr3D 429911126 429912514 1388 False 338.5 374 80.6145 2603 3996 2 chr3D.!!$F4 1393
9 TraesCS2B01G578200 chr3B 562273018 562274278 1260 False 905.0 905 79.8450 1051 2329 1 chr3B.!!$F1 1278
10 TraesCS2B01G578200 chr3B 561970839 561974572 3733 False 674.5 872 78.7185 1082 4039 2 chr3B.!!$F2 2957
11 TraesCS2B01G578200 chr3B 562401825 562403808 1983 False 613.5 828 81.1005 1067 3046 2 chr3B.!!$F3 1979

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.033642 GTACATAGAGGGAAGCGGGC 59.966 60.0 0.0 0.0 0.0 6.13 F
265 266 0.034477 CATACCCACAACCCAGGACC 60.034 60.0 0.0 0.0 0.0 4.46 F
928 1061 0.035317 GGCATCCAGTCACACTCACA 59.965 55.0 0.0 0.0 0.0 3.58 F
1068 1222 0.178921 TCCTGTCCCTCTCAGTTGCT 60.179 55.0 0.0 0.0 0.0 3.91 F
2601 3644 0.618981 GGGACGATCAGGGGTTTTCT 59.381 55.0 0.0 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1065 1219 0.034337 GGTCCAACTTGTCGGTAGCA 59.966 55.000 0.0 0.0 0.00 3.49 R
1068 1222 1.342174 GTCTGGTCCAACTTGTCGGTA 59.658 52.381 0.0 0.0 0.00 4.02 R
2654 3697 1.028868 GGCCAGAATCACTGCCAGAC 61.029 60.000 0.0 0.0 44.52 3.51 R
3196 4394 2.793933 CGCTTTTCTTCATCTGCATGG 58.206 47.619 0.0 0.0 0.00 3.66 R
4687 5994 0.033504 TTCGAGACCACCAACTGCTC 59.966 55.000 0.0 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.124901 CTGCGCCCACCGGAAATA 60.125 61.111 9.46 0.00 36.65 1.40
20 21 1.525995 CTGCGCCCACCGGAAATAT 60.526 57.895 9.46 0.00 36.65 1.28
21 22 1.507141 CTGCGCCCACCGGAAATATC 61.507 60.000 9.46 0.00 36.65 1.63
22 23 2.258726 GCGCCCACCGGAAATATCC 61.259 63.158 9.46 0.00 42.80 2.59
23 24 1.147376 CGCCCACCGGAAATATCCA 59.853 57.895 9.46 0.00 46.97 3.41
24 25 1.164041 CGCCCACCGGAAATATCCAC 61.164 60.000 9.46 0.00 46.97 4.02
25 26 0.822121 GCCCACCGGAAATATCCACC 60.822 60.000 9.46 0.00 46.97 4.61
26 27 0.548989 CCCACCGGAAATATCCACCA 59.451 55.000 9.46 0.00 46.97 4.17
27 28 1.675552 CCACCGGAAATATCCACCAC 58.324 55.000 9.46 0.00 46.97 4.16
28 29 1.295792 CACCGGAAATATCCACCACG 58.704 55.000 9.46 0.00 46.97 4.94
29 30 0.463116 ACCGGAAATATCCACCACGC 60.463 55.000 9.46 0.00 46.97 5.34
30 31 0.179056 CCGGAAATATCCACCACGCT 60.179 55.000 0.00 0.00 46.97 5.07
31 32 1.217882 CGGAAATATCCACCACGCTC 58.782 55.000 0.00 0.00 46.97 5.03
32 33 1.594331 GGAAATATCCACCACGCTCC 58.406 55.000 0.00 0.00 45.79 4.70
33 34 1.134220 GGAAATATCCACCACGCTCCA 60.134 52.381 0.00 0.00 45.79 3.86
34 35 2.639065 GAAATATCCACCACGCTCCAA 58.361 47.619 0.00 0.00 0.00 3.53
35 36 3.214328 GAAATATCCACCACGCTCCAAT 58.786 45.455 0.00 0.00 0.00 3.16
36 37 2.260844 ATATCCACCACGCTCCAATG 57.739 50.000 0.00 0.00 0.00 2.82
37 38 0.463654 TATCCACCACGCTCCAATGC 60.464 55.000 0.00 0.00 0.00 3.56
38 39 3.443045 CCACCACGCTCCAATGCC 61.443 66.667 0.00 0.00 0.00 4.40
39 40 2.672651 CACCACGCTCCAATGCCA 60.673 61.111 0.00 0.00 0.00 4.92
40 41 2.048023 CACCACGCTCCAATGCCAT 61.048 57.895 0.00 0.00 0.00 4.40
41 42 1.750399 ACCACGCTCCAATGCCATC 60.750 57.895 0.00 0.00 0.00 3.51
42 43 2.711311 CACGCTCCAATGCCATCG 59.289 61.111 0.00 0.00 0.00 3.84
43 44 1.815003 CACGCTCCAATGCCATCGA 60.815 57.895 0.00 0.00 0.00 3.59
44 45 1.522355 ACGCTCCAATGCCATCGAG 60.522 57.895 0.00 0.00 0.00 4.04
45 46 1.522355 CGCTCCAATGCCATCGAGT 60.522 57.895 0.00 0.00 0.00 4.18
46 47 1.493950 CGCTCCAATGCCATCGAGTC 61.494 60.000 0.00 0.00 0.00 3.36
47 48 1.493950 GCTCCAATGCCATCGAGTCG 61.494 60.000 6.09 6.09 0.00 4.18
48 49 1.493950 CTCCAATGCCATCGAGTCGC 61.494 60.000 7.92 0.00 0.00 5.19
49 50 2.537560 CCAATGCCATCGAGTCGCC 61.538 63.158 7.92 0.00 0.00 5.54
50 51 2.586079 AATGCCATCGAGTCGCCG 60.586 61.111 7.92 0.46 0.00 6.46
54 55 4.847516 CCATCGAGTCGCCGCGAA 62.848 66.667 18.71 1.50 45.86 4.70
55 56 3.607987 CATCGAGTCGCCGCGAAC 61.608 66.667 18.71 13.49 45.86 3.95
56 57 4.849329 ATCGAGTCGCCGCGAACC 62.849 66.667 18.71 11.08 45.86 3.62
59 60 3.479269 GAGTCGCCGCGAACCAAG 61.479 66.667 18.71 0.00 37.72 3.61
64 65 3.959975 GCCGCGAACCAAGCAACA 61.960 61.111 8.23 0.00 34.19 3.33
65 66 2.051345 CCGCGAACCAAGCAACAC 60.051 61.111 8.23 0.00 34.19 3.32
66 67 2.051345 CGCGAACCAAGCAACACC 60.051 61.111 0.00 0.00 34.19 4.16
67 68 2.542907 CGCGAACCAAGCAACACCT 61.543 57.895 0.00 0.00 34.19 4.00
68 69 1.733526 GCGAACCAAGCAACACCTT 59.266 52.632 0.00 0.00 34.19 3.50
69 70 0.317854 GCGAACCAAGCAACACCTTC 60.318 55.000 0.00 0.00 34.19 3.46
70 71 1.021202 CGAACCAAGCAACACCTTCA 58.979 50.000 0.00 0.00 0.00 3.02
71 72 1.403679 CGAACCAAGCAACACCTTCAA 59.596 47.619 0.00 0.00 0.00 2.69
72 73 2.541588 CGAACCAAGCAACACCTTCAAG 60.542 50.000 0.00 0.00 0.00 3.02
73 74 2.435372 ACCAAGCAACACCTTCAAGA 57.565 45.000 0.00 0.00 0.00 3.02
74 75 2.733956 ACCAAGCAACACCTTCAAGAA 58.266 42.857 0.00 0.00 0.00 2.52
75 76 2.689983 ACCAAGCAACACCTTCAAGAAG 59.310 45.455 2.83 2.83 38.14 2.85
85 86 1.063806 CTTCAAGAAGGACTGCGACG 58.936 55.000 1.86 0.00 34.87 5.12
86 87 0.671796 TTCAAGAAGGACTGCGACGA 59.328 50.000 0.00 0.00 0.00 4.20
87 88 0.039437 TCAAGAAGGACTGCGACGAC 60.039 55.000 0.00 0.00 0.00 4.34
88 89 1.081376 AAGAAGGACTGCGACGACG 60.081 57.895 2.12 2.12 42.93 5.12
89 90 1.512996 AAGAAGGACTGCGACGACGA 61.513 55.000 12.29 0.00 42.66 4.20
90 91 1.796749 GAAGGACTGCGACGACGAC 60.797 63.158 12.29 3.11 42.66 4.34
91 92 3.590443 AAGGACTGCGACGACGACG 62.590 63.158 15.13 15.13 42.66 5.12
92 93 4.081030 GGACTGCGACGACGACGA 62.081 66.667 22.94 7.63 42.66 4.20
93 94 2.864248 GACTGCGACGACGACGAC 60.864 66.667 22.94 14.05 42.66 4.34
99 100 4.738345 GACGACGACGACGCTGCT 62.738 66.667 18.98 0.00 43.96 4.24
111 112 3.064324 GCTGCTGCCCGGACAAAT 61.064 61.111 0.73 0.00 0.00 2.32
112 113 3.056313 GCTGCTGCCCGGACAAATC 62.056 63.158 0.73 0.00 0.00 2.17
113 114 2.361104 TGCTGCCCGGACAAATCC 60.361 61.111 0.73 0.00 42.28 3.01
114 115 2.044946 GCTGCCCGGACAAATCCT 60.045 61.111 0.73 0.00 43.73 3.24
115 116 1.223487 GCTGCCCGGACAAATCCTA 59.777 57.895 0.73 0.00 43.73 2.94
116 117 0.815615 GCTGCCCGGACAAATCCTAG 60.816 60.000 0.73 0.00 43.73 3.02
117 118 0.179045 CTGCCCGGACAAATCCTAGG 60.179 60.000 0.73 0.82 43.73 3.02
118 119 0.619255 TGCCCGGACAAATCCTAGGA 60.619 55.000 15.46 15.46 43.73 2.94
119 120 0.765510 GCCCGGACAAATCCTAGGAT 59.234 55.000 19.18 19.18 43.73 3.24
120 121 1.143073 GCCCGGACAAATCCTAGGATT 59.857 52.381 28.25 28.25 45.67 3.01
129 130 2.797285 ATCCTAGGATTTCTCCCGGT 57.203 50.000 19.18 0.00 43.21 5.28
130 131 3.917324 ATCCTAGGATTTCTCCCGGTA 57.083 47.619 19.18 0.00 43.21 4.02
131 132 2.954792 TCCTAGGATTTCTCCCGGTAC 58.045 52.381 7.62 0.00 43.21 3.34
132 133 2.245546 TCCTAGGATTTCTCCCGGTACA 59.754 50.000 7.62 0.00 43.21 2.90
133 134 3.116862 TCCTAGGATTTCTCCCGGTACAT 60.117 47.826 7.62 0.00 43.21 2.29
134 135 4.106825 TCCTAGGATTTCTCCCGGTACATA 59.893 45.833 7.62 0.00 43.21 2.29
135 136 4.463186 CCTAGGATTTCTCCCGGTACATAG 59.537 50.000 1.05 0.00 43.21 2.23
136 137 4.194678 AGGATTTCTCCCGGTACATAGA 57.805 45.455 0.00 0.00 43.21 1.98
137 138 4.153411 AGGATTTCTCCCGGTACATAGAG 58.847 47.826 0.00 0.00 43.21 2.43
138 139 3.258622 GGATTTCTCCCGGTACATAGAGG 59.741 52.174 0.00 0.00 35.28 3.69
139 140 2.376695 TTCTCCCGGTACATAGAGGG 57.623 55.000 0.00 0.00 45.10 4.30
143 144 0.680061 CCCGGTACATAGAGGGAAGC 59.320 60.000 0.00 0.00 46.64 3.86
144 145 0.314302 CCGGTACATAGAGGGAAGCG 59.686 60.000 0.00 0.00 0.00 4.68
145 146 0.314302 CGGTACATAGAGGGAAGCGG 59.686 60.000 0.00 0.00 0.00 5.52
146 147 0.680061 GGTACATAGAGGGAAGCGGG 59.320 60.000 0.00 0.00 0.00 6.13
147 148 0.033642 GTACATAGAGGGAAGCGGGC 59.966 60.000 0.00 0.00 0.00 6.13
148 149 1.461091 TACATAGAGGGAAGCGGGCG 61.461 60.000 0.00 0.00 0.00 6.13
149 150 2.123425 ATAGAGGGAAGCGGGCGA 60.123 61.111 0.00 0.00 0.00 5.54
150 151 2.203771 ATAGAGGGAAGCGGGCGAG 61.204 63.158 0.00 0.00 0.00 5.03
151 152 2.642183 ATAGAGGGAAGCGGGCGAGA 62.642 60.000 0.00 0.00 0.00 4.04
152 153 4.214327 GAGGGAAGCGGGCGAGAG 62.214 72.222 0.00 0.00 0.00 3.20
155 156 3.145551 GGAAGCGGGCGAGAGGTA 61.146 66.667 0.00 0.00 0.00 3.08
156 157 2.104530 GAAGCGGGCGAGAGGTAC 59.895 66.667 0.00 0.00 0.00 3.34
169 170 4.091939 GGTACTCCCGGCGCCTTT 62.092 66.667 26.68 6.10 0.00 3.11
170 171 2.510918 GTACTCCCGGCGCCTTTC 60.511 66.667 26.68 3.92 0.00 2.62
171 172 2.998480 TACTCCCGGCGCCTTTCA 60.998 61.111 26.68 4.34 0.00 2.69
172 173 2.585341 TACTCCCGGCGCCTTTCAA 61.585 57.895 26.68 2.13 0.00 2.69
173 174 2.515996 TACTCCCGGCGCCTTTCAAG 62.516 60.000 26.68 16.18 0.00 3.02
174 175 3.605749 CTCCCGGCGCCTTTCAAGA 62.606 63.158 26.68 10.52 0.00 3.02
175 176 2.671619 CCCGGCGCCTTTCAAGAA 60.672 61.111 26.68 0.00 0.00 2.52
176 177 2.690778 CCCGGCGCCTTTCAAGAAG 61.691 63.158 26.68 4.88 0.00 2.85
177 178 2.690778 CCGGCGCCTTTCAAGAAGG 61.691 63.158 26.68 11.11 40.39 3.46
178 179 1.966451 CGGCGCCTTTCAAGAAGGT 60.966 57.895 26.68 0.00 39.60 3.50
179 180 1.515521 CGGCGCCTTTCAAGAAGGTT 61.516 55.000 26.68 0.00 39.60 3.50
180 181 0.039165 GGCGCCTTTCAAGAAGGTTG 60.039 55.000 22.15 1.78 39.60 3.77
181 182 0.951558 GCGCCTTTCAAGAAGGTTGA 59.048 50.000 0.00 0.00 39.60 3.18
182 183 1.541588 GCGCCTTTCAAGAAGGTTGAT 59.458 47.619 0.00 0.00 39.60 2.57
183 184 2.669391 GCGCCTTTCAAGAAGGTTGATG 60.669 50.000 0.00 0.00 39.60 3.07
184 185 2.095059 CGCCTTTCAAGAAGGTTGATGG 60.095 50.000 6.67 0.00 39.60 3.51
185 186 2.353109 GCCTTTCAAGAAGGTTGATGGC 60.353 50.000 13.07 13.07 39.39 4.40
186 187 2.095059 CCTTTCAAGAAGGTTGATGGCG 60.095 50.000 0.00 0.00 32.78 5.69
187 188 0.881118 TTCAAGAAGGTTGATGGCGC 59.119 50.000 0.00 0.00 0.00 6.53
188 189 0.960364 TCAAGAAGGTTGATGGCGCC 60.960 55.000 22.73 22.73 0.00 6.53
189 190 1.678970 AAGAAGGTTGATGGCGCCC 60.679 57.895 26.77 10.34 0.00 6.13
190 191 3.508840 GAAGGTTGATGGCGCCCG 61.509 66.667 26.77 0.00 0.00 6.13
245 246 2.359011 GGATTTCGCCCAACCCCT 59.641 61.111 0.00 0.00 0.00 4.79
246 247 1.753078 GGATTTCGCCCAACCCCTC 60.753 63.158 0.00 0.00 0.00 4.30
247 248 1.001393 GATTTCGCCCAACCCCTCA 60.001 57.895 0.00 0.00 0.00 3.86
248 249 0.395724 GATTTCGCCCAACCCCTCAT 60.396 55.000 0.00 0.00 0.00 2.90
249 250 0.923358 ATTTCGCCCAACCCCTCATA 59.077 50.000 0.00 0.00 0.00 2.15
250 251 0.034863 TTTCGCCCAACCCCTCATAC 60.035 55.000 0.00 0.00 0.00 2.39
251 252 1.917336 TTCGCCCAACCCCTCATACC 61.917 60.000 0.00 0.00 0.00 2.73
252 253 2.601299 GCCCAACCCCTCATACCC 59.399 66.667 0.00 0.00 0.00 3.69
253 254 2.313427 GCCCAACCCCTCATACCCA 61.313 63.158 0.00 0.00 0.00 4.51
254 255 1.613061 CCCAACCCCTCATACCCAC 59.387 63.158 0.00 0.00 0.00 4.61
255 256 1.211567 CCCAACCCCTCATACCCACA 61.212 60.000 0.00 0.00 0.00 4.17
256 257 0.701731 CCAACCCCTCATACCCACAA 59.298 55.000 0.00 0.00 0.00 3.33
257 258 1.615919 CCAACCCCTCATACCCACAAC 60.616 57.143 0.00 0.00 0.00 3.32
258 259 0.702316 AACCCCTCATACCCACAACC 59.298 55.000 0.00 0.00 0.00 3.77
259 260 1.212250 ACCCCTCATACCCACAACCC 61.212 60.000 0.00 0.00 0.00 4.11
260 261 1.211567 CCCCTCATACCCACAACCCA 61.212 60.000 0.00 0.00 0.00 4.51
261 262 0.255890 CCCTCATACCCACAACCCAG 59.744 60.000 0.00 0.00 0.00 4.45
262 263 0.255890 CCTCATACCCACAACCCAGG 59.744 60.000 0.00 0.00 0.00 4.45
263 264 1.285280 CTCATACCCACAACCCAGGA 58.715 55.000 0.00 0.00 0.00 3.86
264 265 0.988832 TCATACCCACAACCCAGGAC 59.011 55.000 0.00 0.00 0.00 3.85
265 266 0.034477 CATACCCACAACCCAGGACC 60.034 60.000 0.00 0.00 0.00 4.46
266 267 0.476808 ATACCCACAACCCAGGACCA 60.477 55.000 0.00 0.00 0.00 4.02
267 268 0.698198 TACCCACAACCCAGGACCAA 60.698 55.000 0.00 0.00 0.00 3.67
268 269 1.530655 CCCACAACCCAGGACCAAC 60.531 63.158 0.00 0.00 0.00 3.77
269 270 1.530655 CCACAACCCAGGACCAACC 60.531 63.158 0.00 0.00 39.35 3.77
270 271 1.896660 CACAACCCAGGACCAACCG 60.897 63.158 0.00 0.00 44.74 4.44
271 272 2.282180 CAACCCAGGACCAACCGG 60.282 66.667 0.00 0.00 44.74 5.28
272 273 4.280019 AACCCAGGACCAACCGGC 62.280 66.667 0.00 0.00 44.74 6.13
302 303 4.596585 CCAACCGCCCACCAACCT 62.597 66.667 0.00 0.00 0.00 3.50
303 304 3.294493 CAACCGCCCACCAACCTG 61.294 66.667 0.00 0.00 0.00 4.00
312 313 4.514585 ACCAACCTGCGCCACCAA 62.515 61.111 4.18 0.00 0.00 3.67
313 314 3.222855 CCAACCTGCGCCACCAAA 61.223 61.111 4.18 0.00 0.00 3.28
314 315 2.336088 CAACCTGCGCCACCAAAG 59.664 61.111 4.18 0.00 0.00 2.77
315 316 2.123897 AACCTGCGCCACCAAAGT 60.124 55.556 4.18 0.00 0.00 2.66
316 317 2.193536 AACCTGCGCCACCAAAGTC 61.194 57.895 4.18 0.00 0.00 3.01
317 318 2.594303 CCTGCGCCACCAAAGTCA 60.594 61.111 4.18 0.00 0.00 3.41
318 319 2.639286 CTGCGCCACCAAAGTCAC 59.361 61.111 4.18 0.00 0.00 3.67
319 320 3.240606 CTGCGCCACCAAAGTCACG 62.241 63.158 4.18 0.00 0.00 4.35
320 321 2.970324 GCGCCACCAAAGTCACGA 60.970 61.111 0.00 0.00 0.00 4.35
321 322 2.954753 GCGCCACCAAAGTCACGAG 61.955 63.158 0.00 0.00 0.00 4.18
322 323 2.317609 CGCCACCAAAGTCACGAGG 61.318 63.158 0.00 0.00 0.00 4.63
323 324 1.070786 GCCACCAAAGTCACGAGGA 59.929 57.895 0.00 0.00 0.00 3.71
331 332 2.049433 GTCACGAGGACACCACCG 60.049 66.667 7.03 0.00 46.19 4.94
332 333 2.520020 TCACGAGGACACCACCGT 60.520 61.111 0.00 0.00 36.02 4.83
333 334 2.049433 CACGAGGACACCACCGTC 60.049 66.667 0.00 0.00 34.13 4.79
334 335 3.667282 ACGAGGACACCACCGTCG 61.667 66.667 0.00 0.00 36.73 5.12
335 336 3.359523 CGAGGACACCACCGTCGA 61.360 66.667 0.00 0.00 36.73 4.20
336 337 2.697761 CGAGGACACCACCGTCGAT 61.698 63.158 0.00 0.00 36.73 3.59
337 338 1.371337 CGAGGACACCACCGTCGATA 61.371 60.000 0.00 0.00 36.73 2.92
338 339 0.100146 GAGGACACCACCGTCGATAC 59.900 60.000 0.00 0.00 36.73 2.24
339 340 0.609957 AGGACACCACCGTCGATACA 60.610 55.000 0.00 0.00 36.73 2.29
340 341 0.179145 GGACACCACCGTCGATACAG 60.179 60.000 0.00 0.00 36.73 2.74
341 342 0.179145 GACACCACCGTCGATACAGG 60.179 60.000 0.00 0.00 0.00 4.00
342 343 0.896940 ACACCACCGTCGATACAGGT 60.897 55.000 0.00 0.00 39.12 4.00
345 346 3.689414 ACCGTCGATACAGGTGCA 58.311 55.556 0.00 0.00 36.81 4.57
346 347 1.511305 ACCGTCGATACAGGTGCAG 59.489 57.895 0.00 0.00 36.81 4.41
347 348 0.963856 ACCGTCGATACAGGTGCAGA 60.964 55.000 0.00 0.00 36.81 4.26
348 349 0.385751 CCGTCGATACAGGTGCAGAT 59.614 55.000 0.00 0.00 0.00 2.90
349 350 1.607148 CCGTCGATACAGGTGCAGATA 59.393 52.381 0.00 0.00 0.00 1.98
350 351 2.034179 CCGTCGATACAGGTGCAGATAA 59.966 50.000 0.00 0.00 0.00 1.75
351 352 3.305403 CCGTCGATACAGGTGCAGATAAT 60.305 47.826 0.00 0.00 0.00 1.28
352 353 3.914966 CGTCGATACAGGTGCAGATAATC 59.085 47.826 0.00 0.00 0.00 1.75
353 354 4.238514 GTCGATACAGGTGCAGATAATCC 58.761 47.826 0.00 0.00 0.00 3.01
354 355 4.021894 GTCGATACAGGTGCAGATAATCCT 60.022 45.833 0.00 0.00 0.00 3.24
357 358 2.267174 CAGGTGCAGATAATCCTGGG 57.733 55.000 10.25 0.00 42.38 4.45
358 359 1.770658 CAGGTGCAGATAATCCTGGGA 59.229 52.381 10.25 0.00 42.38 4.37
359 360 2.053244 AGGTGCAGATAATCCTGGGAG 58.947 52.381 0.00 0.00 34.82 4.30
360 361 1.544314 GGTGCAGATAATCCTGGGAGC 60.544 57.143 0.00 0.00 34.82 4.70
361 362 0.767375 TGCAGATAATCCTGGGAGCC 59.233 55.000 0.00 0.00 34.82 4.70
362 363 0.767375 GCAGATAATCCTGGGAGCCA 59.233 55.000 0.00 0.00 34.82 4.75
363 364 1.143684 GCAGATAATCCTGGGAGCCAA 59.856 52.381 0.00 0.00 34.82 4.52
364 365 2.423373 GCAGATAATCCTGGGAGCCAAA 60.423 50.000 0.00 0.00 34.82 3.28
365 366 3.902218 CAGATAATCCTGGGAGCCAAAA 58.098 45.455 0.00 0.00 30.80 2.44
366 367 3.633986 CAGATAATCCTGGGAGCCAAAAC 59.366 47.826 0.00 0.00 30.80 2.43
367 368 2.122783 TAATCCTGGGAGCCAAAACG 57.877 50.000 0.00 0.00 30.80 3.60
368 369 1.250840 AATCCTGGGAGCCAAAACGC 61.251 55.000 0.00 0.00 30.80 4.84
369 370 3.373565 CCTGGGAGCCAAAACGCC 61.374 66.667 0.00 0.00 30.80 5.68
370 371 2.282462 CTGGGAGCCAAAACGCCT 60.282 61.111 0.00 0.00 30.80 5.52
371 372 2.282180 TGGGAGCCAAAACGCCTC 60.282 61.111 0.00 0.00 0.00 4.70
372 373 2.282180 GGGAGCCAAAACGCCTCA 60.282 61.111 0.00 0.00 0.00 3.86
373 374 2.626780 GGGAGCCAAAACGCCTCAC 61.627 63.158 0.00 0.00 0.00 3.51
374 375 1.600916 GGAGCCAAAACGCCTCACT 60.601 57.895 0.00 0.00 0.00 3.41
375 376 1.578206 GGAGCCAAAACGCCTCACTC 61.578 60.000 0.00 0.00 0.00 3.51
376 377 0.603975 GAGCCAAAACGCCTCACTCT 60.604 55.000 0.00 0.00 0.00 3.24
377 378 0.179018 AGCCAAAACGCCTCACTCTT 60.179 50.000 0.00 0.00 0.00 2.85
378 379 0.238553 GCCAAAACGCCTCACTCTTC 59.761 55.000 0.00 0.00 0.00 2.87
379 380 0.512952 CCAAAACGCCTCACTCTTCG 59.487 55.000 0.00 0.00 0.00 3.79
380 381 0.512952 CAAAACGCCTCACTCTTCGG 59.487 55.000 0.00 0.00 0.00 4.30
381 382 0.391597 AAAACGCCTCACTCTTCGGA 59.608 50.000 0.00 0.00 0.00 4.55
382 383 0.319641 AAACGCCTCACTCTTCGGAC 60.320 55.000 0.00 0.00 0.00 4.79
383 384 1.179814 AACGCCTCACTCTTCGGACT 61.180 55.000 0.00 0.00 0.00 3.85
384 385 0.322277 ACGCCTCACTCTTCGGACTA 60.322 55.000 0.00 0.00 0.00 2.59
385 386 0.099082 CGCCTCACTCTTCGGACTAC 59.901 60.000 0.00 0.00 0.00 2.73
386 387 1.465794 GCCTCACTCTTCGGACTACT 58.534 55.000 0.00 0.00 0.00 2.57
387 388 2.641305 GCCTCACTCTTCGGACTACTA 58.359 52.381 0.00 0.00 0.00 1.82
388 389 2.355444 GCCTCACTCTTCGGACTACTAC 59.645 54.545 0.00 0.00 0.00 2.73
389 390 3.876341 CCTCACTCTTCGGACTACTACT 58.124 50.000 0.00 0.00 0.00 2.57
390 391 4.682859 GCCTCACTCTTCGGACTACTACTA 60.683 50.000 0.00 0.00 0.00 1.82
391 392 5.426504 CCTCACTCTTCGGACTACTACTAA 58.573 45.833 0.00 0.00 0.00 2.24
392 393 6.056884 CCTCACTCTTCGGACTACTACTAAT 58.943 44.000 0.00 0.00 0.00 1.73
393 394 6.203338 CCTCACTCTTCGGACTACTACTAATC 59.797 46.154 0.00 0.00 0.00 1.75
394 395 6.887013 TCACTCTTCGGACTACTACTAATCT 58.113 40.000 0.00 0.00 0.00 2.40
395 396 8.016301 TCACTCTTCGGACTACTACTAATCTA 57.984 38.462 0.00 0.00 0.00 1.98
396 397 7.925483 TCACTCTTCGGACTACTACTAATCTAC 59.075 40.741 0.00 0.00 0.00 2.59
397 398 7.927629 CACTCTTCGGACTACTACTAATCTACT 59.072 40.741 0.00 0.00 0.00 2.57
398 399 8.143835 ACTCTTCGGACTACTACTAATCTACTC 58.856 40.741 0.00 0.00 0.00 2.59
399 400 7.441017 TCTTCGGACTACTACTAATCTACTCC 58.559 42.308 0.00 0.00 0.00 3.85
400 401 6.737720 TCGGACTACTACTAATCTACTCCA 57.262 41.667 0.00 0.00 0.00 3.86
401 402 7.129457 TCGGACTACTACTAATCTACTCCAA 57.871 40.000 0.00 0.00 0.00 3.53
402 403 7.743749 TCGGACTACTACTAATCTACTCCAAT 58.256 38.462 0.00 0.00 0.00 3.16
403 404 7.877097 TCGGACTACTACTAATCTACTCCAATC 59.123 40.741 0.00 0.00 0.00 2.67
404 405 7.119553 CGGACTACTACTAATCTACTCCAATCC 59.880 44.444 0.00 0.00 0.00 3.01
405 406 7.943447 GGACTACTACTAATCTACTCCAATCCA 59.057 40.741 0.00 0.00 0.00 3.41
406 407 9.352191 GACTACTACTAATCTACTCCAATCCAA 57.648 37.037 0.00 0.00 0.00 3.53
407 408 9.134055 ACTACTACTAATCTACTCCAATCCAAC 57.866 37.037 0.00 0.00 0.00 3.77
408 409 7.040473 ACTACTAATCTACTCCAATCCAACG 57.960 40.000 0.00 0.00 0.00 4.10
409 410 4.694339 ACTAATCTACTCCAATCCAACGC 58.306 43.478 0.00 0.00 0.00 4.84
410 411 3.627395 AATCTACTCCAATCCAACGCA 57.373 42.857 0.00 0.00 0.00 5.24
411 412 3.627395 ATCTACTCCAATCCAACGCAA 57.373 42.857 0.00 0.00 0.00 4.85
412 413 3.627395 TCTACTCCAATCCAACGCAAT 57.373 42.857 0.00 0.00 0.00 3.56
413 414 3.950397 TCTACTCCAATCCAACGCAATT 58.050 40.909 0.00 0.00 0.00 2.32
414 415 4.331968 TCTACTCCAATCCAACGCAATTT 58.668 39.130 0.00 0.00 0.00 1.82
415 416 3.575965 ACTCCAATCCAACGCAATTTC 57.424 42.857 0.00 0.00 0.00 2.17
416 417 2.095263 ACTCCAATCCAACGCAATTTCG 60.095 45.455 0.00 0.00 0.00 3.46
417 418 2.155279 TCCAATCCAACGCAATTTCGA 58.845 42.857 4.06 0.00 0.00 3.71
418 419 2.095466 TCCAATCCAACGCAATTTCGAC 60.095 45.455 4.06 0.00 0.00 4.20
419 420 2.095263 CCAATCCAACGCAATTTCGACT 60.095 45.455 4.06 0.00 0.00 4.18
420 421 3.126171 CCAATCCAACGCAATTTCGACTA 59.874 43.478 4.06 0.00 0.00 2.59
421 422 4.088648 CAATCCAACGCAATTTCGACTAC 58.911 43.478 4.06 0.00 0.00 2.73
422 423 3.034721 TCCAACGCAATTTCGACTACT 57.965 42.857 4.06 0.00 0.00 2.57
423 424 4.177165 TCCAACGCAATTTCGACTACTA 57.823 40.909 4.06 0.00 0.00 1.82
424 425 4.171005 TCCAACGCAATTTCGACTACTAG 58.829 43.478 4.06 0.00 0.00 2.57
425 426 3.924686 CCAACGCAATTTCGACTACTAGT 59.075 43.478 4.06 0.00 0.00 2.57
426 427 4.031426 CCAACGCAATTTCGACTACTAGTC 59.969 45.833 4.06 6.18 41.71 2.59
427 428 4.430137 ACGCAATTTCGACTACTAGTCA 57.570 40.909 15.17 1.72 45.30 3.41
428 429 4.801891 ACGCAATTTCGACTACTAGTCAA 58.198 39.130 15.17 4.64 45.30 3.18
429 430 4.857588 ACGCAATTTCGACTACTAGTCAAG 59.142 41.667 15.17 0.00 45.30 3.02
430 431 4.259451 CGCAATTTCGACTACTAGTCAAGC 60.259 45.833 15.17 8.48 45.30 4.01
431 432 4.033014 GCAATTTCGACTACTAGTCAAGCC 59.967 45.833 15.17 0.00 45.30 4.35
432 433 3.863142 TTTCGACTACTAGTCAAGCCC 57.137 47.619 15.17 0.00 45.30 5.19
433 434 2.502142 TCGACTACTAGTCAAGCCCA 57.498 50.000 15.17 0.00 45.30 5.36
434 435 3.014304 TCGACTACTAGTCAAGCCCAT 57.986 47.619 15.17 0.00 45.30 4.00
435 436 2.950309 TCGACTACTAGTCAAGCCCATC 59.050 50.000 15.17 0.00 45.30 3.51
436 437 2.952978 CGACTACTAGTCAAGCCCATCT 59.047 50.000 15.17 0.00 45.30 2.90
437 438 3.003897 CGACTACTAGTCAAGCCCATCTC 59.996 52.174 15.17 0.00 45.30 2.75
438 439 2.952978 ACTACTAGTCAAGCCCATCTCG 59.047 50.000 0.00 0.00 0.00 4.04
439 440 1.853963 ACTAGTCAAGCCCATCTCGT 58.146 50.000 0.00 0.00 0.00 4.18
440 441 3.014304 ACTAGTCAAGCCCATCTCGTA 57.986 47.619 0.00 0.00 0.00 3.43
441 442 2.688958 ACTAGTCAAGCCCATCTCGTAC 59.311 50.000 0.00 0.00 0.00 3.67
442 443 1.853963 AGTCAAGCCCATCTCGTACT 58.146 50.000 0.00 0.00 0.00 2.73
443 444 3.014304 AGTCAAGCCCATCTCGTACTA 57.986 47.619 0.00 0.00 0.00 1.82
444 445 3.362706 AGTCAAGCCCATCTCGTACTAA 58.637 45.455 0.00 0.00 0.00 2.24
445 446 3.961408 AGTCAAGCCCATCTCGTACTAAT 59.039 43.478 0.00 0.00 0.00 1.73
446 447 4.038162 AGTCAAGCCCATCTCGTACTAATC 59.962 45.833 0.00 0.00 0.00 1.75
447 448 4.038162 GTCAAGCCCATCTCGTACTAATCT 59.962 45.833 0.00 0.00 0.00 2.40
448 449 5.241064 GTCAAGCCCATCTCGTACTAATCTA 59.759 44.000 0.00 0.00 0.00 1.98
449 450 5.241064 TCAAGCCCATCTCGTACTAATCTAC 59.759 44.000 0.00 0.00 0.00 2.59
450 451 4.988029 AGCCCATCTCGTACTAATCTACT 58.012 43.478 0.00 0.00 0.00 2.57
451 452 5.005094 AGCCCATCTCGTACTAATCTACTC 58.995 45.833 0.00 0.00 0.00 2.59
452 453 4.156373 GCCCATCTCGTACTAATCTACTCC 59.844 50.000 0.00 0.00 0.00 3.85
453 454 5.314529 CCCATCTCGTACTAATCTACTCCA 58.685 45.833 0.00 0.00 0.00 3.86
454 455 5.768662 CCCATCTCGTACTAATCTACTCCAA 59.231 44.000 0.00 0.00 0.00 3.53
455 456 6.434652 CCCATCTCGTACTAATCTACTCCAAT 59.565 42.308 0.00 0.00 0.00 3.16
456 457 7.362229 CCCATCTCGTACTAATCTACTCCAATC 60.362 44.444 0.00 0.00 0.00 2.67
457 458 7.362229 CCATCTCGTACTAATCTACTCCAATCC 60.362 44.444 0.00 0.00 0.00 3.01
458 459 6.598503 TCTCGTACTAATCTACTCCAATCCA 58.401 40.000 0.00 0.00 0.00 3.41
459 460 7.058525 TCTCGTACTAATCTACTCCAATCCAA 58.941 38.462 0.00 0.00 0.00 3.53
460 461 7.013083 TCTCGTACTAATCTACTCCAATCCAAC 59.987 40.741 0.00 0.00 0.00 3.77
461 462 6.040166 TCGTACTAATCTACTCCAATCCAACC 59.960 42.308 0.00 0.00 0.00 3.77
462 463 6.183360 CGTACTAATCTACTCCAATCCAACCA 60.183 42.308 0.00 0.00 0.00 3.67
463 464 6.636454 ACTAATCTACTCCAATCCAACCAA 57.364 37.500 0.00 0.00 0.00 3.67
464 465 7.027874 ACTAATCTACTCCAATCCAACCAAA 57.972 36.000 0.00 0.00 0.00 3.28
465 466 7.643123 ACTAATCTACTCCAATCCAACCAAAT 58.357 34.615 0.00 0.00 0.00 2.32
466 467 8.116026 ACTAATCTACTCCAATCCAACCAAATT 58.884 33.333 0.00 0.00 0.00 1.82
467 468 7.797121 AATCTACTCCAATCCAACCAAATTT 57.203 32.000 0.00 0.00 0.00 1.82
468 469 6.834168 TCTACTCCAATCCAACCAAATTTC 57.166 37.500 0.00 0.00 0.00 2.17
469 470 6.552008 TCTACTCCAATCCAACCAAATTTCT 58.448 36.000 0.00 0.00 0.00 2.52
470 471 5.473066 ACTCCAATCCAACCAAATTTCTG 57.527 39.130 0.00 0.00 0.00 3.02
471 472 4.248058 CTCCAATCCAACCAAATTTCTGC 58.752 43.478 0.00 0.00 0.00 4.26
472 473 3.903090 TCCAATCCAACCAAATTTCTGCT 59.097 39.130 0.00 0.00 0.00 4.24
473 474 5.083122 TCCAATCCAACCAAATTTCTGCTA 58.917 37.500 0.00 0.00 0.00 3.49
474 475 5.047377 TCCAATCCAACCAAATTTCTGCTAC 60.047 40.000 0.00 0.00 0.00 3.58
475 476 5.047092 CCAATCCAACCAAATTTCTGCTACT 60.047 40.000 0.00 0.00 0.00 2.57
476 477 6.152661 CCAATCCAACCAAATTTCTGCTACTA 59.847 38.462 0.00 0.00 0.00 1.82
477 478 7.253422 CAATCCAACCAAATTTCTGCTACTAG 58.747 38.462 0.00 0.00 0.00 2.57
478 479 5.876357 TCCAACCAAATTTCTGCTACTAGT 58.124 37.500 0.00 0.00 0.00 2.57
479 480 5.938125 TCCAACCAAATTTCTGCTACTAGTC 59.062 40.000 0.00 0.00 0.00 2.59
480 481 5.705441 CCAACCAAATTTCTGCTACTAGTCA 59.295 40.000 0.00 0.00 0.00 3.41
481 482 6.206634 CCAACCAAATTTCTGCTACTAGTCAA 59.793 38.462 0.00 0.00 0.00 3.18
482 483 7.301054 CAACCAAATTTCTGCTACTAGTCAAG 58.699 38.462 0.00 0.00 0.00 3.02
483 484 5.412904 ACCAAATTTCTGCTACTAGTCAAGC 59.587 40.000 10.22 10.22 39.25 4.01
484 485 5.163713 CCAAATTTCTGCTACTAGTCAAGCC 60.164 44.000 13.80 0.00 37.97 4.35
485 486 3.611766 TTTCTGCTACTAGTCAAGCCC 57.388 47.619 13.80 0.00 37.97 5.19
486 487 2.231716 TCTGCTACTAGTCAAGCCCA 57.768 50.000 13.80 0.00 37.97 5.36
487 488 2.536066 TCTGCTACTAGTCAAGCCCAA 58.464 47.619 13.80 0.00 37.97 4.12
488 489 2.903784 TCTGCTACTAGTCAAGCCCAAA 59.096 45.455 13.80 0.00 37.97 3.28
489 490 3.519510 TCTGCTACTAGTCAAGCCCAAAT 59.480 43.478 13.80 0.00 37.97 2.32
490 491 4.019321 TCTGCTACTAGTCAAGCCCAAATT 60.019 41.667 13.80 0.00 37.97 1.82
491 492 4.261801 TGCTACTAGTCAAGCCCAAATTC 58.738 43.478 13.80 0.00 37.97 2.17
492 493 3.628032 GCTACTAGTCAAGCCCAAATTCC 59.372 47.826 0.00 0.00 32.40 3.01
493 494 4.626529 GCTACTAGTCAAGCCCAAATTCCT 60.627 45.833 0.00 0.00 32.40 3.36
494 495 4.388577 ACTAGTCAAGCCCAAATTCCTT 57.611 40.909 0.00 0.00 0.00 3.36
495 496 4.082125 ACTAGTCAAGCCCAAATTCCTTG 58.918 43.478 0.00 0.00 37.80 3.61
496 497 3.243359 AGTCAAGCCCAAATTCCTTGA 57.757 42.857 0.00 0.00 41.72 3.02
498 499 2.956132 TCAAGCCCAAATTCCTTGACA 58.044 42.857 0.00 0.00 39.80 3.58
499 500 2.627699 TCAAGCCCAAATTCCTTGACAC 59.372 45.455 0.00 0.00 39.80 3.67
500 501 2.629617 CAAGCCCAAATTCCTTGACACT 59.370 45.455 0.00 0.00 38.52 3.55
501 502 2.519013 AGCCCAAATTCCTTGACACTC 58.481 47.619 0.00 0.00 37.17 3.51
502 503 1.200020 GCCCAAATTCCTTGACACTCG 59.800 52.381 0.00 0.00 37.17 4.18
503 504 1.812571 CCCAAATTCCTTGACACTCGG 59.187 52.381 0.00 0.00 37.17 4.63
504 505 1.200020 CCAAATTCCTTGACACTCGGC 59.800 52.381 0.00 0.00 37.17 5.54
509 510 0.601558 TCCTTGACACTCGGCTGTAC 59.398 55.000 0.00 0.00 0.00 2.90
512 513 2.061773 CTTGACACTCGGCTGTACTTG 58.938 52.381 0.00 0.00 0.00 3.16
525 526 4.631813 GGCTGTACTTGTTCACTAAGGATG 59.368 45.833 0.00 0.00 0.00 3.51
526 527 5.238583 GCTGTACTTGTTCACTAAGGATGT 58.761 41.667 0.00 0.00 0.00 3.06
529 530 7.004555 TGTACTTGTTCACTAAGGATGTCAT 57.995 36.000 0.00 0.00 0.00 3.06
531 532 5.248640 ACTTGTTCACTAAGGATGTCATGG 58.751 41.667 0.00 0.00 0.00 3.66
548 549 4.006989 TCATGGGTGTCATTTCTTTACCG 58.993 43.478 0.00 0.00 32.92 4.02
572 573 7.710907 CCGAACTTCATATGAATAGAAAGGTCA 59.289 37.037 18.26 0.00 33.01 4.02
672 673 2.327568 GTGGAACCATGTCGCATTTTG 58.672 47.619 0.00 0.00 0.00 2.44
703 810 7.133483 ACTACTAATCTACTCCAATCCAACCT 58.867 38.462 0.00 0.00 0.00 3.50
721 828 9.939424 ATCCAACCTAATTTCTACTACTAGTCT 57.061 33.333 0.00 0.00 0.00 3.24
890 1023 3.199891 GGATAACCACCACGCGCC 61.200 66.667 5.73 0.00 35.97 6.53
891 1024 3.199891 GATAACCACCACGCGCCC 61.200 66.667 5.73 0.00 0.00 6.13
919 1052 0.753262 ATACAGGTCGGCATCCAGTC 59.247 55.000 0.00 0.00 0.00 3.51
920 1053 0.613572 TACAGGTCGGCATCCAGTCA 60.614 55.000 0.00 0.00 0.00 3.41
921 1054 1.448540 CAGGTCGGCATCCAGTCAC 60.449 63.158 0.00 0.00 0.00 3.67
922 1055 1.913262 AGGTCGGCATCCAGTCACA 60.913 57.895 0.00 0.00 0.00 3.58
923 1056 1.741770 GGTCGGCATCCAGTCACAC 60.742 63.158 0.00 0.00 0.00 3.82
924 1057 1.293498 GTCGGCATCCAGTCACACT 59.707 57.895 0.00 0.00 0.00 3.55
925 1058 0.737715 GTCGGCATCCAGTCACACTC 60.738 60.000 0.00 0.00 0.00 3.51
926 1059 1.184970 TCGGCATCCAGTCACACTCA 61.185 55.000 0.00 0.00 0.00 3.41
927 1060 1.016130 CGGCATCCAGTCACACTCAC 61.016 60.000 0.00 0.00 0.00 3.51
928 1061 0.035317 GGCATCCAGTCACACTCACA 59.965 55.000 0.00 0.00 0.00 3.58
967 1111 1.077357 GGCCTGAGACGGAGAGAGA 60.077 63.158 0.00 0.00 0.00 3.10
968 1112 1.101049 GGCCTGAGACGGAGAGAGAG 61.101 65.000 0.00 0.00 0.00 3.20
1062 1216 2.060383 CGCCATCCTGTCCCTCTCA 61.060 63.158 0.00 0.00 0.00 3.27
1063 1217 1.828768 GCCATCCTGTCCCTCTCAG 59.171 63.158 0.00 0.00 0.00 3.35
1065 1219 1.577736 CCATCCTGTCCCTCTCAGTT 58.422 55.000 0.00 0.00 0.00 3.16
1068 1222 0.178921 TCCTGTCCCTCTCAGTTGCT 60.179 55.000 0.00 0.00 0.00 3.91
1434 1588 2.742372 CACGGCGGGGAAAGTCAG 60.742 66.667 13.24 0.00 0.00 3.51
1554 1711 1.065199 GGCATCTCCAGGAACATCACA 60.065 52.381 0.00 0.00 34.01 3.58
1756 1913 4.078516 CCAACCCCGACGAGACCC 62.079 72.222 0.00 0.00 0.00 4.46
2271 2458 0.892358 AGTACTCGGAGGTCGTGCAA 60.892 55.000 10.23 0.00 40.32 4.08
2351 2538 0.662619 CTCTACAGCTCTGCCTCGAG 59.337 60.000 5.13 5.13 0.00 4.04
2360 2547 2.095053 GCTCTGCCTCGAGTGAATTTTC 59.905 50.000 12.31 0.00 33.55 2.29
2369 2616 3.056107 TCGAGTGAATTTTCGTCCCAGAT 60.056 43.478 7.51 0.00 37.99 2.90
2390 2638 7.315142 CAGATTTTCCCATTTCAATTCGAGAA 58.685 34.615 0.00 0.00 0.00 2.87
2391 2639 7.274250 CAGATTTTCCCATTTCAATTCGAGAAC 59.726 37.037 0.00 0.00 0.00 3.01
2412 2660 2.096496 CACCATGTCGATTTCTTCAGCC 59.904 50.000 0.00 0.00 0.00 4.85
2446 3468 2.434185 TCGTGCTTGTGATCGCCC 60.434 61.111 3.31 0.00 0.00 6.13
2478 3500 1.374758 CTCCGGCGTGCTTCTTCTT 60.375 57.895 6.01 0.00 0.00 2.52
2579 3622 1.196127 GGCCACGAAACTTAAACTCCG 59.804 52.381 0.00 0.00 0.00 4.63
2601 3644 0.618981 GGGACGATCAGGGGTTTTCT 59.381 55.000 0.00 0.00 0.00 2.52
2654 3697 1.291877 CTTGACCTTCGGCTGTTCGG 61.292 60.000 0.00 0.00 0.00 4.30
2788 3851 8.841822 GTTATAGATCGATCACAACTTGTATCG 58.158 37.037 26.47 18.17 36.33 2.92
3080 4241 1.483827 TCTGCTCATTCCGCTCTGATT 59.516 47.619 0.00 0.00 0.00 2.57
3084 4245 3.323115 TGCTCATTCCGCTCTGATTCTAT 59.677 43.478 0.00 0.00 0.00 1.98
3196 4394 6.339730 TCAATGACAATGTATGGATTTTGGC 58.660 36.000 0.00 0.00 0.00 4.52
3479 4729 8.198109 CCTATATCCCAACTCATCGTTTATAGG 58.802 40.741 0.00 0.00 38.13 2.57
3488 4742 9.277565 CAACTCATCGTTTATAGGACAATTTTG 57.722 33.333 0.00 0.00 32.27 2.44
3544 4798 1.026182 GTGAGATGGCGGTGCATCAA 61.026 55.000 0.00 0.00 0.00 2.57
3602 4856 6.260936 GTGTGTTCTCCATGAAATCCGATATT 59.739 38.462 0.00 0.00 36.30 1.28
3653 4907 1.734465 GTCACTGGCAAGAAGAATCGG 59.266 52.381 0.00 0.00 0.00 4.18
3706 4960 4.038763 CCTCCTCGGTTATGTAATGCACTA 59.961 45.833 0.00 0.00 0.00 2.74
3725 4979 5.660391 CACTACACGAGCATGATTAATTCG 58.340 41.667 0.00 5.21 37.31 3.34
3744 5013 4.514545 TCGCACGTGATTCATATTTGAC 57.485 40.909 22.23 0.00 0.00 3.18
3745 5014 3.000177 TCGCACGTGATTCATATTTGACG 60.000 43.478 22.23 8.39 0.00 4.35
3787 5063 5.726397 CAATCATTGATCTTTTTCCAGGCA 58.274 37.500 0.00 0.00 0.00 4.75
3823 5099 0.947244 AAGGCAGAAGCGTTGAACTG 59.053 50.000 0.00 0.00 46.15 3.16
3839 5115 0.463295 ACTGCTTGATGAGGCGATGG 60.463 55.000 0.00 0.00 0.00 3.51
3938 5214 4.517285 GAATAGGCCACTGATGTCTTCAA 58.483 43.478 5.01 0.00 32.78 2.69
3973 5249 2.034879 CACCGAGAATGCCACGCTT 61.035 57.895 0.00 0.00 0.00 4.68
4062 5338 2.150397 AGTGAGTTGACCGTAACTGC 57.850 50.000 0.00 0.00 40.78 4.40
4084 5360 2.726821 ACGGATACTCGGTAGTTTGGA 58.273 47.619 0.00 0.00 37.15 3.53
4105 5381 2.820178 TGGACTAGTTGAGATGGAGCA 58.180 47.619 0.00 0.00 0.00 4.26
4162 5438 9.740239 CAAATCTAATTGTGAATTTCCGATCAT 57.260 29.630 0.00 0.00 32.38 2.45
4305 5601 2.266055 GCTTACGCCAGCTGACCT 59.734 61.111 17.39 0.00 36.79 3.85
4332 5628 9.855021 GTTGCATTAATAAACCAGAGTACATTT 57.145 29.630 0.00 0.00 0.00 2.32
4377 5673 4.948004 GGGGTAGGGTAAGAAAGTGAAATG 59.052 45.833 0.00 0.00 0.00 2.32
4490 5795 1.531423 CCATCAGCAGCAGAACAAGT 58.469 50.000 0.00 0.00 0.00 3.16
4515 5820 2.329267 AGGTGGATCAGTTGAGTGTCA 58.671 47.619 0.00 0.00 0.00 3.58
4518 5823 2.926200 GTGGATCAGTTGAGTGTCATCG 59.074 50.000 0.00 0.00 0.00 3.84
4583 5889 1.361668 GCATGATGTTCGTGGAGCGT 61.362 55.000 0.00 0.00 42.13 5.07
4602 5908 6.072893 GGAGCGTACTTTATTTTGAAGGTCAA 60.073 38.462 0.00 0.00 34.03 3.18
4622 5928 4.019950 TCAATGCCTCAAAGATGACTCAGA 60.020 41.667 0.00 0.00 0.00 3.27
4626 5932 3.870419 GCCTCAAAGATGACTCAGATCAC 59.130 47.826 0.00 0.00 0.00 3.06
4642 5948 4.492303 ACGGGGGATCATCGGGGT 62.492 66.667 0.00 0.00 0.00 4.95
4671 5977 3.321497 GACAATTCTTCGCACAGAGAGT 58.679 45.455 0.00 0.00 0.00 3.24
4687 5994 6.091849 CACAGAGAGTGTTGATTTGATAGTGG 59.908 42.308 0.00 0.00 43.40 4.00
4804 6114 2.062636 AGGAGGGCTCAAACCTTGTAA 58.937 47.619 0.00 0.00 38.79 2.41
4811 6121 4.566907 GGGCTCAAACCTTGTAATGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
4910 6220 7.235606 AGCTTGATATAAACCTCACCAGCTATA 59.764 37.037 0.00 0.00 35.09 1.31
5003 9663 6.569610 GCAATCATTTTGGTCGTTTTCTAGGA 60.570 38.462 0.00 0.00 0.00 2.94
5007 9667 4.759516 TTTGGTCGTTTTCTAGGAATGC 57.240 40.909 0.00 0.00 0.00 3.56
5060 9720 3.246880 GGAGGTGGGGTTGGACGT 61.247 66.667 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.525077 GATATTTCCGGTGGGCGCA 60.525 57.895 10.83 0.00 0.00 6.09
5 6 1.147376 TGGATATTTCCGGTGGGCG 59.853 57.895 0.00 0.00 45.89 6.13
6 7 0.822121 GGTGGATATTTCCGGTGGGC 60.822 60.000 0.00 0.00 45.89 5.36
7 8 0.548989 TGGTGGATATTTCCGGTGGG 59.451 55.000 0.00 0.00 45.89 4.61
8 9 1.675552 GTGGTGGATATTTCCGGTGG 58.324 55.000 0.00 0.00 45.89 4.61
9 10 1.295792 CGTGGTGGATATTTCCGGTG 58.704 55.000 0.00 0.00 45.89 4.94
10 11 0.463116 GCGTGGTGGATATTTCCGGT 60.463 55.000 0.00 0.00 45.89 5.28
11 12 0.179056 AGCGTGGTGGATATTTCCGG 60.179 55.000 0.00 0.00 45.89 5.14
12 13 1.217882 GAGCGTGGTGGATATTTCCG 58.782 55.000 0.00 0.00 45.89 4.30
13 14 1.134220 TGGAGCGTGGTGGATATTTCC 60.134 52.381 0.00 0.00 42.94 3.13
14 15 2.325583 TGGAGCGTGGTGGATATTTC 57.674 50.000 0.00 0.00 0.00 2.17
15 16 2.799126 TTGGAGCGTGGTGGATATTT 57.201 45.000 0.00 0.00 0.00 1.40
16 17 2.575532 CATTGGAGCGTGGTGGATATT 58.424 47.619 0.00 0.00 0.00 1.28
17 18 1.815408 GCATTGGAGCGTGGTGGATAT 60.815 52.381 0.00 0.00 0.00 1.63
18 19 0.463654 GCATTGGAGCGTGGTGGATA 60.464 55.000 0.00 0.00 0.00 2.59
19 20 1.750399 GCATTGGAGCGTGGTGGAT 60.750 57.895 0.00 0.00 0.00 3.41
20 21 2.359850 GCATTGGAGCGTGGTGGA 60.360 61.111 0.00 0.00 0.00 4.02
21 22 3.443045 GGCATTGGAGCGTGGTGG 61.443 66.667 0.00 0.00 34.64 4.61
22 23 1.996786 GATGGCATTGGAGCGTGGTG 61.997 60.000 0.00 0.00 34.64 4.17
23 24 1.750399 GATGGCATTGGAGCGTGGT 60.750 57.895 0.00 0.00 34.64 4.16
24 25 2.827051 CGATGGCATTGGAGCGTGG 61.827 63.158 6.84 0.00 34.64 4.94
25 26 1.769098 CTCGATGGCATTGGAGCGTG 61.769 60.000 14.66 4.27 34.64 5.34
26 27 1.522355 CTCGATGGCATTGGAGCGT 60.522 57.895 14.66 0.00 34.64 5.07
27 28 1.493950 GACTCGATGGCATTGGAGCG 61.494 60.000 22.03 12.67 34.64 5.03
28 29 1.493950 CGACTCGATGGCATTGGAGC 61.494 60.000 22.03 15.90 0.00 4.70
29 30 1.493950 GCGACTCGATGGCATTGGAG 61.494 60.000 21.05 21.05 31.07 3.86
30 31 1.521457 GCGACTCGATGGCATTGGA 60.521 57.895 14.66 8.26 31.07 3.53
31 32 2.537560 GGCGACTCGATGGCATTGG 61.538 63.158 14.66 8.05 32.68 3.16
32 33 2.874694 CGGCGACTCGATGGCATTG 61.875 63.158 8.51 8.51 32.68 2.82
33 34 2.586079 CGGCGACTCGATGGCATT 60.586 61.111 0.00 0.00 32.68 3.56
37 38 4.847516 TTCGCGGCGACTCGATGG 62.848 66.667 26.40 0.00 34.89 3.51
38 39 3.607987 GTTCGCGGCGACTCGATG 61.608 66.667 26.40 0.00 34.89 3.84
39 40 4.849329 GGTTCGCGGCGACTCGAT 62.849 66.667 26.40 0.00 34.89 3.59
42 43 3.479269 CTTGGTTCGCGGCGACTC 61.479 66.667 26.40 19.76 34.89 3.36
47 48 3.959975 TGTTGCTTGGTTCGCGGC 61.960 61.111 6.13 0.00 0.00 6.53
48 49 2.051345 GTGTTGCTTGGTTCGCGG 60.051 61.111 6.13 0.00 0.00 6.46
49 50 2.051345 GGTGTTGCTTGGTTCGCG 60.051 61.111 0.00 0.00 0.00 5.87
50 51 0.317854 GAAGGTGTTGCTTGGTTCGC 60.318 55.000 0.00 0.00 0.00 4.70
51 52 1.021202 TGAAGGTGTTGCTTGGTTCG 58.979 50.000 0.00 0.00 0.00 3.95
52 53 2.687935 TCTTGAAGGTGTTGCTTGGTTC 59.312 45.455 0.00 0.00 0.00 3.62
53 54 2.733956 TCTTGAAGGTGTTGCTTGGTT 58.266 42.857 0.00 0.00 0.00 3.67
54 55 2.435372 TCTTGAAGGTGTTGCTTGGT 57.565 45.000 0.00 0.00 0.00 3.67
55 56 2.035066 CCTTCTTGAAGGTGTTGCTTGG 59.965 50.000 18.52 0.00 35.22 3.61
56 57 2.951642 TCCTTCTTGAAGGTGTTGCTTG 59.048 45.455 23.78 1.45 40.81 4.01
57 58 2.952310 GTCCTTCTTGAAGGTGTTGCTT 59.048 45.455 23.78 0.00 40.81 3.91
58 59 2.173569 AGTCCTTCTTGAAGGTGTTGCT 59.826 45.455 23.78 14.33 40.81 3.91
59 60 2.291741 CAGTCCTTCTTGAAGGTGTTGC 59.708 50.000 23.78 12.83 40.81 4.17
60 61 2.291741 GCAGTCCTTCTTGAAGGTGTTG 59.708 50.000 23.78 20.11 40.81 3.33
61 62 2.576615 GCAGTCCTTCTTGAAGGTGTT 58.423 47.619 23.78 11.44 40.81 3.32
62 63 1.541233 CGCAGTCCTTCTTGAAGGTGT 60.541 52.381 23.78 12.77 40.81 4.16
63 64 1.151668 CGCAGTCCTTCTTGAAGGTG 58.848 55.000 23.78 18.02 40.81 4.00
64 65 1.048601 TCGCAGTCCTTCTTGAAGGT 58.951 50.000 23.78 7.77 40.81 3.50
65 66 1.433534 GTCGCAGTCCTTCTTGAAGG 58.566 55.000 20.21 20.21 41.35 3.46
66 67 1.063806 CGTCGCAGTCCTTCTTGAAG 58.936 55.000 3.55 3.55 0.00 3.02
67 68 0.671796 TCGTCGCAGTCCTTCTTGAA 59.328 50.000 0.00 0.00 0.00 2.69
68 69 0.039437 GTCGTCGCAGTCCTTCTTGA 60.039 55.000 0.00 0.00 0.00 3.02
69 70 1.337817 CGTCGTCGCAGTCCTTCTTG 61.338 60.000 0.00 0.00 0.00 3.02
70 71 1.081376 CGTCGTCGCAGTCCTTCTT 60.081 57.895 0.00 0.00 0.00 2.52
71 72 1.964891 TCGTCGTCGCAGTCCTTCT 60.965 57.895 0.00 0.00 36.96 2.85
72 73 1.796749 GTCGTCGTCGCAGTCCTTC 60.797 63.158 0.00 0.00 36.96 3.46
73 74 2.254651 GTCGTCGTCGCAGTCCTT 59.745 61.111 0.00 0.00 36.96 3.36
74 75 4.086178 CGTCGTCGTCGCAGTCCT 62.086 66.667 0.00 0.00 36.96 3.85
75 76 4.081030 TCGTCGTCGTCGCAGTCC 62.081 66.667 7.01 0.00 38.33 3.85
76 77 2.864248 GTCGTCGTCGTCGCAGTC 60.864 66.667 7.01 0.00 38.33 3.51
77 78 4.714555 CGTCGTCGTCGTCGCAGT 62.715 66.667 8.64 0.00 40.72 4.40
82 83 4.738345 AGCAGCGTCGTCGTCGTC 62.738 66.667 13.09 6.07 39.49 4.20
94 95 3.056313 GATTTGTCCGGGCAGCAGC 62.056 63.158 9.61 0.00 41.10 5.25
95 96 2.409870 GGATTTGTCCGGGCAGCAG 61.410 63.158 9.61 0.00 0.00 4.24
96 97 1.558167 TAGGATTTGTCCGGGCAGCA 61.558 55.000 9.61 0.00 34.28 4.41
97 98 0.815615 CTAGGATTTGTCCGGGCAGC 60.816 60.000 9.61 2.60 34.28 5.25
98 99 0.179045 CCTAGGATTTGTCCGGGCAG 60.179 60.000 9.61 0.00 34.28 4.85
99 100 0.619255 TCCTAGGATTTGTCCGGGCA 60.619 55.000 3.51 3.51 34.28 5.36
100 101 0.765510 ATCCTAGGATTTGTCCGGGC 59.234 55.000 19.18 0.00 34.28 6.13
109 110 3.061909 ACCGGGAGAAATCCTAGGATT 57.938 47.619 28.25 28.25 45.67 3.01
110 111 2.797285 ACCGGGAGAAATCCTAGGAT 57.203 50.000 19.18 19.18 36.23 3.24
111 112 2.245546 TGTACCGGGAGAAATCCTAGGA 59.754 50.000 15.46 15.46 33.85 2.94
112 113 2.674420 TGTACCGGGAGAAATCCTAGG 58.326 52.381 6.32 0.82 35.07 3.02
113 114 5.322754 TCTATGTACCGGGAGAAATCCTAG 58.677 45.833 6.32 0.00 0.00 3.02
114 115 5.322754 CTCTATGTACCGGGAGAAATCCTA 58.677 45.833 6.32 0.00 0.00 2.94
115 116 4.153411 CTCTATGTACCGGGAGAAATCCT 58.847 47.826 6.32 0.00 0.00 3.24
116 117 3.258622 CCTCTATGTACCGGGAGAAATCC 59.741 52.174 6.32 0.00 0.00 3.01
117 118 3.258622 CCCTCTATGTACCGGGAGAAATC 59.741 52.174 6.32 0.00 39.08 2.17
118 119 3.116862 TCCCTCTATGTACCGGGAGAAAT 60.117 47.826 6.32 0.00 40.69 2.17
119 120 2.245546 TCCCTCTATGTACCGGGAGAAA 59.754 50.000 6.32 0.00 40.69 2.52
120 121 1.854939 TCCCTCTATGTACCGGGAGAA 59.145 52.381 6.32 0.00 40.69 2.87
121 122 1.526315 TCCCTCTATGTACCGGGAGA 58.474 55.000 6.32 0.00 40.69 3.71
122 123 2.240279 CTTCCCTCTATGTACCGGGAG 58.760 57.143 6.32 0.58 45.83 4.30
123 124 1.756690 GCTTCCCTCTATGTACCGGGA 60.757 57.143 6.32 0.00 43.75 5.14
124 125 0.680061 GCTTCCCTCTATGTACCGGG 59.320 60.000 6.32 0.00 38.07 5.73
125 126 0.314302 CGCTTCCCTCTATGTACCGG 59.686 60.000 0.00 0.00 0.00 5.28
126 127 0.314302 CCGCTTCCCTCTATGTACCG 59.686 60.000 0.00 0.00 0.00 4.02
127 128 0.680061 CCCGCTTCCCTCTATGTACC 59.320 60.000 0.00 0.00 0.00 3.34
128 129 0.033642 GCCCGCTTCCCTCTATGTAC 59.966 60.000 0.00 0.00 0.00 2.90
129 130 1.461091 CGCCCGCTTCCCTCTATGTA 61.461 60.000 0.00 0.00 0.00 2.29
130 131 2.797278 CGCCCGCTTCCCTCTATGT 61.797 63.158 0.00 0.00 0.00 2.29
131 132 2.029666 CGCCCGCTTCCCTCTATG 59.970 66.667 0.00 0.00 0.00 2.23
132 133 2.123425 TCGCCCGCTTCCCTCTAT 60.123 61.111 0.00 0.00 0.00 1.98
133 134 2.833582 CTCGCCCGCTTCCCTCTA 60.834 66.667 0.00 0.00 0.00 2.43
134 135 4.761058 TCTCGCCCGCTTCCCTCT 62.761 66.667 0.00 0.00 0.00 3.69
135 136 4.214327 CTCTCGCCCGCTTCCCTC 62.214 72.222 0.00 0.00 0.00 4.30
138 139 3.145551 TACCTCTCGCCCGCTTCC 61.146 66.667 0.00 0.00 0.00 3.46
139 140 2.104530 GTACCTCTCGCCCGCTTC 59.895 66.667 0.00 0.00 0.00 3.86
140 141 2.362632 AGTACCTCTCGCCCGCTT 60.363 61.111 0.00 0.00 0.00 4.68
141 142 2.829458 GAGTACCTCTCGCCCGCT 60.829 66.667 0.00 0.00 33.25 5.52
142 143 3.902086 GGAGTACCTCTCGCCCGC 61.902 72.222 0.00 0.00 43.60 6.13
143 144 3.217743 GGGAGTACCTCTCGCCCG 61.218 72.222 0.00 0.00 46.23 6.13
148 149 3.902086 GCGCCGGGAGTACCTCTC 61.902 72.222 2.18 0.00 42.07 3.20
152 153 4.091939 AAAGGCGCCGGGAGTACC 62.092 66.667 23.20 0.00 0.00 3.34
153 154 2.510918 GAAAGGCGCCGGGAGTAC 60.511 66.667 23.20 5.93 0.00 2.73
154 155 2.515996 CTTGAAAGGCGCCGGGAGTA 62.516 60.000 23.20 5.37 0.00 2.59
155 156 3.901797 CTTGAAAGGCGCCGGGAGT 62.902 63.158 23.20 5.32 0.00 3.85
156 157 3.127533 CTTGAAAGGCGCCGGGAG 61.128 66.667 23.20 12.13 0.00 4.30
157 158 3.185299 TTCTTGAAAGGCGCCGGGA 62.185 57.895 23.20 11.08 0.00 5.14
158 159 2.671619 TTCTTGAAAGGCGCCGGG 60.672 61.111 23.20 8.80 0.00 5.73
159 160 2.690778 CCTTCTTGAAAGGCGCCGG 61.691 63.158 23.20 9.01 0.00 6.13
160 161 1.515521 AACCTTCTTGAAAGGCGCCG 61.516 55.000 23.20 5.45 41.10 6.46
161 162 0.039165 CAACCTTCTTGAAAGGCGCC 60.039 55.000 21.89 21.89 41.10 6.53
162 163 0.951558 TCAACCTTCTTGAAAGGCGC 59.048 50.000 0.00 0.00 41.10 6.53
163 164 2.095059 CCATCAACCTTCTTGAAAGGCG 60.095 50.000 3.75 0.00 41.10 5.52
164 165 2.353109 GCCATCAACCTTCTTGAAAGGC 60.353 50.000 11.70 11.70 42.29 4.35
165 166 2.095059 CGCCATCAACCTTCTTGAAAGG 60.095 50.000 2.29 2.29 43.05 3.11
166 167 2.669391 GCGCCATCAACCTTCTTGAAAG 60.669 50.000 0.00 0.00 31.55 2.62
167 168 1.269448 GCGCCATCAACCTTCTTGAAA 59.731 47.619 0.00 0.00 31.55 2.69
168 169 0.881118 GCGCCATCAACCTTCTTGAA 59.119 50.000 0.00 0.00 31.55 2.69
169 170 0.960364 GGCGCCATCAACCTTCTTGA 60.960 55.000 24.80 0.00 0.00 3.02
170 171 1.508088 GGCGCCATCAACCTTCTTG 59.492 57.895 24.80 0.00 0.00 3.02
171 172 1.678970 GGGCGCCATCAACCTTCTT 60.679 57.895 30.85 0.00 0.00 2.52
172 173 2.044946 GGGCGCCATCAACCTTCT 60.045 61.111 30.85 0.00 0.00 2.85
173 174 3.508840 CGGGCGCCATCAACCTTC 61.509 66.667 30.85 6.07 0.00 3.46
221 222 2.109181 GGGCGAAATCCCTCTCGG 59.891 66.667 0.00 0.00 43.13 4.63
222 223 1.090052 GTTGGGCGAAATCCCTCTCG 61.090 60.000 0.12 0.00 46.67 4.04
223 224 0.748367 GGTTGGGCGAAATCCCTCTC 60.748 60.000 0.12 0.00 46.67 3.20
224 225 1.303282 GGTTGGGCGAAATCCCTCT 59.697 57.895 0.12 0.00 46.67 3.69
225 226 1.753078 GGGTTGGGCGAAATCCCTC 60.753 63.158 1.29 0.00 46.67 4.30
226 227 2.359011 GGGTTGGGCGAAATCCCT 59.641 61.111 1.29 0.00 46.67 4.20
227 228 2.758327 GGGGTTGGGCGAAATCCC 60.758 66.667 4.30 4.30 46.73 3.85
228 229 1.753078 GAGGGGTTGGGCGAAATCC 60.753 63.158 0.00 0.00 0.00 3.01
229 230 0.395724 ATGAGGGGTTGGGCGAAATC 60.396 55.000 0.00 0.00 0.00 2.17
230 231 0.923358 TATGAGGGGTTGGGCGAAAT 59.077 50.000 0.00 0.00 0.00 2.17
231 232 0.034863 GTATGAGGGGTTGGGCGAAA 60.035 55.000 0.00 0.00 0.00 3.46
232 233 1.605453 GTATGAGGGGTTGGGCGAA 59.395 57.895 0.00 0.00 0.00 4.70
233 234 2.372074 GGTATGAGGGGTTGGGCGA 61.372 63.158 0.00 0.00 0.00 5.54
234 235 2.192175 GGTATGAGGGGTTGGGCG 59.808 66.667 0.00 0.00 0.00 6.13
235 236 2.313427 TGGGTATGAGGGGTTGGGC 61.313 63.158 0.00 0.00 0.00 5.36
236 237 1.211567 TGTGGGTATGAGGGGTTGGG 61.212 60.000 0.00 0.00 0.00 4.12
237 238 0.701731 TTGTGGGTATGAGGGGTTGG 59.298 55.000 0.00 0.00 0.00 3.77
238 239 1.615919 GGTTGTGGGTATGAGGGGTTG 60.616 57.143 0.00 0.00 0.00 3.77
239 240 0.702316 GGTTGTGGGTATGAGGGGTT 59.298 55.000 0.00 0.00 0.00 4.11
240 241 1.212250 GGGTTGTGGGTATGAGGGGT 61.212 60.000 0.00 0.00 0.00 4.95
241 242 1.211567 TGGGTTGTGGGTATGAGGGG 61.212 60.000 0.00 0.00 0.00 4.79
242 243 0.255890 CTGGGTTGTGGGTATGAGGG 59.744 60.000 0.00 0.00 0.00 4.30
243 244 0.255890 CCTGGGTTGTGGGTATGAGG 59.744 60.000 0.00 0.00 0.00 3.86
244 245 1.065418 GTCCTGGGTTGTGGGTATGAG 60.065 57.143 0.00 0.00 0.00 2.90
245 246 0.988832 GTCCTGGGTTGTGGGTATGA 59.011 55.000 0.00 0.00 0.00 2.15
246 247 0.034477 GGTCCTGGGTTGTGGGTATG 60.034 60.000 0.00 0.00 0.00 2.39
247 248 0.476808 TGGTCCTGGGTTGTGGGTAT 60.477 55.000 0.00 0.00 0.00 2.73
248 249 0.698198 TTGGTCCTGGGTTGTGGGTA 60.698 55.000 0.00 0.00 0.00 3.69
249 250 2.009882 TTGGTCCTGGGTTGTGGGT 61.010 57.895 0.00 0.00 0.00 4.51
250 251 1.530655 GTTGGTCCTGGGTTGTGGG 60.531 63.158 0.00 0.00 0.00 4.61
251 252 1.530655 GGTTGGTCCTGGGTTGTGG 60.531 63.158 0.00 0.00 0.00 4.17
252 253 1.896660 CGGTTGGTCCTGGGTTGTG 60.897 63.158 0.00 0.00 0.00 3.33
253 254 2.513895 CGGTTGGTCCTGGGTTGT 59.486 61.111 0.00 0.00 0.00 3.32
254 255 2.282180 CCGGTTGGTCCTGGGTTG 60.282 66.667 0.00 0.00 0.00 3.77
255 256 4.280019 GCCGGTTGGTCCTGGGTT 62.280 66.667 1.90 0.00 37.67 4.11
285 286 4.596585 AGGTTGGTGGGCGGTTGG 62.597 66.667 0.00 0.00 0.00 3.77
286 287 3.294493 CAGGTTGGTGGGCGGTTG 61.294 66.667 0.00 0.00 0.00 3.77
295 296 4.514585 TTGGTGGCGCAGGTTGGT 62.515 61.111 10.83 0.00 0.00 3.67
296 297 3.211564 CTTTGGTGGCGCAGGTTGG 62.212 63.158 10.83 0.00 0.00 3.77
297 298 2.336088 CTTTGGTGGCGCAGGTTG 59.664 61.111 10.83 0.00 0.00 3.77
298 299 2.123897 ACTTTGGTGGCGCAGGTT 60.124 55.556 10.83 0.00 0.00 3.50
299 300 2.594592 GACTTTGGTGGCGCAGGT 60.595 61.111 10.83 0.00 0.00 4.00
300 301 2.594303 TGACTTTGGTGGCGCAGG 60.594 61.111 10.83 0.00 0.00 4.85
301 302 2.639286 GTGACTTTGGTGGCGCAG 59.361 61.111 10.83 0.00 0.00 5.18
302 303 3.276091 CGTGACTTTGGTGGCGCA 61.276 61.111 10.83 0.00 0.00 6.09
303 304 2.954753 CTCGTGACTTTGGTGGCGC 61.955 63.158 0.00 0.00 0.00 6.53
304 305 2.317609 CCTCGTGACTTTGGTGGCG 61.318 63.158 0.00 0.00 0.00 5.69
305 306 1.070786 TCCTCGTGACTTTGGTGGC 59.929 57.895 0.00 0.00 0.00 5.01
306 307 0.105964 TGTCCTCGTGACTTTGGTGG 59.894 55.000 8.80 0.00 44.75 4.61
307 308 1.217882 GTGTCCTCGTGACTTTGGTG 58.782 55.000 8.80 0.00 44.75 4.17
308 309 0.106149 GGTGTCCTCGTGACTTTGGT 59.894 55.000 8.80 0.00 44.75 3.67
309 310 0.105964 TGGTGTCCTCGTGACTTTGG 59.894 55.000 8.80 0.00 44.75 3.28
310 311 1.217882 GTGGTGTCCTCGTGACTTTG 58.782 55.000 8.80 0.00 44.75 2.77
311 312 0.106149 GGTGGTGTCCTCGTGACTTT 59.894 55.000 8.80 0.00 44.75 2.66
312 313 1.746517 GGTGGTGTCCTCGTGACTT 59.253 57.895 8.80 0.00 44.75 3.01
313 314 2.561956 CGGTGGTGTCCTCGTGACT 61.562 63.158 8.80 0.00 44.75 3.41
314 315 2.049433 CGGTGGTGTCCTCGTGAC 60.049 66.667 1.64 1.64 44.72 3.67
315 316 2.520020 ACGGTGGTGTCCTCGTGA 60.520 61.111 6.86 0.00 34.37 4.35
316 317 2.049433 GACGGTGGTGTCCTCGTG 60.049 66.667 10.83 0.00 35.31 4.35
317 318 3.667282 CGACGGTGGTGTCCTCGT 61.667 66.667 7.23 7.23 37.00 4.18
318 319 1.371337 TATCGACGGTGGTGTCCTCG 61.371 60.000 0.00 0.00 35.40 4.63
319 320 0.100146 GTATCGACGGTGGTGTCCTC 59.900 60.000 0.00 0.00 35.40 3.71
320 321 0.609957 TGTATCGACGGTGGTGTCCT 60.610 55.000 0.00 0.00 35.40 3.85
321 322 0.179145 CTGTATCGACGGTGGTGTCC 60.179 60.000 0.00 0.00 35.40 4.02
322 323 0.179145 CCTGTATCGACGGTGGTGTC 60.179 60.000 0.00 0.00 35.49 3.67
323 324 0.896940 ACCTGTATCGACGGTGGTGT 60.897 55.000 0.00 0.00 33.18 4.16
324 325 0.457853 CACCTGTATCGACGGTGGTG 60.458 60.000 14.05 13.44 42.04 4.17
325 326 1.888018 CACCTGTATCGACGGTGGT 59.112 57.895 14.05 6.64 42.04 4.16
326 327 1.518572 GCACCTGTATCGACGGTGG 60.519 63.158 20.02 9.90 44.02 4.61
327 328 0.802222 CTGCACCTGTATCGACGGTG 60.802 60.000 16.38 16.38 45.34 4.94
328 329 0.963856 TCTGCACCTGTATCGACGGT 60.964 55.000 0.00 0.00 34.22 4.83
329 330 0.385751 ATCTGCACCTGTATCGACGG 59.614 55.000 0.00 0.00 0.00 4.79
330 331 3.349488 TTATCTGCACCTGTATCGACG 57.651 47.619 0.00 0.00 0.00 5.12
331 332 4.021894 AGGATTATCTGCACCTGTATCGAC 60.022 45.833 0.00 0.00 0.00 4.20
332 333 4.021981 CAGGATTATCTGCACCTGTATCGA 60.022 45.833 9.98 0.00 43.16 3.59
333 334 4.240888 CAGGATTATCTGCACCTGTATCG 58.759 47.826 9.98 0.00 43.16 2.92
334 335 4.564406 CCCAGGATTATCTGCACCTGTATC 60.564 50.000 15.41 1.49 45.65 2.24
335 336 3.328931 CCCAGGATTATCTGCACCTGTAT 59.671 47.826 15.41 0.00 45.65 2.29
336 337 2.705658 CCCAGGATTATCTGCACCTGTA 59.294 50.000 15.41 0.00 45.65 2.74
337 338 1.492176 CCCAGGATTATCTGCACCTGT 59.508 52.381 15.41 0.00 45.65 4.00
338 339 1.770658 TCCCAGGATTATCTGCACCTG 59.229 52.381 10.99 10.99 46.37 4.00
339 340 2.053244 CTCCCAGGATTATCTGCACCT 58.947 52.381 0.00 0.00 33.64 4.00
340 341 1.544314 GCTCCCAGGATTATCTGCACC 60.544 57.143 0.00 0.00 33.64 5.01
341 342 1.544314 GGCTCCCAGGATTATCTGCAC 60.544 57.143 0.00 0.00 33.64 4.57
342 343 0.767375 GGCTCCCAGGATTATCTGCA 59.233 55.000 0.00 0.00 33.64 4.41
343 344 0.767375 TGGCTCCCAGGATTATCTGC 59.233 55.000 0.00 0.00 33.64 4.26
344 345 3.582998 TTTGGCTCCCAGGATTATCTG 57.417 47.619 0.00 0.00 33.81 2.90
345 346 3.685550 CGTTTTGGCTCCCAGGATTATCT 60.686 47.826 0.00 0.00 33.81 1.98
346 347 2.618709 CGTTTTGGCTCCCAGGATTATC 59.381 50.000 0.00 0.00 33.81 1.75
347 348 2.654863 CGTTTTGGCTCCCAGGATTAT 58.345 47.619 0.00 0.00 33.81 1.28
348 349 1.953311 GCGTTTTGGCTCCCAGGATTA 60.953 52.381 0.00 0.00 33.81 1.75
349 350 1.250840 GCGTTTTGGCTCCCAGGATT 61.251 55.000 0.00 0.00 33.81 3.01
350 351 1.678970 GCGTTTTGGCTCCCAGGAT 60.679 57.895 0.00 0.00 33.81 3.24
351 352 2.282180 GCGTTTTGGCTCCCAGGA 60.282 61.111 0.00 0.00 33.81 3.86
352 353 3.373565 GGCGTTTTGGCTCCCAGG 61.374 66.667 0.00 0.00 40.72 4.45
359 360 0.238553 GAAGAGTGAGGCGTTTTGGC 59.761 55.000 0.00 0.00 45.27 4.52
360 361 0.512952 CGAAGAGTGAGGCGTTTTGG 59.487 55.000 0.00 0.00 0.00 3.28
361 362 0.512952 CCGAAGAGTGAGGCGTTTTG 59.487 55.000 0.00 0.00 0.00 2.44
362 363 0.391597 TCCGAAGAGTGAGGCGTTTT 59.608 50.000 0.00 0.00 0.00 2.43
363 364 0.319641 GTCCGAAGAGTGAGGCGTTT 60.320 55.000 0.00 0.00 0.00 3.60
364 365 1.179814 AGTCCGAAGAGTGAGGCGTT 61.180 55.000 0.00 0.00 0.00 4.84
365 366 0.322277 TAGTCCGAAGAGTGAGGCGT 60.322 55.000 0.00 0.00 0.00 5.68
366 367 0.099082 GTAGTCCGAAGAGTGAGGCG 59.901 60.000 0.00 0.00 0.00 5.52
367 368 1.465794 AGTAGTCCGAAGAGTGAGGC 58.534 55.000 0.00 0.00 0.00 4.70
368 369 3.876341 AGTAGTAGTCCGAAGAGTGAGG 58.124 50.000 0.00 0.00 0.00 3.86
369 370 6.987992 AGATTAGTAGTAGTCCGAAGAGTGAG 59.012 42.308 0.00 0.00 0.00 3.51
370 371 6.887013 AGATTAGTAGTAGTCCGAAGAGTGA 58.113 40.000 0.00 0.00 0.00 3.41
371 372 7.927629 AGTAGATTAGTAGTAGTCCGAAGAGTG 59.072 40.741 0.00 0.00 0.00 3.51
372 373 8.021898 AGTAGATTAGTAGTAGTCCGAAGAGT 57.978 38.462 0.00 0.00 0.00 3.24
373 374 7.599998 GGAGTAGATTAGTAGTAGTCCGAAGAG 59.400 44.444 0.00 0.00 0.00 2.85
374 375 7.070447 TGGAGTAGATTAGTAGTAGTCCGAAGA 59.930 40.741 0.00 0.00 38.61 2.87
375 376 7.215789 TGGAGTAGATTAGTAGTAGTCCGAAG 58.784 42.308 0.00 0.00 38.61 3.79
376 377 7.129457 TGGAGTAGATTAGTAGTAGTCCGAA 57.871 40.000 0.00 0.00 38.61 4.30
377 378 6.737720 TGGAGTAGATTAGTAGTAGTCCGA 57.262 41.667 0.00 0.00 38.61 4.55
378 379 7.119553 GGATTGGAGTAGATTAGTAGTAGTCCG 59.880 44.444 0.00 0.00 38.61 4.79
379 380 7.943447 TGGATTGGAGTAGATTAGTAGTAGTCC 59.057 40.741 0.00 0.00 36.96 3.85
380 381 8.921353 TGGATTGGAGTAGATTAGTAGTAGTC 57.079 38.462 0.00 0.00 0.00 2.59
381 382 9.134055 GTTGGATTGGAGTAGATTAGTAGTAGT 57.866 37.037 0.00 0.00 0.00 2.73
382 383 8.291032 CGTTGGATTGGAGTAGATTAGTAGTAG 58.709 40.741 0.00 0.00 0.00 2.57
383 384 7.255381 GCGTTGGATTGGAGTAGATTAGTAGTA 60.255 40.741 0.00 0.00 0.00 1.82
384 385 6.461231 GCGTTGGATTGGAGTAGATTAGTAGT 60.461 42.308 0.00 0.00 0.00 2.73
385 386 5.921408 GCGTTGGATTGGAGTAGATTAGTAG 59.079 44.000 0.00 0.00 0.00 2.57
386 387 5.361571 TGCGTTGGATTGGAGTAGATTAGTA 59.638 40.000 0.00 0.00 0.00 1.82
387 388 4.161565 TGCGTTGGATTGGAGTAGATTAGT 59.838 41.667 0.00 0.00 0.00 2.24
388 389 4.693283 TGCGTTGGATTGGAGTAGATTAG 58.307 43.478 0.00 0.00 0.00 1.73
389 390 4.746535 TGCGTTGGATTGGAGTAGATTA 57.253 40.909 0.00 0.00 0.00 1.75
390 391 3.627395 TGCGTTGGATTGGAGTAGATT 57.373 42.857 0.00 0.00 0.00 2.40
391 392 3.627395 TTGCGTTGGATTGGAGTAGAT 57.373 42.857 0.00 0.00 0.00 1.98
392 393 3.627395 ATTGCGTTGGATTGGAGTAGA 57.373 42.857 0.00 0.00 0.00 2.59
393 394 4.662145 GAAATTGCGTTGGATTGGAGTAG 58.338 43.478 0.00 0.00 0.00 2.57
394 395 3.126171 CGAAATTGCGTTGGATTGGAGTA 59.874 43.478 0.00 0.00 0.00 2.59
395 396 2.095263 CGAAATTGCGTTGGATTGGAGT 60.095 45.455 0.00 0.00 0.00 3.85
396 397 2.161410 TCGAAATTGCGTTGGATTGGAG 59.839 45.455 5.57 0.00 0.00 3.86
397 398 2.095466 GTCGAAATTGCGTTGGATTGGA 60.095 45.455 5.57 0.00 0.00 3.53
398 399 2.095263 AGTCGAAATTGCGTTGGATTGG 60.095 45.455 5.57 0.00 0.00 3.16
399 400 3.201726 AGTCGAAATTGCGTTGGATTG 57.798 42.857 5.57 0.00 0.00 2.67
400 401 4.000988 AGTAGTCGAAATTGCGTTGGATT 58.999 39.130 5.57 0.00 0.00 3.01
401 402 3.596214 AGTAGTCGAAATTGCGTTGGAT 58.404 40.909 5.57 0.00 0.00 3.41
402 403 3.034721 AGTAGTCGAAATTGCGTTGGA 57.965 42.857 5.57 0.00 0.00 3.53
403 404 3.924686 ACTAGTAGTCGAAATTGCGTTGG 59.075 43.478 5.57 0.00 0.00 3.77
404 405 5.114804 GACTAGTAGTCGAAATTGCGTTG 57.885 43.478 14.40 0.00 35.28 4.10
416 417 3.003897 CGAGATGGGCTTGACTAGTAGTC 59.996 52.174 21.35 21.35 45.26 2.59
417 418 2.952978 CGAGATGGGCTTGACTAGTAGT 59.047 50.000 1.37 1.37 0.00 2.73
418 419 2.952978 ACGAGATGGGCTTGACTAGTAG 59.047 50.000 0.00 0.00 0.00 2.57
419 420 3.014304 ACGAGATGGGCTTGACTAGTA 57.986 47.619 0.00 0.00 0.00 1.82
420 421 1.853963 ACGAGATGGGCTTGACTAGT 58.146 50.000 0.00 0.00 0.00 2.57
421 422 2.952978 AGTACGAGATGGGCTTGACTAG 59.047 50.000 0.00 0.00 0.00 2.57
422 423 3.014304 AGTACGAGATGGGCTTGACTA 57.986 47.619 0.00 0.00 0.00 2.59
423 424 1.853963 AGTACGAGATGGGCTTGACT 58.146 50.000 0.00 0.00 0.00 3.41
424 425 3.795623 TTAGTACGAGATGGGCTTGAC 57.204 47.619 0.00 0.00 0.00 3.18
425 426 4.215908 AGATTAGTACGAGATGGGCTTGA 58.784 43.478 0.00 0.00 0.00 3.02
426 427 4.592485 AGATTAGTACGAGATGGGCTTG 57.408 45.455 0.00 0.00 0.00 4.01
427 428 5.386924 AGTAGATTAGTACGAGATGGGCTT 58.613 41.667 0.00 0.00 0.00 4.35
428 429 4.988029 AGTAGATTAGTACGAGATGGGCT 58.012 43.478 0.00 0.00 0.00 5.19
429 430 4.156373 GGAGTAGATTAGTACGAGATGGGC 59.844 50.000 0.00 0.00 0.00 5.36
430 431 5.314529 TGGAGTAGATTAGTACGAGATGGG 58.685 45.833 0.00 0.00 0.00 4.00
431 432 6.879276 TTGGAGTAGATTAGTACGAGATGG 57.121 41.667 0.00 0.00 0.00 3.51
432 433 7.175119 TGGATTGGAGTAGATTAGTACGAGATG 59.825 40.741 0.00 0.00 0.00 2.90
433 434 7.232188 TGGATTGGAGTAGATTAGTACGAGAT 58.768 38.462 0.00 0.00 0.00 2.75
434 435 6.598503 TGGATTGGAGTAGATTAGTACGAGA 58.401 40.000 0.00 0.00 0.00 4.04
435 436 6.879276 TGGATTGGAGTAGATTAGTACGAG 57.121 41.667 0.00 0.00 0.00 4.18
436 437 6.040166 GGTTGGATTGGAGTAGATTAGTACGA 59.960 42.308 0.00 0.00 0.00 3.43
437 438 6.183360 TGGTTGGATTGGAGTAGATTAGTACG 60.183 42.308 0.00 0.00 0.00 3.67
438 439 7.120923 TGGTTGGATTGGAGTAGATTAGTAC 57.879 40.000 0.00 0.00 0.00 2.73
439 440 7.743116 TTGGTTGGATTGGAGTAGATTAGTA 57.257 36.000 0.00 0.00 0.00 1.82
440 441 6.636454 TTGGTTGGATTGGAGTAGATTAGT 57.364 37.500 0.00 0.00 0.00 2.24
441 442 8.525290 AATTTGGTTGGATTGGAGTAGATTAG 57.475 34.615 0.00 0.00 0.00 1.73
442 443 8.893563 AAATTTGGTTGGATTGGAGTAGATTA 57.106 30.769 0.00 0.00 0.00 1.75
443 444 7.675619 AGAAATTTGGTTGGATTGGAGTAGATT 59.324 33.333 0.00 0.00 0.00 2.40
444 445 7.123247 CAGAAATTTGGTTGGATTGGAGTAGAT 59.877 37.037 0.00 0.00 0.00 1.98
445 446 6.434028 CAGAAATTTGGTTGGATTGGAGTAGA 59.566 38.462 0.00 0.00 0.00 2.59
446 447 6.624423 CAGAAATTTGGTTGGATTGGAGTAG 58.376 40.000 0.00 0.00 0.00 2.57
447 448 5.047377 GCAGAAATTTGGTTGGATTGGAGTA 60.047 40.000 0.00 0.00 0.00 2.59
448 449 4.262592 GCAGAAATTTGGTTGGATTGGAGT 60.263 41.667 0.00 0.00 0.00 3.85
449 450 4.020839 AGCAGAAATTTGGTTGGATTGGAG 60.021 41.667 0.00 0.00 0.00 3.86
450 451 3.903090 AGCAGAAATTTGGTTGGATTGGA 59.097 39.130 0.00 0.00 0.00 3.53
451 452 4.276058 AGCAGAAATTTGGTTGGATTGG 57.724 40.909 0.00 0.00 0.00 3.16
452 453 6.029346 AGTAGCAGAAATTTGGTTGGATTG 57.971 37.500 0.00 0.00 0.00 2.67
453 454 6.948309 ACTAGTAGCAGAAATTTGGTTGGATT 59.052 34.615 0.00 0.00 0.00 3.01
454 455 6.485171 ACTAGTAGCAGAAATTTGGTTGGAT 58.515 36.000 0.00 0.00 0.00 3.41
455 456 5.876357 ACTAGTAGCAGAAATTTGGTTGGA 58.124 37.500 0.00 0.00 0.00 3.53
456 457 5.705441 TGACTAGTAGCAGAAATTTGGTTGG 59.295 40.000 0.00 0.00 0.00 3.77
457 458 6.801539 TGACTAGTAGCAGAAATTTGGTTG 57.198 37.500 0.00 0.00 0.00 3.77
458 459 6.072452 GCTTGACTAGTAGCAGAAATTTGGTT 60.072 38.462 11.95 0.00 37.35 3.67
459 460 5.412904 GCTTGACTAGTAGCAGAAATTTGGT 59.587 40.000 11.95 0.00 37.35 3.67
460 461 5.163713 GGCTTGACTAGTAGCAGAAATTTGG 60.164 44.000 17.34 0.00 39.15 3.28
461 462 5.163713 GGGCTTGACTAGTAGCAGAAATTTG 60.164 44.000 17.34 0.00 39.15 2.32
462 463 4.944317 GGGCTTGACTAGTAGCAGAAATTT 59.056 41.667 17.34 0.00 39.15 1.82
463 464 4.019321 TGGGCTTGACTAGTAGCAGAAATT 60.019 41.667 17.34 0.00 39.15 1.82
464 465 3.519510 TGGGCTTGACTAGTAGCAGAAAT 59.480 43.478 17.34 0.00 39.15 2.17
465 466 2.903784 TGGGCTTGACTAGTAGCAGAAA 59.096 45.455 17.34 0.00 39.15 2.52
466 467 2.536066 TGGGCTTGACTAGTAGCAGAA 58.464 47.619 17.34 2.05 39.15 3.02
467 468 2.231716 TGGGCTTGACTAGTAGCAGA 57.768 50.000 17.34 2.66 39.15 4.26
468 469 3.334583 TTTGGGCTTGACTAGTAGCAG 57.665 47.619 17.34 5.69 39.15 4.24
469 470 4.261801 GAATTTGGGCTTGACTAGTAGCA 58.738 43.478 17.34 0.27 39.15 3.49
470 471 3.628032 GGAATTTGGGCTTGACTAGTAGC 59.372 47.826 8.86 8.86 36.66 3.58
471 472 5.104259 AGGAATTTGGGCTTGACTAGTAG 57.896 43.478 0.00 0.00 0.00 2.57
472 473 5.013704 TCAAGGAATTTGGGCTTGACTAGTA 59.986 40.000 0.00 0.00 37.39 1.82
473 474 4.082125 CAAGGAATTTGGGCTTGACTAGT 58.918 43.478 0.00 0.00 32.95 2.57
474 475 4.156739 GTCAAGGAATTTGGGCTTGACTAG 59.843 45.833 6.60 0.00 45.86 2.57
475 476 4.079253 GTCAAGGAATTTGGGCTTGACTA 58.921 43.478 6.60 0.00 45.86 2.59
476 477 2.893489 GTCAAGGAATTTGGGCTTGACT 59.107 45.455 6.60 0.00 45.86 3.41
477 478 3.303881 GTCAAGGAATTTGGGCTTGAC 57.696 47.619 1.05 1.05 44.21 3.18
478 479 2.627699 GTGTCAAGGAATTTGGGCTTGA 59.372 45.455 0.00 0.00 37.39 3.02
479 480 2.629617 AGTGTCAAGGAATTTGGGCTTG 59.370 45.455 0.00 0.00 37.39 4.01
480 481 2.893489 GAGTGTCAAGGAATTTGGGCTT 59.107 45.455 0.00 0.00 37.39 4.35
481 482 2.519013 GAGTGTCAAGGAATTTGGGCT 58.481 47.619 0.00 0.00 37.39 5.19
482 483 1.200020 CGAGTGTCAAGGAATTTGGGC 59.800 52.381 0.00 0.00 37.39 5.36
483 484 1.812571 CCGAGTGTCAAGGAATTTGGG 59.187 52.381 0.00 0.00 37.39 4.12
484 485 1.200020 GCCGAGTGTCAAGGAATTTGG 59.800 52.381 0.00 0.00 37.39 3.28
485 486 2.095567 CAGCCGAGTGTCAAGGAATTTG 60.096 50.000 0.00 0.00 38.17 2.32
486 487 2.154462 CAGCCGAGTGTCAAGGAATTT 58.846 47.619 0.00 0.00 0.00 1.82
487 488 1.072331 ACAGCCGAGTGTCAAGGAATT 59.928 47.619 0.00 0.00 0.00 2.17
488 489 0.687354 ACAGCCGAGTGTCAAGGAAT 59.313 50.000 0.00 0.00 0.00 3.01
489 490 1.000506 GTACAGCCGAGTGTCAAGGAA 59.999 52.381 0.00 0.00 31.46 3.36
490 491 0.601558 GTACAGCCGAGTGTCAAGGA 59.398 55.000 0.00 0.00 31.46 3.36
491 492 0.603569 AGTACAGCCGAGTGTCAAGG 59.396 55.000 0.00 0.00 31.46 3.61
492 493 2.061773 CAAGTACAGCCGAGTGTCAAG 58.938 52.381 0.00 0.00 31.46 3.02
493 494 1.411246 ACAAGTACAGCCGAGTGTCAA 59.589 47.619 0.00 0.00 31.46 3.18
494 495 1.037493 ACAAGTACAGCCGAGTGTCA 58.963 50.000 0.00 0.00 31.46 3.58
495 496 2.059541 GAACAAGTACAGCCGAGTGTC 58.940 52.381 0.00 0.00 31.46 3.67
496 497 1.411246 TGAACAAGTACAGCCGAGTGT 59.589 47.619 0.00 0.00 34.21 3.55
497 498 1.792949 GTGAACAAGTACAGCCGAGTG 59.207 52.381 0.00 0.00 0.00 3.51
498 499 1.687123 AGTGAACAAGTACAGCCGAGT 59.313 47.619 0.00 0.00 0.00 4.18
499 500 2.440539 AGTGAACAAGTACAGCCGAG 57.559 50.000 0.00 0.00 0.00 4.63
500 501 3.305813 CCTTAGTGAACAAGTACAGCCGA 60.306 47.826 0.00 0.00 0.00 5.54
501 502 2.993899 CCTTAGTGAACAAGTACAGCCG 59.006 50.000 0.00 0.00 0.00 5.52
502 503 4.267349 TCCTTAGTGAACAAGTACAGCC 57.733 45.455 0.00 0.00 0.00 4.85
503 504 5.238583 ACATCCTTAGTGAACAAGTACAGC 58.761 41.667 0.00 0.00 0.00 4.40
504 505 6.455647 TGACATCCTTAGTGAACAAGTACAG 58.544 40.000 0.00 0.00 0.00 2.74
509 510 4.637534 CCCATGACATCCTTAGTGAACAAG 59.362 45.833 0.00 0.00 0.00 3.16
512 513 3.941483 CACCCATGACATCCTTAGTGAAC 59.059 47.826 0.00 0.00 0.00 3.18
525 526 4.142687 CGGTAAAGAAATGACACCCATGAC 60.143 45.833 0.00 0.00 35.24 3.06
526 527 4.006989 CGGTAAAGAAATGACACCCATGA 58.993 43.478 0.00 0.00 35.24 3.07
529 530 3.773418 TCGGTAAAGAAATGACACCCA 57.227 42.857 0.00 0.00 0.00 4.51
531 532 5.237779 TGAAGTTCGGTAAAGAAATGACACC 59.762 40.000 0.00 0.00 0.00 4.16
672 673 6.956202 TTGGAGTAGATTAGTAGTAGCACC 57.044 41.667 0.00 0.00 0.00 5.01
703 810 8.838365 GCAGCAGTAGACTAGTAGTAGAAATTA 58.162 37.037 11.68 0.00 0.00 1.40
899 1032 1.961394 GACTGGATGCCGACCTGTATA 59.039 52.381 0.00 0.00 39.12 1.47
919 1052 0.744057 TGGCTGTGTGTGTGAGTGTG 60.744 55.000 0.00 0.00 0.00 3.82
920 1053 0.181114 ATGGCTGTGTGTGTGAGTGT 59.819 50.000 0.00 0.00 0.00 3.55
921 1054 0.589708 CATGGCTGTGTGTGTGAGTG 59.410 55.000 0.00 0.00 0.00 3.51
922 1055 0.181114 ACATGGCTGTGTGTGTGAGT 59.819 50.000 0.00 0.00 33.22 3.41
923 1056 0.870393 GACATGGCTGTGTGTGTGAG 59.130 55.000 0.00 0.00 35.14 3.51
924 1057 0.534877 GGACATGGCTGTGTGTGTGA 60.535 55.000 0.00 0.00 35.14 3.58
925 1058 0.535780 AGGACATGGCTGTGTGTGTG 60.536 55.000 0.00 0.00 35.14 3.82
926 1059 0.183492 AAGGACATGGCTGTGTGTGT 59.817 50.000 0.00 0.00 35.14 3.72
927 1060 1.806542 GTAAGGACATGGCTGTGTGTG 59.193 52.381 0.00 0.00 35.14 3.82
928 1061 1.699634 AGTAAGGACATGGCTGTGTGT 59.300 47.619 0.00 0.00 35.14 3.72
967 1111 1.229625 TCTGGATGGAGTGTGGCCT 60.230 57.895 3.32 0.00 0.00 5.19
968 1112 1.222936 CTCTGGATGGAGTGTGGCC 59.777 63.158 0.00 0.00 0.00 5.36
1048 1202 0.908198 GCAACTGAGAGGGACAGGAT 59.092 55.000 0.00 0.00 39.38 3.24
1049 1203 0.178921 AGCAACTGAGAGGGACAGGA 60.179 55.000 0.00 0.00 39.38 3.86
1062 1216 1.414919 TCCAACTTGTCGGTAGCAACT 59.585 47.619 0.00 0.00 0.00 3.16
1063 1217 1.529865 GTCCAACTTGTCGGTAGCAAC 59.470 52.381 0.00 0.00 0.00 4.17
1065 1219 0.034337 GGTCCAACTTGTCGGTAGCA 59.966 55.000 0.00 0.00 0.00 3.49
1068 1222 1.342174 GTCTGGTCCAACTTGTCGGTA 59.658 52.381 0.00 0.00 0.00 4.02
2271 2458 1.807886 GAGCCGGATGTACACGTCT 59.192 57.895 5.05 0.00 32.61 4.18
2351 2538 5.161358 GGAAAATCTGGGACGAAAATTCAC 58.839 41.667 0.00 0.00 0.00 3.18
2360 2547 3.088532 TGAAATGGGAAAATCTGGGACG 58.911 45.455 0.00 0.00 0.00 4.79
2369 2616 6.212955 GTGTTCTCGAATTGAAATGGGAAAA 58.787 36.000 0.00 0.00 0.00 2.29
2390 2638 2.744202 GCTGAAGAAATCGACATGGTGT 59.256 45.455 0.00 0.00 0.00 4.16
2391 2639 2.096496 GGCTGAAGAAATCGACATGGTG 59.904 50.000 0.00 0.00 0.00 4.17
2434 2682 1.811266 CCACGAGGGCGATCACAAG 60.811 63.158 0.00 0.00 41.64 3.16
2446 3468 2.336809 GGAGATAGCCGCCACGAG 59.663 66.667 0.00 0.00 34.56 4.18
2478 3500 3.442441 CCAAAGGCAAACGCTCCA 58.558 55.556 0.00 0.00 0.00 3.86
2576 3619 2.827190 CCTGATCGTCCCGTCGGA 60.827 66.667 14.39 0.00 35.01 4.55
2579 3622 1.896122 AAACCCCTGATCGTCCCGTC 61.896 60.000 0.00 0.00 0.00 4.79
2598 3641 5.156608 TGCTCATCTTGTTCTCATCAGAA 57.843 39.130 0.00 0.00 36.19 3.02
2601 3644 3.268330 GCTGCTCATCTTGTTCTCATCA 58.732 45.455 0.00 0.00 0.00 3.07
2654 3697 1.028868 GGCCAGAATCACTGCCAGAC 61.029 60.000 0.00 0.00 44.52 3.51
3188 4386 3.131577 TCTTCATCTGCATGGCCAAAATC 59.868 43.478 10.96 0.00 0.00 2.17
3196 4394 2.793933 CGCTTTTCTTCATCTGCATGG 58.206 47.619 0.00 0.00 0.00 3.66
3265 4463 1.608046 GAGATAGAGGAGGCCCCGG 60.608 68.421 0.00 0.00 40.87 5.73
3479 4729 9.691362 ATAACACATCCAACTTACAAAATTGTC 57.309 29.630 1.37 0.00 42.35 3.18
3488 4742 7.865706 ATCCTTGATAACACATCCAACTTAC 57.134 36.000 0.00 0.00 0.00 2.34
3544 4798 0.532573 CTCTGGTGACATGTAGCCGT 59.467 55.000 0.00 0.00 41.51 5.68
3602 4856 3.067461 GCACCATGACACCAAAACTGTAA 59.933 43.478 0.00 0.00 0.00 2.41
3653 4907 0.651031 GCTCGTCATCGTAAAAGCCC 59.349 55.000 0.00 0.00 38.33 5.19
3706 4960 2.935849 TGCGAATTAATCATGCTCGTGT 59.064 40.909 7.97 0.00 32.23 4.49
3725 4979 4.514545 TCGTCAAATATGAATCACGTGC 57.485 40.909 11.67 0.00 37.30 5.34
3744 5013 7.905126 TGATTGCATATTAGTAACACAGTTCG 58.095 34.615 0.00 0.00 0.00 3.95
3787 5063 1.271379 CCTTCCTTCCACAACGTCCAT 60.271 52.381 0.00 0.00 0.00 3.41
3823 5099 1.442526 CCACCATCGCCTCATCAAGC 61.443 60.000 0.00 0.00 0.00 4.01
3839 5115 0.250234 TGATCACAGCTACTGCCCAC 59.750 55.000 0.00 0.00 40.80 4.61
3938 5214 1.826720 GGTGGCCAACATCATGACAAT 59.173 47.619 18.33 0.00 0.00 2.71
3973 5249 0.034767 CAGGCTCATTTGGCTCTGGA 60.035 55.000 0.00 0.00 41.04 3.86
4062 5338 3.119388 TCCAAACTACCGAGTATCCGTTG 60.119 47.826 0.00 0.00 33.58 4.10
4084 5360 3.378512 TGCTCCATCTCAACTAGTCCAT 58.621 45.455 0.00 0.00 0.00 3.41
4105 5381 1.202976 ACACAAAGCATGCCCTCTTCT 60.203 47.619 15.66 0.00 0.00 2.85
4272 5565 0.336048 AAGCCCACCATAGCACCATT 59.664 50.000 0.00 0.00 0.00 3.16
4297 5592 5.105756 GGTTTATTAATGCAACAGGTCAGCT 60.106 40.000 12.12 0.00 0.00 4.24
4303 5599 6.515272 ACTCTGGTTTATTAATGCAACAGG 57.485 37.500 11.78 7.06 0.00 4.00
4305 5601 7.987750 TGTACTCTGGTTTATTAATGCAACA 57.012 32.000 12.12 1.81 0.00 3.33
4332 5628 6.456501 CCCCAATCCGTTTTGTTGTAAATTA 58.543 36.000 0.00 0.00 0.00 1.40
4333 5629 5.301555 CCCCAATCCGTTTTGTTGTAAATT 58.698 37.500 0.00 0.00 0.00 1.82
4334 5630 4.262678 CCCCCAATCCGTTTTGTTGTAAAT 60.263 41.667 0.00 0.00 0.00 1.40
4335 5631 3.069729 CCCCCAATCCGTTTTGTTGTAAA 59.930 43.478 0.00 0.00 0.00 2.01
4336 5632 2.628657 CCCCCAATCCGTTTTGTTGTAA 59.371 45.455 0.00 0.00 0.00 2.41
4343 5639 0.333652 CCCTACCCCCAATCCGTTTT 59.666 55.000 0.00 0.00 0.00 2.43
4412 5714 5.416013 CAGGCATCGAATCTGGAGTACTATA 59.584 44.000 0.00 0.00 0.00 1.31
4415 5717 2.363680 CAGGCATCGAATCTGGAGTACT 59.636 50.000 0.00 0.00 0.00 2.73
4490 5795 4.532126 ACACTCAACTGATCCACCTAATCA 59.468 41.667 0.00 0.00 0.00 2.57
4583 5889 7.450014 TGAGGCATTGACCTTCAAAATAAAGTA 59.550 33.333 1.91 0.00 41.32 2.24
4602 5908 4.163649 TGATCTGAGTCATCTTTGAGGCAT 59.836 41.667 0.00 0.00 30.85 4.40
4622 5928 2.217038 CCCGATGATCCCCCGTGAT 61.217 63.158 0.00 0.00 0.00 3.06
4626 5932 3.941188 CACCCCGATGATCCCCCG 61.941 72.222 0.00 0.00 0.00 5.73
4642 5948 2.094234 TGCGAAGAATTGTCCTCGATCA 60.094 45.455 1.22 0.00 39.62 2.92
4646 5952 1.391485 CTGTGCGAAGAATTGTCCTCG 59.609 52.381 0.00 0.00 40.11 4.63
4664 5970 6.401394 TCCACTATCAAATCAACACTCTCTG 58.599 40.000 0.00 0.00 0.00 3.35
4671 5977 4.910195 ACTGCTCCACTATCAAATCAACA 58.090 39.130 0.00 0.00 0.00 3.33
4672 5978 5.392380 CCAACTGCTCCACTATCAAATCAAC 60.392 44.000 0.00 0.00 0.00 3.18
4680 5986 1.279271 ACCACCAACTGCTCCACTATC 59.721 52.381 0.00 0.00 0.00 2.08
4681 5987 1.279271 GACCACCAACTGCTCCACTAT 59.721 52.381 0.00 0.00 0.00 2.12
4682 5988 0.685097 GACCACCAACTGCTCCACTA 59.315 55.000 0.00 0.00 0.00 2.74
4687 5994 0.033504 TTCGAGACCACCAACTGCTC 59.966 55.000 0.00 0.00 0.00 4.26
4721 6028 8.450578 TTTGCTATCCTCTTGTTGTATTATGG 57.549 34.615 0.00 0.00 0.00 2.74
4804 6114 4.762765 CCGAAGCTGTAGATAGTAGGACAT 59.237 45.833 0.00 0.00 0.00 3.06
4811 6121 3.353557 TGACACCGAAGCTGTAGATAGT 58.646 45.455 0.00 0.00 0.00 2.12
4910 6220 9.245962 GTTAATCTTGCTCGTGTAGTGTATTAT 57.754 33.333 0.00 0.00 0.00 1.28
4972 9632 5.643379 ACGACCAAAATGATTGCATACTT 57.357 34.783 0.00 0.00 33.44 2.24
4974 9634 6.586082 AGAAAACGACCAAAATGATTGCATAC 59.414 34.615 0.00 0.00 33.44 2.39
5003 9663 0.322816 AGCCTTCCACGACATGCATT 60.323 50.000 0.00 0.00 0.00 3.56
5007 9667 1.003355 ACCAGCCTTCCACGACATG 60.003 57.895 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.