Multiple sequence alignment - TraesCS2B01G578100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G578100 chr2B 100.000 2546 0 0 1 2546 766184608 766182063 0.000000e+00 4702.0
1 TraesCS2B01G578100 chr2B 94.643 392 20 1 1 392 447864230 447864620 7.790000e-170 606.0
2 TraesCS2B01G578100 chr2D 94.215 1210 41 10 572 1760 624287176 624285975 0.000000e+00 1820.0
3 TraesCS2B01G578100 chr2D 94.710 397 19 2 1 397 38797642 38798036 1.290000e-172 616.0
4 TraesCS2B01G578100 chr2D 94.207 397 21 2 1 397 40916323 40916717 2.800000e-169 604.0
5 TraesCS2B01G578100 chr2D 88.217 314 29 4 1904 2212 624285885 624285575 4.000000e-98 368.0
6 TraesCS2B01G578100 chr2D 85.664 286 35 6 2261 2545 624285578 624285298 1.920000e-76 296.0
7 TraesCS2B01G578100 chr2A 92.090 670 28 13 566 1214 755693820 755693155 0.000000e+00 920.0
8 TraesCS2B01G578100 chr2A 92.920 565 33 2 1200 1760 755693042 755692481 0.000000e+00 815.0
9 TraesCS2B01G578100 chr2A 89.324 281 28 1 2032 2312 755690160 755689882 4.030000e-93 351.0
10 TraesCS2B01G578100 chr2A 94.262 122 7 0 1776 1897 755692496 755692375 1.200000e-43 187.0
11 TraesCS2B01G578100 chr2A 95.238 105 5 0 1904 2008 755692395 755692291 1.570000e-37 167.0
12 TraesCS2B01G578100 chr2A 91.176 102 9 0 2445 2546 755688677 755688576 3.420000e-29 139.0
13 TraesCS2B01G578100 chr7B 96.701 394 13 0 1 394 657537307 657536914 0.000000e+00 656.0
14 TraesCS2B01G578100 chr7B 82.022 89 11 4 1794 1882 617786577 617786494 1.260000e-08 71.3
15 TraesCS2B01G578100 chr5B 94.975 398 20 0 1 398 222422400 222422003 2.150000e-175 625.0
16 TraesCS2B01G578100 chr5B 94.388 392 22 0 1 392 435776699 435776308 1.010000e-168 603.0
17 TraesCS2B01G578100 chr5B 94.177 395 20 2 1 393 55262866 55263259 1.300000e-167 599.0
18 TraesCS2B01G578100 chrUn 95.178 394 19 0 1 394 194638220 194637827 7.740000e-175 623.0
19 TraesCS2B01G578100 chrUn 97.059 34 1 0 1957 1990 267176856 267176889 9.840000e-05 58.4
20 TraesCS2B01G578100 chr1B 94.148 393 23 0 1 393 577836383 577836775 1.300000e-167 599.0
21 TraesCS2B01G578100 chr3B 97.059 34 1 0 1957 1990 45284266 45284233 9.840000e-05 58.4
22 TraesCS2B01G578100 chr3B 97.059 34 1 0 1957 1990 45287600 45287567 9.840000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G578100 chr2B 766182063 766184608 2545 True 4702.000000 4702 100.000000 1 2546 1 chr2B.!!$R1 2545
1 TraesCS2B01G578100 chr2D 624285298 624287176 1878 True 828.000000 1820 89.365333 572 2545 3 chr2D.!!$R1 1973
2 TraesCS2B01G578100 chr2A 755688576 755693820 5244 True 429.833333 920 92.501667 566 2546 6 chr2A.!!$R1 1980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.185175 AAGGTTTTTGGGGAGCGTCT 59.815 50.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1920 2084 0.179023 TTAGCGGTTCCGGTTTGGTT 60.179 50.0 20.4 0.0 40.66 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.044946 GCCCAGGAGAACGGCAAT 60.045 61.111 0.00 0.00 42.52 3.56
22 23 1.223487 GCCCAGGAGAACGGCAATA 59.777 57.895 0.00 0.00 42.52 1.90
23 24 0.393808 GCCCAGGAGAACGGCAATAA 60.394 55.000 0.00 0.00 42.52 1.40
24 25 1.668419 CCCAGGAGAACGGCAATAAG 58.332 55.000 0.00 0.00 0.00 1.73
25 26 1.668419 CCAGGAGAACGGCAATAAGG 58.332 55.000 0.00 0.00 0.00 2.69
26 27 1.065418 CCAGGAGAACGGCAATAAGGT 60.065 52.381 0.00 0.00 0.00 3.50
27 28 2.618045 CCAGGAGAACGGCAATAAGGTT 60.618 50.000 0.00 0.00 0.00 3.50
28 29 3.081804 CAGGAGAACGGCAATAAGGTTT 58.918 45.455 0.00 0.00 0.00 3.27
29 30 3.506067 CAGGAGAACGGCAATAAGGTTTT 59.494 43.478 0.00 0.00 0.00 2.43
30 31 4.022329 CAGGAGAACGGCAATAAGGTTTTT 60.022 41.667 0.00 0.00 0.00 1.94
31 32 4.022329 AGGAGAACGGCAATAAGGTTTTTG 60.022 41.667 0.00 0.00 0.00 2.44
32 33 4.234574 GAGAACGGCAATAAGGTTTTTGG 58.765 43.478 0.00 0.00 0.00 3.28
33 34 3.006430 AGAACGGCAATAAGGTTTTTGGG 59.994 43.478 0.00 0.00 0.00 4.12
34 35 1.621317 ACGGCAATAAGGTTTTTGGGG 59.379 47.619 0.00 0.00 0.00 4.96
35 36 1.896465 CGGCAATAAGGTTTTTGGGGA 59.104 47.619 0.00 0.00 0.00 4.81
36 37 2.094234 CGGCAATAAGGTTTTTGGGGAG 60.094 50.000 0.00 0.00 0.00 4.30
37 38 2.354704 GGCAATAAGGTTTTTGGGGAGC 60.355 50.000 0.00 0.00 0.00 4.70
38 39 2.673893 GCAATAAGGTTTTTGGGGAGCG 60.674 50.000 0.00 0.00 0.00 5.03
39 40 2.560981 CAATAAGGTTTTTGGGGAGCGT 59.439 45.455 0.00 0.00 0.00 5.07
40 41 1.900245 TAAGGTTTTTGGGGAGCGTC 58.100 50.000 0.00 0.00 0.00 5.19
41 42 0.185175 AAGGTTTTTGGGGAGCGTCT 59.815 50.000 0.00 0.00 0.00 4.18
42 43 0.250770 AGGTTTTTGGGGAGCGTCTC 60.251 55.000 0.00 0.00 0.00 3.36
43 44 1.574702 GGTTTTTGGGGAGCGTCTCG 61.575 60.000 1.64 0.00 0.00 4.04
44 45 1.302192 TTTTTGGGGAGCGTCTCGG 60.302 57.895 1.64 0.00 0.00 4.63
45 46 3.894547 TTTTGGGGAGCGTCTCGGC 62.895 63.158 1.64 0.00 0.00 5.54
62 63 4.933064 CGCGACTGCTCCCGATCC 62.933 72.222 0.00 0.00 39.65 3.36
63 64 4.933064 GCGACTGCTCCCGATCCG 62.933 72.222 0.00 0.00 38.39 4.18
64 65 3.518998 CGACTGCTCCCGATCCGT 61.519 66.667 0.00 0.00 0.00 4.69
65 66 2.413765 GACTGCTCCCGATCCGTC 59.586 66.667 0.00 0.00 0.00 4.79
66 67 3.140225 GACTGCTCCCGATCCGTCC 62.140 68.421 0.00 0.00 0.00 4.79
67 68 3.917760 CTGCTCCCGATCCGTCCC 61.918 72.222 0.00 0.00 0.00 4.46
70 71 3.227276 CTCCCGATCCGTCCCCAG 61.227 72.222 0.00 0.00 0.00 4.45
73 74 3.917760 CCGATCCGTCCCCAGCTC 61.918 72.222 0.00 0.00 0.00 4.09
74 75 3.917760 CGATCCGTCCCCAGCTCC 61.918 72.222 0.00 0.00 0.00 4.70
75 76 3.917760 GATCCGTCCCCAGCTCCG 61.918 72.222 0.00 0.00 0.00 4.63
76 77 4.779733 ATCCGTCCCCAGCTCCGT 62.780 66.667 0.00 0.00 0.00 4.69
79 80 4.135153 CGTCCCCAGCTCCGTCAG 62.135 72.222 0.00 0.00 0.00 3.51
98 99 2.017138 GCCTCTGCTTCCACTACTTC 57.983 55.000 0.00 0.00 33.53 3.01
99 100 1.406205 GCCTCTGCTTCCACTACTTCC 60.406 57.143 0.00 0.00 33.53 3.46
100 101 1.208293 CCTCTGCTTCCACTACTTCCC 59.792 57.143 0.00 0.00 0.00 3.97
101 102 1.208293 CTCTGCTTCCACTACTTCCCC 59.792 57.143 0.00 0.00 0.00 4.81
102 103 1.203313 TCTGCTTCCACTACTTCCCCT 60.203 52.381 0.00 0.00 0.00 4.79
103 104 0.984230 TGCTTCCACTACTTCCCCTG 59.016 55.000 0.00 0.00 0.00 4.45
104 105 0.393132 GCTTCCACTACTTCCCCTGC 60.393 60.000 0.00 0.00 0.00 4.85
105 106 0.984230 CTTCCACTACTTCCCCTGCA 59.016 55.000 0.00 0.00 0.00 4.41
106 107 1.561542 CTTCCACTACTTCCCCTGCAT 59.438 52.381 0.00 0.00 0.00 3.96
107 108 1.204146 TCCACTACTTCCCCTGCATC 58.796 55.000 0.00 0.00 0.00 3.91
108 109 0.911769 CCACTACTTCCCCTGCATCA 59.088 55.000 0.00 0.00 0.00 3.07
109 110 1.281867 CCACTACTTCCCCTGCATCAA 59.718 52.381 0.00 0.00 0.00 2.57
110 111 2.359900 CACTACTTCCCCTGCATCAAC 58.640 52.381 0.00 0.00 0.00 3.18
111 112 1.985159 ACTACTTCCCCTGCATCAACA 59.015 47.619 0.00 0.00 0.00 3.33
112 113 2.290323 ACTACTTCCCCTGCATCAACAC 60.290 50.000 0.00 0.00 0.00 3.32
113 114 0.251341 ACTTCCCCTGCATCAACACC 60.251 55.000 0.00 0.00 0.00 4.16
114 115 0.251297 CTTCCCCTGCATCAACACCA 60.251 55.000 0.00 0.00 0.00 4.17
115 116 0.409092 TTCCCCTGCATCAACACCAT 59.591 50.000 0.00 0.00 0.00 3.55
116 117 0.323633 TCCCCTGCATCAACACCATG 60.324 55.000 0.00 0.00 0.00 3.66
117 118 1.324740 CCCCTGCATCAACACCATGG 61.325 60.000 11.19 11.19 0.00 3.66
118 119 1.514087 CCTGCATCAACACCATGGC 59.486 57.895 13.04 0.00 0.00 4.40
119 120 1.514087 CTGCATCAACACCATGGCC 59.486 57.895 13.04 0.00 0.00 5.36
120 121 2.274232 CTGCATCAACACCATGGCCG 62.274 60.000 13.04 5.85 0.00 6.13
121 122 2.045708 GCATCAACACCATGGCCGA 61.046 57.895 13.04 3.35 0.00 5.54
122 123 1.802636 CATCAACACCATGGCCGAC 59.197 57.895 13.04 0.00 0.00 4.79
123 124 1.745115 ATCAACACCATGGCCGACG 60.745 57.895 13.04 0.00 0.00 5.12
124 125 2.178876 ATCAACACCATGGCCGACGA 62.179 55.000 13.04 2.55 0.00 4.20
125 126 1.745115 CAACACCATGGCCGACGAT 60.745 57.895 13.04 0.00 0.00 3.73
126 127 1.745115 AACACCATGGCCGACGATG 60.745 57.895 13.04 2.84 0.00 3.84
127 128 3.576356 CACCATGGCCGACGATGC 61.576 66.667 13.04 0.00 0.00 3.91
137 138 3.330853 GACGATGCCGCCGCTAAG 61.331 66.667 0.00 0.00 39.95 2.18
138 139 3.768185 GACGATGCCGCCGCTAAGA 62.768 63.158 0.00 0.00 39.95 2.10
139 140 2.584970 CGATGCCGCCGCTAAGAA 60.585 61.111 0.00 0.00 35.36 2.52
140 141 2.589492 CGATGCCGCCGCTAAGAAG 61.589 63.158 0.00 0.00 35.36 2.85
141 142 1.227263 GATGCCGCCGCTAAGAAGA 60.227 57.895 0.00 0.00 35.36 2.87
142 143 0.810031 GATGCCGCCGCTAAGAAGAA 60.810 55.000 0.00 0.00 35.36 2.52
143 144 0.811616 ATGCCGCCGCTAAGAAGAAG 60.812 55.000 0.00 0.00 35.36 2.85
144 145 2.174319 GCCGCCGCTAAGAAGAAGG 61.174 63.158 0.00 0.00 0.00 3.46
145 146 2.174319 CCGCCGCTAAGAAGAAGGC 61.174 63.158 0.00 0.00 41.73 4.35
146 147 2.174319 CGCCGCTAAGAAGAAGGCC 61.174 63.158 0.00 0.00 41.98 5.19
147 148 1.078426 GCCGCTAAGAAGAAGGCCA 60.078 57.895 5.01 0.00 40.26 5.36
148 149 1.369839 GCCGCTAAGAAGAAGGCCAC 61.370 60.000 5.01 0.00 40.26 5.01
149 150 1.084370 CCGCTAAGAAGAAGGCCACG 61.084 60.000 5.01 0.00 0.00 4.94
150 151 1.084370 CGCTAAGAAGAAGGCCACGG 61.084 60.000 5.01 0.00 0.00 4.94
151 152 0.249398 GCTAAGAAGAAGGCCACGGA 59.751 55.000 5.01 0.00 0.00 4.69
152 153 2.007547 GCTAAGAAGAAGGCCACGGAC 61.008 57.143 5.01 0.00 0.00 4.79
153 154 0.245539 TAAGAAGAAGGCCACGGACG 59.754 55.000 5.01 0.00 0.00 4.79
154 155 1.469335 AAGAAGAAGGCCACGGACGA 61.469 55.000 5.01 0.00 0.00 4.20
155 156 1.005394 GAAGAAGGCCACGGACGAA 60.005 57.895 5.01 0.00 0.00 3.85
156 157 1.004918 AAGAAGGCCACGGACGAAG 60.005 57.895 5.01 0.00 0.00 3.79
157 158 3.119096 GAAGGCCACGGACGAAGC 61.119 66.667 5.01 0.30 0.00 3.86
158 159 4.699522 AAGGCCACGGACGAAGCC 62.700 66.667 17.52 17.52 46.13 4.35
218 219 3.919216 CGGAGGGTATGATCTGTTCATC 58.081 50.000 4.57 0.00 44.13 2.92
219 220 3.306364 CGGAGGGTATGATCTGTTCATCC 60.306 52.174 4.57 6.58 44.13 3.51
220 221 3.008485 GGAGGGTATGATCTGTTCATCCC 59.992 52.174 18.64 18.64 44.13 3.85
221 222 3.946824 AGGGTATGATCTGTTCATCCCT 58.053 45.455 21.00 21.00 46.65 4.20
222 223 4.278975 GGGTATGATCTGTTCATCCCTC 57.721 50.000 18.83 6.02 44.13 4.30
223 224 3.648067 GGGTATGATCTGTTCATCCCTCA 59.352 47.826 18.83 0.00 44.13 3.86
224 225 4.503991 GGGTATGATCTGTTCATCCCTCAC 60.504 50.000 18.83 8.44 44.13 3.51
225 226 4.346418 GGTATGATCTGTTCATCCCTCACT 59.654 45.833 4.57 0.00 44.13 3.41
226 227 5.163258 GGTATGATCTGTTCATCCCTCACTT 60.163 44.000 4.57 0.00 44.13 3.16
227 228 6.042093 GGTATGATCTGTTCATCCCTCACTTA 59.958 42.308 4.57 0.00 44.13 2.24
228 229 5.344743 TGATCTGTTCATCCCTCACTTAC 57.655 43.478 0.00 0.00 0.00 2.34
229 230 5.026121 TGATCTGTTCATCCCTCACTTACT 58.974 41.667 0.00 0.00 0.00 2.24
230 231 5.127845 TGATCTGTTCATCCCTCACTTACTC 59.872 44.000 0.00 0.00 0.00 2.59
231 232 3.444034 TCTGTTCATCCCTCACTTACTCG 59.556 47.826 0.00 0.00 0.00 4.18
232 233 3.162666 TGTTCATCCCTCACTTACTCGT 58.837 45.455 0.00 0.00 0.00 4.18
233 234 3.056821 TGTTCATCCCTCACTTACTCGTG 60.057 47.826 0.00 0.00 36.25 4.35
234 235 1.476891 TCATCCCTCACTTACTCGTGC 59.523 52.381 0.00 0.00 34.92 5.34
235 236 1.478510 CATCCCTCACTTACTCGTGCT 59.521 52.381 0.00 0.00 34.92 4.40
236 237 1.629043 TCCCTCACTTACTCGTGCTT 58.371 50.000 0.00 0.00 34.92 3.91
237 238 2.799017 TCCCTCACTTACTCGTGCTTA 58.201 47.619 0.00 0.00 34.92 3.09
238 239 3.362706 TCCCTCACTTACTCGTGCTTAT 58.637 45.455 0.00 0.00 34.92 1.73
239 240 3.130516 TCCCTCACTTACTCGTGCTTATG 59.869 47.826 0.00 0.00 34.92 1.90
240 241 2.860735 CCTCACTTACTCGTGCTTATGC 59.139 50.000 0.00 0.00 40.20 3.14
241 242 3.429547 CCTCACTTACTCGTGCTTATGCT 60.430 47.826 1.96 0.00 40.48 3.79
242 243 4.202020 CCTCACTTACTCGTGCTTATGCTA 60.202 45.833 1.96 0.00 40.48 3.49
243 244 4.921547 TCACTTACTCGTGCTTATGCTAG 58.078 43.478 1.96 0.00 40.48 3.42
244 245 3.487574 CACTTACTCGTGCTTATGCTAGC 59.512 47.826 8.10 8.10 41.59 3.42
245 246 2.795175 TACTCGTGCTTATGCTAGCC 57.205 50.000 13.29 0.00 40.49 3.93
246 247 0.249073 ACTCGTGCTTATGCTAGCCG 60.249 55.000 13.29 6.61 40.49 5.52
247 248 0.249073 CTCGTGCTTATGCTAGCCGT 60.249 55.000 13.29 3.40 40.49 5.68
248 249 1.001706 CTCGTGCTTATGCTAGCCGTA 60.002 52.381 13.29 2.31 40.49 4.02
249 250 1.611977 TCGTGCTTATGCTAGCCGTAT 59.388 47.619 13.29 1.33 40.49 3.06
250 251 2.815503 TCGTGCTTATGCTAGCCGTATA 59.184 45.455 13.29 0.23 40.49 1.47
251 252 3.442625 TCGTGCTTATGCTAGCCGTATAT 59.557 43.478 13.29 0.50 40.49 0.86
252 253 3.547868 CGTGCTTATGCTAGCCGTATATG 59.452 47.826 13.29 7.10 40.49 1.78
253 254 4.495422 GTGCTTATGCTAGCCGTATATGT 58.505 43.478 13.29 0.00 40.49 2.29
254 255 4.327357 GTGCTTATGCTAGCCGTATATGTG 59.673 45.833 13.29 0.00 40.49 3.21
255 256 3.307242 GCTTATGCTAGCCGTATATGTGC 59.693 47.826 13.29 4.12 35.06 4.57
256 257 4.748892 CTTATGCTAGCCGTATATGTGCT 58.251 43.478 13.29 11.23 39.10 4.40
257 258 2.438868 TGCTAGCCGTATATGTGCTG 57.561 50.000 13.29 8.33 36.57 4.41
258 259 1.071605 GCTAGCCGTATATGTGCTGC 58.928 55.000 2.29 12.43 36.57 5.25
259 260 1.605457 GCTAGCCGTATATGTGCTGCA 60.605 52.381 2.29 0.00 36.57 4.41
260 261 2.061773 CTAGCCGTATATGTGCTGCAC 58.938 52.381 25.15 25.15 36.57 4.57
270 271 2.495155 TGTGCTGCACATAGATGGTT 57.505 45.000 29.99 0.00 39.62 3.67
271 272 2.794103 TGTGCTGCACATAGATGGTTT 58.206 42.857 29.99 0.00 39.62 3.27
272 273 2.488937 TGTGCTGCACATAGATGGTTTG 59.511 45.455 29.99 0.00 39.62 2.93
273 274 1.473677 TGCTGCACATAGATGGTTTGC 59.526 47.619 0.00 0.00 0.00 3.68
274 275 1.747355 GCTGCACATAGATGGTTTGCT 59.253 47.619 0.00 0.00 34.18 3.91
275 276 2.165030 GCTGCACATAGATGGTTTGCTT 59.835 45.455 0.00 0.00 34.18 3.91
276 277 3.733077 GCTGCACATAGATGGTTTGCTTC 60.733 47.826 0.00 0.00 34.18 3.86
277 278 3.689347 TGCACATAGATGGTTTGCTTCT 58.311 40.909 5.51 0.00 34.18 2.85
278 279 4.842574 TGCACATAGATGGTTTGCTTCTA 58.157 39.130 5.51 0.00 34.18 2.10
279 280 5.439721 TGCACATAGATGGTTTGCTTCTAT 58.560 37.500 5.51 0.00 33.92 1.98
284 285 7.798596 CATAGATGGTTTGCTTCTATGTTCT 57.201 36.000 9.83 0.00 41.96 3.01
285 286 7.637229 CATAGATGGTTTGCTTCTATGTTCTG 58.363 38.462 9.83 0.00 41.96 3.02
286 287 5.564550 AGATGGTTTGCTTCTATGTTCTGT 58.435 37.500 0.00 0.00 0.00 3.41
287 288 6.711277 AGATGGTTTGCTTCTATGTTCTGTA 58.289 36.000 0.00 0.00 0.00 2.74
288 289 6.595716 AGATGGTTTGCTTCTATGTTCTGTAC 59.404 38.462 0.00 0.00 0.00 2.90
289 290 4.688879 TGGTTTGCTTCTATGTTCTGTACG 59.311 41.667 0.00 0.00 0.00 3.67
290 291 4.689345 GGTTTGCTTCTATGTTCTGTACGT 59.311 41.667 0.00 0.00 0.00 3.57
291 292 5.389516 GGTTTGCTTCTATGTTCTGTACGTG 60.390 44.000 0.00 0.00 0.00 4.49
292 293 3.250744 TGCTTCTATGTTCTGTACGTGC 58.749 45.455 0.00 0.00 0.00 5.34
293 294 3.056821 TGCTTCTATGTTCTGTACGTGCT 60.057 43.478 4.97 0.00 0.00 4.40
294 295 4.157105 TGCTTCTATGTTCTGTACGTGCTA 59.843 41.667 4.97 0.00 0.00 3.49
295 296 4.735822 GCTTCTATGTTCTGTACGTGCTAG 59.264 45.833 4.97 1.14 0.00 3.42
296 297 5.676584 GCTTCTATGTTCTGTACGTGCTAGT 60.677 44.000 4.97 0.00 0.00 2.57
297 298 6.457934 GCTTCTATGTTCTGTACGTGCTAGTA 60.458 42.308 4.97 0.00 0.00 1.82
298 299 7.563888 TTCTATGTTCTGTACGTGCTAGTAT 57.436 36.000 4.97 0.00 0.00 2.12
299 300 6.956047 TCTATGTTCTGTACGTGCTAGTATG 58.044 40.000 4.97 0.00 0.00 2.39
300 301 5.578005 ATGTTCTGTACGTGCTAGTATGT 57.422 39.130 10.68 10.68 0.00 2.29
301 302 5.381174 TGTTCTGTACGTGCTAGTATGTT 57.619 39.130 11.13 0.00 0.00 2.71
302 303 5.775686 TGTTCTGTACGTGCTAGTATGTTT 58.224 37.500 11.13 0.00 0.00 2.83
303 304 6.912082 TGTTCTGTACGTGCTAGTATGTTTA 58.088 36.000 11.13 0.66 0.00 2.01
304 305 7.025365 TGTTCTGTACGTGCTAGTATGTTTAG 58.975 38.462 11.13 9.78 0.00 1.85
305 306 6.127810 TCTGTACGTGCTAGTATGTTTAGG 57.872 41.667 11.13 0.98 0.00 2.69
306 307 5.882000 TCTGTACGTGCTAGTATGTTTAGGA 59.118 40.000 11.13 3.11 0.00 2.94
307 308 6.375174 TCTGTACGTGCTAGTATGTTTAGGAA 59.625 38.462 11.13 0.00 0.00 3.36
308 309 7.067859 TCTGTACGTGCTAGTATGTTTAGGAAT 59.932 37.037 11.13 0.00 0.00 3.01
309 310 7.198390 TGTACGTGCTAGTATGTTTAGGAATC 58.802 38.462 11.13 0.00 0.00 2.52
310 311 5.279384 ACGTGCTAGTATGTTTAGGAATCG 58.721 41.667 0.00 0.00 0.00 3.34
311 312 4.680110 CGTGCTAGTATGTTTAGGAATCGG 59.320 45.833 0.00 0.00 0.00 4.18
312 313 5.598769 GTGCTAGTATGTTTAGGAATCGGT 58.401 41.667 0.00 0.00 0.00 4.69
313 314 6.513884 CGTGCTAGTATGTTTAGGAATCGGTA 60.514 42.308 0.00 0.00 0.00 4.02
314 315 7.376615 GTGCTAGTATGTTTAGGAATCGGTAT 58.623 38.462 0.00 0.00 0.00 2.73
315 316 7.328737 GTGCTAGTATGTTTAGGAATCGGTATG 59.671 40.741 0.00 0.00 0.00 2.39
316 317 7.231925 TGCTAGTATGTTTAGGAATCGGTATGA 59.768 37.037 0.00 0.00 0.00 2.15
317 318 7.755822 GCTAGTATGTTTAGGAATCGGTATGAG 59.244 40.741 0.00 0.00 0.00 2.90
318 319 7.834881 AGTATGTTTAGGAATCGGTATGAGA 57.165 36.000 0.00 0.00 0.00 3.27
319 320 8.423906 AGTATGTTTAGGAATCGGTATGAGAT 57.576 34.615 0.00 0.00 0.00 2.75
320 321 8.307483 AGTATGTTTAGGAATCGGTATGAGATG 58.693 37.037 0.00 0.00 0.00 2.90
321 322 5.297547 TGTTTAGGAATCGGTATGAGATGC 58.702 41.667 0.00 0.00 0.00 3.91
322 323 5.163353 TGTTTAGGAATCGGTATGAGATGCA 60.163 40.000 0.00 0.00 0.00 3.96
323 324 5.745312 TTAGGAATCGGTATGAGATGCAT 57.255 39.130 0.00 0.00 41.08 3.96
324 325 6.850752 TTAGGAATCGGTATGAGATGCATA 57.149 37.500 0.00 0.00 38.44 3.14
335 336 3.138304 TGAGATGCATACCGTATTTGCC 58.862 45.455 0.00 0.00 35.51 4.52
336 337 3.138304 GAGATGCATACCGTATTTGCCA 58.862 45.455 0.00 0.00 35.51 4.92
337 338 3.753272 GAGATGCATACCGTATTTGCCAT 59.247 43.478 0.00 0.00 35.51 4.40
338 339 3.503363 AGATGCATACCGTATTTGCCATG 59.497 43.478 0.00 0.00 35.51 3.66
339 340 1.336440 TGCATACCGTATTTGCCATGC 59.664 47.619 2.43 0.00 39.32 4.06
340 341 1.608590 GCATACCGTATTTGCCATGCT 59.391 47.619 0.00 0.00 36.66 3.79
341 342 2.034558 GCATACCGTATTTGCCATGCTT 59.965 45.455 0.00 0.00 36.66 3.91
342 343 3.252215 GCATACCGTATTTGCCATGCTTA 59.748 43.478 0.00 0.00 36.66 3.09
343 344 4.783242 CATACCGTATTTGCCATGCTTAC 58.217 43.478 0.00 0.00 0.00 2.34
344 345 2.999331 ACCGTATTTGCCATGCTTACT 58.001 42.857 0.00 0.00 0.00 2.24
345 346 2.682856 ACCGTATTTGCCATGCTTACTG 59.317 45.455 0.00 0.00 0.00 2.74
346 347 2.682856 CCGTATTTGCCATGCTTACTGT 59.317 45.455 0.00 0.00 0.00 3.55
347 348 3.128589 CCGTATTTGCCATGCTTACTGTT 59.871 43.478 0.00 0.00 0.00 3.16
348 349 4.380444 CCGTATTTGCCATGCTTACTGTTT 60.380 41.667 0.00 0.00 0.00 2.83
349 350 5.163703 CCGTATTTGCCATGCTTACTGTTTA 60.164 40.000 0.00 0.00 0.00 2.01
350 351 5.737290 CGTATTTGCCATGCTTACTGTTTAC 59.263 40.000 0.00 0.00 0.00 2.01
351 352 5.982890 ATTTGCCATGCTTACTGTTTACT 57.017 34.783 0.00 0.00 0.00 2.24
352 353 5.371115 TTTGCCATGCTTACTGTTTACTC 57.629 39.130 0.00 0.00 0.00 2.59
353 354 3.000041 TGCCATGCTTACTGTTTACTCG 59.000 45.455 0.00 0.00 0.00 4.18
354 355 3.000727 GCCATGCTTACTGTTTACTCGT 58.999 45.455 0.00 0.00 0.00 4.18
355 356 3.181520 GCCATGCTTACTGTTTACTCGTG 60.182 47.826 0.00 0.00 0.00 4.35
356 357 3.370978 CCATGCTTACTGTTTACTCGTGG 59.629 47.826 0.00 0.00 0.00 4.94
357 358 4.242475 CATGCTTACTGTTTACTCGTGGA 58.758 43.478 0.00 0.00 0.00 4.02
358 359 4.530710 TGCTTACTGTTTACTCGTGGAT 57.469 40.909 0.00 0.00 0.00 3.41
359 360 4.890088 TGCTTACTGTTTACTCGTGGATT 58.110 39.130 0.00 0.00 0.00 3.01
360 361 6.028146 TGCTTACTGTTTACTCGTGGATTA 57.972 37.500 0.00 0.00 0.00 1.75
361 362 6.097356 TGCTTACTGTTTACTCGTGGATTAG 58.903 40.000 0.00 0.00 0.00 1.73
362 363 6.098017 GCTTACTGTTTACTCGTGGATTAGT 58.902 40.000 0.00 0.00 0.00 2.24
363 364 6.253083 GCTTACTGTTTACTCGTGGATTAGTC 59.747 42.308 0.00 0.00 0.00 2.59
364 365 5.979288 ACTGTTTACTCGTGGATTAGTCT 57.021 39.130 0.00 0.00 0.00 3.24
365 366 8.565896 TTACTGTTTACTCGTGGATTAGTCTA 57.434 34.615 0.00 0.00 0.00 2.59
366 367 7.458409 ACTGTTTACTCGTGGATTAGTCTAA 57.542 36.000 0.00 0.00 0.00 2.10
367 368 8.064336 ACTGTTTACTCGTGGATTAGTCTAAT 57.936 34.615 4.71 4.71 0.00 1.73
368 369 7.974501 ACTGTTTACTCGTGGATTAGTCTAATG 59.025 37.037 9.90 0.00 0.00 1.90
369 370 7.262772 TGTTTACTCGTGGATTAGTCTAATGG 58.737 38.462 9.90 0.00 0.00 3.16
370 371 4.939052 ACTCGTGGATTAGTCTAATGGG 57.061 45.455 9.90 0.00 0.00 4.00
371 372 4.543689 ACTCGTGGATTAGTCTAATGGGA 58.456 43.478 9.90 1.70 0.00 4.37
372 373 4.960469 ACTCGTGGATTAGTCTAATGGGAA 59.040 41.667 9.90 0.00 0.00 3.97
373 374 5.424252 ACTCGTGGATTAGTCTAATGGGAAA 59.576 40.000 9.90 0.00 0.00 3.13
374 375 6.070424 ACTCGTGGATTAGTCTAATGGGAAAA 60.070 38.462 9.90 0.00 0.00 2.29
375 376 6.346096 TCGTGGATTAGTCTAATGGGAAAAG 58.654 40.000 9.90 0.00 0.00 2.27
376 377 6.070424 TCGTGGATTAGTCTAATGGGAAAAGT 60.070 38.462 9.90 0.00 0.00 2.66
377 378 6.037172 CGTGGATTAGTCTAATGGGAAAAGTG 59.963 42.308 9.90 0.00 0.00 3.16
378 379 5.885912 TGGATTAGTCTAATGGGAAAAGTGC 59.114 40.000 9.90 0.00 0.00 4.40
379 380 6.122964 GGATTAGTCTAATGGGAAAAGTGCT 58.877 40.000 9.90 0.00 0.00 4.40
380 381 7.092623 TGGATTAGTCTAATGGGAAAAGTGCTA 60.093 37.037 9.90 0.00 0.00 3.49
381 382 7.773690 GGATTAGTCTAATGGGAAAAGTGCTAA 59.226 37.037 9.90 0.00 0.00 3.09
382 383 9.343539 GATTAGTCTAATGGGAAAAGTGCTAAT 57.656 33.333 9.90 0.00 0.00 1.73
386 387 9.700831 AGTCTAATGGGAAAAGTGCTAATATTT 57.299 29.630 0.00 0.00 0.00 1.40
387 388 9.952188 GTCTAATGGGAAAAGTGCTAATATTTC 57.048 33.333 0.00 0.00 0.00 2.17
388 389 9.131791 TCTAATGGGAAAAGTGCTAATATTTCC 57.868 33.333 7.44 7.44 46.45 3.13
393 394 7.812309 GGAAAAGTGCTAATATTTCCAACAC 57.188 36.000 10.41 0.00 46.43 3.32
394 395 7.375053 GGAAAAGTGCTAATATTTCCAACACA 58.625 34.615 10.41 0.00 46.43 3.72
395 396 8.034804 GGAAAAGTGCTAATATTTCCAACACAT 58.965 33.333 10.41 0.00 46.43 3.21
396 397 9.423061 GAAAAGTGCTAATATTTCCAACACATT 57.577 29.630 0.00 0.00 0.00 2.71
397 398 8.986477 AAAGTGCTAATATTTCCAACACATTC 57.014 30.769 0.00 0.00 0.00 2.67
398 399 7.100458 AGTGCTAATATTTCCAACACATTCC 57.900 36.000 0.00 0.00 0.00 3.01
399 400 6.663093 AGTGCTAATATTTCCAACACATTCCA 59.337 34.615 0.00 0.00 0.00 3.53
400 401 7.342799 AGTGCTAATATTTCCAACACATTCCAT 59.657 33.333 0.00 0.00 0.00 3.41
401 402 7.436080 GTGCTAATATTTCCAACACATTCCATG 59.564 37.037 0.00 0.00 0.00 3.66
402 403 7.341512 TGCTAATATTTCCAACACATTCCATGA 59.658 33.333 0.00 0.00 0.00 3.07
403 404 8.362639 GCTAATATTTCCAACACATTCCATGAT 58.637 33.333 0.00 0.00 0.00 2.45
406 407 9.425248 AATATTTCCAACACATTCCATGATACT 57.575 29.630 0.00 0.00 0.00 2.12
408 409 8.821686 ATTTCCAACACATTCCATGATACTAA 57.178 30.769 0.00 0.00 0.00 2.24
409 410 7.624360 TTCCAACACATTCCATGATACTAAC 57.376 36.000 0.00 0.00 0.00 2.34
410 411 6.957631 TCCAACACATTCCATGATACTAACT 58.042 36.000 0.00 0.00 0.00 2.24
411 412 7.402054 TCCAACACATTCCATGATACTAACTT 58.598 34.615 0.00 0.00 0.00 2.66
412 413 8.544622 TCCAACACATTCCATGATACTAACTTA 58.455 33.333 0.00 0.00 0.00 2.24
413 414 8.830580 CCAACACATTCCATGATACTAACTTAG 58.169 37.037 0.00 0.00 0.00 2.18
414 415 9.383519 CAACACATTCCATGATACTAACTTAGT 57.616 33.333 6.68 6.68 42.68 2.24
415 416 9.959721 AACACATTCCATGATACTAACTTAGTT 57.040 29.630 6.77 2.32 40.14 2.24
430 431 9.933240 ACTAACTTAGTTATCATACTACCCACT 57.067 33.333 5.21 0.00 34.86 4.00
433 434 8.703378 ACTTAGTTATCATACTACCCACTACC 57.297 38.462 0.00 0.00 30.62 3.18
434 435 8.509441 ACTTAGTTATCATACTACCCACTACCT 58.491 37.037 0.00 0.00 30.62 3.08
435 436 8.930846 TTAGTTATCATACTACCCACTACCTC 57.069 38.462 0.00 0.00 30.62 3.85
436 437 6.313324 AGTTATCATACTACCCACTACCTCC 58.687 44.000 0.00 0.00 0.00 4.30
437 438 3.219176 TCATACTACCCACTACCTCCG 57.781 52.381 0.00 0.00 0.00 4.63
438 439 2.511218 TCATACTACCCACTACCTCCGT 59.489 50.000 0.00 0.00 0.00 4.69
439 440 3.716353 TCATACTACCCACTACCTCCGTA 59.284 47.826 0.00 0.00 0.00 4.02
440 441 4.165950 TCATACTACCCACTACCTCCGTAA 59.834 45.833 0.00 0.00 0.00 3.18
441 442 3.677156 ACTACCCACTACCTCCGTAAT 57.323 47.619 0.00 0.00 0.00 1.89
442 443 3.986435 ACTACCCACTACCTCCGTAATT 58.014 45.455 0.00 0.00 0.00 1.40
443 444 4.356436 ACTACCCACTACCTCCGTAATTT 58.644 43.478 0.00 0.00 0.00 1.82
444 445 3.622166 ACCCACTACCTCCGTAATTTG 57.378 47.619 0.00 0.00 0.00 2.32
445 446 3.175594 ACCCACTACCTCCGTAATTTGA 58.824 45.455 0.00 0.00 0.00 2.69
446 447 3.583966 ACCCACTACCTCCGTAATTTGAA 59.416 43.478 0.00 0.00 0.00 2.69
447 448 4.041938 ACCCACTACCTCCGTAATTTGAAA 59.958 41.667 0.00 0.00 0.00 2.69
448 449 5.005094 CCCACTACCTCCGTAATTTGAAAA 58.995 41.667 0.00 0.00 0.00 2.29
449 450 5.123344 CCCACTACCTCCGTAATTTGAAAAG 59.877 44.000 0.00 0.00 0.00 2.27
450 451 5.391629 CCACTACCTCCGTAATTTGAAAAGC 60.392 44.000 0.00 0.00 0.00 3.51
451 452 5.180492 CACTACCTCCGTAATTTGAAAAGCA 59.820 40.000 0.00 0.00 0.00 3.91
452 453 5.766174 ACTACCTCCGTAATTTGAAAAGCAA 59.234 36.000 0.00 0.00 33.88 3.91
534 535 7.933728 CAATGAATCAACATTGTTCTCAACA 57.066 32.000 11.64 0.00 46.64 3.33
535 536 7.780313 CAATGAATCAACATTGTTCTCAACAC 58.220 34.615 11.64 0.00 46.64 3.32
536 537 6.698008 TGAATCAACATTGTTCTCAACACT 57.302 33.333 0.00 0.00 41.97 3.55
537 538 7.800155 TGAATCAACATTGTTCTCAACACTA 57.200 32.000 0.00 0.00 41.97 2.74
538 539 7.864686 TGAATCAACATTGTTCTCAACACTAG 58.135 34.615 0.00 0.00 41.97 2.57
539 540 7.498900 TGAATCAACATTGTTCTCAACACTAGT 59.501 33.333 0.00 0.00 41.97 2.57
540 541 8.902540 AATCAACATTGTTCTCAACACTAGTA 57.097 30.769 0.00 0.00 41.97 1.82
541 542 7.946655 TCAACATTGTTCTCAACACTAGTAG 57.053 36.000 0.00 0.00 41.97 2.57
542 543 7.497595 TCAACATTGTTCTCAACACTAGTAGT 58.502 34.615 0.00 0.00 41.97 2.73
543 544 8.635328 TCAACATTGTTCTCAACACTAGTAGTA 58.365 33.333 1.57 0.00 41.97 1.82
544 545 9.424319 CAACATTGTTCTCAACACTAGTAGTAT 57.576 33.333 1.57 0.00 41.97 2.12
545 546 9.998106 AACATTGTTCTCAACACTAGTAGTATT 57.002 29.630 1.57 0.00 41.97 1.89
546 547 9.998106 ACATTGTTCTCAACACTAGTAGTATTT 57.002 29.630 1.57 0.00 41.97 1.40
549 550 9.692749 TTGTTCTCAACACTAGTAGTATTTCTG 57.307 33.333 1.57 0.00 41.97 3.02
550 551 9.074576 TGTTCTCAACACTAGTAGTATTTCTGA 57.925 33.333 1.57 1.48 36.25 3.27
609 610 6.560253 ACGATAGAGAAGTGCAATTTTTGT 57.440 33.333 0.00 0.00 41.38 2.83
610 611 6.373779 ACGATAGAGAAGTGCAATTTTTGTG 58.626 36.000 0.00 0.00 41.38 3.33
635 639 2.163010 GTGCTCGCACAGTTAGTACCTA 59.837 50.000 16.52 0.00 45.53 3.08
670 674 7.675962 AATCGTTTGCAATAACTGTACCTTA 57.324 32.000 0.00 0.00 0.00 2.69
723 727 1.597461 GACGGCAAGCCCTTACTCT 59.403 57.895 5.34 0.00 0.00 3.24
785 789 3.851098 AGTCTAGAACGGCAATCACTTC 58.149 45.455 0.00 0.00 0.00 3.01
794 800 2.352715 CGGCAATCACTTCCCCTTTTTC 60.353 50.000 0.00 0.00 0.00 2.29
862 868 1.526225 GAGCTATTTGCCCCCGACC 60.526 63.158 0.00 0.00 44.23 4.79
876 893 1.086696 CCGACCACAACATTAGCCAG 58.913 55.000 0.00 0.00 0.00 4.85
906 923 3.395941 ACAACCTTTCTTCATCCCACTCT 59.604 43.478 0.00 0.00 0.00 3.24
994 1017 1.537643 CCCTGATCCTCCCTAGGCC 60.538 68.421 2.05 0.00 43.31 5.19
1073 1102 3.186283 TGTCCCTTTAGTCCTTGCCATA 58.814 45.455 0.00 0.00 0.00 2.74
1184 1213 5.065731 CAGGCTCCTGAATGAGATAAAACAC 59.934 44.000 10.33 0.00 46.30 3.32
1295 1451 1.227674 CTCCATGGGCTACTTCGGC 60.228 63.158 13.02 0.00 0.00 5.54
1310 1466 2.466982 CGGCGGTCGCTACTCACTA 61.467 63.158 15.04 0.00 41.60 2.74
1311 1467 1.063811 GGCGGTCGCTACTCACTAC 59.936 63.158 15.04 0.00 41.60 2.73
1390 1546 3.036084 CGTTGCCGACGTGCTTCT 61.036 61.111 0.00 0.00 46.49 2.85
1522 1678 9.469807 CTACCTTTATCTGAATAGTTAGCACTG 57.530 37.037 0.00 0.00 34.06 3.66
1690 1846 8.246871 TGATGTACTCACTGTTAGAGAAAGATG 58.753 37.037 2.52 0.00 36.91 2.90
1763 1923 5.790593 TGTCAATACAACTTCAGTACTCCC 58.209 41.667 0.00 0.00 30.91 4.30
1764 1924 5.176592 GTCAATACAACTTCAGTACTCCCC 58.823 45.833 0.00 0.00 0.00 4.81
1765 1925 4.081862 TCAATACAACTTCAGTACTCCCCG 60.082 45.833 0.00 0.00 0.00 5.73
1766 1926 0.320697 ACAACTTCAGTACTCCCCGC 59.679 55.000 0.00 0.00 0.00 6.13
1767 1927 0.320374 CAACTTCAGTACTCCCCGCA 59.680 55.000 0.00 0.00 0.00 5.69
1768 1928 1.053424 AACTTCAGTACTCCCCGCAA 58.947 50.000 0.00 0.00 0.00 4.85
1769 1929 1.053424 ACTTCAGTACTCCCCGCAAA 58.947 50.000 0.00 0.00 0.00 3.68
1770 1930 1.418637 ACTTCAGTACTCCCCGCAAAA 59.581 47.619 0.00 0.00 0.00 2.44
1771 1931 2.158726 ACTTCAGTACTCCCCGCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
1801 1961 5.298347 ACAACTTCAGTACCACTTAAGAGC 58.702 41.667 10.09 0.00 34.10 4.09
1840 2004 9.823647 TTCTCTATAATTTAGAGGAGCAAACAG 57.176 33.333 17.34 0.00 40.95 3.16
1841 2005 9.201989 TCTCTATAATTTAGAGGAGCAAACAGA 57.798 33.333 17.34 0.00 40.95 3.41
1894 2058 5.820947 TCCTCTGAAAAAGTGTGGTTTCTAC 59.179 40.000 0.00 0.00 35.26 2.59
1895 2059 5.008712 CCTCTGAAAAAGTGTGGTTTCTACC 59.991 44.000 0.00 0.00 45.26 3.18
1896 2060 4.885325 TCTGAAAAAGTGTGGTTTCTACCC 59.115 41.667 0.00 0.00 44.35 3.69
1897 2061 4.601084 TGAAAAAGTGTGGTTTCTACCCA 58.399 39.130 0.00 0.00 44.35 4.51
1898 2062 4.642885 TGAAAAAGTGTGGTTTCTACCCAG 59.357 41.667 0.00 0.00 44.35 4.45
1899 2063 2.271944 AAGTGTGGTTTCTACCCAGC 57.728 50.000 0.00 0.00 44.35 4.85
1900 2064 1.136828 AGTGTGGTTTCTACCCAGCA 58.863 50.000 0.00 0.00 44.35 4.41
1901 2065 1.493022 AGTGTGGTTTCTACCCAGCAA 59.507 47.619 0.00 0.00 44.35 3.91
1902 2066 2.092103 AGTGTGGTTTCTACCCAGCAAA 60.092 45.455 0.00 0.00 44.35 3.68
1903 2067 2.691011 GTGTGGTTTCTACCCAGCAAAA 59.309 45.455 0.00 0.00 44.35 2.44
1904 2068 3.131400 GTGTGGTTTCTACCCAGCAAAAA 59.869 43.478 0.00 0.00 44.35 1.94
1951 2115 1.053424 ACCGCTAAACTGAACCCTCA 58.947 50.000 0.00 0.00 0.00 3.86
2010 2179 1.333308 GCAGCACACACAACACACATA 59.667 47.619 0.00 0.00 0.00 2.29
2014 2183 3.441922 AGCACACACAACACACATACAAA 59.558 39.130 0.00 0.00 0.00 2.83
2120 4398 2.097466 CACCAATGCTCCCGTTTACATC 59.903 50.000 0.00 0.00 0.00 3.06
2138 4416 1.002250 TCAACGACGAGCTTCTTCGC 61.002 55.000 0.00 0.00 41.11 4.70
2144 4422 2.022129 CGAGCTTCTTCGCCAACGT 61.022 57.895 0.00 0.00 41.18 3.99
2175 4453 3.825014 GGATAGTACCACCTCGCTATCAA 59.175 47.826 11.09 0.00 40.69 2.57
2191 4469 5.669477 GCTATCAACCAAGAACAGATCTCT 58.331 41.667 0.00 0.00 37.42 3.10
2195 4473 4.838423 TCAACCAAGAACAGATCTCTGGTA 59.162 41.667 11.66 0.63 45.35 3.25
2216 4494 1.571460 CGTGTTGTCCTCTGCAAGC 59.429 57.895 0.00 0.00 0.00 4.01
2300 4578 3.821600 GAGCTCCTCCATATCTACGTTCA 59.178 47.826 0.87 0.00 0.00 3.18
2308 4586 6.986817 CCTCCATATCTACGTTCAATCACTTT 59.013 38.462 0.00 0.00 0.00 2.66
2310 4588 6.984474 TCCATATCTACGTTCAATCACTTTCC 59.016 38.462 0.00 0.00 0.00 3.13
2311 4589 6.074302 CCATATCTACGTTCAATCACTTTCCG 60.074 42.308 0.00 0.00 0.00 4.30
2312 4590 3.581755 TCTACGTTCAATCACTTTCCGG 58.418 45.455 0.00 0.00 0.00 5.14
2313 4591 2.536761 ACGTTCAATCACTTTCCGGA 57.463 45.000 0.00 0.00 0.00 5.14
2314 4592 2.413837 ACGTTCAATCACTTTCCGGAG 58.586 47.619 3.34 0.00 0.00 4.63
2315 4593 1.128692 CGTTCAATCACTTTCCGGAGC 59.871 52.381 3.34 0.00 0.00 4.70
2316 4594 2.427506 GTTCAATCACTTTCCGGAGCT 58.572 47.619 3.34 0.00 0.00 4.09
2317 4595 2.099141 TCAATCACTTTCCGGAGCTG 57.901 50.000 3.34 1.16 0.00 4.24
2318 4596 0.449388 CAATCACTTTCCGGAGCTGC 59.551 55.000 3.34 0.00 0.00 5.25
2319 4597 0.326264 AATCACTTTCCGGAGCTGCT 59.674 50.000 3.34 0.00 0.00 4.24
2320 4598 1.195115 ATCACTTTCCGGAGCTGCTA 58.805 50.000 3.34 0.00 0.00 3.49
2321 4599 0.246635 TCACTTTCCGGAGCTGCTAC 59.753 55.000 3.34 0.33 0.00 3.58
2322 4600 0.741221 CACTTTCCGGAGCTGCTACC 60.741 60.000 3.34 7.15 0.00 3.18
2323 4601 1.192146 ACTTTCCGGAGCTGCTACCA 61.192 55.000 3.34 0.00 0.00 3.25
2324 4602 0.460987 CTTTCCGGAGCTGCTACCAG 60.461 60.000 3.34 0.00 42.13 4.00
2325 4603 1.899437 TTTCCGGAGCTGCTACCAGG 61.899 60.000 3.34 12.57 39.54 4.45
2326 4604 2.759973 CCGGAGCTGCTACCAGGA 60.760 66.667 6.24 0.00 39.54 3.86
2327 4605 2.790791 CCGGAGCTGCTACCAGGAG 61.791 68.421 6.24 0.00 39.54 3.69
2328 4606 2.055042 CGGAGCTGCTACCAGGAGT 61.055 63.158 6.24 0.00 39.54 3.85
2329 4607 1.608717 CGGAGCTGCTACCAGGAGTT 61.609 60.000 6.24 0.00 39.54 3.01
2330 4608 0.107945 GGAGCTGCTACCAGGAGTTG 60.108 60.000 0.15 0.00 39.54 3.16
2338 4616 2.436109 CCAGGAGTTGGTGGGGTG 59.564 66.667 0.00 0.00 42.41 4.61
2339 4617 2.282462 CAGGAGTTGGTGGGGTGC 60.282 66.667 0.00 0.00 0.00 5.01
2340 4618 2.776526 AGGAGTTGGTGGGGTGCA 60.777 61.111 0.00 0.00 0.00 4.57
2341 4619 2.282462 GGAGTTGGTGGGGTGCAG 60.282 66.667 0.00 0.00 0.00 4.41
2342 4620 2.515901 GAGTTGGTGGGGTGCAGT 59.484 61.111 0.00 0.00 0.00 4.40
2343 4621 1.600916 GAGTTGGTGGGGTGCAGTC 60.601 63.158 0.00 0.00 0.00 3.51
2344 4622 2.978010 GTTGGTGGGGTGCAGTCG 60.978 66.667 0.00 0.00 0.00 4.18
2345 4623 4.263572 TTGGTGGGGTGCAGTCGG 62.264 66.667 0.00 0.00 0.00 4.79
2350 4628 4.699522 GGGGTGCAGTCGGGTGTC 62.700 72.222 0.00 0.00 0.00 3.67
2352 4630 3.986006 GGTGCAGTCGGGTGTCGA 61.986 66.667 0.00 0.00 46.77 4.20
2380 4711 4.741239 GAGGGGAGGAGGGCCACA 62.741 72.222 6.18 0.00 36.29 4.17
2394 4725 1.218316 CCACAAGGCTAGGGACGAC 59.782 63.158 0.00 0.00 0.00 4.34
2482 5937 0.179084 GATCTCGCCGGAATTGGACA 60.179 55.000 5.05 0.00 0.00 4.02
2514 5969 1.982938 AGGGCTACAGGGTGTCGAC 60.983 63.158 9.11 9.11 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.668419 CTTATTGCCGTTCTCCTGGG 58.332 55.000 0.00 0.00 0.00 4.45
7 8 2.403252 ACCTTATTGCCGTTCTCCTG 57.597 50.000 0.00 0.00 0.00 3.86
8 9 3.434940 AAACCTTATTGCCGTTCTCCT 57.565 42.857 0.00 0.00 0.00 3.69
9 10 4.234574 CAAAAACCTTATTGCCGTTCTCC 58.765 43.478 0.00 0.00 0.00 3.71
10 11 4.234574 CCAAAAACCTTATTGCCGTTCTC 58.765 43.478 0.00 0.00 0.00 2.87
11 12 3.006430 CCCAAAAACCTTATTGCCGTTCT 59.994 43.478 0.00 0.00 0.00 3.01
12 13 3.322369 CCCAAAAACCTTATTGCCGTTC 58.678 45.455 0.00 0.00 0.00 3.95
13 14 2.037902 CCCCAAAAACCTTATTGCCGTT 59.962 45.455 0.00 0.00 0.00 4.44
14 15 1.621317 CCCCAAAAACCTTATTGCCGT 59.379 47.619 0.00 0.00 0.00 5.68
15 16 1.896465 TCCCCAAAAACCTTATTGCCG 59.104 47.619 0.00 0.00 0.00 5.69
16 17 2.354704 GCTCCCCAAAAACCTTATTGCC 60.355 50.000 0.00 0.00 0.00 4.52
17 18 2.673893 CGCTCCCCAAAAACCTTATTGC 60.674 50.000 0.00 0.00 0.00 3.56
18 19 2.560981 ACGCTCCCCAAAAACCTTATTG 59.439 45.455 0.00 0.00 0.00 1.90
19 20 2.823747 GACGCTCCCCAAAAACCTTATT 59.176 45.455 0.00 0.00 0.00 1.40
20 21 2.041216 AGACGCTCCCCAAAAACCTTAT 59.959 45.455 0.00 0.00 0.00 1.73
21 22 1.422402 AGACGCTCCCCAAAAACCTTA 59.578 47.619 0.00 0.00 0.00 2.69
22 23 0.185175 AGACGCTCCCCAAAAACCTT 59.815 50.000 0.00 0.00 0.00 3.50
23 24 0.250770 GAGACGCTCCCCAAAAACCT 60.251 55.000 0.00 0.00 0.00 3.50
24 25 1.574702 CGAGACGCTCCCCAAAAACC 61.575 60.000 2.00 0.00 0.00 3.27
25 26 1.574702 CCGAGACGCTCCCCAAAAAC 61.575 60.000 2.00 0.00 0.00 2.43
26 27 1.302192 CCGAGACGCTCCCCAAAAA 60.302 57.895 2.00 0.00 0.00 1.94
27 28 2.345991 CCGAGACGCTCCCCAAAA 59.654 61.111 2.00 0.00 0.00 2.44
28 29 4.388499 GCCGAGACGCTCCCCAAA 62.388 66.667 2.00 0.00 0.00 3.28
46 47 4.933064 CGGATCGGGAGCAGTCGC 62.933 72.222 0.00 0.00 38.99 5.19
47 48 3.471244 GACGGATCGGGAGCAGTCG 62.471 68.421 5.18 0.00 32.92 4.18
48 49 2.413765 GACGGATCGGGAGCAGTC 59.586 66.667 5.18 1.77 35.12 3.51
49 50 3.148279 GGACGGATCGGGAGCAGT 61.148 66.667 5.18 0.00 0.00 4.40
50 51 3.917760 GGGACGGATCGGGAGCAG 61.918 72.222 5.18 0.00 0.00 4.24
53 54 3.227276 CTGGGGACGGATCGGGAG 61.227 72.222 5.18 0.00 39.98 4.30
56 57 3.917760 GAGCTGGGGACGGATCGG 61.918 72.222 0.00 0.00 43.12 4.18
59 60 4.779733 ACGGAGCTGGGGACGGAT 62.780 66.667 0.00 0.00 39.98 4.18
62 63 4.135153 CTGACGGAGCTGGGGACG 62.135 72.222 0.00 0.00 0.00 4.79
63 64 4.459089 GCTGACGGAGCTGGGGAC 62.459 72.222 0.00 0.00 45.21 4.46
79 80 1.406205 GGAAGTAGTGGAAGCAGAGGC 60.406 57.143 0.00 0.00 41.61 4.70
80 81 1.208293 GGGAAGTAGTGGAAGCAGAGG 59.792 57.143 0.00 0.00 0.00 3.69
81 82 1.208293 GGGGAAGTAGTGGAAGCAGAG 59.792 57.143 0.00 0.00 0.00 3.35
82 83 1.203313 AGGGGAAGTAGTGGAAGCAGA 60.203 52.381 0.00 0.00 0.00 4.26
83 84 1.065854 CAGGGGAAGTAGTGGAAGCAG 60.066 57.143 0.00 0.00 0.00 4.24
84 85 0.984230 CAGGGGAAGTAGTGGAAGCA 59.016 55.000 0.00 0.00 0.00 3.91
85 86 0.393132 GCAGGGGAAGTAGTGGAAGC 60.393 60.000 0.00 0.00 0.00 3.86
86 87 0.984230 TGCAGGGGAAGTAGTGGAAG 59.016 55.000 0.00 0.00 0.00 3.46
87 88 1.559682 GATGCAGGGGAAGTAGTGGAA 59.440 52.381 0.00 0.00 0.00 3.53
88 89 1.204146 GATGCAGGGGAAGTAGTGGA 58.796 55.000 0.00 0.00 0.00 4.02
89 90 0.911769 TGATGCAGGGGAAGTAGTGG 59.088 55.000 0.00 0.00 0.00 4.00
90 91 2.290260 TGTTGATGCAGGGGAAGTAGTG 60.290 50.000 0.00 0.00 0.00 2.74
91 92 1.985159 TGTTGATGCAGGGGAAGTAGT 59.015 47.619 0.00 0.00 0.00 2.73
92 93 2.359900 GTGTTGATGCAGGGGAAGTAG 58.640 52.381 0.00 0.00 0.00 2.57
93 94 1.004277 GGTGTTGATGCAGGGGAAGTA 59.996 52.381 0.00 0.00 0.00 2.24
94 95 0.251341 GGTGTTGATGCAGGGGAAGT 60.251 55.000 0.00 0.00 0.00 3.01
95 96 0.251297 TGGTGTTGATGCAGGGGAAG 60.251 55.000 0.00 0.00 0.00 3.46
96 97 0.409092 ATGGTGTTGATGCAGGGGAA 59.591 50.000 0.00 0.00 0.00 3.97
97 98 0.323633 CATGGTGTTGATGCAGGGGA 60.324 55.000 0.00 0.00 0.00 4.81
98 99 1.324740 CCATGGTGTTGATGCAGGGG 61.325 60.000 2.57 0.00 0.00 4.79
99 100 1.952102 GCCATGGTGTTGATGCAGGG 61.952 60.000 14.67 0.00 0.00 4.45
100 101 1.514087 GCCATGGTGTTGATGCAGG 59.486 57.895 14.67 0.00 0.00 4.85
101 102 1.514087 GGCCATGGTGTTGATGCAG 59.486 57.895 14.67 0.00 0.00 4.41
102 103 2.341875 CGGCCATGGTGTTGATGCA 61.342 57.895 14.67 0.00 0.00 3.96
103 104 2.045708 TCGGCCATGGTGTTGATGC 61.046 57.895 14.67 0.00 0.00 3.91
104 105 1.802636 GTCGGCCATGGTGTTGATG 59.197 57.895 14.67 0.00 0.00 3.07
105 106 1.745115 CGTCGGCCATGGTGTTGAT 60.745 57.895 14.67 0.00 0.00 2.57
106 107 2.178876 ATCGTCGGCCATGGTGTTGA 62.179 55.000 14.67 5.97 0.00 3.18
107 108 1.745115 ATCGTCGGCCATGGTGTTG 60.745 57.895 14.67 0.83 0.00 3.33
108 109 1.745115 CATCGTCGGCCATGGTGTT 60.745 57.895 14.67 0.00 0.00 3.32
109 110 2.125147 CATCGTCGGCCATGGTGT 60.125 61.111 14.67 0.00 0.00 4.16
110 111 3.576356 GCATCGTCGGCCATGGTG 61.576 66.667 14.67 6.70 0.00 4.17
120 121 3.330853 CTTAGCGGCGGCATCGTC 61.331 66.667 19.21 0.00 43.41 4.20
121 122 3.365291 TTCTTAGCGGCGGCATCGT 62.365 57.895 19.21 0.00 43.41 3.73
122 123 2.584970 TTCTTAGCGGCGGCATCG 60.585 61.111 19.21 5.75 43.41 3.84
123 124 0.810031 TTCTTCTTAGCGGCGGCATC 60.810 55.000 19.21 0.00 43.41 3.91
124 125 0.811616 CTTCTTCTTAGCGGCGGCAT 60.812 55.000 19.21 6.26 43.41 4.40
125 126 1.447838 CTTCTTCTTAGCGGCGGCA 60.448 57.895 19.21 1.65 43.41 5.69
126 127 2.174319 CCTTCTTCTTAGCGGCGGC 61.174 63.158 9.78 8.43 40.37 6.53
127 128 2.174319 GCCTTCTTCTTAGCGGCGG 61.174 63.158 9.78 0.00 31.25 6.13
128 129 2.174319 GGCCTTCTTCTTAGCGGCG 61.174 63.158 0.51 0.51 38.08 6.46
129 130 1.078426 TGGCCTTCTTCTTAGCGGC 60.078 57.895 3.32 0.00 37.12 6.53
130 131 1.084370 CGTGGCCTTCTTCTTAGCGG 61.084 60.000 3.32 0.00 0.00 5.52
131 132 1.084370 CCGTGGCCTTCTTCTTAGCG 61.084 60.000 3.32 0.00 0.00 4.26
132 133 0.249398 TCCGTGGCCTTCTTCTTAGC 59.751 55.000 3.32 0.00 0.00 3.09
133 134 1.736032 CGTCCGTGGCCTTCTTCTTAG 60.736 57.143 3.32 0.00 0.00 2.18
134 135 0.245539 CGTCCGTGGCCTTCTTCTTA 59.754 55.000 3.32 0.00 0.00 2.10
135 136 1.004918 CGTCCGTGGCCTTCTTCTT 60.005 57.895 3.32 0.00 0.00 2.52
136 137 1.469335 TTCGTCCGTGGCCTTCTTCT 61.469 55.000 3.32 0.00 0.00 2.85
137 138 1.005394 TTCGTCCGTGGCCTTCTTC 60.005 57.895 3.32 0.00 0.00 2.87
138 139 1.004918 CTTCGTCCGTGGCCTTCTT 60.005 57.895 3.32 0.00 0.00 2.52
139 140 2.657237 CTTCGTCCGTGGCCTTCT 59.343 61.111 3.32 0.00 0.00 2.85
140 141 3.119096 GCTTCGTCCGTGGCCTTC 61.119 66.667 3.32 0.00 0.00 3.46
141 142 4.699522 GGCTTCGTCCGTGGCCTT 62.700 66.667 3.32 0.00 41.20 4.35
188 189 2.375345 ATACCCTCCGGTTGGCCAG 61.375 63.158 5.11 0.00 40.58 4.85
189 190 2.285818 ATACCCTCCGGTTGGCCA 60.286 61.111 0.00 0.00 40.58 5.36
190 191 1.705997 ATCATACCCTCCGGTTGGCC 61.706 60.000 0.00 0.00 40.58 5.36
191 192 0.250338 GATCATACCCTCCGGTTGGC 60.250 60.000 0.00 0.00 40.58 4.52
192 193 1.070758 CAGATCATACCCTCCGGTTGG 59.929 57.143 0.00 5.83 40.58 3.77
193 194 1.762957 ACAGATCATACCCTCCGGTTG 59.237 52.381 0.00 0.00 40.58 3.77
194 195 2.176247 ACAGATCATACCCTCCGGTT 57.824 50.000 0.00 0.00 40.58 4.44
195 196 2.625883 TGAACAGATCATACCCTCCGGT 60.626 50.000 0.00 0.00 38.58 5.28
196 197 2.039418 TGAACAGATCATACCCTCCGG 58.961 52.381 0.00 0.00 31.50 5.14
206 207 5.026121 AGTAAGTGAGGGATGAACAGATCA 58.974 41.667 0.00 0.00 43.67 2.92
207 208 5.596845 GAGTAAGTGAGGGATGAACAGATC 58.403 45.833 0.00 0.00 0.00 2.75
208 209 4.098654 CGAGTAAGTGAGGGATGAACAGAT 59.901 45.833 0.00 0.00 0.00 2.90
209 210 3.444034 CGAGTAAGTGAGGGATGAACAGA 59.556 47.826 0.00 0.00 0.00 3.41
210 211 3.193691 ACGAGTAAGTGAGGGATGAACAG 59.806 47.826 0.00 0.00 0.00 3.16
211 212 3.056821 CACGAGTAAGTGAGGGATGAACA 60.057 47.826 0.00 0.00 44.43 3.18
212 213 3.512680 CACGAGTAAGTGAGGGATGAAC 58.487 50.000 0.00 0.00 44.43 3.18
213 214 2.094182 GCACGAGTAAGTGAGGGATGAA 60.094 50.000 0.88 0.00 44.43 2.57
214 215 1.476891 GCACGAGTAAGTGAGGGATGA 59.523 52.381 0.88 0.00 44.43 2.92
215 216 1.478510 AGCACGAGTAAGTGAGGGATG 59.521 52.381 0.88 0.00 44.43 3.51
216 217 1.853963 AGCACGAGTAAGTGAGGGAT 58.146 50.000 0.88 0.00 44.43 3.85
217 218 1.629043 AAGCACGAGTAAGTGAGGGA 58.371 50.000 0.88 0.00 44.43 4.20
218 219 3.448686 CATAAGCACGAGTAAGTGAGGG 58.551 50.000 0.88 0.00 44.43 4.30
219 220 2.860735 GCATAAGCACGAGTAAGTGAGG 59.139 50.000 0.88 0.00 44.43 3.86
220 221 3.775202 AGCATAAGCACGAGTAAGTGAG 58.225 45.455 0.88 0.00 44.43 3.51
221 222 3.868757 AGCATAAGCACGAGTAAGTGA 57.131 42.857 0.88 0.00 44.43 3.41
222 223 3.487574 GCTAGCATAAGCACGAGTAAGTG 59.512 47.826 10.63 0.00 45.49 3.16
223 224 3.491104 GGCTAGCATAAGCACGAGTAAGT 60.491 47.826 18.24 0.00 44.64 2.24
224 225 3.053455 GGCTAGCATAAGCACGAGTAAG 58.947 50.000 18.24 0.00 44.64 2.34
225 226 2.543031 CGGCTAGCATAAGCACGAGTAA 60.543 50.000 18.24 0.00 44.64 2.24
226 227 1.001706 CGGCTAGCATAAGCACGAGTA 60.002 52.381 18.24 0.00 44.64 2.59
227 228 0.249073 CGGCTAGCATAAGCACGAGT 60.249 55.000 18.24 0.00 44.64 4.18
228 229 0.249073 ACGGCTAGCATAAGCACGAG 60.249 55.000 18.24 0.00 44.64 4.18
229 230 1.026584 TACGGCTAGCATAAGCACGA 58.973 50.000 18.24 0.00 44.64 4.35
230 231 2.065993 ATACGGCTAGCATAAGCACG 57.934 50.000 18.24 11.28 44.64 5.34
231 232 4.327357 CACATATACGGCTAGCATAAGCAC 59.673 45.833 18.24 0.00 44.64 4.40
232 233 4.494484 CACATATACGGCTAGCATAAGCA 58.506 43.478 18.24 0.00 44.64 3.91
233 234 3.307242 GCACATATACGGCTAGCATAAGC 59.693 47.826 18.24 8.27 41.99 3.09
234 235 4.564372 CAGCACATATACGGCTAGCATAAG 59.436 45.833 18.24 5.71 35.82 1.73
235 236 4.494484 CAGCACATATACGGCTAGCATAA 58.506 43.478 18.24 0.29 35.82 1.90
236 237 3.676049 GCAGCACATATACGGCTAGCATA 60.676 47.826 18.24 8.76 35.82 3.14
237 238 2.932622 GCAGCACATATACGGCTAGCAT 60.933 50.000 18.24 6.50 35.82 3.79
238 239 1.605457 GCAGCACATATACGGCTAGCA 60.605 52.381 18.24 0.00 35.82 3.49
239 240 1.071605 GCAGCACATATACGGCTAGC 58.928 55.000 6.04 6.04 35.82 3.42
240 241 2.061773 GTGCAGCACATATACGGCTAG 58.938 52.381 21.22 0.00 35.82 3.42
241 242 1.410882 TGTGCAGCACATATACGGCTA 59.589 47.619 24.84 0.00 39.62 3.93
242 243 0.177836 TGTGCAGCACATATACGGCT 59.822 50.000 24.84 0.00 39.62 5.52
243 244 2.689083 TGTGCAGCACATATACGGC 58.311 52.632 24.84 0.00 39.62 5.68
252 253 2.733227 GCAAACCATCTATGTGCAGCAC 60.733 50.000 19.37 19.37 35.28 4.40
253 254 1.473677 GCAAACCATCTATGTGCAGCA 59.526 47.619 0.00 0.00 35.28 4.41
254 255 1.747355 AGCAAACCATCTATGTGCAGC 59.253 47.619 6.75 0.00 37.68 5.25
255 256 3.693085 AGAAGCAAACCATCTATGTGCAG 59.307 43.478 6.75 0.00 37.68 4.41
256 257 3.689347 AGAAGCAAACCATCTATGTGCA 58.311 40.909 6.75 0.00 37.68 4.57
257 258 5.755813 CATAGAAGCAAACCATCTATGTGC 58.244 41.667 11.87 0.00 43.95 4.57
261 262 7.341805 ACAGAACATAGAAGCAAACCATCTAT 58.658 34.615 0.00 0.00 36.96 1.98
262 263 6.711277 ACAGAACATAGAAGCAAACCATCTA 58.289 36.000 0.00 0.00 0.00 1.98
263 264 5.564550 ACAGAACATAGAAGCAAACCATCT 58.435 37.500 0.00 0.00 0.00 2.90
264 265 5.886960 ACAGAACATAGAAGCAAACCATC 57.113 39.130 0.00 0.00 0.00 3.51
265 266 5.351465 CGTACAGAACATAGAAGCAAACCAT 59.649 40.000 0.00 0.00 0.00 3.55
266 267 4.688879 CGTACAGAACATAGAAGCAAACCA 59.311 41.667 0.00 0.00 0.00 3.67
267 268 4.689345 ACGTACAGAACATAGAAGCAAACC 59.311 41.667 0.00 0.00 0.00 3.27
268 269 5.609088 CACGTACAGAACATAGAAGCAAAC 58.391 41.667 0.00 0.00 0.00 2.93
269 270 4.151689 GCACGTACAGAACATAGAAGCAAA 59.848 41.667 0.00 0.00 0.00 3.68
270 271 3.678072 GCACGTACAGAACATAGAAGCAA 59.322 43.478 0.00 0.00 0.00 3.91
271 272 3.056821 AGCACGTACAGAACATAGAAGCA 60.057 43.478 0.00 0.00 0.00 3.91
272 273 3.512680 AGCACGTACAGAACATAGAAGC 58.487 45.455 0.00 0.00 0.00 3.86
273 274 5.881447 ACTAGCACGTACAGAACATAGAAG 58.119 41.667 0.00 0.00 0.00 2.85
274 275 5.892160 ACTAGCACGTACAGAACATAGAA 57.108 39.130 0.00 0.00 0.00 2.10
275 276 6.541278 ACATACTAGCACGTACAGAACATAGA 59.459 38.462 0.00 0.00 0.00 1.98
276 277 6.726230 ACATACTAGCACGTACAGAACATAG 58.274 40.000 0.00 0.00 0.00 2.23
277 278 6.688637 ACATACTAGCACGTACAGAACATA 57.311 37.500 0.00 0.00 0.00 2.29
278 279 5.578005 ACATACTAGCACGTACAGAACAT 57.422 39.130 0.00 0.00 0.00 2.71
279 280 5.381174 AACATACTAGCACGTACAGAACA 57.619 39.130 0.00 0.00 0.00 3.18
280 281 6.471519 CCTAAACATACTAGCACGTACAGAAC 59.528 42.308 0.00 0.00 0.00 3.01
281 282 6.375174 TCCTAAACATACTAGCACGTACAGAA 59.625 38.462 0.00 0.00 0.00 3.02
282 283 5.882000 TCCTAAACATACTAGCACGTACAGA 59.118 40.000 0.00 0.00 0.00 3.41
283 284 6.127810 TCCTAAACATACTAGCACGTACAG 57.872 41.667 0.00 0.00 0.00 2.74
284 285 6.513806 TTCCTAAACATACTAGCACGTACA 57.486 37.500 0.00 0.00 0.00 2.90
285 286 6.359087 CGATTCCTAAACATACTAGCACGTAC 59.641 42.308 0.00 0.00 0.00 3.67
286 287 6.432936 CGATTCCTAAACATACTAGCACGTA 58.567 40.000 0.00 0.00 0.00 3.57
287 288 5.279384 CGATTCCTAAACATACTAGCACGT 58.721 41.667 0.00 0.00 0.00 4.49
288 289 4.680110 CCGATTCCTAAACATACTAGCACG 59.320 45.833 0.00 0.00 0.00 5.34
289 290 5.598769 ACCGATTCCTAAACATACTAGCAC 58.401 41.667 0.00 0.00 0.00 4.40
290 291 5.864418 ACCGATTCCTAAACATACTAGCA 57.136 39.130 0.00 0.00 0.00 3.49
291 292 7.600065 TCATACCGATTCCTAAACATACTAGC 58.400 38.462 0.00 0.00 0.00 3.42
292 293 9.011095 TCTCATACCGATTCCTAAACATACTAG 57.989 37.037 0.00 0.00 0.00 2.57
293 294 8.929260 TCTCATACCGATTCCTAAACATACTA 57.071 34.615 0.00 0.00 0.00 1.82
294 295 7.834881 TCTCATACCGATTCCTAAACATACT 57.165 36.000 0.00 0.00 0.00 2.12
295 296 7.063544 GCATCTCATACCGATTCCTAAACATAC 59.936 40.741 0.00 0.00 0.00 2.39
296 297 7.097192 GCATCTCATACCGATTCCTAAACATA 58.903 38.462 0.00 0.00 0.00 2.29
297 298 5.934625 GCATCTCATACCGATTCCTAAACAT 59.065 40.000 0.00 0.00 0.00 2.71
298 299 5.163353 TGCATCTCATACCGATTCCTAAACA 60.163 40.000 0.00 0.00 0.00 2.83
299 300 5.297547 TGCATCTCATACCGATTCCTAAAC 58.702 41.667 0.00 0.00 0.00 2.01
300 301 5.545063 TGCATCTCATACCGATTCCTAAA 57.455 39.130 0.00 0.00 0.00 1.85
301 302 5.745312 ATGCATCTCATACCGATTCCTAA 57.255 39.130 0.00 0.00 32.59 2.69
312 313 4.935205 GGCAAATACGGTATGCATCTCATA 59.065 41.667 0.19 0.00 41.80 2.15
313 314 3.753272 GGCAAATACGGTATGCATCTCAT 59.247 43.478 0.19 0.00 41.80 2.90
314 315 3.138304 GGCAAATACGGTATGCATCTCA 58.862 45.455 0.19 0.00 41.80 3.27
315 316 3.138304 TGGCAAATACGGTATGCATCTC 58.862 45.455 0.19 0.00 41.80 2.75
316 317 3.207265 TGGCAAATACGGTATGCATCT 57.793 42.857 0.19 0.00 41.80 2.90
317 318 3.825308 CATGGCAAATACGGTATGCATC 58.175 45.455 0.19 0.00 41.80 3.91
318 319 2.030007 GCATGGCAAATACGGTATGCAT 60.030 45.455 13.88 3.79 41.80 3.96
319 320 1.336440 GCATGGCAAATACGGTATGCA 59.664 47.619 13.88 0.00 41.80 3.96
320 321 1.608590 AGCATGGCAAATACGGTATGC 59.391 47.619 0.58 3.34 40.74 3.14
321 322 3.988379 AAGCATGGCAAATACGGTATG 57.012 42.857 0.58 0.00 0.00 2.39
322 323 4.515191 CAGTAAGCATGGCAAATACGGTAT 59.485 41.667 0.00 0.00 0.00 2.73
323 324 3.874543 CAGTAAGCATGGCAAATACGGTA 59.125 43.478 0.00 0.00 0.00 4.02
324 325 2.682856 CAGTAAGCATGGCAAATACGGT 59.317 45.455 0.00 0.00 0.00 4.83
325 326 2.682856 ACAGTAAGCATGGCAAATACGG 59.317 45.455 0.00 0.00 0.00 4.02
326 327 4.355543 AACAGTAAGCATGGCAAATACG 57.644 40.909 0.00 0.00 0.00 3.06
327 328 6.852664 AGTAAACAGTAAGCATGGCAAATAC 58.147 36.000 0.00 0.00 0.00 1.89
328 329 6.183360 CGAGTAAACAGTAAGCATGGCAAATA 60.183 38.462 0.00 0.00 0.00 1.40
329 330 5.391950 CGAGTAAACAGTAAGCATGGCAAAT 60.392 40.000 0.00 0.00 0.00 2.32
330 331 4.083537 CGAGTAAACAGTAAGCATGGCAAA 60.084 41.667 0.00 0.00 0.00 3.68
331 332 3.435327 CGAGTAAACAGTAAGCATGGCAA 59.565 43.478 0.00 0.00 0.00 4.52
332 333 3.000041 CGAGTAAACAGTAAGCATGGCA 59.000 45.455 0.00 0.00 0.00 4.92
333 334 3.000727 ACGAGTAAACAGTAAGCATGGC 58.999 45.455 0.00 0.00 0.00 4.40
334 335 3.370978 CCACGAGTAAACAGTAAGCATGG 59.629 47.826 0.00 0.00 0.00 3.66
335 336 4.242475 TCCACGAGTAAACAGTAAGCATG 58.758 43.478 0.00 0.00 0.00 4.06
336 337 4.530710 TCCACGAGTAAACAGTAAGCAT 57.469 40.909 0.00 0.00 0.00 3.79
337 338 4.530710 ATCCACGAGTAAACAGTAAGCA 57.469 40.909 0.00 0.00 0.00 3.91
338 339 6.098017 ACTAATCCACGAGTAAACAGTAAGC 58.902 40.000 0.00 0.00 0.00 3.09
339 340 7.536855 AGACTAATCCACGAGTAAACAGTAAG 58.463 38.462 0.00 0.00 0.00 2.34
340 341 7.458409 AGACTAATCCACGAGTAAACAGTAA 57.542 36.000 0.00 0.00 0.00 2.24
341 342 8.565896 TTAGACTAATCCACGAGTAAACAGTA 57.434 34.615 0.00 0.00 0.00 2.74
342 343 5.979288 AGACTAATCCACGAGTAAACAGT 57.021 39.130 0.00 0.00 0.00 3.55
343 344 7.435488 CCATTAGACTAATCCACGAGTAAACAG 59.565 40.741 4.66 0.00 0.00 3.16
344 345 7.262772 CCATTAGACTAATCCACGAGTAAACA 58.737 38.462 4.66 0.00 0.00 2.83
345 346 6.700520 CCCATTAGACTAATCCACGAGTAAAC 59.299 42.308 4.66 0.00 0.00 2.01
346 347 6.608405 TCCCATTAGACTAATCCACGAGTAAA 59.392 38.462 4.66 0.00 0.00 2.01
347 348 6.131264 TCCCATTAGACTAATCCACGAGTAA 58.869 40.000 4.66 0.00 0.00 2.24
348 349 5.698104 TCCCATTAGACTAATCCACGAGTA 58.302 41.667 4.66 0.00 0.00 2.59
349 350 4.543689 TCCCATTAGACTAATCCACGAGT 58.456 43.478 4.66 0.00 0.00 4.18
350 351 5.531122 TTCCCATTAGACTAATCCACGAG 57.469 43.478 4.66 0.00 0.00 4.18
351 352 5.943349 TTTCCCATTAGACTAATCCACGA 57.057 39.130 4.66 0.00 0.00 4.35
352 353 6.037172 CACTTTTCCCATTAGACTAATCCACG 59.963 42.308 4.66 0.00 0.00 4.94
353 354 6.183360 GCACTTTTCCCATTAGACTAATCCAC 60.183 42.308 4.66 0.00 0.00 4.02
354 355 5.885912 GCACTTTTCCCATTAGACTAATCCA 59.114 40.000 4.66 0.00 0.00 3.41
355 356 6.122964 AGCACTTTTCCCATTAGACTAATCC 58.877 40.000 4.66 0.00 0.00 3.01
356 357 8.732746 TTAGCACTTTTCCCATTAGACTAATC 57.267 34.615 4.66 0.00 0.00 1.75
360 361 9.700831 AAATATTAGCACTTTTCCCATTAGACT 57.299 29.630 0.00 0.00 0.00 3.24
361 362 9.952188 GAAATATTAGCACTTTTCCCATTAGAC 57.048 33.333 0.00 0.00 0.00 2.59
362 363 9.131791 GGAAATATTAGCACTTTTCCCATTAGA 57.868 33.333 2.56 0.00 40.69 2.10
363 364 8.912988 TGGAAATATTAGCACTTTTCCCATTAG 58.087 33.333 9.98 0.00 44.17 1.73
364 365 8.830915 TGGAAATATTAGCACTTTTCCCATTA 57.169 30.769 9.98 0.00 44.17 1.90
365 366 7.732222 TGGAAATATTAGCACTTTTCCCATT 57.268 32.000 9.98 0.00 44.17 3.16
366 367 7.180051 TGTTGGAAATATTAGCACTTTTCCCAT 59.820 33.333 9.98 0.00 44.17 4.00
367 368 6.495181 TGTTGGAAATATTAGCACTTTTCCCA 59.505 34.615 9.98 0.00 44.17 4.37
368 369 6.811665 GTGTTGGAAATATTAGCACTTTTCCC 59.188 38.462 9.98 0.00 44.17 3.97
369 370 7.375053 TGTGTTGGAAATATTAGCACTTTTCC 58.625 34.615 6.38 6.38 44.74 3.13
370 371 8.986477 ATGTGTTGGAAATATTAGCACTTTTC 57.014 30.769 5.60 0.00 0.00 2.29
371 372 9.423061 GAATGTGTTGGAAATATTAGCACTTTT 57.577 29.630 5.60 1.19 0.00 2.27
372 373 8.034804 GGAATGTGTTGGAAATATTAGCACTTT 58.965 33.333 5.60 5.40 0.00 2.66
373 374 7.178274 TGGAATGTGTTGGAAATATTAGCACTT 59.822 33.333 5.60 0.00 0.00 3.16
374 375 6.663093 TGGAATGTGTTGGAAATATTAGCACT 59.337 34.615 5.60 0.00 0.00 4.40
375 376 6.862209 TGGAATGTGTTGGAAATATTAGCAC 58.138 36.000 0.00 0.00 0.00 4.40
376 377 7.341512 TCATGGAATGTGTTGGAAATATTAGCA 59.658 33.333 0.00 0.00 46.80 3.49
377 378 7.715657 TCATGGAATGTGTTGGAAATATTAGC 58.284 34.615 0.00 0.00 46.80 3.09
380 381 9.425248 AGTATCATGGAATGTGTTGGAAATATT 57.575 29.630 0.00 0.00 46.80 1.28
382 383 9.913310 TTAGTATCATGGAATGTGTTGGAAATA 57.087 29.630 0.00 0.00 46.80 1.40
383 384 8.686334 GTTAGTATCATGGAATGTGTTGGAAAT 58.314 33.333 0.00 0.00 46.80 2.17
384 385 7.888021 AGTTAGTATCATGGAATGTGTTGGAAA 59.112 33.333 0.00 0.00 46.80 3.13
385 386 7.402054 AGTTAGTATCATGGAATGTGTTGGAA 58.598 34.615 0.00 0.00 46.80 3.53
386 387 6.957631 AGTTAGTATCATGGAATGTGTTGGA 58.042 36.000 0.00 0.00 46.80 3.53
387 388 7.630242 AAGTTAGTATCATGGAATGTGTTGG 57.370 36.000 0.00 0.00 46.80 3.77
388 389 9.383519 ACTAAGTTAGTATCATGGAATGTGTTG 57.616 33.333 14.00 0.00 40.68 3.33
389 390 9.959721 AACTAAGTTAGTATCATGGAATGTGTT 57.040 29.630 15.84 0.00 41.24 3.32
404 405 9.933240 AGTGGGTAGTATGATAACTAAGTTAGT 57.067 33.333 9.85 9.85 41.73 2.24
407 408 9.140874 GGTAGTGGGTAGTATGATAACTAAGTT 57.859 37.037 0.00 0.00 33.85 2.66
408 409 8.509441 AGGTAGTGGGTAGTATGATAACTAAGT 58.491 37.037 0.00 0.00 33.85 2.24
409 410 8.937207 AGGTAGTGGGTAGTATGATAACTAAG 57.063 38.462 0.00 0.00 33.85 2.18
410 411 7.946776 GGAGGTAGTGGGTAGTATGATAACTAA 59.053 40.741 0.00 0.00 33.85 2.24
411 412 7.465116 GGAGGTAGTGGGTAGTATGATAACTA 58.535 42.308 0.00 0.00 0.00 2.24
412 413 6.313324 GGAGGTAGTGGGTAGTATGATAACT 58.687 44.000 0.00 0.00 0.00 2.24
413 414 5.182760 CGGAGGTAGTGGGTAGTATGATAAC 59.817 48.000 0.00 0.00 0.00 1.89
414 415 5.163055 ACGGAGGTAGTGGGTAGTATGATAA 60.163 44.000 0.00 0.00 0.00 1.75
415 416 4.352001 ACGGAGGTAGTGGGTAGTATGATA 59.648 45.833 0.00 0.00 0.00 2.15
416 417 3.139770 ACGGAGGTAGTGGGTAGTATGAT 59.860 47.826 0.00 0.00 0.00 2.45
417 418 2.511218 ACGGAGGTAGTGGGTAGTATGA 59.489 50.000 0.00 0.00 0.00 2.15
418 419 2.941480 ACGGAGGTAGTGGGTAGTATG 58.059 52.381 0.00 0.00 0.00 2.39
419 420 4.796110 TTACGGAGGTAGTGGGTAGTAT 57.204 45.455 0.00 0.00 0.00 2.12
420 421 4.796110 ATTACGGAGGTAGTGGGTAGTA 57.204 45.455 0.00 0.00 0.00 1.82
421 422 3.677156 ATTACGGAGGTAGTGGGTAGT 57.323 47.619 0.00 0.00 0.00 2.73
422 423 4.403432 TCAAATTACGGAGGTAGTGGGTAG 59.597 45.833 0.00 0.00 0.00 3.18
423 424 4.352009 TCAAATTACGGAGGTAGTGGGTA 58.648 43.478 0.00 0.00 0.00 3.69
424 425 3.175594 TCAAATTACGGAGGTAGTGGGT 58.824 45.455 0.00 0.00 0.00 4.51
425 426 3.899052 TCAAATTACGGAGGTAGTGGG 57.101 47.619 0.00 0.00 0.00 4.61
426 427 5.391629 GCTTTTCAAATTACGGAGGTAGTGG 60.392 44.000 0.00 0.00 0.00 4.00
427 428 5.180492 TGCTTTTCAAATTACGGAGGTAGTG 59.820 40.000 0.00 0.00 0.00 2.74
428 429 5.310451 TGCTTTTCAAATTACGGAGGTAGT 58.690 37.500 0.00 0.00 0.00 2.73
429 430 5.873179 TGCTTTTCAAATTACGGAGGTAG 57.127 39.130 0.00 0.00 0.00 3.18
430 431 6.440436 GTTTGCTTTTCAAATTACGGAGGTA 58.560 36.000 0.00 0.00 45.43 3.08
431 432 5.286438 GTTTGCTTTTCAAATTACGGAGGT 58.714 37.500 0.00 0.00 45.43 3.85
432 433 4.381566 CGTTTGCTTTTCAAATTACGGAGG 59.618 41.667 0.00 0.00 45.43 4.30
433 434 4.973663 ACGTTTGCTTTTCAAATTACGGAG 59.026 37.500 0.00 0.00 45.43 4.63
434 435 4.922719 ACGTTTGCTTTTCAAATTACGGA 58.077 34.783 0.00 0.00 45.43 4.69
435 436 5.629348 AACGTTTGCTTTTCAAATTACGG 57.371 34.783 0.00 0.00 45.43 4.02
436 437 7.924768 AAAAACGTTTGCTTTTCAAATTACG 57.075 28.000 15.46 0.00 45.43 3.18
511 512 7.719483 AGTGTTGAGAACAATGTTGATTCATT 58.281 30.769 2.20 0.00 44.16 2.57
512 513 7.281040 AGTGTTGAGAACAATGTTGATTCAT 57.719 32.000 2.20 0.00 44.16 2.57
513 514 6.698008 AGTGTTGAGAACAATGTTGATTCA 57.302 33.333 2.20 2.01 44.16 2.57
514 515 7.865707 ACTAGTGTTGAGAACAATGTTGATTC 58.134 34.615 2.20 0.00 44.16 2.52
515 516 7.807977 ACTAGTGTTGAGAACAATGTTGATT 57.192 32.000 2.20 0.00 44.16 2.57
516 517 8.150945 ACTACTAGTGTTGAGAACAATGTTGAT 58.849 33.333 2.20 0.00 44.16 2.57
517 518 7.497595 ACTACTAGTGTTGAGAACAATGTTGA 58.502 34.615 2.20 0.00 44.16 3.18
518 519 7.715265 ACTACTAGTGTTGAGAACAATGTTG 57.285 36.000 2.20 0.00 44.16 3.33
519 520 9.998106 AATACTACTAGTGTTGAGAACAATGTT 57.002 29.630 5.39 0.00 44.16 2.71
520 521 9.998106 AAATACTACTAGTGTTGAGAACAATGT 57.002 29.630 5.39 0.19 44.16 2.71
523 524 9.692749 CAGAAATACTACTAGTGTTGAGAACAA 57.307 33.333 5.39 0.00 44.16 2.83
524 525 9.074576 TCAGAAATACTACTAGTGTTGAGAACA 57.925 33.333 5.39 0.00 39.52 3.18
635 639 9.394477 GTTATTGCAAACGATTAAGAAGTTTCT 57.606 29.630 1.71 0.00 39.74 2.52
785 789 5.360999 ACTTTGAGAGTTTGAGAAAAAGGGG 59.639 40.000 0.00 0.00 33.92 4.79
862 868 5.817296 TGTAGATTAGCTGGCTAATGTTGTG 59.183 40.000 26.16 0.00 45.88 3.33
876 893 6.261158 GGGATGAAGAAAGGTTGTAGATTAGC 59.739 42.308 0.00 0.00 0.00 3.09
994 1017 5.649557 TGGTTGTGAAGAGTTTGTGATTTG 58.350 37.500 0.00 0.00 0.00 2.32
1050 1079 2.160205 GGCAAGGACTAAAGGGACAAC 58.840 52.381 0.00 0.00 0.00 3.32
1052 1081 1.440618 TGGCAAGGACTAAAGGGACA 58.559 50.000 0.00 0.00 0.00 4.02
1073 1102 1.406065 CCGTGAGAGGCTGGATGGAT 61.406 60.000 0.00 0.00 0.00 3.41
1140 1169 2.871427 CGTGCTCGGCGATAAAGGC 61.871 63.158 11.27 10.91 0.00 4.35
1184 1213 3.849708 TGACGACGAACTTCATAACATCG 59.150 43.478 0.00 0.00 39.30 3.84
1295 1451 1.726265 GGGTAGTGAGTAGCGACCG 59.274 63.158 0.00 0.00 33.30 4.79
1310 1466 0.321671 CCTTGCGGATGATATCGGGT 59.678 55.000 0.00 0.00 0.00 5.28
1311 1467 0.321671 ACCTTGCGGATGATATCGGG 59.678 55.000 0.00 0.00 0.00 5.14
1389 1545 0.885879 AGTGCCATGCATGTGAACAG 59.114 50.000 24.58 9.73 41.91 3.16
1390 1546 1.270274 GAAGTGCCATGCATGTGAACA 59.730 47.619 24.58 14.12 41.91 3.18
1554 1710 7.400599 ACTTGATGTTGCTATGATCACAATT 57.599 32.000 0.00 0.00 0.00 2.32
1556 1712 7.012610 CCATACTTGATGTTGCTATGATCACAA 59.987 37.037 0.00 0.00 33.19 3.33
1690 1846 1.133025 CTTCCCAATTGTCATCGTGGC 59.867 52.381 4.43 0.00 0.00 5.01
1773 1933 9.841295 TCTTAAGTGGTACTGAAGTTGTATTTT 57.159 29.630 1.63 0.00 37.81 1.82
1774 1934 9.490379 CTCTTAAGTGGTACTGAAGTTGTATTT 57.510 33.333 1.63 0.00 37.81 1.40
1775 1935 7.603024 GCTCTTAAGTGGTACTGAAGTTGTATT 59.397 37.037 1.63 0.00 37.81 1.89
1776 1936 7.097834 GCTCTTAAGTGGTACTGAAGTTGTAT 58.902 38.462 1.63 0.00 37.81 2.29
1777 1937 6.041182 TGCTCTTAAGTGGTACTGAAGTTGTA 59.959 38.462 1.63 0.00 37.81 2.41
1778 1938 5.163343 TGCTCTTAAGTGGTACTGAAGTTGT 60.163 40.000 1.63 0.00 37.81 3.32
1779 1939 5.297547 TGCTCTTAAGTGGTACTGAAGTTG 58.702 41.667 1.63 3.10 37.81 3.16
1780 1940 5.546621 TGCTCTTAAGTGGTACTGAAGTT 57.453 39.130 1.63 0.00 37.81 2.66
1781 1941 5.482175 AGATGCTCTTAAGTGGTACTGAAGT 59.518 40.000 1.63 0.00 37.81 3.01
1782 1942 5.971763 AGATGCTCTTAAGTGGTACTGAAG 58.028 41.667 1.63 0.44 37.92 3.02
1783 1943 5.717178 AGAGATGCTCTTAAGTGGTACTGAA 59.283 40.000 1.63 0.00 37.60 3.02
1784 1944 5.265191 AGAGATGCTCTTAAGTGGTACTGA 58.735 41.667 1.63 0.00 37.60 3.41
1785 1945 5.590530 AGAGATGCTCTTAAGTGGTACTG 57.409 43.478 1.63 0.00 37.60 2.74
1786 1946 6.663953 TGTTAGAGATGCTCTTAAGTGGTACT 59.336 38.462 1.63 0.00 41.50 2.73
1787 1947 6.864342 TGTTAGAGATGCTCTTAAGTGGTAC 58.136 40.000 1.63 0.00 41.50 3.34
1788 1948 6.890268 TCTGTTAGAGATGCTCTTAAGTGGTA 59.110 38.462 1.63 0.00 41.50 3.25
1789 1949 5.717178 TCTGTTAGAGATGCTCTTAAGTGGT 59.283 40.000 1.63 0.00 41.50 4.16
1790 1950 6.214191 TCTGTTAGAGATGCTCTTAAGTGG 57.786 41.667 1.63 0.00 41.50 4.00
1817 1977 8.982723 AGTCTGTTTGCTCCTCTAAATTATAGA 58.017 33.333 0.00 0.00 0.00 1.98
1818 1978 9.606631 AAGTCTGTTTGCTCCTCTAAATTATAG 57.393 33.333 0.00 0.00 0.00 1.31
1914 2078 2.031769 CGGTTCCGGTTTGGTTAGAAAC 60.032 50.000 0.00 0.00 39.52 2.78
1915 2079 2.220313 CGGTTCCGGTTTGGTTAGAAA 58.780 47.619 0.00 0.00 39.52 2.52
1916 2080 1.881591 CGGTTCCGGTTTGGTTAGAA 58.118 50.000 0.00 0.00 39.52 2.10
1917 2081 0.603439 GCGGTTCCGGTTTGGTTAGA 60.603 55.000 13.16 0.00 39.52 2.10
1918 2082 0.604511 AGCGGTTCCGGTTTGGTTAG 60.605 55.000 10.19 0.00 36.78 2.34
1919 2083 0.683973 TAGCGGTTCCGGTTTGGTTA 59.316 50.000 20.40 0.00 40.66 2.85
1920 2084 0.179023 TTAGCGGTTCCGGTTTGGTT 60.179 50.000 20.40 0.00 40.66 3.67
1951 2115 7.713734 ATGCATGAGCCAAATATAAGCTATT 57.286 32.000 0.00 0.00 41.13 1.73
2010 2179 5.871396 TCAAGAGTCACCTTCTAGTTTGT 57.129 39.130 0.00 0.00 0.00 2.83
2014 2183 5.719085 ACATGATCAAGAGTCACCTTCTAGT 59.281 40.000 4.68 0.00 0.00 2.57
2065 4341 4.457496 CATCGCGGTCACCCTGCT 62.457 66.667 6.13 0.00 0.00 4.24
2100 4378 2.290641 TGATGTAAACGGGAGCATTGGT 60.291 45.455 0.00 0.00 0.00 3.67
2101 4379 2.364632 TGATGTAAACGGGAGCATTGG 58.635 47.619 0.00 0.00 0.00 3.16
2138 4416 5.529333 TACTATCCAGTCGCCAACGTTGG 62.529 52.174 37.53 37.53 42.59 3.77
2144 4422 1.479323 GTGGTACTATCCAGTCGCCAA 59.521 52.381 0.00 0.00 39.88 4.52
2175 4453 3.196685 GCTACCAGAGATCTGTTCTTGGT 59.803 47.826 0.00 18.13 42.92 3.67
2191 4469 0.830444 AGAGGACAACACGGCTACCA 60.830 55.000 0.00 0.00 0.00 3.25
2195 4473 2.031163 GCAGAGGACAACACGGCT 59.969 61.111 0.00 0.00 0.00 5.52
2216 4494 0.662619 TGTTCCACTTTCAGCTTGCG 59.337 50.000 0.00 0.00 0.00 4.85
2250 4528 4.379143 TGTCCAGACGACGTCGCG 62.379 66.667 35.92 23.95 45.23 5.87
2252 4530 2.499098 CGTGTCCAGACGACGTCG 60.499 66.667 34.58 34.58 45.23 5.12
2288 4566 5.983720 CCGGAAAGTGATTGAACGTAGATAT 59.016 40.000 0.00 0.00 0.00 1.63
2294 4572 2.413837 CTCCGGAAAGTGATTGAACGT 58.586 47.619 5.23 0.00 0.00 3.99
2300 4578 0.326264 AGCAGCTCCGGAAAGTGATT 59.674 50.000 5.23 0.00 0.00 2.57
2308 4586 2.759973 CCTGGTAGCAGCTCCGGA 60.760 66.667 16.62 2.93 32.26 5.14
2310 4588 1.608717 AACTCCTGGTAGCAGCTCCG 61.609 60.000 16.62 3.06 0.00 4.63
2311 4589 0.107945 CAACTCCTGGTAGCAGCTCC 60.108 60.000 16.62 0.46 0.00 4.70
2312 4590 0.107945 CCAACTCCTGGTAGCAGCTC 60.108 60.000 16.62 0.00 40.78 4.09
2313 4591 1.986413 CCAACTCCTGGTAGCAGCT 59.014 57.895 16.62 0.00 40.78 4.24
2314 4592 4.625800 CCAACTCCTGGTAGCAGC 57.374 61.111 16.62 0.00 40.78 5.25
2322 4600 2.282462 GCACCCCACCAACTCCTG 60.282 66.667 0.00 0.00 0.00 3.86
2323 4601 2.776526 TGCACCCCACCAACTCCT 60.777 61.111 0.00 0.00 0.00 3.69
2324 4602 2.282462 CTGCACCCCACCAACTCC 60.282 66.667 0.00 0.00 0.00 3.85
2325 4603 1.600916 GACTGCACCCCACCAACTC 60.601 63.158 0.00 0.00 0.00 3.01
2326 4604 2.515901 GACTGCACCCCACCAACT 59.484 61.111 0.00 0.00 0.00 3.16
2327 4605 2.978010 CGACTGCACCCCACCAAC 60.978 66.667 0.00 0.00 0.00 3.77
2328 4606 4.263572 CCGACTGCACCCCACCAA 62.264 66.667 0.00 0.00 0.00 3.67
2333 4611 4.699522 GACACCCGACTGCACCCC 62.700 72.222 0.00 0.00 0.00 4.95
2335 4613 3.986006 TCGACACCCGACTGCACC 61.986 66.667 0.00 0.00 43.23 5.01
2378 4709 1.303888 TCGTCGTCCCTAGCCTTGT 60.304 57.895 0.00 0.00 0.00 3.16
2380 4711 1.753463 CCTCGTCGTCCCTAGCCTT 60.753 63.158 0.00 0.00 0.00 4.35
2454 5909 1.179174 CCGGCGAGATCCTGGTGATA 61.179 60.000 9.30 0.00 32.41 2.15
2496 5951 1.982938 GTCGACACCCTGTAGCCCT 60.983 63.158 11.55 0.00 0.00 5.19
2514 5969 1.667830 CGGCTACCACACACCACTG 60.668 63.158 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.