Multiple sequence alignment - TraesCS2B01G577500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G577500 chr2B 100.000 3407 0 0 1 3407 765793935 765790529 0.000000e+00 6292.0
1 TraesCS2B01G577500 chr2B 93.460 1422 90 1 989 2407 765586441 765587862 0.000000e+00 2108.0
2 TraesCS2B01G577500 chr2B 97.211 251 7 0 121 371 436266088 436266338 3.140000e-115 425.0
3 TraesCS2B01G577500 chr2D 93.382 1919 89 15 976 2884 624054191 624052301 0.000000e+00 2806.0
4 TraesCS2B01G577500 chr2D 92.898 1408 98 2 1014 2420 623947750 623949156 0.000000e+00 2045.0
5 TraesCS2B01G577500 chr2D 90.886 395 31 2 503 897 624054582 624054193 3.010000e-145 525.0
6 TraesCS2B01G577500 chr2D 94.686 207 9 2 3111 3315 624049008 624048802 1.530000e-83 320.0
7 TraesCS2B01G577500 chr2D 92.500 200 8 2 2870 3062 624049196 624048997 2.590000e-71 279.0
8 TraesCS2B01G577500 chr2D 92.233 103 7 1 3305 3407 624048674 624048573 9.850000e-31 145.0
9 TraesCS2B01G577500 chr2D 90.000 100 9 1 414 512 624055888 624055789 9.920000e-26 128.0
10 TraesCS2B01G577500 chr2D 93.590 78 4 1 1 78 624055978 624055902 7.730000e-22 115.0
11 TraesCS2B01G577500 chr2A 93.918 1447 84 3 976 2420 755340941 755339497 0.000000e+00 2182.0
12 TraesCS2B01G577500 chr2A 92.768 1438 94 7 989 2420 755118508 755119941 0.000000e+00 2071.0
13 TraesCS2B01G577500 chr2A 90.823 316 21 7 545 859 755341280 755340972 1.890000e-112 416.0
14 TraesCS2B01G577500 chr5D 83.193 1190 168 25 1129 2305 238670466 238669296 0.000000e+00 1061.0
15 TraesCS2B01G577500 chr5D 96.813 251 8 0 121 371 537372217 537371967 1.460000e-113 420.0
16 TraesCS2B01G577500 chr5D 100.000 44 0 0 371 414 445379971 445380014 7.840000e-12 82.4
17 TraesCS2B01G577500 chr7A 83.055 1198 164 27 1129 2305 262852442 262853621 0.000000e+00 1051.0
18 TraesCS2B01G577500 chr7A 90.090 333 18 8 2891 3214 316309974 316310300 5.260000e-113 418.0
19 TraesCS2B01G577500 chr7A 92.473 93 4 3 2891 2980 624968069 624968161 2.760000e-26 130.0
20 TraesCS2B01G577500 chr4A 86.364 968 116 10 989 1943 677272523 677273487 0.000000e+00 1042.0
21 TraesCS2B01G577500 chr4A 93.985 266 13 3 108 371 732750101 732749837 1.900000e-107 399.0
22 TraesCS2B01G577500 chr7B 82.590 1189 174 23 1129 2299 222553191 222554364 0.000000e+00 1018.0
23 TraesCS2B01G577500 chr7B 96.813 251 8 0 121 371 735987061 735986811 1.460000e-113 420.0
24 TraesCS2B01G577500 chr7D 88.565 446 34 11 2892 3324 617519582 617519141 3.010000e-145 525.0
25 TraesCS2B01G577500 chr7D 84.989 453 59 9 1129 1578 246373948 246374394 5.180000e-123 451.0
26 TraesCS2B01G577500 chr7D 87.311 331 42 0 992 1322 534357790 534357460 2.480000e-101 379.0
27 TraesCS2B01G577500 chr6A 87.054 448 40 12 2891 3324 323113523 323113966 1.100000e-134 490.0
28 TraesCS2B01G577500 chr6B 97.200 250 7 0 122 371 75528025 75528274 1.130000e-114 424.0
29 TraesCS2B01G577500 chr5B 97.200 250 7 0 122 371 530709266 530709515 1.130000e-114 424.0
30 TraesCS2B01G577500 chr5B 90.805 87 5 3 2891 2974 459552574 459552488 2.780000e-21 113.0
31 TraesCS2B01G577500 chr5B 100.000 44 0 0 371 414 296383988 296383945 7.840000e-12 82.4
32 TraesCS2B01G577500 chr4B 97.189 249 5 1 122 370 621674226 621673980 1.460000e-113 420.0
33 TraesCS2B01G577500 chr4B 87.970 266 17 10 2891 3143 508484183 508484446 1.990000e-77 300.0
34 TraesCS2B01G577500 chr4B 100.000 44 0 0 371 414 51633221 51633178 7.840000e-12 82.4
35 TraesCS2B01G577500 chr4B 100.000 44 0 0 371 414 408974582 408974539 7.840000e-12 82.4
36 TraesCS2B01G577500 chr4B 100.000 44 0 0 371 414 592204604 592204647 7.840000e-12 82.4
37 TraesCS2B01G577500 chr4B 100.000 44 0 0 371 414 622132009 622131966 7.840000e-12 82.4
38 TraesCS2B01G577500 chr1B 96.800 250 8 0 122 371 499193570 499193321 5.260000e-113 418.0
39 TraesCS2B01G577500 chrUn 91.186 295 19 3 123 414 60959673 60959963 8.860000e-106 394.0
40 TraesCS2B01G577500 chr1D 100.000 44 0 0 371 414 460986785 460986828 7.840000e-12 82.4
41 TraesCS2B01G577500 chr1A 100.000 44 0 0 371 414 284916661 284916704 7.840000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G577500 chr2B 765790529 765793935 3406 True 6292.000000 6292 100.000000 1 3407 1 chr2B.!!$R1 3406
1 TraesCS2B01G577500 chr2B 765586441 765587862 1421 False 2108.000000 2108 93.460000 989 2407 1 chr2B.!!$F2 1418
2 TraesCS2B01G577500 chr2D 623947750 623949156 1406 False 2045.000000 2045 92.898000 1014 2420 1 chr2D.!!$F1 1406
3 TraesCS2B01G577500 chr2D 624048573 624055978 7405 True 616.857143 2806 92.468143 1 3407 7 chr2D.!!$R1 3406
4 TraesCS2B01G577500 chr2A 755118508 755119941 1433 False 2071.000000 2071 92.768000 989 2420 1 chr2A.!!$F1 1431
5 TraesCS2B01G577500 chr2A 755339497 755341280 1783 True 1299.000000 2182 92.370500 545 2420 2 chr2A.!!$R1 1875
6 TraesCS2B01G577500 chr5D 238669296 238670466 1170 True 1061.000000 1061 83.193000 1129 2305 1 chr5D.!!$R1 1176
7 TraesCS2B01G577500 chr7A 262852442 262853621 1179 False 1051.000000 1051 83.055000 1129 2305 1 chr7A.!!$F1 1176
8 TraesCS2B01G577500 chr4A 677272523 677273487 964 False 1042.000000 1042 86.364000 989 1943 1 chr4A.!!$F1 954
9 TraesCS2B01G577500 chr7B 222553191 222554364 1173 False 1018.000000 1018 82.590000 1129 2299 1 chr7B.!!$F1 1170

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 330 0.031721 GACAGTTGGGAAGTCGTCGT 59.968 55.0 0.0 0.0 0.0 4.34 F
333 334 0.038892 GTTGGGAAGTCGTCGTGCTA 60.039 55.0 0.0 0.0 0.0 3.49 F
870 2096 0.106894 CCAGCCGATCCCTAAAGTCC 59.893 60.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1779 3011 0.179065 CCTTCATCAGCGATGCCTCA 60.179 55.0 11.98 0.00 39.63 3.86 R
2299 3556 0.402121 GGACTTCCCTTGCTCTTGGT 59.598 55.0 0.00 0.00 0.00 3.67 R
2758 4024 0.039978 TTACAATGCACGGGCGTTTG 60.040 50.0 16.00 18.39 46.90 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 5.940192 AAAAATTGCACTACATCTCACGA 57.060 34.783 0.00 0.00 0.00 4.35
108 109 5.940192 AAAATTGCACTACATCTCACGAA 57.060 34.783 0.00 0.00 0.00 3.85
109 110 6.500684 AAAATTGCACTACATCTCACGAAT 57.499 33.333 0.00 0.00 0.00 3.34
110 111 7.609760 AAAATTGCACTACATCTCACGAATA 57.390 32.000 0.00 0.00 0.00 1.75
123 124 5.109210 TCTCACGAATATTGCATCGACTTT 58.891 37.500 13.96 0.00 41.43 2.66
124 125 5.580691 TCTCACGAATATTGCATCGACTTTT 59.419 36.000 13.96 0.00 41.43 2.27
125 126 6.092122 TCTCACGAATATTGCATCGACTTTTT 59.908 34.615 13.96 0.00 41.43 1.94
152 153 9.689976 TTTGCAAGAAAATTTTCGATCTATTCA 57.310 25.926 21.98 11.42 41.92 2.57
153 154 9.859427 TTGCAAGAAAATTTTCGATCTATTCAT 57.141 25.926 21.98 1.40 41.92 2.57
154 155 9.507280 TGCAAGAAAATTTTCGATCTATTCATC 57.493 29.630 21.98 0.00 41.92 2.92
155 156 9.727627 GCAAGAAAATTTTCGATCTATTCATCT 57.272 29.630 21.98 0.43 41.92 2.90
175 176 8.352752 TCATCTTTAATCATAGCAGTACAACG 57.647 34.615 0.00 0.00 0.00 4.10
176 177 8.194769 TCATCTTTAATCATAGCAGTACAACGA 58.805 33.333 0.00 0.00 0.00 3.85
177 178 8.817100 CATCTTTAATCATAGCAGTACAACGAA 58.183 33.333 0.00 0.00 0.00 3.85
178 179 8.942338 TCTTTAATCATAGCAGTACAACGAAT 57.058 30.769 0.00 0.00 0.00 3.34
181 182 8.583810 TTAATCATAGCAGTACAACGAATACC 57.416 34.615 0.00 0.00 0.00 2.73
182 183 5.585820 TCATAGCAGTACAACGAATACCA 57.414 39.130 0.00 0.00 0.00 3.25
183 184 5.588240 TCATAGCAGTACAACGAATACCAG 58.412 41.667 0.00 0.00 0.00 4.00
184 185 5.358725 TCATAGCAGTACAACGAATACCAGA 59.641 40.000 0.00 0.00 0.00 3.86
185 186 4.530710 AGCAGTACAACGAATACCAGAA 57.469 40.909 0.00 0.00 0.00 3.02
186 187 4.890088 AGCAGTACAACGAATACCAGAAA 58.110 39.130 0.00 0.00 0.00 2.52
187 188 5.488341 AGCAGTACAACGAATACCAGAAAT 58.512 37.500 0.00 0.00 0.00 2.17
188 189 6.636705 AGCAGTACAACGAATACCAGAAATA 58.363 36.000 0.00 0.00 0.00 1.40
189 190 7.101054 AGCAGTACAACGAATACCAGAAATAA 58.899 34.615 0.00 0.00 0.00 1.40
190 191 7.769044 AGCAGTACAACGAATACCAGAAATAAT 59.231 33.333 0.00 0.00 0.00 1.28
191 192 9.037737 GCAGTACAACGAATACCAGAAATAATA 57.962 33.333 0.00 0.00 0.00 0.98
216 217 7.684529 AGAAATTACATCCAGATCCATAGACC 58.315 38.462 0.00 0.00 0.00 3.85
217 218 7.293299 AGAAATTACATCCAGATCCATAGACCA 59.707 37.037 0.00 0.00 0.00 4.02
218 219 5.808366 TTACATCCAGATCCATAGACCAC 57.192 43.478 0.00 0.00 0.00 4.16
219 220 2.975489 ACATCCAGATCCATAGACCACC 59.025 50.000 0.00 0.00 0.00 4.61
220 221 3.246301 CATCCAGATCCATAGACCACCT 58.754 50.000 0.00 0.00 0.00 4.00
221 222 4.140686 ACATCCAGATCCATAGACCACCTA 60.141 45.833 0.00 0.00 0.00 3.08
222 223 4.119556 TCCAGATCCATAGACCACCTAG 57.880 50.000 0.00 0.00 0.00 3.02
223 224 2.564947 CCAGATCCATAGACCACCTAGC 59.435 54.545 0.00 0.00 0.00 3.42
224 225 2.230025 CAGATCCATAGACCACCTAGCG 59.770 54.545 0.00 0.00 0.00 4.26
225 226 2.108425 AGATCCATAGACCACCTAGCGA 59.892 50.000 0.00 0.00 0.00 4.93
226 227 1.688772 TCCATAGACCACCTAGCGAC 58.311 55.000 0.00 0.00 0.00 5.19
227 228 1.064240 TCCATAGACCACCTAGCGACA 60.064 52.381 0.00 0.00 0.00 4.35
228 229 1.754803 CCATAGACCACCTAGCGACAA 59.245 52.381 0.00 0.00 0.00 3.18
229 230 2.481449 CCATAGACCACCTAGCGACAAC 60.481 54.545 0.00 0.00 0.00 3.32
230 231 2.211250 TAGACCACCTAGCGACAACT 57.789 50.000 0.00 0.00 0.00 3.16
231 232 2.211250 AGACCACCTAGCGACAACTA 57.789 50.000 0.00 0.00 0.00 2.24
232 233 1.817447 AGACCACCTAGCGACAACTAC 59.183 52.381 0.00 0.00 0.00 2.73
233 234 0.893447 ACCACCTAGCGACAACTACC 59.107 55.000 0.00 0.00 0.00 3.18
234 235 0.892755 CCACCTAGCGACAACTACCA 59.107 55.000 0.00 0.00 0.00 3.25
235 236 1.135083 CCACCTAGCGACAACTACCAG 60.135 57.143 0.00 0.00 0.00 4.00
236 237 0.531200 ACCTAGCGACAACTACCAGC 59.469 55.000 0.00 0.00 0.00 4.85
237 238 0.530744 CCTAGCGACAACTACCAGCA 59.469 55.000 0.00 0.00 0.00 4.41
238 239 1.630148 CTAGCGACAACTACCAGCAC 58.370 55.000 0.00 0.00 0.00 4.40
239 240 1.202582 CTAGCGACAACTACCAGCACT 59.797 52.381 0.00 0.00 0.00 4.40
240 241 0.319900 AGCGACAACTACCAGCACTG 60.320 55.000 0.00 0.00 0.00 3.66
241 242 0.319555 GCGACAACTACCAGCACTGA 60.320 55.000 0.00 0.00 0.00 3.41
242 243 1.872237 GCGACAACTACCAGCACTGAA 60.872 52.381 0.00 0.00 0.00 3.02
243 244 2.061773 CGACAACTACCAGCACTGAAG 58.938 52.381 0.00 0.00 0.00 3.02
244 245 1.801178 GACAACTACCAGCACTGAAGC 59.199 52.381 0.00 0.00 0.00 3.86
245 246 0.792640 CAACTACCAGCACTGAAGCG 59.207 55.000 0.00 0.00 40.15 4.68
246 247 0.679505 AACTACCAGCACTGAAGCGA 59.320 50.000 0.00 0.00 40.15 4.93
247 248 0.244994 ACTACCAGCACTGAAGCGAG 59.755 55.000 0.00 0.00 40.15 5.03
248 249 1.079819 TACCAGCACTGAAGCGAGC 60.080 57.895 0.00 0.00 40.15 5.03
249 250 2.507110 TACCAGCACTGAAGCGAGCC 62.507 60.000 0.00 0.00 40.15 4.70
250 251 3.485431 CAGCACTGAAGCGAGCCG 61.485 66.667 0.00 0.00 40.15 5.52
251 252 3.684990 AGCACTGAAGCGAGCCGA 61.685 61.111 0.00 0.00 40.15 5.54
252 253 2.738521 GCACTGAAGCGAGCCGAA 60.739 61.111 0.00 0.00 0.00 4.30
253 254 2.734673 GCACTGAAGCGAGCCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
279 280 3.550431 CCGTCATCGCCCCTCCAT 61.550 66.667 0.00 0.00 35.54 3.41
280 281 2.029666 CGTCATCGCCCCTCCATC 59.970 66.667 0.00 0.00 0.00 3.51
281 282 2.029666 GTCATCGCCCCTCCATCG 59.970 66.667 0.00 0.00 0.00 3.84
282 283 3.928779 TCATCGCCCCTCCATCGC 61.929 66.667 0.00 0.00 0.00 4.58
283 284 4.996434 CATCGCCCCTCCATCGCC 62.996 72.222 0.00 0.00 0.00 5.54
300 301 2.030562 CGGAGTCGGGCACAACTT 59.969 61.111 0.00 0.00 0.00 2.66
301 302 2.317609 CGGAGTCGGGCACAACTTG 61.318 63.158 0.00 0.00 0.00 3.16
302 303 1.227853 GGAGTCGGGCACAACTTGT 60.228 57.895 0.00 0.00 0.00 3.16
303 304 0.818040 GGAGTCGGGCACAACTTGTT 60.818 55.000 0.00 0.00 0.00 2.83
304 305 0.307760 GAGTCGGGCACAACTTGTTG 59.692 55.000 11.44 11.44 0.00 3.33
305 306 0.393808 AGTCGGGCACAACTTGTTGT 60.394 50.000 12.73 12.73 35.14 3.32
306 307 1.134340 AGTCGGGCACAACTTGTTGTA 60.134 47.619 17.26 1.01 33.17 2.41
307 308 1.263217 GTCGGGCACAACTTGTTGTAG 59.737 52.381 17.26 12.96 33.17 2.74
308 309 1.134340 TCGGGCACAACTTGTTGTAGT 60.134 47.619 17.26 0.00 33.17 2.73
309 310 2.102757 TCGGGCACAACTTGTTGTAGTA 59.897 45.455 17.26 1.74 33.17 1.82
310 311 2.478894 CGGGCACAACTTGTTGTAGTAG 59.521 50.000 17.26 7.80 33.17 2.57
311 312 3.735591 GGGCACAACTTGTTGTAGTAGA 58.264 45.455 17.26 0.00 33.17 2.59
312 313 3.497262 GGGCACAACTTGTTGTAGTAGAC 59.503 47.826 17.26 8.51 33.17 2.59
313 314 4.124238 GGCACAACTTGTTGTAGTAGACA 58.876 43.478 17.26 0.00 35.78 3.41
314 315 4.211374 GGCACAACTTGTTGTAGTAGACAG 59.789 45.833 17.26 5.63 39.88 3.51
315 316 4.809426 GCACAACTTGTTGTAGTAGACAGT 59.191 41.667 17.26 0.00 39.88 3.55
316 317 5.293569 GCACAACTTGTTGTAGTAGACAGTT 59.706 40.000 17.26 0.00 39.88 3.16
317 318 6.705782 CACAACTTGTTGTAGTAGACAGTTG 58.294 40.000 17.26 16.66 39.88 3.16
318 319 5.815740 ACAACTTGTTGTAGTAGACAGTTGG 59.184 40.000 16.35 10.64 39.88 3.77
319 320 4.957296 ACTTGTTGTAGTAGACAGTTGGG 58.043 43.478 0.00 0.00 39.88 4.12
320 321 4.652421 ACTTGTTGTAGTAGACAGTTGGGA 59.348 41.667 0.00 0.00 39.88 4.37
321 322 5.129815 ACTTGTTGTAGTAGACAGTTGGGAA 59.870 40.000 0.00 0.00 39.88 3.97
322 323 5.209818 TGTTGTAGTAGACAGTTGGGAAG 57.790 43.478 0.00 0.00 39.88 3.46
323 324 4.652421 TGTTGTAGTAGACAGTTGGGAAGT 59.348 41.667 0.00 0.00 39.88 3.01
324 325 5.221382 TGTTGTAGTAGACAGTTGGGAAGTC 60.221 44.000 0.00 0.00 39.88 3.01
325 326 3.504906 TGTAGTAGACAGTTGGGAAGTCG 59.495 47.826 0.00 0.00 37.36 4.18
326 327 2.595238 AGTAGACAGTTGGGAAGTCGT 58.405 47.619 0.00 0.00 37.36 4.34
327 328 2.557490 AGTAGACAGTTGGGAAGTCGTC 59.443 50.000 0.00 0.00 37.36 4.20
328 329 0.314302 AGACAGTTGGGAAGTCGTCG 59.686 55.000 0.00 0.00 37.36 5.12
329 330 0.031721 GACAGTTGGGAAGTCGTCGT 59.968 55.000 0.00 0.00 0.00 4.34
330 331 0.249322 ACAGTTGGGAAGTCGTCGTG 60.249 55.000 0.00 0.00 0.00 4.35
331 332 1.300697 AGTTGGGAAGTCGTCGTGC 60.301 57.895 0.00 0.00 0.00 5.34
332 333 1.300697 GTTGGGAAGTCGTCGTGCT 60.301 57.895 0.00 0.00 0.00 4.40
333 334 0.038892 GTTGGGAAGTCGTCGTGCTA 60.039 55.000 0.00 0.00 0.00 3.49
334 335 0.675083 TTGGGAAGTCGTCGTGCTAA 59.325 50.000 0.00 0.00 0.00 3.09
335 336 0.242825 TGGGAAGTCGTCGTGCTAAG 59.757 55.000 0.00 0.00 0.00 2.18
336 337 0.458025 GGGAAGTCGTCGTGCTAAGG 60.458 60.000 0.00 0.00 0.00 2.69
337 338 1.077089 GGAAGTCGTCGTGCTAAGGC 61.077 60.000 0.00 0.00 39.26 4.35
338 339 1.077089 GAAGTCGTCGTGCTAAGGCC 61.077 60.000 0.00 0.00 37.74 5.19
339 340 2.502692 AAGTCGTCGTGCTAAGGCCC 62.503 60.000 0.00 0.00 37.74 5.80
340 341 3.766691 TCGTCGTGCTAAGGCCCC 61.767 66.667 0.00 0.00 37.74 5.80
342 343 4.078516 GTCGTGCTAAGGCCCCGT 62.079 66.667 0.00 0.00 37.74 5.28
343 344 2.362760 TCGTGCTAAGGCCCCGTA 60.363 61.111 0.00 0.00 37.74 4.02
344 345 2.106332 CGTGCTAAGGCCCCGTAG 59.894 66.667 0.00 0.00 37.74 3.51
345 346 2.504519 GTGCTAAGGCCCCGTAGG 59.495 66.667 0.00 0.00 41.97 3.18
346 347 2.062177 GTGCTAAGGCCCCGTAGGA 61.062 63.158 0.00 0.00 45.58 2.94
357 358 4.063967 CGTAGGACCAGCGCACCA 62.064 66.667 11.47 0.00 0.00 4.17
358 359 2.125512 GTAGGACCAGCGCACCAG 60.126 66.667 11.47 0.00 0.00 4.00
359 360 2.283604 TAGGACCAGCGCACCAGA 60.284 61.111 11.47 0.00 0.00 3.86
360 361 1.911269 TAGGACCAGCGCACCAGAA 60.911 57.895 11.47 0.00 0.00 3.02
361 362 2.167398 TAGGACCAGCGCACCAGAAC 62.167 60.000 11.47 0.00 0.00 3.01
362 363 2.280797 GACCAGCGCACCAGAACA 60.281 61.111 11.47 0.00 0.00 3.18
363 364 2.281070 ACCAGCGCACCAGAACAG 60.281 61.111 11.47 0.00 0.00 3.16
364 365 3.730761 CCAGCGCACCAGAACAGC 61.731 66.667 11.47 0.00 0.00 4.40
365 366 2.974148 CAGCGCACCAGAACAGCA 60.974 61.111 11.47 0.00 0.00 4.41
366 367 2.203195 AGCGCACCAGAACAGCAA 60.203 55.556 11.47 0.00 0.00 3.91
367 368 2.050985 GCGCACCAGAACAGCAAC 60.051 61.111 0.30 0.00 0.00 4.17
368 369 2.639286 CGCACCAGAACAGCAACC 59.361 61.111 0.00 0.00 0.00 3.77
369 370 2.639286 GCACCAGAACAGCAACCG 59.361 61.111 0.00 0.00 0.00 4.44
370 371 2.639286 CACCAGAACAGCAACCGC 59.361 61.111 0.00 0.00 38.99 5.68
386 387 4.947147 GCTCCACACGCCCACCAA 62.947 66.667 0.00 0.00 0.00 3.67
387 388 2.978010 CTCCACACGCCCACCAAC 60.978 66.667 0.00 0.00 0.00 3.77
388 389 4.920112 TCCACACGCCCACCAACG 62.920 66.667 0.00 0.00 0.00 4.10
389 390 4.920112 CCACACGCCCACCAACGA 62.920 66.667 0.00 0.00 0.00 3.85
390 391 2.668212 CACACGCCCACCAACGAT 60.668 61.111 0.00 0.00 0.00 3.73
391 392 2.668212 ACACGCCCACCAACGATG 60.668 61.111 0.00 0.00 0.00 3.84
392 393 4.101790 CACGCCCACCAACGATGC 62.102 66.667 0.00 0.00 0.00 3.91
393 394 4.329545 ACGCCCACCAACGATGCT 62.330 61.111 0.00 0.00 0.00 3.79
394 395 2.125310 CGCCCACCAACGATGCTA 60.125 61.111 0.00 0.00 0.00 3.49
395 396 2.173669 CGCCCACCAACGATGCTAG 61.174 63.158 0.00 0.00 0.00 3.42
396 397 1.220749 GCCCACCAACGATGCTAGA 59.779 57.895 0.00 0.00 0.00 2.43
397 398 1.090052 GCCCACCAACGATGCTAGAC 61.090 60.000 0.00 0.00 0.00 2.59
398 399 0.806102 CCCACCAACGATGCTAGACG 60.806 60.000 0.00 0.00 0.00 4.18
399 400 1.421410 CCACCAACGATGCTAGACGC 61.421 60.000 0.00 0.00 39.77 5.19
407 408 4.569023 TGCTAGACGCATCGCCGG 62.569 66.667 0.00 0.00 45.47 6.13
408 409 4.266070 GCTAGACGCATCGCCGGA 62.266 66.667 5.05 0.00 38.92 5.14
409 410 2.411701 CTAGACGCATCGCCGGAA 59.588 61.111 5.05 0.00 0.00 4.30
410 411 1.944676 CTAGACGCATCGCCGGAAC 60.945 63.158 5.05 0.00 0.00 3.62
437 438 5.621193 ACATAACCAAGTCTTAGCAACACT 58.379 37.500 0.00 0.00 0.00 3.55
441 442 3.877508 ACCAAGTCTTAGCAACACTGTTC 59.122 43.478 0.00 0.00 0.00 3.18
474 475 8.836413 AGATGATTACATGTAAACCAATTACGG 58.164 33.333 21.57 0.00 45.72 4.02
478 479 1.451067 TGTAAACCAATTACGGGCCG 58.549 50.000 27.06 27.06 45.72 6.13
481 482 4.807631 ACCAATTACGGGCCGCCC 62.808 66.667 28.71 19.64 41.09 6.13
526 1744 5.446143 TTTCTAGTTACGTTGTAACCCGA 57.554 39.130 14.39 9.42 0.00 5.14
559 1777 2.249844 TCCTGAACCAAAGACGTTCC 57.750 50.000 0.00 0.00 39.10 3.62
575 1793 2.438434 CCCCGGCTGCTAGTTTGG 60.438 66.667 0.00 0.00 0.00 3.28
585 1803 3.181478 GCTGCTAGTTTGGGATACTACGT 60.181 47.826 0.00 0.00 0.00 3.57
769 1987 2.740826 GCGCGCCAAACTACCTCA 60.741 61.111 23.24 0.00 0.00 3.86
821 2039 2.052690 CCCGATCACGACTCCAGGT 61.053 63.158 0.00 0.00 42.66 4.00
858 2084 5.955959 ACCAGTATATATAATCACCAGCCGA 59.044 40.000 0.00 0.00 0.00 5.54
859 2085 6.611642 ACCAGTATATATAATCACCAGCCGAT 59.388 38.462 0.00 0.00 0.00 4.18
860 2086 7.148641 CCAGTATATATAATCACCAGCCGATC 58.851 42.308 0.00 0.00 0.00 3.69
861 2087 7.148641 CAGTATATATAATCACCAGCCGATCC 58.851 42.308 0.00 0.00 0.00 3.36
862 2088 3.914426 ATATAATCACCAGCCGATCCC 57.086 47.619 0.00 0.00 0.00 3.85
863 2089 1.734655 ATAATCACCAGCCGATCCCT 58.265 50.000 0.00 0.00 0.00 4.20
864 2090 2.391926 TAATCACCAGCCGATCCCTA 57.608 50.000 0.00 0.00 0.00 3.53
865 2091 1.507140 AATCACCAGCCGATCCCTAA 58.493 50.000 0.00 0.00 0.00 2.69
866 2092 1.507140 ATCACCAGCCGATCCCTAAA 58.493 50.000 0.00 0.00 0.00 1.85
867 2093 0.830648 TCACCAGCCGATCCCTAAAG 59.169 55.000 0.00 0.00 0.00 1.85
868 2094 0.541863 CACCAGCCGATCCCTAAAGT 59.458 55.000 0.00 0.00 0.00 2.66
869 2095 0.831307 ACCAGCCGATCCCTAAAGTC 59.169 55.000 0.00 0.00 0.00 3.01
870 2096 0.106894 CCAGCCGATCCCTAAAGTCC 59.893 60.000 0.00 0.00 0.00 3.85
912 2138 4.014847 GATCGATCGAAACAAATTGCCA 57.985 40.909 23.50 0.00 0.00 4.92
913 2139 3.196007 TCGATCGAAACAAATTGCCAC 57.804 42.857 16.99 0.00 0.00 5.01
914 2140 2.095466 TCGATCGAAACAAATTGCCACC 60.095 45.455 16.99 0.00 0.00 4.61
915 2141 2.095263 CGATCGAAACAAATTGCCACCT 60.095 45.455 10.26 0.00 0.00 4.00
916 2142 3.501950 GATCGAAACAAATTGCCACCTC 58.498 45.455 0.00 0.00 0.00 3.85
917 2143 1.265635 TCGAAACAAATTGCCACCTCG 59.734 47.619 0.00 0.00 0.00 4.63
918 2144 1.001815 CGAAACAAATTGCCACCTCGT 60.002 47.619 0.00 0.00 0.00 4.18
919 2145 2.224549 CGAAACAAATTGCCACCTCGTA 59.775 45.455 0.00 0.00 0.00 3.43
920 2146 3.561503 GAAACAAATTGCCACCTCGTAC 58.438 45.455 0.00 0.00 0.00 3.67
921 2147 1.153353 ACAAATTGCCACCTCGTACG 58.847 50.000 9.53 9.53 0.00 3.67
922 2148 1.153353 CAAATTGCCACCTCGTACGT 58.847 50.000 16.05 0.00 0.00 3.57
923 2149 2.288948 ACAAATTGCCACCTCGTACGTA 60.289 45.455 16.05 0.00 0.00 3.57
924 2150 2.000429 AATTGCCACCTCGTACGTAC 58.000 50.000 15.90 15.90 0.00 3.67
937 2163 3.024991 CGTACGTACGTGACAGAATAGC 58.975 50.000 33.95 6.70 44.13 2.97
938 2164 3.242220 CGTACGTACGTGACAGAATAGCT 60.242 47.826 33.95 1.07 44.13 3.32
939 2165 3.844577 ACGTACGTGACAGAATAGCTT 57.155 42.857 22.14 0.00 0.00 3.74
940 2166 4.170292 ACGTACGTGACAGAATAGCTTT 57.830 40.909 22.14 0.00 0.00 3.51
941 2167 4.164294 ACGTACGTGACAGAATAGCTTTC 58.836 43.478 22.14 0.00 0.00 2.62
942 2168 3.237660 CGTACGTGACAGAATAGCTTTCG 59.762 47.826 7.22 0.00 0.00 3.46
943 2169 3.570926 ACGTGACAGAATAGCTTTCGA 57.429 42.857 0.00 0.00 0.00 3.71
944 2170 4.111375 ACGTGACAGAATAGCTTTCGAT 57.889 40.909 0.00 0.00 0.00 3.59
945 2171 4.106197 ACGTGACAGAATAGCTTTCGATC 58.894 43.478 0.00 0.57 0.00 3.69
946 2172 3.178618 CGTGACAGAATAGCTTTCGATCG 59.821 47.826 9.36 9.36 0.00 3.69
947 2173 4.352039 GTGACAGAATAGCTTTCGATCGA 58.648 43.478 15.15 15.15 0.00 3.59
948 2174 4.439449 GTGACAGAATAGCTTTCGATCGAG 59.561 45.833 18.54 8.98 0.00 4.04
949 2175 3.376540 ACAGAATAGCTTTCGATCGAGC 58.623 45.455 18.54 18.61 39.17 5.03
950 2176 2.728839 CAGAATAGCTTTCGATCGAGCC 59.271 50.000 21.59 12.97 39.71 4.70
951 2177 2.625790 AGAATAGCTTTCGATCGAGCCT 59.374 45.455 21.59 18.25 39.71 4.58
952 2178 2.715737 ATAGCTTTCGATCGAGCCTC 57.284 50.000 21.59 11.70 39.71 4.70
953 2179 0.308068 TAGCTTTCGATCGAGCCTCG 59.692 55.000 21.59 8.05 42.10 4.63
969 2195 2.403987 CGAGTCCTCGTACTGCCG 59.596 66.667 8.50 0.00 46.99 5.69
970 2196 2.396955 CGAGTCCTCGTACTGCCGT 61.397 63.158 8.50 0.00 46.99 5.68
971 2197 1.136984 GAGTCCTCGTACTGCCGTG 59.863 63.158 0.00 0.00 0.00 4.94
972 2198 1.303074 AGTCCTCGTACTGCCGTGA 60.303 57.895 0.00 0.00 0.00 4.35
973 2199 1.154073 GTCCTCGTACTGCCGTGAC 60.154 63.158 0.00 0.00 0.00 3.67
974 2200 2.202440 CCTCGTACTGCCGTGACG 60.202 66.667 0.00 0.00 37.93 4.35
987 2213 1.881602 GTGACGACCTAAGCCGAGT 59.118 57.895 0.00 0.00 0.00 4.18
1420 2652 2.872370 GGTACGAAGCTAATGACGTGT 58.128 47.619 0.00 0.00 39.28 4.49
1425 2657 1.804151 GAAGCTAATGACGTGTTGCCA 59.196 47.619 0.00 0.00 0.00 4.92
1590 2822 3.283303 GAGCTCGTGGACTGCTCT 58.717 61.111 0.00 0.00 46.69 4.09
1602 2834 4.393155 TGCTCTCGCAACGGGCAT 62.393 61.111 2.26 0.00 44.62 4.40
1759 2991 1.511305 GTCTCCATCGACGGCTTCA 59.489 57.895 0.00 0.00 0.00 3.02
1869 3109 1.451567 CCAGCTCTACGAGTCCGGA 60.452 63.158 0.00 0.00 40.78 5.14
2149 3406 4.436998 GCTACAGCTCGTGCCCGT 62.437 66.667 5.73 6.61 40.80 5.28
2196 3453 2.740055 GTGAGGAGCGTGTGCCTG 60.740 66.667 0.00 0.00 44.31 4.85
2299 3556 1.896660 GCTGGGAAACGAACCTGCA 60.897 57.895 7.56 0.00 46.93 4.41
2391 3648 3.006247 GGTCTCAGAGCTTGTTGATTCC 58.994 50.000 0.00 0.00 0.00 3.01
2485 3742 7.010923 GTCCTGATAATGTAGCAGTCTTTCTTG 59.989 40.741 0.39 0.00 40.43 3.02
2486 3743 6.259608 CCTGATAATGTAGCAGTCTTTCTTGG 59.740 42.308 0.39 0.00 40.43 3.61
2487 3744 6.115446 TGATAATGTAGCAGTCTTTCTTGGG 58.885 40.000 0.00 0.00 0.00 4.12
2488 3745 4.640771 AATGTAGCAGTCTTTCTTGGGA 57.359 40.909 0.00 0.00 0.00 4.37
2489 3746 4.640771 ATGTAGCAGTCTTTCTTGGGAA 57.359 40.909 0.00 0.00 0.00 3.97
2490 3747 3.740115 TGTAGCAGTCTTTCTTGGGAAC 58.260 45.455 0.00 0.00 0.00 3.62
2491 3748 3.391296 TGTAGCAGTCTTTCTTGGGAACT 59.609 43.478 0.00 0.00 0.00 3.01
2492 3749 4.591498 TGTAGCAGTCTTTCTTGGGAACTA 59.409 41.667 0.00 0.00 0.00 2.24
2493 3750 4.278975 AGCAGTCTTTCTTGGGAACTAG 57.721 45.455 0.00 0.00 34.24 2.57
2494 3751 2.744741 GCAGTCTTTCTTGGGAACTAGC 59.255 50.000 0.00 0.00 32.87 3.42
2495 3752 3.558109 GCAGTCTTTCTTGGGAACTAGCT 60.558 47.826 0.00 0.00 32.87 3.32
2601 3867 6.422776 ACATTTGTTGATCTATCGGTTGAC 57.577 37.500 0.00 0.00 0.00 3.18
2641 3907 2.693591 TCAAGTGATCTATCGGTCACCC 59.306 50.000 7.00 0.00 44.43 4.61
2642 3908 2.695666 CAAGTGATCTATCGGTCACCCT 59.304 50.000 7.00 0.00 44.43 4.34
2643 3909 3.033659 AGTGATCTATCGGTCACCCTT 57.966 47.619 7.00 0.00 44.43 3.95
2644 3910 2.695666 AGTGATCTATCGGTCACCCTTG 59.304 50.000 7.00 0.00 44.43 3.61
2645 3911 1.412710 TGATCTATCGGTCACCCTTGC 59.587 52.381 0.00 0.00 0.00 4.01
2646 3912 1.689273 GATCTATCGGTCACCCTTGCT 59.311 52.381 0.00 0.00 0.00 3.91
2647 3913 2.447408 TCTATCGGTCACCCTTGCTA 57.553 50.000 0.00 0.00 0.00 3.49
2648 3914 2.742348 TCTATCGGTCACCCTTGCTAA 58.258 47.619 0.00 0.00 0.00 3.09
2649 3915 3.305720 TCTATCGGTCACCCTTGCTAAT 58.694 45.455 0.00 0.00 0.00 1.73
2650 3916 3.709653 TCTATCGGTCACCCTTGCTAATT 59.290 43.478 0.00 0.00 0.00 1.40
2651 3917 2.396590 TCGGTCACCCTTGCTAATTC 57.603 50.000 0.00 0.00 0.00 2.17
2652 3918 1.006832 CGGTCACCCTTGCTAATTCG 58.993 55.000 0.00 0.00 0.00 3.34
2653 3919 1.404986 CGGTCACCCTTGCTAATTCGA 60.405 52.381 0.00 0.00 0.00 3.71
2654 3920 2.741878 CGGTCACCCTTGCTAATTCGAT 60.742 50.000 0.00 0.00 0.00 3.59
2655 3921 2.872858 GGTCACCCTTGCTAATTCGATC 59.127 50.000 0.00 0.00 0.00 3.69
2656 3922 2.872858 GTCACCCTTGCTAATTCGATCC 59.127 50.000 0.00 0.00 0.00 3.36
2657 3923 2.503765 TCACCCTTGCTAATTCGATCCA 59.496 45.455 0.00 0.00 0.00 3.41
2658 3924 2.614057 CACCCTTGCTAATTCGATCCAC 59.386 50.000 0.00 0.00 0.00 4.02
2659 3925 2.238646 ACCCTTGCTAATTCGATCCACA 59.761 45.455 0.00 0.00 0.00 4.17
2671 3937 5.766150 TTCGATCCACAGTTGTTTCAAAT 57.234 34.783 0.00 0.00 0.00 2.32
2675 3941 7.708051 TCGATCCACAGTTGTTTCAAATTTTA 58.292 30.769 0.00 0.00 0.00 1.52
2725 3991 0.527113 TGCATGACAGCCGATTTTGG 59.473 50.000 0.00 0.00 0.00 3.28
2730 3996 1.202758 TGACAGCCGATTTTGGACACT 60.203 47.619 0.00 0.00 0.00 3.55
2745 4011 9.772973 ATTTTGGACACTTTTAACCTATTTTCC 57.227 29.630 0.00 0.00 0.00 3.13
2758 4024 6.819397 ACCTATTTTCCAAGAAACTAGCAC 57.181 37.500 8.26 0.00 0.00 4.40
2762 4028 7.595130 CCTATTTTCCAAGAAACTAGCACAAAC 59.405 37.037 8.26 0.00 0.00 2.93
2764 4030 2.289547 TCCAAGAAACTAGCACAAACGC 59.710 45.455 0.00 0.00 0.00 4.84
2774 4040 2.015627 CACAAACGCCCGTGCATTG 61.016 57.895 4.29 4.29 38.94 2.82
2801 4067 3.245048 GGAAAAGAAAATTGGCGTGTGTG 59.755 43.478 0.00 0.00 0.00 3.82
2818 4084 1.007964 TGCACAAAATTGTCCGCCG 60.008 52.632 0.00 0.00 39.91 6.46
2846 4112 3.887621 ACAACGGCATCAGTATAGTGT 57.112 42.857 7.44 0.00 0.00 3.55
2850 4116 2.100916 ACGGCATCAGTATAGTGTCACC 59.899 50.000 7.44 6.48 0.00 4.02
2868 4134 0.532862 CCTGACAGCGACAAACAGGT 60.533 55.000 0.00 0.00 41.91 4.00
2899 7285 7.229506 ACCGTGATTTTGAAGAAGAAAGAATCT 59.770 33.333 0.00 0.00 41.32 2.40
2905 7292 9.884465 ATTTTGAAGAAGAAAGAATCTAACACG 57.116 29.630 0.00 0.00 37.42 4.49
2980 7367 5.919272 CATGAGTAACTATCCATGCACTG 57.081 43.478 0.00 0.00 31.43 3.66
2989 7376 9.116067 GTAACTATCCATGCACTGGTAAATTTA 57.884 33.333 12.89 0.00 46.08 1.40
3047 7434 5.537188 TGTTTTGTTTATCTCATGCAACCC 58.463 37.500 0.00 0.00 0.00 4.11
3048 7435 5.069648 TGTTTTGTTTATCTCATGCAACCCA 59.930 36.000 0.00 0.00 0.00 4.51
3049 7436 5.389859 TTTGTTTATCTCATGCAACCCAG 57.610 39.130 0.00 0.00 0.00 4.45
3051 7438 4.661222 TGTTTATCTCATGCAACCCAGAA 58.339 39.130 0.00 0.00 0.00 3.02
3052 7439 5.263599 TGTTTATCTCATGCAACCCAGAAT 58.736 37.500 0.00 0.00 0.00 2.40
3054 7441 2.425143 TCTCATGCAACCCAGAATCC 57.575 50.000 0.00 0.00 0.00 3.01
3055 7442 1.918262 TCTCATGCAACCCAGAATCCT 59.082 47.619 0.00 0.00 0.00 3.24
3056 7443 3.114606 TCTCATGCAACCCAGAATCCTA 58.885 45.455 0.00 0.00 0.00 2.94
3057 7444 3.718434 TCTCATGCAACCCAGAATCCTAT 59.282 43.478 0.00 0.00 0.00 2.57
3058 7445 4.166725 TCTCATGCAACCCAGAATCCTATT 59.833 41.667 0.00 0.00 0.00 1.73
3059 7446 4.870636 TCATGCAACCCAGAATCCTATTT 58.129 39.130 0.00 0.00 0.00 1.40
3060 7447 6.012337 TCATGCAACCCAGAATCCTATTTA 57.988 37.500 0.00 0.00 0.00 1.40
3061 7448 6.430864 TCATGCAACCCAGAATCCTATTTAA 58.569 36.000 0.00 0.00 0.00 1.52
3062 7449 6.894654 TCATGCAACCCAGAATCCTATTTAAA 59.105 34.615 0.00 0.00 0.00 1.52
3063 7450 7.564660 TCATGCAACCCAGAATCCTATTTAAAT 59.435 33.333 5.89 5.89 0.00 1.40
3064 7451 7.346751 TGCAACCCAGAATCCTATTTAAATC 57.653 36.000 3.39 0.00 0.00 2.17
3065 7452 6.039270 TGCAACCCAGAATCCTATTTAAATCG 59.961 38.462 3.39 0.00 0.00 3.34
3066 7453 6.039382 GCAACCCAGAATCCTATTTAAATCGT 59.961 38.462 3.39 0.00 0.00 3.73
3067 7454 7.417612 CAACCCAGAATCCTATTTAAATCGTG 58.582 38.462 3.39 0.00 0.00 4.35
3068 7455 6.659824 ACCCAGAATCCTATTTAAATCGTGT 58.340 36.000 3.39 0.00 0.00 4.49
3069 7456 6.766467 ACCCAGAATCCTATTTAAATCGTGTC 59.234 38.462 3.39 0.00 0.00 3.67
3070 7457 6.992715 CCCAGAATCCTATTTAAATCGTGTCT 59.007 38.462 3.39 0.40 0.00 3.41
3071 7458 7.499232 CCCAGAATCCTATTTAAATCGTGTCTT 59.501 37.037 3.39 0.00 0.00 3.01
3072 7459 8.893727 CCAGAATCCTATTTAAATCGTGTCTTT 58.106 33.333 3.39 0.00 0.00 2.52
3077 7464 8.857694 TCCTATTTAAATCGTGTCTTTTTCCT 57.142 30.769 3.39 0.00 0.00 3.36
3078 7465 9.292195 TCCTATTTAAATCGTGTCTTTTTCCTT 57.708 29.630 3.39 0.00 0.00 3.36
3079 7466 9.341899 CCTATTTAAATCGTGTCTTTTTCCTTG 57.658 33.333 3.39 0.00 0.00 3.61
3080 7467 9.893305 CTATTTAAATCGTGTCTTTTTCCTTGT 57.107 29.630 3.39 0.00 0.00 3.16
3084 7471 9.672086 TTAAATCGTGTCTTTTTCCTTGTATTG 57.328 29.630 0.00 0.00 0.00 1.90
3085 7472 6.877611 ATCGTGTCTTTTTCCTTGTATTGT 57.122 33.333 0.00 0.00 0.00 2.71
3086 7473 6.295039 TCGTGTCTTTTTCCTTGTATTGTC 57.705 37.500 0.00 0.00 0.00 3.18
3087 7474 6.053005 TCGTGTCTTTTTCCTTGTATTGTCT 58.947 36.000 0.00 0.00 0.00 3.41
3088 7475 6.540914 TCGTGTCTTTTTCCTTGTATTGTCTT 59.459 34.615 0.00 0.00 0.00 3.01
3089 7476 6.851330 CGTGTCTTTTTCCTTGTATTGTCTTC 59.149 38.462 0.00 0.00 0.00 2.87
3090 7477 7.139392 GTGTCTTTTTCCTTGTATTGTCTTCC 58.861 38.462 0.00 0.00 0.00 3.46
3091 7478 7.013369 GTGTCTTTTTCCTTGTATTGTCTTCCT 59.987 37.037 0.00 0.00 0.00 3.36
3092 7479 7.559897 TGTCTTTTTCCTTGTATTGTCTTCCTT 59.440 33.333 0.00 0.00 0.00 3.36
3093 7480 8.414003 GTCTTTTTCCTTGTATTGTCTTCCTTT 58.586 33.333 0.00 0.00 0.00 3.11
3094 7481 8.977412 TCTTTTTCCTTGTATTGTCTTCCTTTT 58.023 29.630 0.00 0.00 0.00 2.27
3095 7482 9.599866 CTTTTTCCTTGTATTGTCTTCCTTTTT 57.400 29.630 0.00 0.00 0.00 1.94
3096 7483 9.594478 TTTTTCCTTGTATTGTCTTCCTTTTTC 57.406 29.630 0.00 0.00 0.00 2.29
3097 7484 8.533569 TTTCCTTGTATTGTCTTCCTTTTTCT 57.466 30.769 0.00 0.00 0.00 2.52
3098 7485 7.745620 TCCTTGTATTGTCTTCCTTTTTCTC 57.254 36.000 0.00 0.00 0.00 2.87
3099 7486 6.426937 TCCTTGTATTGTCTTCCTTTTTCTCG 59.573 38.462 0.00 0.00 0.00 4.04
3100 7487 6.204882 CCTTGTATTGTCTTCCTTTTTCTCGT 59.795 38.462 0.00 0.00 0.00 4.18
3101 7488 6.539649 TGTATTGTCTTCCTTTTTCTCGTG 57.460 37.500 0.00 0.00 0.00 4.35
3102 7489 6.285224 TGTATTGTCTTCCTTTTTCTCGTGA 58.715 36.000 0.00 0.00 0.00 4.35
3103 7490 6.764085 TGTATTGTCTTCCTTTTTCTCGTGAA 59.236 34.615 0.00 0.00 0.00 3.18
3104 7491 5.734855 TTGTCTTCCTTTTTCTCGTGAAG 57.265 39.130 0.00 0.00 35.01 3.02
3105 7492 3.560068 TGTCTTCCTTTTTCTCGTGAAGC 59.440 43.478 0.00 0.00 33.99 3.86
3106 7493 3.560068 GTCTTCCTTTTTCTCGTGAAGCA 59.440 43.478 0.00 0.00 33.99 3.91
3107 7494 3.560068 TCTTCCTTTTTCTCGTGAAGCAC 59.440 43.478 0.00 0.00 33.99 4.40
3108 7495 2.912771 TCCTTTTTCTCGTGAAGCACA 58.087 42.857 0.00 0.00 33.40 4.57
3109 7496 2.612212 TCCTTTTTCTCGTGAAGCACAC 59.388 45.455 0.00 4.35 45.11 3.82
3177 7564 5.356190 CCTCTTTTCTTTATCTCATGCAGCA 59.644 40.000 0.00 0.00 0.00 4.41
3186 7573 1.078988 TCATGCAGCATCGCTCACA 60.079 52.632 4.38 0.00 36.40 3.58
3195 7582 2.959030 AGCATCGCTCACACCTAGAATA 59.041 45.455 0.00 0.00 30.62 1.75
3201 7588 5.730550 TCGCTCACACCTAGAATAAAACAT 58.269 37.500 0.00 0.00 0.00 2.71
3263 7652 6.030228 GGCTCATTGTTTATGCAGTTAACTC 58.970 40.000 4.77 1.77 34.06 3.01
3266 7655 5.180304 TCATTGTTTATGCAGTTAACTCGCA 59.820 36.000 24.85 24.85 40.50 5.10
3285 7674 2.843643 GCACACGTATGCAAATTTACCG 59.156 45.455 15.18 0.00 45.39 4.02
3295 7684 4.950050 TGCAAATTTACCGGATTTTGTGT 58.050 34.783 9.46 0.00 0.00 3.72
3296 7685 4.985409 TGCAAATTTACCGGATTTTGTGTC 59.015 37.500 9.46 1.19 0.00 3.67
3362 7889 6.780944 CATGCTCTATGTAAAAGAAAACGC 57.219 37.500 0.00 0.00 31.92 4.84
3363 7890 6.546395 CATGCTCTATGTAAAAGAAAACGCT 58.454 36.000 0.00 0.00 31.92 5.07
3364 7891 5.927030 TGCTCTATGTAAAAGAAAACGCTG 58.073 37.500 0.00 0.00 0.00 5.18
3373 7900 3.502191 AAGAAAACGCTGCAAAAGTGA 57.498 38.095 0.00 0.00 38.83 3.41
3381 7908 6.927933 AACGCTGCAAAAGTGATAAATAAC 57.072 33.333 0.00 0.00 38.83 1.89
3404 7931 5.418840 ACCAGTGAGAAAGTGTTTTGTCAAT 59.581 36.000 2.04 0.00 44.93 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 5.940192 TCGTGAGATGTAGTGCAATTTTT 57.060 34.783 0.00 0.00 33.31 1.94
86 87 5.940192 TTCGTGAGATGTAGTGCAATTTT 57.060 34.783 0.00 0.00 41.60 1.82
87 88 7.792374 ATATTCGTGAGATGTAGTGCAATTT 57.208 32.000 0.00 0.00 41.60 1.82
88 89 7.633621 CAATATTCGTGAGATGTAGTGCAATT 58.366 34.615 0.00 0.00 41.60 2.32
89 90 6.293081 GCAATATTCGTGAGATGTAGTGCAAT 60.293 38.462 0.00 0.00 44.56 3.56
90 91 5.006649 GCAATATTCGTGAGATGTAGTGCAA 59.993 40.000 0.00 0.00 44.56 4.08
91 92 4.507756 GCAATATTCGTGAGATGTAGTGCA 59.492 41.667 0.00 0.00 44.56 4.57
92 93 4.507756 TGCAATATTCGTGAGATGTAGTGC 59.492 41.667 0.00 0.00 44.98 4.40
93 94 6.399354 CGATGCAATATTCGTGAGATGTAGTG 60.399 42.308 0.00 0.00 41.60 2.74
94 95 5.631096 CGATGCAATATTCGTGAGATGTAGT 59.369 40.000 0.00 0.00 41.60 2.73
95 96 5.858581 TCGATGCAATATTCGTGAGATGTAG 59.141 40.000 7.27 0.00 41.60 2.74
96 97 5.629435 GTCGATGCAATATTCGTGAGATGTA 59.371 40.000 7.27 0.00 41.60 2.29
97 98 4.445718 GTCGATGCAATATTCGTGAGATGT 59.554 41.667 7.27 0.00 41.60 3.06
98 99 4.683320 AGTCGATGCAATATTCGTGAGATG 59.317 41.667 7.27 0.00 41.60 2.90
99 100 4.876125 AGTCGATGCAATATTCGTGAGAT 58.124 39.130 7.27 0.00 41.60 2.75
100 101 4.307443 AGTCGATGCAATATTCGTGAGA 57.693 40.909 7.27 0.00 36.74 3.27
101 102 5.395325 AAAGTCGATGCAATATTCGTGAG 57.605 39.130 7.27 0.00 36.74 3.51
102 103 5.794687 AAAAGTCGATGCAATATTCGTGA 57.205 34.783 7.27 0.00 36.74 4.35
126 127 9.689976 TGAATAGATCGAAAATTTTCTTGCAAA 57.310 25.926 24.53 9.42 35.07 3.68
128 129 9.507280 GATGAATAGATCGAAAATTTTCTTGCA 57.493 29.630 24.53 13.08 35.07 4.08
129 130 9.727627 AGATGAATAGATCGAAAATTTTCTTGC 57.272 29.630 24.53 14.67 35.07 4.01
149 150 8.817100 CGTTGTACTGCTATGATTAAAGATGAA 58.183 33.333 0.00 0.00 0.00 2.57
150 151 8.194769 TCGTTGTACTGCTATGATTAAAGATGA 58.805 33.333 0.00 0.00 0.00 2.92
151 152 8.352752 TCGTTGTACTGCTATGATTAAAGATG 57.647 34.615 0.00 0.00 0.00 2.90
152 153 8.942338 TTCGTTGTACTGCTATGATTAAAGAT 57.058 30.769 0.00 0.00 0.00 2.40
153 154 8.942338 ATTCGTTGTACTGCTATGATTAAAGA 57.058 30.769 0.00 0.00 0.00 2.52
155 156 9.037737 GGTATTCGTTGTACTGCTATGATTAAA 57.962 33.333 0.00 0.00 0.00 1.52
156 157 8.198778 TGGTATTCGTTGTACTGCTATGATTAA 58.801 33.333 0.00 0.00 0.00 1.40
157 158 7.718525 TGGTATTCGTTGTACTGCTATGATTA 58.281 34.615 0.00 0.00 0.00 1.75
158 159 6.578944 TGGTATTCGTTGTACTGCTATGATT 58.421 36.000 0.00 0.00 0.00 2.57
159 160 6.040504 TCTGGTATTCGTTGTACTGCTATGAT 59.959 38.462 0.00 0.00 0.00 2.45
160 161 5.358725 TCTGGTATTCGTTGTACTGCTATGA 59.641 40.000 0.00 0.00 0.00 2.15
161 162 5.588240 TCTGGTATTCGTTGTACTGCTATG 58.412 41.667 0.00 0.00 0.00 2.23
162 163 5.847111 TCTGGTATTCGTTGTACTGCTAT 57.153 39.130 0.00 0.00 0.00 2.97
163 164 5.648178 TTCTGGTATTCGTTGTACTGCTA 57.352 39.130 0.00 0.00 0.00 3.49
164 165 4.530710 TTCTGGTATTCGTTGTACTGCT 57.469 40.909 0.00 0.00 0.00 4.24
165 166 5.796350 ATTTCTGGTATTCGTTGTACTGC 57.204 39.130 0.00 0.00 0.00 4.40
190 191 8.816894 GGTCTATGGATCTGGATGTAATTTCTA 58.183 37.037 0.00 0.00 0.00 2.10
191 192 7.293299 TGGTCTATGGATCTGGATGTAATTTCT 59.707 37.037 0.00 0.00 0.00 2.52
192 193 7.389053 GTGGTCTATGGATCTGGATGTAATTTC 59.611 40.741 0.00 0.00 0.00 2.17
193 194 7.227156 GTGGTCTATGGATCTGGATGTAATTT 58.773 38.462 0.00 0.00 0.00 1.82
194 195 6.240002 GGTGGTCTATGGATCTGGATGTAATT 60.240 42.308 0.00 0.00 0.00 1.40
195 196 5.249393 GGTGGTCTATGGATCTGGATGTAAT 59.751 44.000 0.00 0.00 0.00 1.89
196 197 4.593206 GGTGGTCTATGGATCTGGATGTAA 59.407 45.833 0.00 0.00 0.00 2.41
197 198 4.140686 AGGTGGTCTATGGATCTGGATGTA 60.141 45.833 0.00 0.00 0.00 2.29
198 199 2.975489 GGTGGTCTATGGATCTGGATGT 59.025 50.000 0.00 0.00 0.00 3.06
199 200 3.246301 AGGTGGTCTATGGATCTGGATG 58.754 50.000 0.00 0.00 0.00 3.51
200 201 3.645053 AGGTGGTCTATGGATCTGGAT 57.355 47.619 0.00 0.00 0.00 3.41
201 202 3.755483 GCTAGGTGGTCTATGGATCTGGA 60.755 52.174 0.00 0.00 0.00 3.86
202 203 2.564947 GCTAGGTGGTCTATGGATCTGG 59.435 54.545 0.00 0.00 0.00 3.86
203 204 2.230025 CGCTAGGTGGTCTATGGATCTG 59.770 54.545 0.00 0.00 0.00 2.90
204 205 2.108425 TCGCTAGGTGGTCTATGGATCT 59.892 50.000 0.00 0.00 0.00 2.75
205 206 2.229302 GTCGCTAGGTGGTCTATGGATC 59.771 54.545 0.00 0.00 0.00 3.36
206 207 2.240279 GTCGCTAGGTGGTCTATGGAT 58.760 52.381 0.00 0.00 0.00 3.41
207 208 1.064240 TGTCGCTAGGTGGTCTATGGA 60.064 52.381 0.00 0.00 0.00 3.41
208 209 1.399714 TGTCGCTAGGTGGTCTATGG 58.600 55.000 0.00 0.00 0.00 2.74
209 210 2.427453 AGTTGTCGCTAGGTGGTCTATG 59.573 50.000 0.00 0.00 0.00 2.23
210 211 2.736347 AGTTGTCGCTAGGTGGTCTAT 58.264 47.619 0.00 0.00 0.00 1.98
211 212 2.211250 AGTTGTCGCTAGGTGGTCTA 57.789 50.000 0.00 0.00 0.00 2.59
212 213 1.817447 GTAGTTGTCGCTAGGTGGTCT 59.183 52.381 0.00 0.00 0.00 3.85
213 214 1.135170 GGTAGTTGTCGCTAGGTGGTC 60.135 57.143 0.00 0.00 0.00 4.02
214 215 0.893447 GGTAGTTGTCGCTAGGTGGT 59.107 55.000 0.00 0.00 0.00 4.16
215 216 0.892755 TGGTAGTTGTCGCTAGGTGG 59.107 55.000 0.00 0.00 0.00 4.61
216 217 1.736032 GCTGGTAGTTGTCGCTAGGTG 60.736 57.143 0.00 0.00 0.00 4.00
217 218 0.531200 GCTGGTAGTTGTCGCTAGGT 59.469 55.000 0.00 0.00 0.00 3.08
218 219 0.530744 TGCTGGTAGTTGTCGCTAGG 59.469 55.000 0.00 0.00 0.00 3.02
219 220 1.202582 AGTGCTGGTAGTTGTCGCTAG 59.797 52.381 0.00 0.00 0.00 3.42
220 221 1.067846 CAGTGCTGGTAGTTGTCGCTA 60.068 52.381 0.00 0.00 0.00 4.26
221 222 0.319900 CAGTGCTGGTAGTTGTCGCT 60.320 55.000 0.00 0.00 0.00 4.93
222 223 0.319555 TCAGTGCTGGTAGTTGTCGC 60.320 55.000 0.00 0.00 0.00 5.19
223 224 2.061773 CTTCAGTGCTGGTAGTTGTCG 58.938 52.381 0.00 0.00 0.00 4.35
224 225 1.801178 GCTTCAGTGCTGGTAGTTGTC 59.199 52.381 0.00 0.00 0.00 3.18
225 226 1.873903 CGCTTCAGTGCTGGTAGTTGT 60.874 52.381 0.00 0.00 0.00 3.32
226 227 0.792640 CGCTTCAGTGCTGGTAGTTG 59.207 55.000 0.00 0.00 0.00 3.16
227 228 0.679505 TCGCTTCAGTGCTGGTAGTT 59.320 50.000 0.00 0.00 0.00 2.24
228 229 0.244994 CTCGCTTCAGTGCTGGTAGT 59.755 55.000 0.00 0.00 0.00 2.73
229 230 1.080995 GCTCGCTTCAGTGCTGGTAG 61.081 60.000 0.00 0.00 0.00 3.18
230 231 1.079819 GCTCGCTTCAGTGCTGGTA 60.080 57.895 0.00 0.00 0.00 3.25
231 232 2.358003 GCTCGCTTCAGTGCTGGT 60.358 61.111 0.00 0.00 0.00 4.00
232 233 3.123620 GGCTCGCTTCAGTGCTGG 61.124 66.667 0.00 0.00 0.00 4.85
233 234 3.485431 CGGCTCGCTTCAGTGCTG 61.485 66.667 0.00 0.00 0.00 4.41
234 235 3.226429 TTCGGCTCGCTTCAGTGCT 62.226 57.895 0.00 0.00 0.00 4.40
235 236 2.734673 CTTCGGCTCGCTTCAGTGC 61.735 63.158 0.00 0.00 0.00 4.40
236 237 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
237 238 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
238 239 3.191539 GCCTTCGGCTCGCTTCAG 61.192 66.667 0.00 0.00 46.69 3.02
262 263 3.521529 GATGGAGGGGCGATGACGG 62.522 68.421 0.00 0.00 40.15 4.79
263 264 2.029666 GATGGAGGGGCGATGACG 59.970 66.667 0.00 0.00 42.93 4.35
264 265 2.029666 CGATGGAGGGGCGATGAC 59.970 66.667 0.00 0.00 0.00 3.06
265 266 3.928779 GCGATGGAGGGGCGATGA 61.929 66.667 0.00 0.00 0.00 2.92
266 267 4.996434 GGCGATGGAGGGGCGATG 62.996 72.222 0.00 0.00 0.00 3.84
283 284 2.030562 AAGTTGTGCCCGACTCCG 59.969 61.111 0.00 0.00 34.00 4.63
284 285 0.818040 AACAAGTTGTGCCCGACTCC 60.818 55.000 9.79 0.00 34.00 3.85
285 286 0.307760 CAACAAGTTGTGCCCGACTC 59.692 55.000 9.79 0.00 34.00 3.36
286 287 2.404083 CAACAAGTTGTGCCCGACT 58.596 52.632 9.79 0.00 36.86 4.18
295 296 5.236478 CCCAACTGTCTACTACAACAAGTTG 59.764 44.000 11.16 11.16 45.58 3.16
296 297 5.129815 TCCCAACTGTCTACTACAACAAGTT 59.870 40.000 0.00 0.00 37.74 2.66
297 298 4.652421 TCCCAACTGTCTACTACAACAAGT 59.348 41.667 0.00 0.00 37.74 3.16
298 299 5.209818 TCCCAACTGTCTACTACAACAAG 57.790 43.478 0.00 0.00 37.74 3.16
299 300 5.129815 ACTTCCCAACTGTCTACTACAACAA 59.870 40.000 0.00 0.00 37.74 2.83
300 301 4.652421 ACTTCCCAACTGTCTACTACAACA 59.348 41.667 0.00 0.00 37.74 3.33
301 302 5.211174 ACTTCCCAACTGTCTACTACAAC 57.789 43.478 0.00 0.00 37.74 3.32
302 303 4.022589 CGACTTCCCAACTGTCTACTACAA 60.023 45.833 0.00 0.00 37.74 2.41
303 304 3.504906 CGACTTCCCAACTGTCTACTACA 59.495 47.826 0.00 0.00 36.42 2.74
304 305 3.505293 ACGACTTCCCAACTGTCTACTAC 59.495 47.826 0.00 0.00 0.00 2.73
305 306 3.755378 GACGACTTCCCAACTGTCTACTA 59.245 47.826 0.00 0.00 0.00 1.82
306 307 2.557490 GACGACTTCCCAACTGTCTACT 59.443 50.000 0.00 0.00 0.00 2.57
307 308 2.667724 CGACGACTTCCCAACTGTCTAC 60.668 54.545 0.00 0.00 0.00 2.59
308 309 1.538512 CGACGACTTCCCAACTGTCTA 59.461 52.381 0.00 0.00 0.00 2.59
309 310 0.314302 CGACGACTTCCCAACTGTCT 59.686 55.000 0.00 0.00 0.00 3.41
310 311 0.031721 ACGACGACTTCCCAACTGTC 59.968 55.000 0.00 0.00 0.00 3.51
311 312 0.249322 CACGACGACTTCCCAACTGT 60.249 55.000 0.00 0.00 0.00 3.55
312 313 1.557443 GCACGACGACTTCCCAACTG 61.557 60.000 0.00 0.00 0.00 3.16
313 314 1.300697 GCACGACGACTTCCCAACT 60.301 57.895 0.00 0.00 0.00 3.16
314 315 0.038892 TAGCACGACGACTTCCCAAC 60.039 55.000 0.00 0.00 0.00 3.77
315 316 0.675083 TTAGCACGACGACTTCCCAA 59.325 50.000 0.00 0.00 0.00 4.12
316 317 0.242825 CTTAGCACGACGACTTCCCA 59.757 55.000 0.00 0.00 0.00 4.37
317 318 0.458025 CCTTAGCACGACGACTTCCC 60.458 60.000 0.00 0.00 0.00 3.97
318 319 1.077089 GCCTTAGCACGACGACTTCC 61.077 60.000 0.00 0.00 39.53 3.46
319 320 1.077089 GGCCTTAGCACGACGACTTC 61.077 60.000 0.00 0.00 42.56 3.01
320 321 1.080025 GGCCTTAGCACGACGACTT 60.080 57.895 0.00 0.00 42.56 3.01
321 322 2.572284 GGCCTTAGCACGACGACT 59.428 61.111 0.00 0.59 42.56 4.18
322 323 2.508663 GGGCCTTAGCACGACGAC 60.509 66.667 0.84 0.00 42.56 4.34
323 324 3.766691 GGGGCCTTAGCACGACGA 61.767 66.667 0.84 0.00 46.55 4.20
325 326 2.624437 CTACGGGGCCTTAGCACGAC 62.624 65.000 0.84 0.00 46.55 4.34
326 327 2.362760 TACGGGGCCTTAGCACGA 60.363 61.111 0.84 0.00 46.55 4.35
327 328 2.106332 CTACGGGGCCTTAGCACG 59.894 66.667 0.84 0.00 46.55 5.34
328 329 2.062177 TCCTACGGGGCCTTAGCAC 61.062 63.158 0.84 0.00 43.97 4.40
329 330 2.062177 GTCCTACGGGGCCTTAGCA 61.062 63.158 0.84 0.00 42.56 3.49
330 331 2.820261 GTCCTACGGGGCCTTAGC 59.180 66.667 0.84 0.00 38.76 3.09
338 339 4.814294 GTGCGCTGGTCCTACGGG 62.814 72.222 9.73 0.00 0.00 5.28
339 340 4.814294 GGTGCGCTGGTCCTACGG 62.814 72.222 9.73 0.00 0.00 4.02
340 341 3.989698 CTGGTGCGCTGGTCCTACG 62.990 68.421 9.73 0.30 0.00 3.51
341 342 2.125512 CTGGTGCGCTGGTCCTAC 60.126 66.667 9.73 0.00 0.00 3.18
342 343 1.911269 TTCTGGTGCGCTGGTCCTA 60.911 57.895 9.73 0.00 0.00 2.94
343 344 3.241530 TTCTGGTGCGCTGGTCCT 61.242 61.111 9.73 0.00 0.00 3.85
344 345 3.050275 GTTCTGGTGCGCTGGTCC 61.050 66.667 9.73 6.75 0.00 4.46
345 346 2.280797 TGTTCTGGTGCGCTGGTC 60.281 61.111 9.73 0.00 0.00 4.02
346 347 2.281070 CTGTTCTGGTGCGCTGGT 60.281 61.111 9.73 0.00 0.00 4.00
347 348 3.730761 GCTGTTCTGGTGCGCTGG 61.731 66.667 9.73 0.00 0.00 4.85
348 349 2.545596 TTGCTGTTCTGGTGCGCTG 61.546 57.895 9.73 0.00 0.00 5.18
349 350 2.203195 TTGCTGTTCTGGTGCGCT 60.203 55.556 9.73 0.00 0.00 5.92
350 351 2.050985 GTTGCTGTTCTGGTGCGC 60.051 61.111 0.00 0.00 0.00 6.09
351 352 2.639286 GGTTGCTGTTCTGGTGCG 59.361 61.111 0.00 0.00 0.00 5.34
352 353 2.639286 CGGTTGCTGTTCTGGTGC 59.361 61.111 0.00 0.00 0.00 5.01
353 354 2.639286 GCGGTTGCTGTTCTGGTG 59.361 61.111 0.00 0.00 38.39 4.17
369 370 4.947147 TTGGTGGGCGTGTGGAGC 62.947 66.667 0.00 0.00 0.00 4.70
370 371 2.978010 GTTGGTGGGCGTGTGGAG 60.978 66.667 0.00 0.00 0.00 3.86
371 372 4.920112 CGTTGGTGGGCGTGTGGA 62.920 66.667 0.00 0.00 0.00 4.02
372 373 4.920112 TCGTTGGTGGGCGTGTGG 62.920 66.667 0.00 0.00 0.00 4.17
373 374 2.668212 ATCGTTGGTGGGCGTGTG 60.668 61.111 0.00 0.00 0.00 3.82
374 375 2.668212 CATCGTTGGTGGGCGTGT 60.668 61.111 0.00 0.00 0.00 4.49
375 376 4.101790 GCATCGTTGGTGGGCGTG 62.102 66.667 0.00 0.00 0.00 5.34
376 377 2.852495 CTAGCATCGTTGGTGGGCGT 62.852 60.000 8.40 0.00 34.79 5.68
377 378 2.125310 TAGCATCGTTGGTGGGCG 60.125 61.111 8.40 0.00 34.79 6.13
378 379 1.090052 GTCTAGCATCGTTGGTGGGC 61.090 60.000 8.40 3.19 34.79 5.36
379 380 0.806102 CGTCTAGCATCGTTGGTGGG 60.806 60.000 8.40 2.07 34.79 4.61
380 381 2.665777 CGTCTAGCATCGTTGGTGG 58.334 57.895 8.40 5.61 34.79 4.61
392 393 1.944676 GTTCCGGCGATGCGTCTAG 60.945 63.158 9.30 0.00 0.00 2.43
393 394 2.103538 GTTCCGGCGATGCGTCTA 59.896 61.111 9.30 0.00 0.00 2.59
399 400 2.358193 TATGTCCCGTTCCGGCGATG 62.358 60.000 9.30 0.00 46.86 3.84
400 401 1.678598 TTATGTCCCGTTCCGGCGAT 61.679 55.000 9.30 0.00 46.86 4.58
401 402 2.349672 TTATGTCCCGTTCCGGCGA 61.350 57.895 9.30 0.00 46.86 5.54
402 403 2.169146 GTTATGTCCCGTTCCGGCG 61.169 63.158 0.00 0.00 46.86 6.46
403 404 1.816679 GGTTATGTCCCGTTCCGGC 60.817 63.158 0.00 0.00 46.86 6.13
405 406 1.338389 ACTTGGTTATGTCCCGTTCCG 60.338 52.381 0.00 0.00 0.00 4.30
406 407 2.027469 AGACTTGGTTATGTCCCGTTCC 60.027 50.000 0.00 0.00 32.86 3.62
407 408 3.329929 AGACTTGGTTATGTCCCGTTC 57.670 47.619 0.00 0.00 32.86 3.95
408 409 3.782656 AAGACTTGGTTATGTCCCGTT 57.217 42.857 0.00 0.00 32.86 4.44
409 410 3.369157 GCTAAGACTTGGTTATGTCCCGT 60.369 47.826 0.00 0.00 32.86 5.28
410 411 3.195661 GCTAAGACTTGGTTATGTCCCG 58.804 50.000 0.00 0.00 32.86 5.14
411 412 4.216411 TGCTAAGACTTGGTTATGTCCC 57.784 45.455 0.00 0.00 32.86 4.46
412 413 5.001232 TGTTGCTAAGACTTGGTTATGTCC 58.999 41.667 0.00 0.00 32.86 4.02
413 414 5.701290 AGTGTTGCTAAGACTTGGTTATGTC 59.299 40.000 0.00 0.00 29.58 3.06
414 415 5.470098 CAGTGTTGCTAAGACTTGGTTATGT 59.530 40.000 0.00 0.00 31.89 2.29
415 416 5.470098 ACAGTGTTGCTAAGACTTGGTTATG 59.530 40.000 0.00 0.00 31.89 1.90
416 417 5.621193 ACAGTGTTGCTAAGACTTGGTTAT 58.379 37.500 0.00 0.00 31.89 1.89
417 418 5.031066 ACAGTGTTGCTAAGACTTGGTTA 57.969 39.130 0.00 0.00 31.89 2.85
418 419 3.886123 ACAGTGTTGCTAAGACTTGGTT 58.114 40.909 0.00 0.00 31.89 3.67
419 420 3.560636 ACAGTGTTGCTAAGACTTGGT 57.439 42.857 0.00 0.00 31.89 3.67
420 421 3.251004 GGAACAGTGTTGCTAAGACTTGG 59.749 47.826 19.21 0.00 31.89 3.61
421 422 3.876914 TGGAACAGTGTTGCTAAGACTTG 59.123 43.478 25.31 0.00 31.89 3.16
473 474 4.351938 GTTTGTTTCGGGCGGCCC 62.352 66.667 28.61 28.61 41.09 5.80
474 475 4.693525 CGTTTGTTTCGGGCGGCC 62.694 66.667 20.04 20.04 0.00 6.13
478 479 1.065109 ACTTGCGTTTGTTTCGGGC 59.935 52.632 0.00 0.00 0.00 6.13
481 482 6.904954 AATATTACACTTGCGTTTGTTTCG 57.095 33.333 0.00 0.00 0.00 3.46
501 502 7.598278 TCGGGTTACAACGTAACTAGAAAATA 58.402 34.615 14.71 0.00 0.00 1.40
526 1744 9.927668 CTTTGGTTCAGGAAATAAACATGTAAT 57.072 29.630 0.00 0.00 0.00 1.89
532 1750 5.591067 ACGTCTTTGGTTCAGGAAATAAACA 59.409 36.000 0.00 0.00 0.00 2.83
559 1777 2.270874 ATCCCAAACTAGCAGCCGGG 62.271 60.000 2.18 0.00 34.81 5.73
575 1793 3.633525 TCACCATGTACCACGTAGTATCC 59.366 47.826 0.00 0.00 41.61 2.59
585 1803 2.691526 GTCGGAGTATCACCATGTACCA 59.308 50.000 0.00 0.00 36.25 3.25
821 2039 0.250424 TACTGGTCTGGTCGACACGA 60.250 55.000 18.91 9.89 44.68 4.35
826 2044 7.338703 GGTGATTATATATACTGGTCTGGTCGA 59.661 40.741 0.00 0.00 0.00 4.20
846 2064 1.507140 TTAGGGATCGGCTGGTGATT 58.493 50.000 0.00 0.00 0.00 2.57
858 2084 5.333566 TTTGGAGTTTGGACTTTAGGGAT 57.666 39.130 0.00 0.00 35.88 3.85
859 2085 4.799715 TTTGGAGTTTGGACTTTAGGGA 57.200 40.909 0.00 0.00 35.88 4.20
860 2086 4.038763 GGTTTTGGAGTTTGGACTTTAGGG 59.961 45.833 0.00 0.00 35.88 3.53
861 2087 4.647399 TGGTTTTGGAGTTTGGACTTTAGG 59.353 41.667 0.00 0.00 35.88 2.69
862 2088 5.126384 TGTGGTTTTGGAGTTTGGACTTTAG 59.874 40.000 0.00 0.00 35.88 1.85
863 2089 5.017490 TGTGGTTTTGGAGTTTGGACTTTA 58.983 37.500 0.00 0.00 35.88 1.85
864 2090 3.835395 TGTGGTTTTGGAGTTTGGACTTT 59.165 39.130 0.00 0.00 35.88 2.66
865 2091 3.436243 TGTGGTTTTGGAGTTTGGACTT 58.564 40.909 0.00 0.00 35.88 3.01
866 2092 3.094484 TGTGGTTTTGGAGTTTGGACT 57.906 42.857 0.00 0.00 39.32 3.85
867 2093 3.194755 ACTTGTGGTTTTGGAGTTTGGAC 59.805 43.478 0.00 0.00 0.00 4.02
868 2094 3.436243 ACTTGTGGTTTTGGAGTTTGGA 58.564 40.909 0.00 0.00 0.00 3.53
869 2095 3.733684 CGACTTGTGGTTTTGGAGTTTGG 60.734 47.826 0.00 0.00 0.00 3.28
870 2096 3.127895 TCGACTTGTGGTTTTGGAGTTTG 59.872 43.478 0.00 0.00 0.00 2.93
902 2128 1.153353 CGTACGAGGTGGCAATTTGT 58.847 50.000 10.44 0.00 0.00 2.83
903 2129 1.153353 ACGTACGAGGTGGCAATTTG 58.847 50.000 24.41 0.00 0.00 2.32
904 2130 2.340337 GTACGTACGAGGTGGCAATTT 58.660 47.619 24.41 0.00 0.00 1.82
905 2131 2.000429 GTACGTACGAGGTGGCAATT 58.000 50.000 24.41 0.00 0.00 2.32
906 2132 3.727419 GTACGTACGAGGTGGCAAT 57.273 52.632 24.41 0.00 0.00 3.56
917 2143 4.270178 AGCTATTCTGTCACGTACGTAC 57.730 45.455 22.34 18.49 0.00 3.67
918 2144 4.952262 AAGCTATTCTGTCACGTACGTA 57.048 40.909 22.34 4.43 0.00 3.57
919 2145 3.844577 AAGCTATTCTGTCACGTACGT 57.155 42.857 16.72 16.72 0.00 3.57
920 2146 3.237660 CGAAAGCTATTCTGTCACGTACG 59.762 47.826 15.01 15.01 0.00 3.67
921 2147 4.409570 TCGAAAGCTATTCTGTCACGTAC 58.590 43.478 0.00 0.00 0.00 3.67
922 2148 4.690184 TCGAAAGCTATTCTGTCACGTA 57.310 40.909 0.00 0.00 0.00 3.57
923 2149 3.570926 TCGAAAGCTATTCTGTCACGT 57.429 42.857 0.00 0.00 0.00 4.49
924 2150 3.178618 CGATCGAAAGCTATTCTGTCACG 59.821 47.826 10.26 0.00 0.00 4.35
925 2151 4.352039 TCGATCGAAAGCTATTCTGTCAC 58.648 43.478 16.99 0.00 0.00 3.67
926 2152 4.602006 CTCGATCGAAAGCTATTCTGTCA 58.398 43.478 19.92 0.00 0.00 3.58
927 2153 3.423867 GCTCGATCGAAAGCTATTCTGTC 59.576 47.826 19.92 0.00 35.60 3.51
928 2154 3.376540 GCTCGATCGAAAGCTATTCTGT 58.623 45.455 19.92 0.00 35.60 3.41
929 2155 2.728839 GGCTCGATCGAAAGCTATTCTG 59.271 50.000 23.44 8.84 38.58 3.02
930 2156 2.625790 AGGCTCGATCGAAAGCTATTCT 59.374 45.455 23.44 12.59 38.58 2.40
931 2157 2.983803 GAGGCTCGATCGAAAGCTATTC 59.016 50.000 23.44 16.33 38.58 1.75
932 2158 2.605823 CGAGGCTCGATCGAAAGCTATT 60.606 50.000 32.07 12.84 43.74 1.73
933 2159 1.068885 CGAGGCTCGATCGAAAGCTAT 60.069 52.381 32.07 15.14 43.74 2.97
934 2160 0.308068 CGAGGCTCGATCGAAAGCTA 59.692 55.000 32.07 0.93 43.74 3.32
935 2161 1.064946 CGAGGCTCGATCGAAAGCT 59.935 57.895 32.07 12.88 43.74 3.74
936 2162 1.064296 TCGAGGCTCGATCGAAAGC 59.936 57.895 33.80 18.97 44.82 3.51
953 2179 1.136984 CACGGCAGTACGAGGACTC 59.863 63.158 0.00 0.00 37.61 3.36
954 2180 1.303074 TCACGGCAGTACGAGGACT 60.303 57.895 0.00 0.00 37.61 3.85
955 2181 1.154073 GTCACGGCAGTACGAGGAC 60.154 63.158 0.00 0.00 37.61 3.85
956 2182 2.683859 CGTCACGGCAGTACGAGGA 61.684 63.158 11.36 0.00 38.89 3.71
957 2183 2.202440 CGTCACGGCAGTACGAGG 60.202 66.667 11.36 0.00 38.89 4.63
958 2184 1.511464 GTCGTCACGGCAGTACGAG 60.511 63.158 16.86 0.00 45.35 4.18
959 2185 2.557805 GTCGTCACGGCAGTACGA 59.442 61.111 14.04 14.04 42.83 3.43
960 2186 1.638388 TAGGTCGTCACGGCAGTACG 61.638 60.000 3.20 10.82 37.96 3.67
961 2187 0.523072 TTAGGTCGTCACGGCAGTAC 59.477 55.000 3.20 0.00 30.88 2.73
962 2188 0.806868 CTTAGGTCGTCACGGCAGTA 59.193 55.000 3.20 0.00 30.88 2.74
963 2189 1.585006 CTTAGGTCGTCACGGCAGT 59.415 57.895 3.20 0.00 30.88 4.40
964 2190 1.805945 GCTTAGGTCGTCACGGCAG 60.806 63.158 3.20 0.00 30.88 4.85
965 2191 2.260434 GCTTAGGTCGTCACGGCA 59.740 61.111 3.20 0.00 30.88 5.69
966 2192 2.508663 GGCTTAGGTCGTCACGGC 60.509 66.667 0.00 0.00 0.00 5.68
967 2193 2.202570 CGGCTTAGGTCGTCACGG 60.203 66.667 0.00 0.00 35.65 4.94
968 2194 1.226323 CTCGGCTTAGGTCGTCACG 60.226 63.158 0.00 0.00 41.76 4.35
969 2195 0.456312 CACTCGGCTTAGGTCGTCAC 60.456 60.000 0.00 0.00 41.76 3.67
970 2196 1.880894 CACTCGGCTTAGGTCGTCA 59.119 57.895 0.00 0.00 41.76 4.35
971 2197 1.516603 GCACTCGGCTTAGGTCGTC 60.517 63.158 0.00 0.00 41.76 4.20
972 2198 2.572284 GCACTCGGCTTAGGTCGT 59.428 61.111 0.00 0.00 41.76 4.34
973 2199 2.202756 GGCACTCGGCTTAGGTCG 60.203 66.667 0.00 0.00 44.01 4.79
974 2200 2.202756 CGGCACTCGGCTTAGGTC 60.203 66.667 0.00 0.00 44.01 3.85
1033 2259 1.194781 ATGACGAGGAGCACCAAGGT 61.195 55.000 2.07 0.00 38.94 3.50
1407 2639 1.001974 TCTGGCAACACGTCATTAGCT 59.998 47.619 0.00 0.00 46.17 3.32
1410 2642 2.611971 GGACTCTGGCAACACGTCATTA 60.612 50.000 0.00 0.00 46.17 1.90
1420 2652 2.741092 GTCCACGGACTCTGGCAA 59.259 61.111 9.04 0.00 41.57 4.52
1462 2694 3.056328 GCCCTGGTTCTTGACGGC 61.056 66.667 0.00 0.00 0.00 5.68
1590 2822 2.395360 GCTGTTATGCCCGTTGCGA 61.395 57.895 0.00 0.00 45.60 5.10
1602 2834 2.666862 CCGTTGCACCCGCTGTTA 60.667 61.111 0.00 0.00 39.64 2.41
1680 2912 1.683365 GGCGGTGTAGGGGTAGTCA 60.683 63.158 0.00 0.00 0.00 3.41
1779 3011 0.179065 CCTTCATCAGCGATGCCTCA 60.179 55.000 11.98 0.00 39.63 3.86
1785 3017 1.522355 CACGGCCTTCATCAGCGAT 60.522 57.895 0.00 0.00 0.00 4.58
1869 3109 4.003788 CACCGGCCCGTGAAGACT 62.004 66.667 18.24 0.00 35.68 3.24
1943 3188 1.889530 GAGCCAGTAGTCCTTGCCGT 61.890 60.000 0.00 0.00 32.26 5.68
2001 3246 1.293498 GCGCTCCATCCGGATGTAT 59.707 57.895 36.09 6.58 41.79 2.29
2114 3371 1.066587 CGATCGCACTTCTCCTCCC 59.933 63.158 0.26 0.00 0.00 4.30
2274 3531 1.377366 TTCGTTTCCCAGCGTTGCAA 61.377 50.000 0.00 0.00 0.00 4.08
2299 3556 0.402121 GGACTTCCCTTGCTCTTGGT 59.598 55.000 0.00 0.00 0.00 3.67
2364 3621 2.574955 AAGCTCTGAGACCGCGGTT 61.575 57.895 34.65 21.99 0.00 4.44
2403 3660 9.578439 CCTGTATATATAACTAAAACGGCCTAC 57.422 37.037 0.00 0.00 0.00 3.18
2449 3706 7.335673 TGCTACATTATCAGGACAATCGAAAAA 59.664 33.333 0.00 0.00 0.00 1.94
2450 3707 6.821160 TGCTACATTATCAGGACAATCGAAAA 59.179 34.615 0.00 0.00 0.00 2.29
2451 3708 6.345298 TGCTACATTATCAGGACAATCGAAA 58.655 36.000 0.00 0.00 0.00 3.46
2485 3742 2.237392 ACAATGACTCCAGCTAGTTCCC 59.763 50.000 0.00 0.00 0.00 3.97
2486 3743 3.618690 ACAATGACTCCAGCTAGTTCC 57.381 47.619 0.00 0.00 0.00 3.62
2487 3744 5.073311 TGTACAATGACTCCAGCTAGTTC 57.927 43.478 0.00 0.00 0.00 3.01
2488 3745 5.683876 ATGTACAATGACTCCAGCTAGTT 57.316 39.130 0.00 0.00 0.00 2.24
2489 3746 5.656859 TGTATGTACAATGACTCCAGCTAGT 59.343 40.000 0.00 0.00 32.40 2.57
2490 3747 6.149129 TGTATGTACAATGACTCCAGCTAG 57.851 41.667 0.00 0.00 32.40 3.42
2491 3748 6.731292 ATGTATGTACAATGACTCCAGCTA 57.269 37.500 0.00 0.00 39.99 3.32
2492 3749 5.620738 ATGTATGTACAATGACTCCAGCT 57.379 39.130 0.00 0.00 39.99 4.24
2493 3750 6.280643 TGTATGTATGTACAATGACTCCAGC 58.719 40.000 0.00 0.00 39.99 4.85
2580 3846 8.777413 CATATGTCAACCGATAGATCAACAAAT 58.223 33.333 0.00 0.00 39.76 2.32
2601 3867 7.066163 TCACTTGAAAACTAGGTCATGCATATG 59.934 37.037 0.00 0.00 35.57 1.78
2641 3907 4.393062 ACAACTGTGGATCGAATTAGCAAG 59.607 41.667 0.00 0.00 0.00 4.01
2642 3908 4.323417 ACAACTGTGGATCGAATTAGCAA 58.677 39.130 0.00 0.00 0.00 3.91
2643 3909 3.937814 ACAACTGTGGATCGAATTAGCA 58.062 40.909 0.00 0.00 0.00 3.49
2644 3910 4.946784 AACAACTGTGGATCGAATTAGC 57.053 40.909 0.00 0.00 0.00 3.09
2645 3911 6.480524 TGAAACAACTGTGGATCGAATTAG 57.519 37.500 0.00 0.00 0.00 1.73
2646 3912 6.869315 TTGAAACAACTGTGGATCGAATTA 57.131 33.333 0.00 0.00 0.00 1.40
2647 3913 5.766150 TTGAAACAACTGTGGATCGAATT 57.234 34.783 0.00 0.00 0.00 2.17
2648 3914 5.766150 TTTGAAACAACTGTGGATCGAAT 57.234 34.783 0.00 0.00 0.00 3.34
2649 3915 5.766150 ATTTGAAACAACTGTGGATCGAA 57.234 34.783 0.00 0.00 0.00 3.71
2650 3916 5.766150 AATTTGAAACAACTGTGGATCGA 57.234 34.783 0.00 0.00 0.00 3.59
2651 3917 6.826893 AAAATTTGAAACAACTGTGGATCG 57.173 33.333 0.00 0.00 0.00 3.69
2652 3918 8.141268 TCCTAAAATTTGAAACAACTGTGGATC 58.859 33.333 0.00 0.00 0.00 3.36
2653 3919 8.017418 TCCTAAAATTTGAAACAACTGTGGAT 57.983 30.769 0.00 0.00 0.00 3.41
2654 3920 7.411486 TCCTAAAATTTGAAACAACTGTGGA 57.589 32.000 0.00 0.00 0.00 4.02
2655 3921 7.307337 GCATCCTAAAATTTGAAACAACTGTGG 60.307 37.037 0.00 0.00 0.00 4.17
2656 3922 7.439056 AGCATCCTAAAATTTGAAACAACTGTG 59.561 33.333 0.00 0.00 0.00 3.66
2657 3923 7.500141 AGCATCCTAAAATTTGAAACAACTGT 58.500 30.769 0.00 0.00 0.00 3.55
2658 3924 7.951530 AGCATCCTAAAATTTGAAACAACTG 57.048 32.000 0.00 0.00 0.00 3.16
2659 3925 7.442062 CCAAGCATCCTAAAATTTGAAACAACT 59.558 33.333 0.00 0.00 0.00 3.16
2671 3937 4.263905 ACTGTGATCCCAAGCATCCTAAAA 60.264 41.667 0.00 0.00 0.00 1.52
2675 3941 1.293062 ACTGTGATCCCAAGCATCCT 58.707 50.000 0.00 0.00 0.00 3.24
2745 4011 2.604614 GGGCGTTTGTGCTAGTTTCTTG 60.605 50.000 0.00 0.00 34.52 3.02
2758 4024 0.039978 TTACAATGCACGGGCGTTTG 60.040 50.000 16.00 18.39 46.90 2.93
2762 4028 2.097538 CGTTACAATGCACGGGCG 59.902 61.111 4.58 0.00 45.35 6.13
2774 4040 4.147479 CACGCCAATTTTCTTTTCCGTTAC 59.853 41.667 0.00 0.00 0.00 2.50
2801 4067 0.238817 TACGGCGGACAATTTTGTGC 59.761 50.000 13.24 2.65 44.76 4.57
2818 4084 2.268298 CTGATGCCGTTGTACCACTAC 58.732 52.381 0.00 0.00 0.00 2.73
2846 4112 0.176910 TGTTTGTCGCTGTCAGGTGA 59.823 50.000 1.14 0.00 0.00 4.02
2850 4116 0.583438 CACCTGTTTGTCGCTGTCAG 59.417 55.000 0.00 0.00 0.00 3.51
2868 4134 5.361427 TCTTCTTCAAAATCACGGTGTACA 58.639 37.500 8.17 0.00 0.00 2.90
2899 7285 5.670792 AGTGTTCCTTATCATCCGTGTTA 57.329 39.130 0.00 0.00 0.00 2.41
2905 7292 8.964476 TTATGAAGAAGTGTTCCTTATCATCC 57.036 34.615 0.00 0.00 39.11 3.51
2989 7376 8.386264 AGGAATACCCGATTAAATGAGATTGAT 58.614 33.333 0.00 0.00 40.87 2.57
3044 7431 6.659824 ACACGATTTAAATAGGATTCTGGGT 58.340 36.000 12.20 0.00 0.00 4.51
3051 7438 9.462606 AGGAAAAAGACACGATTTAAATAGGAT 57.537 29.630 12.20 0.72 0.00 3.24
3052 7439 8.857694 AGGAAAAAGACACGATTTAAATAGGA 57.142 30.769 12.20 0.00 0.00 2.94
3054 7441 9.893305 ACAAGGAAAAAGACACGATTTAAATAG 57.107 29.630 0.00 3.58 0.00 1.73
3058 7445 9.672086 CAATACAAGGAAAAAGACACGATTTAA 57.328 29.630 0.00 0.00 0.00 1.52
3059 7446 8.842280 ACAATACAAGGAAAAAGACACGATTTA 58.158 29.630 0.00 0.00 0.00 1.40
3060 7447 7.712797 ACAATACAAGGAAAAAGACACGATTT 58.287 30.769 0.00 0.00 0.00 2.17
3061 7448 7.228706 AGACAATACAAGGAAAAAGACACGATT 59.771 33.333 0.00 0.00 0.00 3.34
3062 7449 6.710744 AGACAATACAAGGAAAAAGACACGAT 59.289 34.615 0.00 0.00 0.00 3.73
3063 7450 6.053005 AGACAATACAAGGAAAAAGACACGA 58.947 36.000 0.00 0.00 0.00 4.35
3064 7451 6.300354 AGACAATACAAGGAAAAAGACACG 57.700 37.500 0.00 0.00 0.00 4.49
3065 7452 7.013369 AGGAAGACAATACAAGGAAAAAGACAC 59.987 37.037 0.00 0.00 0.00 3.67
3066 7453 7.060421 AGGAAGACAATACAAGGAAAAAGACA 58.940 34.615 0.00 0.00 0.00 3.41
3067 7454 7.511959 AGGAAGACAATACAAGGAAAAAGAC 57.488 36.000 0.00 0.00 0.00 3.01
3068 7455 8.533569 AAAGGAAGACAATACAAGGAAAAAGA 57.466 30.769 0.00 0.00 0.00 2.52
3069 7456 9.599866 AAAAAGGAAGACAATACAAGGAAAAAG 57.400 29.630 0.00 0.00 0.00 2.27
3070 7457 9.594478 GAAAAAGGAAGACAATACAAGGAAAAA 57.406 29.630 0.00 0.00 0.00 1.94
3071 7458 8.977412 AGAAAAAGGAAGACAATACAAGGAAAA 58.023 29.630 0.00 0.00 0.00 2.29
3072 7459 8.533569 AGAAAAAGGAAGACAATACAAGGAAA 57.466 30.769 0.00 0.00 0.00 3.13
3073 7460 7.041372 CGAGAAAAAGGAAGACAATACAAGGAA 60.041 37.037 0.00 0.00 0.00 3.36
3074 7461 6.426937 CGAGAAAAAGGAAGACAATACAAGGA 59.573 38.462 0.00 0.00 0.00 3.36
3075 7462 6.204882 ACGAGAAAAAGGAAGACAATACAAGG 59.795 38.462 0.00 0.00 0.00 3.61
3076 7463 7.042051 TCACGAGAAAAAGGAAGACAATACAAG 60.042 37.037 0.00 0.00 0.00 3.16
3077 7464 6.764085 TCACGAGAAAAAGGAAGACAATACAA 59.236 34.615 0.00 0.00 0.00 2.41
3078 7465 6.285224 TCACGAGAAAAAGGAAGACAATACA 58.715 36.000 0.00 0.00 0.00 2.29
3079 7466 6.780706 TCACGAGAAAAAGGAAGACAATAC 57.219 37.500 0.00 0.00 0.00 1.89
3080 7467 6.073222 GCTTCACGAGAAAAAGGAAGACAATA 60.073 38.462 0.00 0.00 37.70 1.90
3081 7468 5.278022 GCTTCACGAGAAAAAGGAAGACAAT 60.278 40.000 0.00 0.00 37.70 2.71
3082 7469 4.035208 GCTTCACGAGAAAAAGGAAGACAA 59.965 41.667 0.00 0.00 37.70 3.18
3083 7470 3.560068 GCTTCACGAGAAAAAGGAAGACA 59.440 43.478 0.00 0.00 37.70 3.41
3084 7471 3.560068 TGCTTCACGAGAAAAAGGAAGAC 59.440 43.478 0.00 0.00 37.70 3.01
3085 7472 3.560068 GTGCTTCACGAGAAAAAGGAAGA 59.440 43.478 0.00 0.00 37.70 2.87
3086 7473 3.312421 TGTGCTTCACGAGAAAAAGGAAG 59.688 43.478 0.00 0.00 37.14 3.46
3087 7474 3.064820 GTGTGCTTCACGAGAAAAAGGAA 59.935 43.478 0.00 0.00 37.14 3.36
3088 7475 2.612212 GTGTGCTTCACGAGAAAAAGGA 59.388 45.455 0.00 0.00 37.14 3.36
3089 7476 2.987046 GTGTGCTTCACGAGAAAAAGG 58.013 47.619 0.00 0.00 37.14 3.11
3099 7486 3.665745 AAATGGGATTGTGTGCTTCAC 57.334 42.857 5.83 5.83 46.31 3.18
3100 7487 5.999205 ATTAAATGGGATTGTGTGCTTCA 57.001 34.783 0.00 0.00 0.00 3.02
3101 7488 9.683069 CTATAATTAAATGGGATTGTGTGCTTC 57.317 33.333 0.00 0.00 0.00 3.86
3102 7489 9.200817 ACTATAATTAAATGGGATTGTGTGCTT 57.799 29.630 0.00 0.00 0.00 3.91
3103 7490 8.766994 ACTATAATTAAATGGGATTGTGTGCT 57.233 30.769 0.00 0.00 0.00 4.40
3104 7491 8.629158 TGACTATAATTAAATGGGATTGTGTGC 58.371 33.333 0.00 0.00 0.00 4.57
3107 7494 9.965824 GGTTGACTATAATTAAATGGGATTGTG 57.034 33.333 0.00 0.00 0.00 3.33
3108 7495 9.707957 TGGTTGACTATAATTAAATGGGATTGT 57.292 29.630 0.00 0.00 0.00 2.71
3177 7564 5.730550 TGTTTTATTCTAGGTGTGAGCGAT 58.269 37.500 0.00 0.00 0.00 4.58
3195 7582 9.936759 AAAACGGTAAAATATGGATCATGTTTT 57.063 25.926 15.72 15.72 43.66 2.43
3266 7655 3.336468 TCCGGTAAATTTGCATACGTGT 58.664 40.909 8.59 0.00 0.00 4.49
3285 7674 5.696270 GTCCCTTCATTTTGACACAAAATCC 59.304 40.000 16.21 0.91 0.00 3.01
3295 7684 9.320295 ACCAATTAAATAGTCCCTTCATTTTGA 57.680 29.630 0.00 0.00 0.00 2.69
3340 7867 6.546395 CAGCGTTTTCTTTTACATAGAGCAT 58.454 36.000 0.00 0.00 0.00 3.79
3352 7879 3.843999 TCACTTTTGCAGCGTTTTCTTT 58.156 36.364 0.00 0.00 0.00 2.52
3355 7882 5.881637 TTTATCACTTTTGCAGCGTTTTC 57.118 34.783 0.00 0.00 0.00 2.29
3359 7886 5.048364 TGGTTATTTATCACTTTTGCAGCGT 60.048 36.000 0.00 0.00 0.00 5.07
3360 7887 5.398169 TGGTTATTTATCACTTTTGCAGCG 58.602 37.500 0.00 0.00 0.00 5.18
3361 7888 6.308766 CACTGGTTATTTATCACTTTTGCAGC 59.691 38.462 0.00 0.00 0.00 5.25
3362 7889 7.592938 TCACTGGTTATTTATCACTTTTGCAG 58.407 34.615 0.00 0.00 0.00 4.41
3363 7890 7.446931 TCTCACTGGTTATTTATCACTTTTGCA 59.553 33.333 0.00 0.00 0.00 4.08
3364 7891 7.816640 TCTCACTGGTTATTTATCACTTTTGC 58.183 34.615 0.00 0.00 0.00 3.68
3373 7900 9.965824 CAAAACACTTTCTCACTGGTTATTTAT 57.034 29.630 0.00 0.00 0.00 1.40
3381 7908 4.963276 TGACAAAACACTTTCTCACTGG 57.037 40.909 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.