Multiple sequence alignment - TraesCS2B01G576300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G576300 chr2B 100.000 4243 0 0 920 5162 765276335 765280577 0.000000e+00 7836.0
1 TraesCS2B01G576300 chr2B 100.000 576 0 0 1 576 765275416 765275991 0.000000e+00 1064.0
2 TraesCS2B01G576300 chr2B 81.081 703 93 25 923 1615 765212519 765213191 4.580000e-145 525.0
3 TraesCS2B01G576300 chr2B 81.846 325 36 12 240 557 765212145 765212453 8.580000e-63 252.0
4 TraesCS2B01G576300 chr2D 88.723 2004 148 39 2101 4075 623326915 623328869 0.000000e+00 2377.0
5 TraesCS2B01G576300 chr2D 89.321 1105 48 21 956 2019 623325821 623326896 0.000000e+00 1323.0
6 TraesCS2B01G576300 chr2D 88.931 533 37 12 4068 4600 623328963 623329473 5.640000e-179 638.0
7 TraesCS2B01G576300 chr2D 90.417 480 26 9 36 506 623324729 623325197 9.500000e-172 614.0
8 TraesCS2B01G576300 chr2D 100.000 43 0 0 5033 5075 623331220 623331262 4.280000e-11 80.5
9 TraesCS2B01G576300 chr2D 96.875 32 1 0 4762 4793 623329606 623329637 3.000000e-03 54.7
10 TraesCS2B01G576300 chr2A 92.607 1312 67 15 2777 4078 754450359 754451650 0.000000e+00 1858.0
11 TraesCS2B01G576300 chr2A 85.802 1782 151 58 921 2664 754448652 754450369 0.000000e+00 1796.0
12 TraesCS2B01G576300 chr2A 85.650 669 55 16 1838 2501 78829637 78830269 0.000000e+00 665.0
13 TraesCS2B01G576300 chr2A 87.588 427 28 12 4068 4491 754451742 754452146 6.050000e-129 472.0
14 TraesCS2B01G576300 chr2A 95.181 83 3 1 494 576 754448495 754448576 4.190000e-26 130.0
15 TraesCS2B01G576300 chr1A 85.191 682 61 17 1838 2513 581395002 581394355 0.000000e+00 664.0
16 TraesCS2B01G576300 chr1A 84.751 682 64 17 1838 2513 417739307 417738660 0.000000e+00 647.0
17 TraesCS2B01G576300 chr1A 84.903 669 63 21 1838 2501 367478414 367479049 4.360000e-180 641.0
18 TraesCS2B01G576300 chr4A 85.180 668 63 18 1838 2501 196915550 196916185 0.000000e+00 652.0
19 TraesCS2B01G576300 chr4A 84.853 680 68 17 1838 2513 542668930 542668282 0.000000e+00 652.0
20 TraesCS2B01G576300 chr4A 84.683 679 70 17 1838 2513 611823201 611822554 0.000000e+00 647.0
21 TraesCS2B01G576300 chr4A 84.903 669 63 17 1838 2501 604245431 604246066 4.360000e-180 641.0
22 TraesCS2B01G576300 chr4A 84.969 652 58 18 1867 2513 377194582 377193966 4.390000e-175 625.0
23 TraesCS2B01G576300 chr5A 84.604 682 64 20 1838 2513 518200001 518199355 1.570000e-179 640.0
24 TraesCS2B01G576300 chr3A 84.581 681 66 16 1838 2513 701687869 701687223 1.570000e-179 640.0
25 TraesCS2B01G576300 chr7D 77.754 463 72 22 1040 1497 246373868 246374304 6.630000e-64 255.0
26 TraesCS2B01G576300 chr6D 100.000 29 0 0 1 29 11323077 11323105 3.000000e-03 54.7
27 TraesCS2B01G576300 chr6D 100.000 29 0 0 1 29 29193381 29193353 3.000000e-03 54.7
28 TraesCS2B01G576300 chr6D 100.000 29 0 0 1 29 81307124 81307152 3.000000e-03 54.7
29 TraesCS2B01G576300 chr6D 100.000 29 0 0 1 29 99567575 99567547 3.000000e-03 54.7
30 TraesCS2B01G576300 chr6B 92.308 39 2 1 2046 2084 158199989 158199952 3.000000e-03 54.7
31 TraesCS2B01G576300 chr1D 100.000 29 0 0 1 29 112891463 112891491 3.000000e-03 54.7
32 TraesCS2B01G576300 chr1D 100.000 29 0 0 1 29 142530685 142530713 3.000000e-03 54.7
33 TraesCS2B01G576300 chr1D 100.000 29 0 0 1 29 323232190 323232162 3.000000e-03 54.7
34 TraesCS2B01G576300 chr1D 100.000 29 0 0 1 29 377800744 377800716 3.000000e-03 54.7
35 TraesCS2B01G576300 chr1D 100.000 29 0 0 1 29 432334733 432334705 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G576300 chr2B 765275416 765280577 5161 False 4450.000000 7836 100.000000 1 5162 2 chr2B.!!$F2 5161
1 TraesCS2B01G576300 chr2B 765212145 765213191 1046 False 388.500000 525 81.463500 240 1615 2 chr2B.!!$F1 1375
2 TraesCS2B01G576300 chr2D 623324729 623331262 6533 False 847.866667 2377 92.377833 36 5075 6 chr2D.!!$F1 5039
3 TraesCS2B01G576300 chr2A 754448495 754452146 3651 False 1064.000000 1858 90.294500 494 4491 4 chr2A.!!$F2 3997
4 TraesCS2B01G576300 chr2A 78829637 78830269 632 False 665.000000 665 85.650000 1838 2501 1 chr2A.!!$F1 663
5 TraesCS2B01G576300 chr1A 581394355 581395002 647 True 664.000000 664 85.191000 1838 2513 1 chr1A.!!$R2 675
6 TraesCS2B01G576300 chr1A 417738660 417739307 647 True 647.000000 647 84.751000 1838 2513 1 chr1A.!!$R1 675
7 TraesCS2B01G576300 chr1A 367478414 367479049 635 False 641.000000 641 84.903000 1838 2501 1 chr1A.!!$F1 663
8 TraesCS2B01G576300 chr4A 196915550 196916185 635 False 652.000000 652 85.180000 1838 2501 1 chr4A.!!$F1 663
9 TraesCS2B01G576300 chr4A 542668282 542668930 648 True 652.000000 652 84.853000 1838 2513 1 chr4A.!!$R2 675
10 TraesCS2B01G576300 chr4A 611822554 611823201 647 True 647.000000 647 84.683000 1838 2513 1 chr4A.!!$R3 675
11 TraesCS2B01G576300 chr4A 604245431 604246066 635 False 641.000000 641 84.903000 1838 2501 1 chr4A.!!$F2 663
12 TraesCS2B01G576300 chr4A 377193966 377194582 616 True 625.000000 625 84.969000 1867 2513 1 chr4A.!!$R1 646
13 TraesCS2B01G576300 chr5A 518199355 518200001 646 True 640.000000 640 84.604000 1838 2513 1 chr5A.!!$R1 675
14 TraesCS2B01G576300 chr3A 701687223 701687869 646 True 640.000000 640 84.581000 1838 2513 1 chr3A.!!$R1 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 408 0.685097 GCCAACACACCAGAGTCCTA 59.315 55.0 0.00 0.00 0.00 2.94 F
1514 2080 0.251209 GGTGAGAAACAACCCCCTCC 60.251 60.0 0.00 0.00 0.00 4.30 F
1660 2258 0.684805 AGCCGTTGTCCTAGGGAGAG 60.685 60.0 9.46 0.00 29.39 3.20 F
3292 3944 0.035630 AGAAATCGCTGCAGAAGGCT 60.036 50.0 20.43 3.08 45.15 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1584 2150 0.317603 ATCCGAGATCGCCGTTAACG 60.318 55.0 20.99 20.99 38.18 3.18 R
2748 3396 0.534877 TGCAATCACACCGACTTGCT 60.535 50.0 7.52 0.00 43.33 3.91 R
3522 4175 1.053424 TCCAGTAGTCCTTGCCGTTT 58.947 50.0 0.00 0.00 0.00 3.60 R
4885 5756 0.182537 CGGTAATGGGGCCAAGATCA 59.817 55.0 4.39 0.00 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 5.120830 AGTTCTGTATCAGCAAATCACGAAC 59.879 40.000 0.00 0.00 0.00 3.95
135 141 4.399303 CCACTCCTCATGGACATAAAAACC 59.601 45.833 0.00 0.00 39.87 3.27
170 176 9.352784 ACCGTATTTGTCAAATCAAATTACATG 57.647 29.630 14.07 0.00 42.88 3.21
359 368 1.198094 TCTTGATCCAACGGCCCTGA 61.198 55.000 0.00 0.00 0.00 3.86
391 400 4.012895 GCGTCGCCAACACACCAG 62.013 66.667 5.75 0.00 0.00 4.00
397 407 1.451936 GCCAACACACCAGAGTCCT 59.548 57.895 0.00 0.00 0.00 3.85
398 408 0.685097 GCCAACACACCAGAGTCCTA 59.315 55.000 0.00 0.00 0.00 2.94
410 420 3.192422 CCAGAGTCCTATCATCCGATGAC 59.808 52.174 13.36 1.41 43.01 3.06
479 489 8.411683 AGAATCAGAATATTCCATCAGCAAAAC 58.588 33.333 11.92 0.00 36.68 2.43
488 501 5.314923 TCCATCAGCAAAACAAGATTAGC 57.685 39.130 0.00 0.00 0.00 3.09
490 503 5.419788 TCCATCAGCAAAACAAGATTAGCAT 59.580 36.000 0.00 0.00 0.00 3.79
492 505 7.122501 TCCATCAGCAAAACAAGATTAGCATTA 59.877 33.333 0.00 0.00 0.00 1.90
556 569 3.852421 AACCCCAACCCCAACCCC 61.852 66.667 0.00 0.00 0.00 4.95
559 572 2.287251 CCCAACCCCAACCCCAAA 59.713 61.111 0.00 0.00 0.00 3.28
983 1519 3.677648 CCGTCTCCCCACGTCGTT 61.678 66.667 0.00 0.00 38.14 3.85
984 1520 2.126580 CGTCTCCCCACGTCGTTC 60.127 66.667 0.00 0.00 34.95 3.95
985 1521 2.260743 GTCTCCCCACGTCGTTCC 59.739 66.667 0.00 0.00 0.00 3.62
986 1522 2.993264 TCTCCCCACGTCGTTCCC 60.993 66.667 0.00 0.00 0.00 3.97
987 1523 4.078516 CTCCCCACGTCGTTCCCC 62.079 72.222 0.00 0.00 0.00 4.81
1506 2072 0.313672 GCCAATGCGGTGAGAAACAA 59.686 50.000 0.00 0.00 36.97 2.83
1509 2075 0.958822 AATGCGGTGAGAAACAACCC 59.041 50.000 0.00 0.00 31.55 4.11
1510 2076 0.893727 ATGCGGTGAGAAACAACCCC 60.894 55.000 0.00 0.00 31.55 4.95
1511 2077 2.265904 GCGGTGAGAAACAACCCCC 61.266 63.158 0.00 0.00 31.55 5.40
1512 2078 1.454539 CGGTGAGAAACAACCCCCT 59.545 57.895 0.00 0.00 31.55 4.79
1513 2079 0.605589 CGGTGAGAAACAACCCCCTC 60.606 60.000 0.00 0.00 31.55 4.30
1514 2080 0.251209 GGTGAGAAACAACCCCCTCC 60.251 60.000 0.00 0.00 0.00 4.30
1526 2092 2.612251 CCCTCCTCCTCCTCCTCC 59.388 72.222 0.00 0.00 0.00 4.30
1529 2095 2.204624 TCCTCCTCCTCCTCCCCA 60.205 66.667 0.00 0.00 0.00 4.96
1535 2101 0.980231 CCTCCTCCTCCCCACTTGAG 60.980 65.000 0.00 0.00 0.00 3.02
1584 2150 5.510430 AGATTTAGATTTGTCCCCTGTTCC 58.490 41.667 0.00 0.00 0.00 3.62
1654 2252 1.148157 CGATGCAGCCGTTGTCCTAG 61.148 60.000 0.00 0.00 0.00 3.02
1657 2255 2.656069 GCAGCCGTTGTCCTAGGGA 61.656 63.158 9.46 0.00 0.00 4.20
1658 2256 1.517832 CAGCCGTTGTCCTAGGGAG 59.482 63.158 9.46 0.00 29.39 4.30
1659 2257 0.970937 CAGCCGTTGTCCTAGGGAGA 60.971 60.000 9.46 0.00 29.39 3.71
1660 2258 0.684805 AGCCGTTGTCCTAGGGAGAG 60.685 60.000 9.46 0.00 29.39 3.20
1769 2367 2.700773 GGACGGAAGCAATGGCCAC 61.701 63.158 8.16 0.00 42.56 5.01
1851 2449 1.266989 GCTGTGTGGTTTGGAAGTAGC 59.733 52.381 0.00 0.00 0.00 3.58
1929 2528 3.435566 TCGCAGTTCAGATTGTCGTATC 58.564 45.455 0.00 0.00 0.00 2.24
1955 2558 3.008240 CTGTCAGTCAAGCGCTGCG 62.008 63.158 19.17 19.17 34.21 5.18
1956 2559 2.734723 GTCAGTCAAGCGCTGCGA 60.735 61.111 28.07 8.46 34.21 5.10
1957 2560 2.097038 GTCAGTCAAGCGCTGCGAT 61.097 57.895 28.07 18.71 34.21 4.58
1958 2561 2.096442 TCAGTCAAGCGCTGCGATG 61.096 57.895 28.07 22.29 34.21 3.84
1959 2562 3.494336 AGTCAAGCGCTGCGATGC 61.494 61.111 28.07 17.46 0.00 3.91
2005 2608 8.000127 ACTTAAACCATCAACCAACTACCTAAA 59.000 33.333 0.00 0.00 0.00 1.85
2019 2622 7.558444 CCAACTACCTAAAGGCATTAACCATAA 59.442 37.037 0.00 0.00 39.32 1.90
2020 2623 9.131791 CAACTACCTAAAGGCATTAACCATAAT 57.868 33.333 0.00 0.00 39.32 1.28
2022 2625 9.788889 ACTACCTAAAGGCATTAACCATAATAC 57.211 33.333 0.00 0.00 39.32 1.89
2044 2648 9.649167 AATACTAGCTGACAACGTTTACTATTT 57.351 29.630 0.00 0.00 0.00 1.40
2084 2694 5.919141 CAGTACCACTAGCATATAACGAACC 59.081 44.000 0.00 0.00 0.00 3.62
2099 2712 2.744202 ACGAACCATGCAGATTGTTCTC 59.256 45.455 14.50 0.00 33.81 2.87
2118 2731 4.809193 TCTCTATGGTGATTAGGCTGTCT 58.191 43.478 0.00 0.00 0.00 3.41
2119 2732 5.211973 TCTCTATGGTGATTAGGCTGTCTT 58.788 41.667 0.00 0.00 0.00 3.01
2120 2733 6.373759 TCTCTATGGTGATTAGGCTGTCTTA 58.626 40.000 0.00 0.00 0.00 2.10
2191 2807 7.803189 AGAAGAAGCAAACAAACGTTATGTATG 59.197 33.333 0.00 0.00 0.00 2.39
2192 2808 6.966021 AGAAGCAAACAAACGTTATGTATGT 58.034 32.000 0.00 0.00 0.00 2.29
2193 2809 8.090250 AGAAGCAAACAAACGTTATGTATGTA 57.910 30.769 0.00 0.00 0.00 2.29
2232 2851 1.610522 CAAGGGCCACTTTCACTTGAG 59.389 52.381 6.18 0.00 40.60 3.02
2236 2858 1.000938 GGCCACTTTCACTTGAGCAAG 60.001 52.381 8.60 8.60 43.79 4.01
2313 2935 6.040729 CCATTATTGTTCTGATATGTGGCCAA 59.959 38.462 7.24 0.00 0.00 4.52
2314 2936 6.698008 TTATTGTTCTGATATGTGGCCAAG 57.302 37.500 7.24 0.00 0.00 3.61
2320 2942 5.643379 TCTGATATGTGGCCAAGTTTTTC 57.357 39.130 7.24 0.39 0.00 2.29
2419 3041 6.457392 CCAGTTGATCATCATAACTTGAACCG 60.457 42.308 6.55 0.00 38.03 4.44
2426 3052 3.061322 TCATAACTTGAACCGTCAACCG 58.939 45.455 0.00 0.00 38.88 4.44
2436 3062 1.066430 ACCGTCAACCGACTATGCAAT 60.066 47.619 0.00 0.00 40.23 3.56
2441 3067 3.438781 GTCAACCGACTATGCAATGGAAA 59.561 43.478 0.00 0.00 39.22 3.13
2443 3069 4.335315 TCAACCGACTATGCAATGGAAATC 59.665 41.667 0.00 0.00 0.00 2.17
2520 3159 3.963665 TGCTGTACAAATTGTTCTGCAC 58.036 40.909 24.73 10.20 43.48 4.57
2532 3171 1.064060 GTTCTGCACGGTGATTATGCC 59.936 52.381 13.29 0.00 38.63 4.40
2569 3211 3.243002 GGTTTGCTGCTCTGCATATTCTC 60.243 47.826 0.00 0.00 42.96 2.87
2609 3251 1.696884 GGCCATGGGGAAAAACAGAAA 59.303 47.619 15.13 0.00 35.59 2.52
2610 3252 2.105649 GGCCATGGGGAAAAACAGAAAA 59.894 45.455 15.13 0.00 35.59 2.29
2611 3253 3.434310 GGCCATGGGGAAAAACAGAAAAA 60.434 43.478 15.13 0.00 35.59 1.94
2647 3292 4.202090 GCTTTGGCAGGAAATTGATCTAGG 60.202 45.833 0.00 0.00 38.54 3.02
2654 3299 6.377146 GGCAGGAAATTGATCTAGGTAAAACA 59.623 38.462 0.00 0.00 0.00 2.83
2663 3308 9.739276 ATTGATCTAGGTAAAACAGTTTGATGA 57.261 29.630 0.00 0.00 0.00 2.92
2682 3330 1.273327 GATTTGGACCCTTTGCCTGTG 59.727 52.381 0.00 0.00 0.00 3.66
2683 3331 1.398958 TTTGGACCCTTTGCCTGTGC 61.399 55.000 0.00 0.00 38.26 4.57
2685 3333 2.116125 GACCCTTTGCCTGTGCCT 59.884 61.111 0.00 0.00 36.33 4.75
2722 3370 2.857186 TGAGTTAAGTGAGCATGGCA 57.143 45.000 0.00 0.00 0.00 4.92
2723 3371 3.138884 TGAGTTAAGTGAGCATGGCAA 57.861 42.857 0.00 0.00 0.00 4.52
2731 3379 3.424703 AGTGAGCATGGCAATTAACTGT 58.575 40.909 0.00 0.00 0.00 3.55
2734 3382 3.056678 TGAGCATGGCAATTAACTGTTGG 60.057 43.478 2.69 0.00 0.00 3.77
2735 3383 2.899256 AGCATGGCAATTAACTGTTGGT 59.101 40.909 2.69 0.00 0.00 3.67
2738 3386 4.630111 CATGGCAATTAACTGTTGGTGTT 58.370 39.130 2.69 0.00 0.00 3.32
2739 3387 5.777802 CATGGCAATTAACTGTTGGTGTTA 58.222 37.500 2.69 0.00 0.00 2.41
2740 3388 5.854010 TGGCAATTAACTGTTGGTGTTAA 57.146 34.783 2.69 0.00 41.94 2.01
2741 3389 5.593010 TGGCAATTAACTGTTGGTGTTAAC 58.407 37.500 2.69 0.00 40.98 2.01
2742 3390 5.127194 TGGCAATTAACTGTTGGTGTTAACA 59.873 36.000 3.59 3.59 40.98 2.41
2750 3398 4.893424 TGTTGGTGTTAACAGAAGAAGC 57.107 40.909 8.98 0.00 35.75 3.86
2755 3404 4.574828 TGGTGTTAACAGAAGAAGCAAGTC 59.425 41.667 8.98 0.00 0.00 3.01
2766 3415 0.593128 AAGCAAGTCGGTGTGATTGC 59.407 50.000 0.65 0.65 46.50 3.56
2769 3418 1.068333 GCAAGTCGGTGTGATTGCAAT 60.068 47.619 12.83 12.83 45.66 3.56
2797 3446 5.007136 GGCACTCTTAGATGACATAAGTTGC 59.993 44.000 13.42 13.42 38.37 4.17
2822 3471 6.935167 TCTATTACTGTTGACTGAAGCATCA 58.065 36.000 0.00 0.00 0.00 3.07
2826 3475 5.117355 ACTGTTGACTGAAGCATCATTTG 57.883 39.130 0.00 0.00 34.37 2.32
2869 3521 3.181497 ACTGATGCATCGTTTGTAATGGC 60.181 43.478 21.34 0.00 0.00 4.40
2903 3555 0.940991 GTTGCTGGGCTTTTTCTGCG 60.941 55.000 0.00 0.00 0.00 5.18
2904 3556 1.106351 TTGCTGGGCTTTTTCTGCGA 61.106 50.000 0.00 0.00 0.00 5.10
3089 3741 6.287589 ACTGAAGATGACTACCCTTACAAG 57.712 41.667 0.00 0.00 0.00 3.16
3092 3744 3.725634 AGATGACTACCCTTACAAGGCT 58.274 45.455 2.22 0.00 45.10 4.58
3134 3786 0.400213 TCAGGGTGGGTACTTGCTTG 59.600 55.000 0.00 0.00 0.00 4.01
3135 3787 0.400213 CAGGGTGGGTACTTGCTTGA 59.600 55.000 0.00 0.00 0.00 3.02
3136 3788 1.004745 CAGGGTGGGTACTTGCTTGAT 59.995 52.381 0.00 0.00 0.00 2.57
3137 3789 1.710809 AGGGTGGGTACTTGCTTGATT 59.289 47.619 0.00 0.00 0.00 2.57
3142 3794 2.557924 TGGGTACTTGCTTGATTGCTTG 59.442 45.455 0.00 0.00 0.00 4.01
3156 3808 5.933617 TGATTGCTTGCTTCATATAGTCCT 58.066 37.500 0.00 0.00 0.00 3.85
3200 3852 3.620374 GCTGATGTTCTGACTGGTACATG 59.380 47.826 0.00 0.00 38.20 3.21
3201 3853 3.599343 TGATGTTCTGACTGGTACATGC 58.401 45.455 0.00 0.00 38.20 4.06
3226 3878 7.115947 GCTATCATATCTTTGCAGAAAAATGCC 59.884 37.037 0.00 0.00 45.91 4.40
3235 3887 2.485302 GCAGAAAAATGCCAAGGTGGTT 60.485 45.455 0.00 0.00 40.46 3.67
3250 3902 2.099756 GGTGGTTAGCATTGATGGCTTC 59.900 50.000 0.00 0.00 42.62 3.86
3271 3923 4.253685 TCGAAGATGTCCCTGAAAATGAC 58.746 43.478 0.00 0.00 0.00 3.06
3292 3944 0.035630 AGAAATCGCTGCAGAAGGCT 60.036 50.000 20.43 3.08 45.15 4.58
3430 4083 0.107165 GTCTGGTGATAACAGGCCCC 60.107 60.000 0.00 0.00 34.59 5.80
3431 4084 1.227383 CTGGTGATAACAGGCCCCC 59.773 63.158 0.00 0.00 32.38 5.40
3513 4166 0.310854 GTGTGGTTGCTGTTGGCTAC 59.689 55.000 0.00 0.00 43.87 3.58
3522 4175 2.357760 GTTGGCTACGGCACCGAA 60.358 61.111 17.40 0.00 42.83 4.30
3897 4550 1.905512 GGACTACCCCGTCTGCAAT 59.094 57.895 0.00 0.00 34.38 3.56
3898 4551 0.462047 GGACTACCCCGTCTGCAATG 60.462 60.000 0.00 0.00 34.38 2.82
3912 4565 1.379044 CAATGTCAGGGCTGGGACC 60.379 63.158 0.00 0.00 33.09 4.46
3927 4580 1.448013 GACCTGCTCAGCGGTAACC 60.448 63.158 12.39 0.00 36.12 2.85
3952 4605 7.970614 CCACTTCTGCTTTCTTGGTTTATTATC 59.029 37.037 0.00 0.00 0.00 1.75
3953 4606 8.514594 CACTTCTGCTTTCTTGGTTTATTATCA 58.485 33.333 0.00 0.00 0.00 2.15
3954 4607 9.247861 ACTTCTGCTTTCTTGGTTTATTATCAT 57.752 29.630 0.00 0.00 0.00 2.45
3987 4643 5.808030 CAGCATTGCAACAATATTCACATCA 59.192 36.000 11.91 0.00 0.00 3.07
3993 4649 9.926158 ATTGCAACAATATTCACATCAGTTTTA 57.074 25.926 0.00 0.00 0.00 1.52
3996 4652 9.571810 GCAACAATATTCACATCAGTTTTATGA 57.428 29.630 0.00 0.00 0.00 2.15
4018 4680 6.533730 TGATTATGTCTTGGAAGTGTTCAGT 58.466 36.000 0.00 0.00 0.00 3.41
4021 4683 3.950397 TGTCTTGGAAGTGTTCAGTTGT 58.050 40.909 0.00 0.00 0.00 3.32
4033 4695 4.013728 TGTTCAGTTGTTGCAAGTTAGGT 58.986 39.130 0.00 0.00 0.00 3.08
4036 4698 4.385825 TCAGTTGTTGCAAGTTAGGTAGG 58.614 43.478 0.00 0.00 0.00 3.18
4041 4703 3.244422 TGTTGCAAGTTAGGTAGGTCTGG 60.244 47.826 0.00 0.00 0.00 3.86
4078 4740 3.446873 TGCATGACCAAACTGACTTTGTT 59.553 39.130 0.00 0.00 38.08 2.83
4079 4741 4.081752 TGCATGACCAAACTGACTTTGTTT 60.082 37.500 0.00 0.00 38.08 2.83
4081 4743 5.005682 GCATGACCAAACTGACTTTGTTTTC 59.994 40.000 0.00 0.00 38.08 2.29
4084 4746 5.072040 ACCAAACTGACTTTGTTTTCCTG 57.928 39.130 0.00 0.00 38.08 3.86
4085 4747 4.081697 ACCAAACTGACTTTGTTTTCCTGG 60.082 41.667 0.00 0.00 38.08 4.45
4086 4748 4.159506 CCAAACTGACTTTGTTTTCCTGGA 59.840 41.667 0.00 0.00 38.08 3.86
4155 4919 2.568090 CTGGCCATGCGAAACACC 59.432 61.111 5.51 0.00 0.00 4.16
4170 4934 3.440415 ACCGCATGAGCTCGTCGA 61.440 61.111 21.62 0.00 39.10 4.20
4193 4957 4.452733 AGCGGCGGTGTCTAAGGC 62.453 66.667 12.25 0.00 0.00 4.35
4196 4960 4.832608 GGCGGTGTCTAAGGCGGG 62.833 72.222 0.00 0.00 0.00 6.13
4211 4975 2.131709 CGGGGTAGAAGGATGCGGA 61.132 63.158 0.00 0.00 0.00 5.54
4265 5029 3.377798 ACAAGCCTTTGTGCAAAATTTGG 59.622 39.130 7.89 0.00 45.54 3.28
4266 5030 3.557228 AGCCTTTGTGCAAAATTTGGA 57.443 38.095 7.89 1.21 0.00 3.53
4267 5031 3.883669 AGCCTTTGTGCAAAATTTGGAA 58.116 36.364 7.89 0.00 30.97 3.53
4268 5032 3.878699 AGCCTTTGTGCAAAATTTGGAAG 59.121 39.130 7.89 0.00 30.97 3.46
4325 5091 7.478044 GCTTAGTATTACGATTCTAGCAGTACG 59.522 40.741 0.00 0.00 0.00 3.67
4349 5115 5.832060 GGCTCGCTTTATATATCCCCTACTA 59.168 44.000 0.00 0.00 0.00 1.82
4354 5120 8.776119 TCGCTTTATATATCCCCTACTACTACT 58.224 37.037 0.00 0.00 0.00 2.57
4365 5131 8.943594 TCCCCTACTACTACTACTACTACTAC 57.056 42.308 0.00 0.00 0.00 2.73
4366 5132 8.738592 TCCCCTACTACTACTACTACTACTACT 58.261 40.741 0.00 0.00 0.00 2.57
4393 5159 3.865745 GTGTTCATTGTACATAGCTCGCT 59.134 43.478 0.00 0.00 0.00 4.93
4406 5172 1.279271 AGCTCGCTCCCATTTGTACTT 59.721 47.619 0.00 0.00 0.00 2.24
4408 5174 2.009774 CTCGCTCCCATTTGTACTTGG 58.990 52.381 0.00 0.00 0.00 3.61
4409 5175 1.349688 TCGCTCCCATTTGTACTTGGT 59.650 47.619 0.00 0.00 0.00 3.67
4410 5176 1.468520 CGCTCCCATTTGTACTTGGTG 59.531 52.381 0.00 0.00 0.00 4.17
4455 5222 2.874701 AGCTAATTGGTGATCATCGTGC 59.125 45.455 0.00 0.00 0.00 5.34
4461 5228 1.066286 TGGTGATCATCGTGCACATGA 60.066 47.619 24.44 24.44 34.74 3.07
4476 5243 5.231357 GTGCACATGATGTTTGATGCTTATG 59.769 40.000 13.17 0.00 34.18 1.90
4513 5280 1.464687 CGGTTCGAGCTTTTGATGCTG 60.465 52.381 0.00 0.00 41.30 4.41
4516 5283 1.159285 TCGAGCTTTTGATGCTGTGG 58.841 50.000 0.00 0.00 41.30 4.17
4522 5289 2.804212 GCTTTTGATGCTGTGGTTTGCT 60.804 45.455 0.00 0.00 0.00 3.91
4529 5296 0.040958 GCTGTGGTTTGCTGTTCGAG 60.041 55.000 0.00 0.00 0.00 4.04
4540 5307 1.433534 CTGTTCGAGTTTCCTGGAGC 58.566 55.000 0.00 0.00 0.00 4.70
4543 5310 0.756294 TTCGAGTTTCCTGGAGCACA 59.244 50.000 9.92 0.00 0.00 4.57
4548 5315 1.980765 AGTTTCCTGGAGCACATCTGA 59.019 47.619 9.92 0.00 0.00 3.27
4556 5323 5.045651 TCCTGGAGCACATCTGATTTCTTTA 60.046 40.000 0.00 0.00 0.00 1.85
4567 5334 8.734386 ACATCTGATTTCTTTATGAACTGAACC 58.266 33.333 0.00 0.00 33.88 3.62
4568 5335 7.364522 TCTGATTTCTTTATGAACTGAACCG 57.635 36.000 0.00 0.00 33.88 4.44
4589 5356 9.472361 GAACCGTGAAGATTAATTAGCTATGTA 57.528 33.333 0.00 0.00 0.00 2.29
4606 5373 8.621532 AGCTATGTAGTTTGTTTCTGAAATCA 57.378 30.769 6.06 4.04 0.00 2.57
4607 5374 9.236006 AGCTATGTAGTTTGTTTCTGAAATCAT 57.764 29.630 6.06 5.96 0.00 2.45
4608 5375 9.846248 GCTATGTAGTTTGTTTCTGAAATCATT 57.154 29.630 6.06 0.00 0.00 2.57
4611 5378 8.231692 TGTAGTTTGTTTCTGAAATCATTGGA 57.768 30.769 6.06 0.00 0.00 3.53
4612 5379 8.859090 TGTAGTTTGTTTCTGAAATCATTGGAT 58.141 29.630 6.06 0.00 34.43 3.41
4613 5380 9.696917 GTAGTTTGTTTCTGAAATCATTGGATT 57.303 29.630 6.06 0.00 45.57 3.01
4614 5381 8.597662 AGTTTGTTTCTGAAATCATTGGATTG 57.402 30.769 6.06 0.00 42.87 2.67
4615 5382 7.172019 AGTTTGTTTCTGAAATCATTGGATTGC 59.828 33.333 6.06 0.00 42.87 3.56
4616 5383 5.481105 TGTTTCTGAAATCATTGGATTGCC 58.519 37.500 6.06 0.00 42.87 4.52
4617 5384 5.246656 TGTTTCTGAAATCATTGGATTGCCT 59.753 36.000 6.06 0.00 42.87 4.75
4618 5385 6.436847 TGTTTCTGAAATCATTGGATTGCCTA 59.563 34.615 6.06 0.00 42.87 3.93
4619 5386 6.704289 TTCTGAAATCATTGGATTGCCTAG 57.296 37.500 0.00 0.00 42.87 3.02
4620 5387 6.005066 TCTGAAATCATTGGATTGCCTAGA 57.995 37.500 0.00 0.00 42.87 2.43
4621 5388 6.425735 TCTGAAATCATTGGATTGCCTAGAA 58.574 36.000 0.00 0.00 42.87 2.10
4622 5389 7.064866 TCTGAAATCATTGGATTGCCTAGAAT 58.935 34.615 0.00 0.00 42.87 2.40
4623 5390 7.230108 TCTGAAATCATTGGATTGCCTAGAATC 59.770 37.037 0.00 0.00 42.87 2.52
4624 5391 6.834969 TGAAATCATTGGATTGCCTAGAATCA 59.165 34.615 6.52 0.00 42.87 2.57
4625 5392 6.645790 AATCATTGGATTGCCTAGAATCAC 57.354 37.500 6.52 0.00 42.10 3.06
4626 5393 5.114764 TCATTGGATTGCCTAGAATCACA 57.885 39.130 6.52 0.97 34.50 3.58
4627 5394 5.698104 TCATTGGATTGCCTAGAATCACAT 58.302 37.500 6.52 0.00 34.50 3.21
4628 5395 6.840527 TCATTGGATTGCCTAGAATCACATA 58.159 36.000 6.52 0.00 34.50 2.29
4629 5396 7.289310 TCATTGGATTGCCTAGAATCACATAA 58.711 34.615 6.52 0.00 34.50 1.90
4630 5397 7.946219 TCATTGGATTGCCTAGAATCACATAAT 59.054 33.333 6.52 0.00 34.50 1.28
4631 5398 7.750229 TTGGATTGCCTAGAATCACATAATC 57.250 36.000 6.52 0.00 34.50 1.75
4632 5399 7.083062 TGGATTGCCTAGAATCACATAATCT 57.917 36.000 6.52 0.00 34.50 2.40
4633 5400 8.206126 TGGATTGCCTAGAATCACATAATCTA 57.794 34.615 6.52 0.00 34.50 1.98
4634 5401 8.829746 TGGATTGCCTAGAATCACATAATCTAT 58.170 33.333 6.52 0.00 34.50 1.98
4635 5402 9.107177 GGATTGCCTAGAATCACATAATCTATG 57.893 37.037 6.52 0.00 41.88 2.23
4636 5403 7.912056 TTGCCTAGAATCACATAATCTATGC 57.088 36.000 0.00 0.00 39.79 3.14
4637 5404 6.101997 TGCCTAGAATCACATAATCTATGCG 58.898 40.000 0.00 0.00 39.00 4.73
4638 5405 6.102663 GCCTAGAATCACATAATCTATGCGT 58.897 40.000 0.00 0.00 39.79 5.24
4639 5406 6.591834 GCCTAGAATCACATAATCTATGCGTT 59.408 38.462 0.00 0.00 39.79 4.84
4640 5407 7.118390 GCCTAGAATCACATAATCTATGCGTTT 59.882 37.037 0.00 0.00 39.79 3.60
4641 5408 8.993121 CCTAGAATCACATAATCTATGCGTTTT 58.007 33.333 0.00 0.00 39.79 2.43
4675 5442 5.103290 TGTGAAGTTAAATTGAGCCGTTC 57.897 39.130 0.00 0.00 0.00 3.95
4690 5457 9.825972 ATTGAGCCGTTCATATAATAAATTTCG 57.174 29.630 0.00 0.00 35.27 3.46
4691 5458 8.373048 TGAGCCGTTCATATAATAAATTTCGT 57.627 30.769 0.00 0.00 0.00 3.85
4692 5459 8.279800 TGAGCCGTTCATATAATAAATTTCGTG 58.720 33.333 0.00 0.00 0.00 4.35
4693 5460 8.149973 AGCCGTTCATATAATAAATTTCGTGT 57.850 30.769 0.00 0.00 0.00 4.49
4695 5462 7.532884 GCCGTTCATATAATAAATTTCGTGTCC 59.467 37.037 0.00 0.00 0.00 4.02
4696 5463 8.770828 CCGTTCATATAATAAATTTCGTGTCCT 58.229 33.333 0.00 0.00 0.00 3.85
4698 5465 9.382244 GTTCATATAATAAATTTCGTGTCCTGC 57.618 33.333 0.00 0.00 0.00 4.85
4699 5466 8.669946 TCATATAATAAATTTCGTGTCCTGCA 57.330 30.769 0.00 0.00 0.00 4.41
4701 5468 8.559536 CATATAATAAATTTCGTGTCCTGCAGT 58.440 33.333 13.81 0.00 0.00 4.40
4702 5469 4.685169 ATAAATTTCGTGTCCTGCAGTG 57.315 40.909 13.81 4.33 0.00 3.66
4703 5470 1.238439 AATTTCGTGTCCTGCAGTGG 58.762 50.000 13.81 0.00 0.00 4.00
4704 5471 0.396435 ATTTCGTGTCCTGCAGTGGA 59.604 50.000 13.81 0.93 0.00 4.02
4707 5474 2.359230 GTGTCCTGCAGTGGAGGC 60.359 66.667 25.07 19.40 36.69 4.70
4708 5475 2.848679 TGTCCTGCAGTGGAGGCA 60.849 61.111 25.07 21.57 36.69 4.75
4717 5485 4.139786 CTGCAGTGGAGGCAAACATATAT 58.860 43.478 5.25 0.00 41.39 0.86
4728 5496 9.301153 GGAGGCAAACATATATTTTAGTTGTTG 57.699 33.333 0.00 0.00 31.34 3.33
4729 5497 8.702163 AGGCAAACATATATTTTAGTTGTTGC 57.298 30.769 0.00 0.00 31.34 4.17
4731 5499 9.097257 GGCAAACATATATTTTAGTTGTTGCAT 57.903 29.630 0.00 0.00 31.34 3.96
4740 5508 5.378292 TTTAGTTGTTGCATATTTGGCGA 57.622 34.783 0.00 0.00 0.00 5.54
4742 5510 1.910819 GTTGTTGCATATTTGGCGACG 59.089 47.619 0.00 0.00 46.44 5.12
4762 5553 6.635297 GACGTTGTCGATTTTTAACAACTC 57.365 37.500 13.70 8.02 46.62 3.01
4763 5554 6.354039 ACGTTGTCGATTTTTAACAACTCT 57.646 33.333 13.70 0.00 46.62 3.24
4800 5606 3.364549 AGCTCTCTCTGCTTACATGTCT 58.635 45.455 0.00 0.00 37.52 3.41
4801 5607 3.130869 AGCTCTCTCTGCTTACATGTCTG 59.869 47.826 0.00 0.00 37.52 3.51
4802 5608 3.446799 CTCTCTCTGCTTACATGTCTGC 58.553 50.000 0.00 8.91 0.00 4.26
4803 5609 2.827921 TCTCTCTGCTTACATGTCTGCA 59.172 45.455 19.90 19.90 0.00 4.41
4809 5615 4.952262 TGCTTACATGTCTGCAGAATTC 57.048 40.909 20.19 6.95 0.00 2.17
4810 5616 3.371898 TGCTTACATGTCTGCAGAATTCG 59.628 43.478 20.19 9.95 0.00 3.34
4811 5617 3.786818 GCTTACATGTCTGCAGAATTCGC 60.787 47.826 20.19 10.96 0.00 4.70
4812 5618 2.105006 ACATGTCTGCAGAATTCGCT 57.895 45.000 20.19 0.00 0.00 4.93
4813 5619 3.251479 ACATGTCTGCAGAATTCGCTA 57.749 42.857 20.19 0.00 0.00 4.26
4817 5673 4.864916 TGTCTGCAGAATTCGCTATTTC 57.135 40.909 20.19 1.49 0.00 2.17
4818 5674 4.252878 TGTCTGCAGAATTCGCTATTTCA 58.747 39.130 20.19 4.46 0.00 2.69
4820 5676 3.306973 TCTGCAGAATTCGCTATTTCACG 59.693 43.478 15.67 0.00 0.00 4.35
4825 5681 4.007659 AGAATTCGCTATTTCACGGGTTT 58.992 39.130 0.00 0.00 0.00 3.27
4828 5684 2.768698 TCGCTATTTCACGGGTTTTCA 58.231 42.857 0.00 0.00 0.00 2.69
4865 5736 2.734673 CTGCGCTCTCTTTGCCGTC 61.735 63.158 9.73 0.00 0.00 4.79
4866 5737 3.491652 GCGCTCTCTTTGCCGTCC 61.492 66.667 0.00 0.00 0.00 4.79
4867 5738 3.181967 CGCTCTCTTTGCCGTCCG 61.182 66.667 0.00 0.00 0.00 4.79
4870 5741 4.388499 TCTCTTTGCCGTCCGCCC 62.388 66.667 0.00 0.00 36.24 6.13
4882 5753 4.803426 CCGCCCTGTCGCTGACTC 62.803 72.222 9.49 0.00 33.15 3.36
4883 5754 4.056125 CGCCCTGTCGCTGACTCA 62.056 66.667 9.49 0.00 33.15 3.41
4885 5756 1.078848 GCCCTGTCGCTGACTCATT 60.079 57.895 9.49 0.00 33.15 2.57
4886 5757 1.364626 GCCCTGTCGCTGACTCATTG 61.365 60.000 9.49 0.00 33.15 2.82
4888 5759 1.134580 CCCTGTCGCTGACTCATTGAT 60.135 52.381 9.49 0.00 33.15 2.57
4891 5762 3.519579 CTGTCGCTGACTCATTGATCTT 58.480 45.455 9.49 0.00 33.15 2.40
4892 5763 3.256558 TGTCGCTGACTCATTGATCTTG 58.743 45.455 9.49 0.00 33.15 3.02
4893 5764 2.606725 GTCGCTGACTCATTGATCTTGG 59.393 50.000 0.00 0.00 0.00 3.61
4895 5766 1.674962 GCTGACTCATTGATCTTGGCC 59.325 52.381 0.00 0.00 0.00 5.36
4898 5769 1.002069 ACTCATTGATCTTGGCCCCA 58.998 50.000 0.00 0.00 0.00 4.96
4899 5770 1.572415 ACTCATTGATCTTGGCCCCAT 59.428 47.619 0.00 0.00 0.00 4.00
4900 5771 2.023695 ACTCATTGATCTTGGCCCCATT 60.024 45.455 0.00 0.00 0.00 3.16
4901 5772 3.205056 ACTCATTGATCTTGGCCCCATTA 59.795 43.478 0.00 0.00 0.00 1.90
4904 5775 0.182537 TGATCTTGGCCCCATTACCG 59.817 55.000 0.00 0.00 0.00 4.02
4905 5776 1.152756 ATCTTGGCCCCATTACCGC 60.153 57.895 0.00 0.00 0.00 5.68
4906 5777 2.640581 ATCTTGGCCCCATTACCGCC 62.641 60.000 0.00 0.00 43.32 6.13
4909 5780 4.434354 GGCCCCATTACCGCCACA 62.434 66.667 0.00 0.00 42.52 4.17
4910 5781 3.138128 GCCCCATTACCGCCACAC 61.138 66.667 0.00 0.00 0.00 3.82
4911 5782 2.353189 CCCCATTACCGCCACACA 59.647 61.111 0.00 0.00 0.00 3.72
4914 5785 0.891449 CCCATTACCGCCACACACAA 60.891 55.000 0.00 0.00 0.00 3.33
4915 5786 0.955178 CCATTACCGCCACACACAAA 59.045 50.000 0.00 0.00 0.00 2.83
4916 5787 1.068610 CCATTACCGCCACACACAAAG 60.069 52.381 0.00 0.00 0.00 2.77
4920 5817 0.466543 ACCGCCACACACAAAGTAGA 59.533 50.000 0.00 0.00 0.00 2.59
4934 5831 6.202954 ACACAAAGTAGAAGAACATCCGAAAG 59.797 38.462 0.00 0.00 0.00 2.62
5004 7176 2.575532 TGACTTGTTTTGAGCAGGAGG 58.424 47.619 0.00 0.00 0.00 4.30
5008 7180 2.859165 TGTTTTGAGCAGGAGGTAGG 57.141 50.000 0.00 0.00 0.00 3.18
5009 7181 2.334977 TGTTTTGAGCAGGAGGTAGGA 58.665 47.619 0.00 0.00 0.00 2.94
5010 7182 2.708861 TGTTTTGAGCAGGAGGTAGGAA 59.291 45.455 0.00 0.00 0.00 3.36
5011 7183 3.137544 TGTTTTGAGCAGGAGGTAGGAAA 59.862 43.478 0.00 0.00 0.00 3.13
5012 7184 4.202567 TGTTTTGAGCAGGAGGTAGGAAAT 60.203 41.667 0.00 0.00 0.00 2.17
5013 7185 4.657814 TTTGAGCAGGAGGTAGGAAATT 57.342 40.909 0.00 0.00 0.00 1.82
5014 7186 4.657814 TTGAGCAGGAGGTAGGAAATTT 57.342 40.909 0.00 0.00 0.00 1.82
5015 7187 4.222124 TGAGCAGGAGGTAGGAAATTTC 57.778 45.455 9.83 9.83 0.00 2.17
5031 7203 5.943416 GGAAATTTCCCCCAATAACTTTTGG 59.057 40.000 24.44 0.00 41.62 3.28
5077 7249 4.682021 AGGGAACTCCATTCAAATTCCT 57.318 40.909 0.00 0.00 39.30 3.36
5078 7250 5.796502 AGGGAACTCCATTCAAATTCCTA 57.203 39.130 0.00 0.00 39.30 2.94
5079 7251 6.152638 AGGGAACTCCATTCAAATTCCTAA 57.847 37.500 0.00 0.00 39.30 2.69
5080 7252 6.561294 AGGGAACTCCATTCAAATTCCTAAA 58.439 36.000 0.00 0.00 39.30 1.85
5081 7253 6.665248 AGGGAACTCCATTCAAATTCCTAAAG 59.335 38.462 0.00 0.00 39.30 1.85
5082 7254 6.663523 GGGAACTCCATTCAAATTCCTAAAGA 59.336 38.462 0.00 0.00 39.30 2.52
5083 7255 7.148000 GGGAACTCCATTCAAATTCCTAAAGAG 60.148 40.741 0.00 0.00 39.30 2.85
5084 7256 7.611855 GGAACTCCATTCAAATTCCTAAAGAGA 59.388 37.037 0.00 0.00 39.30 3.10
5085 7257 8.940397 AACTCCATTCAAATTCCTAAAGAGAA 57.060 30.769 0.00 0.00 0.00 2.87
5086 7258 8.572855 ACTCCATTCAAATTCCTAAAGAGAAG 57.427 34.615 0.00 0.00 0.00 2.85
5087 7259 8.386264 ACTCCATTCAAATTCCTAAAGAGAAGA 58.614 33.333 0.00 0.00 0.00 2.87
5088 7260 8.567285 TCCATTCAAATTCCTAAAGAGAAGAC 57.433 34.615 0.00 0.00 0.00 3.01
5089 7261 7.611855 TCCATTCAAATTCCTAAAGAGAAGACC 59.388 37.037 0.00 0.00 0.00 3.85
5090 7262 7.394359 CCATTCAAATTCCTAAAGAGAAGACCA 59.606 37.037 0.00 0.00 0.00 4.02
5091 7263 7.745620 TTCAAATTCCTAAAGAGAAGACCAC 57.254 36.000 0.00 0.00 0.00 4.16
5092 7264 7.079451 TCAAATTCCTAAAGAGAAGACCACT 57.921 36.000 0.00 0.00 0.00 4.00
5093 7265 7.518188 TCAAATTCCTAAAGAGAAGACCACTT 58.482 34.615 0.00 0.00 39.24 3.16
5094 7266 7.998964 TCAAATTCCTAAAGAGAAGACCACTTT 59.001 33.333 0.00 0.00 36.39 2.66
5095 7267 9.284968 CAAATTCCTAAAGAGAAGACCACTTTA 57.715 33.333 0.00 0.00 36.39 1.85
5104 7276 8.840200 AAGAGAAGACCACTTTATATAGTCCA 57.160 34.615 0.00 0.00 36.39 4.02
5105 7277 8.840200 AGAGAAGACCACTTTATATAGTCCAA 57.160 34.615 0.00 0.00 36.39 3.53
5106 7278 8.697292 AGAGAAGACCACTTTATATAGTCCAAC 58.303 37.037 0.00 0.00 36.39 3.77
5107 7279 8.375493 AGAAGACCACTTTATATAGTCCAACA 57.625 34.615 0.00 0.00 36.39 3.33
5108 7280 8.822805 AGAAGACCACTTTATATAGTCCAACAA 58.177 33.333 0.00 0.00 36.39 2.83
5109 7281 9.444600 GAAGACCACTTTATATAGTCCAACAAA 57.555 33.333 0.00 0.00 36.39 2.83
5110 7282 9.975218 AAGACCACTTTATATAGTCCAACAAAT 57.025 29.630 0.00 0.00 31.71 2.32
5111 7283 9.975218 AGACCACTTTATATAGTCCAACAAATT 57.025 29.630 0.00 0.00 0.00 1.82
5120 7292 6.759497 ATAGTCCAACAAATTAGGCTCAAC 57.241 37.500 0.00 0.00 0.00 3.18
5121 7293 4.469657 AGTCCAACAAATTAGGCTCAACA 58.530 39.130 0.00 0.00 0.00 3.33
5122 7294 4.892934 AGTCCAACAAATTAGGCTCAACAA 59.107 37.500 0.00 0.00 0.00 2.83
5123 7295 4.982295 GTCCAACAAATTAGGCTCAACAAC 59.018 41.667 0.00 0.00 0.00 3.32
5124 7296 4.892934 TCCAACAAATTAGGCTCAACAACT 59.107 37.500 0.00 0.00 0.00 3.16
5125 7297 5.009610 TCCAACAAATTAGGCTCAACAACTC 59.990 40.000 0.00 0.00 0.00 3.01
5126 7298 5.221224 CCAACAAATTAGGCTCAACAACTCA 60.221 40.000 0.00 0.00 0.00 3.41
5127 7299 6.272318 CAACAAATTAGGCTCAACAACTCAA 58.728 36.000 0.00 0.00 0.00 3.02
5128 7300 5.831997 ACAAATTAGGCTCAACAACTCAAC 58.168 37.500 0.00 0.00 0.00 3.18
5129 7301 5.359576 ACAAATTAGGCTCAACAACTCAACA 59.640 36.000 0.00 0.00 0.00 3.33
5130 7302 6.040842 ACAAATTAGGCTCAACAACTCAACAT 59.959 34.615 0.00 0.00 0.00 2.71
5131 7303 7.230510 ACAAATTAGGCTCAACAACTCAACATA 59.769 33.333 0.00 0.00 0.00 2.29
5132 7304 6.743575 ATTAGGCTCAACAACTCAACATAC 57.256 37.500 0.00 0.00 0.00 2.39
5133 7305 4.085357 AGGCTCAACAACTCAACATACA 57.915 40.909 0.00 0.00 0.00 2.29
5134 7306 4.655963 AGGCTCAACAACTCAACATACAT 58.344 39.130 0.00 0.00 0.00 2.29
5135 7307 4.456911 AGGCTCAACAACTCAACATACATG 59.543 41.667 0.00 0.00 0.00 3.21
5136 7308 4.216257 GGCTCAACAACTCAACATACATGT 59.784 41.667 2.69 2.69 44.20 3.21
5137 7309 5.411361 GGCTCAACAACTCAACATACATGTA 59.589 40.000 8.27 8.27 40.80 2.29
5138 7310 6.402550 GGCTCAACAACTCAACATACATGTAG 60.403 42.308 11.91 6.29 40.80 2.74
5139 7311 6.368791 GCTCAACAACTCAACATACATGTAGA 59.631 38.462 11.91 2.24 40.80 2.59
5140 7312 7.065085 GCTCAACAACTCAACATACATGTAGAT 59.935 37.037 11.91 0.00 40.80 1.98
5141 7313 8.255394 TCAACAACTCAACATACATGTAGATG 57.745 34.615 11.91 9.24 40.80 2.90
5142 7314 7.334171 TCAACAACTCAACATACATGTAGATGG 59.666 37.037 11.91 3.72 40.80 3.51
5143 7315 5.586243 ACAACTCAACATACATGTAGATGGC 59.414 40.000 11.91 0.00 40.80 4.40
5144 7316 5.620738 ACTCAACATACATGTAGATGGCT 57.379 39.130 11.91 0.00 40.80 4.75
5145 7317 5.994250 ACTCAACATACATGTAGATGGCTT 58.006 37.500 11.91 0.00 40.80 4.35
5146 7318 6.051717 ACTCAACATACATGTAGATGGCTTC 58.948 40.000 11.91 0.00 40.80 3.86
5147 7319 6.126940 ACTCAACATACATGTAGATGGCTTCT 60.127 38.462 11.91 8.09 40.80 2.85
5148 7320 6.653020 TCAACATACATGTAGATGGCTTCTT 58.347 36.000 11.91 0.00 40.80 2.52
5149 7321 7.112122 TCAACATACATGTAGATGGCTTCTTT 58.888 34.615 11.91 0.00 40.80 2.52
5150 7322 7.611467 TCAACATACATGTAGATGGCTTCTTTT 59.389 33.333 11.91 0.00 40.80 2.27
5151 7323 7.944729 ACATACATGTAGATGGCTTCTTTTT 57.055 32.000 11.91 0.00 39.68 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 7.180051 TCCATAAAGGGCAAATTAGTCATTTGT 59.820 33.333 10.64 0.00 43.91 2.83
19 20 7.555087 TCCATAAAGGGCAAATTAGTCATTTG 58.445 34.615 5.55 5.55 44.37 2.32
20 21 7.732222 TCCATAAAGGGCAAATTAGTCATTT 57.268 32.000 0.00 0.00 38.24 2.32
21 22 7.919385 ATCCATAAAGGGCAAATTAGTCATT 57.081 32.000 0.00 0.00 38.24 2.57
22 23 7.202029 CCAATCCATAAAGGGCAAATTAGTCAT 60.202 37.037 0.00 0.00 38.24 3.06
23 24 6.098124 CCAATCCATAAAGGGCAAATTAGTCA 59.902 38.462 0.00 0.00 38.24 3.41
24 25 6.323739 TCCAATCCATAAAGGGCAAATTAGTC 59.676 38.462 0.00 0.00 38.24 2.59
25 26 6.201591 TCCAATCCATAAAGGGCAAATTAGT 58.798 36.000 0.00 0.00 38.24 2.24
26 27 6.729690 TCCAATCCATAAAGGGCAAATTAG 57.270 37.500 0.00 0.00 38.24 1.73
27 28 7.688918 ATTCCAATCCATAAAGGGCAAATTA 57.311 32.000 0.00 0.00 38.24 1.40
28 29 6.579850 ATTCCAATCCATAAAGGGCAAATT 57.420 33.333 0.00 0.00 38.24 1.82
29 30 6.178607 GATTCCAATCCATAAAGGGCAAAT 57.821 37.500 0.00 0.00 38.24 2.32
30 31 5.612725 GATTCCAATCCATAAAGGGCAAA 57.387 39.130 0.00 0.00 38.24 3.68
102 103 2.806945 TGAGGAGTGGGCAATTAAGG 57.193 50.000 0.00 0.00 0.00 2.69
135 141 2.981805 TGACAAATACGGTCGAACTTCG 59.018 45.455 4.72 4.72 42.10 3.79
170 176 2.969443 GGCGTGTGGCATGTATTATC 57.031 50.000 0.00 0.00 46.16 1.75
182 188 3.394874 CTCGTCGTGTGGCGTGTG 61.395 66.667 0.00 0.00 42.13 3.82
183 189 4.640855 CCTCGTCGTGTGGCGTGT 62.641 66.667 0.00 0.00 42.13 4.49
184 190 4.640855 ACCTCGTCGTGTGGCGTG 62.641 66.667 0.00 0.00 42.13 5.34
185 191 4.640855 CACCTCGTCGTGTGGCGT 62.641 66.667 8.99 0.00 42.13 5.68
186 192 4.640855 ACACCTCGTCGTGTGGCG 62.641 66.667 17.50 5.71 45.19 5.69
320 329 4.481112 GATGGCCGCCGTTGCTTG 62.481 66.667 5.36 0.00 34.43 4.01
379 388 0.685097 TAGGACTCTGGTGTGTTGGC 59.315 55.000 0.00 0.00 0.00 4.52
386 395 2.587522 TCGGATGATAGGACTCTGGTG 58.412 52.381 0.00 0.00 0.00 4.17
389 398 3.823304 TGTCATCGGATGATAGGACTCTG 59.177 47.826 22.45 0.00 42.04 3.35
391 400 4.460731 TGATGTCATCGGATGATAGGACTC 59.539 45.833 22.45 14.41 42.04 3.36
397 407 6.594788 TGAGATTGATGTCATCGGATGATA 57.405 37.500 22.45 20.13 42.04 2.15
398 408 5.479124 TGAGATTGATGTCATCGGATGAT 57.521 39.130 22.45 8.78 42.04 2.45
427 437 6.603237 TTGTAATCCTGATTAAGCACGATG 57.397 37.500 6.06 0.00 35.30 3.84
458 468 7.541162 TCTTGTTTTGCTGATGGAATATTCTG 58.459 34.615 14.95 2.88 0.00 3.02
469 479 8.284945 TCTAATGCTAATCTTGTTTTGCTGAT 57.715 30.769 0.00 0.00 0.00 2.90
487 500 7.295201 TGTCTGTTTAATTCGTGTTCTAATGC 58.705 34.615 0.00 0.00 0.00 3.56
488 501 9.658475 TTTGTCTGTTTAATTCGTGTTCTAATG 57.342 29.630 0.00 0.00 0.00 1.90
490 503 8.666573 TGTTTGTCTGTTTAATTCGTGTTCTAA 58.333 29.630 0.00 0.00 0.00 2.10
492 505 7.079182 TGTTTGTCTGTTTAATTCGTGTTCT 57.921 32.000 0.00 0.00 0.00 3.01
556 569 4.973055 TCGGGTGCGGTCGGTTTG 62.973 66.667 0.00 0.00 0.00 2.93
928 975 2.175236 GCCTGGAGCTTTTTCCGAG 58.825 57.895 0.00 0.00 40.27 4.63
929 976 4.397348 GCCTGGAGCTTTTTCCGA 57.603 55.556 0.00 0.00 40.27 4.55
1179 1739 1.673337 GTTGGCGTTGGGGTAGGAC 60.673 63.158 0.00 0.00 0.00 3.85
1506 2072 3.369388 GGAGGAGGAGGAGGGGGT 61.369 72.222 0.00 0.00 0.00 4.95
1509 2075 2.612251 GGAGGAGGAGGAGGAGGG 59.388 72.222 0.00 0.00 0.00 4.30
1510 2076 2.612251 GGGAGGAGGAGGAGGAGG 59.388 72.222 0.00 0.00 0.00 4.30
1511 2077 2.328589 TGGGGAGGAGGAGGAGGAG 61.329 68.421 0.00 0.00 0.00 3.69
1512 2078 2.204624 TGGGGAGGAGGAGGAGGA 60.205 66.667 0.00 0.00 0.00 3.71
1513 2079 2.041405 GTGGGGAGGAGGAGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
1514 2080 0.980231 CAAGTGGGGAGGAGGAGGAG 60.980 65.000 0.00 0.00 0.00 3.69
1526 2092 3.369546 AACAAAAATCGCTCAAGTGGG 57.630 42.857 0.00 0.00 0.00 4.61
1529 2095 6.801539 TCTGATAACAAAAATCGCTCAAGT 57.198 33.333 0.00 0.00 0.00 3.16
1584 2150 0.317603 ATCCGAGATCGCCGTTAACG 60.318 55.000 20.99 20.99 38.18 3.18
1642 2231 0.683504 TCTCTCCCTAGGACAACGGC 60.684 60.000 11.48 0.00 0.00 5.68
1692 2290 2.970609 CCGTACGTCAACAAATTTGCAG 59.029 45.455 18.12 10.70 0.00 4.41
1741 2339 3.764237 TGCTTCCGTCCTAAGAAAAGT 57.236 42.857 0.00 0.00 0.00 2.66
1792 2390 3.616086 GGTGCCATTAACCCCTGC 58.384 61.111 0.00 0.00 0.00 4.85
1851 2449 7.409697 CCACAGATCGGAATAATACTTTTGTG 58.590 38.462 0.00 0.00 0.00 3.33
1929 2528 1.073964 CTTGACTGACAGATGCACCG 58.926 55.000 10.08 0.00 0.00 4.94
1955 2558 3.492383 CGTATGATCAACTGGTCAGCATC 59.508 47.826 0.00 0.00 0.00 3.91
1956 2559 3.132824 TCGTATGATCAACTGGTCAGCAT 59.867 43.478 0.00 0.00 0.00 3.79
1957 2560 2.495669 TCGTATGATCAACTGGTCAGCA 59.504 45.455 0.00 0.00 0.00 4.41
1958 2561 3.165058 TCGTATGATCAACTGGTCAGC 57.835 47.619 0.00 0.00 0.00 4.26
1959 2562 4.748892 AGTTCGTATGATCAACTGGTCAG 58.251 43.478 0.00 0.00 0.00 3.51
2005 2608 7.162082 GTCAGCTAGTATTATGGTTAATGCCT 58.838 38.462 0.00 0.00 32.57 4.75
2019 2622 9.649167 AAAATAGTAAACGTTGTCAGCTAGTAT 57.351 29.630 0.00 0.00 0.00 2.12
2020 2623 9.480053 AAAAATAGTAAACGTTGTCAGCTAGTA 57.520 29.630 0.00 0.00 0.00 1.82
2021 2624 7.958053 AAAATAGTAAACGTTGTCAGCTAGT 57.042 32.000 0.00 0.00 0.00 2.57
2044 2648 7.832769 AGTGGTACTGAAAAGCTTAACAAAAA 58.167 30.769 0.00 0.00 0.00 1.94
2049 2654 5.699458 TGCTAGTGGTACTGAAAAGCTTAAC 59.301 40.000 0.00 0.00 29.80 2.01
2084 2694 5.121105 TCACCATAGAGAACAATCTGCATG 58.879 41.667 0.00 0.00 35.54 4.06
2099 2712 9.950496 AATAATAAGACAGCCTAATCACCATAG 57.050 33.333 0.00 0.00 0.00 2.23
2215 2834 0.823356 TGCTCAAGTGAAAGTGGCCC 60.823 55.000 0.00 0.00 0.00 5.80
2232 2851 1.536709 CCGCCTGCCATTAATTCTTGC 60.537 52.381 0.00 0.00 0.00 4.01
2236 2858 1.268539 CGAACCGCCTGCCATTAATTC 60.269 52.381 0.00 0.00 0.00 2.17
2313 2935 6.599356 AACAACAACTACCCAAGAAAAACT 57.401 33.333 0.00 0.00 0.00 2.66
2314 2936 6.091577 CCAAACAACAACTACCCAAGAAAAAC 59.908 38.462 0.00 0.00 0.00 2.43
2320 2942 3.951680 AGTCCAAACAACAACTACCCAAG 59.048 43.478 0.00 0.00 0.00 3.61
2331 2953 4.187694 TCCAATTGCAAAGTCCAAACAAC 58.812 39.130 1.71 0.00 0.00 3.32
2419 3041 2.627945 TCCATTGCATAGTCGGTTGAC 58.372 47.619 0.00 0.00 45.86 3.18
2426 3052 5.357878 TCTGGTTGATTTCCATTGCATAGTC 59.642 40.000 0.00 0.00 34.26 2.59
2436 3062 4.639078 TGTCAGATCTGGTTGATTTCCA 57.361 40.909 22.42 0.00 35.14 3.53
2441 3067 8.585471 ATTAAACATTGTCAGATCTGGTTGAT 57.415 30.769 22.42 12.06 38.27 2.57
2443 3069 7.752239 GTGATTAAACATTGTCAGATCTGGTTG 59.248 37.037 22.42 15.73 0.00 3.77
2532 3171 4.328983 CAGCAAACCTACCACATACTAACG 59.671 45.833 0.00 0.00 0.00 3.18
2569 3211 2.557056 CCCAATATCAATGGCAGCTGAG 59.443 50.000 20.43 0.82 36.58 3.35
2620 3262 2.102252 TCAATTTCCTGCCAAAGCGTTT 59.898 40.909 0.00 0.00 44.31 3.60
2623 3265 2.165030 AGATCAATTTCCTGCCAAAGCG 59.835 45.455 0.00 0.00 44.31 4.68
2647 3292 6.645003 GGGTCCAAATCATCAAACTGTTTTAC 59.355 38.462 2.41 0.00 0.00 2.01
2654 3299 4.262592 GCAAAGGGTCCAAATCATCAAACT 60.263 41.667 0.00 0.00 0.00 2.66
2661 3306 1.133199 ACAGGCAAAGGGTCCAAATCA 60.133 47.619 0.00 0.00 0.00 2.57
2663 3308 1.341080 CACAGGCAAAGGGTCCAAAT 58.659 50.000 0.00 0.00 0.00 2.32
2682 3330 5.560724 TCATCTATATAGGTGCCAAAAGGC 58.439 41.667 16.91 0.00 34.44 4.35
2683 3331 6.773638 ACTCATCTATATAGGTGCCAAAAGG 58.226 40.000 16.91 4.95 34.44 3.11
2685 3333 9.778741 CTTAACTCATCTATATAGGTGCCAAAA 57.221 33.333 16.91 8.64 34.44 2.44
2697 3345 6.041979 TGCCATGCTCACTTAACTCATCTATA 59.958 38.462 0.00 0.00 0.00 1.31
2731 3379 4.947388 ACTTGCTTCTTCTGTTAACACCAA 59.053 37.500 3.59 0.00 0.00 3.67
2734 3382 4.318831 CCGACTTGCTTCTTCTGTTAACAC 60.319 45.833 3.59 0.00 0.00 3.32
2735 3383 3.807622 CCGACTTGCTTCTTCTGTTAACA 59.192 43.478 8.28 8.28 0.00 2.41
2738 3386 3.181469 ACACCGACTTGCTTCTTCTGTTA 60.181 43.478 0.00 0.00 0.00 2.41
2739 3387 2.213499 CACCGACTTGCTTCTTCTGTT 58.787 47.619 0.00 0.00 0.00 3.16
2740 3388 1.139058 ACACCGACTTGCTTCTTCTGT 59.861 47.619 0.00 0.00 0.00 3.41
2741 3389 1.528586 CACACCGACTTGCTTCTTCTG 59.471 52.381 0.00 0.00 0.00 3.02
2742 3390 1.412710 TCACACCGACTTGCTTCTTCT 59.587 47.619 0.00 0.00 0.00 2.85
2748 3396 0.534877 TGCAATCACACCGACTTGCT 60.535 50.000 7.52 0.00 43.33 3.91
2750 3398 2.981805 CAATTGCAATCACACCGACTTG 59.018 45.455 13.38 0.00 0.00 3.16
2755 3404 1.700523 CCACAATTGCAATCACACCG 58.299 50.000 13.38 0.31 0.00 4.94
2766 3415 4.696877 TGTCATCTAAGAGTGCCACAATTG 59.303 41.667 3.24 3.24 0.00 2.32
2769 3418 4.558226 ATGTCATCTAAGAGTGCCACAA 57.442 40.909 0.00 0.00 0.00 3.33
2797 3446 7.038048 TGATGCTTCAGTCAACAGTAATAGAG 58.962 38.462 0.00 0.00 0.00 2.43
2822 3471 7.382218 GTCAACAGCAAAATAGTTACTGCAAAT 59.618 33.333 2.78 0.00 37.26 2.32
2826 3475 5.853282 CAGTCAACAGCAAAATAGTTACTGC 59.147 40.000 0.00 0.00 34.96 4.40
2827 3476 7.189693 TCAGTCAACAGCAAAATAGTTACTG 57.810 36.000 0.00 4.78 33.38 2.74
2828 3477 7.573843 GCATCAGTCAACAGCAAAATAGTTACT 60.574 37.037 0.00 0.00 0.00 2.24
2833 3482 5.050644 TGCATCAGTCAACAGCAAAATAG 57.949 39.130 0.00 0.00 31.42 1.73
2869 3521 2.111043 AACTCCCTGCACACACCG 59.889 61.111 0.00 0.00 0.00 4.94
2903 3555 3.067883 TGATGCTCTCTACTGTGCTGATC 59.932 47.826 0.00 0.00 0.00 2.92
2904 3556 3.029570 TGATGCTCTCTACTGTGCTGAT 58.970 45.455 0.00 0.00 0.00 2.90
2966 3618 1.123077 TGTCACACTCCACAAGCTCT 58.877 50.000 0.00 0.00 0.00 4.09
3089 3741 2.854963 TCACATCTGCCATCAATAGCC 58.145 47.619 0.00 0.00 0.00 3.93
3092 3744 5.687780 AGAACATCACATCTGCCATCAATA 58.312 37.500 0.00 0.00 0.00 1.90
3134 3786 6.666417 CAAGGACTATATGAAGCAAGCAATC 58.334 40.000 0.00 0.00 0.00 2.67
3135 3787 5.009410 GCAAGGACTATATGAAGCAAGCAAT 59.991 40.000 0.00 0.00 0.00 3.56
3136 3788 4.336433 GCAAGGACTATATGAAGCAAGCAA 59.664 41.667 0.00 0.00 0.00 3.91
3137 3789 3.879295 GCAAGGACTATATGAAGCAAGCA 59.121 43.478 0.00 0.00 0.00 3.91
3142 3794 4.645535 TGGATGCAAGGACTATATGAAGC 58.354 43.478 0.00 0.00 0.00 3.86
3173 3825 1.136141 CAGTCAGAACATCAGCAACGC 60.136 52.381 0.00 0.00 0.00 4.84
3200 3852 7.115947 GGCATTTTTCTGCAAAGATATGATAGC 59.884 37.037 0.00 0.00 44.12 2.97
3201 3853 8.139350 TGGCATTTTTCTGCAAAGATATGATAG 58.861 33.333 0.00 0.00 44.12 2.08
3226 3878 2.159198 GCCATCAATGCTAACCACCTTG 60.159 50.000 0.00 0.00 0.00 3.61
3235 3887 3.541996 TCTTCGAAGCCATCAATGCTA 57.458 42.857 20.56 0.00 38.34 3.49
3250 3902 3.062639 CGTCATTTTCAGGGACATCTTCG 59.937 47.826 0.00 0.00 0.00 3.79
3271 3923 3.236971 GCCTTCTGCAGCGATTTCTCG 62.237 57.143 9.47 0.00 43.30 4.04
3383 4035 5.221126 CCTGAATGCTGGATAAAAGTTAGCC 60.221 44.000 0.00 0.00 35.28 3.93
3430 4083 8.781951 ACCCTGTAATATATATCAATCAAGGGG 58.218 37.037 19.65 12.50 33.93 4.79
3431 4084 9.618890 CACCCTGTAATATATATCAATCAAGGG 57.381 37.037 16.66 16.66 35.61 3.95
3443 4096 6.844388 TCCACTGAAGACACCCTGTAATATAT 59.156 38.462 0.00 0.00 0.00 0.86
3522 4175 1.053424 TCCAGTAGTCCTTGCCGTTT 58.947 50.000 0.00 0.00 0.00 3.60
3690 4343 4.083862 GGCGGTGAGGGAGGTGTC 62.084 72.222 0.00 0.00 0.00 3.67
3777 4430 3.782244 CCGAACGAGCAGCAGCAC 61.782 66.667 3.17 0.00 45.49 4.40
3912 4565 0.320771 AAGTGGTTACCGCTGAGCAG 60.321 55.000 18.90 0.00 44.35 4.24
3927 4580 8.514594 TGATAATAAACCAAGAAAGCAGAAGTG 58.485 33.333 0.00 0.00 0.00 3.16
3981 4637 9.726232 CCAAGACATAATCATAAAACTGATGTG 57.274 33.333 0.00 0.00 36.03 3.21
3987 4643 9.520515 ACACTTCCAAGACATAATCATAAAACT 57.479 29.630 0.00 0.00 0.00 2.66
3993 4649 7.170965 ACTGAACACTTCCAAGACATAATCAT 58.829 34.615 0.00 0.00 0.00 2.45
3996 4652 6.772716 ACAACTGAACACTTCCAAGACATAAT 59.227 34.615 0.00 0.00 0.00 1.28
4006 4662 3.119495 ACTTGCAACAACTGAACACTTCC 60.119 43.478 0.00 0.00 0.00 3.46
4018 4680 4.385825 CAGACCTACCTAACTTGCAACAA 58.614 43.478 0.00 0.00 0.00 2.83
4021 4683 3.244582 TCCAGACCTACCTAACTTGCAA 58.755 45.455 0.00 0.00 0.00 4.08
4033 4695 3.239449 ACGGCATGAATATCCAGACCTA 58.761 45.455 0.00 0.00 0.00 3.08
4036 4698 3.372206 GCATACGGCATGAATATCCAGAC 59.628 47.826 0.00 0.00 43.97 3.51
4078 4740 2.108075 TGGTCTGCTCAATTCCAGGAAA 59.892 45.455 5.81 0.00 0.00 3.13
4079 4741 1.704628 TGGTCTGCTCAATTCCAGGAA 59.295 47.619 3.72 3.72 0.00 3.36
4081 4743 2.089980 CTTGGTCTGCTCAATTCCAGG 58.910 52.381 0.00 0.00 0.00 4.45
4084 4746 3.149196 TGTTCTTGGTCTGCTCAATTCC 58.851 45.455 0.00 0.00 0.00 3.01
4085 4747 3.365767 GCTGTTCTTGGTCTGCTCAATTC 60.366 47.826 0.00 0.00 0.00 2.17
4086 4748 2.555757 GCTGTTCTTGGTCTGCTCAATT 59.444 45.455 0.00 0.00 0.00 2.32
4155 4919 1.653835 CTCTCGACGAGCTCATGCG 60.654 63.158 20.11 13.49 45.42 4.73
4162 4926 2.276994 CGCTGTCTCTCGACGAGC 60.277 66.667 20.11 7.20 43.21 5.03
4170 4934 4.057428 GACACCGCCGCTGTCTCT 62.057 66.667 5.33 0.00 35.99 3.10
4175 4939 2.509336 CCTTAGACACCGCCGCTG 60.509 66.667 0.00 0.00 0.00 5.18
4176 4940 4.452733 GCCTTAGACACCGCCGCT 62.453 66.667 0.00 0.00 0.00 5.52
4193 4957 1.472662 ATCCGCATCCTTCTACCCCG 61.473 60.000 0.00 0.00 0.00 5.73
4196 4960 0.946221 CGCATCCGCATCCTTCTACC 60.946 60.000 0.00 0.00 38.40 3.18
4211 4975 3.490890 GAGAAAAGCTCCGCGCAT 58.509 55.556 8.75 0.00 42.61 4.73
4242 5006 4.496175 CCAAATTTTGCACAAAGGCTTGTC 60.496 41.667 0.00 0.00 44.15 3.18
4265 5029 4.574599 ACAAAAGCAATGTCTGGTCTTC 57.425 40.909 0.00 0.00 33.58 2.87
4266 5030 5.376625 TCTACAAAAGCAATGTCTGGTCTT 58.623 37.500 0.00 0.00 33.58 3.01
4267 5031 4.973168 TCTACAAAAGCAATGTCTGGTCT 58.027 39.130 0.00 0.00 33.58 3.85
4268 5032 5.689383 TTCTACAAAAGCAATGTCTGGTC 57.311 39.130 0.00 0.00 33.58 4.02
4325 5091 4.650131 AGTAGGGGATATATAAAGCGAGCC 59.350 45.833 0.00 0.00 0.00 4.70
4355 5121 9.021807 ACAATGAACACATGTAGTAGTAGTAGT 57.978 33.333 0.00 0.00 0.00 2.73
4361 5127 9.803315 CTATGTACAATGAACACATGTAGTAGT 57.197 33.333 0.00 0.00 34.78 2.73
4362 5128 8.755941 GCTATGTACAATGAACACATGTAGTAG 58.244 37.037 0.00 0.00 34.78 2.57
4363 5129 8.474831 AGCTATGTACAATGAACACATGTAGTA 58.525 33.333 0.00 0.00 34.78 1.82
4364 5130 7.331026 AGCTATGTACAATGAACACATGTAGT 58.669 34.615 0.00 0.00 34.78 2.73
4365 5131 7.306225 CGAGCTATGTACAATGAACACATGTAG 60.306 40.741 0.00 0.00 34.78 2.74
4366 5132 6.475402 CGAGCTATGTACAATGAACACATGTA 59.525 38.462 0.00 0.00 34.78 2.29
4367 5133 5.291858 CGAGCTATGTACAATGAACACATGT 59.708 40.000 0.00 0.00 34.78 3.21
4368 5134 5.731278 CGAGCTATGTACAATGAACACATG 58.269 41.667 0.00 0.00 34.78 3.21
4369 5135 4.271049 GCGAGCTATGTACAATGAACACAT 59.729 41.667 0.00 0.00 36.82 3.21
4370 5136 3.616821 GCGAGCTATGTACAATGAACACA 59.383 43.478 0.00 0.00 0.00 3.72
4371 5137 3.865745 AGCGAGCTATGTACAATGAACAC 59.134 43.478 0.00 0.00 0.00 3.32
4372 5138 4.112634 GAGCGAGCTATGTACAATGAACA 58.887 43.478 0.00 0.00 0.00 3.18
4373 5139 3.491267 GGAGCGAGCTATGTACAATGAAC 59.509 47.826 0.00 0.00 0.00 3.18
4374 5140 3.492656 GGGAGCGAGCTATGTACAATGAA 60.493 47.826 0.00 0.00 0.00 2.57
4375 5141 2.035961 GGGAGCGAGCTATGTACAATGA 59.964 50.000 0.00 0.00 0.00 2.57
4376 5142 2.224042 TGGGAGCGAGCTATGTACAATG 60.224 50.000 0.00 0.00 0.00 2.82
4393 5159 2.969821 AGCACCAAGTACAAATGGGA 57.030 45.000 14.51 0.00 41.17 4.37
4406 5172 8.201464 TGACGAATATTCTTTAAGATAGCACCA 58.799 33.333 13.45 0.00 0.00 4.17
4410 5176 9.587461 GCTTTGACGAATATTCTTTAAGATAGC 57.413 33.333 13.45 9.14 0.00 2.97
4455 5222 6.252655 CACACATAAGCATCAAACATCATGTG 59.747 38.462 9.21 9.21 44.66 3.21
4461 5228 5.680408 GCATCCACACATAAGCATCAAACAT 60.680 40.000 0.00 0.00 0.00 2.71
4513 5280 2.540973 GGAAACTCGAACAGCAAACCAC 60.541 50.000 0.00 0.00 0.00 4.16
4516 5283 2.287009 CCAGGAAACTCGAACAGCAAAC 60.287 50.000 0.00 0.00 40.21 2.93
4522 5289 0.756294 TGCTCCAGGAAACTCGAACA 59.244 50.000 0.00 0.00 40.21 3.18
4529 5296 2.479566 TCAGATGTGCTCCAGGAAAC 57.520 50.000 0.00 0.00 0.00 2.78
4540 5307 9.552114 GTTCAGTTCATAAAGAAATCAGATGTG 57.448 33.333 0.00 0.00 38.13 3.21
4543 5310 7.607991 ACGGTTCAGTTCATAAAGAAATCAGAT 59.392 33.333 0.00 0.00 38.13 2.90
4548 5315 7.444183 TCTTCACGGTTCAGTTCATAAAGAAAT 59.556 33.333 0.00 0.00 38.13 2.17
4556 5323 7.687941 AATTAATCTTCACGGTTCAGTTCAT 57.312 32.000 0.00 0.00 0.00 2.57
4589 5356 7.172019 GCAATCCAATGATTTCAGAAACAAACT 59.828 33.333 0.00 0.00 39.20 2.66
4600 5367 7.144000 GTGATTCTAGGCAATCCAATGATTTC 58.856 38.462 2.61 0.00 39.20 2.17
4602 5369 6.131264 TGTGATTCTAGGCAATCCAATGATT 58.869 36.000 2.61 0.00 41.96 2.57
4603 5370 5.698104 TGTGATTCTAGGCAATCCAATGAT 58.302 37.500 2.61 0.00 32.51 2.45
4604 5371 5.114764 TGTGATTCTAGGCAATCCAATGA 57.885 39.130 2.61 0.00 32.51 2.57
4605 5372 7.514784 TTATGTGATTCTAGGCAATCCAATG 57.485 36.000 2.61 0.00 32.51 2.82
4606 5373 8.168725 AGATTATGTGATTCTAGGCAATCCAAT 58.831 33.333 2.61 0.28 32.51 3.16
4607 5374 7.520798 AGATTATGTGATTCTAGGCAATCCAA 58.479 34.615 2.61 0.00 32.51 3.53
4608 5375 7.083062 AGATTATGTGATTCTAGGCAATCCA 57.917 36.000 2.61 1.64 32.51 3.41
4609 5376 9.107177 CATAGATTATGTGATTCTAGGCAATCC 57.893 37.037 2.61 0.00 32.51 3.01
4610 5377 8.610896 GCATAGATTATGTGATTCTAGGCAATC 58.389 37.037 10.02 0.00 42.88 2.67
4611 5378 7.279536 CGCATAGATTATGTGATTCTAGGCAAT 59.720 37.037 13.90 0.00 46.77 3.56
4612 5379 6.591448 CGCATAGATTATGTGATTCTAGGCAA 59.409 38.462 13.90 0.00 46.77 4.52
4613 5380 6.101997 CGCATAGATTATGTGATTCTAGGCA 58.898 40.000 13.90 0.00 46.77 4.75
4614 5381 6.102663 ACGCATAGATTATGTGATTCTAGGC 58.897 40.000 14.54 5.92 46.77 3.93
4615 5382 8.539770 AAACGCATAGATTATGTGATTCTAGG 57.460 34.615 14.54 0.00 46.77 3.02
4646 5413 9.781834 CGGCTCAATTTAACTTCACATATTTAA 57.218 29.630 0.00 0.00 0.00 1.52
4647 5414 8.952278 ACGGCTCAATTTAACTTCACATATTTA 58.048 29.630 0.00 0.00 0.00 1.40
4648 5415 7.826690 ACGGCTCAATTTAACTTCACATATTT 58.173 30.769 0.00 0.00 0.00 1.40
4649 5416 7.391148 ACGGCTCAATTTAACTTCACATATT 57.609 32.000 0.00 0.00 0.00 1.28
4650 5417 7.120579 TGAACGGCTCAATTTAACTTCACATAT 59.879 33.333 0.00 0.00 0.00 1.78
4651 5418 6.428465 TGAACGGCTCAATTTAACTTCACATA 59.572 34.615 0.00 0.00 0.00 2.29
4652 5419 5.240623 TGAACGGCTCAATTTAACTTCACAT 59.759 36.000 0.00 0.00 0.00 3.21
4653 5420 4.576873 TGAACGGCTCAATTTAACTTCACA 59.423 37.500 0.00 0.00 0.00 3.58
4654 5421 5.103290 TGAACGGCTCAATTTAACTTCAC 57.897 39.130 0.00 0.00 0.00 3.18
4655 5422 5.957842 ATGAACGGCTCAATTTAACTTCA 57.042 34.783 0.00 0.00 37.67 3.02
4664 5431 9.825972 CGAAATTTATTATATGAACGGCTCAAT 57.174 29.630 0.00 0.00 37.67 2.57
4665 5432 8.832521 ACGAAATTTATTATATGAACGGCTCAA 58.167 29.630 0.00 0.00 37.67 3.02
4666 5433 8.279800 CACGAAATTTATTATATGAACGGCTCA 58.720 33.333 0.00 0.00 38.81 4.26
4667 5434 8.280497 ACACGAAATTTATTATATGAACGGCTC 58.720 33.333 0.00 0.00 0.00 4.70
4668 5435 8.149973 ACACGAAATTTATTATATGAACGGCT 57.850 30.769 0.00 0.00 0.00 5.52
4669 5436 7.532884 GGACACGAAATTTATTATATGAACGGC 59.467 37.037 0.00 0.00 0.00 5.68
4675 5442 8.559536 ACTGCAGGACACGAAATTTATTATATG 58.440 33.333 19.93 0.00 0.00 1.78
4686 5453 0.249868 CTCCACTGCAGGACACGAAA 60.250 55.000 19.93 0.00 33.19 3.46
4689 5456 2.047844 CCTCCACTGCAGGACACG 60.048 66.667 19.93 2.01 33.19 4.49
4690 5457 2.359230 GCCTCCACTGCAGGACAC 60.359 66.667 19.93 0.00 33.19 3.67
4691 5458 1.993701 TTTGCCTCCACTGCAGGACA 61.994 55.000 19.93 3.63 40.35 4.02
4692 5459 1.228245 TTTGCCTCCACTGCAGGAC 60.228 57.895 19.93 0.85 40.35 3.85
4693 5460 1.228245 GTTTGCCTCCACTGCAGGA 60.228 57.895 19.93 6.59 40.35 3.86
4695 5462 1.825090 TATGTTTGCCTCCACTGCAG 58.175 50.000 13.48 13.48 40.35 4.41
4696 5463 2.512692 ATATGTTTGCCTCCACTGCA 57.487 45.000 0.00 0.00 36.84 4.41
4698 5465 8.225603 ACTAAAATATATGTTTGCCTCCACTG 57.774 34.615 0.00 0.00 0.00 3.66
4699 5466 8.686334 CAACTAAAATATATGTTTGCCTCCACT 58.314 33.333 0.00 0.00 0.00 4.00
4701 5468 8.588290 ACAACTAAAATATATGTTTGCCTCCA 57.412 30.769 0.00 0.00 0.00 3.86
4702 5469 9.301153 CAACAACTAAAATATATGTTTGCCTCC 57.699 33.333 0.00 0.00 32.25 4.30
4703 5470 8.807581 GCAACAACTAAAATATATGTTTGCCTC 58.192 33.333 0.00 0.00 32.25 4.70
4704 5471 8.310382 TGCAACAACTAAAATATATGTTTGCCT 58.690 29.630 0.00 0.00 32.25 4.75
4717 5485 5.631512 GTCGCCAAATATGCAACAACTAAAA 59.368 36.000 0.00 0.00 0.00 1.52
4728 5496 1.810197 GACAACGTCGCCAAATATGC 58.190 50.000 0.00 0.00 0.00 3.14
4755 5546 4.503714 TGGTTGAAGAGGAAGAGTTGTT 57.496 40.909 0.00 0.00 0.00 2.83
4757 5548 5.123027 GCTTATGGTTGAAGAGGAAGAGTTG 59.877 44.000 0.00 0.00 0.00 3.16
4758 5549 5.013599 AGCTTATGGTTGAAGAGGAAGAGTT 59.986 40.000 0.00 0.00 0.00 3.01
4760 5551 5.096443 AGCTTATGGTTGAAGAGGAAGAG 57.904 43.478 0.00 0.00 0.00 2.85
4762 5553 5.096443 AGAGCTTATGGTTGAAGAGGAAG 57.904 43.478 0.00 0.00 0.00 3.46
4763 5554 4.780021 AGAGAGCTTATGGTTGAAGAGGAA 59.220 41.667 0.00 0.00 0.00 3.36
4793 5599 2.105006 AGCGAATTCTGCAGACATGT 57.895 45.000 18.03 0.00 33.85 3.21
4794 5600 4.808077 AATAGCGAATTCTGCAGACATG 57.192 40.909 18.03 7.97 33.85 3.21
4795 5601 4.877823 TGAAATAGCGAATTCTGCAGACAT 59.122 37.500 18.03 8.17 33.85 3.06
4798 5604 3.306973 CGTGAAATAGCGAATTCTGCAGA 59.693 43.478 13.74 13.74 33.85 4.26
4800 5606 2.351418 CCGTGAAATAGCGAATTCTGCA 59.649 45.455 19.45 9.55 33.85 4.41
4801 5607 2.286418 CCCGTGAAATAGCGAATTCTGC 60.286 50.000 12.44 12.44 0.00 4.26
4802 5608 2.936498 ACCCGTGAAATAGCGAATTCTG 59.064 45.455 3.52 0.00 0.00 3.02
4803 5609 3.261981 ACCCGTGAAATAGCGAATTCT 57.738 42.857 3.52 0.00 0.00 2.40
4805 5611 4.216687 TGAAAACCCGTGAAATAGCGAATT 59.783 37.500 0.00 0.00 0.00 2.17
4807 5613 3.139850 TGAAAACCCGTGAAATAGCGAA 58.860 40.909 0.00 0.00 0.00 4.70
4808 5614 2.739913 CTGAAAACCCGTGAAATAGCGA 59.260 45.455 0.00 0.00 0.00 4.93
4809 5615 2.482721 ACTGAAAACCCGTGAAATAGCG 59.517 45.455 0.00 0.00 0.00 4.26
4810 5616 4.499037 AACTGAAAACCCGTGAAATAGC 57.501 40.909 0.00 0.00 0.00 2.97
4811 5617 6.017440 TCTGAAACTGAAAACCCGTGAAATAG 60.017 38.462 0.00 0.00 0.00 1.73
4812 5618 5.823570 TCTGAAACTGAAAACCCGTGAAATA 59.176 36.000 0.00 0.00 0.00 1.40
4813 5619 4.642885 TCTGAAACTGAAAACCCGTGAAAT 59.357 37.500 0.00 0.00 0.00 2.17
4817 5673 3.563808 TCATCTGAAACTGAAAACCCGTG 59.436 43.478 0.00 0.00 0.00 4.94
4818 5674 3.815809 TCATCTGAAACTGAAAACCCGT 58.184 40.909 0.00 0.00 0.00 5.28
4820 5676 6.152379 GTCAATCATCTGAAACTGAAAACCC 58.848 40.000 0.00 0.00 0.00 4.11
4825 5681 4.043310 AGGGGTCAATCATCTGAAACTGAA 59.957 41.667 0.00 0.00 0.00 3.02
4828 5684 3.875369 GCAGGGGTCAATCATCTGAAACT 60.875 47.826 0.00 0.00 0.00 2.66
4865 5736 4.803426 GAGTCAGCGACAGGGCGG 62.803 72.222 10.52 0.00 38.18 6.13
4866 5737 2.842394 AATGAGTCAGCGACAGGGCG 62.842 60.000 0.00 0.00 38.18 6.13
4867 5738 1.078848 AATGAGTCAGCGACAGGGC 60.079 57.895 0.00 0.00 34.60 5.19
4870 5741 3.162202 AGATCAATGAGTCAGCGACAG 57.838 47.619 0.00 0.00 34.60 3.51
4877 5748 1.064463 GGGGCCAAGATCAATGAGTCA 60.064 52.381 4.39 0.00 0.00 3.41
4878 5749 1.064463 TGGGGCCAAGATCAATGAGTC 60.064 52.381 4.39 0.00 0.00 3.36
4879 5750 1.002069 TGGGGCCAAGATCAATGAGT 58.998 50.000 4.39 0.00 0.00 3.41
4881 5752 2.852714 AATGGGGCCAAGATCAATGA 57.147 45.000 4.39 0.00 0.00 2.57
4882 5753 2.629617 GGTAATGGGGCCAAGATCAATG 59.370 50.000 4.39 0.00 0.00 2.82
4883 5754 2.752829 CGGTAATGGGGCCAAGATCAAT 60.753 50.000 4.39 0.00 0.00 2.57
4885 5756 0.182537 CGGTAATGGGGCCAAGATCA 59.817 55.000 4.39 0.00 0.00 2.92
4886 5757 1.172812 GCGGTAATGGGGCCAAGATC 61.173 60.000 4.39 0.00 0.00 2.75
4888 5759 2.274104 GCGGTAATGGGGCCAAGA 59.726 61.111 4.39 0.00 0.00 3.02
4893 5764 3.138128 GTGTGGCGGTAATGGGGC 61.138 66.667 0.00 0.00 0.00 5.80
4895 5766 0.891449 TTGTGTGTGGCGGTAATGGG 60.891 55.000 0.00 0.00 0.00 4.00
4898 5769 1.975660 ACTTTGTGTGTGGCGGTAAT 58.024 45.000 0.00 0.00 0.00 1.89
4899 5770 2.102757 TCTACTTTGTGTGTGGCGGTAA 59.897 45.455 0.00 0.00 0.00 2.85
4900 5771 1.687660 TCTACTTTGTGTGTGGCGGTA 59.312 47.619 0.00 0.00 0.00 4.02
4901 5772 0.466543 TCTACTTTGTGTGTGGCGGT 59.533 50.000 0.00 0.00 0.00 5.68
4904 5775 3.625764 TGTTCTTCTACTTTGTGTGTGGC 59.374 43.478 0.00 0.00 0.00 5.01
4905 5776 5.049405 GGATGTTCTTCTACTTTGTGTGTGG 60.049 44.000 0.00 0.00 0.00 4.17
4906 5777 5.333339 CGGATGTTCTTCTACTTTGTGTGTG 60.333 44.000 0.00 0.00 0.00 3.82
4907 5778 4.750098 CGGATGTTCTTCTACTTTGTGTGT 59.250 41.667 0.00 0.00 0.00 3.72
4908 5779 4.988540 TCGGATGTTCTTCTACTTTGTGTG 59.011 41.667 0.00 0.00 0.00 3.82
4909 5780 5.209818 TCGGATGTTCTTCTACTTTGTGT 57.790 39.130 0.00 0.00 0.00 3.72
4910 5781 6.202954 ACTTTCGGATGTTCTTCTACTTTGTG 59.797 38.462 0.00 0.00 0.00 3.33
4911 5782 6.289064 ACTTTCGGATGTTCTTCTACTTTGT 58.711 36.000 0.00 0.00 0.00 2.83
4914 5785 6.097915 TGACTTTCGGATGTTCTTCTACTT 57.902 37.500 0.00 0.00 0.00 2.24
4915 5786 5.723672 TGACTTTCGGATGTTCTTCTACT 57.276 39.130 0.00 0.00 0.00 2.57
4916 5787 6.969828 ATTGACTTTCGGATGTTCTTCTAC 57.030 37.500 0.00 0.00 0.00 2.59
4920 5817 8.023128 CACAAATATTGACTTTCGGATGTTCTT 58.977 33.333 0.00 0.00 0.00 2.52
4934 5831 6.715344 TTGGTACGAGTCACAAATATTGAC 57.285 37.500 0.00 0.00 43.24 3.18
4974 5880 9.897744 CTGCTCAAAACAAGTCAATTTATTCTA 57.102 29.630 0.00 0.00 0.00 2.10
4975 5881 7.869429 CCTGCTCAAAACAAGTCAATTTATTCT 59.131 33.333 0.00 0.00 0.00 2.40
4976 5882 7.867403 TCCTGCTCAAAACAAGTCAATTTATTC 59.133 33.333 0.00 0.00 0.00 1.75
4985 7157 2.576615 ACCTCCTGCTCAAAACAAGTC 58.423 47.619 0.00 0.00 0.00 3.01
4987 7159 3.077359 CCTACCTCCTGCTCAAAACAAG 58.923 50.000 0.00 0.00 0.00 3.16
4991 7163 4.657814 ATTTCCTACCTCCTGCTCAAAA 57.342 40.909 0.00 0.00 0.00 2.44
4992 7164 4.657814 AATTTCCTACCTCCTGCTCAAA 57.342 40.909 0.00 0.00 0.00 2.69
5004 7176 7.490657 AAAGTTATTGGGGGAAATTTCCTAC 57.509 36.000 31.23 24.39 46.72 3.18
5019 7191 7.485913 GTCTGATACATGTGCCAAAAGTTATTG 59.514 37.037 9.11 0.00 0.00 1.90
5020 7192 7.176515 TGTCTGATACATGTGCCAAAAGTTATT 59.823 33.333 9.11 0.00 31.43 1.40
5021 7193 6.658816 TGTCTGATACATGTGCCAAAAGTTAT 59.341 34.615 9.11 0.00 31.43 1.89
5022 7194 6.000840 TGTCTGATACATGTGCCAAAAGTTA 58.999 36.000 9.11 0.00 31.43 2.24
5023 7195 4.826733 TGTCTGATACATGTGCCAAAAGTT 59.173 37.500 9.11 0.00 31.43 2.66
5024 7196 4.397420 TGTCTGATACATGTGCCAAAAGT 58.603 39.130 9.11 0.00 31.43 2.66
5025 7197 5.375417 TTGTCTGATACATGTGCCAAAAG 57.625 39.130 9.11 0.00 38.10 2.27
5026 7198 5.712004 CATTGTCTGATACATGTGCCAAAA 58.288 37.500 9.11 2.22 38.10 2.44
5027 7199 4.380761 GCATTGTCTGATACATGTGCCAAA 60.381 41.667 9.11 0.00 41.04 3.28
5028 7200 3.129113 GCATTGTCTGATACATGTGCCAA 59.871 43.478 9.11 2.72 41.04 4.52
5029 7201 2.684374 GCATTGTCTGATACATGTGCCA 59.316 45.455 9.11 5.23 41.04 4.92
5030 7202 3.344904 GCATTGTCTGATACATGTGCC 57.655 47.619 9.11 0.12 41.04 5.01
5031 7203 2.033801 GGGCATTGTCTGATACATGTGC 59.966 50.000 9.11 0.69 43.77 4.57
5078 7250 9.268282 TGGACTATATAAAGTGGTCTTCTCTTT 57.732 33.333 0.00 0.00 35.86 2.52
5079 7251 8.840200 TGGACTATATAAAGTGGTCTTCTCTT 57.160 34.615 0.00 0.00 32.90 2.85
5080 7252 8.697292 GTTGGACTATATAAAGTGGTCTTCTCT 58.303 37.037 0.00 0.00 32.90 3.10
5081 7253 8.475639 TGTTGGACTATATAAAGTGGTCTTCTC 58.524 37.037 0.00 0.00 32.90 2.87
5082 7254 8.375493 TGTTGGACTATATAAAGTGGTCTTCT 57.625 34.615 0.00 0.00 32.90 2.85
5083 7255 9.444600 TTTGTTGGACTATATAAAGTGGTCTTC 57.555 33.333 0.00 0.00 32.90 2.87
5084 7256 9.975218 ATTTGTTGGACTATATAAAGTGGTCTT 57.025 29.630 0.00 0.00 35.14 3.01
5085 7257 9.975218 AATTTGTTGGACTATATAAAGTGGTCT 57.025 29.630 0.00 0.00 0.00 3.85
5094 7266 9.555727 GTTGAGCCTAATTTGTTGGACTATATA 57.444 33.333 0.00 0.00 0.00 0.86
5095 7267 8.052748 TGTTGAGCCTAATTTGTTGGACTATAT 58.947 33.333 0.00 0.00 0.00 0.86
5096 7268 7.398829 TGTTGAGCCTAATTTGTTGGACTATA 58.601 34.615 0.00 0.00 0.00 1.31
5097 7269 6.245408 TGTTGAGCCTAATTTGTTGGACTAT 58.755 36.000 0.00 0.00 0.00 2.12
5098 7270 5.626142 TGTTGAGCCTAATTTGTTGGACTA 58.374 37.500 0.00 0.00 0.00 2.59
5099 7271 4.469657 TGTTGAGCCTAATTTGTTGGACT 58.530 39.130 0.00 0.00 0.00 3.85
5100 7272 4.846779 TGTTGAGCCTAATTTGTTGGAC 57.153 40.909 0.00 0.00 0.00 4.02
5101 7273 4.892934 AGTTGTTGAGCCTAATTTGTTGGA 59.107 37.500 0.00 0.00 0.00 3.53
5102 7274 5.200368 AGTTGTTGAGCCTAATTTGTTGG 57.800 39.130 0.00 0.00 0.00 3.77
5103 7275 5.830912 TGAGTTGTTGAGCCTAATTTGTTG 58.169 37.500 0.00 0.00 0.00 3.33
5104 7276 6.127479 TGTTGAGTTGTTGAGCCTAATTTGTT 60.127 34.615 0.00 0.00 0.00 2.83
5105 7277 5.359576 TGTTGAGTTGTTGAGCCTAATTTGT 59.640 36.000 0.00 0.00 0.00 2.83
5106 7278 5.830912 TGTTGAGTTGTTGAGCCTAATTTG 58.169 37.500 0.00 0.00 0.00 2.32
5107 7279 6.655078 ATGTTGAGTTGTTGAGCCTAATTT 57.345 33.333 0.00 0.00 0.00 1.82
5108 7280 6.714810 TGTATGTTGAGTTGTTGAGCCTAATT 59.285 34.615 0.00 0.00 0.00 1.40
5109 7281 6.237901 TGTATGTTGAGTTGTTGAGCCTAAT 58.762 36.000 0.00 0.00 0.00 1.73
5110 7282 5.616270 TGTATGTTGAGTTGTTGAGCCTAA 58.384 37.500 0.00 0.00 0.00 2.69
5111 7283 5.222079 TGTATGTTGAGTTGTTGAGCCTA 57.778 39.130 0.00 0.00 0.00 3.93
5112 7284 4.085357 TGTATGTTGAGTTGTTGAGCCT 57.915 40.909 0.00 0.00 0.00 4.58
5113 7285 4.216257 ACATGTATGTTGAGTTGTTGAGCC 59.784 41.667 0.00 0.00 37.90 4.70
5114 7286 5.362556 ACATGTATGTTGAGTTGTTGAGC 57.637 39.130 0.00 0.00 37.90 4.26
5115 7287 7.889589 TCTACATGTATGTTGAGTTGTTGAG 57.110 36.000 5.91 0.00 41.97 3.02
5116 7288 7.334171 CCATCTACATGTATGTTGAGTTGTTGA 59.666 37.037 5.91 0.00 43.56 3.18
5117 7289 7.466805 CCATCTACATGTATGTTGAGTTGTTG 58.533 38.462 5.91 7.33 43.56 3.33
5118 7290 6.094048 GCCATCTACATGTATGTTGAGTTGTT 59.906 38.462 5.91 0.00 43.56 2.83
5119 7291 5.586243 GCCATCTACATGTATGTTGAGTTGT 59.414 40.000 5.91 0.00 43.56 3.32
5120 7292 5.819379 AGCCATCTACATGTATGTTGAGTTG 59.181 40.000 5.91 8.41 43.56 3.16
5121 7293 5.994250 AGCCATCTACATGTATGTTGAGTT 58.006 37.500 5.91 0.00 43.56 3.01
5122 7294 5.620738 AGCCATCTACATGTATGTTGAGT 57.379 39.130 5.91 2.22 43.56 3.41
5123 7295 6.286758 AGAAGCCATCTACATGTATGTTGAG 58.713 40.000 5.91 0.00 43.56 3.02
5124 7296 6.239217 AGAAGCCATCTACATGTATGTTGA 57.761 37.500 5.91 10.63 44.21 3.18
5125 7297 6.932356 AAGAAGCCATCTACATGTATGTTG 57.068 37.500 5.91 4.66 41.97 3.33
5126 7298 7.944729 AAAAGAAGCCATCTACATGTATGTT 57.055 32.000 5.91 0.00 41.97 2.71
5127 7299 7.944729 AAAAAGAAGCCATCTACATGTATGT 57.055 32.000 5.91 2.75 44.48 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.