Multiple sequence alignment - TraesCS2B01G573200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G573200 chr2B 100.000 2503 0 0 494 2996 762958309 762955807 0.000000e+00 4623
1 TraesCS2B01G573200 chr2B 89.508 772 72 2 1412 2175 762805658 762804888 0.000000e+00 968
2 TraesCS2B01G573200 chr2B 79.817 1090 171 25 924 1996 763493414 763492357 0.000000e+00 749
3 TraesCS2B01G573200 chr2B 92.773 512 36 1 1596 2106 763334539 763334028 0.000000e+00 739
4 TraesCS2B01G573200 chr2B 79.207 1034 162 27 987 1997 763506332 763505329 0.000000e+00 669
5 TraesCS2B01G573200 chr2B 97.290 369 10 0 1682 2050 763628420 763628788 7.050000e-176 627
6 TraesCS2B01G573200 chr2B 85.294 442 38 12 917 1342 763334979 763334549 5.930000e-117 431
7 TraesCS2B01G573200 chr2B 90.253 277 25 2 917 1192 762811809 762811534 7.900000e-96 361
8 TraesCS2B01G573200 chr2B 100.000 161 0 0 1 161 762958802 762958642 6.280000e-77 298
9 TraesCS2B01G573200 chr2B 81.690 355 43 12 1189 1528 763628075 763628422 2.940000e-70 276
10 TraesCS2B01G573200 chr2B 82.353 187 15 6 1217 1385 762806169 762805983 2.410000e-31 147
11 TraesCS2B01G573200 chr2A 89.334 1322 103 15 917 2215 753405174 753403868 0.000000e+00 1626
12 TraesCS2B01G573200 chr2D 87.734 1337 113 19 917 2223 621590132 621588817 0.000000e+00 1513
13 TraesCS2B01G573200 chr2D 85.837 1285 109 26 960 2200 621841357 621842612 0.000000e+00 1297
14 TraesCS2B01G573200 chr2D 81.261 1094 161 21 925 1996 621671503 621670432 0.000000e+00 845
15 TraesCS2B01G573200 chr2D 80.438 777 118 14 995 1749 621755485 621754721 2.020000e-156 562
16 TraesCS2B01G573200 chr2D 88.889 180 14 1 2052 2225 621843578 621843757 1.810000e-52 217
17 TraesCS2B01G573200 chr2D 91.129 124 11 0 2175 2298 621842649 621842772 5.140000e-38 169
18 TraesCS2B01G573200 chr2D 87.121 132 9 2 2175 2298 621588803 621588672 3.110000e-30 143
19 TraesCS2B01G573200 chr5D 96.596 705 22 2 2292 2996 558623120 558622418 0.000000e+00 1168
20 TraesCS2B01G573200 chr5D 89.855 276 20 2 2031 2298 47628033 47627758 6.150000e-92 348
21 TraesCS2B01G573200 chr6D 96.429 700 23 2 2297 2996 106066773 106067470 0.000000e+00 1153
22 TraesCS2B01G573200 chr6D 95.590 703 23 4 2295 2996 359556339 359555644 0.000000e+00 1120
23 TraesCS2B01G573200 chr1D 96.429 700 20 5 2298 2996 437831866 437832561 0.000000e+00 1149
24 TraesCS2B01G573200 chr1D 88.406 138 10 1 2167 2298 489786910 489786773 8.590000e-36 161
25 TraesCS2B01G573200 chr4D 96.137 699 25 2 2298 2996 440040636 440041332 0.000000e+00 1140
26 TraesCS2B01G573200 chr4D 85.115 262 29 3 1966 2223 464676039 464676294 2.960000e-65 259
27 TraesCS2B01G573200 chr4D 89.683 126 12 1 2175 2299 464676308 464676433 3.090000e-35 159
28 TraesCS2B01G573200 chr3D 95.994 699 25 3 2298 2996 567484500 567483805 0.000000e+00 1133
29 TraesCS2B01G573200 chr3D 89.744 273 20 2 2031 2295 549644087 549644359 2.860000e-90 342
30 TraesCS2B01G573200 chr7B 95.272 698 30 3 2299 2996 92026943 92027637 0.000000e+00 1103
31 TraesCS2B01G573200 chr7B 83.030 165 28 0 1027 1191 690904478 690904642 1.860000e-32 150
32 TraesCS2B01G573200 chr1B 94.850 699 33 3 2298 2996 566722229 566722924 0.000000e+00 1088
33 TraesCS2B01G573200 chr1B 93.944 710 36 4 2288 2996 500424750 500424047 0.000000e+00 1066
34 TraesCS2B01G573200 chr3B 88.406 276 24 5 2031 2298 461746510 461746235 2.880000e-85 326
35 TraesCS2B01G573200 chr7A 96.875 64 2 0 2235 2298 217751600 217751537 1.140000e-19 108
36 TraesCS2B01G573200 chr5A 96.875 64 2 0 2235 2298 329388676 329388739 1.140000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G573200 chr2B 762955807 762958802 2995 True 2460.5 4623 100.000000 1 2996 2 chr2B.!!$R5 2995
1 TraesCS2B01G573200 chr2B 763492357 763493414 1057 True 749.0 749 79.817000 924 1996 1 chr2B.!!$R2 1072
2 TraesCS2B01G573200 chr2B 763505329 763506332 1003 True 669.0 669 79.207000 987 1997 1 chr2B.!!$R3 1010
3 TraesCS2B01G573200 chr2B 763334028 763334979 951 True 585.0 739 89.033500 917 2106 2 chr2B.!!$R6 1189
4 TraesCS2B01G573200 chr2B 762804888 762806169 1281 True 557.5 968 85.930500 1217 2175 2 chr2B.!!$R4 958
5 TraesCS2B01G573200 chr2B 763628075 763628788 713 False 451.5 627 89.490000 1189 2050 2 chr2B.!!$F1 861
6 TraesCS2B01G573200 chr2A 753403868 753405174 1306 True 1626.0 1626 89.334000 917 2215 1 chr2A.!!$R1 1298
7 TraesCS2B01G573200 chr2D 621670432 621671503 1071 True 845.0 845 81.261000 925 1996 1 chr2D.!!$R1 1071
8 TraesCS2B01G573200 chr2D 621588672 621590132 1460 True 828.0 1513 87.427500 917 2298 2 chr2D.!!$R3 1381
9 TraesCS2B01G573200 chr2D 621754721 621755485 764 True 562.0 562 80.438000 995 1749 1 chr2D.!!$R2 754
10 TraesCS2B01G573200 chr2D 621841357 621843757 2400 False 561.0 1297 88.618333 960 2298 3 chr2D.!!$F1 1338
11 TraesCS2B01G573200 chr5D 558622418 558623120 702 True 1168.0 1168 96.596000 2292 2996 1 chr5D.!!$R2 704
12 TraesCS2B01G573200 chr6D 106066773 106067470 697 False 1153.0 1153 96.429000 2297 2996 1 chr6D.!!$F1 699
13 TraesCS2B01G573200 chr6D 359555644 359556339 695 True 1120.0 1120 95.590000 2295 2996 1 chr6D.!!$R1 701
14 TraesCS2B01G573200 chr1D 437831866 437832561 695 False 1149.0 1149 96.429000 2298 2996 1 chr1D.!!$F1 698
15 TraesCS2B01G573200 chr4D 440040636 440041332 696 False 1140.0 1140 96.137000 2298 2996 1 chr4D.!!$F1 698
16 TraesCS2B01G573200 chr3D 567483805 567484500 695 True 1133.0 1133 95.994000 2298 2996 1 chr3D.!!$R1 698
17 TraesCS2B01G573200 chr7B 92026943 92027637 694 False 1103.0 1103 95.272000 2299 2996 1 chr7B.!!$F1 697
18 TraesCS2B01G573200 chr1B 566722229 566722924 695 False 1088.0 1088 94.850000 2298 2996 1 chr1B.!!$F1 698
19 TraesCS2B01G573200 chr1B 500424047 500424750 703 True 1066.0 1066 93.944000 2288 2996 1 chr1B.!!$R1 708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 625 0.034337 TTAGGTCGCTGTGTTGGGTC 59.966 55.0 0.00 0.00 0.0 4.46 F
691 692 0.035739 TTTGGAGTTGGCCCGACTAC 59.964 55.0 6.38 6.38 0.0 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1884 2267 0.107703 CGGCATCTAGACCCTTGCAA 60.108 55.0 15.91 0.0 36.82 4.08 R
2544 3017 0.823356 GTGTGCCCTGTCATGTTGGT 60.823 55.0 0.00 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.821589 GAGCACCCGGCCTCTTCG 62.822 72.222 0.00 0.00 46.50 3.79
19 20 3.766691 GCACCCGGCCTCTTCGTA 61.767 66.667 0.00 0.00 36.11 3.43
20 21 3.090219 GCACCCGGCCTCTTCGTAT 62.090 63.158 0.00 0.00 36.11 3.06
21 22 1.741327 GCACCCGGCCTCTTCGTATA 61.741 60.000 0.00 0.00 36.11 1.47
22 23 0.314302 CACCCGGCCTCTTCGTATAG 59.686 60.000 0.00 0.00 0.00 1.31
23 24 0.826672 ACCCGGCCTCTTCGTATAGG 60.827 60.000 0.00 0.00 35.86 2.57
24 25 0.538977 CCCGGCCTCTTCGTATAGGA 60.539 60.000 0.00 0.00 34.58 2.94
25 26 1.325355 CCGGCCTCTTCGTATAGGAA 58.675 55.000 0.00 7.59 34.58 3.36
26 27 1.269998 CCGGCCTCTTCGTATAGGAAG 59.730 57.143 23.30 23.30 43.78 3.46
27 28 1.336056 CGGCCTCTTCGTATAGGAAGC 60.336 57.143 24.11 16.23 42.48 3.86
28 29 1.687123 GGCCTCTTCGTATAGGAAGCA 59.313 52.381 24.11 14.83 42.48 3.91
29 30 2.288518 GGCCTCTTCGTATAGGAAGCAG 60.289 54.545 24.11 20.65 42.48 4.24
30 31 2.623889 GCCTCTTCGTATAGGAAGCAGA 59.376 50.000 24.11 11.28 42.48 4.26
31 32 3.551250 GCCTCTTCGTATAGGAAGCAGAC 60.551 52.174 24.11 14.04 42.48 3.51
32 33 3.004944 CCTCTTCGTATAGGAAGCAGACC 59.995 52.174 24.11 0.00 42.48 3.85
33 34 3.886505 CTCTTCGTATAGGAAGCAGACCT 59.113 47.826 24.11 0.00 42.48 3.85
34 35 5.045012 TCTTCGTATAGGAAGCAGACCTA 57.955 43.478 24.11 7.95 42.48 3.08
36 37 6.776744 TCTTCGTATAGGAAGCAGACCTATA 58.223 40.000 24.11 14.98 45.42 1.31
37 38 6.879993 TCTTCGTATAGGAAGCAGACCTATAG 59.120 42.308 24.11 11.47 46.78 1.31
38 39 6.370186 TCGTATAGGAAGCAGACCTATAGA 57.630 41.667 17.68 14.86 46.78 1.98
39 40 6.776744 TCGTATAGGAAGCAGACCTATAGAA 58.223 40.000 17.68 10.16 46.78 2.10
40 41 6.879993 TCGTATAGGAAGCAGACCTATAGAAG 59.120 42.308 17.68 13.78 46.78 2.85
41 42 5.993748 ATAGGAAGCAGACCTATAGAAGC 57.006 43.478 12.48 0.00 45.42 3.86
42 43 2.625790 AGGAAGCAGACCTATAGAAGCG 59.374 50.000 0.00 0.00 35.84 4.68
43 44 2.288518 GGAAGCAGACCTATAGAAGCGG 60.289 54.545 0.00 0.00 0.00 5.52
44 45 2.366640 AGCAGACCTATAGAAGCGGA 57.633 50.000 0.00 0.00 0.00 5.54
45 46 2.235016 AGCAGACCTATAGAAGCGGAG 58.765 52.381 0.00 0.00 0.00 4.63
46 47 2.158593 AGCAGACCTATAGAAGCGGAGA 60.159 50.000 0.00 0.00 0.00 3.71
47 48 2.823154 GCAGACCTATAGAAGCGGAGAT 59.177 50.000 0.00 0.00 0.00 2.75
48 49 4.011023 GCAGACCTATAGAAGCGGAGATA 58.989 47.826 0.00 0.00 0.00 1.98
49 50 4.459685 GCAGACCTATAGAAGCGGAGATAA 59.540 45.833 0.00 0.00 0.00 1.75
50 51 5.392595 GCAGACCTATAGAAGCGGAGATAAG 60.393 48.000 0.00 0.00 0.00 1.73
51 52 5.124776 CAGACCTATAGAAGCGGAGATAAGG 59.875 48.000 0.00 0.00 0.00 2.69
52 53 5.014333 AGACCTATAGAAGCGGAGATAAGGA 59.986 44.000 0.00 0.00 0.00 3.36
53 54 5.833340 ACCTATAGAAGCGGAGATAAGGAT 58.167 41.667 0.00 0.00 0.00 3.24
54 55 5.654650 ACCTATAGAAGCGGAGATAAGGATG 59.345 44.000 0.00 0.00 0.00 3.51
55 56 5.068460 CCTATAGAAGCGGAGATAAGGATGG 59.932 48.000 0.00 0.00 0.00 3.51
56 57 1.346068 AGAAGCGGAGATAAGGATGGC 59.654 52.381 0.00 0.00 0.00 4.40
57 58 0.398318 AAGCGGAGATAAGGATGGCC 59.602 55.000 0.00 0.00 0.00 5.36
58 59 1.374758 GCGGAGATAAGGATGGCCG 60.375 63.158 0.00 0.00 41.51 6.13
59 60 1.816863 GCGGAGATAAGGATGGCCGA 61.817 60.000 0.00 0.00 41.11 5.54
60 61 0.898320 CGGAGATAAGGATGGCCGAT 59.102 55.000 0.00 0.00 41.11 4.18
61 62 1.404717 CGGAGATAAGGATGGCCGATG 60.405 57.143 0.00 0.00 41.11 3.84
62 63 1.065854 GGAGATAAGGATGGCCGATGG 60.066 57.143 0.00 0.00 39.96 3.51
74 75 4.170062 CGATGGCCTTGCAGCGTG 62.170 66.667 3.32 0.00 0.00 5.34
75 76 2.747460 GATGGCCTTGCAGCGTGA 60.747 61.111 3.32 0.00 0.00 4.35
76 77 2.749044 ATGGCCTTGCAGCGTGAG 60.749 61.111 3.32 0.00 0.00 3.51
77 78 3.258228 ATGGCCTTGCAGCGTGAGA 62.258 57.895 3.32 0.00 0.00 3.27
78 79 3.426568 GGCCTTGCAGCGTGAGAC 61.427 66.667 0.00 0.00 0.00 3.36
79 80 3.782244 GCCTTGCAGCGTGAGACG 61.782 66.667 0.00 0.00 45.88 4.18
80 81 3.114616 CCTTGCAGCGTGAGACGG 61.115 66.667 0.00 0.00 42.82 4.79
81 82 2.049156 CTTGCAGCGTGAGACGGA 60.049 61.111 0.00 0.00 42.82 4.69
82 83 2.355837 TTGCAGCGTGAGACGGAC 60.356 61.111 0.00 0.00 42.82 4.79
83 84 4.700365 TGCAGCGTGAGACGGACG 62.700 66.667 0.00 0.00 42.82 4.79
86 87 4.039357 AGCGTGAGACGGACGGTG 62.039 66.667 0.00 0.00 45.20 4.94
87 88 4.338539 GCGTGAGACGGACGGTGT 62.339 66.667 0.00 0.00 42.82 4.16
88 89 2.333938 CGTGAGACGGACGGTGTT 59.666 61.111 0.00 0.00 38.08 3.32
89 90 2.014554 CGTGAGACGGACGGTGTTG 61.015 63.158 0.00 0.00 38.08 3.33
90 91 1.663702 GTGAGACGGACGGTGTTGG 60.664 63.158 0.00 0.00 0.00 3.77
91 92 2.048503 GAGACGGACGGTGTTGGG 60.049 66.667 0.00 0.00 0.00 4.12
92 93 3.584868 GAGACGGACGGTGTTGGGG 62.585 68.421 0.00 0.00 0.00 4.96
125 126 4.693525 CGGCGGCCGTGGTTTTTC 62.694 66.667 32.14 6.82 42.73 2.29
126 127 3.292159 GGCGGCCGTGGTTTTTCT 61.292 61.111 28.70 0.00 0.00 2.52
127 128 1.967494 GGCGGCCGTGGTTTTTCTA 60.967 57.895 28.70 0.00 0.00 2.10
128 129 1.500396 GCGGCCGTGGTTTTTCTAG 59.500 57.895 28.70 0.00 0.00 2.43
129 130 1.232621 GCGGCCGTGGTTTTTCTAGT 61.233 55.000 28.70 0.00 0.00 2.57
130 131 1.940752 GCGGCCGTGGTTTTTCTAGTA 60.941 52.381 28.70 0.00 0.00 1.82
131 132 1.728425 CGGCCGTGGTTTTTCTAGTAC 59.272 52.381 19.50 0.00 0.00 2.73
132 133 2.079158 GGCCGTGGTTTTTCTAGTACC 58.921 52.381 0.00 0.00 0.00 3.34
133 134 2.550639 GGCCGTGGTTTTTCTAGTACCA 60.551 50.000 0.00 0.00 39.53 3.25
134 135 2.740447 GCCGTGGTTTTTCTAGTACCAG 59.260 50.000 8.37 0.00 42.28 4.00
135 136 2.740447 CCGTGGTTTTTCTAGTACCAGC 59.260 50.000 8.37 4.86 42.28 4.85
136 137 2.410730 CGTGGTTTTTCTAGTACCAGCG 59.589 50.000 8.37 10.36 42.28 5.18
137 138 2.740447 GTGGTTTTTCTAGTACCAGCGG 59.260 50.000 8.37 0.00 42.28 5.52
138 139 1.736126 GGTTTTTCTAGTACCAGCGGC 59.264 52.381 0.00 0.00 32.12 6.53
139 140 1.392510 GTTTTTCTAGTACCAGCGGCG 59.607 52.381 0.51 0.51 0.00 6.46
140 141 0.889994 TTTTCTAGTACCAGCGGCGA 59.110 50.000 12.98 0.00 0.00 5.54
141 142 1.108776 TTTCTAGTACCAGCGGCGAT 58.891 50.000 12.98 0.00 0.00 4.58
142 143 0.384309 TTCTAGTACCAGCGGCGATG 59.616 55.000 19.62 19.62 0.00 3.84
143 144 0.464916 TCTAGTACCAGCGGCGATGA 60.465 55.000 28.43 4.18 0.00 2.92
144 145 0.039978 CTAGTACCAGCGGCGATGAG 60.040 60.000 28.43 18.61 0.00 2.90
145 146 0.464916 TAGTACCAGCGGCGATGAGA 60.465 55.000 28.43 10.99 0.00 3.27
146 147 1.141019 GTACCAGCGGCGATGAGAA 59.859 57.895 28.43 8.39 0.00 2.87
147 148 0.459585 GTACCAGCGGCGATGAGAAA 60.460 55.000 28.43 5.64 0.00 2.52
148 149 0.179111 TACCAGCGGCGATGAGAAAG 60.179 55.000 28.43 11.91 0.00 2.62
149 150 2.176273 CCAGCGGCGATGAGAAAGG 61.176 63.158 28.43 4.32 0.00 3.11
150 151 2.512515 AGCGGCGATGAGAAAGGC 60.513 61.111 12.98 0.00 0.00 4.35
151 152 3.577313 GCGGCGATGAGAAAGGCC 61.577 66.667 12.98 0.00 42.14 5.19
152 153 2.125147 CGGCGATGAGAAAGGCCA 60.125 61.111 5.01 0.00 45.85 5.36
153 154 2.464459 CGGCGATGAGAAAGGCCAC 61.464 63.158 5.01 0.00 45.85 5.01
154 155 1.377202 GGCGATGAGAAAGGCCACA 60.377 57.895 5.01 0.00 44.91 4.17
155 156 0.960364 GGCGATGAGAAAGGCCACAA 60.960 55.000 5.01 0.00 44.91 3.33
156 157 0.881118 GCGATGAGAAAGGCCACAAA 59.119 50.000 5.01 0.00 0.00 2.83
157 158 1.401539 GCGATGAGAAAGGCCACAAAC 60.402 52.381 5.01 0.00 0.00 2.93
158 159 1.879380 CGATGAGAAAGGCCACAAACA 59.121 47.619 5.01 0.00 0.00 2.83
159 160 2.350772 CGATGAGAAAGGCCACAAACAC 60.351 50.000 5.01 0.00 0.00 3.32
160 161 1.398692 TGAGAAAGGCCACAAACACC 58.601 50.000 5.01 0.00 0.00 4.16
511 512 4.256180 GGGGCCTGGGTAGCGATG 62.256 72.222 0.84 0.00 0.00 3.84
512 513 4.256180 GGGCCTGGGTAGCGATGG 62.256 72.222 0.84 0.00 0.00 3.51
513 514 3.161450 GGCCTGGGTAGCGATGGA 61.161 66.667 0.00 0.00 0.00 3.41
514 515 2.423446 GCCTGGGTAGCGATGGAG 59.577 66.667 0.00 0.00 0.00 3.86
515 516 2.423446 CCTGGGTAGCGATGGAGC 59.577 66.667 0.00 0.00 37.41 4.70
516 517 2.028190 CTGGGTAGCGATGGAGCG 59.972 66.667 0.00 0.00 43.00 5.03
517 518 3.506059 CTGGGTAGCGATGGAGCGG 62.506 68.421 0.00 0.00 43.00 5.52
518 519 4.301027 GGGTAGCGATGGAGCGGG 62.301 72.222 0.00 0.00 43.00 6.13
519 520 4.971125 GGTAGCGATGGAGCGGGC 62.971 72.222 0.00 0.00 43.00 6.13
524 525 2.817834 CGATGGAGCGGGCGAAAA 60.818 61.111 0.00 0.00 0.00 2.29
525 526 2.395360 CGATGGAGCGGGCGAAAAA 61.395 57.895 0.00 0.00 0.00 1.94
526 527 1.714899 CGATGGAGCGGGCGAAAAAT 61.715 55.000 0.00 0.00 0.00 1.82
527 528 0.248621 GATGGAGCGGGCGAAAAATG 60.249 55.000 0.00 0.00 0.00 2.32
528 529 1.666209 ATGGAGCGGGCGAAAAATGG 61.666 55.000 0.00 0.00 0.00 3.16
529 530 2.202610 GAGCGGGCGAAAAATGGC 60.203 61.111 0.00 0.00 0.00 4.40
530 531 2.676471 AGCGGGCGAAAAATGGCT 60.676 55.556 0.00 0.00 0.00 4.75
531 532 2.506881 GCGGGCGAAAAATGGCTG 60.507 61.111 0.00 0.00 40.95 4.85
532 533 2.506881 CGGGCGAAAAATGGCTGC 60.507 61.111 0.00 0.00 0.00 5.25
533 534 2.506881 GGGCGAAAAATGGCTGCG 60.507 61.111 0.00 0.00 0.00 5.18
534 535 3.181290 GGCGAAAAATGGCTGCGC 61.181 61.111 0.00 0.00 46.20 6.09
535 536 2.430582 GCGAAAAATGGCTGCGCA 60.431 55.556 10.98 10.98 46.19 6.09
536 537 2.438954 GCGAAAAATGGCTGCGCAG 61.439 57.895 32.83 32.83 46.19 5.18
537 538 1.209898 CGAAAAATGGCTGCGCAGA 59.790 52.632 40.21 21.71 0.00 4.26
538 539 0.179156 CGAAAAATGGCTGCGCAGAT 60.179 50.000 40.21 23.05 0.00 2.90
539 540 1.063912 CGAAAAATGGCTGCGCAGATA 59.936 47.619 40.21 26.79 0.00 1.98
540 541 2.454055 GAAAAATGGCTGCGCAGATAC 58.546 47.619 40.21 27.22 0.00 2.24
541 542 1.462616 AAAATGGCTGCGCAGATACA 58.537 45.000 40.21 31.44 0.00 2.29
542 543 1.462616 AAATGGCTGCGCAGATACAA 58.537 45.000 40.21 17.38 0.00 2.41
543 544 1.462616 AATGGCTGCGCAGATACAAA 58.537 45.000 40.21 17.70 0.00 2.83
544 545 0.734889 ATGGCTGCGCAGATACAAAC 59.265 50.000 40.21 20.12 0.00 2.93
545 546 1.305219 TGGCTGCGCAGATACAAACC 61.305 55.000 40.21 27.83 0.00 3.27
546 547 1.305219 GGCTGCGCAGATACAAACCA 61.305 55.000 40.21 0.00 0.00 3.67
547 548 0.734889 GCTGCGCAGATACAAACCAT 59.265 50.000 40.21 0.00 0.00 3.55
548 549 1.532505 GCTGCGCAGATACAAACCATG 60.533 52.381 40.21 10.97 0.00 3.66
549 550 0.451383 TGCGCAGATACAAACCATGC 59.549 50.000 5.66 0.00 0.00 4.06
550 551 0.248621 GCGCAGATACAAACCATGCC 60.249 55.000 0.30 0.00 33.32 4.40
551 552 0.381801 CGCAGATACAAACCATGCCC 59.618 55.000 0.00 0.00 33.32 5.36
552 553 1.473258 GCAGATACAAACCATGCCCA 58.527 50.000 0.00 0.00 0.00 5.36
553 554 1.824230 GCAGATACAAACCATGCCCAA 59.176 47.619 0.00 0.00 0.00 4.12
554 555 2.233431 GCAGATACAAACCATGCCCAAA 59.767 45.455 0.00 0.00 0.00 3.28
555 556 3.118665 GCAGATACAAACCATGCCCAAAT 60.119 43.478 0.00 0.00 0.00 2.32
556 557 4.623647 GCAGATACAAACCATGCCCAAATT 60.624 41.667 0.00 0.00 0.00 1.82
557 558 5.490159 CAGATACAAACCATGCCCAAATTT 58.510 37.500 0.00 0.00 0.00 1.82
558 559 5.352016 CAGATACAAACCATGCCCAAATTTG 59.648 40.000 11.40 11.40 36.54 2.32
559 560 3.853355 ACAAACCATGCCCAAATTTGA 57.147 38.095 19.86 0.00 34.93 2.69
560 561 3.742385 ACAAACCATGCCCAAATTTGAG 58.258 40.909 19.86 7.62 34.93 3.02
561 562 2.477845 AACCATGCCCAAATTTGAGC 57.522 45.000 19.86 18.37 31.98 4.26
562 563 1.350071 ACCATGCCCAAATTTGAGCA 58.650 45.000 26.65 26.65 45.93 4.26
563 564 1.276989 ACCATGCCCAAATTTGAGCAG 59.723 47.619 27.80 19.21 45.09 4.24
564 565 1.551430 CCATGCCCAAATTTGAGCAGA 59.449 47.619 27.80 9.92 45.09 4.26
565 566 2.027929 CCATGCCCAAATTTGAGCAGAA 60.028 45.455 27.80 9.24 45.09 3.02
566 567 3.557475 CCATGCCCAAATTTGAGCAGAAA 60.557 43.478 27.80 8.90 45.09 2.52
567 568 3.834489 TGCCCAAATTTGAGCAGAAAA 57.166 38.095 21.84 0.50 36.98 2.29
568 569 4.354893 TGCCCAAATTTGAGCAGAAAAT 57.645 36.364 21.84 0.00 36.98 1.82
569 570 4.066490 TGCCCAAATTTGAGCAGAAAATG 58.934 39.130 21.84 0.56 36.98 2.32
570 571 3.437741 GCCCAAATTTGAGCAGAAAATGG 59.562 43.478 18.66 8.73 31.63 3.16
571 572 4.004982 CCCAAATTTGAGCAGAAAATGGG 58.995 43.478 19.86 14.81 38.58 4.00
572 573 4.505390 CCCAAATTTGAGCAGAAAATGGGT 60.505 41.667 19.86 0.00 39.24 4.51
573 574 4.692155 CCAAATTTGAGCAGAAAATGGGTC 59.308 41.667 19.86 0.00 0.00 4.46
574 575 5.299148 CAAATTTGAGCAGAAAATGGGTCA 58.701 37.500 13.08 0.00 39.52 4.02
575 576 5.750352 AATTTGAGCAGAAAATGGGTCAT 57.250 34.783 0.00 0.00 40.74 3.06
576 577 6.855763 AATTTGAGCAGAAAATGGGTCATA 57.144 33.333 0.00 0.00 40.74 2.15
577 578 5.902613 TTTGAGCAGAAAATGGGTCATAG 57.097 39.130 0.00 0.00 40.74 2.23
578 579 3.889815 TGAGCAGAAAATGGGTCATAGG 58.110 45.455 0.00 0.00 36.68 2.57
579 580 2.620585 GAGCAGAAAATGGGTCATAGGC 59.379 50.000 0.00 0.00 0.00 3.93
580 581 1.334869 GCAGAAAATGGGTCATAGGCG 59.665 52.381 0.00 0.00 0.00 5.52
581 582 1.949525 CAGAAAATGGGTCATAGGCGG 59.050 52.381 0.00 0.00 0.00 6.13
582 583 1.843851 AGAAAATGGGTCATAGGCGGA 59.156 47.619 0.00 0.00 0.00 5.54
583 584 2.443255 AGAAAATGGGTCATAGGCGGAT 59.557 45.455 0.00 0.00 0.00 4.18
584 585 3.650942 AGAAAATGGGTCATAGGCGGATA 59.349 43.478 0.00 0.00 0.00 2.59
585 586 4.104102 AGAAAATGGGTCATAGGCGGATAA 59.896 41.667 0.00 0.00 0.00 1.75
586 587 4.447138 AAATGGGTCATAGGCGGATAAA 57.553 40.909 0.00 0.00 0.00 1.40
587 588 4.447138 AATGGGTCATAGGCGGATAAAA 57.553 40.909 0.00 0.00 0.00 1.52
588 589 3.935818 TGGGTCATAGGCGGATAAAAA 57.064 42.857 0.00 0.00 0.00 1.94
604 605 1.375551 AAAAACGAACGCCTGTCTGT 58.624 45.000 0.00 0.00 0.00 3.41
605 606 1.375551 AAAACGAACGCCTGTCTGTT 58.624 45.000 0.00 0.00 0.00 3.16
606 607 1.375551 AAACGAACGCCTGTCTGTTT 58.624 45.000 0.00 0.00 33.23 2.83
607 608 2.228138 AACGAACGCCTGTCTGTTTA 57.772 45.000 0.00 0.00 0.00 2.01
608 609 1.779569 ACGAACGCCTGTCTGTTTAG 58.220 50.000 0.00 0.00 0.00 1.85
609 610 1.068474 CGAACGCCTGTCTGTTTAGG 58.932 55.000 0.00 0.00 37.14 2.69
610 611 1.604693 CGAACGCCTGTCTGTTTAGGT 60.605 52.381 0.00 0.00 36.44 3.08
611 612 2.067013 GAACGCCTGTCTGTTTAGGTC 58.933 52.381 0.00 0.00 36.44 3.85
612 613 0.038526 ACGCCTGTCTGTTTAGGTCG 60.039 55.000 0.00 0.00 38.58 4.79
613 614 1.352156 CGCCTGTCTGTTTAGGTCGC 61.352 60.000 0.00 0.00 36.44 5.19
614 615 0.037232 GCCTGTCTGTTTAGGTCGCT 60.037 55.000 0.00 0.00 36.44 4.93
615 616 1.714794 CCTGTCTGTTTAGGTCGCTG 58.285 55.000 0.00 0.00 0.00 5.18
616 617 1.000955 CCTGTCTGTTTAGGTCGCTGT 59.999 52.381 0.00 0.00 0.00 4.40
617 618 2.061773 CTGTCTGTTTAGGTCGCTGTG 58.938 52.381 0.00 0.00 0.00 3.66
618 619 1.411246 TGTCTGTTTAGGTCGCTGTGT 59.589 47.619 0.00 0.00 0.00 3.72
619 620 2.159014 TGTCTGTTTAGGTCGCTGTGTT 60.159 45.455 0.00 0.00 0.00 3.32
620 621 2.221055 GTCTGTTTAGGTCGCTGTGTTG 59.779 50.000 0.00 0.00 0.00 3.33
621 622 1.531149 CTGTTTAGGTCGCTGTGTTGG 59.469 52.381 0.00 0.00 0.00 3.77
622 623 0.872388 GTTTAGGTCGCTGTGTTGGG 59.128 55.000 0.00 0.00 0.00 4.12
623 624 0.470766 TTTAGGTCGCTGTGTTGGGT 59.529 50.000 0.00 0.00 0.00 4.51
624 625 0.034337 TTAGGTCGCTGTGTTGGGTC 59.966 55.000 0.00 0.00 0.00 4.46
625 626 1.116536 TAGGTCGCTGTGTTGGGTCA 61.117 55.000 0.00 0.00 0.00 4.02
626 627 1.302511 GGTCGCTGTGTTGGGTCAT 60.303 57.895 0.00 0.00 0.00 3.06
627 628 1.577328 GGTCGCTGTGTTGGGTCATG 61.577 60.000 0.00 0.00 0.00 3.07
628 629 0.602638 GTCGCTGTGTTGGGTCATGA 60.603 55.000 0.00 0.00 0.00 3.07
629 630 0.324614 TCGCTGTGTTGGGTCATGAT 59.675 50.000 0.00 0.00 0.00 2.45
630 631 1.167851 CGCTGTGTTGGGTCATGATT 58.832 50.000 0.00 0.00 0.00 2.57
631 632 1.541147 CGCTGTGTTGGGTCATGATTT 59.459 47.619 0.00 0.00 0.00 2.17
632 633 2.669113 CGCTGTGTTGGGTCATGATTTG 60.669 50.000 0.00 0.00 0.00 2.32
633 634 2.297033 GCTGTGTTGGGTCATGATTTGT 59.703 45.455 0.00 0.00 0.00 2.83
634 635 3.858129 GCTGTGTTGGGTCATGATTTGTG 60.858 47.826 0.00 0.00 0.00 3.33
635 636 3.295093 TGTGTTGGGTCATGATTTGTGT 58.705 40.909 0.00 0.00 0.00 3.72
636 637 3.317711 TGTGTTGGGTCATGATTTGTGTC 59.682 43.478 0.00 0.00 0.00 3.67
637 638 2.551887 TGTTGGGTCATGATTTGTGTCG 59.448 45.455 0.00 0.00 0.00 4.35
638 639 2.811431 GTTGGGTCATGATTTGTGTCGA 59.189 45.455 0.00 0.00 0.00 4.20
639 640 3.348647 TGGGTCATGATTTGTGTCGAT 57.651 42.857 0.00 0.00 0.00 3.59
640 641 3.684908 TGGGTCATGATTTGTGTCGATT 58.315 40.909 0.00 0.00 0.00 3.34
641 642 3.689161 TGGGTCATGATTTGTGTCGATTC 59.311 43.478 0.00 0.00 0.00 2.52
642 643 3.242413 GGGTCATGATTTGTGTCGATTCG 60.242 47.826 0.00 0.00 0.00 3.34
643 644 3.616821 GGTCATGATTTGTGTCGATTCGA 59.383 43.478 4.29 4.29 0.00 3.71
644 645 4.259970 GGTCATGATTTGTGTCGATTCGAG 60.260 45.833 9.42 0.00 36.23 4.04
645 646 3.865164 TCATGATTTGTGTCGATTCGAGG 59.135 43.478 9.42 0.00 36.23 4.63
646 647 3.586100 TGATTTGTGTCGATTCGAGGA 57.414 42.857 9.42 0.00 36.23 3.71
647 648 4.123497 TGATTTGTGTCGATTCGAGGAT 57.877 40.909 9.42 0.00 36.23 3.24
648 649 5.257082 TGATTTGTGTCGATTCGAGGATA 57.743 39.130 9.42 0.00 36.23 2.59
649 650 5.281727 TGATTTGTGTCGATTCGAGGATAG 58.718 41.667 9.42 0.00 36.23 2.08
650 651 3.710326 TTGTGTCGATTCGAGGATAGG 57.290 47.619 9.42 0.00 36.23 2.57
651 652 2.927028 TGTGTCGATTCGAGGATAGGA 58.073 47.619 9.42 0.00 36.23 2.94
652 653 3.487372 TGTGTCGATTCGAGGATAGGAT 58.513 45.455 9.42 0.00 36.23 3.24
653 654 3.253432 TGTGTCGATTCGAGGATAGGATG 59.747 47.826 9.42 0.00 36.23 3.51
654 655 2.820197 TGTCGATTCGAGGATAGGATGG 59.180 50.000 9.42 0.00 36.23 3.51
655 656 3.082548 GTCGATTCGAGGATAGGATGGA 58.917 50.000 9.42 0.00 36.23 3.41
656 657 3.082548 TCGATTCGAGGATAGGATGGAC 58.917 50.000 4.29 0.00 0.00 4.02
657 658 2.164624 CGATTCGAGGATAGGATGGACC 59.835 54.545 0.00 0.00 39.35 4.46
658 659 2.767644 TTCGAGGATAGGATGGACCA 57.232 50.000 0.00 0.00 42.04 4.02
659 660 2.767644 TCGAGGATAGGATGGACCAA 57.232 50.000 0.00 0.00 42.04 3.67
660 661 3.040655 TCGAGGATAGGATGGACCAAA 57.959 47.619 0.00 0.00 42.04 3.28
661 662 3.587498 TCGAGGATAGGATGGACCAAAT 58.413 45.455 0.00 0.00 42.04 2.32
662 663 4.747583 TCGAGGATAGGATGGACCAAATA 58.252 43.478 0.00 0.00 42.04 1.40
663 664 5.342017 TCGAGGATAGGATGGACCAAATAT 58.658 41.667 0.00 0.00 42.04 1.28
664 665 5.187772 TCGAGGATAGGATGGACCAAATATG 59.812 44.000 0.00 0.00 42.04 1.78
676 677 3.149436 CCAAATATGGTCGTGCTTTGG 57.851 47.619 0.00 0.00 42.18 3.28
677 678 2.752354 CCAAATATGGTCGTGCTTTGGA 59.248 45.455 6.52 0.00 45.56 3.53
678 679 3.181497 CCAAATATGGTCGTGCTTTGGAG 60.181 47.826 6.52 0.00 45.56 3.86
679 680 3.350219 AATATGGTCGTGCTTTGGAGT 57.650 42.857 0.00 0.00 0.00 3.85
680 681 2.851263 TATGGTCGTGCTTTGGAGTT 57.149 45.000 0.00 0.00 0.00 3.01
681 682 1.238439 ATGGTCGTGCTTTGGAGTTG 58.762 50.000 0.00 0.00 0.00 3.16
682 683 0.817634 TGGTCGTGCTTTGGAGTTGG 60.818 55.000 0.00 0.00 0.00 3.77
683 684 1.282875 GTCGTGCTTTGGAGTTGGC 59.717 57.895 0.00 0.00 0.00 4.52
684 685 1.896660 TCGTGCTTTGGAGTTGGCC 60.897 57.895 0.00 0.00 0.00 5.36
685 686 2.919494 CGTGCTTTGGAGTTGGCCC 61.919 63.158 0.00 0.00 0.00 5.80
686 687 2.597217 TGCTTTGGAGTTGGCCCG 60.597 61.111 0.00 0.00 0.00 6.13
687 688 2.282180 GCTTTGGAGTTGGCCCGA 60.282 61.111 0.00 0.00 0.00 5.14
688 689 2.626780 GCTTTGGAGTTGGCCCGAC 61.627 63.158 0.00 0.00 0.00 4.79
689 690 1.073199 CTTTGGAGTTGGCCCGACT 59.927 57.895 2.32 2.32 0.00 4.18
690 691 0.323629 CTTTGGAGTTGGCCCGACTA 59.676 55.000 2.82 0.00 0.00 2.59
691 692 0.035739 TTTGGAGTTGGCCCGACTAC 59.964 55.000 6.38 6.38 0.00 2.73
692 693 1.833787 TTGGAGTTGGCCCGACTACC 61.834 60.000 11.07 10.99 27.71 3.18
693 694 2.582978 GAGTTGGCCCGACTACCC 59.417 66.667 2.82 0.00 0.00 3.69
694 695 3.007323 AGTTGGCCCGACTACCCC 61.007 66.667 0.31 0.00 0.00 4.95
695 696 3.324108 GTTGGCCCGACTACCCCA 61.324 66.667 0.00 0.00 0.00 4.96
696 697 2.529643 TTGGCCCGACTACCCCAA 60.530 61.111 0.00 0.00 35.14 4.12
697 698 2.897762 TTGGCCCGACTACCCCAAC 61.898 63.158 0.00 0.00 32.73 3.77
698 699 4.105553 GGCCCGACTACCCCAACC 62.106 72.222 0.00 0.00 0.00 3.77
699 700 3.324108 GCCCGACTACCCCAACCA 61.324 66.667 0.00 0.00 0.00 3.67
700 701 2.676265 GCCCGACTACCCCAACCAT 61.676 63.158 0.00 0.00 0.00 3.55
701 702 1.339644 GCCCGACTACCCCAACCATA 61.340 60.000 0.00 0.00 0.00 2.74
702 703 0.756903 CCCGACTACCCCAACCATAG 59.243 60.000 0.00 0.00 0.00 2.23
703 704 0.756903 CCGACTACCCCAACCATAGG 59.243 60.000 0.00 0.00 0.00 2.57
704 705 0.106149 CGACTACCCCAACCATAGGC 59.894 60.000 0.00 0.00 0.00 3.93
705 706 0.472898 GACTACCCCAACCATAGGCC 59.527 60.000 0.00 0.00 0.00 5.19
706 707 0.253441 ACTACCCCAACCATAGGCCA 60.253 55.000 5.01 0.00 0.00 5.36
707 708 0.474184 CTACCCCAACCATAGGCCAG 59.526 60.000 5.01 0.00 0.00 4.85
708 709 0.045008 TACCCCAACCATAGGCCAGA 59.955 55.000 5.01 0.00 0.00 3.86
709 710 0.849094 ACCCCAACCATAGGCCAGAA 60.849 55.000 5.01 0.00 0.00 3.02
710 711 0.334676 CCCCAACCATAGGCCAGAAA 59.665 55.000 5.01 0.00 0.00 2.52
711 712 1.062962 CCCCAACCATAGGCCAGAAAT 60.063 52.381 5.01 0.00 0.00 2.17
712 713 2.176798 CCCCAACCATAGGCCAGAAATA 59.823 50.000 5.01 0.00 0.00 1.40
713 714 3.181418 CCCCAACCATAGGCCAGAAATAT 60.181 47.826 5.01 0.00 0.00 1.28
714 715 4.082125 CCCAACCATAGGCCAGAAATATC 58.918 47.826 5.01 0.00 0.00 1.63
715 716 4.082125 CCAACCATAGGCCAGAAATATCC 58.918 47.826 5.01 0.00 0.00 2.59
716 717 4.082125 CAACCATAGGCCAGAAATATCCC 58.918 47.826 5.01 0.00 0.00 3.85
717 718 3.335748 ACCATAGGCCAGAAATATCCCA 58.664 45.455 5.01 0.00 0.00 4.37
718 719 3.925370 ACCATAGGCCAGAAATATCCCAT 59.075 43.478 5.01 0.00 0.00 4.00
719 720 4.018050 ACCATAGGCCAGAAATATCCCATC 60.018 45.833 5.01 0.00 0.00 3.51
720 721 4.229123 CCATAGGCCAGAAATATCCCATCT 59.771 45.833 5.01 0.00 0.00 2.90
721 722 5.281401 CCATAGGCCAGAAATATCCCATCTT 60.281 44.000 5.01 0.00 0.00 2.40
722 723 4.821532 AGGCCAGAAATATCCCATCTTT 57.178 40.909 5.01 0.00 0.00 2.52
723 724 5.930209 AGGCCAGAAATATCCCATCTTTA 57.070 39.130 5.01 0.00 0.00 1.85
724 725 5.635120 AGGCCAGAAATATCCCATCTTTAC 58.365 41.667 5.01 0.00 0.00 2.01
725 726 5.134339 AGGCCAGAAATATCCCATCTTTACA 59.866 40.000 5.01 0.00 0.00 2.41
726 727 5.833131 GGCCAGAAATATCCCATCTTTACAA 59.167 40.000 0.00 0.00 0.00 2.41
727 728 6.494835 GGCCAGAAATATCCCATCTTTACAAT 59.505 38.462 0.00 0.00 0.00 2.71
728 729 7.373493 GCCAGAAATATCCCATCTTTACAATG 58.627 38.462 0.00 0.00 0.00 2.82
729 730 7.524367 GCCAGAAATATCCCATCTTTACAATGG 60.524 40.741 0.00 0.00 42.84 3.16
768 769 7.181143 GATAAATATCCAACGGCTAAAACGA 57.819 36.000 0.00 0.00 34.93 3.85
769 770 7.739498 ATAAATATCCAACGGCTAAAACGAT 57.261 32.000 0.00 0.00 34.93 3.73
770 771 6.445357 AAATATCCAACGGCTAAAACGATT 57.555 33.333 0.00 0.00 34.93 3.34
771 772 5.668558 ATATCCAACGGCTAAAACGATTC 57.331 39.130 0.00 0.00 34.93 2.52
772 773 1.727880 TCCAACGGCTAAAACGATTCG 59.272 47.619 4.14 4.14 34.93 3.34
773 774 1.727880 CCAACGGCTAAAACGATTCGA 59.272 47.619 13.95 0.00 34.93 3.71
774 775 2.222729 CCAACGGCTAAAACGATTCGAG 60.223 50.000 13.95 0.34 34.93 4.04
775 776 0.997196 ACGGCTAAAACGATTCGAGC 59.003 50.000 13.95 10.78 34.93 5.03
776 777 0.044161 CGGCTAAAACGATTCGAGCG 60.044 55.000 13.95 8.02 33.85 5.03
777 778 0.315140 GGCTAAAACGATTCGAGCGC 60.315 55.000 13.95 0.00 33.85 5.92
778 779 0.645868 GCTAAAACGATTCGAGCGCT 59.354 50.000 11.27 11.27 0.00 5.92
779 780 1.850441 GCTAAAACGATTCGAGCGCTA 59.150 47.619 11.50 0.00 0.00 4.26
780 781 2.280708 GCTAAAACGATTCGAGCGCTAA 59.719 45.455 11.50 1.23 0.00 3.09
781 782 3.599563 GCTAAAACGATTCGAGCGCTAAG 60.600 47.826 11.50 8.18 0.00 2.18
782 783 2.273370 AAACGATTCGAGCGCTAAGA 57.727 45.000 11.50 10.93 0.00 2.10
783 784 2.493713 AACGATTCGAGCGCTAAGAT 57.506 45.000 11.50 3.90 0.00 2.40
784 785 1.759994 ACGATTCGAGCGCTAAGATG 58.240 50.000 11.50 8.81 0.00 2.90
785 786 1.056103 CGATTCGAGCGCTAAGATGG 58.944 55.000 11.50 1.69 0.00 3.51
786 787 1.423395 GATTCGAGCGCTAAGATGGG 58.577 55.000 11.50 0.00 0.00 4.00
787 788 1.000163 GATTCGAGCGCTAAGATGGGA 60.000 52.381 11.50 0.00 0.00 4.37
788 789 0.102481 TTCGAGCGCTAAGATGGGAC 59.898 55.000 11.50 0.00 0.00 4.46
789 790 1.658717 CGAGCGCTAAGATGGGACG 60.659 63.158 11.50 1.58 0.00 4.79
790 791 1.300233 GAGCGCTAAGATGGGACGG 60.300 63.158 11.50 0.00 0.00 4.79
791 792 2.967615 GCGCTAAGATGGGACGGC 60.968 66.667 0.00 0.00 0.00 5.68
792 793 2.280186 CGCTAAGATGGGACGGCC 60.280 66.667 0.00 0.00 0.00 6.13
793 794 2.280186 GCTAAGATGGGACGGCCG 60.280 66.667 26.86 26.86 33.83 6.13
794 795 2.792947 GCTAAGATGGGACGGCCGA 61.793 63.158 35.90 10.13 33.83 5.54
795 796 1.820581 CTAAGATGGGACGGCCGAA 59.179 57.895 35.90 14.80 33.83 4.30
796 797 0.177141 CTAAGATGGGACGGCCGAAA 59.823 55.000 35.90 14.40 33.83 3.46
797 798 0.614294 TAAGATGGGACGGCCGAAAA 59.386 50.000 35.90 14.79 33.83 2.29
798 799 0.958876 AAGATGGGACGGCCGAAAAC 60.959 55.000 35.90 18.87 33.83 2.43
799 800 2.744709 ATGGGACGGCCGAAAACG 60.745 61.111 35.90 3.66 33.83 3.60
800 801 3.242897 ATGGGACGGCCGAAAACGA 62.243 57.895 35.90 15.74 33.83 3.85
801 802 3.417224 GGGACGGCCGAAAACGAC 61.417 66.667 35.90 12.64 33.83 4.34
802 803 2.356673 GGACGGCCGAAAACGACT 60.357 61.111 35.90 6.14 0.00 4.18
803 804 2.378084 GGACGGCCGAAAACGACTC 61.378 63.158 35.90 16.32 0.00 3.36
804 805 1.662446 GACGGCCGAAAACGACTCA 60.662 57.895 35.90 0.00 0.00 3.41
805 806 1.883725 GACGGCCGAAAACGACTCAC 61.884 60.000 35.90 4.01 0.00 3.51
806 807 1.663702 CGGCCGAAAACGACTCACT 60.664 57.895 24.07 0.00 0.00 3.41
807 808 0.387622 CGGCCGAAAACGACTCACTA 60.388 55.000 24.07 0.00 0.00 2.74
808 809 1.734707 CGGCCGAAAACGACTCACTAT 60.735 52.381 24.07 0.00 0.00 2.12
809 810 1.659098 GGCCGAAAACGACTCACTATG 59.341 52.381 0.00 0.00 0.00 2.23
810 811 1.659098 GCCGAAAACGACTCACTATGG 59.341 52.381 0.00 0.00 0.00 2.74
811 812 2.268298 CCGAAAACGACTCACTATGGG 58.732 52.381 0.00 0.00 0.00 4.00
812 813 2.353406 CCGAAAACGACTCACTATGGGT 60.353 50.000 0.00 0.00 30.71 4.51
813 814 3.323243 CGAAAACGACTCACTATGGGTT 58.677 45.455 0.00 0.00 26.09 4.11
814 815 3.744426 CGAAAACGACTCACTATGGGTTT 59.256 43.478 0.00 0.00 26.09 3.27
815 816 4.212636 CGAAAACGACTCACTATGGGTTTT 59.787 41.667 0.00 0.00 39.47 2.43
816 817 5.277634 CGAAAACGACTCACTATGGGTTTTT 60.278 40.000 0.00 0.00 37.61 1.94
844 845 1.952296 CCACTATGGGATTTGAGCAGC 59.048 52.381 0.00 0.00 32.67 5.25
845 846 2.422519 CCACTATGGGATTTGAGCAGCT 60.423 50.000 0.00 0.00 32.67 4.24
846 847 2.617308 CACTATGGGATTTGAGCAGCTG 59.383 50.000 10.11 10.11 0.00 4.24
847 848 1.607628 CTATGGGATTTGAGCAGCTGC 59.392 52.381 31.53 31.53 42.49 5.25
848 849 1.041447 ATGGGATTTGAGCAGCTGCC 61.041 55.000 34.39 24.89 43.38 4.85
849 850 1.379576 GGGATTTGAGCAGCTGCCT 60.380 57.895 34.39 21.60 43.38 4.75
850 851 1.382692 GGGATTTGAGCAGCTGCCTC 61.383 60.000 34.39 27.79 43.38 4.70
851 852 0.394080 GGATTTGAGCAGCTGCCTCT 60.394 55.000 34.39 17.46 43.38 3.69
852 853 1.134280 GGATTTGAGCAGCTGCCTCTA 60.134 52.381 34.39 22.75 43.38 2.43
853 854 2.211806 GATTTGAGCAGCTGCCTCTAG 58.788 52.381 34.39 0.00 43.38 2.43
854 855 0.979665 TTTGAGCAGCTGCCTCTAGT 59.020 50.000 34.39 15.79 43.38 2.57
855 856 1.852633 TTGAGCAGCTGCCTCTAGTA 58.147 50.000 34.39 12.39 43.38 1.82
856 857 1.397672 TGAGCAGCTGCCTCTAGTAG 58.602 55.000 34.39 0.00 43.38 2.57
869 870 3.630312 CCTCTAGTAGGTTCTGAGTGAGC 59.370 52.174 0.00 0.00 40.94 4.26
870 871 4.265893 CTCTAGTAGGTTCTGAGTGAGCA 58.734 47.826 0.00 0.00 0.00 4.26
871 872 4.265893 TCTAGTAGGTTCTGAGTGAGCAG 58.734 47.826 0.00 0.00 37.24 4.24
872 873 2.175202 AGTAGGTTCTGAGTGAGCAGG 58.825 52.381 0.00 0.00 36.55 4.85
873 874 0.898320 TAGGTTCTGAGTGAGCAGGC 59.102 55.000 0.00 0.00 36.55 4.85
874 875 1.376553 GGTTCTGAGTGAGCAGGCC 60.377 63.158 0.00 0.00 36.55 5.19
875 876 1.372683 GTTCTGAGTGAGCAGGCCA 59.627 57.895 5.01 0.00 36.55 5.36
876 877 0.250467 GTTCTGAGTGAGCAGGCCAA 60.250 55.000 5.01 0.00 36.55 4.52
877 878 0.035881 TTCTGAGTGAGCAGGCCAAG 59.964 55.000 5.01 0.00 36.55 3.61
878 879 1.376942 CTGAGTGAGCAGGCCAAGG 60.377 63.158 5.01 0.00 32.26 3.61
879 880 2.749441 GAGTGAGCAGGCCAAGGC 60.749 66.667 5.01 5.60 41.06 4.35
889 890 2.349755 GCCAAGGCCGAAGTGGTA 59.650 61.111 16.16 0.00 41.21 3.25
890 891 1.745489 GCCAAGGCCGAAGTGGTAG 60.745 63.158 16.16 0.00 41.21 3.18
891 892 1.980052 CCAAGGCCGAAGTGGTAGA 59.020 57.895 0.00 0.00 41.21 2.59
892 893 0.323629 CCAAGGCCGAAGTGGTAGAA 59.676 55.000 0.00 0.00 41.21 2.10
893 894 1.676014 CCAAGGCCGAAGTGGTAGAAG 60.676 57.143 0.00 0.00 41.21 2.85
894 895 0.036294 AAGGCCGAAGTGGTAGAAGC 60.036 55.000 0.00 0.00 41.21 3.86
895 896 1.449778 GGCCGAAGTGGTAGAAGCC 60.450 63.158 0.00 0.00 41.21 4.35
896 897 1.449778 GCCGAAGTGGTAGAAGCCC 60.450 63.158 0.00 0.00 41.21 5.19
897 898 1.980052 CCGAAGTGGTAGAAGCCCA 59.020 57.895 0.00 0.00 0.00 5.36
898 899 0.541863 CCGAAGTGGTAGAAGCCCAT 59.458 55.000 0.00 0.00 33.76 4.00
899 900 1.656652 CGAAGTGGTAGAAGCCCATG 58.343 55.000 0.00 0.00 33.76 3.66
900 901 1.743772 CGAAGTGGTAGAAGCCCATGG 60.744 57.143 4.14 4.14 33.76 3.66
901 902 1.282157 GAAGTGGTAGAAGCCCATGGT 59.718 52.381 11.73 0.00 33.76 3.55
902 903 0.912486 AGTGGTAGAAGCCCATGGTC 59.088 55.000 11.73 0.00 33.76 4.02
903 904 0.618458 GTGGTAGAAGCCCATGGTCA 59.382 55.000 11.73 0.00 33.76 4.02
904 905 0.911769 TGGTAGAAGCCCATGGTCAG 59.088 55.000 11.73 0.00 0.00 3.51
905 906 0.912486 GGTAGAAGCCCATGGTCAGT 59.088 55.000 11.73 0.00 0.00 3.41
906 907 1.134371 GGTAGAAGCCCATGGTCAGTC 60.134 57.143 11.73 0.00 0.00 3.51
907 908 1.134371 GTAGAAGCCCATGGTCAGTCC 60.134 57.143 11.73 0.00 0.00 3.85
915 916 3.694746 TGGTCAGTCCAGCCGTAG 58.305 61.111 0.00 0.00 41.93 3.51
954 956 2.029380 GTCGCTGCCAAAAACCCTATTT 60.029 45.455 0.00 0.00 0.00 1.40
957 959 2.354704 GCTGCCAAAAACCCTATTTCCC 60.355 50.000 0.00 0.00 0.00 3.97
958 960 2.903135 CTGCCAAAAACCCTATTTCCCA 59.097 45.455 0.00 0.00 0.00 4.37
1174 1200 2.567049 GCTACGACTGGTGCGTCT 59.433 61.111 0.00 0.00 42.62 4.18
1182 1208 1.405821 GACTGGTGCGTCTGCTACTAT 59.594 52.381 0.00 0.00 43.34 2.12
1317 1359 0.399091 TGATCTTCTCCCGGCCATCT 60.399 55.000 2.24 0.00 0.00 2.90
1320 1362 0.325671 TCTTCTCCCGGCCATCTTCT 60.326 55.000 2.24 0.00 0.00 2.85
1380 1742 1.066430 GGGGCTTACACGTTCATGAGA 60.066 52.381 0.00 0.00 0.00 3.27
1385 1747 3.262420 CTTACACGTTCATGAGAAGGGG 58.738 50.000 0.00 0.00 45.93 4.79
1387 1749 1.079127 ACGTTCATGAGAAGGGGCG 60.079 57.895 0.00 0.00 42.41 6.13
1404 1766 2.692368 GTCCTGGAGGCATCCCCA 60.692 66.667 16.13 0.00 46.04 4.96
1405 1767 2.127065 TCCTGGAGGCATCCCCAA 59.873 61.111 16.13 0.00 46.04 4.12
1406 1768 2.002977 TCCTGGAGGCATCCCCAAG 61.003 63.158 16.13 5.54 46.04 3.61
1407 1769 2.002977 CCTGGAGGCATCCCCAAGA 61.003 63.158 16.13 0.00 46.04 3.02
1408 1770 1.574526 CCTGGAGGCATCCCCAAGAA 61.575 60.000 16.13 0.00 46.04 2.52
1409 1771 0.332632 CTGGAGGCATCCCCAAGAAA 59.667 55.000 16.13 0.00 46.04 2.52
1506 1880 4.681978 ACCGCCAAGACGCCTCAC 62.682 66.667 0.00 0.00 0.00 3.51
1547 1921 3.535561 ACCTGTCCAATAATCTCGCAAG 58.464 45.455 0.00 0.00 0.00 4.01
1877 2260 1.610102 GCTCAAGCTGATGTGTGAGGT 60.610 52.381 11.74 0.00 38.34 3.85
1884 2267 2.355513 GCTGATGTGTGAGGTCATCCTT 60.356 50.000 0.00 0.00 45.24 3.36
2090 2485 1.331756 GATATGCACTGCCGTCCTTTG 59.668 52.381 0.00 0.00 0.00 2.77
2107 2502 3.763360 CCTTTGGATCATGTTGCCTTGTA 59.237 43.478 0.00 0.00 0.00 2.41
2137 2533 6.617371 AGTCTTCACATATATTTGGGAGGAGT 59.383 38.462 9.92 10.36 36.00 3.85
2200 2662 6.315642 CCTATATGTGAATCCATGCTAGCTTG 59.684 42.308 20.77 20.77 0.00 4.01
2205 2667 3.441222 TGAATCCATGCTAGCTTGTTGTG 59.559 43.478 24.31 12.35 0.00 3.33
2206 2668 1.167851 TCCATGCTAGCTTGTTGTGC 58.832 50.000 24.31 0.00 0.00 4.57
2207 2669 0.171903 CCATGCTAGCTTGTTGTGCC 59.828 55.000 24.31 0.00 0.00 5.01
2261 2731 8.287503 TCCTTTTCGTGCTCTTCTTTTTATTAC 58.712 33.333 0.00 0.00 0.00 1.89
2264 2734 7.956420 TTCGTGCTCTTCTTTTTATTACTCA 57.044 32.000 0.00 0.00 0.00 3.41
2266 2736 8.373048 TCGTGCTCTTCTTTTTATTACTCAAA 57.627 30.769 0.00 0.00 0.00 2.69
2307 2777 5.233988 CAGGCTAACATCAACTAGATAGGC 58.766 45.833 0.00 0.00 36.28 3.93
2486 2958 4.157656 GCATATGCCCAGACAACACTAAAA 59.842 41.667 17.26 0.00 34.31 1.52
2490 2962 4.406456 TGCCCAGACAACACTAAAATGAT 58.594 39.130 0.00 0.00 0.00 2.45
2580 3053 8.896744 CAGGGCACACATAATATATATTTCAGG 58.103 37.037 13.09 1.33 0.00 3.86
2792 3266 9.817365 CAATAGCAGTGTATCATATAACTTTGC 57.183 33.333 0.00 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.821589 CGAAGAGGCCGGGTGCTC 62.822 72.222 2.18 0.00 40.92 4.26
2 3 1.741327 TATACGAAGAGGCCGGGTGC 61.741 60.000 2.18 0.00 40.16 5.01
3 4 0.314302 CTATACGAAGAGGCCGGGTG 59.686 60.000 2.18 0.00 0.00 4.61
6 7 1.269998 CTTCCTATACGAAGAGGCCGG 59.730 57.143 0.00 0.00 41.57 6.13
7 8 1.336056 GCTTCCTATACGAAGAGGCCG 60.336 57.143 13.69 0.00 41.57 6.13
8 9 1.687123 TGCTTCCTATACGAAGAGGCC 59.313 52.381 13.69 0.00 41.57 5.19
9 10 2.623889 TCTGCTTCCTATACGAAGAGGC 59.376 50.000 13.69 2.62 41.57 4.70
10 11 3.004944 GGTCTGCTTCCTATACGAAGAGG 59.995 52.174 13.69 6.69 41.57 3.69
11 12 3.886505 AGGTCTGCTTCCTATACGAAGAG 59.113 47.826 13.69 8.97 41.57 2.85
12 13 3.899726 AGGTCTGCTTCCTATACGAAGA 58.100 45.455 13.69 1.50 41.57 2.87
13 14 5.968528 ATAGGTCTGCTTCCTATACGAAG 57.031 43.478 11.27 7.01 43.79 3.79
14 15 6.776744 TCTATAGGTCTGCTTCCTATACGAA 58.223 40.000 13.84 5.16 43.79 3.85
15 16 6.370186 TCTATAGGTCTGCTTCCTATACGA 57.630 41.667 13.84 12.73 43.79 3.43
16 17 6.403855 GCTTCTATAGGTCTGCTTCCTATACG 60.404 46.154 13.84 11.43 43.79 3.06
17 18 6.403855 CGCTTCTATAGGTCTGCTTCCTATAC 60.404 46.154 13.84 7.36 43.79 1.47
18 19 5.648526 CGCTTCTATAGGTCTGCTTCCTATA 59.351 44.000 15.69 15.69 43.79 1.31
19 20 4.461081 CGCTTCTATAGGTCTGCTTCCTAT 59.539 45.833 15.28 15.28 46.25 2.57
20 21 3.821600 CGCTTCTATAGGTCTGCTTCCTA 59.178 47.826 0.00 5.03 41.08 2.94
21 22 2.625790 CGCTTCTATAGGTCTGCTTCCT 59.374 50.000 0.00 0.00 38.91 3.36
22 23 2.288518 CCGCTTCTATAGGTCTGCTTCC 60.289 54.545 0.00 0.00 0.00 3.46
23 24 2.623889 TCCGCTTCTATAGGTCTGCTTC 59.376 50.000 0.00 0.00 0.00 3.86
24 25 2.625790 CTCCGCTTCTATAGGTCTGCTT 59.374 50.000 0.00 0.00 0.00 3.91
25 26 2.158593 TCTCCGCTTCTATAGGTCTGCT 60.159 50.000 0.00 0.00 0.00 4.24
26 27 2.231529 TCTCCGCTTCTATAGGTCTGC 58.768 52.381 0.00 0.00 0.00 4.26
27 28 5.124776 CCTTATCTCCGCTTCTATAGGTCTG 59.875 48.000 0.00 0.00 0.00 3.51
28 29 5.014333 TCCTTATCTCCGCTTCTATAGGTCT 59.986 44.000 0.00 0.00 0.00 3.85
29 30 5.254901 TCCTTATCTCCGCTTCTATAGGTC 58.745 45.833 0.00 0.00 0.00 3.85
30 31 5.258216 TCCTTATCTCCGCTTCTATAGGT 57.742 43.478 0.00 0.00 0.00 3.08
31 32 5.068460 CCATCCTTATCTCCGCTTCTATAGG 59.932 48.000 0.00 0.00 0.00 2.57
32 33 5.451242 GCCATCCTTATCTCCGCTTCTATAG 60.451 48.000 0.00 0.00 0.00 1.31
33 34 4.402793 GCCATCCTTATCTCCGCTTCTATA 59.597 45.833 0.00 0.00 0.00 1.31
34 35 3.196685 GCCATCCTTATCTCCGCTTCTAT 59.803 47.826 0.00 0.00 0.00 1.98
35 36 2.563179 GCCATCCTTATCTCCGCTTCTA 59.437 50.000 0.00 0.00 0.00 2.10
36 37 1.346068 GCCATCCTTATCTCCGCTTCT 59.654 52.381 0.00 0.00 0.00 2.85
37 38 1.609320 GGCCATCCTTATCTCCGCTTC 60.609 57.143 0.00 0.00 0.00 3.86
38 39 0.398318 GGCCATCCTTATCTCCGCTT 59.602 55.000 0.00 0.00 0.00 4.68
39 40 1.821061 CGGCCATCCTTATCTCCGCT 61.821 60.000 2.24 0.00 0.00 5.52
40 41 1.374758 CGGCCATCCTTATCTCCGC 60.375 63.158 2.24 0.00 0.00 5.54
41 42 0.898320 ATCGGCCATCCTTATCTCCG 59.102 55.000 2.24 0.00 38.34 4.63
42 43 1.065854 CCATCGGCCATCCTTATCTCC 60.066 57.143 2.24 0.00 0.00 3.71
43 44 1.677217 GCCATCGGCCATCCTTATCTC 60.677 57.143 2.24 0.00 44.06 2.75
44 45 0.326264 GCCATCGGCCATCCTTATCT 59.674 55.000 2.24 0.00 44.06 1.98
45 46 2.859992 GCCATCGGCCATCCTTATC 58.140 57.895 2.24 0.00 44.06 1.75
57 58 4.170062 CACGCTGCAAGGCCATCG 62.170 66.667 5.01 0.84 0.00 3.84
58 59 2.747460 TCACGCTGCAAGGCCATC 60.747 61.111 5.01 0.00 0.00 3.51
59 60 2.749044 CTCACGCTGCAAGGCCAT 60.749 61.111 5.01 0.00 0.00 4.40
60 61 3.939939 TCTCACGCTGCAAGGCCA 61.940 61.111 5.01 0.00 0.00 5.36
61 62 3.426568 GTCTCACGCTGCAAGGCC 61.427 66.667 0.00 0.00 0.00 5.19
62 63 3.782244 CGTCTCACGCTGCAAGGC 61.782 66.667 0.00 0.00 33.65 4.35
63 64 3.114616 CCGTCTCACGCTGCAAGG 61.115 66.667 0.00 0.00 40.91 3.61
64 65 2.049156 TCCGTCTCACGCTGCAAG 60.049 61.111 0.00 0.00 40.91 4.01
65 66 2.355837 GTCCGTCTCACGCTGCAA 60.356 61.111 0.00 0.00 40.91 4.08
66 67 4.700365 CGTCCGTCTCACGCTGCA 62.700 66.667 0.00 0.00 40.91 4.41
68 69 4.039357 ACCGTCCGTCTCACGCTG 62.039 66.667 0.00 0.00 40.91 5.18
69 70 4.039357 CACCGTCCGTCTCACGCT 62.039 66.667 0.00 0.00 40.91 5.07
70 71 3.836176 AACACCGTCCGTCTCACGC 62.836 63.158 0.00 0.00 40.91 5.34
71 72 2.014554 CAACACCGTCCGTCTCACG 61.015 63.158 0.00 0.00 42.11 4.35
72 73 1.663702 CCAACACCGTCCGTCTCAC 60.664 63.158 0.00 0.00 0.00 3.51
73 74 2.732016 CCAACACCGTCCGTCTCA 59.268 61.111 0.00 0.00 0.00 3.27
74 75 2.048503 CCCAACACCGTCCGTCTC 60.049 66.667 0.00 0.00 0.00 3.36
75 76 3.622826 CCCCAACACCGTCCGTCT 61.623 66.667 0.00 0.00 0.00 4.18
109 110 1.918868 CTAGAAAAACCACGGCCGCC 61.919 60.000 28.58 0.00 0.00 6.13
110 111 1.232621 ACTAGAAAAACCACGGCCGC 61.233 55.000 28.58 5.95 0.00 6.53
111 112 1.728425 GTACTAGAAAAACCACGGCCG 59.272 52.381 26.86 26.86 0.00 6.13
112 113 2.079158 GGTACTAGAAAAACCACGGCC 58.921 52.381 0.00 0.00 33.28 6.13
113 114 2.740447 CTGGTACTAGAAAAACCACGGC 59.260 50.000 0.00 0.00 38.36 5.68
114 115 2.740447 GCTGGTACTAGAAAAACCACGG 59.260 50.000 10.90 0.00 38.36 4.94
115 116 2.410730 CGCTGGTACTAGAAAAACCACG 59.589 50.000 10.90 7.55 38.36 4.94
116 117 2.740447 CCGCTGGTACTAGAAAAACCAC 59.260 50.000 10.90 0.21 38.36 4.16
117 118 2.872842 GCCGCTGGTACTAGAAAAACCA 60.873 50.000 10.90 3.91 40.94 3.67
118 119 1.736126 GCCGCTGGTACTAGAAAAACC 59.264 52.381 10.90 0.00 0.00 3.27
119 120 1.392510 CGCCGCTGGTACTAGAAAAAC 59.607 52.381 10.90 0.00 0.00 2.43
120 121 1.273048 TCGCCGCTGGTACTAGAAAAA 59.727 47.619 10.90 0.00 0.00 1.94
121 122 0.889994 TCGCCGCTGGTACTAGAAAA 59.110 50.000 10.90 0.00 0.00 2.29
122 123 1.108776 ATCGCCGCTGGTACTAGAAA 58.891 50.000 10.90 0.00 0.00 2.52
123 124 0.384309 CATCGCCGCTGGTACTAGAA 59.616 55.000 10.90 0.00 0.00 2.10
124 125 0.464916 TCATCGCCGCTGGTACTAGA 60.465 55.000 10.90 0.00 0.00 2.43
125 126 0.039978 CTCATCGCCGCTGGTACTAG 60.040 60.000 1.08 1.08 0.00 2.57
126 127 0.464916 TCTCATCGCCGCTGGTACTA 60.465 55.000 0.00 0.00 0.00 1.82
127 128 1.320344 TTCTCATCGCCGCTGGTACT 61.320 55.000 0.00 0.00 0.00 2.73
128 129 0.459585 TTTCTCATCGCCGCTGGTAC 60.460 55.000 0.00 0.00 0.00 3.34
129 130 0.179111 CTTTCTCATCGCCGCTGGTA 60.179 55.000 0.00 0.00 0.00 3.25
130 131 1.448540 CTTTCTCATCGCCGCTGGT 60.449 57.895 0.00 0.00 0.00 4.00
131 132 2.176273 CCTTTCTCATCGCCGCTGG 61.176 63.158 0.00 0.00 0.00 4.85
132 133 2.817423 GCCTTTCTCATCGCCGCTG 61.817 63.158 0.00 0.00 0.00 5.18
133 134 2.512515 GCCTTTCTCATCGCCGCT 60.513 61.111 0.00 0.00 0.00 5.52
134 135 3.577313 GGCCTTTCTCATCGCCGC 61.577 66.667 0.00 0.00 0.00 6.53
135 136 2.125147 TGGCCTTTCTCATCGCCG 60.125 61.111 3.32 0.00 44.71 6.46
136 137 0.960364 TTGTGGCCTTTCTCATCGCC 60.960 55.000 3.32 0.00 41.99 5.54
137 138 0.881118 TTTGTGGCCTTTCTCATCGC 59.119 50.000 3.32 0.00 0.00 4.58
138 139 1.879380 TGTTTGTGGCCTTTCTCATCG 59.121 47.619 3.32 0.00 0.00 3.84
139 140 2.029918 GGTGTTTGTGGCCTTTCTCATC 60.030 50.000 3.32 0.00 0.00 2.92
140 141 1.963515 GGTGTTTGTGGCCTTTCTCAT 59.036 47.619 3.32 0.00 0.00 2.90
141 142 1.398692 GGTGTTTGTGGCCTTTCTCA 58.601 50.000 3.32 0.00 0.00 3.27
494 495 4.256180 CATCGCTACCCAGGCCCC 62.256 72.222 0.00 0.00 0.00 5.80
495 496 4.256180 CCATCGCTACCCAGGCCC 62.256 72.222 0.00 0.00 0.00 5.80
496 497 3.161450 TCCATCGCTACCCAGGCC 61.161 66.667 0.00 0.00 0.00 5.19
497 498 2.423446 CTCCATCGCTACCCAGGC 59.577 66.667 0.00 0.00 0.00 4.85
498 499 2.423446 GCTCCATCGCTACCCAGG 59.577 66.667 0.00 0.00 0.00 4.45
499 500 2.028190 CGCTCCATCGCTACCCAG 59.972 66.667 0.00 0.00 0.00 4.45
500 501 3.536917 CCGCTCCATCGCTACCCA 61.537 66.667 0.00 0.00 0.00 4.51
501 502 4.301027 CCCGCTCCATCGCTACCC 62.301 72.222 0.00 0.00 0.00 3.69
502 503 4.971125 GCCCGCTCCATCGCTACC 62.971 72.222 0.00 0.00 0.00 3.18
507 508 1.714899 ATTTTTCGCCCGCTCCATCG 61.715 55.000 0.00 0.00 0.00 3.84
508 509 0.248621 CATTTTTCGCCCGCTCCATC 60.249 55.000 0.00 0.00 0.00 3.51
509 510 1.666209 CCATTTTTCGCCCGCTCCAT 61.666 55.000 0.00 0.00 0.00 3.41
510 511 2.339556 CCATTTTTCGCCCGCTCCA 61.340 57.895 0.00 0.00 0.00 3.86
511 512 2.489751 CCATTTTTCGCCCGCTCC 59.510 61.111 0.00 0.00 0.00 4.70
512 513 2.202610 GCCATTTTTCGCCCGCTC 60.203 61.111 0.00 0.00 0.00 5.03
513 514 2.676471 AGCCATTTTTCGCCCGCT 60.676 55.556 0.00 0.00 0.00 5.52
514 515 2.506881 CAGCCATTTTTCGCCCGC 60.507 61.111 0.00 0.00 0.00 6.13
515 516 2.506881 GCAGCCATTTTTCGCCCG 60.507 61.111 0.00 0.00 0.00 6.13
516 517 2.506881 CGCAGCCATTTTTCGCCC 60.507 61.111 0.00 0.00 0.00 6.13
529 530 1.532505 GCATGGTTTGTATCTGCGCAG 60.533 52.381 31.53 31.53 0.00 5.18
530 531 0.451383 GCATGGTTTGTATCTGCGCA 59.549 50.000 10.98 10.98 0.00 6.09
531 532 0.248621 GGCATGGTTTGTATCTGCGC 60.249 55.000 0.00 0.00 33.69 6.09
532 533 0.381801 GGGCATGGTTTGTATCTGCG 59.618 55.000 0.00 0.00 33.69 5.18
533 534 1.473258 TGGGCATGGTTTGTATCTGC 58.527 50.000 0.00 0.00 0.00 4.26
534 535 4.741321 ATTTGGGCATGGTTTGTATCTG 57.259 40.909 0.00 0.00 0.00 2.90
535 536 5.248020 TCAAATTTGGGCATGGTTTGTATCT 59.752 36.000 17.90 0.00 32.97 1.98
536 537 5.486526 TCAAATTTGGGCATGGTTTGTATC 58.513 37.500 17.90 0.00 32.97 2.24
537 538 5.490159 CTCAAATTTGGGCATGGTTTGTAT 58.510 37.500 17.90 0.00 32.97 2.29
538 539 4.892433 CTCAAATTTGGGCATGGTTTGTA 58.108 39.130 17.90 0.00 32.97 2.41
539 540 3.742385 CTCAAATTTGGGCATGGTTTGT 58.258 40.909 17.90 0.00 32.97 2.83
549 550 4.004982 CCCATTTTCTGCTCAAATTTGGG 58.995 43.478 17.90 16.04 34.86 4.12
550 551 4.644498 ACCCATTTTCTGCTCAAATTTGG 58.356 39.130 17.90 9.84 0.00 3.28
551 552 5.299148 TGACCCATTTTCTGCTCAAATTTG 58.701 37.500 12.15 12.15 0.00 2.32
552 553 5.549742 TGACCCATTTTCTGCTCAAATTT 57.450 34.783 0.00 0.00 0.00 1.82
553 554 5.750352 ATGACCCATTTTCTGCTCAAATT 57.250 34.783 0.00 0.00 0.00 1.82
554 555 5.361857 CCTATGACCCATTTTCTGCTCAAAT 59.638 40.000 0.00 0.00 0.00 2.32
555 556 4.706476 CCTATGACCCATTTTCTGCTCAAA 59.294 41.667 0.00 0.00 0.00 2.69
556 557 4.272489 CCTATGACCCATTTTCTGCTCAA 58.728 43.478 0.00 0.00 0.00 3.02
557 558 3.889815 CCTATGACCCATTTTCTGCTCA 58.110 45.455 0.00 0.00 0.00 4.26
558 559 2.620585 GCCTATGACCCATTTTCTGCTC 59.379 50.000 0.00 0.00 0.00 4.26
559 560 2.659428 GCCTATGACCCATTTTCTGCT 58.341 47.619 0.00 0.00 0.00 4.24
560 561 1.334869 CGCCTATGACCCATTTTCTGC 59.665 52.381 0.00 0.00 0.00 4.26
561 562 1.949525 CCGCCTATGACCCATTTTCTG 59.050 52.381 0.00 0.00 0.00 3.02
562 563 1.843851 TCCGCCTATGACCCATTTTCT 59.156 47.619 0.00 0.00 0.00 2.52
563 564 2.341846 TCCGCCTATGACCCATTTTC 57.658 50.000 0.00 0.00 0.00 2.29
564 565 4.447138 TTATCCGCCTATGACCCATTTT 57.553 40.909 0.00 0.00 0.00 1.82
565 566 4.447138 TTTATCCGCCTATGACCCATTT 57.553 40.909 0.00 0.00 0.00 2.32
566 567 4.447138 TTTTATCCGCCTATGACCCATT 57.553 40.909 0.00 0.00 0.00 3.16
567 568 4.447138 TTTTTATCCGCCTATGACCCAT 57.553 40.909 0.00 0.00 0.00 4.00
568 569 3.935818 TTTTTATCCGCCTATGACCCA 57.064 42.857 0.00 0.00 0.00 4.51
585 586 1.375551 ACAGACAGGCGTTCGTTTTT 58.624 45.000 0.00 0.00 0.00 1.94
586 587 1.375551 AACAGACAGGCGTTCGTTTT 58.624 45.000 0.00 0.00 0.00 2.43
587 588 1.375551 AAACAGACAGGCGTTCGTTT 58.624 45.000 0.00 0.00 0.00 3.60
588 589 2.132762 CTAAACAGACAGGCGTTCGTT 58.867 47.619 0.00 0.00 0.00 3.85
589 590 1.604693 CCTAAACAGACAGGCGTTCGT 60.605 52.381 0.00 0.00 0.00 3.85
590 591 1.068474 CCTAAACAGACAGGCGTTCG 58.932 55.000 0.00 0.00 0.00 3.95
591 592 2.067013 GACCTAAACAGACAGGCGTTC 58.933 52.381 0.00 0.00 35.14 3.95
592 593 1.604693 CGACCTAAACAGACAGGCGTT 60.605 52.381 0.00 0.00 35.14 4.84
593 594 0.038526 CGACCTAAACAGACAGGCGT 60.039 55.000 0.00 0.00 35.14 5.68
594 595 1.352156 GCGACCTAAACAGACAGGCG 61.352 60.000 0.00 0.00 35.14 5.52
595 596 0.037232 AGCGACCTAAACAGACAGGC 60.037 55.000 0.00 0.00 35.14 4.85
596 597 1.000955 ACAGCGACCTAAACAGACAGG 59.999 52.381 0.00 0.00 37.97 4.00
597 598 2.061773 CACAGCGACCTAAACAGACAG 58.938 52.381 0.00 0.00 0.00 3.51
598 599 1.411246 ACACAGCGACCTAAACAGACA 59.589 47.619 0.00 0.00 0.00 3.41
599 600 2.150397 ACACAGCGACCTAAACAGAC 57.850 50.000 0.00 0.00 0.00 3.51
600 601 2.479837 CAACACAGCGACCTAAACAGA 58.520 47.619 0.00 0.00 0.00 3.41
601 602 1.531149 CCAACACAGCGACCTAAACAG 59.469 52.381 0.00 0.00 0.00 3.16
602 603 1.588674 CCAACACAGCGACCTAAACA 58.411 50.000 0.00 0.00 0.00 2.83
603 604 0.872388 CCCAACACAGCGACCTAAAC 59.128 55.000 0.00 0.00 0.00 2.01
604 605 0.470766 ACCCAACACAGCGACCTAAA 59.529 50.000 0.00 0.00 0.00 1.85
605 606 0.034337 GACCCAACACAGCGACCTAA 59.966 55.000 0.00 0.00 0.00 2.69
606 607 1.116536 TGACCCAACACAGCGACCTA 61.117 55.000 0.00 0.00 0.00 3.08
607 608 1.768684 ATGACCCAACACAGCGACCT 61.769 55.000 0.00 0.00 0.00 3.85
608 609 1.302511 ATGACCCAACACAGCGACC 60.303 57.895 0.00 0.00 0.00 4.79
609 610 0.602638 TCATGACCCAACACAGCGAC 60.603 55.000 0.00 0.00 0.00 5.19
610 611 0.324614 ATCATGACCCAACACAGCGA 59.675 50.000 0.00 0.00 0.00 4.93
611 612 1.167851 AATCATGACCCAACACAGCG 58.832 50.000 0.00 0.00 0.00 5.18
612 613 2.297033 ACAAATCATGACCCAACACAGC 59.703 45.455 0.00 0.00 0.00 4.40
613 614 3.318839 ACACAAATCATGACCCAACACAG 59.681 43.478 0.00 0.00 0.00 3.66
614 615 3.295093 ACACAAATCATGACCCAACACA 58.705 40.909 0.00 0.00 0.00 3.72
615 616 3.609175 CGACACAAATCATGACCCAACAC 60.609 47.826 0.00 0.00 0.00 3.32
616 617 2.551887 CGACACAAATCATGACCCAACA 59.448 45.455 0.00 0.00 0.00 3.33
617 618 2.811431 TCGACACAAATCATGACCCAAC 59.189 45.455 0.00 0.00 0.00 3.77
618 619 3.133141 TCGACACAAATCATGACCCAA 57.867 42.857 0.00 0.00 0.00 4.12
619 620 2.849294 TCGACACAAATCATGACCCA 57.151 45.000 0.00 0.00 0.00 4.51
620 621 3.242413 CGAATCGACACAAATCATGACCC 60.242 47.826 0.00 0.00 0.00 4.46
621 622 3.616821 TCGAATCGACACAAATCATGACC 59.383 43.478 0.00 0.00 0.00 4.02
622 623 4.259970 CCTCGAATCGACACAAATCATGAC 60.260 45.833 0.00 0.00 0.00 3.06
623 624 3.865164 CCTCGAATCGACACAAATCATGA 59.135 43.478 0.00 0.00 0.00 3.07
624 625 3.865164 TCCTCGAATCGACACAAATCATG 59.135 43.478 0.00 0.00 0.00 3.07
625 626 4.123497 TCCTCGAATCGACACAAATCAT 57.877 40.909 0.00 0.00 0.00 2.45
626 627 3.586100 TCCTCGAATCGACACAAATCA 57.414 42.857 0.00 0.00 0.00 2.57
627 628 4.681942 CCTATCCTCGAATCGACACAAATC 59.318 45.833 0.00 0.00 0.00 2.17
628 629 4.341235 TCCTATCCTCGAATCGACACAAAT 59.659 41.667 0.00 0.00 0.00 2.32
629 630 3.697542 TCCTATCCTCGAATCGACACAAA 59.302 43.478 0.00 0.00 0.00 2.83
630 631 3.284617 TCCTATCCTCGAATCGACACAA 58.715 45.455 0.00 0.00 0.00 3.33
631 632 2.927028 TCCTATCCTCGAATCGACACA 58.073 47.619 0.00 0.00 0.00 3.72
632 633 3.366476 CCATCCTATCCTCGAATCGACAC 60.366 52.174 0.00 0.00 0.00 3.67
633 634 2.820197 CCATCCTATCCTCGAATCGACA 59.180 50.000 0.00 0.00 0.00 4.35
634 635 3.082548 TCCATCCTATCCTCGAATCGAC 58.917 50.000 0.00 0.00 0.00 4.20
635 636 3.082548 GTCCATCCTATCCTCGAATCGA 58.917 50.000 4.91 4.91 0.00 3.59
636 637 2.164624 GGTCCATCCTATCCTCGAATCG 59.835 54.545 0.00 0.00 0.00 3.34
637 638 3.165875 TGGTCCATCCTATCCTCGAATC 58.834 50.000 0.00 0.00 37.07 2.52
638 639 3.260269 TGGTCCATCCTATCCTCGAAT 57.740 47.619 0.00 0.00 37.07 3.34
639 640 2.767644 TGGTCCATCCTATCCTCGAA 57.232 50.000 0.00 0.00 37.07 3.71
640 641 2.767644 TTGGTCCATCCTATCCTCGA 57.232 50.000 0.00 0.00 37.07 4.04
641 642 5.423015 CATATTTGGTCCATCCTATCCTCG 58.577 45.833 0.00 0.00 37.07 4.63
642 643 5.749462 CCATATTTGGTCCATCCTATCCTC 58.251 45.833 0.00 0.00 38.30 3.71
643 644 5.786121 CCATATTTGGTCCATCCTATCCT 57.214 43.478 0.00 0.00 38.30 3.24
657 658 3.440173 ACTCCAAAGCACGACCATATTTG 59.560 43.478 0.00 0.00 0.00 2.32
658 659 3.686016 ACTCCAAAGCACGACCATATTT 58.314 40.909 0.00 0.00 0.00 1.40
659 660 3.350219 ACTCCAAAGCACGACCATATT 57.650 42.857 0.00 0.00 0.00 1.28
660 661 3.009723 CAACTCCAAAGCACGACCATAT 58.990 45.455 0.00 0.00 0.00 1.78
661 662 2.422597 CAACTCCAAAGCACGACCATA 58.577 47.619 0.00 0.00 0.00 2.74
662 663 1.238439 CAACTCCAAAGCACGACCAT 58.762 50.000 0.00 0.00 0.00 3.55
663 664 0.817634 CCAACTCCAAAGCACGACCA 60.818 55.000 0.00 0.00 0.00 4.02
664 665 1.949257 CCAACTCCAAAGCACGACC 59.051 57.895 0.00 0.00 0.00 4.79
665 666 1.282875 GCCAACTCCAAAGCACGAC 59.717 57.895 0.00 0.00 0.00 4.34
666 667 1.896660 GGCCAACTCCAAAGCACGA 60.897 57.895 0.00 0.00 0.00 4.35
667 668 2.644992 GGCCAACTCCAAAGCACG 59.355 61.111 0.00 0.00 0.00 5.34
668 669 2.919494 CGGGCCAACTCCAAAGCAC 61.919 63.158 4.39 0.00 0.00 4.40
669 670 2.597217 CGGGCCAACTCCAAAGCA 60.597 61.111 4.39 0.00 0.00 3.91
670 671 2.282180 TCGGGCCAACTCCAAAGC 60.282 61.111 4.39 0.00 0.00 3.51
671 672 0.323629 TAGTCGGGCCAACTCCAAAG 59.676 55.000 12.90 0.00 0.00 2.77
672 673 0.035739 GTAGTCGGGCCAACTCCAAA 59.964 55.000 12.90 0.00 0.00 3.28
673 674 1.675219 GTAGTCGGGCCAACTCCAA 59.325 57.895 12.90 0.00 0.00 3.53
674 675 2.288025 GGTAGTCGGGCCAACTCCA 61.288 63.158 12.90 0.00 0.00 3.86
675 676 2.582978 GGTAGTCGGGCCAACTCC 59.417 66.667 12.90 10.55 0.00 3.85
676 677 2.582978 GGGTAGTCGGGCCAACTC 59.417 66.667 12.90 6.02 0.00 3.01
677 678 3.007323 GGGGTAGTCGGGCCAACT 61.007 66.667 13.88 13.88 0.00 3.16
678 679 2.897762 TTGGGGTAGTCGGGCCAAC 61.898 63.158 4.39 1.37 0.00 3.77
679 680 2.529643 TTGGGGTAGTCGGGCCAA 60.530 61.111 4.39 0.00 0.00 4.52
680 681 3.324108 GTTGGGGTAGTCGGGCCA 61.324 66.667 4.39 0.00 0.00 5.36
681 682 4.105553 GGTTGGGGTAGTCGGGCC 62.106 72.222 0.00 0.00 0.00 5.80
682 683 1.339644 TATGGTTGGGGTAGTCGGGC 61.340 60.000 0.00 0.00 0.00 6.13
683 684 0.756903 CTATGGTTGGGGTAGTCGGG 59.243 60.000 0.00 0.00 0.00 5.14
684 685 0.756903 CCTATGGTTGGGGTAGTCGG 59.243 60.000 0.00 0.00 0.00 4.79
685 686 0.106149 GCCTATGGTTGGGGTAGTCG 59.894 60.000 0.00 0.00 0.00 4.18
686 687 0.472898 GGCCTATGGTTGGGGTAGTC 59.527 60.000 0.00 0.00 0.00 2.59
687 688 0.253441 TGGCCTATGGTTGGGGTAGT 60.253 55.000 3.32 0.00 0.00 2.73
688 689 0.474184 CTGGCCTATGGTTGGGGTAG 59.526 60.000 3.32 0.00 0.00 3.18
689 690 0.045008 TCTGGCCTATGGTTGGGGTA 59.955 55.000 3.32 0.00 0.00 3.69
690 691 0.849094 TTCTGGCCTATGGTTGGGGT 60.849 55.000 3.32 0.00 0.00 4.95
691 692 0.334676 TTTCTGGCCTATGGTTGGGG 59.665 55.000 3.32 0.00 0.00 4.96
692 693 2.459555 ATTTCTGGCCTATGGTTGGG 57.540 50.000 3.32 0.00 0.00 4.12
693 694 4.082125 GGATATTTCTGGCCTATGGTTGG 58.918 47.826 3.32 0.00 0.00 3.77
694 695 4.082125 GGGATATTTCTGGCCTATGGTTG 58.918 47.826 3.32 0.00 0.00 3.77
695 696 3.726859 TGGGATATTTCTGGCCTATGGTT 59.273 43.478 3.32 0.00 0.00 3.67
696 697 3.335748 TGGGATATTTCTGGCCTATGGT 58.664 45.455 3.32 0.00 0.00 3.55
697 698 4.229123 AGATGGGATATTTCTGGCCTATGG 59.771 45.833 3.32 0.00 0.00 2.74
698 699 5.447778 AGATGGGATATTTCTGGCCTATG 57.552 43.478 3.32 0.00 0.00 2.23
699 700 6.474918 AAAGATGGGATATTTCTGGCCTAT 57.525 37.500 3.32 0.00 0.00 2.57
700 701 5.930209 AAAGATGGGATATTTCTGGCCTA 57.070 39.130 3.32 0.00 0.00 3.93
701 702 4.821532 AAAGATGGGATATTTCTGGCCT 57.178 40.909 3.32 0.00 0.00 5.19
702 703 5.385198 TGTAAAGATGGGATATTTCTGGCC 58.615 41.667 0.00 0.00 0.00 5.36
703 704 6.959639 TTGTAAAGATGGGATATTTCTGGC 57.040 37.500 0.00 0.00 0.00 4.85
704 705 7.889469 CCATTGTAAAGATGGGATATTTCTGG 58.111 38.462 0.00 0.00 40.30 3.86
715 716 9.142014 TGGATATTTTACCCATTGTAAAGATGG 57.858 33.333 0.00 0.00 46.99 3.51
718 719 9.142014 CCATGGATATTTTACCCATTGTAAAGA 57.858 33.333 5.56 0.00 46.99 2.52
719 720 9.142014 TCCATGGATATTTTACCCATTGTAAAG 57.858 33.333 11.44 0.00 46.99 1.85
720 721 9.667607 ATCCATGGATATTTTACCCATTGTAAA 57.332 29.630 26.25 0.00 38.96 2.01
723 724 9.667607 TTTATCCATGGATATTTTACCCATTGT 57.332 29.630 30.63 6.91 38.53 2.71
744 745 7.181143 TCGTTTTAGCCGTTGGATATTTATC 57.819 36.000 0.00 0.00 0.00 1.75
745 746 7.739498 ATCGTTTTAGCCGTTGGATATTTAT 57.261 32.000 0.00 0.00 0.00 1.40
746 747 7.517101 CGAATCGTTTTAGCCGTTGGATATTTA 60.517 37.037 0.00 0.00 0.00 1.40
747 748 6.445357 AATCGTTTTAGCCGTTGGATATTT 57.555 33.333 0.00 0.00 0.00 1.40
748 749 5.277154 CGAATCGTTTTAGCCGTTGGATATT 60.277 40.000 0.00 0.00 0.00 1.28
749 750 4.210537 CGAATCGTTTTAGCCGTTGGATAT 59.789 41.667 0.00 0.00 0.00 1.63
750 751 3.552699 CGAATCGTTTTAGCCGTTGGATA 59.447 43.478 0.00 0.00 0.00 2.59
751 752 2.350498 CGAATCGTTTTAGCCGTTGGAT 59.650 45.455 0.00 0.00 0.00 3.41
752 753 1.727880 CGAATCGTTTTAGCCGTTGGA 59.272 47.619 0.00 0.00 0.00 3.53
753 754 1.727880 TCGAATCGTTTTAGCCGTTGG 59.272 47.619 1.52 0.00 0.00 3.77
754 755 2.783316 GCTCGAATCGTTTTAGCCGTTG 60.783 50.000 1.52 0.00 0.00 4.10
755 756 1.392510 GCTCGAATCGTTTTAGCCGTT 59.607 47.619 1.52 0.00 0.00 4.44
756 757 0.997196 GCTCGAATCGTTTTAGCCGT 59.003 50.000 1.52 0.00 0.00 5.68
757 758 0.044161 CGCTCGAATCGTTTTAGCCG 60.044 55.000 1.52 0.00 0.00 5.52
758 759 0.315140 GCGCTCGAATCGTTTTAGCC 60.315 55.000 0.00 0.00 0.00 3.93
759 760 0.645868 AGCGCTCGAATCGTTTTAGC 59.354 50.000 2.64 3.14 0.00 3.09
760 761 3.789756 TCTTAGCGCTCGAATCGTTTTAG 59.210 43.478 16.34 0.00 0.00 1.85
761 762 3.761657 TCTTAGCGCTCGAATCGTTTTA 58.238 40.909 16.34 0.00 0.00 1.52
762 763 2.602878 TCTTAGCGCTCGAATCGTTTT 58.397 42.857 16.34 0.00 0.00 2.43
763 764 2.273370 TCTTAGCGCTCGAATCGTTT 57.727 45.000 16.34 0.00 0.00 3.60
764 765 2.120232 CATCTTAGCGCTCGAATCGTT 58.880 47.619 16.34 5.24 0.00 3.85
765 766 1.600663 CCATCTTAGCGCTCGAATCGT 60.601 52.381 16.34 0.00 0.00 3.73
766 767 1.056103 CCATCTTAGCGCTCGAATCG 58.944 55.000 16.34 0.00 0.00 3.34
767 768 1.000163 TCCCATCTTAGCGCTCGAATC 60.000 52.381 16.34 0.00 0.00 2.52
768 769 1.040646 TCCCATCTTAGCGCTCGAAT 58.959 50.000 16.34 2.25 0.00 3.34
769 770 0.102481 GTCCCATCTTAGCGCTCGAA 59.898 55.000 16.34 1.81 0.00 3.71
770 771 1.734137 GTCCCATCTTAGCGCTCGA 59.266 57.895 16.34 13.10 0.00 4.04
771 772 1.658717 CGTCCCATCTTAGCGCTCG 60.659 63.158 16.34 6.76 0.00 5.03
772 773 1.300233 CCGTCCCATCTTAGCGCTC 60.300 63.158 16.34 0.00 0.00 5.03
773 774 2.815308 CCGTCCCATCTTAGCGCT 59.185 61.111 17.26 17.26 0.00 5.92
774 775 2.967615 GCCGTCCCATCTTAGCGC 60.968 66.667 0.00 0.00 0.00 5.92
775 776 2.280186 GGCCGTCCCATCTTAGCG 60.280 66.667 0.00 0.00 0.00 4.26
776 777 2.280186 CGGCCGTCCCATCTTAGC 60.280 66.667 19.50 0.00 0.00 3.09
777 778 0.177141 TTTCGGCCGTCCCATCTTAG 59.823 55.000 27.15 0.00 0.00 2.18
778 779 0.614294 TTTTCGGCCGTCCCATCTTA 59.386 50.000 27.15 0.00 0.00 2.10
779 780 0.958876 GTTTTCGGCCGTCCCATCTT 60.959 55.000 27.15 0.00 0.00 2.40
780 781 1.376812 GTTTTCGGCCGTCCCATCT 60.377 57.895 27.15 0.00 0.00 2.90
781 782 2.746803 CGTTTTCGGCCGTCCCATC 61.747 63.158 27.15 10.94 39.94 3.51
782 783 2.744709 CGTTTTCGGCCGTCCCAT 60.745 61.111 27.15 0.00 39.94 4.00
783 784 3.926318 TCGTTTTCGGCCGTCCCA 61.926 61.111 27.15 1.49 44.25 4.37
784 785 3.417224 GTCGTTTTCGGCCGTCCC 61.417 66.667 27.15 10.75 42.59 4.46
791 792 2.268298 CCCATAGTGAGTCGTTTTCGG 58.732 52.381 0.00 0.00 44.25 4.30
792 793 2.955614 ACCCATAGTGAGTCGTTTTCG 58.044 47.619 0.00 0.00 45.64 3.46
793 794 5.684550 AAAACCCATAGTGAGTCGTTTTC 57.315 39.130 0.00 0.00 29.87 2.29
824 825 1.952296 GCTGCTCAAATCCCATAGTGG 59.048 52.381 0.00 0.00 37.25 4.00
825 826 2.617308 CAGCTGCTCAAATCCCATAGTG 59.383 50.000 0.00 0.00 0.00 2.74
826 827 2.928334 CAGCTGCTCAAATCCCATAGT 58.072 47.619 0.00 0.00 0.00 2.12
827 828 1.607628 GCAGCTGCTCAAATCCCATAG 59.392 52.381 31.33 0.00 38.21 2.23
828 829 1.683943 GCAGCTGCTCAAATCCCATA 58.316 50.000 31.33 0.00 38.21 2.74
829 830 1.041447 GGCAGCTGCTCAAATCCCAT 61.041 55.000 35.82 0.00 41.70 4.00
830 831 1.679977 GGCAGCTGCTCAAATCCCA 60.680 57.895 35.82 0.00 41.70 4.37
831 832 1.379576 AGGCAGCTGCTCAAATCCC 60.380 57.895 35.82 17.96 41.70 3.85
832 833 0.394080 AGAGGCAGCTGCTCAAATCC 60.394 55.000 35.82 18.70 41.70 3.01
833 834 2.211806 CTAGAGGCAGCTGCTCAAATC 58.788 52.381 35.82 24.07 41.70 2.17
834 835 1.558756 ACTAGAGGCAGCTGCTCAAAT 59.441 47.619 35.82 20.14 41.70 2.32
835 836 0.979665 ACTAGAGGCAGCTGCTCAAA 59.020 50.000 35.82 20.56 41.70 2.69
836 837 1.753649 CTACTAGAGGCAGCTGCTCAA 59.246 52.381 35.82 18.74 41.70 3.02
837 838 1.397672 CTACTAGAGGCAGCTGCTCA 58.602 55.000 35.82 18.11 41.70 4.26
838 839 0.673437 CCTACTAGAGGCAGCTGCTC 59.327 60.000 35.82 28.40 38.96 4.26
839 840 2.819477 CCTACTAGAGGCAGCTGCT 58.181 57.895 35.82 22.72 38.96 4.24
847 848 6.660847 CTGCTCACTCAGAACCTACTAGAGG 61.661 52.000 0.00 1.43 42.87 3.69
848 849 4.265893 TGCTCACTCAGAACCTACTAGAG 58.734 47.826 0.00 0.00 0.00 2.43
849 850 4.265893 CTGCTCACTCAGAACCTACTAGA 58.734 47.826 0.00 0.00 36.19 2.43
850 851 3.380004 CCTGCTCACTCAGAACCTACTAG 59.620 52.174 0.00 0.00 36.19 2.57
851 852 3.357203 CCTGCTCACTCAGAACCTACTA 58.643 50.000 0.00 0.00 36.19 1.82
852 853 2.175202 CCTGCTCACTCAGAACCTACT 58.825 52.381 0.00 0.00 36.19 2.57
853 854 1.404851 GCCTGCTCACTCAGAACCTAC 60.405 57.143 0.00 0.00 36.19 3.18
854 855 0.898320 GCCTGCTCACTCAGAACCTA 59.102 55.000 0.00 0.00 36.19 3.08
855 856 1.676384 GCCTGCTCACTCAGAACCT 59.324 57.895 0.00 0.00 36.19 3.50
856 857 1.376553 GGCCTGCTCACTCAGAACC 60.377 63.158 0.00 0.00 36.19 3.62
857 858 0.250467 TTGGCCTGCTCACTCAGAAC 60.250 55.000 3.32 0.00 36.19 3.01
858 859 0.035881 CTTGGCCTGCTCACTCAGAA 59.964 55.000 3.32 0.00 36.19 3.02
859 860 1.675801 CTTGGCCTGCTCACTCAGA 59.324 57.895 3.32 0.00 36.19 3.27
860 861 1.376942 CCTTGGCCTGCTCACTCAG 60.377 63.158 3.32 0.00 0.00 3.35
861 862 2.752358 CCTTGGCCTGCTCACTCA 59.248 61.111 3.32 0.00 0.00 3.41
862 863 2.749441 GCCTTGGCCTGCTCACTC 60.749 66.667 3.32 0.00 0.00 3.51
863 864 4.357279 GGCCTTGGCCTGCTCACT 62.357 66.667 22.47 0.00 0.00 3.41
866 867 4.722700 TTCGGCCTTGGCCTGCTC 62.723 66.667 25.99 2.20 0.00 4.26
867 868 4.729918 CTTCGGCCTTGGCCTGCT 62.730 66.667 25.99 0.00 0.00 4.24
869 870 3.058160 CACTTCGGCCTTGGCCTG 61.058 66.667 25.99 19.28 0.00 4.85
870 871 4.351054 CCACTTCGGCCTTGGCCT 62.351 66.667 25.99 6.72 0.00 5.19
871 872 3.262448 TACCACTTCGGCCTTGGCC 62.262 63.158 20.15 20.15 39.03 5.36
872 873 1.745489 CTACCACTTCGGCCTTGGC 60.745 63.158 0.00 2.49 39.03 4.52
873 874 0.323629 TTCTACCACTTCGGCCTTGG 59.676 55.000 0.00 4.49 39.03 3.61
874 875 1.726853 CTTCTACCACTTCGGCCTTG 58.273 55.000 0.00 0.00 39.03 3.61
875 876 0.036294 GCTTCTACCACTTCGGCCTT 60.036 55.000 0.00 0.00 39.03 4.35
876 877 1.597461 GCTTCTACCACTTCGGCCT 59.403 57.895 0.00 0.00 39.03 5.19
877 878 1.449778 GGCTTCTACCACTTCGGCC 60.450 63.158 0.00 0.00 39.03 6.13
878 879 1.449778 GGGCTTCTACCACTTCGGC 60.450 63.158 0.00 0.00 39.03 5.54
879 880 0.541863 ATGGGCTTCTACCACTTCGG 59.458 55.000 0.00 0.00 41.58 4.30
880 881 1.656652 CATGGGCTTCTACCACTTCG 58.343 55.000 0.00 0.00 41.58 3.79
881 882 1.282157 ACCATGGGCTTCTACCACTTC 59.718 52.381 18.09 0.00 41.58 3.01
882 883 1.282157 GACCATGGGCTTCTACCACTT 59.718 52.381 18.09 0.00 41.58 3.16
883 884 0.912486 GACCATGGGCTTCTACCACT 59.088 55.000 18.09 0.00 41.58 4.00
884 885 0.618458 TGACCATGGGCTTCTACCAC 59.382 55.000 21.02 0.00 41.58 4.16
885 886 0.911769 CTGACCATGGGCTTCTACCA 59.088 55.000 21.02 0.00 43.22 3.25
886 887 0.912486 ACTGACCATGGGCTTCTACC 59.088 55.000 21.02 0.00 0.00 3.18
887 888 1.134371 GGACTGACCATGGGCTTCTAC 60.134 57.143 21.02 5.75 38.79 2.59
888 889 1.204146 GGACTGACCATGGGCTTCTA 58.796 55.000 21.02 0.00 38.79 2.10
889 890 0.842030 TGGACTGACCATGGGCTTCT 60.842 55.000 21.02 0.00 44.64 2.85
890 891 1.685224 TGGACTGACCATGGGCTTC 59.315 57.895 21.02 15.02 44.64 3.86
891 892 3.920817 TGGACTGACCATGGGCTT 58.079 55.556 21.02 5.39 44.64 4.35
899 900 1.810532 CTCTACGGCTGGACTGACC 59.189 63.158 0.00 0.00 39.54 4.02
900 901 1.139947 GCTCTACGGCTGGACTGAC 59.860 63.158 0.00 0.00 0.00 3.51
901 902 1.304134 TGCTCTACGGCTGGACTGA 60.304 57.895 0.00 0.00 0.00 3.41
902 903 1.140589 CTGCTCTACGGCTGGACTG 59.859 63.158 0.00 0.00 0.00 3.51
903 904 1.000771 TCTGCTCTACGGCTGGACT 60.001 57.895 0.00 0.00 33.09 3.85
904 905 1.435515 CTCTGCTCTACGGCTGGAC 59.564 63.158 0.00 0.00 33.09 4.02
905 906 2.418910 GCTCTGCTCTACGGCTGGA 61.419 63.158 0.00 0.00 33.09 3.86
906 907 2.105930 GCTCTGCTCTACGGCTGG 59.894 66.667 0.00 0.00 33.09 4.85
907 908 1.226916 CTGCTCTGCTCTACGGCTG 60.227 63.158 0.00 0.00 0.00 4.85
908 909 1.379176 TCTGCTCTGCTCTACGGCT 60.379 57.895 0.00 0.00 0.00 5.52
909 910 1.065600 CTCTGCTCTGCTCTACGGC 59.934 63.158 0.00 0.00 0.00 5.68
910 911 1.065600 GCTCTGCTCTGCTCTACGG 59.934 63.158 0.00 0.00 0.00 4.02
911 912 0.248580 CTGCTCTGCTCTGCTCTACG 60.249 60.000 0.00 0.00 0.00 3.51
912 913 1.066002 CTCTGCTCTGCTCTGCTCTAC 59.934 57.143 0.00 0.00 0.00 2.59
913 914 1.391577 CTCTGCTCTGCTCTGCTCTA 58.608 55.000 0.00 0.00 0.00 2.43
914 915 1.324740 CCTCTGCTCTGCTCTGCTCT 61.325 60.000 0.00 0.00 0.00 4.09
915 916 1.142314 CCTCTGCTCTGCTCTGCTC 59.858 63.158 0.00 0.00 0.00 4.26
1015 1033 1.079197 TAGTCGTCGTAGTCGGCCA 60.079 57.895 2.24 0.00 45.98 5.36
1171 1197 0.592148 CCGTCGGGATAGTAGCAGAC 59.408 60.000 2.34 3.95 34.06 3.51
1197 1223 5.580691 TGAAACATAGTCCTTGTATTCAGCG 59.419 40.000 0.00 0.00 0.00 5.18
1198 1224 6.595716 ACTGAAACATAGTCCTTGTATTCAGC 59.404 38.462 18.09 0.00 40.71 4.26
1248 1277 2.997897 AGAGCCCTCACCACGGAC 60.998 66.667 0.00 0.00 0.00 4.79
1317 1359 1.665599 GTCGAACGCCGGGAAAGAA 60.666 57.895 2.18 0.00 39.14 2.52
1320 1362 2.048877 GAGTCGAACGCCGGGAAA 60.049 61.111 2.18 0.00 39.14 3.13
1385 1747 4.554036 GGGATGCCTCCAGGACGC 62.554 72.222 10.44 3.54 44.08 5.19
1387 1749 2.276309 CTTGGGGATGCCTCCAGGAC 62.276 65.000 10.44 0.00 44.08 3.85
1404 1766 4.946157 CAGTCATCCTGCAGGTATTTTCTT 59.054 41.667 31.58 8.98 33.59 2.52
1405 1767 4.521146 CAGTCATCCTGCAGGTATTTTCT 58.479 43.478 31.58 19.11 33.59 2.52
1406 1768 4.889832 CAGTCATCCTGCAGGTATTTTC 57.110 45.455 31.58 17.38 33.59 2.29
1506 1880 4.899239 GAGGGCGGCACCTCGATG 62.899 72.222 17.77 0.00 46.81 3.84
1521 1895 4.615949 CGAGATTATTGGACAGGTCAGAG 58.384 47.826 1.41 0.00 0.00 3.35
1547 1921 0.251341 TTTCTTCCCCTCAAGCAGCC 60.251 55.000 0.00 0.00 0.00 4.85
1648 2022 0.182299 GGCCCATAGAGCTCTGCTTT 59.818 55.000 26.78 5.52 39.88 3.51
1884 2267 0.107703 CGGCATCTAGACCCTTGCAA 60.108 55.000 15.91 0.00 36.82 4.08
1954 2337 2.741930 CGATGCAAGCGTCTCTCAA 58.258 52.632 12.00 0.00 43.21 3.02
2090 2485 3.609853 TCAGTACAAGGCAACATGATCC 58.390 45.455 0.00 0.00 37.52 3.36
2107 2502 7.861629 TCCCAAATATATGTGAAGACTTCAGT 58.138 34.615 18.24 12.26 41.01 3.41
2163 2559 4.931914 TCACATATAGGTAGGTCTAGCCC 58.068 47.826 3.86 0.00 38.26 5.19
2200 2662 3.855689 AAATATCAGCACAGGCACAAC 57.144 42.857 0.00 0.00 44.61 3.32
2205 2667 7.108847 AGATAAGGATAAATATCAGCACAGGC 58.891 38.462 3.07 0.00 41.61 4.85
2206 2668 9.160496 GAAGATAAGGATAAATATCAGCACAGG 57.840 37.037 3.07 0.00 34.40 4.00
2207 2669 9.941325 AGAAGATAAGGATAAATATCAGCACAG 57.059 33.333 3.07 0.00 34.40 3.66
2261 2731 9.956720 CCTGGCTAAAATACAGATTTATTTGAG 57.043 33.333 0.00 0.00 34.68 3.02
2264 2734 8.539117 AGCCTGGCTAAAATACAGATTTATTT 57.461 30.769 21.98 0.00 36.99 1.40
2283 2753 5.788450 CCTATCTAGTTGATGTTAGCCTGG 58.212 45.833 0.00 0.00 36.65 4.45
2389 2859 5.427378 TGCATTAAACTGATCCATTCTCGA 58.573 37.500 0.00 0.00 0.00 4.04
2486 2958 3.688185 GTGTGACTGATTGCACTGATCAT 59.312 43.478 0.00 0.00 36.05 2.45
2490 2962 1.140652 TGGTGTGACTGATTGCACTGA 59.859 47.619 0.00 0.00 36.05 3.41
2544 3017 0.823356 GTGTGCCCTGTCATGTTGGT 60.823 55.000 0.00 0.00 0.00 3.67
2792 3266 0.869454 GAGCGAGCGAGATGTTCAGG 60.869 60.000 0.00 0.00 0.00 3.86
2862 3336 4.157120 GGCCTACCACATCGGCGT 62.157 66.667 6.85 0.00 44.68 5.68
2892 3366 2.037136 CCGAGCAAGTCTGGCAAGG 61.037 63.158 1.07 0.11 0.00 3.61
2893 3367 2.037136 CCCGAGCAAGTCTGGCAAG 61.037 63.158 1.07 0.00 0.00 4.01
2894 3368 2.032528 CCCGAGCAAGTCTGGCAA 59.967 61.111 1.07 0.00 0.00 4.52
2895 3369 3.241530 ACCCGAGCAAGTCTGGCA 61.242 61.111 1.07 0.00 32.74 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.