Multiple sequence alignment - TraesCS2B01G572400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G572400 chr2B 100.000 3593 0 0 1 3593 762119358 762115766 0.000000e+00 6636.0
1 TraesCS2B01G572400 chr2B 77.500 120 15 4 3076 3184 309115096 309114978 1.080000e-05 62.1
2 TraesCS2B01G572400 chr2A 92.049 1874 131 10 829 2692 753106346 753104481 0.000000e+00 2619.0
3 TraesCS2B01G572400 chr2A 83.403 476 47 17 315 785 753107127 753106679 2.580000e-111 412.0
4 TraesCS2B01G572400 chr2A 87.192 203 19 5 86 284 753107769 753107570 1.300000e-54 224.0
5 TraesCS2B01G572400 chr2A 97.015 67 2 0 780 846 753106707 753106641 2.930000e-21 113.0
6 TraesCS2B01G572400 chr2D 91.235 1814 133 8 881 2692 621359946 621358157 0.000000e+00 2446.0
7 TraesCS2B01G572400 chr2D 91.304 414 34 2 3181 3593 621355839 621355427 6.730000e-157 564.0
8 TraesCS2B01G572400 chr2D 90.090 222 19 3 566 785 621364488 621364268 5.870000e-73 285.0
9 TraesCS2B01G572400 chr2D 87.705 244 26 4 315 555 621364713 621364471 7.600000e-72 281.0
10 TraesCS2B01G572400 chr2D 88.119 202 18 2 86 284 621365357 621365159 6.000000e-58 235.0
11 TraesCS2B01G572400 chr2D 89.157 83 4 3 806 883 621364270 621364188 8.210000e-17 99.0
12 TraesCS2B01G572400 chrUn 86.613 1479 173 15 1086 2560 30095184 30096641 0.000000e+00 1611.0
13 TraesCS2B01G572400 chr4B 86.364 1474 178 13 1089 2560 667426659 667428111 0.000000e+00 1587.0
14 TraesCS2B01G572400 chr4B 84.956 1489 196 14 1089 2560 649353938 649355415 0.000000e+00 1483.0
15 TraesCS2B01G572400 chr4B 81.246 1573 248 26 1004 2560 110228754 110230295 0.000000e+00 1227.0
16 TraesCS2B01G572400 chr5A 85.995 1478 180 17 1089 2560 706653341 706654797 0.000000e+00 1557.0
17 TraesCS2B01G572400 chr4A 81.341 1581 235 32 1001 2560 507592566 507594107 0.000000e+00 1230.0
18 TraesCS2B01G572400 chr7B 80.108 1478 263 20 1093 2559 537517239 537515782 0.000000e+00 1072.0
19 TraesCS2B01G572400 chr7B 74.576 236 49 6 2345 2570 503108006 503108240 3.820000e-15 93.5
20 TraesCS2B01G572400 chr7B 73.707 232 46 9 2351 2570 654251547 654251319 3.850000e-10 76.8
21 TraesCS2B01G572400 chr7A 76.233 223 42 5 2351 2563 675575458 675575679 1.360000e-19 108.0
22 TraesCS2B01G572400 chr7A 74.892 231 45 8 2351 2570 517894256 517894028 3.820000e-15 93.5
23 TraesCS2B01G572400 chr7A 73.009 226 44 10 2351 2563 518504336 518504115 2.990000e-06 63.9
24 TraesCS2B01G572400 chr6D 76.650 197 33 8 2993 3178 464670352 464670546 2.950000e-16 97.1
25 TraesCS2B01G572400 chr6D 80.172 116 13 6 3076 3181 471549875 471549990 1.070000e-10 78.7
26 TraesCS2B01G572400 chr5B 87.209 86 6 5 1 83 543228731 543228814 3.820000e-15 93.5
27 TraesCS2B01G572400 chr7D 91.803 61 4 1 2994 3053 254321780 254321720 2.300000e-12 84.2
28 TraesCS2B01G572400 chr7D 93.878 49 3 0 3135 3183 159411998 159411950 1.380000e-09 75.0
29 TraesCS2B01G572400 chr7D 72.857 210 46 6 2364 2563 477866861 477867069 1.080000e-05 62.1
30 TraesCS2B01G572400 chr1A 100.000 35 0 0 3149 3183 39900253 39900219 8.330000e-07 65.8
31 TraesCS2B01G572400 chr5D 75.912 137 22 6 3058 3183 418625282 418625146 3.870000e-05 60.2
32 TraesCS2B01G572400 chr1D 88.235 51 5 1 631 681 46098619 46098570 3.870000e-05 60.2
33 TraesCS2B01G572400 chr3D 100.000 31 0 0 3153 3183 580131539 580131509 1.390000e-04 58.4
34 TraesCS2B01G572400 chr3D 90.244 41 4 0 2994 3034 68832633 68832673 2.000000e-03 54.7
35 TraesCS2B01G572400 chr3B 100.000 30 0 0 3155 3184 166509812 166509841 5.010000e-04 56.5
36 TraesCS2B01G572400 chr3A 94.444 36 1 1 3152 3186 650447053 650447018 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G572400 chr2B 762115766 762119358 3592 True 6636 6636 100.00000 1 3593 1 chr2B.!!$R2 3592
1 TraesCS2B01G572400 chr2A 753104481 753107769 3288 True 842 2619 89.91475 86 2692 4 chr2A.!!$R1 2606
2 TraesCS2B01G572400 chr2D 621355427 621359946 4519 True 1505 2446 91.26950 881 3593 2 chr2D.!!$R1 2712
3 TraesCS2B01G572400 chr2D 621364188 621365357 1169 True 225 285 88.76775 86 883 4 chr2D.!!$R2 797
4 TraesCS2B01G572400 chrUn 30095184 30096641 1457 False 1611 1611 86.61300 1086 2560 1 chrUn.!!$F1 1474
5 TraesCS2B01G572400 chr4B 667426659 667428111 1452 False 1587 1587 86.36400 1089 2560 1 chr4B.!!$F3 1471
6 TraesCS2B01G572400 chr4B 649353938 649355415 1477 False 1483 1483 84.95600 1089 2560 1 chr4B.!!$F2 1471
7 TraesCS2B01G572400 chr4B 110228754 110230295 1541 False 1227 1227 81.24600 1004 2560 1 chr4B.!!$F1 1556
8 TraesCS2B01G572400 chr5A 706653341 706654797 1456 False 1557 1557 85.99500 1089 2560 1 chr5A.!!$F1 1471
9 TraesCS2B01G572400 chr4A 507592566 507594107 1541 False 1230 1230 81.34100 1001 2560 1 chr4A.!!$F1 1559
10 TraesCS2B01G572400 chr7B 537515782 537517239 1457 True 1072 1072 80.10800 1093 2559 1 chr7B.!!$R1 1466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.028902 GTGTCGTGCAGTTTCCCAAC 59.971 55.0 0.0 0.0 0.00 3.77 F
968 1710 0.179150 GTACAGCACTCTCGCTCAGG 60.179 60.0 0.0 0.0 41.38 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 2528 0.037605 ACCGTCCTTCCGATGTTGAC 60.038 55.0 0.0 0.0 0.0 3.18 R
2926 5192 0.033642 TACACGCCACGACAATCCAA 59.966 50.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.796110 ATATGAAATAGCCACACCCTGT 57.204 40.909 0.00 0.00 28.50 4.00
47 48 2.969821 TGAAATAGCCACACCCTGTT 57.030 45.000 0.00 0.00 0.00 3.16
48 49 3.237268 TGAAATAGCCACACCCTGTTT 57.763 42.857 0.00 0.00 0.00 2.83
49 50 4.374689 TGAAATAGCCACACCCTGTTTA 57.625 40.909 0.00 0.00 0.00 2.01
50 51 4.331968 TGAAATAGCCACACCCTGTTTAG 58.668 43.478 0.00 0.00 0.00 1.85
51 52 3.366052 AATAGCCACACCCTGTTTAGG 57.634 47.619 0.00 0.00 44.18 2.69
60 61 2.540145 CCTGTTTAGGGTGTCGTGC 58.460 57.895 0.00 0.00 40.63 5.34
61 62 0.250124 CCTGTTTAGGGTGTCGTGCA 60.250 55.000 0.00 0.00 40.63 4.57
62 63 1.148310 CTGTTTAGGGTGTCGTGCAG 58.852 55.000 0.00 0.00 0.00 4.41
63 64 0.466543 TGTTTAGGGTGTCGTGCAGT 59.533 50.000 0.00 0.00 0.00 4.40
64 65 1.134340 TGTTTAGGGTGTCGTGCAGTT 60.134 47.619 0.00 0.00 0.00 3.16
65 66 1.944709 GTTTAGGGTGTCGTGCAGTTT 59.055 47.619 0.00 0.00 0.00 2.66
66 67 1.873698 TTAGGGTGTCGTGCAGTTTC 58.126 50.000 0.00 0.00 0.00 2.78
67 68 0.034337 TAGGGTGTCGTGCAGTTTCC 59.966 55.000 0.00 0.00 0.00 3.13
68 69 2.258726 GGGTGTCGTGCAGTTTCCC 61.259 63.158 0.00 0.00 0.00 3.97
69 70 1.525077 GGTGTCGTGCAGTTTCCCA 60.525 57.895 0.00 0.00 0.00 4.37
70 71 1.098712 GGTGTCGTGCAGTTTCCCAA 61.099 55.000 0.00 0.00 0.00 4.12
71 72 0.028902 GTGTCGTGCAGTTTCCCAAC 59.971 55.000 0.00 0.00 0.00 3.77
72 73 0.393132 TGTCGTGCAGTTTCCCAACA 60.393 50.000 0.00 0.00 35.05 3.33
73 74 0.736053 GTCGTGCAGTTTCCCAACAA 59.264 50.000 0.00 0.00 35.05 2.83
74 75 1.336755 GTCGTGCAGTTTCCCAACAAT 59.663 47.619 0.00 0.00 35.05 2.71
75 76 2.550606 GTCGTGCAGTTTCCCAACAATA 59.449 45.455 0.00 0.00 35.05 1.90
76 77 2.550606 TCGTGCAGTTTCCCAACAATAC 59.449 45.455 0.00 0.00 35.05 1.89
77 78 2.664424 CGTGCAGTTTCCCAACAATACG 60.664 50.000 0.00 0.00 35.05 3.06
78 79 2.292292 GTGCAGTTTCCCAACAATACGT 59.708 45.455 0.00 0.00 35.05 3.57
79 80 2.550606 TGCAGTTTCCCAACAATACGTC 59.449 45.455 0.00 0.00 35.05 4.34
80 81 2.812011 GCAGTTTCCCAACAATACGTCT 59.188 45.455 0.00 0.00 35.05 4.18
81 82 3.252458 GCAGTTTCCCAACAATACGTCTT 59.748 43.478 0.00 0.00 35.05 3.01
82 83 4.453136 GCAGTTTCCCAACAATACGTCTTA 59.547 41.667 0.00 0.00 35.05 2.10
83 84 5.616204 GCAGTTTCCCAACAATACGTCTTAC 60.616 44.000 0.00 0.00 35.05 2.34
84 85 5.467399 CAGTTTCCCAACAATACGTCTTACA 59.533 40.000 0.00 0.00 35.05 2.41
109 110 1.680735 CAGCGAGAGTGGCTAGAGATT 59.319 52.381 0.00 0.00 39.08 2.40
125 126 3.522750 AGAGATTGAGAAGGCCTTGTGAT 59.477 43.478 26.25 15.05 0.00 3.06
130 131 3.149196 TGAGAAGGCCTTGTGATGTTTC 58.851 45.455 26.25 4.71 0.00 2.78
132 133 1.200020 GAAGGCCTTGTGATGTTTCGG 59.800 52.381 26.25 0.00 0.00 4.30
133 134 1.212751 GGCCTTGTGATGTTTCGGC 59.787 57.895 0.00 0.00 36.83 5.54
134 135 1.212751 GCCTTGTGATGTTTCGGCC 59.787 57.895 0.00 0.00 0.00 6.13
184 185 0.909623 TAGCCCTGAAAGTGTAGGCC 59.090 55.000 0.00 0.00 45.00 5.19
204 205 5.043657 AGGCCCATAATTAACAAACCTAGGT 60.044 40.000 9.21 9.21 0.00 3.08
214 215 7.967890 TTAACAAACCTAGGTACTACAAAGC 57.032 36.000 16.67 0.00 41.75 3.51
217 218 3.486653 ACCTAGGTACTACAAAGCCCT 57.513 47.619 14.41 0.00 41.75 5.19
223 227 7.793222 ACCTAGGTACTACAAAGCCCTATAAAT 59.207 37.037 14.41 0.00 41.75 1.40
234 238 4.154942 AGCCCTATAAATTCAAGCCCATG 58.845 43.478 0.00 0.00 0.00 3.66
235 239 3.306294 GCCCTATAAATTCAAGCCCATGC 60.306 47.826 0.00 0.00 37.95 4.06
286 320 9.480053 ACATGAACAAAATAAAAACTCCATGAG 57.520 29.630 0.00 0.00 33.84 2.90
287 321 9.695526 CATGAACAAAATAAAAACTCCATGAGA 57.304 29.630 0.00 0.00 33.32 3.27
326 746 9.297586 GGTGGCTTAGTAAATTTATAAAGTTGC 57.702 33.333 18.53 17.10 0.00 4.17
343 763 5.840940 AGTTGCTACATACAAGAAACGAC 57.159 39.130 0.13 0.00 37.54 4.34
383 803 8.655935 TCTAGTCCTCATATTCTGATGCATAA 57.344 34.615 0.00 0.00 32.10 1.90
390 810 9.752961 CCTCATATTCTGATGCATAAGATAGAG 57.247 37.037 14.83 16.53 32.10 2.43
434 854 2.753989 TGCACGAAATATTCCATGCG 57.246 45.000 11.13 0.00 39.75 4.73
443 863 2.275134 TATTCCATGCGTGCATCCAT 57.725 45.000 3.96 0.31 33.90 3.41
455 876 0.657840 GCATCCATAGTGTTCACCGC 59.342 55.000 0.00 0.00 0.00 5.68
502 923 9.494271 TCTATGTTGAGACAAAATATATCTGGC 57.506 33.333 0.00 0.00 39.66 4.85
507 928 6.582636 TGAGACAAAATATATCTGGCTTCGT 58.417 36.000 4.95 0.00 0.00 3.85
509 930 7.011389 TGAGACAAAATATATCTGGCTTCGTTG 59.989 37.037 4.95 0.00 0.00 4.10
511 932 6.785191 ACAAAATATATCTGGCTTCGTTGTG 58.215 36.000 0.00 0.00 0.00 3.33
513 934 7.551262 ACAAAATATATCTGGCTTCGTTGTGTA 59.449 33.333 0.00 0.00 0.00 2.90
534 955 7.751348 TGTGTAACATAATGTTTTATTGCGTCC 59.249 33.333 0.00 0.00 45.67 4.79
540 961 8.921670 ACATAATGTTTTATTGCGTCCTTTTTC 58.078 29.630 0.00 0.00 0.00 2.29
541 962 9.139174 CATAATGTTTTATTGCGTCCTTTTTCT 57.861 29.630 0.00 0.00 0.00 2.52
542 963 7.637709 AATGTTTTATTGCGTCCTTTTTCTC 57.362 32.000 0.00 0.00 0.00 2.87
543 964 6.137794 TGTTTTATTGCGTCCTTTTTCTCA 57.862 33.333 0.00 0.00 0.00 3.27
544 965 6.744112 TGTTTTATTGCGTCCTTTTTCTCAT 58.256 32.000 0.00 0.00 0.00 2.90
545 966 7.206687 TGTTTTATTGCGTCCTTTTTCTCATT 58.793 30.769 0.00 0.00 0.00 2.57
546 967 7.708752 TGTTTTATTGCGTCCTTTTTCTCATTT 59.291 29.630 0.00 0.00 0.00 2.32
547 968 7.867445 TTTATTGCGTCCTTTTTCTCATTTC 57.133 32.000 0.00 0.00 0.00 2.17
548 969 4.909696 TTGCGTCCTTTTTCTCATTTCA 57.090 36.364 0.00 0.00 0.00 2.69
549 970 4.909696 TGCGTCCTTTTTCTCATTTCAA 57.090 36.364 0.00 0.00 0.00 2.69
550 971 5.255710 TGCGTCCTTTTTCTCATTTCAAA 57.744 34.783 0.00 0.00 0.00 2.69
551 972 5.280945 TGCGTCCTTTTTCTCATTTCAAAG 58.719 37.500 0.00 0.00 0.00 2.77
552 973 5.163561 TGCGTCCTTTTTCTCATTTCAAAGT 60.164 36.000 0.00 0.00 0.00 2.66
553 974 5.748630 GCGTCCTTTTTCTCATTTCAAAGTT 59.251 36.000 0.00 0.00 0.00 2.66
554 975 6.255670 GCGTCCTTTTTCTCATTTCAAAGTTT 59.744 34.615 0.00 0.00 0.00 2.66
555 976 7.201522 GCGTCCTTTTTCTCATTTCAAAGTTTT 60.202 33.333 0.00 0.00 0.00 2.43
556 977 8.655970 CGTCCTTTTTCTCATTTCAAAGTTTTT 58.344 29.630 0.00 0.00 0.00 1.94
633 1055 8.715191 AGTGCACTTGTTTCAAAATGAATTTA 57.285 26.923 15.25 0.00 36.11 1.40
653 1075 9.691362 GAATTTACTGGTACACAATGAAACATT 57.309 29.630 0.00 0.00 0.00 2.71
772 1197 1.268589 ACGGATCTCACAATAGCGACG 60.269 52.381 0.00 0.00 0.00 5.12
773 1198 1.772182 GGATCTCACAATAGCGACGG 58.228 55.000 0.00 0.00 0.00 4.79
774 1199 1.337071 GGATCTCACAATAGCGACGGA 59.663 52.381 0.00 0.00 0.00 4.69
775 1200 2.223735 GGATCTCACAATAGCGACGGAA 60.224 50.000 0.00 0.00 0.00 4.30
776 1201 2.273370 TCTCACAATAGCGACGGAAC 57.727 50.000 0.00 0.00 0.00 3.62
777 1202 1.542472 TCTCACAATAGCGACGGAACA 59.458 47.619 0.00 0.00 0.00 3.18
778 1203 1.654105 CTCACAATAGCGACGGAACAC 59.346 52.381 0.00 0.00 0.00 3.32
779 1204 1.000052 TCACAATAGCGACGGAACACA 60.000 47.619 0.00 0.00 0.00 3.72
780 1205 1.999735 CACAATAGCGACGGAACACAT 59.000 47.619 0.00 0.00 0.00 3.21
781 1206 2.029244 CACAATAGCGACGGAACACATC 59.971 50.000 0.00 0.00 0.00 3.06
782 1207 2.094182 ACAATAGCGACGGAACACATCT 60.094 45.455 0.00 0.00 0.00 2.90
783 1208 2.493713 ATAGCGACGGAACACATCTC 57.506 50.000 0.00 0.00 0.00 2.75
784 1209 1.170442 TAGCGACGGAACACATCTCA 58.830 50.000 0.00 0.00 0.00 3.27
785 1210 0.388649 AGCGACGGAACACATCTCAC 60.389 55.000 0.00 0.00 0.00 3.51
786 1211 0.666274 GCGACGGAACACATCTCACA 60.666 55.000 0.00 0.00 0.00 3.58
787 1212 1.778334 CGACGGAACACATCTCACAA 58.222 50.000 0.00 0.00 0.00 3.33
788 1213 2.337583 CGACGGAACACATCTCACAAT 58.662 47.619 0.00 0.00 0.00 2.71
789 1214 3.507786 CGACGGAACACATCTCACAATA 58.492 45.455 0.00 0.00 0.00 1.90
790 1215 3.547868 CGACGGAACACATCTCACAATAG 59.452 47.826 0.00 0.00 0.00 1.73
791 1216 3.262420 ACGGAACACATCTCACAATAGC 58.738 45.455 0.00 0.00 0.00 2.97
792 1217 2.282555 CGGAACACATCTCACAATAGCG 59.717 50.000 0.00 0.00 0.00 4.26
793 1218 3.521560 GGAACACATCTCACAATAGCGA 58.478 45.455 0.00 0.00 0.00 4.93
794 1219 3.307242 GGAACACATCTCACAATAGCGAC 59.693 47.826 0.00 0.00 0.00 5.19
823 1248 4.217118 ACATCTCAGTGCAGAAAAATCACC 59.783 41.667 0.00 0.00 0.00 4.02
856 1594 4.271696 TCCCACTCATGACTTACTTGTG 57.728 45.455 0.00 0.00 0.00 3.33
931 1673 2.683933 TGGAACGGAGGGAGGAGC 60.684 66.667 0.00 0.00 0.00 4.70
932 1674 2.364448 GGAACGGAGGGAGGAGCT 60.364 66.667 0.00 0.00 0.00 4.09
933 1675 2.428085 GGAACGGAGGGAGGAGCTC 61.428 68.421 4.71 4.71 0.00 4.09
954 1696 7.721402 AGCTCCAGATAATTGAAGTAGTACAG 58.279 38.462 2.52 0.00 0.00 2.74
968 1710 0.179150 GTACAGCACTCTCGCTCAGG 60.179 60.000 0.00 0.00 41.38 3.86
975 1717 1.333636 ACTCTCGCTCAGGGGATTGG 61.334 60.000 0.00 0.00 33.95 3.16
980 1726 2.761465 GCTCAGGGGATTGGGGAGG 61.761 68.421 0.00 0.00 0.00 4.30
988 1734 1.416013 GGGATTGGGGAGGTCCAGATA 60.416 57.143 0.00 0.00 38.17 1.98
992 1738 3.951563 TTGGGGAGGTCCAGATAATTG 57.048 47.619 0.00 0.00 38.17 2.32
995 1741 3.459598 TGGGGAGGTCCAGATAATTGAAG 59.540 47.826 0.00 0.00 37.91 3.02
1124 1881 2.674420 CCTACGGGAGAAGATACCCAA 58.326 52.381 0.00 0.00 45.83 4.12
1160 1917 1.949547 GCAGAGCTCCAGCAACTTCAT 60.950 52.381 20.36 0.00 45.16 2.57
1242 2002 1.515020 GCTCTGCATCGTGACTCCT 59.485 57.895 0.00 0.00 0.00 3.69
1243 2003 0.527385 GCTCTGCATCGTGACTCCTC 60.527 60.000 0.00 0.00 0.00 3.71
1617 2380 1.443702 CAAGATCGTCGACGCCACA 60.444 57.895 32.19 16.33 39.60 4.17
1742 2505 1.743252 GGAAAGTCCAGCTCCTGCG 60.743 63.158 0.00 0.00 45.42 5.18
1812 2575 2.982130 GCCGTGGACATCCTCACT 59.018 61.111 0.00 0.00 36.82 3.41
1899 2662 2.964310 GCAGGCTCTCTTCCAGGCA 61.964 63.158 0.00 0.00 38.91 4.75
1912 2675 1.296715 CAGGCACTTTACCTCGGCT 59.703 57.895 0.00 0.00 34.60 5.52
2059 2822 1.910772 ACGCTGGAGGAAGTGCTCT 60.911 57.895 0.00 0.00 0.00 4.09
2164 2930 0.462759 CATCTTCTCCCGCTGGTTCC 60.463 60.000 0.00 0.00 0.00 3.62
2166 2932 2.528127 TTCTCCCGCTGGTTCCCA 60.528 61.111 0.00 0.00 0.00 4.37
2176 2942 2.355115 GGTTCCCAATGGACGGCT 59.645 61.111 0.00 0.00 41.57 5.52
2224 2990 1.296715 GGGTTCATGGACAGCGTCT 59.703 57.895 6.44 0.00 32.47 4.18
2308 3074 1.229625 TGGGATCAGCAGGGTGACT 60.230 57.895 2.94 0.00 0.00 3.41
2362 3134 1.496060 ATACGACTTCATGGGGCAGA 58.504 50.000 0.00 0.00 0.00 4.26
2403 3175 1.081242 GGCGTACGTGAACTTCCGA 60.081 57.895 17.90 0.00 0.00 4.55
2481 3271 2.183555 GAGCGGTACTTCGTGGGG 59.816 66.667 0.00 0.00 0.00 4.96
2508 3298 1.447838 GAGGCTCGCATCGGTGAAA 60.448 57.895 0.00 0.00 32.14 2.69
2532 3322 0.750850 CCGTGGATCCGACCAACTAT 59.249 55.000 7.39 0.00 41.87 2.12
2565 3355 4.615815 AGCATCCCGCCGCTGATC 62.616 66.667 0.00 0.00 44.04 2.92
2617 3407 3.803886 GCATGCATGTGCGAGAGA 58.196 55.556 26.79 0.00 45.83 3.10
2618 3408 2.092374 GCATGCATGTGCGAGAGAA 58.908 52.632 26.79 0.00 45.83 2.87
2626 3416 3.256558 CATGTGCGAGAGAAATCAGACA 58.743 45.455 0.00 0.00 0.00 3.41
2636 3426 6.950428 CGAGAGAAATCAGACAAATTAACACG 59.050 38.462 0.00 0.00 0.00 4.49
2643 3433 4.624024 TCAGACAAATTAACACGTCGATCC 59.376 41.667 0.00 0.00 33.56 3.36
2649 3439 4.649088 ATTAACACGTCGATCCTGATGA 57.351 40.909 0.00 0.00 0.00 2.92
2659 3449 2.490115 CGATCCTGATGAGCCTACTACC 59.510 54.545 0.00 0.00 0.00 3.18
2660 3450 1.982660 TCCTGATGAGCCTACTACCG 58.017 55.000 0.00 0.00 0.00 4.02
2672 3462 2.224233 CCTACTACCGGTCGAGATCAGA 60.224 54.545 12.40 0.00 0.00 3.27
2679 3469 2.123342 CGGTCGAGATCAGATTGCTTC 58.877 52.381 0.00 0.00 0.00 3.86
2690 4773 5.767816 TCAGATTGCTTCCATCATGAATG 57.232 39.130 0.00 0.00 34.93 2.67
2691 4774 5.442391 TCAGATTGCTTCCATCATGAATGA 58.558 37.500 0.00 0.00 41.70 2.57
2703 4786 7.147312 TCCATCATGAATGAACAAAACAGAAC 58.853 34.615 0.00 0.00 40.69 3.01
2707 4790 4.101942 TGAATGAACAAAACAGAACGTGC 58.898 39.130 0.00 0.00 0.00 5.34
2710 4793 5.689383 ATGAACAAAACAGAACGTGCTAT 57.311 34.783 0.00 0.00 0.00 2.97
2711 4794 5.090652 TGAACAAAACAGAACGTGCTATC 57.909 39.130 0.00 0.00 0.00 2.08
2712 4795 4.572795 TGAACAAAACAGAACGTGCTATCA 59.427 37.500 0.00 0.00 0.00 2.15
2714 4797 5.689383 ACAAAACAGAACGTGCTATCAAT 57.311 34.783 0.00 0.00 0.00 2.57
2716 4799 5.914635 ACAAAACAGAACGTGCTATCAATTG 59.085 36.000 0.00 0.00 0.00 2.32
2717 4800 5.689383 AAACAGAACGTGCTATCAATTGT 57.311 34.783 5.13 0.00 0.00 2.71
2718 4801 6.795098 AAACAGAACGTGCTATCAATTGTA 57.205 33.333 5.13 0.00 0.00 2.41
2719 4802 6.985188 AACAGAACGTGCTATCAATTGTAT 57.015 33.333 5.13 0.80 0.00 2.29
2721 4804 7.377766 ACAGAACGTGCTATCAATTGTATTT 57.622 32.000 5.13 0.00 0.00 1.40
2723 4806 6.624917 CAGAACGTGCTATCAATTGTATTTCG 59.375 38.462 5.13 7.55 0.00 3.46
2725 4808 4.873827 ACGTGCTATCAATTGTATTTCGGT 59.126 37.500 5.13 0.00 0.00 4.69
2726 4809 5.197549 CGTGCTATCAATTGTATTTCGGTG 58.802 41.667 5.13 0.00 0.00 4.94
2727 4810 5.006261 CGTGCTATCAATTGTATTTCGGTGA 59.994 40.000 5.13 0.00 0.00 4.02
2728 4811 6.422223 GTGCTATCAATTGTATTTCGGTGAG 58.578 40.000 5.13 0.00 0.00 3.51
2729 4812 5.007626 TGCTATCAATTGTATTTCGGTGAGC 59.992 40.000 5.13 3.30 0.00 4.26
2731 4814 3.680490 TCAATTGTATTTCGGTGAGCCA 58.320 40.909 5.13 0.00 34.09 4.75
2733 4816 4.704540 TCAATTGTATTTCGGTGAGCCATT 59.295 37.500 5.13 0.00 34.09 3.16
2735 4818 3.342377 TGTATTTCGGTGAGCCATTCA 57.658 42.857 0.00 0.00 34.09 2.57
2736 4819 3.884895 TGTATTTCGGTGAGCCATTCAT 58.115 40.909 0.00 0.00 38.29 2.57
2759 5025 3.448686 GTGATCGATGGTACTGGTGAAG 58.551 50.000 0.54 0.00 0.00 3.02
2761 5027 3.381590 TGATCGATGGTACTGGTGAAGAG 59.618 47.826 0.54 0.00 0.00 2.85
2764 5030 2.480416 CGATGGTACTGGTGAAGAGAGC 60.480 54.545 0.00 0.00 0.00 4.09
2765 5031 2.310779 TGGTACTGGTGAAGAGAGCT 57.689 50.000 0.00 0.00 0.00 4.09
2766 5032 3.451402 TGGTACTGGTGAAGAGAGCTA 57.549 47.619 0.00 0.00 0.00 3.32
2767 5033 3.357203 TGGTACTGGTGAAGAGAGCTAG 58.643 50.000 0.00 0.00 0.00 3.42
2768 5034 3.245300 TGGTACTGGTGAAGAGAGCTAGT 60.245 47.826 0.00 0.00 0.00 2.57
2769 5035 4.018688 TGGTACTGGTGAAGAGAGCTAGTA 60.019 45.833 0.00 0.00 0.00 1.82
2783 5049 5.940595 AGAGCTAGTAGTTGTTACGTTCTG 58.059 41.667 0.00 0.00 37.35 3.02
2795 5061 6.210287 TGTTACGTTCTGGGTTGAAATTTT 57.790 33.333 0.00 0.00 0.00 1.82
2797 5063 4.053469 ACGTTCTGGGTTGAAATTTTGG 57.947 40.909 0.00 0.00 0.00 3.28
2799 5065 4.081365 ACGTTCTGGGTTGAAATTTTGGTT 60.081 37.500 0.00 0.00 0.00 3.67
2800 5066 4.269844 CGTTCTGGGTTGAAATTTTGGTTG 59.730 41.667 0.00 0.00 0.00 3.77
2801 5067 4.414337 TCTGGGTTGAAATTTTGGTTGG 57.586 40.909 0.00 0.00 0.00 3.77
2802 5068 4.033709 TCTGGGTTGAAATTTTGGTTGGA 58.966 39.130 0.00 0.00 0.00 3.53
2803 5069 4.657969 TCTGGGTTGAAATTTTGGTTGGAT 59.342 37.500 0.00 0.00 0.00 3.41
2804 5070 5.841237 TCTGGGTTGAAATTTTGGTTGGATA 59.159 36.000 0.00 0.00 0.00 2.59
2821 5087 3.201290 GGATAGTGATGCTTGTGGTGAG 58.799 50.000 0.00 0.00 0.00 3.51
2834 5100 2.123428 GGTGAGGATGTGCATGCCC 61.123 63.158 16.68 9.06 0.00 5.36
2844 5110 1.341187 TGTGCATGCCCATTGAGATGA 60.341 47.619 16.68 0.00 35.16 2.92
2850 5116 3.836365 TGCCCATTGAGATGATAACGA 57.164 42.857 0.00 0.00 35.16 3.85
2873 5139 3.803082 CCAGTCGTGGCGCATTGG 61.803 66.667 10.83 0.29 36.89 3.16
2874 5140 4.465512 CAGTCGTGGCGCATTGGC 62.466 66.667 10.83 0.00 45.12 4.52
2903 5169 2.956964 GCGCACGCTAGCTAGGTG 60.957 66.667 25.84 25.84 38.26 4.00
2904 5170 2.490217 CGCACGCTAGCTAGGTGT 59.510 61.111 28.19 18.00 34.25 4.16
2905 5171 1.725665 CGCACGCTAGCTAGGTGTA 59.274 57.895 28.19 0.00 34.25 2.90
2906 5172 0.311165 CGCACGCTAGCTAGGTGTAT 59.689 55.000 28.19 4.94 34.25 2.29
2907 5173 1.663445 CGCACGCTAGCTAGGTGTATC 60.663 57.143 28.19 18.04 34.25 2.24
2908 5174 1.663445 GCACGCTAGCTAGGTGTATCG 60.663 57.143 28.19 21.52 34.25 2.92
2909 5175 1.069159 CACGCTAGCTAGGTGTATCGG 60.069 57.143 22.10 6.59 0.00 4.18
2910 5176 0.109689 CGCTAGCTAGGTGTATCGGC 60.110 60.000 22.10 4.40 0.00 5.54
2911 5177 1.249407 GCTAGCTAGGTGTATCGGCT 58.751 55.000 22.10 0.00 37.08 5.52
2912 5178 1.068194 GCTAGCTAGGTGTATCGGCTG 60.068 57.143 22.10 0.00 34.88 4.85
2914 5180 2.002505 AGCTAGGTGTATCGGCTGAT 57.997 50.000 13.70 13.70 38.67 2.90
2915 5181 3.156288 AGCTAGGTGTATCGGCTGATA 57.844 47.619 11.36 11.36 35.99 2.15
2916 5182 3.702792 AGCTAGGTGTATCGGCTGATAT 58.297 45.455 18.11 5.17 39.22 1.63
2924 5190 4.055360 TGTATCGGCTGATATTTTCACCG 58.945 43.478 18.11 0.00 43.95 4.94
2926 5192 1.134521 TCGGCTGATATTTTCACCGCT 60.135 47.619 0.00 0.00 43.11 5.52
2927 5193 1.670811 CGGCTGATATTTTCACCGCTT 59.329 47.619 0.00 0.00 39.99 4.68
2928 5194 2.539547 CGGCTGATATTTTCACCGCTTG 60.540 50.000 0.00 0.00 39.99 4.01
2929 5195 2.223572 GGCTGATATTTTCACCGCTTGG 60.224 50.000 0.00 0.00 39.35 3.61
2930 5196 2.682856 GCTGATATTTTCACCGCTTGGA 59.317 45.455 0.00 0.00 36.26 3.53
2931 5197 3.316308 GCTGATATTTTCACCGCTTGGAT 59.684 43.478 0.00 0.00 36.26 3.41
2932 5198 4.202050 GCTGATATTTTCACCGCTTGGATT 60.202 41.667 0.00 0.00 36.26 3.01
2933 5199 5.247507 TGATATTTTCACCGCTTGGATTG 57.752 39.130 0.00 0.00 36.26 2.67
2934 5200 4.704540 TGATATTTTCACCGCTTGGATTGT 59.295 37.500 0.00 0.00 36.26 2.71
2935 5201 3.575965 ATTTTCACCGCTTGGATTGTC 57.424 42.857 0.00 0.00 36.26 3.18
2936 5202 0.871722 TTTCACCGCTTGGATTGTCG 59.128 50.000 0.00 0.00 36.26 4.35
2937 5203 0.250124 TTCACCGCTTGGATTGTCGT 60.250 50.000 0.00 0.00 36.26 4.34
2938 5204 0.948623 TCACCGCTTGGATTGTCGTG 60.949 55.000 0.00 0.00 36.26 4.35
2939 5205 1.671054 ACCGCTTGGATTGTCGTGG 60.671 57.895 0.00 0.00 36.26 4.94
2940 5206 2.480555 CGCTTGGATTGTCGTGGC 59.519 61.111 0.00 0.00 0.00 5.01
2941 5207 2.480555 GCTTGGATTGTCGTGGCG 59.519 61.111 0.00 0.00 0.00 5.69
2942 5208 2.325082 GCTTGGATTGTCGTGGCGT 61.325 57.895 0.00 0.00 0.00 5.68
2943 5209 1.497278 CTTGGATTGTCGTGGCGTG 59.503 57.895 0.00 0.00 0.00 5.34
2944 5210 1.227704 TTGGATTGTCGTGGCGTGT 60.228 52.632 0.00 0.00 0.00 4.49
2945 5211 0.033642 TTGGATTGTCGTGGCGTGTA 59.966 50.000 0.00 0.00 0.00 2.90
2946 5212 0.389296 TGGATTGTCGTGGCGTGTAG 60.389 55.000 0.00 0.00 0.00 2.74
2956 5222 3.755404 GCGTGTAGCGTGTCTGAG 58.245 61.111 0.00 0.00 43.66 3.35
2957 5223 1.209383 GCGTGTAGCGTGTCTGAGA 59.791 57.895 0.00 0.00 43.66 3.27
2958 5224 1.066114 GCGTGTAGCGTGTCTGAGAC 61.066 60.000 5.47 5.47 43.66 3.36
2959 5225 0.789753 CGTGTAGCGTGTCTGAGACG 60.790 60.000 21.31 21.31 39.87 4.18
2960 5226 0.516001 GTGTAGCGTGTCTGAGACGA 59.484 55.000 28.34 8.01 39.21 4.20
2961 5227 0.516001 TGTAGCGTGTCTGAGACGAC 59.484 55.000 28.34 18.92 39.21 4.34
2962 5228 0.516001 GTAGCGTGTCTGAGACGACA 59.484 55.000 28.34 13.27 41.33 4.35
2963 5229 1.130749 GTAGCGTGTCTGAGACGACAT 59.869 52.381 28.34 16.02 44.84 3.06
2964 5230 1.450025 AGCGTGTCTGAGACGACATA 58.550 50.000 28.34 0.00 44.84 2.29
2965 5231 1.130749 AGCGTGTCTGAGACGACATAC 59.869 52.381 28.34 11.83 44.84 2.39
2966 5232 1.799181 CGTGTCTGAGACGACATACG 58.201 55.000 21.10 7.98 44.84 3.06
2967 5233 1.536149 GTGTCTGAGACGACATACGC 58.464 55.000 8.23 0.00 44.84 4.42
2968 5234 1.135774 GTGTCTGAGACGACATACGCA 60.136 52.381 8.23 0.00 44.84 5.24
2969 5235 1.538075 TGTCTGAGACGACATACGCAA 59.462 47.619 8.23 0.00 46.94 4.85
2970 5236 1.912110 GTCTGAGACGACATACGCAAC 59.088 52.381 0.00 0.00 46.94 4.17
2971 5237 1.538075 TCTGAGACGACATACGCAACA 59.462 47.619 0.00 0.00 46.94 3.33
2972 5238 2.163613 TCTGAGACGACATACGCAACAT 59.836 45.455 0.00 0.00 46.94 2.71
2973 5239 2.526077 TGAGACGACATACGCAACATC 58.474 47.619 0.00 0.00 46.94 3.06
2974 5240 2.094957 TGAGACGACATACGCAACATCA 60.095 45.455 0.00 0.00 46.94 3.07
2977 5243 1.730064 ACGACATACGCAACATCAACC 59.270 47.619 0.00 0.00 46.94 3.77
2978 5244 1.999735 CGACATACGCAACATCAACCT 59.000 47.619 0.00 0.00 34.51 3.50
2981 5247 4.612712 CGACATACGCAACATCAACCTTTT 60.613 41.667 0.00 0.00 34.51 2.27
2982 5248 5.390040 CGACATACGCAACATCAACCTTTTA 60.390 40.000 0.00 0.00 34.51 1.52
2983 5249 5.938322 ACATACGCAACATCAACCTTTTAG 58.062 37.500 0.00 0.00 0.00 1.85
2984 5250 3.282831 ACGCAACATCAACCTTTTAGC 57.717 42.857 0.00 0.00 0.00 3.09
2985 5251 2.030274 ACGCAACATCAACCTTTTAGCC 60.030 45.455 0.00 0.00 0.00 3.93
2988 5254 2.231716 ACATCAACCTTTTAGCCCCC 57.768 50.000 0.00 0.00 0.00 5.40
2989 5255 1.716503 ACATCAACCTTTTAGCCCCCT 59.283 47.619 0.00 0.00 0.00 4.79
2990 5256 2.923629 ACATCAACCTTTTAGCCCCCTA 59.076 45.455 0.00 0.00 0.00 3.53
2991 5257 3.335484 ACATCAACCTTTTAGCCCCCTAA 59.665 43.478 0.00 0.00 0.00 2.69
2993 5259 3.770046 TCAACCTTTTAGCCCCCTAAAC 58.230 45.455 0.00 0.00 41.82 2.01
2995 5261 3.898741 CAACCTTTTAGCCCCCTAAACAA 59.101 43.478 0.00 0.00 41.82 2.83
2998 5264 5.159637 ACCTTTTAGCCCCCTAAACAAATT 58.840 37.500 0.00 0.00 41.82 1.82
2999 5265 6.324544 ACCTTTTAGCCCCCTAAACAAATTA 58.675 36.000 0.00 0.00 41.82 1.40
3000 5266 6.963494 ACCTTTTAGCCCCCTAAACAAATTAT 59.037 34.615 0.00 0.00 41.82 1.28
3001 5267 7.125204 ACCTTTTAGCCCCCTAAACAAATTATC 59.875 37.037 0.00 0.00 41.82 1.75
3002 5268 7.125053 CCTTTTAGCCCCCTAAACAAATTATCA 59.875 37.037 0.00 0.00 41.82 2.15
3003 5269 8.616799 TTTTAGCCCCCTAAACAAATTATCAT 57.383 30.769 0.00 0.00 41.82 2.45
3004 5270 7.595819 TTAGCCCCCTAAACAAATTATCATG 57.404 36.000 0.00 0.00 30.81 3.07
3005 5271 4.901250 AGCCCCCTAAACAAATTATCATGG 59.099 41.667 0.00 0.00 0.00 3.66
3006 5272 4.653801 GCCCCCTAAACAAATTATCATGGT 59.346 41.667 0.00 0.00 0.00 3.55
3007 5273 5.130311 GCCCCCTAAACAAATTATCATGGTT 59.870 40.000 0.00 0.00 0.00 3.67
3008 5274 6.352651 GCCCCCTAAACAAATTATCATGGTTT 60.353 38.462 0.00 0.00 35.93 3.27
3010 5276 7.093112 CCCCCTAAACAAATTATCATGGTTTCA 60.093 37.037 0.00 0.00 34.00 2.69
3011 5277 8.317679 CCCCTAAACAAATTATCATGGTTTCAA 58.682 33.333 0.00 0.00 34.00 2.69
3012 5278 9.889128 CCCTAAACAAATTATCATGGTTTCAAT 57.111 29.630 0.00 0.00 34.00 2.57
3020 5286 8.876275 AATTATCATGGTTTCAATGAAATCCG 57.124 30.769 15.52 7.66 32.25 4.18
3021 5287 5.920193 ATCATGGTTTCAATGAAATCCGT 57.080 34.783 15.52 13.97 32.25 4.69
3022 5288 5.720371 TCATGGTTTCAATGAAATCCGTT 57.280 34.783 15.52 6.64 32.25 4.44
3023 5289 5.468592 TCATGGTTTCAATGAAATCCGTTG 58.531 37.500 15.52 15.45 41.90 4.10
3024 5290 4.927978 TGGTTTCAATGAAATCCGTTGT 57.072 36.364 15.52 0.00 41.41 3.32
3026 5292 4.098654 TGGTTTCAATGAAATCCGTTGTGT 59.901 37.500 15.52 0.00 41.41 3.72
3027 5293 5.047188 GGTTTCAATGAAATCCGTTGTGTT 58.953 37.500 11.87 0.00 41.41 3.32
3029 5295 6.697892 GGTTTCAATGAAATCCGTTGTGTTTA 59.302 34.615 11.87 0.00 41.41 2.01
3031 5297 9.400638 GTTTCAATGAAATCCGTTGTGTTTATA 57.599 29.630 11.87 0.00 41.41 0.98
3033 5299 9.781834 TTCAATGAAATCCGTTGTGTTTATATC 57.218 29.630 0.00 0.00 41.41 1.63
3034 5300 8.951243 TCAATGAAATCCGTTGTGTTTATATCA 58.049 29.630 0.00 0.00 41.41 2.15
3035 5301 9.566530 CAATGAAATCCGTTGTGTTTATATCAA 57.433 29.630 0.00 0.00 37.08 2.57
3041 5307 8.835467 ATCCGTTGTGTTTATATCAAAATTCG 57.165 30.769 0.00 0.00 0.00 3.34
3042 5308 6.743627 TCCGTTGTGTTTATATCAAAATTCGC 59.256 34.615 0.00 0.00 0.00 4.70
3043 5309 6.020995 CCGTTGTGTTTATATCAAAATTCGCC 60.021 38.462 0.00 0.00 0.00 5.54
3044 5310 6.290334 CGTTGTGTTTATATCAAAATTCGCCG 60.290 38.462 0.00 0.00 0.00 6.46
3045 5311 5.574082 TGTGTTTATATCAAAATTCGCCGG 58.426 37.500 0.00 0.00 0.00 6.13
3057 5641 3.866883 ATTCGCCGGTTTGAATTTGAT 57.133 38.095 1.90 0.00 30.90 2.57
3058 5642 3.651803 TTCGCCGGTTTGAATTTGATT 57.348 38.095 1.90 0.00 0.00 2.57
3059 5643 2.940147 TCGCCGGTTTGAATTTGATTG 58.060 42.857 1.90 0.00 0.00 2.67
3060 5644 1.991965 CGCCGGTTTGAATTTGATTGG 59.008 47.619 1.90 0.00 0.00 3.16
3062 5646 3.398406 GCCGGTTTGAATTTGATTGGTT 58.602 40.909 1.90 0.00 0.00 3.67
3063 5647 3.431912 GCCGGTTTGAATTTGATTGGTTC 59.568 43.478 1.90 0.00 0.00 3.62
3066 5650 4.616802 CGGTTTGAATTTGATTGGTTCGAG 59.383 41.667 0.00 0.00 0.00 4.04
3067 5651 5.528870 GGTTTGAATTTGATTGGTTCGAGT 58.471 37.500 0.00 0.00 0.00 4.18
3068 5652 5.983118 GGTTTGAATTTGATTGGTTCGAGTT 59.017 36.000 0.00 0.00 0.00 3.01
3069 5653 6.074356 GGTTTGAATTTGATTGGTTCGAGTTG 60.074 38.462 0.00 0.00 0.00 3.16
3070 5654 5.766150 TGAATTTGATTGGTTCGAGTTGT 57.234 34.783 0.00 0.00 0.00 3.32
3071 5655 5.757886 TGAATTTGATTGGTTCGAGTTGTC 58.242 37.500 0.00 0.00 0.00 3.18
3072 5656 5.298026 TGAATTTGATTGGTTCGAGTTGTCA 59.702 36.000 0.00 0.00 0.00 3.58
3073 5657 5.964958 ATTTGATTGGTTCGAGTTGTCAT 57.035 34.783 0.00 0.00 0.00 3.06
3074 5658 4.747540 TTGATTGGTTCGAGTTGTCATG 57.252 40.909 0.00 0.00 0.00 3.07
3075 5659 4.001618 TGATTGGTTCGAGTTGTCATGA 57.998 40.909 0.00 0.00 0.00 3.07
3076 5660 4.384940 TGATTGGTTCGAGTTGTCATGAA 58.615 39.130 0.00 0.00 0.00 2.57
3078 5662 5.298026 TGATTGGTTCGAGTTGTCATGAAAA 59.702 36.000 0.00 0.00 0.00 2.29
3079 5663 5.766150 TTGGTTCGAGTTGTCATGAAAAT 57.234 34.783 0.61 0.00 0.00 1.82
3080 5664 6.869315 TTGGTTCGAGTTGTCATGAAAATA 57.131 33.333 0.61 0.00 0.00 1.40
3083 5667 8.731275 TGGTTCGAGTTGTCATGAAAATATAT 57.269 30.769 0.61 0.00 0.00 0.86
3084 5668 8.611757 TGGTTCGAGTTGTCATGAAAATATATG 58.388 33.333 0.61 0.00 0.00 1.78
3086 5670 9.855361 GTTCGAGTTGTCATGAAAATATATGAG 57.145 33.333 0.61 0.00 34.25 2.90
3087 5671 8.076714 TCGAGTTGTCATGAAAATATATGAGC 57.923 34.615 0.61 0.00 34.25 4.26
3092 5676 9.056005 GTTGTCATGAAAATATATGAGCCTACA 57.944 33.333 0.61 0.00 34.25 2.74
3093 5677 8.837788 TGTCATGAAAATATATGAGCCTACAG 57.162 34.615 0.00 0.00 34.25 2.74
3095 5679 9.277783 GTCATGAAAATATATGAGCCTACAGTT 57.722 33.333 0.00 0.00 34.25 3.16
3097 5681 8.509690 CATGAAAATATATGAGCCTACAGTTGG 58.490 37.037 0.00 0.00 0.00 3.77
3100 5684 8.627208 AAAATATATGAGCCTACAGTTGGATG 57.373 34.615 5.05 0.00 0.00 3.51
3101 5685 4.630644 ATATGAGCCTACAGTTGGATGG 57.369 45.455 5.05 0.00 0.00 3.51
3102 5686 1.656587 TGAGCCTACAGTTGGATGGT 58.343 50.000 5.05 0.00 0.00 3.55
3104 5688 2.290260 TGAGCCTACAGTTGGATGGTTG 60.290 50.000 5.05 0.00 0.00 3.77
3105 5689 0.811281 GCCTACAGTTGGATGGTTGC 59.189 55.000 5.05 0.00 0.00 4.17
3106 5690 1.463674 CCTACAGTTGGATGGTTGCC 58.536 55.000 0.00 0.00 0.00 4.52
3108 5692 2.359900 CTACAGTTGGATGGTTGCCTC 58.640 52.381 0.00 0.00 0.00 4.70
3109 5693 0.251341 ACAGTTGGATGGTTGCCTCC 60.251 55.000 0.00 0.00 0.00 4.30
3111 5695 2.046285 GTTGGATGGTTGCCTCCCG 61.046 63.158 0.00 0.00 0.00 5.14
3112 5696 3.936772 TTGGATGGTTGCCTCCCGC 62.937 63.158 0.00 0.00 38.31 6.13
3120 5704 3.226242 TGCCTCCCGCATTCGTAT 58.774 55.556 0.00 0.00 44.64 3.06
3121 5705 1.069090 TGCCTCCCGCATTCGTATC 59.931 57.895 0.00 0.00 44.64 2.24
3122 5706 1.668151 GCCTCCCGCATTCGTATCC 60.668 63.158 0.00 0.00 37.47 2.59
3123 5707 1.372997 CCTCCCGCATTCGTATCCG 60.373 63.158 0.00 0.00 0.00 4.18
3124 5708 2.022129 CTCCCGCATTCGTATCCGC 61.022 63.158 0.00 0.00 0.00 5.54
3125 5709 3.403057 CCCGCATTCGTATCCGCG 61.403 66.667 0.00 0.00 46.96 6.46
3127 5711 2.354188 CGCATTCGTATCCGCGGA 60.354 61.111 33.12 33.12 43.84 5.54
3128 5712 2.645510 CGCATTCGTATCCGCGGAC 61.646 63.158 33.75 19.22 43.84 4.79
3130 5714 0.039798 GCATTCGTATCCGCGGACTA 60.040 55.000 33.75 20.46 0.00 2.59
3131 5715 1.965083 CATTCGTATCCGCGGACTAG 58.035 55.000 33.75 23.51 0.00 2.57
3132 5716 0.240411 ATTCGTATCCGCGGACTAGC 59.760 55.000 33.75 19.00 0.00 3.42
3134 5718 2.649614 GTATCCGCGGACTAGCCC 59.350 66.667 33.75 10.85 0.00 5.19
3143 5727 2.728817 GACTAGCCCGGACGGATG 59.271 66.667 13.13 0.00 37.50 3.51
3144 5728 3.501458 GACTAGCCCGGACGGATGC 62.501 68.421 13.13 8.11 37.50 3.91
3145 5729 3.227276 CTAGCCCGGACGGATGCT 61.227 66.667 13.13 15.16 36.84 3.79
3146 5730 3.506059 CTAGCCCGGACGGATGCTG 62.506 68.421 19.97 9.59 35.13 4.41
3150 5734 3.197790 CCGGACGGATGCTGCAAG 61.198 66.667 6.36 3.91 37.50 4.01
3152 5736 1.741401 CGGACGGATGCTGCAAGAA 60.741 57.895 6.36 0.00 34.07 2.52
3153 5737 1.298157 CGGACGGATGCTGCAAGAAA 61.298 55.000 6.36 0.00 34.07 2.52
3154 5738 1.098050 GGACGGATGCTGCAAGAAAT 58.902 50.000 6.36 0.00 34.07 2.17
3155 5739 1.474077 GGACGGATGCTGCAAGAAATT 59.526 47.619 6.36 0.00 34.07 1.82
3156 5740 2.094545 GGACGGATGCTGCAAGAAATTT 60.095 45.455 6.36 0.00 34.07 1.82
3157 5741 2.919229 GACGGATGCTGCAAGAAATTTG 59.081 45.455 6.36 0.00 34.07 2.32
3166 5750 1.147473 CAAGAAATTTGCGGGTTGCC 58.853 50.000 0.00 0.00 45.60 4.52
3167 5751 0.755686 AAGAAATTTGCGGGTTGCCA 59.244 45.000 0.00 0.00 45.60 4.92
3169 5753 1.347378 AGAAATTTGCGGGTTGCCATT 59.653 42.857 0.00 0.00 45.60 3.16
3170 5754 1.464219 GAAATTTGCGGGTTGCCATTG 59.536 47.619 0.00 0.00 45.60 2.82
3173 5757 0.033228 TTTGCGGGTTGCCATTGAAG 59.967 50.000 0.00 0.00 45.60 3.02
3174 5758 0.825425 TTGCGGGTTGCCATTGAAGA 60.825 50.000 0.00 0.00 45.60 2.87
3175 5759 0.611618 TGCGGGTTGCCATTGAAGAT 60.612 50.000 0.00 0.00 45.60 2.40
3176 5760 0.179129 GCGGGTTGCCATTGAAGATG 60.179 55.000 0.00 0.00 37.76 2.90
3177 5761 0.179129 CGGGTTGCCATTGAAGATGC 60.179 55.000 0.00 0.00 0.00 3.91
3179 5763 0.176449 GGTTGCCATTGAAGATGCCC 59.824 55.000 0.00 0.00 0.00 5.36
3192 5816 7.531857 TTGAAGATGCCCTAACAATACAAAA 57.468 32.000 0.00 0.00 0.00 2.44
3193 5817 6.919721 TGAAGATGCCCTAACAATACAAAAC 58.080 36.000 0.00 0.00 0.00 2.43
3194 5818 6.491745 TGAAGATGCCCTAACAATACAAAACA 59.508 34.615 0.00 0.00 0.00 2.83
3195 5819 6.267496 AGATGCCCTAACAATACAAAACAC 57.733 37.500 0.00 0.00 0.00 3.32
3196 5820 5.772672 AGATGCCCTAACAATACAAAACACA 59.227 36.000 0.00 0.00 0.00 3.72
3197 5821 5.854010 TGCCCTAACAATACAAAACACAA 57.146 34.783 0.00 0.00 0.00 3.33
3233 5857 8.357402 TGAAAGAAAGAAAATTACTACCAAGCC 58.643 33.333 0.00 0.00 0.00 4.35
3248 5872 7.103641 ACTACCAAGCCCATATTATATTCACG 58.896 38.462 0.00 0.00 0.00 4.35
3254 5878 5.667626 AGCCCATATTATATTCACGGAGGAT 59.332 40.000 0.00 0.00 0.00 3.24
3308 5932 1.172812 AACCAAGGCTTCAACTCGGC 61.173 55.000 0.00 0.00 0.00 5.54
3317 5941 0.960364 TTCAACTCGGCTGCAATCCC 60.960 55.000 0.50 0.00 0.00 3.85
3375 5999 2.093764 CCACAACCAGCTCTAGAGGAAG 60.094 54.545 21.23 6.64 0.00 3.46
3377 6001 1.552337 CAACCAGCTCTAGAGGAAGCA 59.448 52.381 21.23 0.00 0.00 3.91
3404 6028 3.064900 AGAAGTGATGAACTCCAAGCC 57.935 47.619 0.00 0.00 38.56 4.35
3405 6029 2.087646 GAAGTGATGAACTCCAAGCCC 58.912 52.381 0.00 0.00 38.56 5.19
3452 6077 2.634940 TCCAGGTCAGAGGAAGAAAGTG 59.365 50.000 0.00 0.00 0.00 3.16
3481 6106 7.207383 CGTAGGTTTCATCAGTATGTTATCCA 58.793 38.462 0.00 0.00 37.40 3.41
3527 6152 4.796231 CTCCGTTCGGCCAGACGG 62.796 72.222 31.00 31.00 41.55 4.79
3538 6163 1.226030 GCCAGACGGTACAACACACC 61.226 60.000 0.00 0.00 33.28 4.16
3539 6164 0.601841 CCAGACGGTACAACACACCC 60.602 60.000 0.00 0.00 31.96 4.61
3545 6170 1.303091 GGTACAACACACCCGCCATC 61.303 60.000 0.00 0.00 0.00 3.51
3560 6185 1.216977 CATCGTCCACCGTTGCCTA 59.783 57.895 0.00 0.00 37.94 3.93
3581 6206 1.284491 TGGGCAGCATCATTGTCCTAA 59.716 47.619 0.00 0.00 40.97 2.69
3587 6212 4.443457 GCAGCATCATTGTCCTAACTCCTA 60.443 45.833 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.279233 ACAGGGTGTGGCTATTTCATATATATA 57.721 33.333 0.00 0.00 0.00 0.86
21 22 8.162848 ACAGGGTGTGGCTATTTCATATATAT 57.837 34.615 0.00 0.00 0.00 0.86
22 23 7.568128 ACAGGGTGTGGCTATTTCATATATA 57.432 36.000 0.00 0.00 0.00 0.86
23 24 6.454223 ACAGGGTGTGGCTATTTCATATAT 57.546 37.500 0.00 0.00 0.00 0.86
24 25 5.904984 ACAGGGTGTGGCTATTTCATATA 57.095 39.130 0.00 0.00 0.00 0.86
25 26 4.796110 ACAGGGTGTGGCTATTTCATAT 57.204 40.909 0.00 0.00 0.00 1.78
26 27 4.584638 AACAGGGTGTGGCTATTTCATA 57.415 40.909 0.00 0.00 0.00 2.15
27 28 3.456380 AACAGGGTGTGGCTATTTCAT 57.544 42.857 0.00 0.00 0.00 2.57
28 29 2.969821 AACAGGGTGTGGCTATTTCA 57.030 45.000 0.00 0.00 0.00 2.69
29 30 3.694566 CCTAAACAGGGTGTGGCTATTTC 59.305 47.826 0.00 0.00 0.00 2.17
30 31 3.563479 CCCTAAACAGGGTGTGGCTATTT 60.563 47.826 1.23 0.00 44.08 1.40
31 32 2.025321 CCCTAAACAGGGTGTGGCTATT 60.025 50.000 1.23 0.00 44.08 1.73
32 33 1.564348 CCCTAAACAGGGTGTGGCTAT 59.436 52.381 1.23 0.00 44.08 2.97
33 34 0.988832 CCCTAAACAGGGTGTGGCTA 59.011 55.000 1.23 0.00 44.08 3.93
34 35 1.767692 CCCTAAACAGGGTGTGGCT 59.232 57.895 1.23 0.00 44.08 4.75
35 36 4.415783 CCCTAAACAGGGTGTGGC 57.584 61.111 1.23 0.00 44.08 5.01
42 43 0.250124 TGCACGACACCCTAAACAGG 60.250 55.000 0.00 0.00 0.00 4.00
43 44 1.148310 CTGCACGACACCCTAAACAG 58.852 55.000 0.00 0.00 0.00 3.16
44 45 0.466543 ACTGCACGACACCCTAAACA 59.533 50.000 0.00 0.00 0.00 2.83
45 46 1.589803 AACTGCACGACACCCTAAAC 58.410 50.000 0.00 0.00 0.00 2.01
46 47 2.215196 GAAACTGCACGACACCCTAAA 58.785 47.619 0.00 0.00 0.00 1.85
47 48 1.541670 GGAAACTGCACGACACCCTAA 60.542 52.381 0.00 0.00 0.00 2.69
48 49 0.034337 GGAAACTGCACGACACCCTA 59.966 55.000 0.00 0.00 0.00 3.53
49 50 1.227853 GGAAACTGCACGACACCCT 60.228 57.895 0.00 0.00 0.00 4.34
50 51 2.258726 GGGAAACTGCACGACACCC 61.259 63.158 0.00 0.00 0.00 4.61
51 52 1.098712 TTGGGAAACTGCACGACACC 61.099 55.000 0.00 0.00 0.00 4.16
52 53 0.028902 GTTGGGAAACTGCACGACAC 59.971 55.000 0.00 0.00 0.00 3.67
53 54 0.393132 TGTTGGGAAACTGCACGACA 60.393 50.000 0.00 0.00 0.00 4.35
54 55 0.736053 TTGTTGGGAAACTGCACGAC 59.264 50.000 0.00 0.00 0.00 4.34
55 56 1.686355 ATTGTTGGGAAACTGCACGA 58.314 45.000 0.00 0.00 0.00 4.35
56 57 2.664424 CGTATTGTTGGGAAACTGCACG 60.664 50.000 0.00 0.00 0.00 5.34
57 58 2.292292 ACGTATTGTTGGGAAACTGCAC 59.708 45.455 0.00 0.00 0.00 4.57
58 59 2.550606 GACGTATTGTTGGGAAACTGCA 59.449 45.455 0.00 0.00 0.00 4.41
59 60 2.812011 AGACGTATTGTTGGGAAACTGC 59.188 45.455 0.00 0.00 0.00 4.40
60 61 5.467399 TGTAAGACGTATTGTTGGGAAACTG 59.533 40.000 5.52 0.00 0.00 3.16
61 62 5.613329 TGTAAGACGTATTGTTGGGAAACT 58.387 37.500 5.52 0.00 0.00 2.66
62 63 5.467735 ACTGTAAGACGTATTGTTGGGAAAC 59.532 40.000 5.52 0.00 37.43 2.78
63 64 5.613329 ACTGTAAGACGTATTGTTGGGAAA 58.387 37.500 5.52 0.00 37.43 3.13
64 65 5.217978 ACTGTAAGACGTATTGTTGGGAA 57.782 39.130 5.52 0.00 37.43 3.97
65 66 4.877378 ACTGTAAGACGTATTGTTGGGA 57.123 40.909 5.52 0.00 37.43 4.37
66 67 4.390909 GGAACTGTAAGACGTATTGTTGGG 59.609 45.833 5.52 0.00 37.43 4.12
67 68 4.992319 TGGAACTGTAAGACGTATTGTTGG 59.008 41.667 5.52 0.00 37.43 3.77
68 69 5.389516 GCTGGAACTGTAAGACGTATTGTTG 60.390 44.000 5.52 0.00 37.43 3.33
69 70 4.689345 GCTGGAACTGTAAGACGTATTGTT 59.311 41.667 5.52 1.05 37.43 2.83
70 71 4.243270 GCTGGAACTGTAAGACGTATTGT 58.757 43.478 5.52 0.00 37.43 2.71
71 72 3.303495 CGCTGGAACTGTAAGACGTATTG 59.697 47.826 5.52 0.00 37.43 1.90
72 73 3.192001 TCGCTGGAACTGTAAGACGTATT 59.808 43.478 0.00 0.00 37.43 1.89
73 74 2.751259 TCGCTGGAACTGTAAGACGTAT 59.249 45.455 0.00 0.00 37.43 3.06
74 75 2.153645 TCGCTGGAACTGTAAGACGTA 58.846 47.619 0.00 0.00 37.43 3.57
75 76 0.956633 TCGCTGGAACTGTAAGACGT 59.043 50.000 0.00 0.00 37.43 4.34
76 77 1.199327 TCTCGCTGGAACTGTAAGACG 59.801 52.381 0.00 0.00 37.43 4.18
77 78 2.229302 ACTCTCGCTGGAACTGTAAGAC 59.771 50.000 0.00 0.00 37.43 3.01
78 79 2.229062 CACTCTCGCTGGAACTGTAAGA 59.771 50.000 0.00 0.00 37.43 2.10
79 80 2.600731 CACTCTCGCTGGAACTGTAAG 58.399 52.381 0.00 0.00 42.29 2.34
80 81 1.272490 CCACTCTCGCTGGAACTGTAA 59.728 52.381 0.00 0.00 0.00 2.41
81 82 0.888619 CCACTCTCGCTGGAACTGTA 59.111 55.000 0.00 0.00 0.00 2.74
82 83 1.668294 CCACTCTCGCTGGAACTGT 59.332 57.895 0.00 0.00 0.00 3.55
83 84 1.739562 GCCACTCTCGCTGGAACTG 60.740 63.158 0.00 0.00 0.00 3.16
84 85 0.612174 TAGCCACTCTCGCTGGAACT 60.612 55.000 0.00 0.00 37.12 3.01
109 110 2.957402 AACATCACAAGGCCTTCTCA 57.043 45.000 17.29 1.57 0.00 3.27
125 126 1.698506 AAATCTTGGTGGCCGAAACA 58.301 45.000 0.00 0.00 0.00 2.83
130 131 2.810439 TTTGAAAATCTTGGTGGCCG 57.190 45.000 0.00 0.00 0.00 6.13
132 133 6.616774 TCAAAATTTGAAAATCTTGGTGGC 57.383 33.333 5.87 0.00 36.59 5.01
204 205 7.501225 GGCTTGAATTTATAGGGCTTTGTAGTA 59.499 37.037 0.00 0.00 0.00 1.82
214 215 3.896888 TGCATGGGCTTGAATTTATAGGG 59.103 43.478 0.00 0.00 41.91 3.53
217 218 8.654485 ATCTAATGCATGGGCTTGAATTTATA 57.346 30.769 0.00 0.00 41.91 0.98
223 227 4.139786 GAGATCTAATGCATGGGCTTGAA 58.860 43.478 0.00 0.00 41.91 2.69
261 266 9.695526 TCTCATGGAGTTTTTATTTTGTTCATG 57.304 29.630 0.00 0.00 0.00 3.07
326 746 3.184541 CCCGGTCGTTTCTTGTATGTAG 58.815 50.000 0.00 0.00 0.00 2.74
332 752 0.178533 TGAACCCGGTCGTTTCTTGT 59.821 50.000 0.00 0.00 0.00 3.16
333 753 1.301423 TTGAACCCGGTCGTTTCTTG 58.699 50.000 0.00 0.00 0.00 3.02
340 760 3.454371 AGAAGATATTGAACCCGGTCG 57.546 47.619 0.00 0.00 0.00 4.79
343 763 4.589374 AGGACTAGAAGATATTGAACCCGG 59.411 45.833 0.00 0.00 0.00 5.73
413 833 3.812609 ACGCATGGAATATTTCGTGCATA 59.187 39.130 31.16 0.00 40.06 3.14
434 854 1.665679 CGGTGAACACTATGGATGCAC 59.334 52.381 4.96 0.00 0.00 4.57
443 863 0.179043 TGCCAAAGCGGTGAACACTA 60.179 50.000 4.96 0.00 44.31 2.74
480 901 7.011389 CGAAGCCAGATATATTTTGTCTCAACA 59.989 37.037 0.00 0.00 0.00 3.33
481 902 7.011482 ACGAAGCCAGATATATTTTGTCTCAAC 59.989 37.037 0.00 0.00 0.00 3.18
498 919 5.106712 ACATTATGTTACACAACGAAGCCAG 60.107 40.000 0.00 0.00 37.48 4.85
507 928 9.119329 GACGCAATAAAACATTATGTTACACAA 57.881 29.630 11.23 0.00 40.14 3.33
509 930 7.966204 AGGACGCAATAAAACATTATGTTACAC 59.034 33.333 11.23 0.00 40.14 2.90
511 932 8.905103 AAGGACGCAATAAAACATTATGTTAC 57.095 30.769 11.23 0.00 40.14 2.50
513 934 8.825667 AAAAGGACGCAATAAAACATTATGTT 57.174 26.923 4.56 4.56 43.41 2.71
530 951 7.755582 AAACTTTGAAATGAGAAAAAGGACG 57.244 32.000 0.00 0.00 34.61 4.79
561 982 9.768662 AACATTAACTTTGAAATGAGAAATGCT 57.231 25.926 2.30 0.00 36.73 3.79
633 1055 7.994425 TCATAATGTTTCATTGTGTACCAGT 57.006 32.000 15.04 0.00 0.00 4.00
772 1197 3.307242 GTCGCTATTGTGAGATGTGTTCC 59.693 47.826 0.00 0.00 32.87 3.62
773 1198 3.000674 CGTCGCTATTGTGAGATGTGTTC 60.001 47.826 0.00 0.00 32.87 3.18
774 1199 2.923655 CGTCGCTATTGTGAGATGTGTT 59.076 45.455 0.00 0.00 32.87 3.32
775 1200 2.530177 CGTCGCTATTGTGAGATGTGT 58.470 47.619 0.00 0.00 32.87 3.72
776 1201 1.854743 CCGTCGCTATTGTGAGATGTG 59.145 52.381 0.00 0.00 32.87 3.21
777 1202 1.749063 TCCGTCGCTATTGTGAGATGT 59.251 47.619 0.00 0.00 32.87 3.06
778 1203 2.492019 TCCGTCGCTATTGTGAGATG 57.508 50.000 0.00 0.00 32.87 2.90
779 1204 2.165641 TGTTCCGTCGCTATTGTGAGAT 59.834 45.455 0.00 0.00 32.87 2.75
780 1205 1.542472 TGTTCCGTCGCTATTGTGAGA 59.458 47.619 0.00 0.00 32.87 3.27
781 1206 1.654105 GTGTTCCGTCGCTATTGTGAG 59.346 52.381 0.00 0.00 32.87 3.51
782 1207 1.000052 TGTGTTCCGTCGCTATTGTGA 60.000 47.619 0.00 0.00 0.00 3.58
783 1208 1.424403 TGTGTTCCGTCGCTATTGTG 58.576 50.000 0.00 0.00 0.00 3.33
784 1209 2.094182 AGATGTGTTCCGTCGCTATTGT 60.094 45.455 0.00 0.00 34.06 2.71
785 1210 2.535984 GAGATGTGTTCCGTCGCTATTG 59.464 50.000 0.00 0.00 34.06 1.90
786 1211 2.165641 TGAGATGTGTTCCGTCGCTATT 59.834 45.455 0.00 0.00 34.06 1.73
787 1212 1.749063 TGAGATGTGTTCCGTCGCTAT 59.251 47.619 0.00 0.00 34.06 2.97
788 1213 1.132453 CTGAGATGTGTTCCGTCGCTA 59.868 52.381 0.00 0.00 34.06 4.26
789 1214 0.109086 CTGAGATGTGTTCCGTCGCT 60.109 55.000 0.00 0.00 34.06 4.93
790 1215 0.388649 ACTGAGATGTGTTCCGTCGC 60.389 55.000 0.00 0.00 34.06 5.19
791 1216 1.340658 CACTGAGATGTGTTCCGTCG 58.659 55.000 0.00 0.00 34.06 5.12
792 1217 1.071605 GCACTGAGATGTGTTCCGTC 58.928 55.000 0.00 0.00 39.89 4.79
793 1218 0.392706 TGCACTGAGATGTGTTCCGT 59.607 50.000 0.00 0.00 39.89 4.69
794 1219 1.073964 CTGCACTGAGATGTGTTCCG 58.926 55.000 0.00 0.00 39.89 4.30
823 1248 6.493115 AGTCATGAGTGGGAACTATCTAGATG 59.507 42.308 15.79 7.90 0.00 2.90
856 1594 3.029074 GACATCGTTGATGCGTTTATGC 58.971 45.455 6.70 0.00 43.15 3.14
928 1670 7.717568 TGTACTACTTCAATTATCTGGAGCTC 58.282 38.462 4.71 4.71 0.00 4.09
931 1673 7.436673 GTGCTGTACTACTTCAATTATCTGGAG 59.563 40.741 0.00 0.00 0.00 3.86
932 1674 7.124298 AGTGCTGTACTACTTCAATTATCTGGA 59.876 37.037 0.00 0.00 38.04 3.86
933 1675 7.268586 AGTGCTGTACTACTTCAATTATCTGG 58.731 38.462 0.00 0.00 38.04 3.86
934 1676 8.194104 AGAGTGCTGTACTACTTCAATTATCTG 58.806 37.037 0.00 0.00 40.53 2.90
935 1677 8.299990 AGAGTGCTGTACTACTTCAATTATCT 57.700 34.615 0.00 0.00 40.53 1.98
936 1678 7.377397 CGAGAGTGCTGTACTACTTCAATTATC 59.623 40.741 0.00 0.00 40.53 1.75
954 1696 1.965754 AATCCCCTGAGCGAGAGTGC 61.966 60.000 0.00 0.00 0.00 4.40
968 1710 0.699231 ATCTGGACCTCCCCAATCCC 60.699 60.000 0.00 0.00 35.47 3.85
975 1717 4.779993 ACTTCAATTATCTGGACCTCCC 57.220 45.455 0.00 0.00 34.29 4.30
980 1726 7.280876 TGAGCATTGTACTTCAATTATCTGGAC 59.719 37.037 0.00 0.00 43.33 4.02
988 1734 4.397417 GCCTCTGAGCATTGTACTTCAATT 59.603 41.667 0.00 0.00 43.33 2.32
992 1738 3.258971 AGCCTCTGAGCATTGTACTTC 57.741 47.619 0.00 0.00 34.23 3.01
995 1741 2.012673 CCAAGCCTCTGAGCATTGTAC 58.987 52.381 14.85 0.00 34.23 2.90
1124 1881 2.049433 GCGTGTACACCAGCTCGT 60.049 61.111 20.11 0.00 0.00 4.18
1160 1917 2.282251 AGGAGACCAGCACGTCGA 60.282 61.111 0.00 0.00 37.85 4.20
1202 1959 4.980805 GCCTCACCGTGGCGTTGA 62.981 66.667 0.00 0.00 41.03 3.18
1354 2114 3.998672 GAACACCTCGGACGGCCA 61.999 66.667 8.76 0.00 0.00 5.36
1455 2218 0.863799 CGTAGTACAGCTCGCCGATA 59.136 55.000 0.38 0.00 0.00 2.92
1461 2224 0.657659 CGATGGCGTAGTACAGCTCG 60.658 60.000 13.99 12.54 0.00 5.03
1617 2380 4.657824 CCGTCGGCGTTGACCAGT 62.658 66.667 9.28 0.00 35.40 4.00
1668 2431 1.001631 TCGGATGGCCCAGAAGAGA 59.998 57.895 0.00 0.00 34.14 3.10
1765 2528 0.037605 ACCGTCCTTCCGATGTTGAC 60.038 55.000 0.00 0.00 0.00 3.18
1812 2575 2.202743 GCGACGTGCTGCCATCTA 60.203 61.111 0.00 0.00 41.73 1.98
1890 2653 1.676014 CCGAGGTAAAGTGCCTGGAAG 60.676 57.143 0.00 0.00 36.29 3.46
1899 2662 0.460284 CGCATGAGCCGAGGTAAAGT 60.460 55.000 0.00 0.00 37.52 2.66
2129 2892 0.250338 GATGTCCTTCCATACGGCCC 60.250 60.000 0.00 0.00 0.00 5.80
2164 2930 4.856801 CCCCGAGCCGTCCATTGG 62.857 72.222 0.00 0.00 0.00 3.16
2176 2942 2.142761 CCAGGATGATCTGCCCCGA 61.143 63.158 0.00 0.00 39.69 5.14
2283 3049 0.471191 CCTGCTGATCCCAGTATGCA 59.529 55.000 8.98 0.00 42.35 3.96
2328 3100 3.949754 AGTCGTATAAGGTGTCGATCCAA 59.050 43.478 11.23 1.18 34.93 3.53
2339 3111 2.104111 TGCCCCATGAAGTCGTATAAGG 59.896 50.000 0.00 0.00 0.00 2.69
2362 3134 0.600255 CTCGGGTTCTTGCTCACGTT 60.600 55.000 0.00 0.00 0.00 3.99
2403 3175 2.284625 TGGCCGATGTCCAGGTCT 60.285 61.111 0.00 0.00 32.36 3.85
2481 3271 2.017559 ATGCGAGCCTCCGGTAGTTC 62.018 60.000 0.00 0.41 0.00 3.01
2532 3322 0.392706 TGCTCTGCTCGTTCCTGAAA 59.607 50.000 0.00 0.00 0.00 2.69
2565 3355 1.456678 CTTGCGTCGTCATCGTCTCG 61.457 60.000 0.00 0.00 38.33 4.04
2573 3363 1.467543 GCTAGATCACTTGCGTCGTCA 60.468 52.381 0.00 0.00 35.55 4.35
2617 3407 6.533819 TCGACGTGTTAATTTGTCTGATTT 57.466 33.333 0.00 0.00 0.00 2.17
2618 3408 6.183360 GGATCGACGTGTTAATTTGTCTGATT 60.183 38.462 0.00 0.00 30.57 2.57
2626 3416 5.416083 TCATCAGGATCGACGTGTTAATTT 58.584 37.500 0.00 0.00 36.04 1.82
2636 3426 2.235016 AGTAGGCTCATCAGGATCGAC 58.765 52.381 0.00 0.00 0.00 4.20
2643 3433 1.609555 GACCGGTAGTAGGCTCATCAG 59.390 57.143 7.34 0.00 0.00 2.90
2649 3439 0.473326 ATCTCGACCGGTAGTAGGCT 59.527 55.000 7.34 0.00 0.00 4.58
2659 3449 2.123342 GAAGCAATCTGATCTCGACCG 58.877 52.381 0.00 0.00 0.00 4.79
2660 3450 2.159043 TGGAAGCAATCTGATCTCGACC 60.159 50.000 0.00 0.00 0.00 4.79
2672 3462 5.925506 TGTTCATTCATGATGGAAGCAAT 57.074 34.783 9.18 0.00 33.49 3.56
2679 3469 6.088483 CGTTCTGTTTTGTTCATTCATGATGG 59.912 38.462 0.00 0.00 36.56 3.51
2690 4773 5.090652 TGATAGCACGTTCTGTTTTGTTC 57.909 39.130 0.00 0.00 0.00 3.18
2691 4774 5.493133 TTGATAGCACGTTCTGTTTTGTT 57.507 34.783 0.00 0.00 0.00 2.83
2703 4786 5.006261 TCACCGAAATACAATTGATAGCACG 59.994 40.000 13.59 9.96 0.00 5.34
2707 4790 5.527214 TGGCTCACCGAAATACAATTGATAG 59.473 40.000 13.59 0.00 39.70 2.08
2710 4793 3.680490 TGGCTCACCGAAATACAATTGA 58.320 40.909 13.59 0.00 39.70 2.57
2711 4794 4.637483 ATGGCTCACCGAAATACAATTG 57.363 40.909 3.24 3.24 39.70 2.32
2712 4795 4.704540 TGAATGGCTCACCGAAATACAATT 59.295 37.500 0.00 0.00 39.70 2.32
2714 4797 3.680490 TGAATGGCTCACCGAAATACAA 58.320 40.909 0.00 0.00 39.70 2.41
2716 4799 3.059597 CGATGAATGGCTCACCGAAATAC 60.060 47.826 0.00 0.00 44.67 1.89
2717 4800 3.130633 CGATGAATGGCTCACCGAAATA 58.869 45.455 0.00 0.00 44.67 1.40
2718 4801 1.942657 CGATGAATGGCTCACCGAAAT 59.057 47.619 0.00 0.00 44.67 2.17
2719 4802 1.338674 ACGATGAATGGCTCACCGAAA 60.339 47.619 0.00 0.00 44.67 3.46
2721 4804 0.460109 CACGATGAATGGCTCACCGA 60.460 55.000 0.00 0.00 44.67 4.69
2723 4806 1.869767 GATCACGATGAATGGCTCACC 59.130 52.381 0.00 0.00 36.69 4.02
2725 4808 1.408702 TCGATCACGATGAATGGCTCA 59.591 47.619 0.00 0.00 43.81 4.26
2726 4809 2.140065 TCGATCACGATGAATGGCTC 57.860 50.000 0.00 0.00 43.81 4.70
2738 4821 3.130516 TCTTCACCAGTACCATCGATCAC 59.869 47.826 0.00 0.00 0.00 3.06
2759 5025 6.022821 CAGAACGTAACAACTACTAGCTCTC 58.977 44.000 0.00 0.00 0.00 3.20
2761 5027 5.094134 CCAGAACGTAACAACTACTAGCTC 58.906 45.833 0.00 0.00 0.00 4.09
2764 5030 5.382618 ACCCAGAACGTAACAACTACTAG 57.617 43.478 0.00 0.00 0.00 2.57
2765 5031 5.301551 TCAACCCAGAACGTAACAACTACTA 59.698 40.000 0.00 0.00 0.00 1.82
2766 5032 4.099881 TCAACCCAGAACGTAACAACTACT 59.900 41.667 0.00 0.00 0.00 2.57
2767 5033 4.370917 TCAACCCAGAACGTAACAACTAC 58.629 43.478 0.00 0.00 0.00 2.73
2768 5034 4.669206 TCAACCCAGAACGTAACAACTA 57.331 40.909 0.00 0.00 0.00 2.24
2769 5035 3.547054 TCAACCCAGAACGTAACAACT 57.453 42.857 0.00 0.00 0.00 3.16
2783 5049 5.931724 CACTATCCAACCAAAATTTCAACCC 59.068 40.000 0.00 0.00 0.00 4.11
2795 5061 3.346315 CACAAGCATCACTATCCAACCA 58.654 45.455 0.00 0.00 0.00 3.67
2797 5063 3.127548 CACCACAAGCATCACTATCCAAC 59.872 47.826 0.00 0.00 0.00 3.77
2799 5065 2.571202 TCACCACAAGCATCACTATCCA 59.429 45.455 0.00 0.00 0.00 3.41
2800 5066 3.201290 CTCACCACAAGCATCACTATCC 58.799 50.000 0.00 0.00 0.00 2.59
2801 5067 3.118629 TCCTCACCACAAGCATCACTATC 60.119 47.826 0.00 0.00 0.00 2.08
2802 5068 2.840038 TCCTCACCACAAGCATCACTAT 59.160 45.455 0.00 0.00 0.00 2.12
2803 5069 2.256306 TCCTCACCACAAGCATCACTA 58.744 47.619 0.00 0.00 0.00 2.74
2804 5070 1.059098 TCCTCACCACAAGCATCACT 58.941 50.000 0.00 0.00 0.00 3.41
2821 5087 0.387929 CTCAATGGGCATGCACATCC 59.612 55.000 34.44 19.12 39.46 3.51
2834 5100 5.934043 TGGCCTTATCGTTATCATCTCAATG 59.066 40.000 3.32 0.00 0.00 2.82
2844 5110 2.223971 CCACGACTGGCCTTATCGTTAT 60.224 50.000 21.74 3.88 46.38 1.89
2886 5152 2.332362 TACACCTAGCTAGCGTGCGC 62.332 60.000 28.10 8.67 42.33 6.09
2887 5153 0.311165 ATACACCTAGCTAGCGTGCG 59.689 55.000 28.10 14.45 38.13 5.34
2888 5154 1.663445 CGATACACCTAGCTAGCGTGC 60.663 57.143 28.10 17.74 31.77 5.34
2889 5155 1.069159 CCGATACACCTAGCTAGCGTG 60.069 57.143 27.24 27.24 33.54 5.34
2890 5156 1.236628 CCGATACACCTAGCTAGCGT 58.763 55.000 15.74 15.76 0.00 5.07
2892 5158 1.068194 CAGCCGATACACCTAGCTAGC 60.068 57.143 15.74 6.62 31.23 3.42
2893 5159 2.505405 TCAGCCGATACACCTAGCTAG 58.495 52.381 14.20 14.20 31.23 3.42
2894 5160 2.651382 TCAGCCGATACACCTAGCTA 57.349 50.000 0.00 0.00 31.23 3.32
2896 5162 4.457834 AATATCAGCCGATACACCTAGC 57.542 45.455 0.00 0.00 36.94 3.42
2910 5176 5.163622 ACAATCCAAGCGGTGAAAATATCAG 60.164 40.000 0.00 0.00 39.19 2.90
2911 5177 4.704540 ACAATCCAAGCGGTGAAAATATCA 59.295 37.500 0.00 0.00 35.05 2.15
2912 5178 5.248870 ACAATCCAAGCGGTGAAAATATC 57.751 39.130 0.00 0.00 0.00 1.63
2914 5180 3.126171 CGACAATCCAAGCGGTGAAAATA 59.874 43.478 0.00 0.00 0.00 1.40
2915 5181 2.095263 CGACAATCCAAGCGGTGAAAAT 60.095 45.455 0.00 0.00 0.00 1.82
2916 5182 1.265635 CGACAATCCAAGCGGTGAAAA 59.734 47.619 0.00 0.00 0.00 2.29
2924 5190 2.325082 ACGCCACGACAATCCAAGC 61.325 57.895 0.00 0.00 0.00 4.01
2926 5192 0.033642 TACACGCCACGACAATCCAA 59.966 50.000 0.00 0.00 0.00 3.53
2927 5193 0.389296 CTACACGCCACGACAATCCA 60.389 55.000 0.00 0.00 0.00 3.41
2928 5194 1.693083 GCTACACGCCACGACAATCC 61.693 60.000 0.00 0.00 0.00 3.01
2929 5195 1.708027 GCTACACGCCACGACAATC 59.292 57.895 0.00 0.00 0.00 2.67
2930 5196 2.092291 CGCTACACGCCACGACAAT 61.092 57.895 0.00 0.00 34.21 2.71
2931 5197 2.731721 CGCTACACGCCACGACAA 60.732 61.111 0.00 0.00 34.21 3.18
2941 5207 0.516001 TCGTCTCAGACACGCTACAC 59.484 55.000 5.45 0.00 37.18 2.90
2942 5208 0.516001 GTCGTCTCAGACACGCTACA 59.484 55.000 5.45 0.00 40.65 2.74
2943 5209 0.516001 TGTCGTCTCAGACACGCTAC 59.484 55.000 5.45 0.00 45.18 3.58
2944 5210 2.922779 TGTCGTCTCAGACACGCTA 58.077 52.632 5.45 0.00 45.18 4.26
2945 5211 3.745912 TGTCGTCTCAGACACGCT 58.254 55.556 5.45 0.00 45.18 5.07
2950 5216 1.912110 GTTGCGTATGTCGTCTCAGAC 59.088 52.381 0.00 0.00 42.13 3.51
2951 5217 1.538075 TGTTGCGTATGTCGTCTCAGA 59.462 47.619 0.00 0.00 42.13 3.27
2952 5218 1.977188 TGTTGCGTATGTCGTCTCAG 58.023 50.000 0.00 0.00 42.13 3.35
2953 5219 2.094957 TGATGTTGCGTATGTCGTCTCA 60.095 45.455 0.00 0.00 42.13 3.27
2954 5220 2.526077 TGATGTTGCGTATGTCGTCTC 58.474 47.619 0.00 0.00 42.13 3.36
2955 5221 2.647529 TGATGTTGCGTATGTCGTCT 57.352 45.000 0.00 0.00 42.13 4.18
2956 5222 2.222729 GGTTGATGTTGCGTATGTCGTC 60.223 50.000 0.00 0.00 42.13 4.20
2957 5223 1.730064 GGTTGATGTTGCGTATGTCGT 59.270 47.619 0.00 0.00 42.13 4.34
2958 5224 1.999735 AGGTTGATGTTGCGTATGTCG 59.000 47.619 0.00 0.00 43.12 4.35
2959 5225 4.419522 AAAGGTTGATGTTGCGTATGTC 57.580 40.909 0.00 0.00 0.00 3.06
2960 5226 4.846779 AAAAGGTTGATGTTGCGTATGT 57.153 36.364 0.00 0.00 0.00 2.29
2961 5227 4.793216 GCTAAAAGGTTGATGTTGCGTATG 59.207 41.667 0.00 0.00 0.00 2.39
2962 5228 4.142469 GGCTAAAAGGTTGATGTTGCGTAT 60.142 41.667 0.00 0.00 0.00 3.06
2963 5229 3.189702 GGCTAAAAGGTTGATGTTGCGTA 59.810 43.478 0.00 0.00 0.00 4.42
2964 5230 2.030274 GGCTAAAAGGTTGATGTTGCGT 60.030 45.455 0.00 0.00 0.00 5.24
2965 5231 2.595386 GGCTAAAAGGTTGATGTTGCG 58.405 47.619 0.00 0.00 0.00 4.85
2966 5232 2.353704 GGGGCTAAAAGGTTGATGTTGC 60.354 50.000 0.00 0.00 0.00 4.17
2967 5233 2.233676 GGGGGCTAAAAGGTTGATGTTG 59.766 50.000 0.00 0.00 0.00 3.33
2968 5234 2.111792 AGGGGGCTAAAAGGTTGATGTT 59.888 45.455 0.00 0.00 0.00 2.71
2969 5235 1.716503 AGGGGGCTAAAAGGTTGATGT 59.283 47.619 0.00 0.00 0.00 3.06
2970 5236 2.532250 AGGGGGCTAAAAGGTTGATG 57.468 50.000 0.00 0.00 0.00 3.07
2971 5237 4.202738 TGTTTAGGGGGCTAAAAGGTTGAT 60.203 41.667 0.00 0.00 31.56 2.57
2972 5238 3.140519 TGTTTAGGGGGCTAAAAGGTTGA 59.859 43.478 0.00 0.00 31.56 3.18
2973 5239 3.502356 TGTTTAGGGGGCTAAAAGGTTG 58.498 45.455 0.00 0.00 31.56 3.77
2974 5240 3.907459 TGTTTAGGGGGCTAAAAGGTT 57.093 42.857 0.00 0.00 31.56 3.50
2977 5243 8.073467 TGATAATTTGTTTAGGGGGCTAAAAG 57.927 34.615 0.00 0.00 31.56 2.27
2978 5244 8.482128 CATGATAATTTGTTTAGGGGGCTAAAA 58.518 33.333 0.00 0.00 31.56 1.52
2981 5247 6.074648 CCATGATAATTTGTTTAGGGGGCTA 58.925 40.000 0.00 0.00 0.00 3.93
2982 5248 4.901250 CCATGATAATTTGTTTAGGGGGCT 59.099 41.667 0.00 0.00 0.00 5.19
2983 5249 4.653801 ACCATGATAATTTGTTTAGGGGGC 59.346 41.667 0.00 0.00 0.00 5.80
2984 5250 6.806668 AACCATGATAATTTGTTTAGGGGG 57.193 37.500 0.00 0.00 0.00 5.40
2985 5251 7.846066 TGAAACCATGATAATTTGTTTAGGGG 58.154 34.615 0.00 0.00 29.89 4.79
2995 5261 8.477256 ACGGATTTCATTGAAACCATGATAATT 58.523 29.630 13.80 0.00 34.23 1.40
2998 5264 7.093988 ACAACGGATTTCATTGAAACCATGATA 60.094 33.333 22.59 4.24 34.23 2.15
2999 5265 5.920193 ACGGATTTCATTGAAACCATGAT 57.080 34.783 13.80 0.00 34.23 2.45
3000 5266 5.010516 ACAACGGATTTCATTGAAACCATGA 59.989 36.000 22.59 3.56 34.23 3.07
3001 5267 5.118971 CACAACGGATTTCATTGAAACCATG 59.881 40.000 13.80 17.12 34.23 3.66
3002 5268 5.221422 ACACAACGGATTTCATTGAAACCAT 60.221 36.000 13.80 4.17 34.23 3.55
3003 5269 4.098654 ACACAACGGATTTCATTGAAACCA 59.901 37.500 13.80 0.00 34.23 3.67
3004 5270 4.616953 ACACAACGGATTTCATTGAAACC 58.383 39.130 13.80 14.68 34.23 3.27
3005 5271 6.582437 AAACACAACGGATTTCATTGAAAC 57.418 33.333 13.80 8.20 34.23 2.78
3007 5273 9.781834 GATATAAACACAACGGATTTCATTGAA 57.218 29.630 0.00 0.00 0.00 2.69
3008 5274 8.951243 TGATATAAACACAACGGATTTCATTGA 58.049 29.630 0.00 0.00 0.00 2.57
3015 5281 9.284594 CGAATTTTGATATAAACACAACGGATT 57.715 29.630 0.00 0.00 0.00 3.01
3017 5283 6.743627 GCGAATTTTGATATAAACACAACGGA 59.256 34.615 0.00 0.00 0.00 4.69
3019 5285 6.290334 CGGCGAATTTTGATATAAACACAACG 60.290 38.462 0.00 0.00 0.00 4.10
3020 5286 6.020995 CCGGCGAATTTTGATATAAACACAAC 60.021 38.462 9.30 0.00 0.00 3.32
3021 5287 6.030849 CCGGCGAATTTTGATATAAACACAA 58.969 36.000 9.30 0.00 0.00 3.33
3022 5288 5.124138 ACCGGCGAATTTTGATATAAACACA 59.876 36.000 9.30 0.00 0.00 3.72
3023 5289 5.575019 ACCGGCGAATTTTGATATAAACAC 58.425 37.500 9.30 0.00 0.00 3.32
3024 5290 5.821516 ACCGGCGAATTTTGATATAAACA 57.178 34.783 9.30 0.00 0.00 2.83
3026 5292 6.853720 TCAAACCGGCGAATTTTGATATAAA 58.146 32.000 20.13 4.98 34.96 1.40
3027 5293 6.438259 TCAAACCGGCGAATTTTGATATAA 57.562 33.333 20.13 5.50 34.96 0.98
3029 5295 4.974368 TCAAACCGGCGAATTTTGATAT 57.026 36.364 20.13 0.00 34.96 1.63
3031 5297 3.651803 TTCAAACCGGCGAATTTTGAT 57.348 38.095 22.78 0.00 38.65 2.57
3033 5299 4.210120 TCAAATTCAAACCGGCGAATTTTG 59.790 37.500 25.60 21.45 45.14 2.44
3034 5300 4.372656 TCAAATTCAAACCGGCGAATTTT 58.627 34.783 25.60 14.86 45.14 1.82
3036 5302 3.651803 TCAAATTCAAACCGGCGAATT 57.348 38.095 9.30 17.07 42.25 2.17
3038 5304 3.312828 CAATCAAATTCAAACCGGCGAA 58.687 40.909 9.30 2.02 0.00 4.70
3039 5305 2.352225 CCAATCAAATTCAAACCGGCGA 60.352 45.455 9.30 0.00 0.00 5.54
3041 5307 3.038788 ACCAATCAAATTCAAACCGGC 57.961 42.857 0.00 0.00 0.00 6.13
3042 5308 3.672867 CGAACCAATCAAATTCAAACCGG 59.327 43.478 0.00 0.00 0.00 5.28
3043 5309 4.541779 TCGAACCAATCAAATTCAAACCG 58.458 39.130 0.00 0.00 0.00 4.44
3044 5310 5.528870 ACTCGAACCAATCAAATTCAAACC 58.471 37.500 0.00 0.00 0.00 3.27
3045 5311 6.475402 ACAACTCGAACCAATCAAATTCAAAC 59.525 34.615 0.00 0.00 0.00 2.93
3057 5641 5.766150 ATTTTCATGACAACTCGAACCAA 57.234 34.783 0.00 0.00 0.00 3.67
3058 5642 8.611757 CATATATTTTCATGACAACTCGAACCA 58.388 33.333 0.00 0.00 0.00 3.67
3059 5643 8.826710 TCATATATTTTCATGACAACTCGAACC 58.173 33.333 0.00 0.00 0.00 3.62
3060 5644 9.855361 CTCATATATTTTCATGACAACTCGAAC 57.145 33.333 0.00 0.00 0.00 3.95
3062 5646 7.171508 GGCTCATATATTTTCATGACAACTCGA 59.828 37.037 0.00 0.00 0.00 4.04
3063 5647 7.172190 AGGCTCATATATTTTCATGACAACTCG 59.828 37.037 0.00 0.00 0.00 4.18
3066 5650 9.056005 TGTAGGCTCATATATTTTCATGACAAC 57.944 33.333 0.00 0.00 0.00 3.32
3067 5651 9.276590 CTGTAGGCTCATATATTTTCATGACAA 57.723 33.333 0.00 0.00 0.00 3.18
3068 5652 8.432013 ACTGTAGGCTCATATATTTTCATGACA 58.568 33.333 0.00 0.00 0.00 3.58
3069 5653 8.839310 ACTGTAGGCTCATATATTTTCATGAC 57.161 34.615 0.00 0.00 0.00 3.06
3070 5654 9.276590 CAACTGTAGGCTCATATATTTTCATGA 57.723 33.333 0.00 0.00 0.00 3.07
3071 5655 8.509690 CCAACTGTAGGCTCATATATTTTCATG 58.490 37.037 0.00 0.00 0.00 3.07
3072 5656 8.439971 TCCAACTGTAGGCTCATATATTTTCAT 58.560 33.333 0.00 0.00 0.00 2.57
3073 5657 7.801104 TCCAACTGTAGGCTCATATATTTTCA 58.199 34.615 0.00 0.00 0.00 2.69
3074 5658 8.725148 CATCCAACTGTAGGCTCATATATTTTC 58.275 37.037 0.00 0.00 0.00 2.29
3075 5659 7.667219 CCATCCAACTGTAGGCTCATATATTTT 59.333 37.037 0.00 0.00 0.00 1.82
3076 5660 7.170965 CCATCCAACTGTAGGCTCATATATTT 58.829 38.462 0.00 0.00 0.00 1.40
3078 5662 5.787494 ACCATCCAACTGTAGGCTCATATAT 59.213 40.000 0.00 0.00 0.00 0.86
3079 5663 5.155161 ACCATCCAACTGTAGGCTCATATA 58.845 41.667 0.00 0.00 0.00 0.86
3080 5664 3.976654 ACCATCCAACTGTAGGCTCATAT 59.023 43.478 0.00 0.00 0.00 1.78
3083 5667 1.656587 ACCATCCAACTGTAGGCTCA 58.343 50.000 0.00 0.00 0.00 4.26
3084 5668 2.359900 CAACCATCCAACTGTAGGCTC 58.640 52.381 0.00 0.00 0.00 4.70
3086 5670 0.811281 GCAACCATCCAACTGTAGGC 59.189 55.000 0.00 0.00 0.00 3.93
3087 5671 1.004745 AGGCAACCATCCAACTGTAGG 59.995 52.381 0.00 0.00 37.17 3.18
3092 5676 1.384191 GGGAGGCAACCATCCAACT 59.616 57.895 3.41 0.00 37.33 3.16
3093 5677 2.046285 CGGGAGGCAACCATCCAAC 61.046 63.158 3.41 0.00 37.33 3.77
3095 5679 4.424711 GCGGGAGGCAACCATCCA 62.425 66.667 3.41 0.00 42.87 3.41
3104 5688 1.668151 GGATACGAATGCGGGAGGC 60.668 63.158 0.00 0.00 43.17 4.70
3105 5689 4.675404 GGATACGAATGCGGGAGG 57.325 61.111 0.00 0.00 43.17 4.30
3117 5701 2.649614 GGGCTAGTCCGCGGATAC 59.350 66.667 33.58 20.63 34.94 2.24
3125 5709 2.521224 ATCCGTCCGGGCTAGTCC 60.521 66.667 3.66 2.21 34.94 3.85
3126 5710 2.728817 CATCCGTCCGGGCTAGTC 59.271 66.667 3.66 0.00 34.94 2.59
3127 5711 3.537874 GCATCCGTCCGGGCTAGT 61.538 66.667 3.66 0.00 34.94 2.57
3128 5712 3.227276 AGCATCCGTCCGGGCTAG 61.227 66.667 3.66 0.00 32.37 3.42
3132 5716 4.776322 TTGCAGCATCCGTCCGGG 62.776 66.667 0.00 0.00 35.59 5.73
3134 5718 1.298157 TTTCTTGCAGCATCCGTCCG 61.298 55.000 0.00 0.00 0.00 4.79
3136 5720 2.919229 CAAATTTCTTGCAGCATCCGTC 59.081 45.455 0.00 0.00 0.00 4.79
3138 5722 1.657094 GCAAATTTCTTGCAGCATCCG 59.343 47.619 0.00 0.00 44.34 4.18
3141 5725 1.673626 CCCGCAAATTTCTTGCAGCAT 60.674 47.619 9.86 0.00 45.14 3.79
3143 5727 0.319813 ACCCGCAAATTTCTTGCAGC 60.320 50.000 9.86 0.00 45.14 5.25
3144 5728 1.794116 CAACCCGCAAATTTCTTGCAG 59.206 47.619 9.86 3.22 45.14 4.41
3145 5729 1.863267 CAACCCGCAAATTTCTTGCA 58.137 45.000 9.86 0.00 45.14 4.08
3146 5730 0.512518 GCAACCCGCAAATTTCTTGC 59.487 50.000 0.00 0.00 41.79 4.01
3147 5731 1.147473 GGCAACCCGCAAATTTCTTG 58.853 50.000 0.00 0.00 45.17 3.02
3148 5732 0.755686 TGGCAACCCGCAAATTTCTT 59.244 45.000 0.00 0.00 45.17 2.52
3150 5734 1.464219 CAATGGCAACCCGCAAATTTC 59.536 47.619 0.00 0.00 45.17 2.17
3152 5736 0.683973 TCAATGGCAACCCGCAAATT 59.316 45.000 0.00 0.00 45.17 1.82
3153 5737 0.683973 TTCAATGGCAACCCGCAAAT 59.316 45.000 0.00 0.00 45.17 2.32
3154 5738 0.033228 CTTCAATGGCAACCCGCAAA 59.967 50.000 0.00 0.00 45.17 3.68
3155 5739 0.825425 TCTTCAATGGCAACCCGCAA 60.825 50.000 0.00 0.00 45.17 4.85
3156 5740 0.611618 ATCTTCAATGGCAACCCGCA 60.612 50.000 0.00 0.00 45.17 5.69
3157 5741 0.179129 CATCTTCAATGGCAACCCGC 60.179 55.000 0.00 0.00 41.28 6.13
3159 5743 0.176449 GGCATCTTCAATGGCAACCC 59.824 55.000 6.70 0.00 43.15 4.11
3160 5744 0.176449 GGGCATCTTCAATGGCAACC 59.824 55.000 12.76 0.00 45.13 3.77
3161 5745 1.188863 AGGGCATCTTCAATGGCAAC 58.811 50.000 12.76 0.00 45.13 4.17
3164 5748 2.378038 TGTTAGGGCATCTTCAATGGC 58.622 47.619 3.20 3.20 42.96 4.40
3166 5750 6.698008 TGTATTGTTAGGGCATCTTCAATG 57.302 37.500 13.66 0.00 33.92 2.82
3167 5751 7.716799 TTTGTATTGTTAGGGCATCTTCAAT 57.283 32.000 0.00 0.00 35.12 2.57
3169 5753 6.491745 TGTTTTGTATTGTTAGGGCATCTTCA 59.508 34.615 0.00 0.00 0.00 3.02
3170 5754 6.806739 GTGTTTTGTATTGTTAGGGCATCTTC 59.193 38.462 0.00 0.00 0.00 2.87
3173 5757 6.019779 TGTGTTTTGTATTGTTAGGGCATC 57.980 37.500 0.00 0.00 0.00 3.91
3174 5758 6.412362 TTGTGTTTTGTATTGTTAGGGCAT 57.588 33.333 0.00 0.00 0.00 4.40
3175 5759 5.854010 TTGTGTTTTGTATTGTTAGGGCA 57.146 34.783 0.00 0.00 0.00 5.36
3176 5760 7.722795 ATTTTGTGTTTTGTATTGTTAGGGC 57.277 32.000 0.00 0.00 0.00 5.19
3233 5857 7.124573 TGGATCCTCCGTGAATATAATATGG 57.875 40.000 14.23 0.00 40.17 2.74
3242 5866 3.761897 TGTTTTTGGATCCTCCGTGAAT 58.238 40.909 14.23 0.00 40.17 2.57
3248 5872 9.803315 GTCTTATATTTTGTTTTTGGATCCTCC 57.197 33.333 14.23 0.00 36.96 4.30
3259 5883 9.869757 GCCCAATTGTAGTCTTATATTTTGTTT 57.130 29.630 4.43 0.00 0.00 2.83
3274 5898 1.638529 TGGTTTGGGCCCAATTGTAG 58.361 50.000 37.41 0.00 35.70 2.74
3277 5901 0.036590 CCTTGGTTTGGGCCCAATTG 59.963 55.000 37.41 22.81 41.00 2.32
3375 5999 3.823304 AGTTCATCACTTCTTTCCCTTGC 59.177 43.478 0.00 0.00 27.32 4.01
3377 6001 4.104738 TGGAGTTCATCACTTCTTTCCCTT 59.895 41.667 0.00 0.00 35.01 3.95
3404 6028 3.423154 GGAGACAGTTTGGCGCGG 61.423 66.667 8.83 0.00 0.00 6.46
3405 6029 3.423154 GGGAGACAGTTTGGCGCG 61.423 66.667 0.00 0.00 0.00 6.86
3417 6041 1.274416 ACCTGGAGCCATTAAGGGAGA 60.274 52.381 11.08 0.00 38.09 3.71
3419 6043 1.213296 GACCTGGAGCCATTAAGGGA 58.787 55.000 11.08 0.00 38.09 4.20
3452 6077 4.142004 ACATACTGATGAAACCTACGGACC 60.142 45.833 0.00 0.00 36.48 4.46
3481 6106 2.358898 GGAGCGGCACAAATGATACAAT 59.641 45.455 1.45 0.00 0.00 2.71
3527 6152 1.632046 CGATGGCGGGTGTGTTGTAC 61.632 60.000 0.00 0.00 0.00 2.90
3545 6170 1.813753 CCATAGGCAACGGTGGACG 60.814 63.158 0.90 0.00 45.40 4.79
3560 6185 0.260816 AGGACAATGATGCTGCCCAT 59.739 50.000 0.00 0.00 36.70 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.