Multiple sequence alignment - TraesCS2B01G571800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G571800 chr2B 100.000 5135 0 0 1 5135 761996627 761991493 0.000000e+00 9483.0
1 TraesCS2B01G571800 chr2B 83.962 1484 121 63 429 1866 762003520 762002108 0.000000e+00 1314.0
2 TraesCS2B01G571800 chr2B 84.516 310 26 8 4483 4776 46099296 46098993 2.340000e-73 287.0
3 TraesCS2B01G571800 chr2B 86.256 211 19 8 4154 4363 46099645 46099444 2.410000e-53 220.0
4 TraesCS2B01G571800 chr2B 97.458 118 3 0 2907 3024 788660476 788660359 8.720000e-48 202.0
5 TraesCS2B01G571800 chr2B 95.902 122 5 0 2907 3028 642814932 642814811 1.130000e-46 198.0
6 TraesCS2B01G571800 chr2B 92.537 134 10 0 3887 4020 46099778 46099645 5.250000e-45 193.0
7 TraesCS2B01G571800 chr2B 91.860 86 6 1 4364 4449 648375649 648375733 9.030000e-23 119.0
8 TraesCS2B01G571800 chr2B 86.207 87 11 1 4363 4449 649474813 649474728 5.470000e-15 93.5
9 TraesCS2B01G571800 chr2B 86.207 58 6 2 610 665 776555272 776555329 1.540000e-05 62.1
10 TraesCS2B01G571800 chr2A 89.910 2230 111 55 734 2909 752875323 752873154 0.000000e+00 2767.0
11 TraesCS2B01G571800 chr2A 85.656 1234 131 17 3058 4260 752873094 752871876 0.000000e+00 1256.0
12 TraesCS2B01G571800 chr2A 84.515 536 34 35 4614 5135 752871348 752870848 7.730000e-133 484.0
13 TraesCS2B01G571800 chr2A 88.776 196 22 0 417 612 752904094 752903899 1.850000e-59 241.0
14 TraesCS2B01G571800 chr2A 79.470 151 10 13 608 742 752883318 752883173 2.550000e-13 87.9
15 TraesCS2B01G571800 chr2A 93.333 45 3 0 623 667 565259668 565259712 3.320000e-07 67.6
16 TraesCS2B01G571800 chr2D 92.216 1336 52 21 1596 2908 621069949 621068643 0.000000e+00 1844.0
17 TraesCS2B01G571800 chr2D 87.318 1238 110 24 3025 4233 621068641 621067422 0.000000e+00 1373.0
18 TraesCS2B01G571800 chr2D 92.760 953 35 18 669 1594 621070930 621069985 0.000000e+00 1347.0
19 TraesCS2B01G571800 chr2D 89.189 481 31 13 421 893 621087941 621087474 9.580000e-162 580.0
20 TraesCS2B01G571800 chr2D 81.115 556 63 34 4592 5135 621066859 621066334 1.720000e-109 407.0
21 TraesCS2B01G571800 chr2D 95.745 235 9 1 1 234 433211670 433211436 1.350000e-100 377.0
22 TraesCS2B01G571800 chr2D 91.566 249 20 1 417 665 621071349 621071102 4.920000e-90 342.0
23 TraesCS2B01G571800 chr2D 87.594 266 18 7 1137 1402 621086934 621086684 1.400000e-75 294.0
24 TraesCS2B01G571800 chr2D 91.748 206 15 2 1 205 447248295 447248499 8.420000e-73 285.0
25 TraesCS2B01G571800 chr2D 89.202 213 21 2 1435 1645 621086389 621086177 1.100000e-66 265.0
26 TraesCS2B01G571800 chr2D 95.652 161 7 0 256 416 433211374 433211214 5.100000e-65 259.0
27 TraesCS2B01G571800 chr2D 95.946 148 6 0 267 414 447248500 447248647 1.850000e-59 241.0
28 TraesCS2B01G571800 chr2D 87.778 90 9 2 4360 4449 651423559 651423646 2.530000e-18 104.0
29 TraesCS2B01G571800 chr2D 85.915 71 7 2 621 688 617726974 617727044 7.130000e-09 73.1
30 TraesCS2B01G571800 chr6A 84.867 826 68 22 1124 1923 429226676 429227470 0.000000e+00 780.0
31 TraesCS2B01G571800 chr6A 90.110 91 8 1 4359 4449 506234615 506234704 3.250000e-22 117.0
32 TraesCS2B01G571800 chr6B 99.052 422 4 0 1 422 480389878 480390299 0.000000e+00 758.0
33 TraesCS2B01G571800 chr6B 84.083 289 21 6 1048 1335 269744386 269744122 6.600000e-64 255.0
34 TraesCS2B01G571800 chr6B 96.694 121 4 0 2907 3027 181705163 181705043 8.720000e-48 202.0
35 TraesCS2B01G571800 chr6B 84.706 85 11 1 4361 4445 1135959 1135877 3.290000e-12 84.2
36 TraesCS2B01G571800 chr6B 84.884 86 4 4 4364 4449 123824478 123824554 1.530000e-10 78.7
37 TraesCS2B01G571800 chr1B 88.542 480 38 9 3887 4363 666189075 666188610 2.680000e-157 566.0
38 TraesCS2B01G571800 chr1B 88.927 289 22 4 1048 1335 97673280 97673001 1.060000e-91 348.0
39 TraesCS2B01G571800 chr1B 95.238 126 5 1 2908 3033 12924281 12924405 1.130000e-46 198.0
40 TraesCS2B01G571800 chr4A 87.421 477 44 11 3889 4363 671017938 671017476 7.570000e-148 534.0
41 TraesCS2B01G571800 chr4A 93.191 235 15 1 1 234 731199827 731199593 1.370000e-90 344.0
42 TraesCS2B01G571800 chr4A 92.766 235 16 1 1 234 673479586 673479820 6.370000e-89 339.0
43 TraesCS2B01G571800 chr4A 96.273 161 6 0 256 416 673479884 673480044 1.100000e-66 265.0
44 TraesCS2B01G571800 chr4A 94.410 161 9 0 256 416 731199530 731199370 1.100000e-61 248.0
45 TraesCS2B01G571800 chr4A 95.804 143 6 0 277 419 673474998 673474856 1.110000e-56 231.0
46 TraesCS2B01G571800 chr4A 99.153 118 1 0 2908 3025 681921490 681921373 4.030000e-51 213.0
47 TraesCS2B01G571800 chr5D 80.721 638 67 24 1034 1646 31939611 31939005 3.650000e-121 446.0
48 TraesCS2B01G571800 chr5D 80.691 637 68 22 1033 1646 23023642 23023038 1.310000e-120 444.0
49 TraesCS2B01G571800 chr5D 82.821 390 51 12 1250 1624 106938264 106938652 8.240000e-88 335.0
50 TraesCS2B01G571800 chr7D 80.499 641 60 28 1033 1646 569306513 569307115 1.020000e-116 431.0
51 TraesCS2B01G571800 chr7D 94.894 235 11 1 1 234 7472961 7472727 2.920000e-97 366.0
52 TraesCS2B01G571800 chr7D 92.771 166 11 1 256 421 7472665 7472501 6.640000e-59 239.0
53 TraesCS2B01G571800 chr7D 96.000 125 3 2 2902 3024 579147033 579147157 8.720000e-48 202.0
54 TraesCS2B01G571800 chr6D 80.156 640 65 24 1033 1646 367273319 367272716 6.150000e-114 422.0
55 TraesCS2B01G571800 chr3D 92.766 235 16 1 1 234 118416791 118416557 6.370000e-89 339.0
56 TraesCS2B01G571800 chr3D 96.296 162 6 0 256 417 118416494 118416333 3.050000e-67 267.0
57 TraesCS2B01G571800 chr3D 93.023 43 3 0 623 665 386613365 386613323 4.290000e-06 63.9
58 TraesCS2B01G571800 chr3B 77.760 643 77 29 1029 1646 215400521 215399920 8.240000e-88 335.0
59 TraesCS2B01G571800 chr3B 83.391 289 22 7 1048 1335 88358421 88358684 1.430000e-60 244.0
60 TraesCS2B01G571800 chr7A 92.340 235 17 1 1 234 709997765 709997999 2.960000e-87 333.0
61 TraesCS2B01G571800 chr7A 95.679 162 7 0 256 417 709998063 709998224 1.420000e-65 261.0
62 TraesCS2B01G571800 chr7A 97.521 121 3 0 2908 3028 681620046 681619926 1.870000e-49 207.0
63 TraesCS2B01G571800 chr7A 95.789 95 4 0 2624 2718 85740231 85740137 2.480000e-33 154.0
64 TraesCS2B01G571800 chr5B 82.020 406 50 14 1250 1633 115868939 115869343 1.780000e-84 324.0
65 TraesCS2B01G571800 chr5A 80.513 390 42 17 1250 1624 136640958 136641328 8.470000e-68 268.0
66 TraesCS2B01G571800 chr4B 99.153 118 1 0 2908 3025 422040254 422040371 4.030000e-51 213.0
67 TraesCS2B01G571800 chr4B 86.325 117 15 1 1036 1151 239636535 239636419 5.400000e-25 126.0
68 TraesCS2B01G571800 chr4B 88.506 87 9 1 4363 4449 451219927 451219842 2.530000e-18 104.0
69 TraesCS2B01G571800 chr4B 88.506 87 9 1 4363 4449 451285951 451285866 2.530000e-18 104.0
70 TraesCS2B01G571800 chr4B 90.385 52 4 1 614 665 621950 622000 3.320000e-07 67.6
71 TraesCS2B01G571800 chr1A 95.763 118 5 0 2907 3024 569891933 569891816 1.890000e-44 191.0
72 TraesCS2B01G571800 chr1D 96.296 81 3 0 1564 1644 10885271 10885351 3.230000e-27 134.0
73 TraesCS2B01G571800 chr4D 95.062 81 4 0 1564 1644 412663605 412663685 1.500000e-25 128.0
74 TraesCS2B01G571800 chr7B 88.750 80 9 0 4364 4443 239374061 239374140 1.180000e-16 99.0
75 TraesCS2B01G571800 chr3A 95.349 43 2 0 623 665 46990015 46989973 9.230000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G571800 chr2B 761991493 761996627 5134 True 9483.000000 9483 100.000000 1 5135 1 chr2B.!!$R3 5134
1 TraesCS2B01G571800 chr2B 762002108 762003520 1412 True 1314.000000 1314 83.962000 429 1866 1 chr2B.!!$R4 1437
2 TraesCS2B01G571800 chr2B 46098993 46099778 785 True 233.333333 287 87.769667 3887 4776 3 chr2B.!!$R6 889
3 TraesCS2B01G571800 chr2A 752870848 752875323 4475 True 1502.333333 2767 86.693667 734 5135 3 chr2A.!!$R3 4401
4 TraesCS2B01G571800 chr2D 621066334 621071349 5015 True 1062.600000 1844 88.995000 417 5135 5 chr2D.!!$R2 4718
5 TraesCS2B01G571800 chr2D 621086177 621087941 1764 True 379.666667 580 88.661667 421 1645 3 chr2D.!!$R3 1224
6 TraesCS2B01G571800 chr6A 429226676 429227470 794 False 780.000000 780 84.867000 1124 1923 1 chr6A.!!$F1 799
7 TraesCS2B01G571800 chr5D 31939005 31939611 606 True 446.000000 446 80.721000 1034 1646 1 chr5D.!!$R2 612
8 TraesCS2B01G571800 chr5D 23023038 23023642 604 True 444.000000 444 80.691000 1033 1646 1 chr5D.!!$R1 613
9 TraesCS2B01G571800 chr7D 569306513 569307115 602 False 431.000000 431 80.499000 1033 1646 1 chr7D.!!$F1 613
10 TraesCS2B01G571800 chr6D 367272716 367273319 603 True 422.000000 422 80.156000 1033 1646 1 chr6D.!!$R1 613
11 TraesCS2B01G571800 chr3B 215399920 215400521 601 True 335.000000 335 77.760000 1029 1646 1 chr3B.!!$R1 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 287 0.031616 TGAACAAGCCAGGGGGTTTT 60.032 50.0 0.00 0.00 40.84 2.43 F
338 339 0.038166 TCCCACCTTTGATCAGTGCC 59.962 55.0 7.82 0.00 0.00 5.01 F
1835 2761 0.393808 TGATAGGCCCCTTTTCGTGC 60.394 55.0 0.00 0.00 0.00 5.34 F
2798 3739 0.179020 TGGTAGCACCAGGCATATGC 60.179 55.0 19.79 19.79 44.79 3.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 2632 0.879090 GGGGCAAAAGTAGTTCCACG 59.121 55.000 0.00 0.0 0.00 4.94 R
2014 2941 3.089573 TGCTGCATATGACGAAGAGAG 57.910 47.619 6.97 0.0 0.00 3.20 R
2908 3856 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.0 46.06 3.85 R
4465 5484 0.309612 GTTGTGAAATGCCGTTCGGT 59.690 50.000 12.81 0.0 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.777536 AGCCAATGGAGACCTGTCA 58.222 52.632 2.05 0.00 0.00 3.58
19 20 0.326264 AGCCAATGGAGACCTGTCAC 59.674 55.000 2.05 0.00 0.00 3.67
20 21 1.021390 GCCAATGGAGACCTGTCACG 61.021 60.000 2.05 0.00 0.00 4.35
21 22 0.608130 CCAATGGAGACCTGTCACGA 59.392 55.000 0.00 0.00 0.00 4.35
22 23 1.673033 CCAATGGAGACCTGTCACGAC 60.673 57.143 0.00 0.00 0.00 4.34
23 24 1.000843 CAATGGAGACCTGTCACGACA 59.999 52.381 0.00 0.00 39.32 4.35
36 37 4.891566 CGACAGACGGAGGAAAGG 57.108 61.111 0.00 0.00 38.46 3.11
37 38 1.965219 CGACAGACGGAGGAAAGGT 59.035 57.895 0.00 0.00 38.46 3.50
38 39 0.109226 CGACAGACGGAGGAAAGGTC 60.109 60.000 0.00 0.00 38.46 3.85
39 40 0.966920 GACAGACGGAGGAAAGGTCA 59.033 55.000 0.00 0.00 33.18 4.02
40 41 1.550976 GACAGACGGAGGAAAGGTCAT 59.449 52.381 0.00 0.00 33.18 3.06
41 42 1.276421 ACAGACGGAGGAAAGGTCATG 59.724 52.381 0.00 0.00 33.18 3.07
42 43 0.905357 AGACGGAGGAAAGGTCATGG 59.095 55.000 0.00 0.00 33.18 3.66
43 44 0.744771 GACGGAGGAAAGGTCATGGC 60.745 60.000 0.00 0.00 0.00 4.40
44 45 1.201429 ACGGAGGAAAGGTCATGGCT 61.201 55.000 0.00 0.00 0.00 4.75
45 46 0.035056 CGGAGGAAAGGTCATGGCTT 60.035 55.000 0.00 0.00 0.00 4.35
46 47 1.756430 GGAGGAAAGGTCATGGCTTC 58.244 55.000 0.00 0.00 0.00 3.86
47 48 1.004745 GGAGGAAAGGTCATGGCTTCA 59.995 52.381 0.00 0.00 0.00 3.02
48 49 2.363683 GAGGAAAGGTCATGGCTTCAG 58.636 52.381 0.00 0.00 0.00 3.02
49 50 1.707427 AGGAAAGGTCATGGCTTCAGT 59.293 47.619 0.00 0.00 0.00 3.41
50 51 2.087646 GGAAAGGTCATGGCTTCAGTC 58.912 52.381 0.00 0.00 0.00 3.51
51 52 1.734465 GAAAGGTCATGGCTTCAGTCG 59.266 52.381 0.00 0.00 0.00 4.18
52 53 0.674895 AAGGTCATGGCTTCAGTCGC 60.675 55.000 0.00 0.00 0.00 5.19
69 70 4.227134 CCACCGGCCGAGGATGAG 62.227 72.222 30.73 10.69 34.73 2.90
70 71 3.461773 CACCGGCCGAGGATGAGT 61.462 66.667 30.73 11.48 34.73 3.41
71 72 2.683933 ACCGGCCGAGGATGAGTT 60.684 61.111 30.73 0.00 34.73 3.01
72 73 2.202932 CCGGCCGAGGATGAGTTG 60.203 66.667 30.73 0.44 0.00 3.16
73 74 2.579201 CGGCCGAGGATGAGTTGT 59.421 61.111 24.07 0.00 0.00 3.32
74 75 1.672854 CCGGCCGAGGATGAGTTGTA 61.673 60.000 30.73 0.00 0.00 2.41
75 76 0.249073 CGGCCGAGGATGAGTTGTAG 60.249 60.000 24.07 0.00 0.00 2.74
76 77 0.530870 GGCCGAGGATGAGTTGTAGC 60.531 60.000 0.00 0.00 0.00 3.58
77 78 0.530870 GCCGAGGATGAGTTGTAGCC 60.531 60.000 0.00 0.00 0.00 3.93
78 79 0.249073 CCGAGGATGAGTTGTAGCCG 60.249 60.000 0.00 0.00 0.00 5.52
79 80 0.738975 CGAGGATGAGTTGTAGCCGA 59.261 55.000 0.00 0.00 0.00 5.54
80 81 1.338337 CGAGGATGAGTTGTAGCCGAT 59.662 52.381 0.00 0.00 0.00 4.18
81 82 2.748605 GAGGATGAGTTGTAGCCGATG 58.251 52.381 0.00 0.00 0.00 3.84
82 83 2.101582 GAGGATGAGTTGTAGCCGATGT 59.898 50.000 0.00 0.00 0.00 3.06
83 84 3.296854 AGGATGAGTTGTAGCCGATGTA 58.703 45.455 0.00 0.00 0.00 2.29
84 85 3.319405 AGGATGAGTTGTAGCCGATGTAG 59.681 47.826 0.00 0.00 0.00 2.74
85 86 3.553096 GGATGAGTTGTAGCCGATGTAGG 60.553 52.174 0.00 0.00 0.00 3.18
86 87 1.754803 TGAGTTGTAGCCGATGTAGGG 59.245 52.381 0.00 0.00 0.00 3.53
92 93 4.603946 GCCGATGTAGGGCCCGTC 62.604 72.222 18.44 14.34 44.97 4.79
93 94 4.280494 CCGATGTAGGGCCCGTCG 62.280 72.222 25.26 25.26 40.21 5.12
94 95 4.944372 CGATGTAGGGCCCGTCGC 62.944 72.222 18.44 8.59 34.92 5.19
95 96 3.537874 GATGTAGGGCCCGTCGCT 61.538 66.667 18.44 0.00 41.27 4.93
96 97 3.792053 GATGTAGGGCCCGTCGCTG 62.792 68.421 18.44 0.00 38.54 5.18
110 111 4.821589 GCTGCCGTCGGAGGGAAG 62.822 72.222 20.30 19.41 31.83 3.46
111 112 4.148825 CTGCCGTCGGAGGGAAGG 62.149 72.222 20.30 5.46 45.96 3.46
112 113 4.689549 TGCCGTCGGAGGGAAGGA 62.690 66.667 20.30 0.00 46.09 3.36
113 114 4.144703 GCCGTCGGAGGGAAGGAC 62.145 72.222 20.30 0.00 46.09 3.85
114 115 2.678934 CCGTCGGAGGGAAGGACA 60.679 66.667 11.23 0.00 46.09 4.02
115 116 2.058595 CCGTCGGAGGGAAGGACAT 61.059 63.158 11.23 0.00 46.09 3.06
116 117 0.754217 CCGTCGGAGGGAAGGACATA 60.754 60.000 11.23 0.00 46.09 2.29
117 118 1.108776 CGTCGGAGGGAAGGACATAA 58.891 55.000 0.00 0.00 0.00 1.90
118 119 1.202382 CGTCGGAGGGAAGGACATAAC 60.202 57.143 0.00 0.00 0.00 1.89
119 120 2.108970 GTCGGAGGGAAGGACATAACT 58.891 52.381 0.00 0.00 0.00 2.24
120 121 2.101082 GTCGGAGGGAAGGACATAACTC 59.899 54.545 0.00 0.00 0.00 3.01
121 122 1.067212 CGGAGGGAAGGACATAACTCG 59.933 57.143 0.00 0.00 0.00 4.18
122 123 2.385803 GGAGGGAAGGACATAACTCGA 58.614 52.381 0.00 0.00 0.00 4.04
123 124 2.362717 GGAGGGAAGGACATAACTCGAG 59.637 54.545 11.84 11.84 0.00 4.04
124 125 3.025262 GAGGGAAGGACATAACTCGAGT 58.975 50.000 13.58 13.58 0.00 4.18
125 126 3.025262 AGGGAAGGACATAACTCGAGTC 58.975 50.000 20.33 5.82 0.00 3.36
126 127 2.223525 GGGAAGGACATAACTCGAGTCG 60.224 54.545 20.33 12.94 33.18 4.18
127 128 2.452105 GAAGGACATAACTCGAGTCGC 58.548 52.381 20.33 6.54 33.18 5.19
128 129 0.739561 AGGACATAACTCGAGTCGCC 59.260 55.000 20.33 15.00 33.18 5.54
129 130 0.454600 GGACATAACTCGAGTCGCCA 59.545 55.000 20.33 5.05 33.18 5.69
130 131 1.546834 GACATAACTCGAGTCGCCAC 58.453 55.000 20.33 7.35 0.00 5.01
131 132 0.172803 ACATAACTCGAGTCGCCACC 59.827 55.000 20.33 0.00 0.00 4.61
132 133 0.866061 CATAACTCGAGTCGCCACCG 60.866 60.000 20.33 0.00 0.00 4.94
133 134 2.001361 ATAACTCGAGTCGCCACCGG 62.001 60.000 20.33 0.00 34.56 5.28
144 145 4.227134 CCACCGGCGGAGGATGAG 62.227 72.222 34.97 9.37 35.40 2.90
145 146 4.899239 CACCGGCGGAGGATGAGC 62.899 72.222 35.78 0.00 34.73 4.26
172 173 3.060615 CAGAGGGCCTGTTGCTGC 61.061 66.667 12.95 0.00 40.92 5.25
178 179 3.818787 GCCTGTTGCTGCCATCGG 61.819 66.667 0.00 0.00 36.87 4.18
179 180 2.046023 CCTGTTGCTGCCATCGGA 60.046 61.111 0.00 0.00 0.00 4.55
180 181 2.110967 CCTGTTGCTGCCATCGGAG 61.111 63.158 0.00 0.00 0.00 4.63
181 182 2.046023 TGTTGCTGCCATCGGAGG 60.046 61.111 0.00 0.00 0.00 4.30
182 183 2.825836 GTTGCTGCCATCGGAGGG 60.826 66.667 3.90 3.90 0.00 4.30
183 184 4.113815 TTGCTGCCATCGGAGGGG 62.114 66.667 11.11 2.40 0.00 4.79
201 202 3.031457 CCGTCGTTGCCGTCGAAA 61.031 61.111 0.00 0.00 46.05 3.46
202 203 2.464189 CGTCGTTGCCGTCGAAAG 59.536 61.111 0.00 0.00 46.05 2.62
203 204 2.851104 GTCGTTGCCGTCGAAAGG 59.149 61.111 3.96 3.96 39.01 3.11
210 211 3.431725 CCGTCGAAAGGCAAGGGC 61.432 66.667 0.00 0.00 40.13 5.19
211 212 2.358737 CGTCGAAAGGCAAGGGCT 60.359 61.111 0.00 0.00 41.24 5.19
212 213 2.391389 CGTCGAAAGGCAAGGGCTC 61.391 63.158 0.00 0.00 37.50 4.70
213 214 1.302511 GTCGAAAGGCAAGGGCTCA 60.303 57.895 0.00 0.00 37.50 4.26
214 215 1.302511 TCGAAAGGCAAGGGCTCAC 60.303 57.895 0.00 0.00 37.50 3.51
215 216 2.680913 CGAAAGGCAAGGGCTCACG 61.681 63.158 0.00 0.00 37.50 4.35
216 217 2.282462 AAAGGCAAGGGCTCACGG 60.282 61.111 0.00 0.00 37.50 4.94
232 233 3.428282 GGCCGCCGAAACGTGATT 61.428 61.111 0.00 0.00 0.00 2.57
233 234 2.097728 GCCGCCGAAACGTGATTC 59.902 61.111 0.00 0.00 0.00 2.52
234 235 2.673114 GCCGCCGAAACGTGATTCA 61.673 57.895 0.00 0.00 0.00 2.57
235 236 1.131826 CCGCCGAAACGTGATTCAC 59.868 57.895 6.73 6.73 0.00 3.18
258 259 6.883918 CGTTAAGATTGAAACGTAAACCAC 57.116 37.500 0.00 0.00 42.57 4.16
259 260 5.847515 CGTTAAGATTGAAACGTAAACCACC 59.152 40.000 0.00 0.00 42.57 4.61
260 261 6.293027 CGTTAAGATTGAAACGTAAACCACCT 60.293 38.462 0.00 0.00 42.57 4.00
261 262 7.420002 GTTAAGATTGAAACGTAAACCACCTT 58.580 34.615 0.00 0.00 0.00 3.50
262 263 5.432885 AGATTGAAACGTAAACCACCTTG 57.567 39.130 0.00 0.00 0.00 3.61
263 264 5.127491 AGATTGAAACGTAAACCACCTTGA 58.873 37.500 0.00 0.00 0.00 3.02
264 265 5.768164 AGATTGAAACGTAAACCACCTTGAT 59.232 36.000 0.00 0.00 0.00 2.57
265 266 4.822036 TGAAACGTAAACCACCTTGATG 57.178 40.909 0.00 0.00 0.00 3.07
266 267 3.566322 TGAAACGTAAACCACCTTGATGG 59.434 43.478 0.00 0.00 46.10 3.51
277 278 1.619654 CCTTGATGGTGAACAAGCCA 58.380 50.000 0.00 0.00 41.15 4.75
278 279 1.542915 CCTTGATGGTGAACAAGCCAG 59.457 52.381 0.00 0.00 41.15 4.85
279 280 1.542915 CTTGATGGTGAACAAGCCAGG 59.457 52.381 0.00 0.00 38.27 4.45
280 281 0.251297 TGATGGTGAACAAGCCAGGG 60.251 55.000 0.00 0.00 38.27 4.45
281 282 0.967380 GATGGTGAACAAGCCAGGGG 60.967 60.000 0.00 0.00 38.27 4.79
282 283 2.283173 GGTGAACAAGCCAGGGGG 60.283 66.667 0.00 0.00 37.18 5.40
283 284 2.520968 GTGAACAAGCCAGGGGGT 59.479 61.111 0.00 0.00 36.17 4.95
284 285 1.152546 GTGAACAAGCCAGGGGGTT 60.153 57.895 0.00 0.00 44.85 4.11
285 286 0.759060 GTGAACAAGCCAGGGGGTTT 60.759 55.000 0.00 0.00 40.84 3.27
286 287 0.031616 TGAACAAGCCAGGGGGTTTT 60.032 50.000 0.00 0.00 40.84 2.43
287 288 0.679505 GAACAAGCCAGGGGGTTTTC 59.320 55.000 0.00 2.59 40.84 2.29
288 289 0.264657 AACAAGCCAGGGGGTTTTCT 59.735 50.000 0.00 0.00 40.84 2.52
289 290 0.469892 ACAAGCCAGGGGGTTTTCTG 60.470 55.000 0.00 0.00 40.84 3.02
290 291 1.533994 AAGCCAGGGGGTTTTCTGC 60.534 57.895 0.00 0.00 40.84 4.26
291 292 2.023760 AAGCCAGGGGGTTTTCTGCT 62.024 55.000 0.00 0.00 40.84 4.24
292 293 1.140134 AGCCAGGGGGTTTTCTGCTA 61.140 55.000 0.00 0.00 36.17 3.49
293 294 0.251608 GCCAGGGGGTTTTCTGCTAA 60.252 55.000 0.00 0.00 36.17 3.09
294 295 1.545841 CCAGGGGGTTTTCTGCTAAC 58.454 55.000 0.00 0.00 0.00 2.34
295 296 1.075536 CCAGGGGGTTTTCTGCTAACT 59.924 52.381 0.00 0.00 0.00 2.24
296 297 2.162681 CAGGGGGTTTTCTGCTAACTG 58.837 52.381 0.00 0.00 0.00 3.16
297 298 1.780919 AGGGGGTTTTCTGCTAACTGT 59.219 47.619 0.00 0.00 0.00 3.55
298 299 1.886542 GGGGGTTTTCTGCTAACTGTG 59.113 52.381 0.00 0.00 0.00 3.66
299 300 2.583143 GGGGTTTTCTGCTAACTGTGT 58.417 47.619 0.00 0.00 0.00 3.72
300 301 2.956333 GGGGTTTTCTGCTAACTGTGTT 59.044 45.455 0.00 0.00 0.00 3.32
301 302 3.383505 GGGGTTTTCTGCTAACTGTGTTT 59.616 43.478 0.00 0.00 0.00 2.83
302 303 4.581409 GGGGTTTTCTGCTAACTGTGTTTA 59.419 41.667 0.00 0.00 0.00 2.01
303 304 5.068067 GGGGTTTTCTGCTAACTGTGTTTAA 59.932 40.000 0.00 0.00 0.00 1.52
304 305 6.206498 GGGTTTTCTGCTAACTGTGTTTAAG 58.794 40.000 0.00 0.00 0.00 1.85
305 306 6.183360 GGGTTTTCTGCTAACTGTGTTTAAGT 60.183 38.462 0.00 0.00 0.00 2.24
306 307 6.691388 GGTTTTCTGCTAACTGTGTTTAAGTG 59.309 38.462 0.00 0.00 0.00 3.16
307 308 6.371809 TTTCTGCTAACTGTGTTTAAGTGG 57.628 37.500 0.00 0.00 0.00 4.00
308 309 5.284861 TCTGCTAACTGTGTTTAAGTGGA 57.715 39.130 0.00 0.00 0.00 4.02
309 310 5.865085 TCTGCTAACTGTGTTTAAGTGGAT 58.135 37.500 0.00 0.00 0.00 3.41
310 311 5.932303 TCTGCTAACTGTGTTTAAGTGGATC 59.068 40.000 0.00 0.00 0.00 3.36
311 312 5.616270 TGCTAACTGTGTTTAAGTGGATCA 58.384 37.500 0.00 0.00 0.00 2.92
312 313 6.237901 TGCTAACTGTGTTTAAGTGGATCAT 58.762 36.000 0.00 0.00 0.00 2.45
313 314 6.714810 TGCTAACTGTGTTTAAGTGGATCATT 59.285 34.615 0.00 0.00 0.00 2.57
314 315 7.880713 TGCTAACTGTGTTTAAGTGGATCATTA 59.119 33.333 0.00 0.00 0.00 1.90
315 316 8.391106 GCTAACTGTGTTTAAGTGGATCATTAG 58.609 37.037 0.00 0.00 0.00 1.73
316 317 9.653287 CTAACTGTGTTTAAGTGGATCATTAGA 57.347 33.333 0.00 0.00 0.00 2.10
317 318 8.553459 AACTGTGTTTAAGTGGATCATTAGAG 57.447 34.615 0.00 0.00 0.00 2.43
318 319 7.907389 ACTGTGTTTAAGTGGATCATTAGAGA 58.093 34.615 0.00 0.00 0.00 3.10
319 320 8.543774 ACTGTGTTTAAGTGGATCATTAGAGAT 58.456 33.333 0.00 0.00 0.00 2.75
320 321 8.948631 TGTGTTTAAGTGGATCATTAGAGATC 57.051 34.615 0.00 0.00 42.89 2.75
330 331 6.179906 GATCATTAGAGATCCCACCTTTGA 57.820 41.667 0.00 0.00 38.75 2.69
331 332 6.776887 ATCATTAGAGATCCCACCTTTGAT 57.223 37.500 0.00 0.00 0.00 2.57
332 333 6.179906 TCATTAGAGATCCCACCTTTGATC 57.820 41.667 0.00 0.00 38.10 2.92
333 334 5.667172 TCATTAGAGATCCCACCTTTGATCA 59.333 40.000 0.00 0.00 39.86 2.92
334 335 5.620738 TTAGAGATCCCACCTTTGATCAG 57.379 43.478 0.00 0.00 39.86 2.90
335 336 3.458831 AGAGATCCCACCTTTGATCAGT 58.541 45.455 0.00 0.00 39.86 3.41
336 337 3.199508 AGAGATCCCACCTTTGATCAGTG 59.800 47.826 6.60 6.60 39.86 3.66
337 338 2.019984 GATCCCACCTTTGATCAGTGC 58.980 52.381 7.82 0.00 37.81 4.40
338 339 0.038166 TCCCACCTTTGATCAGTGCC 59.962 55.000 7.82 0.00 0.00 5.01
339 340 1.308069 CCCACCTTTGATCAGTGCCG 61.308 60.000 7.82 0.00 0.00 5.69
340 341 0.606401 CCACCTTTGATCAGTGCCGT 60.606 55.000 7.82 0.00 0.00 5.68
341 342 1.238439 CACCTTTGATCAGTGCCGTT 58.762 50.000 0.00 0.00 0.00 4.44
342 343 1.197721 CACCTTTGATCAGTGCCGTTC 59.802 52.381 0.00 0.00 0.00 3.95
343 344 0.443869 CCTTTGATCAGTGCCGTTCG 59.556 55.000 0.00 0.00 0.00 3.95
344 345 1.148310 CTTTGATCAGTGCCGTTCGT 58.852 50.000 0.00 0.00 0.00 3.85
345 346 1.531149 CTTTGATCAGTGCCGTTCGTT 59.469 47.619 0.00 0.00 0.00 3.85
346 347 2.442212 TTGATCAGTGCCGTTCGTTA 57.558 45.000 0.00 0.00 0.00 3.18
347 348 2.665649 TGATCAGTGCCGTTCGTTAT 57.334 45.000 0.00 0.00 0.00 1.89
348 349 3.786516 TGATCAGTGCCGTTCGTTATA 57.213 42.857 0.00 0.00 0.00 0.98
349 350 4.316205 TGATCAGTGCCGTTCGTTATAT 57.684 40.909 0.00 0.00 0.00 0.86
350 351 5.441709 TGATCAGTGCCGTTCGTTATATA 57.558 39.130 0.00 0.00 0.00 0.86
351 352 6.020971 TGATCAGTGCCGTTCGTTATATAT 57.979 37.500 0.00 0.00 0.00 0.86
352 353 6.090783 TGATCAGTGCCGTTCGTTATATATC 58.909 40.000 0.00 0.00 0.00 1.63
353 354 5.700722 TCAGTGCCGTTCGTTATATATCT 57.299 39.130 0.00 0.00 0.00 1.98
354 355 5.458015 TCAGTGCCGTTCGTTATATATCTG 58.542 41.667 0.00 0.00 0.00 2.90
355 356 5.239963 TCAGTGCCGTTCGTTATATATCTGA 59.760 40.000 0.00 0.00 0.00 3.27
356 357 6.072119 TCAGTGCCGTTCGTTATATATCTGAT 60.072 38.462 0.00 0.00 0.00 2.90
357 358 6.033937 CAGTGCCGTTCGTTATATATCTGATG 59.966 42.308 0.00 0.00 0.00 3.07
358 359 5.288712 GTGCCGTTCGTTATATATCTGATGG 59.711 44.000 0.00 0.00 0.00 3.51
359 360 5.184287 TGCCGTTCGTTATATATCTGATGGA 59.816 40.000 0.00 0.00 0.00 3.41
360 361 5.515626 GCCGTTCGTTATATATCTGATGGAC 59.484 44.000 0.00 0.00 0.00 4.02
361 362 6.034591 CCGTTCGTTATATATCTGATGGACC 58.965 44.000 0.00 0.00 0.00 4.46
362 363 6.349860 CCGTTCGTTATATATCTGATGGACCA 60.350 42.308 0.00 0.00 0.00 4.02
363 364 6.527023 CGTTCGTTATATATCTGATGGACCAC 59.473 42.308 0.00 0.00 0.00 4.16
364 365 6.190954 TCGTTATATATCTGATGGACCACG 57.809 41.667 0.00 4.13 0.00 4.94
365 366 5.708697 TCGTTATATATCTGATGGACCACGT 59.291 40.000 0.00 0.00 0.00 4.49
366 367 5.800438 CGTTATATATCTGATGGACCACGTG 59.200 44.000 9.08 9.08 0.00 4.49
367 368 6.349033 CGTTATATATCTGATGGACCACGTGA 60.349 42.308 19.30 0.00 0.00 4.35
368 369 5.651387 ATATATCTGATGGACCACGTGAG 57.349 43.478 19.30 9.89 0.00 3.51
369 370 1.852633 ATCTGATGGACCACGTGAGA 58.147 50.000 19.30 10.32 32.78 3.27
370 371 1.627864 TCTGATGGACCACGTGAGAA 58.372 50.000 19.30 0.00 0.00 2.87
371 372 2.179427 TCTGATGGACCACGTGAGAAT 58.821 47.619 19.30 4.87 0.00 2.40
372 373 2.567169 TCTGATGGACCACGTGAGAATT 59.433 45.455 19.30 0.00 0.00 2.17
373 374 3.007940 TCTGATGGACCACGTGAGAATTT 59.992 43.478 19.30 0.00 0.00 1.82
374 375 3.750371 TGATGGACCACGTGAGAATTTT 58.250 40.909 19.30 0.00 0.00 1.82
375 376 4.141287 TGATGGACCACGTGAGAATTTTT 58.859 39.130 19.30 0.00 0.00 1.94
376 377 5.309638 TGATGGACCACGTGAGAATTTTTA 58.690 37.500 19.30 0.00 0.00 1.52
377 378 5.411361 TGATGGACCACGTGAGAATTTTTAG 59.589 40.000 19.30 0.00 0.00 1.85
378 379 4.963373 TGGACCACGTGAGAATTTTTAGA 58.037 39.130 19.30 0.00 0.00 2.10
379 380 5.556915 TGGACCACGTGAGAATTTTTAGAT 58.443 37.500 19.30 0.00 0.00 1.98
380 381 6.001460 TGGACCACGTGAGAATTTTTAGATT 58.999 36.000 19.30 0.00 0.00 2.40
381 382 6.488683 TGGACCACGTGAGAATTTTTAGATTT 59.511 34.615 19.30 0.00 0.00 2.17
382 383 7.013846 TGGACCACGTGAGAATTTTTAGATTTT 59.986 33.333 19.30 0.00 0.00 1.82
383 384 7.537649 GGACCACGTGAGAATTTTTAGATTTTC 59.462 37.037 19.30 0.00 0.00 2.29
384 385 7.936584 ACCACGTGAGAATTTTTAGATTTTCA 58.063 30.769 19.30 0.00 30.42 2.69
385 386 7.860872 ACCACGTGAGAATTTTTAGATTTTCAC 59.139 33.333 19.30 9.81 42.84 3.18
386 387 8.076178 CCACGTGAGAATTTTTAGATTTTCACT 58.924 33.333 19.30 4.66 43.51 3.41
387 388 8.895845 CACGTGAGAATTTTTAGATTTTCACTG 58.104 33.333 10.90 11.94 43.51 3.66
388 389 8.836413 ACGTGAGAATTTTTAGATTTTCACTGA 58.164 29.630 14.98 0.00 43.51 3.41
389 390 9.322776 CGTGAGAATTTTTAGATTTTCACTGAG 57.677 33.333 14.98 2.18 43.51 3.35
390 391 9.617975 GTGAGAATTTTTAGATTTTCACTGAGG 57.382 33.333 11.67 0.00 42.91 3.86
391 392 9.573166 TGAGAATTTTTAGATTTTCACTGAGGA 57.427 29.630 0.00 0.00 28.60 3.71
392 393 9.833182 GAGAATTTTTAGATTTTCACTGAGGAC 57.167 33.333 0.00 0.00 0.00 3.85
393 394 8.797438 AGAATTTTTAGATTTTCACTGAGGACC 58.203 33.333 0.00 0.00 0.00 4.46
394 395 8.712228 AATTTTTAGATTTTCACTGAGGACCT 57.288 30.769 0.00 0.00 0.00 3.85
395 396 8.712228 ATTTTTAGATTTTCACTGAGGACCTT 57.288 30.769 0.00 0.00 0.00 3.50
396 397 8.533569 TTTTTAGATTTTCACTGAGGACCTTT 57.466 30.769 0.00 0.00 0.00 3.11
397 398 8.533569 TTTTAGATTTTCACTGAGGACCTTTT 57.466 30.769 0.00 0.00 0.00 2.27
398 399 8.533569 TTTAGATTTTCACTGAGGACCTTTTT 57.466 30.769 0.00 0.00 0.00 1.94
419 420 4.811969 TTCACCTGATACTTCGCCTAAA 57.188 40.909 0.00 0.00 0.00 1.85
424 425 5.642063 CACCTGATACTTCGCCTAAAAAGAA 59.358 40.000 0.00 0.00 0.00 2.52
437 438 6.523201 CGCCTAAAAAGAATAACACATCACAC 59.477 38.462 0.00 0.00 0.00 3.82
446 447 6.818142 AGAATAACACATCACACATGATCGAA 59.182 34.615 0.00 0.00 44.13 3.71
457 458 6.823182 TCACACATGATCGAAAAATCCATACT 59.177 34.615 0.00 0.00 0.00 2.12
561 567 3.322211 AACCGTTGGATCATTGTACGA 57.678 42.857 0.00 0.00 34.36 3.43
566 572 5.163794 ACCGTTGGATCATTGTACGAATTTC 60.164 40.000 0.00 0.00 34.36 2.17
585 591 1.549620 TCGGGTTTGGTAGCGATTGTA 59.450 47.619 0.00 0.00 0.00 2.41
747 931 1.281867 CCAATAGGCAGTGGACAAGGA 59.718 52.381 0.00 0.00 42.74 3.36
845 1031 4.564110 GGCTATTTCGGCCCGCCT 62.564 66.667 0.00 0.00 43.49 5.52
916 1106 3.711348 CTCAAGGAGCCGAATCGC 58.289 61.111 0.00 0.00 0.00 4.58
964 1526 0.535335 CCCGAACGAAATCCTCCAGA 59.465 55.000 0.00 0.00 0.00 3.86
1411 2015 7.653311 GGCTTGTCTGATTGATTTAGTTGTTTT 59.347 33.333 0.00 0.00 0.00 2.43
1437 2294 6.907853 TTGATGTATCTGACTATCTGAGGG 57.092 41.667 0.00 0.00 0.00 4.30
1480 2344 5.220873 GCTTGCTGCTAAACCCTAATTAGTC 60.221 44.000 11.50 0.00 38.95 2.59
1521 2391 2.973082 GGGCACACCTCAATTGGC 59.027 61.111 5.42 0.00 35.85 4.52
1534 2404 1.812686 AATTGGCACCACAGCTGCAG 61.813 55.000 15.27 10.11 36.27 4.41
1635 2546 1.305219 TTTTCTCCCCAATCGCTGCG 61.305 55.000 17.25 17.25 0.00 5.18
1650 2564 1.828832 CTGCGCACTAGTACAGTAGC 58.171 55.000 5.66 6.84 39.32 3.58
1654 2568 3.187700 GCGCACTAGTACAGTAGCAATT 58.812 45.455 0.30 0.00 38.94 2.32
1655 2569 4.142337 TGCGCACTAGTACAGTAGCAATTA 60.142 41.667 5.66 3.93 43.07 1.40
1656 2570 4.206609 GCGCACTAGTACAGTAGCAATTAC 59.793 45.833 0.30 0.00 38.94 1.89
1657 2571 5.579718 CGCACTAGTACAGTAGCAATTACT 58.420 41.667 0.00 0.00 43.46 2.24
1658 2572 6.034591 CGCACTAGTACAGTAGCAATTACTT 58.965 40.000 0.00 0.00 40.68 2.24
1659 2573 6.530534 CGCACTAGTACAGTAGCAATTACTTT 59.469 38.462 0.00 0.00 40.68 2.66
1660 2574 7.699391 CGCACTAGTACAGTAGCAATTACTTTA 59.301 37.037 0.00 0.00 40.68 1.85
1661 2575 8.805688 GCACTAGTACAGTAGCAATTACTTTAC 58.194 37.037 0.00 3.59 42.19 2.01
1665 2579 8.130671 AGTACAGTAGCAATTACTTTACTGGA 57.869 34.615 11.57 2.46 46.56 3.86
1666 2580 8.251721 AGTACAGTAGCAATTACTTTACTGGAG 58.748 37.037 11.57 0.00 46.56 3.86
1704 2619 4.202556 TGTTGGATTCTTTGGTGATCCTCA 60.203 41.667 3.57 1.16 32.83 3.86
1717 2632 5.172205 GGTGATCCTCAGTTTAGTTGAGAC 58.828 45.833 3.94 0.00 43.75 3.36
1767 2682 8.697846 TGACTAGTAAATGTCAAGTAATTCCG 57.302 34.615 0.00 0.00 39.82 4.30
1835 2761 0.393808 TGATAGGCCCCTTTTCGTGC 60.394 55.000 0.00 0.00 0.00 5.34
1872 2798 0.804989 AAGTCCGCTTTATGTGCTGC 59.195 50.000 0.00 0.00 0.00 5.25
1913 2839 1.227645 TGCCGAGTGGAGCATATGC 60.228 57.895 20.36 20.36 37.49 3.14
2056 2983 3.409026 ACAAAGATCGACAAGAGGCTT 57.591 42.857 0.00 0.00 0.00 4.35
2236 3164 0.179034 CAAGATGGCTCCAGGGTAGC 60.179 60.000 0.00 0.00 39.33 3.58
2237 3165 0.327000 AAGATGGCTCCAGGGTAGCT 60.327 55.000 0.30 0.00 39.97 3.32
2239 3167 1.062121 AGATGGCTCCAGGGTAGCTTA 60.062 52.381 0.00 0.00 39.97 3.09
2240 3168 1.981495 GATGGCTCCAGGGTAGCTTAT 59.019 52.381 0.00 0.00 39.97 1.73
2241 3169 1.893315 TGGCTCCAGGGTAGCTTATT 58.107 50.000 0.00 0.00 39.97 1.40
2242 3170 1.490490 TGGCTCCAGGGTAGCTTATTG 59.510 52.381 0.00 0.00 39.97 1.90
2281 3209 3.206150 CCCTGTGTGCATATGTCTTACC 58.794 50.000 4.29 0.00 0.00 2.85
2426 3354 8.151596 TGAGTTATGGTGTGTTTATAACAGTGA 58.848 33.333 0.00 0.00 43.10 3.41
2429 3357 5.682943 TGGTGTGTTTATAACAGTGAAGC 57.317 39.130 0.00 0.00 43.10 3.86
2472 3400 9.599322 CACAACTTTCATACAGTTAGAAACATC 57.401 33.333 0.00 0.00 32.48 3.06
2524 3452 3.139850 CGGATCGACTACCTGATGTACT 58.860 50.000 0.00 0.00 0.00 2.73
2566 3505 7.239763 TCACTGAATATGTACTCTGGACAAA 57.760 36.000 0.00 0.00 0.00 2.83
2769 3710 7.433680 ACTGTGATCCAAACCTTTTTCAATAC 58.566 34.615 0.00 0.00 0.00 1.89
2798 3739 0.179020 TGGTAGCACCAGGCATATGC 60.179 55.000 19.79 19.79 44.79 3.14
2812 3753 6.209589 CCAGGCATATGCTACTTACTCTCTAA 59.790 42.308 26.12 0.00 41.70 2.10
2831 3779 9.575783 CTCTCTAAATACTAAGGTTTCACTGTC 57.424 37.037 0.00 0.00 0.00 3.51
2838 3786 5.193679 ACTAAGGTTTCACTGTCAAGCTTT 58.806 37.500 15.18 0.93 40.37 3.51
2844 3792 7.820648 AGGTTTCACTGTCAAGCTTTTATATG 58.179 34.615 0.00 0.00 0.00 1.78
2898 3846 0.251354 TCAGCATGCCTCAACTCTCC 59.749 55.000 15.66 0.00 34.76 3.71
2908 3856 4.409901 TGCCTCAACTCTCCATCAATCATA 59.590 41.667 0.00 0.00 0.00 2.15
2909 3857 4.754114 GCCTCAACTCTCCATCAATCATAC 59.246 45.833 0.00 0.00 0.00 2.39
2910 3858 5.454471 GCCTCAACTCTCCATCAATCATACT 60.454 44.000 0.00 0.00 0.00 2.12
2911 3859 6.222389 CCTCAACTCTCCATCAATCATACTC 58.778 44.000 0.00 0.00 0.00 2.59
2912 3860 6.166984 TCAACTCTCCATCAATCATACTCC 57.833 41.667 0.00 0.00 0.00 3.85
2913 3861 5.070981 TCAACTCTCCATCAATCATACTCCC 59.929 44.000 0.00 0.00 0.00 4.30
2914 3862 4.825445 ACTCTCCATCAATCATACTCCCT 58.175 43.478 0.00 0.00 0.00 4.20
2915 3863 4.837860 ACTCTCCATCAATCATACTCCCTC 59.162 45.833 0.00 0.00 0.00 4.30
2916 3864 4.163427 TCTCCATCAATCATACTCCCTCC 58.837 47.826 0.00 0.00 0.00 4.30
2917 3865 2.899900 TCCATCAATCATACTCCCTCCG 59.100 50.000 0.00 0.00 0.00 4.63
2918 3866 2.634940 CCATCAATCATACTCCCTCCGT 59.365 50.000 0.00 0.00 0.00 4.69
2919 3867 3.306364 CCATCAATCATACTCCCTCCGTC 60.306 52.174 0.00 0.00 0.00 4.79
2920 3868 2.317040 TCAATCATACTCCCTCCGTCC 58.683 52.381 0.00 0.00 0.00 4.79
2921 3869 1.000163 CAATCATACTCCCTCCGTCCG 60.000 57.143 0.00 0.00 0.00 4.79
2922 3870 0.539901 ATCATACTCCCTCCGTCCGG 60.540 60.000 0.00 0.00 0.00 5.14
2923 3871 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
2924 3872 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
2925 3873 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
2926 3874 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2927 3875 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2928 3876 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2929 3877 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2930 3878 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2931 3879 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2932 3880 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2933 3881 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2934 3882 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2935 3883 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2936 3884 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2937 3885 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2938 3886 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2939 3887 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2940 3888 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2941 3889 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2942 3890 7.201574 CGTCCGGAAATACTTGTCATCAAAATA 60.202 37.037 5.23 0.00 32.87 1.40
2943 3891 8.122952 GTCCGGAAATACTTGTCATCAAAATAG 58.877 37.037 5.23 0.00 32.87 1.73
2944 3892 8.044309 TCCGGAAATACTTGTCATCAAAATAGA 58.956 33.333 0.00 0.00 32.87 1.98
2945 3893 8.840321 CCGGAAATACTTGTCATCAAAATAGAT 58.160 33.333 0.00 0.00 32.87 1.98
2946 3894 9.655769 CGGAAATACTTGTCATCAAAATAGATG 57.344 33.333 0.00 0.00 45.28 2.90
2998 3946 8.211030 ACATCTAGATACATCCATTCCAATGA 57.789 34.615 4.54 0.00 38.70 2.57
2999 3947 8.099537 ACATCTAGATACATCCATTCCAATGAC 58.900 37.037 4.54 0.00 38.70 3.06
3000 3948 7.616528 TCTAGATACATCCATTCCAATGACA 57.383 36.000 0.56 0.00 38.70 3.58
3001 3949 8.033178 TCTAGATACATCCATTCCAATGACAA 57.967 34.615 0.56 0.00 38.70 3.18
3002 3950 8.152898 TCTAGATACATCCATTCCAATGACAAG 58.847 37.037 0.56 0.00 38.70 3.16
3003 3951 6.666678 AGATACATCCATTCCAATGACAAGT 58.333 36.000 0.56 0.00 38.70 3.16
3004 3952 7.805163 AGATACATCCATTCCAATGACAAGTA 58.195 34.615 0.56 0.18 38.70 2.24
3005 3953 8.443176 AGATACATCCATTCCAATGACAAGTAT 58.557 33.333 0.56 4.32 38.70 2.12
3006 3954 9.071276 GATACATCCATTCCAATGACAAGTATT 57.929 33.333 0.56 0.00 38.70 1.89
3007 3955 7.722949 ACATCCATTCCAATGACAAGTATTT 57.277 32.000 0.56 0.00 38.70 1.40
3008 3956 7.775120 ACATCCATTCCAATGACAAGTATTTC 58.225 34.615 0.56 0.00 38.70 2.17
3009 3957 6.773976 TCCATTCCAATGACAAGTATTTCC 57.226 37.500 0.56 0.00 38.70 3.13
3010 3958 5.356751 TCCATTCCAATGACAAGTATTTCCG 59.643 40.000 0.56 0.00 38.70 4.30
3011 3959 5.450412 CCATTCCAATGACAAGTATTTCCGG 60.450 44.000 0.00 0.00 38.70 5.14
3012 3960 4.561500 TCCAATGACAAGTATTTCCGGA 57.438 40.909 0.00 0.00 0.00 5.14
3013 3961 5.110814 TCCAATGACAAGTATTTCCGGAT 57.889 39.130 4.15 0.00 0.00 4.18
3014 3962 4.881273 TCCAATGACAAGTATTTCCGGATG 59.119 41.667 4.15 0.97 0.00 3.51
3015 3963 4.036734 CCAATGACAAGTATTTCCGGATGG 59.963 45.833 4.15 0.32 0.00 3.51
3016 3964 4.771114 ATGACAAGTATTTCCGGATGGA 57.229 40.909 4.15 0.00 44.61 3.41
3029 3977 1.542030 CGGATGGAGGGAGTAGAATCG 59.458 57.143 0.00 0.00 0.00 3.34
3092 4066 7.630082 AGGATGTGAGTGCCTATTTACTTTTA 58.370 34.615 0.00 0.00 0.00 1.52
3180 4155 5.183904 CAGCTTGTTTTCTATTACCCTGCTT 59.816 40.000 0.00 0.00 0.00 3.91
3237 4212 2.749621 GTTGAATACCCTGCTCCAACTG 59.250 50.000 0.00 0.00 33.28 3.16
3246 4221 2.485426 CCTGCTCCAACTGTACACATTG 59.515 50.000 7.78 7.78 0.00 2.82
3252 4227 2.229792 CAACTGTACACATTGCTGGGT 58.770 47.619 0.00 0.00 43.08 4.51
3266 4241 0.518636 CTGGGTCATGCACAAACGAG 59.481 55.000 0.00 0.00 0.00 4.18
3275 4250 6.128391 GGTCATGCACAAACGAGATAGTTTTA 60.128 38.462 0.00 0.00 41.84 1.52
3276 4251 7.414098 GGTCATGCACAAACGAGATAGTTTTAT 60.414 37.037 0.00 0.00 41.84 1.40
3320 4295 5.646360 TCCAAAGGAACTCCATAATCGAAAC 59.354 40.000 0.00 0.00 38.49 2.78
3350 4325 7.039293 TGCTAAAGTTCCTGTTACATCTGAGTA 60.039 37.037 0.00 0.00 0.00 2.59
3380 4355 7.615582 TGAAATAATTAAGAGTGAGTGCTGG 57.384 36.000 0.00 0.00 0.00 4.85
3497 4480 2.594303 TGCTCCAACTTGGCACCG 60.594 61.111 2.52 0.00 37.47 4.94
3533 4516 7.308348 GCATAAAGGCAAAAGTGTAGTAGTTCA 60.308 37.037 0.00 0.00 0.00 3.18
3534 4517 6.373186 AAAGGCAAAAGTGTAGTAGTTCAC 57.627 37.500 0.00 0.00 35.13 3.18
3535 4518 4.056050 AGGCAAAAGTGTAGTAGTTCACG 58.944 43.478 2.09 0.00 39.25 4.35
3537 4520 3.246699 GCAAAAGTGTAGTAGTTCACGCA 59.753 43.478 2.09 0.00 39.25 5.24
3550 4543 7.960793 AGTAGTTCACGCACATTTATTTAGTC 58.039 34.615 0.00 0.00 0.00 2.59
3554 4547 6.656314 TCACGCACATTTATTTAGTCGAAT 57.344 33.333 0.00 0.00 0.00 3.34
3557 4550 7.490079 TCACGCACATTTATTTAGTCGAATACT 59.510 33.333 0.00 0.00 42.62 2.12
3560 4553 7.998767 CGCACATTTATTTAGTCGAATACTCTG 59.001 37.037 0.00 0.00 39.80 3.35
3570 4563 4.705507 AGTCGAATACTCTGCTCCAACTAA 59.294 41.667 0.00 0.00 30.33 2.24
3571 4564 5.038033 GTCGAATACTCTGCTCCAACTAAG 58.962 45.833 0.00 0.00 0.00 2.18
3577 4570 3.244700 ACTCTGCTCCAACTAAGTGCATT 60.245 43.478 0.00 0.00 33.67 3.56
3583 4576 4.579869 CTCCAACTAAGTGCATTACTGGT 58.420 43.478 0.00 0.00 40.26 4.00
3585 4578 6.116711 TCCAACTAAGTGCATTACTGGTAA 57.883 37.500 0.00 0.00 40.26 2.85
3593 4586 4.700268 TGCATTACTGGTAAATGCACAG 57.300 40.909 17.00 0.00 42.46 3.66
3595 4588 4.949238 TGCATTACTGGTAAATGCACAGAT 59.051 37.500 17.00 0.00 42.46 2.90
3606 4599 7.176515 TGGTAAATGCACAGATGACATAGTTTT 59.823 33.333 0.00 0.00 0.00 2.43
3610 4603 3.191162 GCACAGATGACATAGTTTTGCCA 59.809 43.478 0.00 0.00 0.00 4.92
3626 4619 5.855740 TTTGCCATGATTCTGCATATTCA 57.144 34.783 0.00 0.00 34.51 2.57
3627 4620 5.855740 TTGCCATGATTCTGCATATTCAA 57.144 34.783 0.00 0.00 34.51 2.69
3637 4630 8.242739 TGATTCTGCATATTCAACGAATTTTGA 58.757 29.630 0.00 0.00 33.95 2.69
3638 4631 8.984891 ATTCTGCATATTCAACGAATTTTGAA 57.015 26.923 7.56 7.56 46.78 2.69
3675 4668 1.374758 CTGTCACGCCTCAGTTCCC 60.375 63.158 0.00 0.00 0.00 3.97
3682 4675 1.073923 ACGCCTCAGTTCCCTTGAATT 59.926 47.619 0.00 0.00 31.98 2.17
3687 4680 5.654497 GCCTCAGTTCCCTTGAATTAATTG 58.346 41.667 5.17 0.00 31.98 2.32
3707 4700 1.633561 CGAGTGAGTGGTGCACATAG 58.366 55.000 20.43 0.00 38.70 2.23
3726 4719 2.607750 TGGTCCTGGTCTCTGCCC 60.608 66.667 0.00 0.00 0.00 5.36
3731 4724 1.194781 TCCTGGTCTCTGCCCTGAAC 61.195 60.000 0.00 0.00 0.00 3.18
3734 4727 1.194781 TGGTCTCTGCCCTGAACCTC 61.195 60.000 0.00 0.00 0.00 3.85
3759 4752 0.518636 CCATTCTGACACCAACGCTG 59.481 55.000 0.00 0.00 0.00 5.18
3792 4791 7.965107 CAGTGCTATCATCTTTTAAACCTGAAC 59.035 37.037 0.00 0.00 0.00 3.18
3799 4798 7.806690 TCATCTTTTAAACCTGAACGATGAAG 58.193 34.615 0.00 0.00 34.74 3.02
3816 4815 1.394266 AAGCCTGCCAACCTTGTGTG 61.394 55.000 0.00 0.00 0.00 3.82
3990 4989 2.266055 CACGCCTCCAAGACCTCC 59.734 66.667 0.00 0.00 0.00 4.30
3997 4996 4.796231 CCAAGACCTCCGACGCCG 62.796 72.222 0.00 0.00 0.00 6.46
4048 5065 2.855770 ATCAACAAGGGCCAGGGCA 61.856 57.895 16.36 0.00 44.11 5.36
4049 5066 2.793317 ATCAACAAGGGCCAGGGCAG 62.793 60.000 16.36 6.57 44.11 4.85
4071 5088 2.548295 GGCCCTTTCGAACAACGCA 61.548 57.895 0.00 0.00 42.26 5.24
4077 5094 1.827315 TTTCGAACAACGCAGCCTCG 61.827 55.000 0.00 0.00 42.26 4.63
4174 5192 2.198406 GCGGGTTTTGAAGGAAACAAC 58.802 47.619 3.32 0.00 40.44 3.32
4181 5199 4.561735 TTTGAAGGAAACAACCGATGAC 57.438 40.909 0.00 0.00 34.73 3.06
4193 5211 1.811266 CGATGACGTGCCTGGGAAG 60.811 63.158 0.00 0.00 34.56 3.46
4194 5212 1.450312 GATGACGTGCCTGGGAAGG 60.450 63.158 6.08 0.00 0.00 3.46
4195 5213 1.899437 GATGACGTGCCTGGGAAGGA 61.899 60.000 6.08 0.00 0.00 3.36
4196 5214 1.903877 ATGACGTGCCTGGGAAGGAG 61.904 60.000 6.08 0.00 0.00 3.69
4197 5215 2.203788 ACGTGCCTGGGAAGGAGA 60.204 61.111 6.08 0.00 0.00 3.71
4209 5227 1.474143 GGAAGGAGATCGAGGGCAAAG 60.474 57.143 0.00 0.00 0.00 2.77
4268 5286 0.109226 GTCGACCAGCCAGTCACTAC 60.109 60.000 3.51 0.00 36.52 2.73
4270 5288 1.003928 TCGACCAGCCAGTCACTACTA 59.996 52.381 4.75 0.00 36.52 1.82
4275 5293 4.097418 ACCAGCCAGTCACTACTAATCTT 58.903 43.478 0.00 0.00 33.48 2.40
4280 5298 4.095036 GCCAGTCACTACTAATCTTTTGCC 59.905 45.833 0.00 0.00 33.48 4.52
4283 5301 6.375455 CCAGTCACTACTAATCTTTTGCCAAT 59.625 38.462 0.00 0.00 33.48 3.16
4284 5302 7.552687 CCAGTCACTACTAATCTTTTGCCAATA 59.447 37.037 0.00 0.00 33.48 1.90
4302 5320 4.252878 CAATAAAAAGAAATGCCGGCCTT 58.747 39.130 26.77 18.94 0.00 4.35
4316 5334 2.119029 GCCTTAATCCGGTGGTGGC 61.119 63.158 0.00 6.92 0.00 5.01
4377 5396 3.294214 TGATAAGTACTTCCTCCGTCCC 58.706 50.000 12.39 0.00 0.00 4.46
4383 5402 0.981943 ACTTCCTCCGTCCCGAAATT 59.018 50.000 0.00 0.00 0.00 1.82
4389 5408 2.093869 CCTCCGTCCCGAAATTCTTGTA 60.094 50.000 0.00 0.00 0.00 2.41
4390 5409 3.431766 CCTCCGTCCCGAAATTCTTGTAT 60.432 47.826 0.00 0.00 0.00 2.29
4392 5411 5.341872 TCCGTCCCGAAATTCTTGTATTA 57.658 39.130 0.00 0.00 0.00 0.98
4393 5412 5.353938 TCCGTCCCGAAATTCTTGTATTAG 58.646 41.667 0.00 0.00 0.00 1.73
4395 5414 5.989777 CCGTCCCGAAATTCTTGTATTAGAT 59.010 40.000 0.00 0.00 0.00 1.98
4396 5415 6.482308 CCGTCCCGAAATTCTTGTATTAGATT 59.518 38.462 0.00 0.00 0.00 2.40
4397 5416 7.307219 CCGTCCCGAAATTCTTGTATTAGATTC 60.307 40.741 0.00 0.00 0.00 2.52
4399 5418 7.224167 GTCCCGAAATTCTTGTATTAGATTCGT 59.776 37.037 0.00 0.00 36.02 3.85
4400 5419 7.437267 TCCCGAAATTCTTGTATTAGATTCGTC 59.563 37.037 0.00 0.00 36.02 4.20
4431 5450 6.443876 GGATGTACCTAATACTAAAACGCG 57.556 41.667 3.53 3.53 34.56 6.01
4432 5451 6.208644 GGATGTACCTAATACTAAAACGCGA 58.791 40.000 15.93 0.00 34.56 5.87
4435 5454 6.620678 TGTACCTAATACTAAAACGCGACTT 58.379 36.000 15.93 8.00 34.56 3.01
4443 5462 5.697848 ACTAAAACGCGACTTGATACATC 57.302 39.130 15.93 0.00 0.00 3.06
4444 5463 4.565564 ACTAAAACGCGACTTGATACATCC 59.434 41.667 15.93 0.00 0.00 3.51
4446 5465 2.209838 ACGCGACTTGATACATCCTG 57.790 50.000 15.93 0.00 0.00 3.86
4448 5467 2.686405 ACGCGACTTGATACATCCTGTA 59.314 45.455 15.93 0.00 37.24 2.74
4449 5468 3.243101 ACGCGACTTGATACATCCTGTAG 60.243 47.826 15.93 0.00 36.14 2.74
4450 5469 3.643763 GCGACTTGATACATCCTGTAGG 58.356 50.000 0.00 0.00 36.14 3.18
4451 5470 3.068307 GCGACTTGATACATCCTGTAGGT 59.932 47.826 0.00 0.00 36.14 3.08
4452 5471 4.611943 CGACTTGATACATCCTGTAGGTG 58.388 47.826 0.00 0.00 36.14 4.00
4453 5472 4.098044 CGACTTGATACATCCTGTAGGTGT 59.902 45.833 9.82 9.82 36.14 4.16
4454 5473 5.298527 CGACTTGATACATCCTGTAGGTGTA 59.701 44.000 12.49 12.49 36.14 2.90
4455 5474 6.513556 CGACTTGATACATCCTGTAGGTGTAG 60.514 46.154 14.30 8.36 36.14 2.74
4456 5475 5.598830 ACTTGATACATCCTGTAGGTGTAGG 59.401 44.000 14.30 0.00 36.14 3.18
4459 5478 5.597182 TGATACATCCTGTAGGTGTAGGTTC 59.403 44.000 14.30 10.04 36.14 3.62
4460 5479 3.786553 ACATCCTGTAGGTGTAGGTTCA 58.213 45.455 0.00 0.00 35.54 3.18
4461 5480 3.769844 ACATCCTGTAGGTGTAGGTTCAG 59.230 47.826 0.00 0.00 35.54 3.02
4465 5484 3.576982 CCTGTAGGTGTAGGTTCAGTGAA 59.423 47.826 0.08 0.08 0.00 3.18
4466 5485 4.557205 CTGTAGGTGTAGGTTCAGTGAAC 58.443 47.826 25.00 25.00 41.32 3.18
4475 5792 1.144276 TTCAGTGAACCGAACGGCA 59.856 52.632 13.32 1.39 39.32 5.69
4476 5793 0.250124 TTCAGTGAACCGAACGGCAT 60.250 50.000 13.32 2.48 39.32 4.40
4477 5794 0.250124 TCAGTGAACCGAACGGCATT 60.250 50.000 13.32 0.93 39.32 3.56
4504 5821 3.926616 ACCTTACAGATGTTCGAGTTGG 58.073 45.455 0.00 0.00 0.00 3.77
4505 5822 2.673368 CCTTACAGATGTTCGAGTTGGC 59.327 50.000 0.00 0.00 0.00 4.52
4506 5823 3.325870 CTTACAGATGTTCGAGTTGGCA 58.674 45.455 0.00 0.00 0.00 4.92
4507 5824 1.800805 ACAGATGTTCGAGTTGGCAG 58.199 50.000 0.00 0.00 0.00 4.85
4511 5828 1.266718 GATGTTCGAGTTGGCAGCAAA 59.733 47.619 3.63 0.00 0.00 3.68
4518 5835 1.678101 GAGTTGGCAGCAAAGTTGACT 59.322 47.619 3.63 0.00 0.00 3.41
4531 5848 1.993370 AGTTGACTGAATTCGTAGCGC 59.007 47.619 0.00 0.00 0.00 5.92
4548 5867 4.856607 CGCTCCGCCTCTCGTTCC 62.857 72.222 0.00 0.00 36.19 3.62
4588 5946 3.512516 GGCACTGGCGATCAAGGC 61.513 66.667 0.00 0.00 42.47 4.35
4601 5975 3.303135 AAGGCCGCAGTCAGTCGA 61.303 61.111 0.00 0.00 0.00 4.20
4611 5985 0.828022 AGTCAGTCGACACAACCCAA 59.172 50.000 19.50 0.00 45.23 4.12
4612 5986 1.416401 AGTCAGTCGACACAACCCAAT 59.584 47.619 19.50 0.00 45.23 3.16
4778 6162 0.034337 CGAATATACCCACCACCCCG 59.966 60.000 0.00 0.00 0.00 5.73
4789 6180 3.407967 CACCCCGCCACTACCCAT 61.408 66.667 0.00 0.00 0.00 4.00
4849 6247 2.032071 CCCCGGGCGAATATCCAC 59.968 66.667 17.73 0.00 0.00 4.02
4850 6248 2.516888 CCCCGGGCGAATATCCACT 61.517 63.158 17.73 0.00 0.00 4.00
4853 6251 1.745890 CGGGCGAATATCCACTCCA 59.254 57.895 0.00 0.00 0.00 3.86
4854 6252 0.105964 CGGGCGAATATCCACTCCAA 59.894 55.000 0.00 0.00 0.00 3.53
5051 6474 4.856607 CTCCTCGCCGTTCCGCTC 62.857 72.222 0.00 0.00 0.00 5.03
5053 6476 4.856607 CCTCGCCGTTCCGCTCTC 62.857 72.222 0.00 0.00 0.00 3.20
5054 6477 3.816524 CTCGCCGTTCCGCTCTCT 61.817 66.667 0.00 0.00 0.00 3.10
5055 6478 3.743091 CTCGCCGTTCCGCTCTCTC 62.743 68.421 0.00 0.00 0.00 3.20
5056 6479 3.816524 CGCCGTTCCGCTCTCTCT 61.817 66.667 0.00 0.00 0.00 3.10
5062 6485 1.742411 CGTTCCGCTCTCTCTCTCTCT 60.742 57.143 0.00 0.00 0.00 3.10
5068 6491 0.940126 CTCTCTCTCTCTCTGCTCGC 59.060 60.000 0.00 0.00 0.00 5.03
5071 6494 2.441164 TCTCTCTCTGCTCGCCCC 60.441 66.667 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.326264 GTGACAGGTCTCCATTGGCT 59.674 55.000 0.00 0.00 0.00 4.75
1 2 1.021390 CGTGACAGGTCTCCATTGGC 61.021 60.000 0.00 0.00 0.00 4.52
3 4 1.000843 TGTCGTGACAGGTCTCCATTG 59.999 52.381 0.00 0.00 36.21 2.82
5 6 3.051617 TGTCGTGACAGGTCTCCAT 57.948 52.632 0.00 0.00 36.21 3.41
6 7 4.591038 TGTCGTGACAGGTCTCCA 57.409 55.556 0.00 0.00 36.21 3.86
14 15 0.820482 TTCCTCCGTCTGTCGTGACA 60.820 55.000 2.28 2.28 39.32 3.58
15 16 0.313043 TTTCCTCCGTCTGTCGTGAC 59.687 55.000 0.00 0.00 37.94 3.67
16 17 0.596577 CTTTCCTCCGTCTGTCGTGA 59.403 55.000 0.00 0.00 37.94 4.35
17 18 0.388649 CCTTTCCTCCGTCTGTCGTG 60.389 60.000 0.00 0.00 37.94 4.35
18 19 0.826672 ACCTTTCCTCCGTCTGTCGT 60.827 55.000 0.00 0.00 37.94 4.34
19 20 0.109226 GACCTTTCCTCCGTCTGTCG 60.109 60.000 0.00 0.00 39.52 4.35
20 21 0.966920 TGACCTTTCCTCCGTCTGTC 59.033 55.000 0.00 0.00 0.00 3.51
21 22 1.276421 CATGACCTTTCCTCCGTCTGT 59.724 52.381 0.00 0.00 0.00 3.41
22 23 1.406069 CCATGACCTTTCCTCCGTCTG 60.406 57.143 0.00 0.00 0.00 3.51
23 24 0.905357 CCATGACCTTTCCTCCGTCT 59.095 55.000 0.00 0.00 0.00 4.18
24 25 0.744771 GCCATGACCTTTCCTCCGTC 60.745 60.000 0.00 0.00 0.00 4.79
25 26 1.201429 AGCCATGACCTTTCCTCCGT 61.201 55.000 0.00 0.00 0.00 4.69
26 27 0.035056 AAGCCATGACCTTTCCTCCG 60.035 55.000 0.00 0.00 0.00 4.63
27 28 1.004745 TGAAGCCATGACCTTTCCTCC 59.995 52.381 0.00 0.00 0.00 4.30
28 29 2.290577 ACTGAAGCCATGACCTTTCCTC 60.291 50.000 0.00 0.00 0.00 3.71
29 30 1.707427 ACTGAAGCCATGACCTTTCCT 59.293 47.619 0.00 0.00 0.00 3.36
30 31 2.087646 GACTGAAGCCATGACCTTTCC 58.912 52.381 0.00 0.00 0.00 3.13
31 32 1.734465 CGACTGAAGCCATGACCTTTC 59.266 52.381 0.00 0.00 0.00 2.62
32 33 1.813513 CGACTGAAGCCATGACCTTT 58.186 50.000 0.00 0.00 0.00 3.11
33 34 0.674895 GCGACTGAAGCCATGACCTT 60.675 55.000 0.00 0.00 0.00 3.50
34 35 1.078848 GCGACTGAAGCCATGACCT 60.079 57.895 0.00 0.00 0.00 3.85
35 36 3.490890 GCGACTGAAGCCATGACC 58.509 61.111 0.00 0.00 0.00 4.02
52 53 4.227134 CTCATCCTCGGCCGGTGG 62.227 72.222 27.83 26.36 0.00 4.61
53 54 3.019003 AACTCATCCTCGGCCGGTG 62.019 63.158 27.83 18.34 0.00 4.94
54 55 2.683933 AACTCATCCTCGGCCGGT 60.684 61.111 27.83 10.58 0.00 5.28
55 56 1.672854 TACAACTCATCCTCGGCCGG 61.673 60.000 27.83 16.14 0.00 6.13
56 57 0.249073 CTACAACTCATCCTCGGCCG 60.249 60.000 22.12 22.12 0.00 6.13
57 58 0.530870 GCTACAACTCATCCTCGGCC 60.531 60.000 0.00 0.00 0.00 6.13
58 59 0.530870 GGCTACAACTCATCCTCGGC 60.531 60.000 0.00 0.00 0.00 5.54
59 60 0.249073 CGGCTACAACTCATCCTCGG 60.249 60.000 0.00 0.00 0.00 4.63
60 61 0.738975 TCGGCTACAACTCATCCTCG 59.261 55.000 0.00 0.00 0.00 4.63
61 62 2.101582 ACATCGGCTACAACTCATCCTC 59.898 50.000 0.00 0.00 0.00 3.71
62 63 2.111384 ACATCGGCTACAACTCATCCT 58.889 47.619 0.00 0.00 0.00 3.24
63 64 2.604046 ACATCGGCTACAACTCATCC 57.396 50.000 0.00 0.00 0.00 3.51
64 65 3.553096 CCCTACATCGGCTACAACTCATC 60.553 52.174 0.00 0.00 0.00 2.92
65 66 2.365617 CCCTACATCGGCTACAACTCAT 59.634 50.000 0.00 0.00 0.00 2.90
66 67 1.754803 CCCTACATCGGCTACAACTCA 59.245 52.381 0.00 0.00 0.00 3.41
67 68 1.538419 GCCCTACATCGGCTACAACTC 60.538 57.143 0.00 0.00 43.48 3.01
68 69 0.464452 GCCCTACATCGGCTACAACT 59.536 55.000 0.00 0.00 43.48 3.16
69 70 0.532196 GGCCCTACATCGGCTACAAC 60.532 60.000 0.00 0.00 46.24 3.32
70 71 1.692173 GGGCCCTACATCGGCTACAA 61.692 60.000 17.04 0.00 46.24 2.41
71 72 2.138179 GGGCCCTACATCGGCTACA 61.138 63.158 17.04 0.00 46.24 2.74
72 73 2.741747 GGGCCCTACATCGGCTAC 59.258 66.667 17.04 0.00 46.24 3.58
73 74 2.915659 CGGGCCCTACATCGGCTA 60.916 66.667 22.43 0.00 46.24 3.93
75 76 4.603946 GACGGGCCCTACATCGGC 62.604 72.222 22.43 2.91 46.29 5.54
76 77 4.280494 CGACGGGCCCTACATCGG 62.280 72.222 22.43 4.34 0.00 4.18
77 78 4.944372 GCGACGGGCCCTACATCG 62.944 72.222 22.43 22.79 34.80 3.84
78 79 3.537874 AGCGACGGGCCCTACATC 61.538 66.667 22.43 11.07 45.17 3.06
79 80 3.849951 CAGCGACGGGCCCTACAT 61.850 66.667 22.43 1.59 45.17 2.29
93 94 4.821589 CTTCCCTCCGACGGCAGC 62.822 72.222 9.66 0.00 0.00 5.25
94 95 4.148825 CCTTCCCTCCGACGGCAG 62.149 72.222 9.66 7.66 0.00 4.85
95 96 4.689549 TCCTTCCCTCCGACGGCA 62.690 66.667 9.66 0.00 29.74 5.69
96 97 4.144703 GTCCTTCCCTCCGACGGC 62.145 72.222 9.66 0.00 29.74 5.68
97 98 0.754217 TATGTCCTTCCCTCCGACGG 60.754 60.000 7.84 7.84 0.00 4.79
98 99 1.108776 TTATGTCCTTCCCTCCGACG 58.891 55.000 0.00 0.00 0.00 5.12
99 100 2.101082 GAGTTATGTCCTTCCCTCCGAC 59.899 54.545 0.00 0.00 0.00 4.79
100 101 2.385803 GAGTTATGTCCTTCCCTCCGA 58.614 52.381 0.00 0.00 0.00 4.55
101 102 1.067212 CGAGTTATGTCCTTCCCTCCG 59.933 57.143 0.00 0.00 0.00 4.63
102 103 2.362717 CTCGAGTTATGTCCTTCCCTCC 59.637 54.545 3.62 0.00 0.00 4.30
103 104 3.025262 ACTCGAGTTATGTCCTTCCCTC 58.975 50.000 13.58 0.00 0.00 4.30
104 105 3.025262 GACTCGAGTTATGTCCTTCCCT 58.975 50.000 21.08 0.00 0.00 4.20
105 106 2.223525 CGACTCGAGTTATGTCCTTCCC 60.224 54.545 21.08 0.77 0.00 3.97
106 107 2.795331 GCGACTCGAGTTATGTCCTTCC 60.795 54.545 21.08 1.32 0.00 3.46
107 108 2.452105 GCGACTCGAGTTATGTCCTTC 58.548 52.381 21.08 2.11 0.00 3.46
108 109 1.134560 GGCGACTCGAGTTATGTCCTT 59.865 52.381 21.08 0.00 0.00 3.36
109 110 0.739561 GGCGACTCGAGTTATGTCCT 59.260 55.000 21.08 0.00 0.00 3.85
110 111 0.454600 TGGCGACTCGAGTTATGTCC 59.545 55.000 21.08 15.70 0.00 4.02
111 112 1.546834 GTGGCGACTCGAGTTATGTC 58.453 55.000 21.08 14.58 0.00 3.06
112 113 0.172803 GGTGGCGACTCGAGTTATGT 59.827 55.000 21.08 0.00 0.00 2.29
113 114 0.866061 CGGTGGCGACTCGAGTTATG 60.866 60.000 21.08 13.72 0.00 1.90
114 115 1.432251 CGGTGGCGACTCGAGTTAT 59.568 57.895 21.08 0.00 0.00 1.89
115 116 2.693762 CCGGTGGCGACTCGAGTTA 61.694 63.158 21.08 4.11 0.00 2.24
116 117 4.052229 CCGGTGGCGACTCGAGTT 62.052 66.667 21.08 3.07 0.00 3.01
127 128 4.227134 CTCATCCTCCGCCGGTGG 62.227 72.222 28.93 28.93 37.67 4.61
128 129 4.899239 GCTCATCCTCCGCCGGTG 62.899 72.222 8.42 8.42 0.00 4.94
148 149 4.463879 CAGGCCCTCTGTCCGCTG 62.464 72.222 0.00 0.00 38.64 5.18
156 157 4.357279 GGCAGCAACAGGCCCTCT 62.357 66.667 0.00 0.00 46.50 3.69
161 162 3.818787 CCGATGGCAGCAACAGGC 61.819 66.667 2.73 0.00 45.30 4.85
162 163 2.046023 TCCGATGGCAGCAACAGG 60.046 61.111 2.73 0.00 0.00 4.00
163 164 2.110967 CCTCCGATGGCAGCAACAG 61.111 63.158 2.73 0.00 0.00 3.16
164 165 2.046023 CCTCCGATGGCAGCAACA 60.046 61.111 2.73 0.00 0.00 3.33
165 166 2.825836 CCCTCCGATGGCAGCAAC 60.826 66.667 2.73 0.00 0.00 4.17
166 167 4.113815 CCCCTCCGATGGCAGCAA 62.114 66.667 2.73 0.00 0.00 3.91
193 194 3.431725 GCCCTTGCCTTTCGACGG 61.432 66.667 0.00 0.00 0.00 4.79
194 195 2.358737 AGCCCTTGCCTTTCGACG 60.359 61.111 0.00 0.00 38.69 5.12
195 196 1.302511 TGAGCCCTTGCCTTTCGAC 60.303 57.895 0.00 0.00 38.69 4.20
196 197 1.302511 GTGAGCCCTTGCCTTTCGA 60.303 57.895 0.00 0.00 38.69 3.71
197 198 2.680913 CGTGAGCCCTTGCCTTTCG 61.681 63.158 0.00 0.00 38.69 3.46
198 199 2.335712 CCGTGAGCCCTTGCCTTTC 61.336 63.158 0.00 0.00 38.69 2.62
199 200 2.282462 CCGTGAGCCCTTGCCTTT 60.282 61.111 0.00 0.00 38.69 3.11
215 216 3.376914 GAATCACGTTTCGGCGGCC 62.377 63.158 9.54 9.54 35.98 6.13
216 217 2.097728 GAATCACGTTTCGGCGGC 59.902 61.111 7.21 0.00 35.98 6.53
217 218 1.131826 GTGAATCACGTTTCGGCGG 59.868 57.895 7.21 0.00 35.98 6.13
218 219 4.717917 GTGAATCACGTTTCGGCG 57.282 55.556 0.00 0.00 37.94 6.46
227 228 6.816793 CGTTTCAATCTTAACGTGAATCAC 57.183 37.500 2.75 2.75 41.47 3.06
236 237 6.962686 AGGTGGTTTACGTTTCAATCTTAAC 58.037 36.000 0.00 0.00 0.00 2.01
237 238 7.282675 TCAAGGTGGTTTACGTTTCAATCTTAA 59.717 33.333 0.00 0.00 35.34 1.85
238 239 6.766944 TCAAGGTGGTTTACGTTTCAATCTTA 59.233 34.615 0.00 0.00 35.34 2.10
239 240 5.591067 TCAAGGTGGTTTACGTTTCAATCTT 59.409 36.000 0.00 0.00 35.34 2.40
240 241 5.127491 TCAAGGTGGTTTACGTTTCAATCT 58.873 37.500 0.00 0.00 35.34 2.40
241 242 5.427036 TCAAGGTGGTTTACGTTTCAATC 57.573 39.130 0.00 0.00 35.34 2.67
242 243 5.278758 CCATCAAGGTGGTTTACGTTTCAAT 60.279 40.000 0.00 0.00 35.34 2.57
243 244 4.036971 CCATCAAGGTGGTTTACGTTTCAA 59.963 41.667 0.00 0.00 35.34 2.69
244 245 3.566322 CCATCAAGGTGGTTTACGTTTCA 59.434 43.478 0.00 0.00 35.34 2.69
245 246 4.155310 CCATCAAGGTGGTTTACGTTTC 57.845 45.455 0.00 0.00 35.34 2.78
258 259 1.542915 CTGGCTTGTTCACCATCAAGG 59.457 52.381 6.96 0.00 40.64 3.61
259 260 1.542915 CCTGGCTTGTTCACCATCAAG 59.457 52.381 0.00 0.00 42.44 3.02
260 261 1.619654 CCTGGCTTGTTCACCATCAA 58.380 50.000 0.00 0.00 34.82 2.57
261 262 0.251297 CCCTGGCTTGTTCACCATCA 60.251 55.000 0.00 0.00 34.82 3.07
262 263 0.967380 CCCCTGGCTTGTTCACCATC 60.967 60.000 0.00 0.00 34.82 3.51
263 264 1.077265 CCCCTGGCTTGTTCACCAT 59.923 57.895 0.00 0.00 34.82 3.55
264 265 2.520458 CCCCTGGCTTGTTCACCA 59.480 61.111 0.00 0.00 0.00 4.17
265 266 2.283173 CCCCCTGGCTTGTTCACC 60.283 66.667 0.00 0.00 0.00 4.02
266 267 0.759060 AAACCCCCTGGCTTGTTCAC 60.759 55.000 0.00 0.00 33.59 3.18
267 268 0.031616 AAAACCCCCTGGCTTGTTCA 60.032 50.000 0.00 0.00 33.59 3.18
268 269 0.679505 GAAAACCCCCTGGCTTGTTC 59.320 55.000 0.00 0.00 33.59 3.18
269 270 0.264657 AGAAAACCCCCTGGCTTGTT 59.735 50.000 0.00 0.00 33.59 2.83
270 271 0.469892 CAGAAAACCCCCTGGCTTGT 60.470 55.000 0.00 0.00 33.59 3.16
271 272 1.820010 GCAGAAAACCCCCTGGCTTG 61.820 60.000 0.00 0.00 33.59 4.01
272 273 1.533994 GCAGAAAACCCCCTGGCTT 60.534 57.895 0.00 0.00 33.59 4.35
273 274 1.140134 TAGCAGAAAACCCCCTGGCT 61.140 55.000 0.00 0.00 33.59 4.75
274 275 0.251608 TTAGCAGAAAACCCCCTGGC 60.252 55.000 0.00 0.00 33.59 4.85
275 276 1.075536 AGTTAGCAGAAAACCCCCTGG 59.924 52.381 0.00 0.00 37.80 4.45
276 277 2.162681 CAGTTAGCAGAAAACCCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
277 278 1.780919 ACAGTTAGCAGAAAACCCCCT 59.219 47.619 0.00 0.00 0.00 4.79
278 279 1.886542 CACAGTTAGCAGAAAACCCCC 59.113 52.381 0.00 0.00 0.00 5.40
279 280 2.583143 ACACAGTTAGCAGAAAACCCC 58.417 47.619 0.00 0.00 0.00 4.95
280 281 4.649088 AAACACAGTTAGCAGAAAACCC 57.351 40.909 0.00 0.00 0.00 4.11
281 282 6.691388 CACTTAAACACAGTTAGCAGAAAACC 59.309 38.462 0.00 0.00 0.00 3.27
282 283 6.691388 CCACTTAAACACAGTTAGCAGAAAAC 59.309 38.462 0.00 0.00 0.00 2.43
283 284 6.600032 TCCACTTAAACACAGTTAGCAGAAAA 59.400 34.615 0.00 0.00 0.00 2.29
284 285 6.116806 TCCACTTAAACACAGTTAGCAGAAA 58.883 36.000 0.00 0.00 0.00 2.52
285 286 5.676552 TCCACTTAAACACAGTTAGCAGAA 58.323 37.500 0.00 0.00 0.00 3.02
286 287 5.284861 TCCACTTAAACACAGTTAGCAGA 57.715 39.130 0.00 0.00 0.00 4.26
287 288 5.700832 TGATCCACTTAAACACAGTTAGCAG 59.299 40.000 0.00 0.00 0.00 4.24
288 289 5.616270 TGATCCACTTAAACACAGTTAGCA 58.384 37.500 0.00 0.00 0.00 3.49
289 290 6.743575 ATGATCCACTTAAACACAGTTAGC 57.256 37.500 0.00 0.00 0.00 3.09
290 291 9.653287 TCTAATGATCCACTTAAACACAGTTAG 57.347 33.333 0.00 0.00 0.00 2.34
291 292 9.653287 CTCTAATGATCCACTTAAACACAGTTA 57.347 33.333 0.00 0.00 0.00 2.24
292 293 8.375506 TCTCTAATGATCCACTTAAACACAGTT 58.624 33.333 0.00 0.00 0.00 3.16
293 294 7.907389 TCTCTAATGATCCACTTAAACACAGT 58.093 34.615 0.00 0.00 0.00 3.55
294 295 8.954950 ATCTCTAATGATCCACTTAAACACAG 57.045 34.615 0.00 0.00 0.00 3.66
295 296 8.948631 GATCTCTAATGATCCACTTAAACACA 57.051 34.615 0.00 0.00 37.47 3.72
307 308 6.179906 TCAAAGGTGGGATCTCTAATGATC 57.820 41.667 0.00 0.00 41.39 2.92
308 309 6.331042 TGATCAAAGGTGGGATCTCTAATGAT 59.669 38.462 0.00 0.00 40.41 2.45
309 310 5.667172 TGATCAAAGGTGGGATCTCTAATGA 59.333 40.000 0.00 0.00 40.41 2.57
310 311 5.933617 TGATCAAAGGTGGGATCTCTAATG 58.066 41.667 0.00 0.00 40.41 1.90
311 312 5.669447 ACTGATCAAAGGTGGGATCTCTAAT 59.331 40.000 0.00 0.00 40.41 1.73
312 313 5.032846 ACTGATCAAAGGTGGGATCTCTAA 58.967 41.667 0.00 0.00 40.41 2.10
313 314 4.406972 CACTGATCAAAGGTGGGATCTCTA 59.593 45.833 5.82 0.00 40.41 2.43
314 315 3.199508 CACTGATCAAAGGTGGGATCTCT 59.800 47.826 5.82 0.00 40.41 3.10
315 316 3.539604 CACTGATCAAAGGTGGGATCTC 58.460 50.000 5.82 0.00 40.41 2.75
316 317 2.356535 GCACTGATCAAAGGTGGGATCT 60.357 50.000 13.62 0.00 40.41 2.75
317 318 2.019984 GCACTGATCAAAGGTGGGATC 58.980 52.381 13.62 0.00 40.22 3.36
318 319 1.341383 GGCACTGATCAAAGGTGGGAT 60.341 52.381 13.62 0.00 0.00 3.85
319 320 0.038166 GGCACTGATCAAAGGTGGGA 59.962 55.000 13.62 0.00 0.00 4.37
320 321 1.308069 CGGCACTGATCAAAGGTGGG 61.308 60.000 13.62 0.00 0.00 4.61
321 322 0.606401 ACGGCACTGATCAAAGGTGG 60.606 55.000 13.62 3.08 0.00 4.61
322 323 1.197721 GAACGGCACTGATCAAAGGTG 59.802 52.381 8.77 8.77 0.00 4.00
323 324 1.523758 GAACGGCACTGATCAAAGGT 58.476 50.000 0.00 0.00 0.00 3.50
324 325 0.443869 CGAACGGCACTGATCAAAGG 59.556 55.000 0.00 0.00 0.00 3.11
325 326 1.148310 ACGAACGGCACTGATCAAAG 58.852 50.000 0.00 0.00 0.00 2.77
326 327 1.588674 AACGAACGGCACTGATCAAA 58.411 45.000 0.00 0.00 0.00 2.69
327 328 2.442212 TAACGAACGGCACTGATCAA 57.558 45.000 0.00 0.00 0.00 2.57
328 329 2.665649 ATAACGAACGGCACTGATCA 57.334 45.000 0.00 0.00 0.00 2.92
329 330 6.251589 CAGATATATAACGAACGGCACTGATC 59.748 42.308 0.00 0.00 0.00 2.92
330 331 6.072119 TCAGATATATAACGAACGGCACTGAT 60.072 38.462 0.00 0.00 0.00 2.90
331 332 5.239963 TCAGATATATAACGAACGGCACTGA 59.760 40.000 0.00 0.00 0.00 3.41
332 333 5.458015 TCAGATATATAACGAACGGCACTG 58.542 41.667 0.00 0.00 0.00 3.66
333 334 5.700722 TCAGATATATAACGAACGGCACT 57.299 39.130 0.00 0.00 0.00 4.40
334 335 5.288712 CCATCAGATATATAACGAACGGCAC 59.711 44.000 0.00 0.00 0.00 5.01
335 336 5.184287 TCCATCAGATATATAACGAACGGCA 59.816 40.000 0.00 0.00 0.00 5.69
336 337 5.515626 GTCCATCAGATATATAACGAACGGC 59.484 44.000 0.00 0.00 0.00 5.68
337 338 6.034591 GGTCCATCAGATATATAACGAACGG 58.965 44.000 0.00 0.00 0.00 4.44
338 339 6.527023 GTGGTCCATCAGATATATAACGAACG 59.473 42.308 0.00 0.00 0.00 3.95
339 340 6.527023 CGTGGTCCATCAGATATATAACGAAC 59.473 42.308 0.00 0.00 0.00 3.95
340 341 6.208007 ACGTGGTCCATCAGATATATAACGAA 59.792 38.462 11.84 0.00 0.00 3.85
341 342 5.708697 ACGTGGTCCATCAGATATATAACGA 59.291 40.000 11.84 0.00 0.00 3.85
342 343 5.800438 CACGTGGTCCATCAGATATATAACG 59.200 44.000 7.95 0.00 0.00 3.18
343 344 6.920817 TCACGTGGTCCATCAGATATATAAC 58.079 40.000 17.00 0.00 0.00 1.89
344 345 6.946009 TCTCACGTGGTCCATCAGATATATAA 59.054 38.462 17.00 0.00 0.00 0.98
345 346 6.481643 TCTCACGTGGTCCATCAGATATATA 58.518 40.000 17.00 0.00 0.00 0.86
346 347 5.325239 TCTCACGTGGTCCATCAGATATAT 58.675 41.667 17.00 0.00 0.00 0.86
347 348 4.725490 TCTCACGTGGTCCATCAGATATA 58.275 43.478 17.00 0.00 0.00 0.86
348 349 3.566351 TCTCACGTGGTCCATCAGATAT 58.434 45.455 17.00 0.00 0.00 1.63
349 350 3.012934 TCTCACGTGGTCCATCAGATA 57.987 47.619 17.00 0.00 0.00 1.98
350 351 1.852633 TCTCACGTGGTCCATCAGAT 58.147 50.000 17.00 0.00 0.00 2.90
351 352 1.627864 TTCTCACGTGGTCCATCAGA 58.372 50.000 17.00 6.23 0.00 3.27
352 353 2.680312 ATTCTCACGTGGTCCATCAG 57.320 50.000 17.00 3.60 0.00 2.90
353 354 3.417069 AAATTCTCACGTGGTCCATCA 57.583 42.857 17.00 0.00 0.00 3.07
354 355 4.766404 AAAAATTCTCACGTGGTCCATC 57.234 40.909 17.00 0.00 0.00 3.51
355 356 5.556915 TCTAAAAATTCTCACGTGGTCCAT 58.443 37.500 17.00 0.06 0.00 3.41
356 357 4.963373 TCTAAAAATTCTCACGTGGTCCA 58.037 39.130 17.00 0.00 0.00 4.02
357 358 6.496338 AATCTAAAAATTCTCACGTGGTCC 57.504 37.500 17.00 0.00 0.00 4.46
358 359 8.073768 TGAAAATCTAAAAATTCTCACGTGGTC 58.926 33.333 17.00 0.00 0.00 4.02
359 360 7.860872 GTGAAAATCTAAAAATTCTCACGTGGT 59.139 33.333 17.00 0.00 0.00 4.16
360 361 8.076178 AGTGAAAATCTAAAAATTCTCACGTGG 58.924 33.333 17.00 6.71 37.58 4.94
361 362 8.895845 CAGTGAAAATCTAAAAATTCTCACGTG 58.104 33.333 9.94 9.94 37.58 4.49
362 363 8.836413 TCAGTGAAAATCTAAAAATTCTCACGT 58.164 29.630 0.00 0.00 37.58 4.49
363 364 9.322776 CTCAGTGAAAATCTAAAAATTCTCACG 57.677 33.333 0.00 0.00 37.58 4.35
364 365 9.617975 CCTCAGTGAAAATCTAAAAATTCTCAC 57.382 33.333 0.00 0.00 33.70 3.51
365 366 9.573166 TCCTCAGTGAAAATCTAAAAATTCTCA 57.427 29.630 0.00 0.00 0.00 3.27
366 367 9.833182 GTCCTCAGTGAAAATCTAAAAATTCTC 57.167 33.333 0.00 0.00 0.00 2.87
367 368 8.797438 GGTCCTCAGTGAAAATCTAAAAATTCT 58.203 33.333 0.00 0.00 0.00 2.40
368 369 8.797438 AGGTCCTCAGTGAAAATCTAAAAATTC 58.203 33.333 0.00 0.00 0.00 2.17
369 370 8.712228 AGGTCCTCAGTGAAAATCTAAAAATT 57.288 30.769 0.00 0.00 0.00 1.82
370 371 8.712228 AAGGTCCTCAGTGAAAATCTAAAAAT 57.288 30.769 0.00 0.00 0.00 1.82
371 372 8.533569 AAAGGTCCTCAGTGAAAATCTAAAAA 57.466 30.769 0.00 0.00 0.00 1.94
372 373 8.533569 AAAAGGTCCTCAGTGAAAATCTAAAA 57.466 30.769 0.00 0.00 0.00 1.52
373 374 8.533569 AAAAAGGTCCTCAGTGAAAATCTAAA 57.466 30.769 0.00 0.00 0.00 1.85
395 396 4.015872 AGGCGAAGTATCAGGTGAAAAA 57.984 40.909 0.00 0.00 0.00 1.94
396 397 3.695830 AGGCGAAGTATCAGGTGAAAA 57.304 42.857 0.00 0.00 0.00 2.29
397 398 4.811969 TTAGGCGAAGTATCAGGTGAAA 57.188 40.909 0.00 0.00 0.00 2.69
398 399 4.811969 TTTAGGCGAAGTATCAGGTGAA 57.188 40.909 0.00 0.00 0.00 3.18
399 400 4.811969 TTTTAGGCGAAGTATCAGGTGA 57.188 40.909 0.00 0.00 0.00 4.02
400 401 5.175859 TCTTTTTAGGCGAAGTATCAGGTG 58.824 41.667 0.00 0.00 0.00 4.00
401 402 5.416271 TCTTTTTAGGCGAAGTATCAGGT 57.584 39.130 0.00 0.00 0.00 4.00
402 403 6.927294 ATTCTTTTTAGGCGAAGTATCAGG 57.073 37.500 0.00 0.00 0.00 3.86
403 404 8.879759 TGTTATTCTTTTTAGGCGAAGTATCAG 58.120 33.333 0.00 0.00 0.00 2.90
404 405 8.662141 GTGTTATTCTTTTTAGGCGAAGTATCA 58.338 33.333 0.00 0.00 0.00 2.15
405 406 8.662141 TGTGTTATTCTTTTTAGGCGAAGTATC 58.338 33.333 0.00 0.00 0.00 2.24
406 407 8.556213 TGTGTTATTCTTTTTAGGCGAAGTAT 57.444 30.769 0.00 0.00 0.00 2.12
407 408 7.966246 TGTGTTATTCTTTTTAGGCGAAGTA 57.034 32.000 0.00 0.00 0.00 2.24
408 409 6.870971 TGTGTTATTCTTTTTAGGCGAAGT 57.129 33.333 0.00 0.00 0.00 3.01
409 410 7.481798 GTGATGTGTTATTCTTTTTAGGCGAAG 59.518 37.037 0.00 0.00 0.00 3.79
410 411 7.041030 TGTGATGTGTTATTCTTTTTAGGCGAA 60.041 33.333 0.00 0.00 0.00 4.70
411 412 6.428465 TGTGATGTGTTATTCTTTTTAGGCGA 59.572 34.615 0.00 0.00 0.00 5.54
412 413 6.523201 GTGTGATGTGTTATTCTTTTTAGGCG 59.477 38.462 0.00 0.00 0.00 5.52
413 414 7.367285 TGTGTGATGTGTTATTCTTTTTAGGC 58.633 34.615 0.00 0.00 0.00 3.93
414 415 9.345517 CATGTGTGATGTGTTATTCTTTTTAGG 57.654 33.333 0.00 0.00 0.00 2.69
419 420 7.334171 TCGATCATGTGTGATGTGTTATTCTTT 59.666 33.333 0.00 0.00 44.96 2.52
424 425 6.983474 TTTCGATCATGTGTGATGTGTTAT 57.017 33.333 0.00 0.00 44.96 1.89
497 503 6.071784 TGGTAGTCGCTCAAGTTTATTACTGA 60.072 38.462 0.00 0.00 37.12 3.41
561 567 2.188062 TCGCTACCAAACCCGAAATT 57.812 45.000 0.00 0.00 0.00 1.82
566 572 1.931172 CTACAATCGCTACCAAACCCG 59.069 52.381 0.00 0.00 0.00 5.28
585 591 0.179034 GCCATTCCATCTTCCTCGCT 60.179 55.000 0.00 0.00 0.00 4.93
820 1006 2.513666 CGAAATAGCCAGCGCCCA 60.514 61.111 2.29 0.00 34.57 5.36
821 1007 3.279875 CCGAAATAGCCAGCGCCC 61.280 66.667 2.29 0.00 34.57 6.13
822 1008 3.953887 GCCGAAATAGCCAGCGCC 61.954 66.667 2.29 0.00 34.57 6.53
1224 1807 1.284982 CTCGAACACTTCCTGCACGG 61.285 60.000 0.00 0.00 0.00 4.94
1319 1913 1.965754 GCGTGAGAGAGCAGGGGAAT 61.966 60.000 0.00 0.00 0.00 3.01
1320 1914 2.650116 GCGTGAGAGAGCAGGGGAA 61.650 63.158 0.00 0.00 0.00 3.97
1411 2015 9.029368 CCCTCAGATAGTCAGATACATCAATTA 57.971 37.037 0.00 0.00 0.00 1.40
1466 2330 5.641155 AGCCAAACAGACTAATTAGGGTTT 58.359 37.500 16.73 17.84 31.25 3.27
1480 2344 6.260936 CCTATGGTCTTACATAAGCCAAACAG 59.739 42.308 14.62 12.32 40.34 3.16
1521 2391 1.018226 GCTCTACTGCAGCTGTGGTG 61.018 60.000 15.27 13.18 33.75 4.17
1534 2404 6.089954 GGCATTCTGAAACAAAATTGCTCTAC 59.910 38.462 9.06 0.00 0.00 2.59
1635 2546 7.829378 AAAGTAATTGCTACTGTACTAGTGC 57.171 36.000 5.39 4.49 40.14 4.40
1655 2569 8.974060 TTTCAAGTGAAATACTCCAGTAAAGT 57.026 30.769 2.32 0.00 39.18 2.66
1704 2619 4.667519 AGTTCCACGTCTCAACTAAACT 57.332 40.909 2.21 0.00 0.00 2.66
1717 2632 0.879090 GGGGCAAAAGTAGTTCCACG 59.121 55.000 0.00 0.00 0.00 4.94
1767 2682 6.486248 TGACTTCAAATTAAGCACGCATATC 58.514 36.000 0.00 0.00 0.00 1.63
1835 2761 5.222631 GGACTTCCTTTGTTAATTGCAGTG 58.777 41.667 0.00 0.00 0.00 3.66
1872 2798 6.619018 GCATGCATTACCAACATGAACAAAAG 60.619 38.462 14.21 0.00 43.04 2.27
1913 2839 5.419542 ACAGTACAGTGTACAGCATAATGG 58.580 41.667 30.09 12.82 0.00 3.16
2014 2941 3.089573 TGCTGCATATGACGAAGAGAG 57.910 47.619 6.97 0.00 0.00 3.20
2236 3164 7.420800 GGTTCTGATTGTCTTATGCCAATAAG 58.579 38.462 0.00 0.00 44.58 1.73
2237 3165 6.321181 GGGTTCTGATTGTCTTATGCCAATAA 59.679 38.462 0.00 0.00 31.67 1.40
2239 3167 4.646492 GGGTTCTGATTGTCTTATGCCAAT 59.354 41.667 0.00 0.00 34.11 3.16
2240 3168 4.016444 GGGTTCTGATTGTCTTATGCCAA 58.984 43.478 0.00 0.00 0.00 4.52
2241 3169 3.266772 AGGGTTCTGATTGTCTTATGCCA 59.733 43.478 0.00 0.00 0.00 4.92
2242 3170 3.629398 CAGGGTTCTGATTGTCTTATGCC 59.371 47.826 0.00 0.00 43.49 4.40
2281 3209 3.427528 GCATGTTGCACTGAATTGACAAG 59.572 43.478 0.00 0.00 44.26 3.16
2426 3354 4.202357 TGTGACCATCAGAGTGTAAAGCTT 60.202 41.667 0.00 0.00 0.00 3.74
2429 3357 5.300752 AGTTGTGACCATCAGAGTGTAAAG 58.699 41.667 0.00 0.00 0.00 1.85
2472 3400 4.796038 ATGAAACAGGAAATGGAAGCAG 57.204 40.909 0.00 0.00 0.00 4.24
2542 3470 6.850752 TTGTCCAGAGTACATATTCAGTGA 57.149 37.500 0.00 0.00 0.00 3.41
2812 3753 6.534634 AGCTTGACAGTGAAACCTTAGTATT 58.465 36.000 0.00 0.00 37.80 1.89
2827 3769 6.674694 ACAGAGCATATAAAAGCTTGACAG 57.325 37.500 0.00 0.00 42.04 3.51
2831 3779 7.041576 TGAGCATACAGAGCATATAAAAGCTTG 60.042 37.037 0.00 0.00 42.04 4.01
2844 3792 6.370994 ACTGCATTAATATGAGCATACAGAGC 59.629 38.462 9.25 4.64 36.28 4.09
2882 3830 1.307097 GATGGAGAGTTGAGGCATGC 58.693 55.000 9.90 9.90 0.00 4.06
2898 3846 3.306364 GGACGGAGGGAGTATGATTGATG 60.306 52.174 0.00 0.00 0.00 3.07
2908 3856 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2909 3857 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2910 3858 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2911 3859 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2912 3860 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2913 3861 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2914 3862 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2915 3863 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2916 3864 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2917 3865 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2918 3866 8.044309 TCTATTTTGATGACAAGTATTTCCGGA 58.956 33.333 0.00 0.00 37.32 5.14
2919 3867 8.208718 TCTATTTTGATGACAAGTATTTCCGG 57.791 34.615 0.00 0.00 37.32 5.14
2920 3868 9.655769 CATCTATTTTGATGACAAGTATTTCCG 57.344 33.333 0.00 0.00 44.71 4.30
2972 3920 9.325248 TCATTGGAATGGATGTATCTAGATGTA 57.675 33.333 15.79 4.44 37.03 2.29
2973 3921 8.099537 GTCATTGGAATGGATGTATCTAGATGT 58.900 37.037 15.79 1.25 37.03 3.06
2974 3922 8.098912 TGTCATTGGAATGGATGTATCTAGATG 58.901 37.037 15.79 0.00 37.03 2.90
2975 3923 8.211030 TGTCATTGGAATGGATGTATCTAGAT 57.789 34.615 10.73 10.73 37.03 1.98
2976 3924 7.616528 TGTCATTGGAATGGATGTATCTAGA 57.383 36.000 0.00 0.00 37.03 2.43
2977 3925 7.935755 ACTTGTCATTGGAATGGATGTATCTAG 59.064 37.037 0.00 0.00 37.03 2.43
2978 3926 7.805163 ACTTGTCATTGGAATGGATGTATCTA 58.195 34.615 0.00 0.00 37.03 1.98
2979 3927 6.666678 ACTTGTCATTGGAATGGATGTATCT 58.333 36.000 0.00 0.00 37.03 1.98
2980 3928 6.949352 ACTTGTCATTGGAATGGATGTATC 57.051 37.500 0.00 0.00 37.03 2.24
2981 3929 9.425248 AAATACTTGTCATTGGAATGGATGTAT 57.575 29.630 0.00 3.54 37.03 2.29
2982 3930 8.821686 AAATACTTGTCATTGGAATGGATGTA 57.178 30.769 0.00 1.74 37.03 2.29
2983 3931 7.147846 GGAAATACTTGTCATTGGAATGGATGT 60.148 37.037 0.00 0.00 37.03 3.06
2984 3932 7.205297 GGAAATACTTGTCATTGGAATGGATG 58.795 38.462 0.00 0.00 37.03 3.51
2985 3933 6.039717 CGGAAATACTTGTCATTGGAATGGAT 59.960 38.462 0.00 0.00 37.03 3.41
2986 3934 5.356751 CGGAAATACTTGTCATTGGAATGGA 59.643 40.000 0.00 0.00 37.03 3.41
2987 3935 5.450412 CCGGAAATACTTGTCATTGGAATGG 60.450 44.000 0.00 0.00 37.03 3.16
2988 3936 5.356751 TCCGGAAATACTTGTCATTGGAATG 59.643 40.000 0.00 0.00 37.75 2.67
2989 3937 5.505780 TCCGGAAATACTTGTCATTGGAAT 58.494 37.500 0.00 0.00 0.00 3.01
2990 3938 4.912586 TCCGGAAATACTTGTCATTGGAA 58.087 39.130 0.00 0.00 0.00 3.53
2991 3939 4.561500 TCCGGAAATACTTGTCATTGGA 57.438 40.909 0.00 0.00 0.00 3.53
2992 3940 4.036734 CCATCCGGAAATACTTGTCATTGG 59.963 45.833 9.01 2.27 0.00 3.16
2993 3941 4.881273 TCCATCCGGAAATACTTGTCATTG 59.119 41.667 9.01 0.00 38.83 2.82
2994 3942 5.110814 TCCATCCGGAAATACTTGTCATT 57.889 39.130 9.01 0.00 38.83 2.57
2995 3943 4.444876 CCTCCATCCGGAAATACTTGTCAT 60.445 45.833 9.01 0.00 42.21 3.06
2996 3944 3.118408 CCTCCATCCGGAAATACTTGTCA 60.118 47.826 9.01 0.00 42.21 3.58
2997 3945 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
2998 3946 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
2999 3947 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
3000 3948 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
3001 3949 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
3002 3950 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
3003 3951 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
3004 3952 2.090719 TCTACTCCCTCCATCCGGAAAT 60.091 50.000 9.01 0.00 42.21 2.17
3005 3953 1.289830 TCTACTCCCTCCATCCGGAAA 59.710 52.381 9.01 0.00 42.21 3.13
3006 3954 0.931468 TCTACTCCCTCCATCCGGAA 59.069 55.000 9.01 0.00 42.21 4.30
3007 3955 0.931468 TTCTACTCCCTCCATCCGGA 59.069 55.000 6.61 6.61 39.79 5.14
3008 3956 1.896465 GATTCTACTCCCTCCATCCGG 59.104 57.143 0.00 0.00 0.00 5.14
3009 3957 1.542030 CGATTCTACTCCCTCCATCCG 59.458 57.143 0.00 0.00 0.00 4.18
3010 3958 2.599677 ACGATTCTACTCCCTCCATCC 58.400 52.381 0.00 0.00 0.00 3.51
3011 3959 4.767928 ACATACGATTCTACTCCCTCCATC 59.232 45.833 0.00 0.00 0.00 3.51
3012 3960 4.742012 ACATACGATTCTACTCCCTCCAT 58.258 43.478 0.00 0.00 0.00 3.41
3013 3961 4.180377 ACATACGATTCTACTCCCTCCA 57.820 45.455 0.00 0.00 0.00 3.86
3014 3962 4.583489 TGAACATACGATTCTACTCCCTCC 59.417 45.833 0.00 0.00 0.00 4.30
3015 3963 5.769484 TGAACATACGATTCTACTCCCTC 57.231 43.478 0.00 0.00 0.00 4.30
3016 3964 9.529823 TTATATGAACATACGATTCTACTCCCT 57.470 33.333 0.00 0.00 0.00 4.20
3092 4066 8.303876 ACTTGAAAGCAACCGATAAAATAACAT 58.696 29.630 0.00 0.00 0.00 2.71
3161 4136 6.303839 AGTTGAAGCAGGGTAATAGAAAACA 58.696 36.000 0.00 0.00 0.00 2.83
3180 4155 3.369471 GCATGAGGGCTACACTAAGTTGA 60.369 47.826 0.00 0.00 0.00 3.18
3237 4212 1.133025 GCATGACCCAGCAATGTGTAC 59.867 52.381 0.00 0.00 0.00 2.90
3246 4221 1.081242 CGTTTGTGCATGACCCAGC 60.081 57.895 0.00 0.00 0.00 4.85
3252 4227 5.940192 AAAACTATCTCGTTTGTGCATGA 57.060 34.783 0.00 0.00 37.20 3.07
3275 4250 9.685276 TTTGGAACATATACAGAAGATCACAAT 57.315 29.630 0.00 0.00 39.30 2.71
3276 4251 9.166173 CTTTGGAACATATACAGAAGATCACAA 57.834 33.333 0.00 0.00 39.30 3.33
3320 4295 2.586648 AACAGGAACTTTAGCAGGGG 57.413 50.000 0.00 0.00 34.60 4.79
3380 4355 8.919777 ATAACCCAAAGTAAATAGCCTATGTC 57.080 34.615 0.00 0.00 0.00 3.06
3421 4396 8.994429 TTCTTTGCACAAAATTAAAACTCTCA 57.006 26.923 0.00 0.00 0.00 3.27
3497 4480 2.517959 TGCCTTTATGCATATCCAGGC 58.482 47.619 29.03 29.03 46.03 4.85
3533 4516 7.705325 AGAGTATTCGACTAAATAAATGTGCGT 59.295 33.333 0.00 0.00 39.06 5.24
3534 4517 7.998767 CAGAGTATTCGACTAAATAAATGTGCG 59.001 37.037 0.00 0.00 39.06 5.34
3535 4518 7.794349 GCAGAGTATTCGACTAAATAAATGTGC 59.206 37.037 0.00 0.00 39.06 4.57
3537 4520 9.250624 GAGCAGAGTATTCGACTAAATAAATGT 57.749 33.333 0.00 0.00 39.06 2.71
3550 4543 4.800993 CACTTAGTTGGAGCAGAGTATTCG 59.199 45.833 0.00 0.00 0.00 3.34
3554 4547 2.897326 TGCACTTAGTTGGAGCAGAGTA 59.103 45.455 0.00 0.00 0.00 2.59
3557 4550 3.423539 AATGCACTTAGTTGGAGCAGA 57.576 42.857 0.00 0.00 38.75 4.26
3560 4553 3.375299 CCAGTAATGCACTTAGTTGGAGC 59.625 47.826 0.00 0.00 34.26 4.70
3577 4570 5.159273 TGTCATCTGTGCATTTACCAGTA 57.841 39.130 0.00 0.00 0.00 2.74
3583 4576 7.028962 GCAAAACTATGTCATCTGTGCATTTA 58.971 34.615 0.00 0.00 0.00 1.40
3585 4578 5.404946 GCAAAACTATGTCATCTGTGCATT 58.595 37.500 0.00 0.00 0.00 3.56
3593 4586 6.916387 CAGAATCATGGCAAAACTATGTCATC 59.084 38.462 0.00 0.00 43.48 2.92
3595 4588 5.393352 GCAGAATCATGGCAAAACTATGTCA 60.393 40.000 0.00 0.00 39.61 3.58
3606 4599 4.261280 CGTTGAATATGCAGAATCATGGCA 60.261 41.667 0.00 0.00 42.43 4.92
3610 4603 9.027129 CAAAATTCGTTGAATATGCAGAATCAT 57.973 29.630 0.00 0.00 31.46 2.45
3656 4649 2.029844 GGAACTGAGGCGTGACAGC 61.030 63.158 0.00 0.00 37.61 4.40
3675 4668 5.106555 ACCACTCACTCGCAATTAATTCAAG 60.107 40.000 0.00 0.00 0.00 3.02
3682 4675 1.270571 TGCACCACTCACTCGCAATTA 60.271 47.619 0.00 0.00 0.00 1.40
3687 4680 0.389817 TATGTGCACCACTCACTCGC 60.390 55.000 15.69 0.00 35.11 5.03
3707 4700 2.665603 GCAGAGACCAGGACCACC 59.334 66.667 0.00 0.00 0.00 4.61
3775 4774 6.524586 GCTTCATCGTTCAGGTTTAAAAGATG 59.475 38.462 5.14 5.14 40.48 2.90
3781 4780 3.751175 CAGGCTTCATCGTTCAGGTTTAA 59.249 43.478 0.00 0.00 0.00 1.52
3782 4781 3.334691 CAGGCTTCATCGTTCAGGTTTA 58.665 45.455 0.00 0.00 0.00 2.01
3792 4791 0.962356 AAGGTTGGCAGGCTTCATCG 60.962 55.000 0.00 0.00 0.00 3.84
3799 4798 1.827789 TCACACAAGGTTGGCAGGC 60.828 57.895 0.00 0.00 0.00 4.85
4048 5065 2.047179 GTTCGAAAGGGCCTCGCT 60.047 61.111 6.46 0.00 36.25 4.93
4049 5066 1.964373 TTGTTCGAAAGGGCCTCGC 60.964 57.895 6.46 0.04 36.25 5.03
4122 5139 4.536316 CAGAGTCATCTGCAGCCC 57.464 61.111 9.47 0.00 46.19 5.19
4140 5157 3.614159 AACCCGCGTTTTCTTTCTAAC 57.386 42.857 4.92 0.00 0.00 2.34
4174 5192 3.309436 TTCCCAGGCACGTCATCGG 62.309 63.158 0.00 0.00 41.85 4.18
4181 5199 1.144936 GATCTCCTTCCCAGGCACG 59.855 63.158 0.00 0.00 40.58 5.34
4193 5211 1.482593 TCTTCTTTGCCCTCGATCTCC 59.517 52.381 0.00 0.00 0.00 3.71
4194 5212 2.969628 TCTTCTTTGCCCTCGATCTC 57.030 50.000 0.00 0.00 0.00 2.75
4195 5213 2.744494 GCATCTTCTTTGCCCTCGATCT 60.744 50.000 0.00 0.00 33.95 2.75
4196 5214 1.601430 GCATCTTCTTTGCCCTCGATC 59.399 52.381 0.00 0.00 33.95 3.69
4197 5215 1.211457 AGCATCTTCTTTGCCCTCGAT 59.789 47.619 0.00 0.00 41.06 3.59
4209 5227 4.745649 ACCTACAACGTCTTAGCATCTTC 58.254 43.478 0.00 0.00 0.00 2.87
4270 5288 8.298854 GGCATTTCTTTTTATTGGCAAAAGATT 58.701 29.630 3.01 0.00 45.36 2.40
4275 5293 4.453819 CCGGCATTTCTTTTTATTGGCAAA 59.546 37.500 3.01 0.00 33.49 3.68
4280 5298 3.860641 AGGCCGGCATTTCTTTTTATTG 58.139 40.909 30.85 0.00 0.00 1.90
4283 5301 5.394773 GGATTAAGGCCGGCATTTCTTTTTA 60.395 40.000 33.16 9.14 0.00 1.52
4284 5302 4.503910 GATTAAGGCCGGCATTTCTTTTT 58.496 39.130 33.16 13.47 0.00 1.94
4302 5320 3.655615 AAATTAGCCACCACCGGATTA 57.344 42.857 9.46 0.00 0.00 1.75
4316 5334 6.730960 TCCTGGTTAACGCTACAAAATTAG 57.269 37.500 0.00 0.00 0.00 1.73
4350 5369 7.125792 ACGGAGGAAGTACTTATCAAATCAT 57.874 36.000 8.42 0.00 0.00 2.45
4390 5409 9.228949 GGTACATCCTTATCTAGACGAATCTAA 57.771 37.037 0.00 0.00 36.98 2.10
4392 5411 7.463431 AGGTACATCCTTATCTAGACGAATCT 58.537 38.462 0.00 0.00 45.67 2.40
4393 5412 7.690952 AGGTACATCCTTATCTAGACGAATC 57.309 40.000 0.00 0.00 45.67 2.52
4396 5415 9.664332 GTATTAGGTACATCCTTATCTAGACGA 57.336 37.037 0.00 0.00 45.67 4.20
4397 5416 9.669887 AGTATTAGGTACATCCTTATCTAGACG 57.330 37.037 0.00 0.00 45.67 4.18
4405 5424 7.862372 CGCGTTTTAGTATTAGGTACATCCTTA 59.138 37.037 0.00 0.00 45.67 2.69
4406 5425 6.698766 CGCGTTTTAGTATTAGGTACATCCTT 59.301 38.462 0.00 0.00 45.67 3.36
4408 5427 6.142958 GTCGCGTTTTAGTATTAGGTACATCC 59.857 42.308 5.77 0.00 35.67 3.51
4415 5434 6.823678 ATCAAGTCGCGTTTTAGTATTAGG 57.176 37.500 5.77 0.00 0.00 2.69
4419 5438 6.420008 GGATGTATCAAGTCGCGTTTTAGTAT 59.580 38.462 5.77 0.00 0.00 2.12
4420 5439 5.745294 GGATGTATCAAGTCGCGTTTTAGTA 59.255 40.000 5.77 0.00 0.00 1.82
4421 5440 4.565564 GGATGTATCAAGTCGCGTTTTAGT 59.434 41.667 5.77 0.00 0.00 2.24
4422 5441 4.804139 AGGATGTATCAAGTCGCGTTTTAG 59.196 41.667 5.77 0.00 0.00 1.85
4425 5444 2.930040 CAGGATGTATCAAGTCGCGTTT 59.070 45.455 5.77 0.00 0.00 3.60
4426 5445 2.540515 CAGGATGTATCAAGTCGCGTT 58.459 47.619 5.77 0.00 0.00 4.84
4427 5446 2.209838 CAGGATGTATCAAGTCGCGT 57.790 50.000 5.77 0.00 0.00 6.01
4443 5462 3.162666 TCACTGAACCTACACCTACAGG 58.837 50.000 0.00 0.00 42.17 4.00
4444 5463 4.557205 GTTCACTGAACCTACACCTACAG 58.443 47.826 10.42 0.00 36.65 2.74
4459 5478 0.591170 AAATGCCGTTCGGTTCACTG 59.409 50.000 12.81 0.00 0.00 3.66
4460 5479 0.872388 GAAATGCCGTTCGGTTCACT 59.128 50.000 12.81 0.00 0.00 3.41
4461 5480 0.589223 TGAAATGCCGTTCGGTTCAC 59.411 50.000 12.81 0.00 0.00 3.18
4465 5484 0.309612 GTTGTGAAATGCCGTTCGGT 59.690 50.000 12.81 0.00 0.00 4.69
4466 5485 0.386731 GGTTGTGAAATGCCGTTCGG 60.387 55.000 6.90 6.90 0.00 4.30
4467 5486 0.591170 AGGTTGTGAAATGCCGTTCG 59.409 50.000 0.00 0.00 0.00 3.95
4469 5488 2.952978 TGTAAGGTTGTGAAATGCCGTT 59.047 40.909 0.00 0.00 0.00 4.44
4475 5792 5.995282 TCGAACATCTGTAAGGTTGTGAAAT 59.005 36.000 0.00 0.00 32.37 2.17
4476 5793 5.361427 TCGAACATCTGTAAGGTTGTGAAA 58.639 37.500 0.00 0.00 32.37 2.69
4477 5794 4.951254 TCGAACATCTGTAAGGTTGTGAA 58.049 39.130 0.00 0.00 32.37 3.18
4504 5821 2.975851 CGAATTCAGTCAACTTTGCTGC 59.024 45.455 6.22 0.00 34.53 5.25
4505 5822 4.214980 ACGAATTCAGTCAACTTTGCTG 57.785 40.909 6.22 6.93 35.27 4.41
4506 5823 4.083802 GCTACGAATTCAGTCAACTTTGCT 60.084 41.667 6.22 0.00 0.00 3.91
4507 5824 4.151798 GCTACGAATTCAGTCAACTTTGC 58.848 43.478 6.22 0.00 0.00 3.68
4511 5828 1.993370 GCGCTACGAATTCAGTCAACT 59.007 47.619 0.00 0.00 0.00 3.16
4586 5944 4.357947 TGTCGACTGACTGCGGCC 62.358 66.667 17.92 0.00 45.70 6.13
4587 5945 3.106407 GTGTCGACTGACTGCGGC 61.106 66.667 17.92 0.00 45.70 6.53
4588 5946 1.299850 TTGTGTCGACTGACTGCGG 60.300 57.895 17.92 0.00 45.70 5.69
4589 5947 1.548973 GGTTGTGTCGACTGACTGCG 61.549 60.000 17.92 0.00 45.70 5.18
4590 5948 1.222115 GGGTTGTGTCGACTGACTGC 61.222 60.000 17.92 4.77 45.70 4.40
4601 5975 0.827507 GGCAGTGGATTGGGTTGTGT 60.828 55.000 0.00 0.00 0.00 3.72
4756 6140 0.601841 GGTGGTGGGTATATTCGCGG 60.602 60.000 6.13 0.00 0.00 6.46
4778 6162 2.109181 GGCGAGATGGGTAGTGGC 59.891 66.667 0.00 0.00 0.00 5.01
4806 6197 0.957395 GGATGTGGCAGTGTGTGAGG 60.957 60.000 0.00 0.00 0.00 3.86
4840 6238 1.940613 GCGGTGTTGGAGTGGATATTC 59.059 52.381 0.00 0.00 0.00 1.75
4849 6247 3.443045 GCCATGGCGGTGTTGGAG 61.443 66.667 23.48 0.00 36.97 3.86
4973 6376 2.822399 GACCGGATTGAGGCGGAT 59.178 61.111 9.46 0.00 0.00 4.18
4982 6385 3.834799 GGCGAGGACGACCGGATT 61.835 66.667 9.46 0.00 42.35 3.01
5051 6474 1.447317 GGGCGAGCAGAGAGAGAGAG 61.447 65.000 0.00 0.00 0.00 3.20
5052 6475 1.453015 GGGCGAGCAGAGAGAGAGA 60.453 63.158 0.00 0.00 0.00 3.10
5053 6476 2.489275 GGGGCGAGCAGAGAGAGAG 61.489 68.421 0.00 0.00 0.00 3.20
5054 6477 2.441164 GGGGCGAGCAGAGAGAGA 60.441 66.667 0.00 0.00 0.00 3.10
5055 6478 3.898509 CGGGGCGAGCAGAGAGAG 61.899 72.222 0.00 0.00 0.00 3.20
5056 6479 4.742649 ACGGGGCGAGCAGAGAGA 62.743 66.667 0.00 0.00 0.00 3.10
5062 6485 2.033448 AAATCAACGGGGCGAGCA 59.967 55.556 0.00 0.00 0.00 4.26
5068 6491 0.796312 CAGACACGAAATCAACGGGG 59.204 55.000 0.00 0.00 38.55 5.73
5071 6494 0.785708 GCGCAGACACGAAATCAACG 60.786 55.000 0.30 0.00 34.06 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.