Multiple sequence alignment - TraesCS2B01G568000
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS2B01G568000
chr2B
100.000
5729
0
0
1
5729
758895436
758901164
0.000000e+00
10580.0
1
TraesCS2B01G568000
chr2B
83.634
1937
280
27
852
2768
706792961
706791042
0.000000e+00
1786.0
2
TraesCS2B01G568000
chr2B
85.874
1699
205
20
2881
4563
706790847
706789168
0.000000e+00
1775.0
3
TraesCS2B01G568000
chr2B
80.207
1354
230
25
1062
2387
758666322
758667665
0.000000e+00
981.0
4
TraesCS2B01G568000
chr2B
91.064
235
20
1
191
425
758673445
758673678
3.330000e-82
316.0
5
TraesCS2B01G568000
chr2D
88.723
2545
162
43
340
2791
619572386
619574898
0.000000e+00
2994.0
6
TraesCS2B01G568000
chr2D
90.277
2314
168
26
2791
5086
619574961
619577235
0.000000e+00
2974.0
7
TraesCS2B01G568000
chr2D
82.369
1781
239
47
2918
4674
585694262
585692533
0.000000e+00
1480.0
8
TraesCS2B01G568000
chr2D
80.258
1783
284
39
1038
2791
585696208
585694465
0.000000e+00
1280.0
9
TraesCS2B01G568000
chr2D
83.546
1331
212
2
1027
2350
585740506
585739176
0.000000e+00
1238.0
10
TraesCS2B01G568000
chr2D
80.267
1348
240
15
1062
2387
619566035
619567378
0.000000e+00
992.0
11
TraesCS2B01G568000
chr2D
83.929
1008
137
15
2919
3921
585738381
585737394
0.000000e+00
941.0
12
TraesCS2B01G568000
chr2D
85.185
81
5
6
4957
5033
593118599
593118676
6.160000e-10
76.8
13
TraesCS2B01G568000
chr2A
88.795
2365
185
32
307
2613
751036533
751038875
0.000000e+00
2826.0
14
TraesCS2B01G568000
chr2A
89.459
1831
131
18
309
2110
751171224
751173021
0.000000e+00
2255.0
15
TraesCS2B01G568000
chr2A
86.889
1678
192
17
2897
4559
751173370
751175034
0.000000e+00
1855.0
16
TraesCS2B01G568000
chr2A
85.998
1664
187
27
1060
2715
751013336
751014961
0.000000e+00
1740.0
17
TraesCS2B01G568000
chr2A
89.751
1327
103
17
2812
4129
751048420
751049722
0.000000e+00
1666.0
18
TraesCS2B01G568000
chr2A
89.039
1259
114
13
2878
4129
751015026
751016267
0.000000e+00
1539.0
19
TraesCS2B01G568000
chr2A
82.273
1777
243
46
2918
4674
719737820
719736096
0.000000e+00
1471.0
20
TraesCS2B01G568000
chr2A
92.517
735
50
3
3227
3957
751055339
751056072
0.000000e+00
1048.0
21
TraesCS2B01G568000
chr2A
88.509
731
74
10
3948
4674
751056916
751057640
0.000000e+00
876.0
22
TraesCS2B01G568000
chr2A
92.191
397
27
3
4693
5086
751022036
751022431
5.010000e-155
558.0
23
TraesCS2B01G568000
chr2A
87.665
454
46
3
4235
4682
751016383
751016832
2.370000e-143
520.0
24
TraesCS2B01G568000
chr2A
87.445
454
47
3
4235
4682
751049838
751050287
1.100000e-141
514.0
25
TraesCS2B01G568000
chr2A
83.804
531
70
9
1033
1560
719798339
719797822
1.860000e-134
490.0
26
TraesCS2B01G568000
chr2A
79.367
664
90
24
4022
4674
719727705
719727078
1.910000e-114
424.0
27
TraesCS2B01G568000
chr2A
85.897
234
31
2
192
424
751170379
751170611
1.230000e-61
248.0
28
TraesCS2B01G568000
chr2A
83.761
234
36
2
192
424
751031402
751031634
2.690000e-53
220.0
29
TraesCS2B01G568000
chr3A
96.575
584
20
0
5144
5727
547397758
547397175
0.000000e+00
968.0
30
TraesCS2B01G568000
chr5B
84.896
576
73
8
5154
5727
470285701
470286264
2.320000e-158
569.0
31
TraesCS2B01G568000
chr5B
78.862
123
22
3
4955
5075
582153241
582153361
4.760000e-11
80.5
32
TraesCS2B01G568000
chr5B
86.364
66
6
3
4957
5019
582157930
582157995
1.030000e-07
69.4
33
TraesCS2B01G568000
chr5D
76.988
591
116
19
5144
5726
329430875
329430297
2.580000e-83
320.0
34
TraesCS2B01G568000
chr5D
81.452
124
17
6
4955
5075
475005074
475005194
4.720000e-16
97.1
35
TraesCS2B01G568000
chr5D
85.714
63
6
3
4957
5016
126268690
126268628
4.790000e-06
63.9
36
TraesCS2B01G568000
chr1D
81.301
123
17
5
4957
5075
33593957
33594077
1.700000e-15
95.3
37
TraesCS2B01G568000
chr1D
81.481
81
12
3
4977
5055
387470098
387470019
4.790000e-06
63.9
38
TraesCS2B01G568000
chr7D
100.000
28
0
0
5006
5033
25874100
25874127
1.000000e-02
52.8
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS2B01G568000
chr2B
758895436
758901164
5728
False
10580.000000
10580
100.000000
1
5729
1
chr2B.!!$F3
5728
1
TraesCS2B01G568000
chr2B
706789168
706792961
3793
True
1780.500000
1786
84.754000
852
4563
2
chr2B.!!$R1
3711
2
TraesCS2B01G568000
chr2B
758666322
758667665
1343
False
981.000000
981
80.207000
1062
2387
1
chr2B.!!$F1
1325
3
TraesCS2B01G568000
chr2D
619572386
619577235
4849
False
2984.000000
2994
89.500000
340
5086
2
chr2D.!!$F3
4746
4
TraesCS2B01G568000
chr2D
585692533
585696208
3675
True
1380.000000
1480
81.313500
1038
4674
2
chr2D.!!$R1
3636
5
TraesCS2B01G568000
chr2D
585737394
585740506
3112
True
1089.500000
1238
83.737500
1027
3921
2
chr2D.!!$R2
2894
6
TraesCS2B01G568000
chr2D
619566035
619567378
1343
False
992.000000
992
80.267000
1062
2387
1
chr2D.!!$F2
1325
7
TraesCS2B01G568000
chr2A
751036533
751038875
2342
False
2826.000000
2826
88.795000
307
2613
1
chr2A.!!$F3
2306
8
TraesCS2B01G568000
chr2A
719736096
719737820
1724
True
1471.000000
1471
82.273000
2918
4674
1
chr2A.!!$R2
1756
9
TraesCS2B01G568000
chr2A
751170379
751175034
4655
False
1452.666667
2255
87.415000
192
4559
3
chr2A.!!$F7
4367
10
TraesCS2B01G568000
chr2A
751013336
751016832
3496
False
1266.333333
1740
87.567333
1060
4682
3
chr2A.!!$F4
3622
11
TraesCS2B01G568000
chr2A
751048420
751050287
1867
False
1090.000000
1666
88.598000
2812
4682
2
chr2A.!!$F5
1870
12
TraesCS2B01G568000
chr2A
751055339
751057640
2301
False
962.000000
1048
90.513000
3227
4674
2
chr2A.!!$F6
1447
13
TraesCS2B01G568000
chr2A
719797822
719798339
517
True
490.000000
490
83.804000
1033
1560
1
chr2A.!!$R3
527
14
TraesCS2B01G568000
chr2A
719727078
719727705
627
True
424.000000
424
79.367000
4022
4674
1
chr2A.!!$R1
652
15
TraesCS2B01G568000
chr3A
547397175
547397758
583
True
968.000000
968
96.575000
5144
5727
1
chr3A.!!$R1
583
16
TraesCS2B01G568000
chr5B
470285701
470286264
563
False
569.000000
569
84.896000
5154
5727
1
chr5B.!!$F1
573
17
TraesCS2B01G568000
chr5D
329430297
329430875
578
True
320.000000
320
76.988000
5144
5726
1
chr5D.!!$R2
582
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
83
84
0.035458
GAGCCTATATGCTGCCCGTT
59.965
55.000
7.29
0.0
42.95
4.44
F
138
139
0.035820
TGTAGCTTTTAGGCCCGGTG
60.036
55.000
0.00
0.0
0.00
4.94
F
175
176
0.172352
GACAGGCCTCTGAGAGAACG
59.828
60.000
11.82
0.0
43.49
3.95
F
297
298
0.178987
TATGCGTCTCCTCCTCCTCC
60.179
60.000
0.00
0.0
0.00
4.30
F
380
1114
0.181587
TCGAAAGCCAAGTCAACCCA
59.818
50.000
0.00
0.0
0.00
4.51
F
1707
2536
0.248336
CTGCGCTCGACGGTGTATTA
60.248
55.000
9.73
0.0
43.93
0.98
F
2496
3366
2.030893
TCTTTCTTCCGCATTTGTGCTG
60.031
45.455
0.00
0.0
0.00
4.41
F
4134
6262
0.820871
GAAGATCAGCTCACGTCCCT
59.179
55.000
0.00
0.0
0.00
4.20
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1731
2564
0.181350
GGGACATGATGGGACCTGAC
59.819
60.000
0.00
0.0
0.00
3.51
R
2137
2970
0.457853
CTGCATTCTGCTGCGCATTT
60.458
50.000
12.24
0.0
45.31
2.32
R
2229
3071
1.929494
TCCCCCATCCAAACTAAGCAT
59.071
47.619
0.00
0.0
0.00
3.79
R
2350
3197
2.991250
AGGCAATCCATCACACAGTAC
58.009
47.619
0.00
0.0
33.74
2.73
R
2403
3267
8.752187
CCACCTTAGTAAACTTAGTGGTATACA
58.248
37.037
5.01
0.0
35.87
2.29
R
2620
3516
1.135859
CGTCTGACTTTGATGCAAGGC
60.136
52.381
6.21
0.0
0.00
4.35
R
4247
6424
0.819582
GCCTGAAACATGGTGATGGG
59.180
55.000
0.00
0.0
33.39
4.00
R
5141
7347
1.202359
GCCGTTGGCTTGTCAAAAAGA
60.202
47.619
0.00
0.0
46.69
2.52
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
21
22
3.777478
CTCGTTAATTAGTTGCTCCCGA
58.223
45.455
0.00
0.00
0.00
5.14
22
23
3.514645
TCGTTAATTAGTTGCTCCCGAC
58.485
45.455
0.00
0.00
0.00
4.79
23
24
3.056678
TCGTTAATTAGTTGCTCCCGACA
60.057
43.478
0.00
0.00
0.00
4.35
24
25
3.306166
CGTTAATTAGTTGCTCCCGACAG
59.694
47.826
0.00
0.00
0.00
3.51
25
26
4.501071
GTTAATTAGTTGCTCCCGACAGA
58.499
43.478
0.00
0.00
0.00
3.41
26
27
3.914426
AATTAGTTGCTCCCGACAGAT
57.086
42.857
0.00
0.00
0.00
2.90
27
28
2.672961
TTAGTTGCTCCCGACAGATG
57.327
50.000
0.00
0.00
0.00
2.90
28
29
1.557099
TAGTTGCTCCCGACAGATGT
58.443
50.000
0.00
0.00
0.00
3.06
29
30
0.247736
AGTTGCTCCCGACAGATGTC
59.752
55.000
2.78
2.78
41.47
3.06
30
31
0.037326
GTTGCTCCCGACAGATGTCA
60.037
55.000
13.09
0.00
44.99
3.58
31
32
0.247460
TTGCTCCCGACAGATGTCAG
59.753
55.000
13.09
1.65
44.99
3.51
32
33
1.520342
GCTCCCGACAGATGTCAGC
60.520
63.158
13.09
10.19
44.99
4.26
33
34
1.893062
CTCCCGACAGATGTCAGCA
59.107
57.895
13.09
0.00
44.99
4.41
34
35
0.247460
CTCCCGACAGATGTCAGCAA
59.753
55.000
13.09
0.00
44.99
3.91
35
36
0.684535
TCCCGACAGATGTCAGCAAA
59.315
50.000
13.09
0.00
44.99
3.68
36
37
1.278985
TCCCGACAGATGTCAGCAAAT
59.721
47.619
13.09
0.00
44.99
2.32
37
38
1.399440
CCCGACAGATGTCAGCAAATG
59.601
52.381
13.09
0.00
44.99
2.32
38
39
2.079158
CCGACAGATGTCAGCAAATGT
58.921
47.619
13.09
0.00
44.99
2.71
39
40
2.485426
CCGACAGATGTCAGCAAATGTT
59.515
45.455
13.09
0.00
44.99
2.71
40
41
3.058016
CCGACAGATGTCAGCAAATGTTT
60.058
43.478
13.09
0.00
44.99
2.83
41
42
4.539870
CGACAGATGTCAGCAAATGTTTT
58.460
39.130
13.09
0.00
44.99
2.43
42
43
4.977963
CGACAGATGTCAGCAAATGTTTTT
59.022
37.500
13.09
0.00
44.99
1.94
62
63
4.799564
TTTTAGGGGTAGCAAATGCAAG
57.200
40.909
8.28
0.00
45.16
4.01
63
64
3.730215
TTAGGGGTAGCAAATGCAAGA
57.270
42.857
8.28
0.00
45.16
3.02
64
65
2.134789
AGGGGTAGCAAATGCAAGAG
57.865
50.000
8.28
0.00
45.16
2.85
65
66
1.635487
AGGGGTAGCAAATGCAAGAGA
59.365
47.619
8.28
0.00
45.16
3.10
66
67
2.019984
GGGGTAGCAAATGCAAGAGAG
58.980
52.381
8.28
0.00
45.16
3.20
67
68
1.403323
GGGTAGCAAATGCAAGAGAGC
59.597
52.381
8.28
0.00
45.16
4.09
68
69
1.403323
GGTAGCAAATGCAAGAGAGCC
59.597
52.381
8.28
0.00
45.16
4.70
69
70
2.363683
GTAGCAAATGCAAGAGAGCCT
58.636
47.619
8.28
0.00
45.16
4.58
70
71
2.795231
AGCAAATGCAAGAGAGCCTA
57.205
45.000
8.28
0.00
45.16
3.93
71
72
3.294038
AGCAAATGCAAGAGAGCCTAT
57.706
42.857
8.28
0.00
45.16
2.57
72
73
4.428294
AGCAAATGCAAGAGAGCCTATA
57.572
40.909
8.28
0.00
45.16
1.31
73
74
4.983053
AGCAAATGCAAGAGAGCCTATAT
58.017
39.130
8.28
0.00
45.16
0.86
74
75
4.760715
AGCAAATGCAAGAGAGCCTATATG
59.239
41.667
8.28
0.00
45.16
1.78
75
76
4.615452
GCAAATGCAAGAGAGCCTATATGC
60.615
45.833
0.00
0.00
41.59
3.14
76
77
4.637387
AATGCAAGAGAGCCTATATGCT
57.363
40.909
1.73
1.73
46.37
3.79
77
78
3.397849
TGCAAGAGAGCCTATATGCTG
57.602
47.619
7.29
0.00
42.95
4.41
78
79
2.075338
GCAAGAGAGCCTATATGCTGC
58.925
52.381
7.29
1.67
42.95
5.25
79
80
2.697654
CAAGAGAGCCTATATGCTGCC
58.302
52.381
7.29
0.00
42.95
4.85
80
81
1.274712
AGAGAGCCTATATGCTGCCC
58.725
55.000
7.29
0.00
42.95
5.36
81
82
0.108424
GAGAGCCTATATGCTGCCCG
60.108
60.000
7.29
0.00
42.95
6.13
82
83
0.833834
AGAGCCTATATGCTGCCCGT
60.834
55.000
7.29
0.00
42.95
5.28
83
84
0.035458
GAGCCTATATGCTGCCCGTT
59.965
55.000
7.29
0.00
42.95
4.44
84
85
0.474184
AGCCTATATGCTGCCCGTTT
59.526
50.000
1.27
0.00
40.90
3.60
85
86
0.875059
GCCTATATGCTGCCCGTTTC
59.125
55.000
0.00
0.00
0.00
2.78
86
87
1.543429
GCCTATATGCTGCCCGTTTCT
60.543
52.381
0.00
0.00
0.00
2.52
87
88
2.417719
CCTATATGCTGCCCGTTTCTC
58.582
52.381
0.00
0.00
0.00
2.87
88
89
2.037772
CCTATATGCTGCCCGTTTCTCT
59.962
50.000
0.00
0.00
0.00
3.10
89
90
3.258372
CCTATATGCTGCCCGTTTCTCTA
59.742
47.826
0.00
0.00
0.00
2.43
90
91
2.596904
TATGCTGCCCGTTTCTCTAC
57.403
50.000
0.00
0.00
0.00
2.59
91
92
0.905357
ATGCTGCCCGTTTCTCTACT
59.095
50.000
0.00
0.00
0.00
2.57
92
93
0.037326
TGCTGCCCGTTTCTCTACTG
60.037
55.000
0.00
0.00
0.00
2.74
93
94
0.246635
GCTGCCCGTTTCTCTACTGA
59.753
55.000
0.00
0.00
0.00
3.41
94
95
1.337823
GCTGCCCGTTTCTCTACTGAA
60.338
52.381
0.00
0.00
0.00
3.02
95
96
2.611518
CTGCCCGTTTCTCTACTGAAG
58.388
52.381
0.00
0.00
0.00
3.02
96
97
1.275291
TGCCCGTTTCTCTACTGAAGG
59.725
52.381
0.00
0.00
0.00
3.46
97
98
2.007547
GCCCGTTTCTCTACTGAAGGC
61.008
57.143
0.00
0.00
31.09
4.35
98
99
1.405661
CCCGTTTCTCTACTGAAGGCC
60.406
57.143
0.00
0.00
0.00
5.19
99
100
1.405661
CCGTTTCTCTACTGAAGGCCC
60.406
57.143
0.00
0.00
0.00
5.80
100
101
1.275291
CGTTTCTCTACTGAAGGCCCA
59.725
52.381
0.00
0.00
0.00
5.36
101
102
2.701107
GTTTCTCTACTGAAGGCCCAC
58.299
52.381
0.00
0.00
0.00
4.61
102
103
0.895530
TTCTCTACTGAAGGCCCACG
59.104
55.000
0.00
0.00
0.00
4.94
103
104
0.039180
TCTCTACTGAAGGCCCACGA
59.961
55.000
0.00
0.00
0.00
4.35
104
105
0.895530
CTCTACTGAAGGCCCACGAA
59.104
55.000
0.00
0.00
0.00
3.85
105
106
0.895530
TCTACTGAAGGCCCACGAAG
59.104
55.000
0.00
0.00
0.00
3.79
106
107
0.108138
CTACTGAAGGCCCACGAAGG
60.108
60.000
0.00
0.00
37.03
3.46
107
108
0.543410
TACTGAAGGCCCACGAAGGA
60.543
55.000
0.00
0.00
41.22
3.36
108
109
1.201429
ACTGAAGGCCCACGAAGGAT
61.201
55.000
0.00
0.00
41.22
3.24
109
110
0.830648
CTGAAGGCCCACGAAGGATA
59.169
55.000
0.00
0.00
41.22
2.59
110
111
1.417890
CTGAAGGCCCACGAAGGATAT
59.582
52.381
0.00
0.00
41.22
1.63
111
112
1.140852
TGAAGGCCCACGAAGGATATG
59.859
52.381
0.00
0.00
41.22
1.78
112
113
0.179018
AAGGCCCACGAAGGATATGC
60.179
55.000
0.00
0.00
41.22
3.14
113
114
1.056700
AGGCCCACGAAGGATATGCT
61.057
55.000
0.00
0.00
41.22
3.79
114
115
0.886490
GGCCCACGAAGGATATGCTG
60.886
60.000
0.00
0.00
41.22
4.41
115
116
1.510480
GCCCACGAAGGATATGCTGC
61.510
60.000
0.00
0.00
41.22
5.25
116
117
0.886490
CCCACGAAGGATATGCTGCC
60.886
60.000
0.00
0.00
41.22
4.85
117
118
0.886490
CCACGAAGGATATGCTGCCC
60.886
60.000
0.00
0.00
41.22
5.36
118
119
0.179048
CACGAAGGATATGCTGCCCA
60.179
55.000
0.00
0.00
0.00
5.36
119
120
0.767375
ACGAAGGATATGCTGCCCAT
59.233
50.000
0.00
0.00
37.97
4.00
120
121
1.162698
CGAAGGATATGCTGCCCATG
58.837
55.000
0.00
0.00
35.34
3.66
121
122
1.544093
CGAAGGATATGCTGCCCATGT
60.544
52.381
0.00
0.00
35.34
3.21
122
123
2.289631
CGAAGGATATGCTGCCCATGTA
60.290
50.000
0.00
0.00
35.34
2.29
123
124
3.341823
GAAGGATATGCTGCCCATGTAG
58.658
50.000
0.00
0.00
35.34
2.74
131
132
1.678101
GCTGCCCATGTAGCTTTTAGG
59.322
52.381
0.00
0.00
45.63
2.69
132
133
1.678101
CTGCCCATGTAGCTTTTAGGC
59.322
52.381
0.00
0.00
39.41
3.93
133
134
1.032794
GCCCATGTAGCTTTTAGGCC
58.967
55.000
0.00
0.00
32.68
5.19
134
135
1.692411
CCCATGTAGCTTTTAGGCCC
58.308
55.000
0.00
0.00
0.00
5.80
135
136
1.308998
CCATGTAGCTTTTAGGCCCG
58.691
55.000
0.00
0.00
0.00
6.13
136
137
1.308998
CATGTAGCTTTTAGGCCCGG
58.691
55.000
0.00
0.00
0.00
5.73
137
138
0.916809
ATGTAGCTTTTAGGCCCGGT
59.083
50.000
0.00
0.00
0.00
5.28
138
139
0.035820
TGTAGCTTTTAGGCCCGGTG
60.036
55.000
0.00
0.00
0.00
4.94
139
140
0.251073
GTAGCTTTTAGGCCCGGTGA
59.749
55.000
0.00
0.00
0.00
4.02
140
141
0.251073
TAGCTTTTAGGCCCGGTGAC
59.749
55.000
0.00
0.00
0.00
3.67
141
142
1.302993
GCTTTTAGGCCCGGTGACA
60.303
57.895
0.00
0.00
0.00
3.58
142
143
0.891904
GCTTTTAGGCCCGGTGACAA
60.892
55.000
0.00
0.00
0.00
3.18
143
144
1.611519
CTTTTAGGCCCGGTGACAAA
58.388
50.000
0.00
0.00
0.00
2.83
144
145
1.268625
CTTTTAGGCCCGGTGACAAAC
59.731
52.381
0.00
0.00
0.00
2.93
145
146
0.183014
TTTAGGCCCGGTGACAAACA
59.817
50.000
0.00
0.00
0.00
2.83
146
147
0.402504
TTAGGCCCGGTGACAAACAT
59.597
50.000
0.00
0.00
0.00
2.71
147
148
0.322098
TAGGCCCGGTGACAAACATG
60.322
55.000
0.00
0.00
0.00
3.21
148
149
1.602323
GGCCCGGTGACAAACATGA
60.602
57.895
0.00
0.00
0.00
3.07
149
150
1.586154
GGCCCGGTGACAAACATGAG
61.586
60.000
0.00
0.00
0.00
2.90
150
151
0.605319
GCCCGGTGACAAACATGAGA
60.605
55.000
0.00
0.00
0.00
3.27
151
152
1.890876
CCCGGTGACAAACATGAGAA
58.109
50.000
0.00
0.00
0.00
2.87
152
153
2.226330
CCCGGTGACAAACATGAGAAA
58.774
47.619
0.00
0.00
0.00
2.52
153
154
2.819608
CCCGGTGACAAACATGAGAAAT
59.180
45.455
0.00
0.00
0.00
2.17
154
155
3.366273
CCCGGTGACAAACATGAGAAATG
60.366
47.826
0.00
0.00
0.00
2.32
155
156
3.366273
CCGGTGACAAACATGAGAAATGG
60.366
47.826
0.00
0.00
0.00
3.16
156
157
3.366273
CGGTGACAAACATGAGAAATGGG
60.366
47.826
0.00
0.00
0.00
4.00
157
158
3.826157
GGTGACAAACATGAGAAATGGGA
59.174
43.478
0.00
0.00
0.00
4.37
158
159
4.321230
GGTGACAAACATGAGAAATGGGAC
60.321
45.833
0.00
0.00
0.00
4.46
170
171
2.861730
TGGGACAGGCCTCTGAGA
59.138
61.111
0.00
0.00
43.49
3.27
171
172
1.305633
TGGGACAGGCCTCTGAGAG
60.306
63.158
0.00
1.57
43.49
3.20
172
173
1.000993
GGGACAGGCCTCTGAGAGA
59.999
63.158
11.82
0.00
43.49
3.10
173
174
0.616111
GGGACAGGCCTCTGAGAGAA
60.616
60.000
11.82
0.00
43.49
2.87
174
175
0.534873
GGACAGGCCTCTGAGAGAAC
59.465
60.000
11.82
3.08
43.49
3.01
175
176
0.172352
GACAGGCCTCTGAGAGAACG
59.828
60.000
11.82
0.00
43.49
3.95
176
177
1.153667
CAGGCCTCTGAGAGAACGC
60.154
63.158
11.82
5.83
43.49
4.84
177
178
1.607756
AGGCCTCTGAGAGAACGCA
60.608
57.895
11.82
0.00
0.00
5.24
178
179
1.188219
AGGCCTCTGAGAGAACGCAA
61.188
55.000
11.82
0.00
0.00
4.85
179
180
0.320771
GGCCTCTGAGAGAACGCAAA
60.321
55.000
11.82
0.00
0.00
3.68
180
181
0.793250
GCCTCTGAGAGAACGCAAAC
59.207
55.000
11.82
0.00
0.00
2.93
182
183
0.436531
CTCTGAGAGAACGCAAACGC
59.563
55.000
2.60
0.00
45.53
4.84
255
256
2.105466
GCTGCCGAGGCTTCTTCTG
61.105
63.158
15.75
0.00
42.51
3.02
267
268
2.046023
CTTCTGCCCGTCATGCCA
60.046
61.111
0.00
0.00
0.00
4.92
289
290
0.390860
GCCACTGATATGCGTCTCCT
59.609
55.000
0.00
0.00
0.00
3.69
297
298
0.178987
TATGCGTCTCCTCCTCCTCC
60.179
60.000
0.00
0.00
0.00
4.30
307
308
1.127343
CTCCTCCTCCCCATCTTCAC
58.873
60.000
0.00
0.00
0.00
3.18
314
315
2.892425
CCCATCTTCACGCCTCGC
60.892
66.667
0.00
0.00
0.00
5.03
331
1058
2.096406
CGCCTGCGTTCAACATCG
59.904
61.111
2.83
0.00
34.35
3.84
377
1111
1.531578
GAGGTCGAAAGCCAAGTCAAC
59.468
52.381
0.00
0.00
0.00
3.18
380
1114
0.181587
TCGAAAGCCAAGTCAACCCA
59.818
50.000
0.00
0.00
0.00
4.51
470
1216
5.428253
TGCGAGAATTTCCTAGCATACTTT
58.572
37.500
6.86
0.00
39.31
2.66
481
1227
5.104652
TCCTAGCATACTTTCTGTTAACCCC
60.105
44.000
2.48
0.00
0.00
4.95
525
1271
5.220453
GCTCACCAATTTCAGTTTTGTTGTG
60.220
40.000
0.00
0.00
0.00
3.33
527
1273
4.934602
CACCAATTTCAGTTTTGTTGTGGT
59.065
37.500
0.00
0.00
37.32
4.16
528
1274
5.411053
CACCAATTTCAGTTTTGTTGTGGTT
59.589
36.000
0.00
0.00
34.67
3.67
529
1275
5.411053
ACCAATTTCAGTTTTGTTGTGGTTG
59.589
36.000
0.00
0.00
33.06
3.77
532
1278
4.855715
TTCAGTTTTGTTGTGGTTGTGA
57.144
36.364
0.00
0.00
0.00
3.58
533
1279
4.855715
TCAGTTTTGTTGTGGTTGTGAA
57.144
36.364
0.00
0.00
0.00
3.18
534
1280
4.804108
TCAGTTTTGTTGTGGTTGTGAAG
58.196
39.130
0.00
0.00
0.00
3.02
546
1307
3.054287
TGGTTGTGAAGTGTGAACCCTTA
60.054
43.478
0.00
0.00
37.63
2.69
588
1349
4.385825
TGTACTTGTGAACCCTTGCTTAG
58.614
43.478
0.00
0.00
0.00
2.18
654
1415
1.723608
TTTGACTGGTTGCCGTGCAG
61.724
55.000
0.00
0.00
40.61
4.41
665
1426
2.425592
CGTGCAGGTCCAAGTCCA
59.574
61.111
0.00
0.00
0.00
4.02
680
1441
2.271821
CCACGGATCCACATGGCA
59.728
61.111
13.41
0.00
34.44
4.92
744
1505
1.305930
GCAAATCGGGACAGGTGACC
61.306
60.000
0.00
0.00
0.00
4.02
782
1546
2.636647
TGATTCAGTCAGGCAACACA
57.363
45.000
0.00
0.00
41.41
3.72
850
1618
3.680786
CACCACGGAGACCTCGCA
61.681
66.667
0.00
0.00
0.00
5.10
866
1634
0.859232
CGCAGTCTTGTGTACACACC
59.141
55.000
27.91
17.80
45.88
4.16
885
1656
3.881688
CACCTGCCTTTCCTATCAATCAG
59.118
47.826
0.00
0.00
0.00
2.90
1005
1781
0.739462
TACCTCGCACATTTGAGCCG
60.739
55.000
0.00
0.00
0.00
5.52
1109
1915
6.423182
TCCCTGTTTTTATCCTCCTGTTATG
58.577
40.000
0.00
0.00
0.00
1.90
1119
1925
4.934356
TCCTCCTGTTATGGATTTGCTTT
58.066
39.130
0.00
0.00
35.30
3.51
1199
2008
3.499338
TCTCAAATGGTGGCATCTTTGT
58.501
40.909
16.70
1.01
31.98
2.83
1336
2147
1.950954
GCAGCTCCCCTGGTAAGTTTC
60.951
57.143
0.00
0.00
42.03
2.78
1338
2149
1.909986
AGCTCCCCTGGTAAGTTTCTC
59.090
52.381
0.00
0.00
0.00
2.87
1707
2536
0.248336
CTGCGCTCGACGGTGTATTA
60.248
55.000
9.73
0.00
43.93
0.98
1731
2564
2.229675
TCGCCATGTATCAGAGCAAG
57.770
50.000
0.00
0.00
0.00
4.01
1761
2594
4.247258
CCATCATGTCCCAAACAATTGTG
58.753
43.478
12.82
0.00
42.37
3.33
1871
2704
3.052082
CCTGGCGTGGAACAGCAG
61.052
66.667
0.00
0.00
41.80
4.24
2008
2841
4.513442
CCTCGATGGATTTGAACCTGTTA
58.487
43.478
0.00
0.00
38.35
2.41
2137
2970
5.809001
ACATCAGGAATAGAAGCTTTGACA
58.191
37.500
0.00
0.00
0.00
3.58
2350
3197
2.496871
TCATTGCCCACCTTATTGCTTG
59.503
45.455
0.00
0.00
0.00
4.01
2377
3231
3.555956
GTGTGATGGATTGCCTACTAACG
59.444
47.826
0.00
0.00
34.31
3.18
2475
3344
7.544566
CGGTAGTTACAGTTATGTTCAGTTGAT
59.455
37.037
0.00
0.00
41.01
2.57
2496
3366
2.030893
TCTTTCTTCCGCATTTGTGCTG
60.031
45.455
0.00
0.00
0.00
4.41
2620
3516
1.938585
TACCTGGTCTGTTCTCCCTG
58.061
55.000
0.63
0.00
0.00
4.45
2646
3542
3.002246
TGCATCAAAGTCAGACGTGTTTC
59.998
43.478
0.00
0.00
0.00
2.78
2690
3587
6.985188
TCCTATAAGTTGCAACATCTTCAC
57.015
37.500
30.11
2.25
0.00
3.18
2701
3598
4.790766
GCAACATCTTCACCAGTGTTTCTG
60.791
45.833
0.00
0.00
43.27
3.02
2717
3624
8.971321
CAGTGTTTCTGAATTTTACCATTTCAG
58.029
33.333
5.72
5.72
46.27
3.02
2725
3632
9.643693
CTGAATTTTACCATTTCAGCTGTAAAT
57.356
29.630
14.67
14.59
39.73
1.40
2903
4094
9.968870
CTTCAATCTACCCTTGTATAGTAAGTC
57.031
37.037
0.00
0.00
0.00
3.01
3033
4267
1.423395
CAAGTCGAGAGGTTGAGCAC
58.577
55.000
0.00
0.00
0.00
4.40
3047
4281
5.415701
AGGTTGAGCACGATTCAATTATGTT
59.584
36.000
0.00
0.00
36.96
2.71
3084
4318
8.640651
TGCCATGTTAATGCATTAGTGATTAAT
58.359
29.630
18.13
4.56
31.93
1.40
3143
4386
3.157727
GGCACCCATGAATTTTGCC
57.842
52.632
0.00
0.59
45.64
4.52
3147
4390
2.616001
GCACCCATGAATTTTGCCATGT
60.616
45.455
0.00
0.00
38.69
3.21
3168
4411
3.319122
GTCAGAACAACTGGGCAATTCTT
59.681
43.478
0.00
0.00
45.76
2.52
3225
4475
7.611079
TGTGGATTAACTTCAATGACATCATCA
59.389
33.333
0.00
0.00
43.13
3.07
3315
4569
7.065803
AGGTAACATTTCACTTGGACGATTATG
59.934
37.037
0.00
0.00
41.41
1.90
3434
4695
6.830324
CCAAGTATTCTGATCAAGGAATGGAA
59.170
38.462
16.55
7.01
34.52
3.53
3715
4976
1.892474
GCTTGATTGGCCAACAAGGTA
59.108
47.619
35.60
15.56
43.48
3.08
3924
5185
5.909621
TGTTGGGACATAGTGAGTAGTAC
57.090
43.478
0.00
0.00
39.30
2.73
3930
5191
5.072872
GGGACATAGTGAGTAGTACCTCCTA
59.927
48.000
0.00
0.00
32.06
2.94
3938
5207
6.098695
AGTGAGTAGTACCTCCTACACTAGAG
59.901
46.154
0.00
0.00
39.84
2.43
4004
6127
3.523606
TTGTGCACTTGCTTGTGAAAT
57.476
38.095
19.41
0.00
42.66
2.17
4129
6257
1.338105
TGGGTTGAAGATCAGCTCACG
60.338
52.381
0.00
0.00
33.02
4.35
4134
6262
0.820871
GAAGATCAGCTCACGTCCCT
59.179
55.000
0.00
0.00
0.00
4.20
4145
6285
3.821600
GCTCACGTCCCTATCTTATGAGA
59.178
47.826
2.63
0.00
35.22
3.27
4154
6294
4.461081
CCCTATCTTATGAGAGACTTCCCG
59.539
50.000
2.00
0.00
33.66
5.14
4181
6321
8.478775
ACCTCATAGATTATGTAAGTGCTACA
57.521
34.615
0.00
0.00
44.65
2.74
4192
6332
6.458232
TGTAAGTGCTACAAAACCAAATGT
57.542
33.333
0.00
0.00
37.58
2.71
4198
6338
5.173131
GTGCTACAAAACCAAATGTTTCGAG
59.827
40.000
0.00
0.00
46.39
4.04
4203
6343
6.159988
ACAAAACCAAATGTTTCGAGTTTGA
58.840
32.000
12.99
0.00
46.39
2.69
4228
6395
5.347342
CAACTCAAGTACAACATGGCAAAA
58.653
37.500
0.00
0.00
0.00
2.44
4230
6404
5.348164
ACTCAAGTACAACATGGCAAAAAC
58.652
37.500
0.00
0.00
0.00
2.43
4232
6406
5.724328
TCAAGTACAACATGGCAAAAACAA
58.276
33.333
0.00
0.00
0.00
2.83
4267
6444
1.617804
CCCATCACCATGTTTCAGGCT
60.618
52.381
0.00
0.00
0.00
4.58
4338
6515
2.473816
TCTGAAGAGTTGTTCACTGCG
58.526
47.619
0.00
0.00
35.01
5.18
4348
6525
1.286501
GTTCACTGCGTCAAGTGTCA
58.713
50.000
12.63
2.06
46.33
3.58
4684
6877
3.818787
CAGGTGGCGCTCCAATGC
61.819
66.667
20.23
0.00
45.53
3.56
4685
6878
4.349503
AGGTGGCGCTCCAATGCA
62.350
61.111
20.23
0.00
45.53
3.96
4686
6879
3.372730
GGTGGCGCTCCAATGCAA
61.373
61.111
7.64
0.00
45.53
4.08
4687
6880
2.180017
GTGGCGCTCCAATGCAAG
59.820
61.111
7.64
0.00
45.53
4.01
4691
6884
4.183686
CGCTCCAATGCAAGCCGG
62.184
66.667
0.00
0.00
35.00
6.13
4694
6887
1.312371
GCTCCAATGCAAGCCGGTTA
61.312
55.000
1.90
0.00
32.22
2.85
4709
6902
3.828786
CCGGTTAAAATTACTGGTGTGC
58.171
45.455
0.00
0.00
37.29
4.57
4711
6904
4.472286
CGGTTAAAATTACTGGTGTGCTG
58.528
43.478
0.00
0.00
0.00
4.41
4712
6905
4.214545
CGGTTAAAATTACTGGTGTGCTGA
59.785
41.667
0.00
0.00
0.00
4.26
4714
6907
5.009210
GGTTAAAATTACTGGTGTGCTGACA
59.991
40.000
0.00
0.00
0.00
3.58
4766
6959
2.030540
GCTCAAATGCAACTGAAGCTGA
60.031
45.455
0.00
0.00
0.00
4.26
4769
6962
3.633525
TCAAATGCAACTGAAGCTGAACT
59.366
39.130
0.00
0.00
0.00
3.01
4831
7024
2.906897
CACACGCACCCAGCCTTT
60.907
61.111
0.00
0.00
41.38
3.11
4832
7025
2.906897
ACACGCACCCAGCCTTTG
60.907
61.111
0.00
0.00
41.38
2.77
4833
7026
4.347453
CACGCACCCAGCCTTTGC
62.347
66.667
0.00
0.00
41.38
3.68
4845
7038
2.643933
GCCTTTGCTGGAAACTGATC
57.356
50.000
0.00
0.00
33.53
2.92
4846
7039
1.135575
GCCTTTGCTGGAAACTGATCG
60.136
52.381
0.00
0.00
33.53
3.69
4847
7040
1.135575
CCTTTGCTGGAAACTGATCGC
60.136
52.381
0.00
0.00
0.00
4.58
4848
7041
1.808945
CTTTGCTGGAAACTGATCGCT
59.191
47.619
0.00
0.00
0.00
4.93
4849
7042
1.442769
TTGCTGGAAACTGATCGCTC
58.557
50.000
0.00
0.00
0.00
5.03
4850
7043
0.610174
TGCTGGAAACTGATCGCTCT
59.390
50.000
0.00
0.00
0.00
4.09
4851
7044
1.002430
TGCTGGAAACTGATCGCTCTT
59.998
47.619
0.00
0.00
0.00
2.85
4863
7056
2.370281
TCGCTCTTCTGATGTCCAAC
57.630
50.000
0.00
0.00
0.00
3.77
4877
7070
2.225091
TGTCCAACCCATTCTCTTGCAT
60.225
45.455
0.00
0.00
0.00
3.96
4893
7086
3.793797
TGCATGCTGAAAATCCATCAG
57.206
42.857
20.33
0.00
45.65
2.90
4898
7091
5.291128
GCATGCTGAAAATCCATCAGAAAAG
59.709
40.000
11.37
0.00
45.74
2.27
4916
7109
1.076438
AGGGTCAAAAGGGAGGGAAG
58.924
55.000
0.00
0.00
0.00
3.46
4923
7116
0.103337
AAAGGGAGGGAAGGGAGGTT
60.103
55.000
0.00
0.00
0.00
3.50
4926
7119
2.231380
GGAGGGAAGGGAGGTTGCA
61.231
63.158
0.00
0.00
0.00
4.08
4931
7124
1.177401
GGAAGGGAGGTTGCACATTC
58.823
55.000
0.00
0.00
0.00
2.67
4938
7131
2.076863
GAGGTTGCACATTCGTTAGCT
58.923
47.619
0.00
0.00
0.00
3.32
4954
7160
5.358725
TCGTTAGCTATCCGAATATATGCCA
59.641
40.000
12.14
0.00
0.00
4.92
4957
7163
8.029522
CGTTAGCTATCCGAATATATGCCATAT
58.970
37.037
2.25
2.25
0.00
1.78
4959
7165
6.705302
AGCTATCCGAATATATGCCATATGG
58.295
40.000
18.07
18.07
38.53
2.74
4975
7181
7.669427
TGCCATATGGAAAATATTTCATGACC
58.331
34.615
26.47
1.65
35.47
4.02
5087
7293
9.793252
AAAAGCTCACATGCAACTATAATTTAG
57.207
29.630
0.00
0.00
34.99
1.85
5088
7294
6.963796
AGCTCACATGCAACTATAATTTAGC
58.036
36.000
0.00
0.00
34.99
3.09
5089
7295
6.016777
AGCTCACATGCAACTATAATTTAGCC
60.017
38.462
0.00
0.00
34.99
3.93
5090
7296
6.238731
GCTCACATGCAACTATAATTTAGCCA
60.239
38.462
0.00
0.00
0.00
4.75
5091
7297
7.522725
GCTCACATGCAACTATAATTTAGCCAT
60.523
37.037
0.00
0.00
0.00
4.40
5092
7298
7.650890
TCACATGCAACTATAATTTAGCCATG
58.349
34.615
0.00
0.00
0.00
3.66
5093
7299
6.364165
CACATGCAACTATAATTTAGCCATGC
59.636
38.462
0.00
0.00
0.00
4.06
5094
7300
5.107109
TGCAACTATAATTTAGCCATGCG
57.893
39.130
0.00
0.00
34.16
4.73
5095
7301
4.023279
TGCAACTATAATTTAGCCATGCGG
60.023
41.667
0.00
0.00
34.16
5.69
5096
7302
4.215399
GCAACTATAATTTAGCCATGCGGA
59.785
41.667
0.00
0.00
0.00
5.54
5097
7303
5.278266
GCAACTATAATTTAGCCATGCGGAA
60.278
40.000
0.00
0.00
0.00
4.30
5098
7304
6.373779
CAACTATAATTTAGCCATGCGGAAG
58.626
40.000
0.00
0.00
0.00
3.46
5099
7305
5.865085
ACTATAATTTAGCCATGCGGAAGA
58.135
37.500
0.00
0.00
0.00
2.87
5100
7306
6.296026
ACTATAATTTAGCCATGCGGAAGAA
58.704
36.000
0.00
0.00
0.00
2.52
5101
7307
6.942576
ACTATAATTTAGCCATGCGGAAGAAT
59.057
34.615
0.00
0.00
0.00
2.40
5102
7308
4.574599
AATTTAGCCATGCGGAAGAATC
57.425
40.909
0.00
0.00
0.00
2.52
5103
7309
2.708216
TTAGCCATGCGGAAGAATCA
57.292
45.000
0.00
0.00
0.00
2.57
5104
7310
2.936919
TAGCCATGCGGAAGAATCAT
57.063
45.000
0.00
0.00
0.00
2.45
5105
7311
2.062971
AGCCATGCGGAAGAATCATT
57.937
45.000
0.00
0.00
0.00
2.57
5106
7312
1.679680
AGCCATGCGGAAGAATCATTG
59.320
47.619
0.00
0.00
0.00
2.82
5107
7313
1.406539
GCCATGCGGAAGAATCATTGT
59.593
47.619
0.00
0.00
0.00
2.71
5108
7314
2.542411
GCCATGCGGAAGAATCATTGTC
60.542
50.000
0.00
0.00
0.00
3.18
5109
7315
2.286595
CCATGCGGAAGAATCATTGTCG
60.287
50.000
0.00
0.00
0.00
4.35
5110
7316
2.093306
TGCGGAAGAATCATTGTCGT
57.907
45.000
0.00
0.00
0.00
4.34
5111
7317
1.731709
TGCGGAAGAATCATTGTCGTG
59.268
47.619
0.00
0.00
0.00
4.35
5112
7318
1.999735
GCGGAAGAATCATTGTCGTGA
59.000
47.619
0.00
0.00
0.00
4.35
5113
7319
2.222819
GCGGAAGAATCATTGTCGTGAC
60.223
50.000
0.00
0.00
0.00
3.67
5114
7320
2.348666
CGGAAGAATCATTGTCGTGACC
59.651
50.000
0.00
0.00
0.00
4.02
5115
7321
3.600388
GGAAGAATCATTGTCGTGACCT
58.400
45.455
0.00
0.00
0.00
3.85
5116
7322
4.003648
GGAAGAATCATTGTCGTGACCTT
58.996
43.478
0.00
0.00
31.32
3.50
5117
7323
4.142816
GGAAGAATCATTGTCGTGACCTTG
60.143
45.833
0.00
0.00
29.85
3.61
5118
7324
4.271696
AGAATCATTGTCGTGACCTTGA
57.728
40.909
0.00
1.49
0.00
3.02
5119
7325
3.997021
AGAATCATTGTCGTGACCTTGAC
59.003
43.478
0.00
0.00
35.67
3.18
5120
7326
2.163818
TCATTGTCGTGACCTTGACC
57.836
50.000
0.00
0.00
34.18
4.02
5121
7327
1.414550
TCATTGTCGTGACCTTGACCA
59.585
47.619
0.00
0.00
34.18
4.02
5122
7328
2.158885
TCATTGTCGTGACCTTGACCAA
60.159
45.455
0.00
0.00
34.18
3.67
5123
7329
2.404923
TTGTCGTGACCTTGACCAAA
57.595
45.000
0.00
0.00
34.18
3.28
5124
7330
2.404923
TGTCGTGACCTTGACCAAAA
57.595
45.000
0.00
0.00
34.18
2.44
5125
7331
2.712709
TGTCGTGACCTTGACCAAAAA
58.287
42.857
0.00
0.00
34.18
1.94
5238
7444
5.488341
GAAGCCCAGTTACAGATGTAAGAA
58.512
41.667
5.68
0.00
40.74
2.52
5243
7449
6.430000
GCCCAGTTACAGATGTAAGAAAGAAA
59.570
38.462
5.68
0.00
40.74
2.52
5282
7492
3.244422
ACATGGGACTACTCGCAAAAGAA
60.244
43.478
0.00
0.00
42.26
2.52
5532
7743
1.283321
GAGGAGGAGAAGGCAAACCAT
59.717
52.381
0.00
0.00
39.06
3.55
5565
7776
3.616560
CGAAAGGGCACTTTAGCAGTAGA
60.617
47.826
15.39
0.00
46.51
2.59
5727
7938
0.325933
CATCCCAGACCTTGTGCAGA
59.674
55.000
0.00
0.00
0.00
4.26
5728
7939
0.326264
ATCCCAGACCTTGTGCAGAC
59.674
55.000
0.00
0.00
0.00
3.51
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
0
1
3.550678
GTCGGGAGCAACTAATTAACGAG
59.449
47.826
0.00
0.00
0.00
4.18
1
2
3.056678
TGTCGGGAGCAACTAATTAACGA
60.057
43.478
0.00
0.00
0.00
3.85
2
3
3.255725
TGTCGGGAGCAACTAATTAACG
58.744
45.455
0.00
0.00
0.00
3.18
3
4
4.501071
TCTGTCGGGAGCAACTAATTAAC
58.499
43.478
0.00
0.00
0.00
2.01
4
5
4.811969
TCTGTCGGGAGCAACTAATTAA
57.188
40.909
0.00
0.00
0.00
1.40
5
6
4.161565
ACATCTGTCGGGAGCAACTAATTA
59.838
41.667
0.00
0.00
0.00
1.40
6
7
3.055094
ACATCTGTCGGGAGCAACTAATT
60.055
43.478
0.00
0.00
0.00
1.40
7
8
2.501723
ACATCTGTCGGGAGCAACTAAT
59.498
45.455
0.00
0.00
0.00
1.73
9
10
1.476891
GACATCTGTCGGGAGCAACTA
59.523
52.381
0.00
0.00
35.12
2.24
10
11
0.247736
GACATCTGTCGGGAGCAACT
59.752
55.000
0.00
0.00
35.12
3.16
11
12
2.755929
GACATCTGTCGGGAGCAAC
58.244
57.895
0.00
0.00
35.12
4.17
40
41
4.835615
TCTTGCATTTGCTACCCCTAAAAA
59.164
37.500
3.94
0.00
42.66
1.94
41
42
4.411927
TCTTGCATTTGCTACCCCTAAAA
58.588
39.130
3.94
0.00
42.66
1.52
42
43
4.016444
CTCTTGCATTTGCTACCCCTAAA
58.984
43.478
3.94
0.00
42.66
1.85
43
44
3.265737
TCTCTTGCATTTGCTACCCCTAA
59.734
43.478
3.94
0.00
42.66
2.69
44
45
2.843730
TCTCTTGCATTTGCTACCCCTA
59.156
45.455
3.94
0.00
42.66
3.53
45
46
1.635487
TCTCTTGCATTTGCTACCCCT
59.365
47.619
3.94
0.00
42.66
4.79
46
47
2.019984
CTCTCTTGCATTTGCTACCCC
58.980
52.381
3.94
0.00
42.66
4.95
47
48
1.403323
GCTCTCTTGCATTTGCTACCC
59.597
52.381
3.94
0.00
42.66
3.69
48
49
1.403323
GGCTCTCTTGCATTTGCTACC
59.597
52.381
3.94
0.00
42.66
3.18
49
50
2.363683
AGGCTCTCTTGCATTTGCTAC
58.636
47.619
3.94
0.00
42.66
3.58
50
51
2.795231
AGGCTCTCTTGCATTTGCTA
57.205
45.000
3.94
0.00
42.66
3.49
51
52
2.795231
TAGGCTCTCTTGCATTTGCT
57.205
45.000
3.94
0.00
42.66
3.91
52
53
4.615452
GCATATAGGCTCTCTTGCATTTGC
60.615
45.833
1.25
0.00
42.50
3.68
53
54
4.760715
AGCATATAGGCTCTCTTGCATTTG
59.239
41.667
5.96
0.00
41.05
2.32
54
55
4.760715
CAGCATATAGGCTCTCTTGCATTT
59.239
41.667
9.34
0.00
43.68
2.32
55
56
4.325119
CAGCATATAGGCTCTCTTGCATT
58.675
43.478
9.34
0.00
43.68
3.56
56
57
3.869140
GCAGCATATAGGCTCTCTTGCAT
60.869
47.826
9.34
0.00
43.68
3.96
57
58
2.549563
GCAGCATATAGGCTCTCTTGCA
60.550
50.000
9.34
0.00
43.68
4.08
58
59
2.075338
GCAGCATATAGGCTCTCTTGC
58.925
52.381
9.34
6.85
43.68
4.01
59
60
2.614987
GGGCAGCATATAGGCTCTCTTG
60.615
54.545
9.34
0.00
43.68
3.02
60
61
1.627834
GGGCAGCATATAGGCTCTCTT
59.372
52.381
9.34
0.00
43.68
2.85
61
62
1.274712
GGGCAGCATATAGGCTCTCT
58.725
55.000
9.34
0.00
43.68
3.10
62
63
0.108424
CGGGCAGCATATAGGCTCTC
60.108
60.000
9.34
4.34
43.68
3.20
63
64
0.833834
ACGGGCAGCATATAGGCTCT
60.834
55.000
9.34
0.00
43.68
4.09
64
65
0.035458
AACGGGCAGCATATAGGCTC
59.965
55.000
9.34
4.73
43.68
4.70
66
67
0.875059
GAAACGGGCAGCATATAGGC
59.125
55.000
0.00
0.00
0.00
3.93
67
68
2.037772
AGAGAAACGGGCAGCATATAGG
59.962
50.000
0.00
0.00
0.00
2.57
68
69
3.393089
AGAGAAACGGGCAGCATATAG
57.607
47.619
0.00
0.00
0.00
1.31
69
70
3.895656
AGTAGAGAAACGGGCAGCATATA
59.104
43.478
0.00
0.00
0.00
0.86
70
71
2.700897
AGTAGAGAAACGGGCAGCATAT
59.299
45.455
0.00
0.00
0.00
1.78
71
72
2.108168
AGTAGAGAAACGGGCAGCATA
58.892
47.619
0.00
0.00
0.00
3.14
72
73
0.905357
AGTAGAGAAACGGGCAGCAT
59.095
50.000
0.00
0.00
0.00
3.79
73
74
0.037326
CAGTAGAGAAACGGGCAGCA
60.037
55.000
0.00
0.00
0.00
4.41
74
75
0.246635
TCAGTAGAGAAACGGGCAGC
59.753
55.000
0.00
0.00
0.00
5.25
75
76
2.611518
CTTCAGTAGAGAAACGGGCAG
58.388
52.381
0.00
0.00
0.00
4.85
76
77
1.275291
CCTTCAGTAGAGAAACGGGCA
59.725
52.381
0.00
0.00
0.00
5.36
77
78
2.007547
GCCTTCAGTAGAGAAACGGGC
61.008
57.143
0.00
0.00
0.00
6.13
78
79
1.405661
GGCCTTCAGTAGAGAAACGGG
60.406
57.143
0.00
0.00
0.00
5.28
79
80
1.405661
GGGCCTTCAGTAGAGAAACGG
60.406
57.143
0.84
0.00
0.00
4.44
80
81
1.275291
TGGGCCTTCAGTAGAGAAACG
59.725
52.381
4.53
0.00
0.00
3.60
81
82
2.701107
GTGGGCCTTCAGTAGAGAAAC
58.299
52.381
4.53
0.00
0.00
2.78
82
83
1.275291
CGTGGGCCTTCAGTAGAGAAA
59.725
52.381
4.53
0.00
0.00
2.52
83
84
0.895530
CGTGGGCCTTCAGTAGAGAA
59.104
55.000
4.53
0.00
0.00
2.87
84
85
0.039180
TCGTGGGCCTTCAGTAGAGA
59.961
55.000
4.53
0.00
0.00
3.10
85
86
0.895530
TTCGTGGGCCTTCAGTAGAG
59.104
55.000
4.53
0.00
0.00
2.43
86
87
0.895530
CTTCGTGGGCCTTCAGTAGA
59.104
55.000
4.53
0.00
0.00
2.59
87
88
0.108138
CCTTCGTGGGCCTTCAGTAG
60.108
60.000
4.53
0.00
0.00
2.57
88
89
0.543410
TCCTTCGTGGGCCTTCAGTA
60.543
55.000
4.53
0.00
36.20
2.74
89
90
1.201429
ATCCTTCGTGGGCCTTCAGT
61.201
55.000
4.53
0.00
36.20
3.41
90
91
0.830648
TATCCTTCGTGGGCCTTCAG
59.169
55.000
4.53
0.00
36.20
3.02
91
92
1.140852
CATATCCTTCGTGGGCCTTCA
59.859
52.381
4.53
0.00
36.20
3.02
92
93
1.884235
CATATCCTTCGTGGGCCTTC
58.116
55.000
4.53
0.00
36.20
3.46
93
94
0.179018
GCATATCCTTCGTGGGCCTT
60.179
55.000
4.53
0.00
36.20
4.35
94
95
1.056700
AGCATATCCTTCGTGGGCCT
61.057
55.000
4.53
0.00
36.20
5.19
95
96
0.886490
CAGCATATCCTTCGTGGGCC
60.886
60.000
0.00
0.00
36.20
5.80
96
97
1.510480
GCAGCATATCCTTCGTGGGC
61.510
60.000
0.00
0.00
36.20
5.36
97
98
0.886490
GGCAGCATATCCTTCGTGGG
60.886
60.000
0.00
0.00
36.20
4.61
98
99
0.886490
GGGCAGCATATCCTTCGTGG
60.886
60.000
0.00
0.00
37.10
4.94
99
100
0.179048
TGGGCAGCATATCCTTCGTG
60.179
55.000
0.00
0.00
0.00
4.35
100
101
0.767375
ATGGGCAGCATATCCTTCGT
59.233
50.000
0.00
0.00
0.00
3.85
101
102
1.162698
CATGGGCAGCATATCCTTCG
58.837
55.000
0.00
0.00
0.00
3.79
102
103
2.283145
ACATGGGCAGCATATCCTTC
57.717
50.000
0.00
0.00
0.00
3.46
103
104
2.553904
GCTACATGGGCAGCATATCCTT
60.554
50.000
10.35
0.00
37.73
3.36
104
105
1.004044
GCTACATGGGCAGCATATCCT
59.996
52.381
10.35
0.00
37.73
3.24
105
106
1.004044
AGCTACATGGGCAGCATATCC
59.996
52.381
15.77
0.00
40.36
2.59
106
107
2.486472
AGCTACATGGGCAGCATATC
57.514
50.000
15.77
0.00
40.36
1.63
107
108
2.965671
AAGCTACATGGGCAGCATAT
57.034
45.000
15.77
2.58
40.36
1.78
108
109
2.734755
AAAGCTACATGGGCAGCATA
57.265
45.000
15.77
0.00
40.36
3.14
109
110
1.856629
AAAAGCTACATGGGCAGCAT
58.143
45.000
15.77
4.12
40.36
3.79
110
111
2.368439
CTAAAAGCTACATGGGCAGCA
58.632
47.619
15.77
0.00
40.36
4.41
111
112
1.678101
CCTAAAAGCTACATGGGCAGC
59.322
52.381
13.84
10.90
38.09
5.25
112
113
1.678101
GCCTAAAAGCTACATGGGCAG
59.322
52.381
13.57
1.96
38.16
4.85
113
114
1.684869
GGCCTAAAAGCTACATGGGCA
60.685
52.381
18.21
0.00
39.79
5.36
114
115
1.032794
GGCCTAAAAGCTACATGGGC
58.967
55.000
10.95
10.95
37.61
5.36
115
116
1.692411
GGGCCTAAAAGCTACATGGG
58.308
55.000
0.84
0.00
0.00
4.00
116
117
1.308998
CGGGCCTAAAAGCTACATGG
58.691
55.000
0.84
0.00
0.00
3.66
117
118
1.308998
CCGGGCCTAAAAGCTACATG
58.691
55.000
0.84
0.00
0.00
3.21
118
119
0.916809
ACCGGGCCTAAAAGCTACAT
59.083
50.000
6.32
0.00
0.00
2.29
119
120
0.035820
CACCGGGCCTAAAAGCTACA
60.036
55.000
6.32
0.00
0.00
2.74
120
121
0.251073
TCACCGGGCCTAAAAGCTAC
59.749
55.000
6.32
0.00
0.00
3.58
121
122
0.251073
GTCACCGGGCCTAAAAGCTA
59.749
55.000
6.32
0.00
0.00
3.32
122
123
1.002502
GTCACCGGGCCTAAAAGCT
60.003
57.895
6.32
0.00
0.00
3.74
123
124
0.891904
TTGTCACCGGGCCTAAAAGC
60.892
55.000
6.32
0.00
0.00
3.51
124
125
1.268625
GTTTGTCACCGGGCCTAAAAG
59.731
52.381
6.32
0.00
0.00
2.27
125
126
1.320507
GTTTGTCACCGGGCCTAAAA
58.679
50.000
6.32
0.00
0.00
1.52
126
127
0.183014
TGTTTGTCACCGGGCCTAAA
59.817
50.000
6.32
0.00
0.00
1.85
127
128
0.402504
ATGTTTGTCACCGGGCCTAA
59.597
50.000
6.32
0.00
0.00
2.69
128
129
0.322098
CATGTTTGTCACCGGGCCTA
60.322
55.000
6.32
0.00
0.00
3.93
129
130
1.603455
CATGTTTGTCACCGGGCCT
60.603
57.895
6.32
0.00
0.00
5.19
130
131
1.586154
CTCATGTTTGTCACCGGGCC
61.586
60.000
6.32
0.00
0.00
5.80
131
132
0.605319
TCTCATGTTTGTCACCGGGC
60.605
55.000
6.32
0.00
0.00
6.13
132
133
1.890876
TTCTCATGTTTGTCACCGGG
58.109
50.000
6.32
0.00
0.00
5.73
133
134
3.366273
CCATTTCTCATGTTTGTCACCGG
60.366
47.826
0.00
0.00
0.00
5.28
134
135
3.366273
CCCATTTCTCATGTTTGTCACCG
60.366
47.826
0.00
0.00
0.00
4.94
135
136
3.826157
TCCCATTTCTCATGTTTGTCACC
59.174
43.478
0.00
0.00
0.00
4.02
136
137
4.278170
TGTCCCATTTCTCATGTTTGTCAC
59.722
41.667
0.00
0.00
0.00
3.67
137
138
4.468713
TGTCCCATTTCTCATGTTTGTCA
58.531
39.130
0.00
0.00
0.00
3.58
138
139
4.082571
CCTGTCCCATTTCTCATGTTTGTC
60.083
45.833
0.00
0.00
0.00
3.18
139
140
3.828451
CCTGTCCCATTTCTCATGTTTGT
59.172
43.478
0.00
0.00
0.00
2.83
140
141
3.367703
GCCTGTCCCATTTCTCATGTTTG
60.368
47.826
0.00
0.00
0.00
2.93
141
142
2.827921
GCCTGTCCCATTTCTCATGTTT
59.172
45.455
0.00
0.00
0.00
2.83
142
143
2.450476
GCCTGTCCCATTTCTCATGTT
58.550
47.619
0.00
0.00
0.00
2.71
143
144
1.341383
GGCCTGTCCCATTTCTCATGT
60.341
52.381
0.00
0.00
0.00
3.21
144
145
1.064166
AGGCCTGTCCCATTTCTCATG
60.064
52.381
3.11
0.00
34.51
3.07
145
146
1.213926
GAGGCCTGTCCCATTTCTCAT
59.786
52.381
12.00
0.00
34.51
2.90
146
147
0.620556
GAGGCCTGTCCCATTTCTCA
59.379
55.000
12.00
0.00
34.51
3.27
147
148
0.915364
AGAGGCCTGTCCCATTTCTC
59.085
55.000
12.00
0.00
34.51
2.87
148
149
0.622665
CAGAGGCCTGTCCCATTTCT
59.377
55.000
12.00
0.00
35.70
2.52
149
150
0.620556
TCAGAGGCCTGTCCCATTTC
59.379
55.000
12.00
0.00
41.16
2.17
150
151
0.622665
CTCAGAGGCCTGTCCCATTT
59.377
55.000
12.00
0.00
41.16
2.32
151
152
0.252881
TCTCAGAGGCCTGTCCCATT
60.253
55.000
12.00
0.00
41.16
3.16
152
153
0.690411
CTCTCAGAGGCCTGTCCCAT
60.690
60.000
12.00
0.00
41.16
4.00
153
154
1.305633
CTCTCAGAGGCCTGTCCCA
60.306
63.158
12.00
0.00
41.16
4.37
154
155
0.616111
TTCTCTCAGAGGCCTGTCCC
60.616
60.000
12.00
0.00
41.16
4.46
155
156
0.534873
GTTCTCTCAGAGGCCTGTCC
59.465
60.000
12.00
0.00
41.16
4.02
156
157
0.172352
CGTTCTCTCAGAGGCCTGTC
59.828
60.000
12.00
0.00
41.16
3.51
157
158
1.882989
GCGTTCTCTCAGAGGCCTGT
61.883
60.000
12.00
1.36
41.16
4.00
158
159
1.153667
GCGTTCTCTCAGAGGCCTG
60.154
63.158
12.00
0.00
41.74
4.85
159
160
1.188219
TTGCGTTCTCTCAGAGGCCT
61.188
55.000
3.86
3.86
0.00
5.19
160
161
0.320771
TTTGCGTTCTCTCAGAGGCC
60.321
55.000
0.57
0.00
0.00
5.19
161
162
0.793250
GTTTGCGTTCTCTCAGAGGC
59.207
55.000
0.57
0.00
0.00
4.70
162
163
1.063806
CGTTTGCGTTCTCTCAGAGG
58.936
55.000
0.57
0.00
0.00
3.69
163
164
0.436531
GCGTTTGCGTTCTCTCAGAG
59.563
55.000
0.00
0.00
40.81
3.35
164
165
2.517598
GCGTTTGCGTTCTCTCAGA
58.482
52.632
0.00
0.00
40.81
3.27
175
176
2.437343
CGACTCTCTCCGCGTTTGC
61.437
63.158
4.92
0.00
37.91
3.68
176
177
0.386858
TTCGACTCTCTCCGCGTTTG
60.387
55.000
4.92
0.00
0.00
2.93
177
178
0.386985
GTTCGACTCTCTCCGCGTTT
60.387
55.000
4.92
0.00
0.00
3.60
178
179
1.209640
GTTCGACTCTCTCCGCGTT
59.790
57.895
4.92
0.00
0.00
4.84
179
180
1.637478
GAGTTCGACTCTCTCCGCGT
61.637
60.000
4.92
0.00
41.88
6.01
180
181
1.061253
GAGTTCGACTCTCTCCGCG
59.939
63.158
0.00
0.00
41.88
6.46
181
182
1.061253
CGAGTTCGACTCTCTCCGC
59.939
63.158
12.82
0.00
42.92
5.54
182
183
1.061253
GCGAGTTCGACTCTCTCCG
59.939
63.158
5.60
4.44
42.92
4.63
183
184
1.430228
GGCGAGTTCGACTCTCTCC
59.570
63.158
5.60
11.03
45.57
3.71
271
272
1.000283
GGAGGAGACGCATATCAGTGG
60.000
57.143
0.00
0.00
0.00
4.00
289
290
0.687757
CGTGAAGATGGGGAGGAGGA
60.688
60.000
0.00
0.00
0.00
3.71
297
298
2.892425
GCGAGGCGTGAAGATGGG
60.892
66.667
0.00
0.00
0.00
4.00
314
315
2.096406
CGATGTTGAACGCAGGCG
59.904
61.111
12.71
12.71
46.03
5.52
407
1141
4.361971
AGGTGGAGCTCCGTCGGA
62.362
66.667
27.43
14.54
39.43
4.55
470
1216
1.270625
CGACAAGCAGGGGTTAACAGA
60.271
52.381
8.10
0.00
0.00
3.41
500
1246
3.705604
ACAAAACTGAAATTGGTGAGCG
58.294
40.909
0.00
0.00
0.00
5.03
505
1251
5.159273
ACCACAACAAAACTGAAATTGGT
57.841
34.783
0.00
0.00
0.00
3.67
525
1271
2.052782
AGGGTTCACACTTCACAACC
57.947
50.000
0.00
0.00
38.07
3.77
527
1273
4.497291
AGTAAGGGTTCACACTTCACAA
57.503
40.909
0.00
0.00
39.19
3.33
528
1274
4.196193
CAAGTAAGGGTTCACACTTCACA
58.804
43.478
0.00
0.00
39.19
3.58
529
1275
4.196971
ACAAGTAAGGGTTCACACTTCAC
58.803
43.478
0.00
0.00
39.19
3.18
532
1278
4.638865
GTCAACAAGTAAGGGTTCACACTT
59.361
41.667
0.00
0.00
43.10
3.16
533
1279
4.080526
AGTCAACAAGTAAGGGTTCACACT
60.081
41.667
0.00
0.00
0.00
3.55
534
1280
4.035208
CAGTCAACAAGTAAGGGTTCACAC
59.965
45.833
0.00
0.00
0.00
3.82
546
1307
1.210478
AGCCACAGTCAGTCAACAAGT
59.790
47.619
0.00
0.00
0.00
3.16
654
1415
1.221021
GGATCCGTGGACTTGGACC
59.779
63.158
0.00
0.00
37.02
4.46
665
1426
1.078214
CTGTGCCATGTGGATCCGT
60.078
57.895
7.39
0.00
37.39
4.69
680
1441
5.178252
CACTGTCGTCATGAAGAAAATCTGT
59.822
40.000
13.12
8.02
0.00
3.41
720
1481
2.745884
TGTCCCGATTTGCAGCCG
60.746
61.111
0.00
0.00
0.00
5.52
744
1505
0.886490
AAGCACAGAGAAACCCAGCG
60.886
55.000
0.00
0.00
0.00
5.18
782
1546
1.460305
AGGCTACATCATCCGGGCT
60.460
57.895
0.00
0.00
0.00
5.19
787
1555
5.674052
ATATCTCACAGGCTACATCATCC
57.326
43.478
0.00
0.00
0.00
3.51
789
1557
7.313740
AGAAATATCTCACAGGCTACATCAT
57.686
36.000
0.00
0.00
0.00
2.45
790
1558
6.737720
AGAAATATCTCACAGGCTACATCA
57.262
37.500
0.00
0.00
0.00
3.07
866
1634
3.484407
CCCTGATTGATAGGAAAGGCAG
58.516
50.000
0.00
0.00
37.52
4.85
885
1656
2.041153
CCACACAAAAGTCCAGCCC
58.959
57.895
0.00
0.00
0.00
5.19
945
1721
6.881065
TCTCAGAGTTTTGGTATTCCTGATTG
59.119
38.462
0.00
0.00
34.23
2.67
946
1722
6.881602
GTCTCAGAGTTTTGGTATTCCTGATT
59.118
38.462
0.00
0.00
34.23
2.57
947
1723
6.013379
TGTCTCAGAGTTTTGGTATTCCTGAT
60.013
38.462
0.00
0.00
34.23
2.90
948
1724
5.306937
TGTCTCAGAGTTTTGGTATTCCTGA
59.693
40.000
0.00
0.00
34.23
3.86
1005
1781
2.287248
GCTTCAGACTGTTTGCTTGGAC
60.287
50.000
1.59
0.00
0.00
4.02
1119
1925
1.447838
GCGATCCTCGGAGTTGCAA
60.448
57.895
4.02
0.00
40.84
4.08
1146
1952
0.392193
CGATGGAGAGTGGCTTTGCT
60.392
55.000
0.00
0.00
0.00
3.91
1199
2008
1.444933
TGGGGAGAAGAAGCCAAGAA
58.555
50.000
0.00
0.00
0.00
2.52
1336
2147
0.315251
TCAGAGCTGTTGGTCACGAG
59.685
55.000
0.00
0.00
42.66
4.18
1338
2149
1.067283
AGATCAGAGCTGTTGGTCACG
60.067
52.381
9.95
0.00
42.66
4.35
1400
2211
2.030805
GCTTCAGTGGTGATGTTGTTCC
60.031
50.000
0.00
0.00
30.85
3.62
1707
2536
2.223923
GCTCTGATACATGGCGAAGACT
60.224
50.000
0.00
0.00
34.59
3.24
1731
2564
0.181350
GGGACATGATGGGACCTGAC
59.819
60.000
0.00
0.00
0.00
3.51
1761
2594
3.574826
AGTAGAACTCACCACCTCTGTTC
59.425
47.826
0.00
0.00
37.76
3.18
1871
2704
6.705863
AGAAAACATCCCAAGATAATGAGC
57.294
37.500
0.00
0.00
0.00
4.26
2008
2841
4.846940
ACATCCTAGGGAAAAGTCAAGACT
59.153
41.667
9.46
0.00
38.18
3.24
2137
2970
0.457853
CTGCATTCTGCTGCGCATTT
60.458
50.000
12.24
0.00
45.31
2.32
2229
3071
1.929494
TCCCCCATCCAAACTAAGCAT
59.071
47.619
0.00
0.00
0.00
3.79
2350
3197
2.991250
AGGCAATCCATCACACAGTAC
58.009
47.619
0.00
0.00
33.74
2.73
2403
3267
8.752187
CCACCTTAGTAAACTTAGTGGTATACA
58.248
37.037
5.01
0.00
35.87
2.29
2475
3344
2.704725
GCACAAATGCGGAAGAAAGA
57.295
45.000
0.00
0.00
43.33
2.52
2496
3366
2.607282
CGACCTCACACTGTAACAGGAC
60.607
54.545
7.66
2.31
35.51
3.85
2567
3442
9.370126
GACTGATAATATATGCACGAACAAAAC
57.630
33.333
0.00
0.00
0.00
2.43
2620
3516
1.135859
CGTCTGACTTTGATGCAAGGC
60.136
52.381
6.21
0.00
0.00
4.35
2673
3569
3.067180
CACTGGTGAAGATGTTGCAACTT
59.933
43.478
28.61
23.00
0.00
2.66
2675
3571
2.358898
ACACTGGTGAAGATGTTGCAAC
59.641
45.455
22.83
22.83
0.00
4.17
2681
3578
4.422073
TCAGAAACACTGGTGAAGATGT
57.578
40.909
7.78
0.00
45.76
3.06
2690
3587
7.925483
TGAAATGGTAAAATTCAGAAACACTGG
59.075
33.333
0.00
0.00
45.76
4.00
2717
3624
6.943981
TCATGAGCACGTAAATATTTACAGC
58.056
36.000
28.93
28.57
42.34
4.40
2903
4094
6.203530
TGACTGCAAAAGACAACAGATAGAAG
59.796
38.462
0.00
0.00
34.25
2.85
3033
4267
6.092092
TGCACTTGGAAACATAATTGAATCG
58.908
36.000
0.00
0.00
42.32
3.34
3047
4281
1.340088
AACATGGCATGCACTTGGAA
58.660
45.000
26.70
0.00
0.00
3.53
3084
4318
9.231297
GCCTGCCAAGAATTAATATCAGTTATA
57.769
33.333
0.00
0.00
0.00
0.98
3102
4345
2.062777
TTTGGTGCTTGCCTGCCAA
61.063
52.632
8.50
8.50
39.00
4.52
3143
4386
1.608055
TGCCCAGTTGTTCTGACATG
58.392
50.000
0.00
0.00
46.27
3.21
3147
4390
3.228188
AGAATTGCCCAGTTGTTCTGA
57.772
42.857
0.00
0.00
46.27
3.27
3208
4458
4.586884
AGCAGTGATGATGTCATTGAAGT
58.413
39.130
0.00
0.00
44.76
3.01
3225
4475
2.093973
CAGAGAAACCATCCGTAGCAGT
60.094
50.000
0.00
0.00
0.00
4.40
3363
4624
1.601759
CACCTTCCAGTGTGCCCTG
60.602
63.158
0.00
0.00
32.89
4.45
3599
4860
5.536161
TGCTCCTTTGCTCAACTAAAGAATT
59.464
36.000
0.00
0.00
36.29
2.17
3606
4867
2.086869
GCATGCTCCTTTGCTCAACTA
58.913
47.619
11.37
0.00
35.95
2.24
3691
4952
3.514645
CTTGTTGGCCAATCAAGCATAC
58.485
45.455
30.45
16.29
33.51
2.39
3715
4976
5.850046
AGCTACCCCTTTGATTATGCTAT
57.150
39.130
0.00
0.00
0.00
2.97
3924
5185
4.038162
GCATGGTTACTCTAGTGTAGGAGG
59.962
50.000
4.93
0.00
34.22
4.30
3930
5191
9.953565
TTATTTTAAGCATGGTTACTCTAGTGT
57.046
29.630
16.65
2.57
0.00
3.55
3971
6093
7.881142
AGCAAGTGCACAAAATGTATTAGTTA
58.119
30.769
21.04
0.00
45.16
2.24
3980
6103
3.188492
TCACAAGCAAGTGCACAAAATG
58.812
40.909
21.04
12.99
45.16
2.32
4004
6127
3.818210
ACATGTAACCGCTGTTTGAATCA
59.182
39.130
0.00
0.00
35.87
2.57
4129
6257
5.479027
GGGAAGTCTCTCATAAGATAGGGAC
59.521
48.000
0.00
0.00
0.00
4.46
4134
6262
5.535406
GGTTCGGGAAGTCTCTCATAAGATA
59.465
44.000
0.00
0.00
0.00
1.98
4145
6285
3.383698
TCTATGAGGTTCGGGAAGTCT
57.616
47.619
0.00
0.00
0.00
3.24
4154
6294
9.413048
GTAGCACTTACATAATCTATGAGGTTC
57.587
37.037
0.75
0.00
39.45
3.62
4198
6338
5.554822
TGTTGTACTTGAGTTGGTCAAAC
57.445
39.130
0.00
0.00
44.83
2.93
4203
6343
2.884639
GCCATGTTGTACTTGAGTTGGT
59.115
45.455
0.00
0.00
0.00
3.67
4230
6404
9.621629
TGGTGATGGGTAATAAGTTAGTATTTG
57.378
33.333
0.00
0.00
0.00
2.32
4232
6406
9.793259
CATGGTGATGGGTAATAAGTTAGTATT
57.207
33.333
0.00
0.00
0.00
1.89
4247
6424
0.819582
GCCTGAAACATGGTGATGGG
59.180
55.000
0.00
0.00
33.39
4.00
4249
6426
2.094390
CCAAGCCTGAAACATGGTGATG
60.094
50.000
0.00
0.00
35.49
3.07
4250
6427
2.173519
CCAAGCCTGAAACATGGTGAT
58.826
47.619
0.00
0.00
0.00
3.06
4251
6428
1.144708
TCCAAGCCTGAAACATGGTGA
59.855
47.619
0.00
0.00
32.90
4.02
4252
6429
1.619654
TCCAAGCCTGAAACATGGTG
58.380
50.000
0.00
0.00
32.90
4.17
4267
6444
5.640158
TTCCTTCTTCCAGTAAGTTCCAA
57.360
39.130
0.00
0.00
36.51
3.53
4338
6515
2.553602
TGGATGCACAATGACACTTGAC
59.446
45.455
0.00
0.00
0.00
3.18
4348
6525
6.041182
ACAATAATGCTATGTGGATGCACAAT
59.959
34.615
24.45
14.46
39.63
2.71
4674
6867
4.183686
CCGGCTTGCATTGGAGCG
62.184
66.667
2.18
0.00
39.78
5.03
4682
6875
3.057174
CCAGTAATTTTAACCGGCTTGCA
60.057
43.478
0.00
0.00
0.00
4.08
4684
6877
4.022676
ACACCAGTAATTTTAACCGGCTTG
60.023
41.667
0.00
0.00
0.00
4.01
4685
6878
4.022676
CACACCAGTAATTTTAACCGGCTT
60.023
41.667
0.00
0.00
0.00
4.35
4686
6879
3.504520
CACACCAGTAATTTTAACCGGCT
59.495
43.478
0.00
0.00
0.00
5.52
4687
6880
3.828786
CACACCAGTAATTTTAACCGGC
58.171
45.455
0.00
0.00
0.00
6.13
4691
6884
6.067263
TGTCAGCACACCAGTAATTTTAAC
57.933
37.500
0.00
0.00
0.00
2.01
4694
6887
5.301551
TCAATGTCAGCACACCAGTAATTTT
59.698
36.000
0.00
0.00
34.48
1.82
4711
6904
8.316640
AGTTTATCAGTCAAAGACTCAATGTC
57.683
34.615
0.00
0.00
41.37
3.06
4712
6905
8.562892
CAAGTTTATCAGTCAAAGACTCAATGT
58.437
33.333
0.00
0.00
41.37
2.71
4714
6907
8.682936
ACAAGTTTATCAGTCAAAGACTCAAT
57.317
30.769
0.00
0.00
41.37
2.57
4766
6959
4.816925
GTCCTTCTTAACAAGCTGACAGTT
59.183
41.667
3.99
0.00
0.00
3.16
4769
6962
4.100963
TGAGTCCTTCTTAACAAGCTGACA
59.899
41.667
0.00
0.00
0.00
3.58
4781
6974
2.026449
CCAAGCCTGATGAGTCCTTCTT
60.026
50.000
0.00
0.00
0.00
2.52
4816
7009
4.347453
GCAAAGGCTGGGTGCGTG
62.347
66.667
2.77
0.00
44.05
5.34
4826
7019
1.135575
CGATCAGTTTCCAGCAAAGGC
60.136
52.381
0.00
0.00
41.61
4.35
4828
7021
1.808945
AGCGATCAGTTTCCAGCAAAG
59.191
47.619
0.00
0.00
0.00
2.77
4829
7022
1.806542
GAGCGATCAGTTTCCAGCAAA
59.193
47.619
0.00
0.00
0.00
3.68
4830
7023
1.002430
AGAGCGATCAGTTTCCAGCAA
59.998
47.619
2.38
0.00
0.00
3.91
4831
7024
0.610174
AGAGCGATCAGTTTCCAGCA
59.390
50.000
2.38
0.00
0.00
4.41
4832
7025
1.663135
GAAGAGCGATCAGTTTCCAGC
59.337
52.381
2.38
0.00
0.00
4.85
4833
7026
2.928757
CAGAAGAGCGATCAGTTTCCAG
59.071
50.000
2.38
0.00
0.00
3.86
4834
7027
2.562738
TCAGAAGAGCGATCAGTTTCCA
59.437
45.455
2.38
0.00
0.00
3.53
4835
7028
3.238108
TCAGAAGAGCGATCAGTTTCC
57.762
47.619
2.38
0.00
0.00
3.13
4836
7029
4.180057
ACATCAGAAGAGCGATCAGTTTC
58.820
43.478
2.38
0.00
0.00
2.78
4837
7030
4.180057
GACATCAGAAGAGCGATCAGTTT
58.820
43.478
2.38
0.00
0.00
2.66
4838
7031
3.430098
GGACATCAGAAGAGCGATCAGTT
60.430
47.826
2.38
0.00
0.00
3.16
4839
7032
2.100584
GGACATCAGAAGAGCGATCAGT
59.899
50.000
2.38
0.00
0.00
3.41
4840
7033
2.100418
TGGACATCAGAAGAGCGATCAG
59.900
50.000
2.38
0.00
0.00
2.90
4841
7034
2.102578
TGGACATCAGAAGAGCGATCA
58.897
47.619
2.38
0.00
0.00
2.92
4842
7035
2.863137
GTTGGACATCAGAAGAGCGATC
59.137
50.000
0.00
0.00
0.00
3.69
4843
7036
2.419297
GGTTGGACATCAGAAGAGCGAT
60.419
50.000
0.00
0.00
0.00
4.58
4844
7037
1.066858
GGTTGGACATCAGAAGAGCGA
60.067
52.381
0.00
0.00
0.00
4.93
4845
7038
1.363744
GGTTGGACATCAGAAGAGCG
58.636
55.000
0.00
0.00
0.00
5.03
4846
7039
1.003580
TGGGTTGGACATCAGAAGAGC
59.996
52.381
0.00
0.00
0.00
4.09
4847
7040
3.641434
ATGGGTTGGACATCAGAAGAG
57.359
47.619
0.00
0.00
0.00
2.85
4848
7041
3.588842
AGAATGGGTTGGACATCAGAAGA
59.411
43.478
0.00
0.00
0.00
2.87
4849
7042
3.944015
GAGAATGGGTTGGACATCAGAAG
59.056
47.826
0.00
0.00
0.00
2.85
4850
7043
3.588842
AGAGAATGGGTTGGACATCAGAA
59.411
43.478
0.00
0.00
0.00
3.02
4851
7044
3.184628
AGAGAATGGGTTGGACATCAGA
58.815
45.455
0.00
0.00
0.00
3.27
4863
7056
1.758936
TCAGCATGCAAGAGAATGGG
58.241
50.000
21.98
0.00
34.76
4.00
4877
7070
4.221262
CCCTTTTCTGATGGATTTTCAGCA
59.779
41.667
0.00
0.00
40.35
4.41
4893
7086
2.158370
TCCCTCCCTTTTGACCCTTTTC
60.158
50.000
0.00
0.00
0.00
2.29
4898
7091
0.039764
CCTTCCCTCCCTTTTGACCC
59.960
60.000
0.00
0.00
0.00
4.46
4916
7109
1.737793
CTAACGAATGTGCAACCTCCC
59.262
52.381
0.00
0.00
34.36
4.30
4923
7116
2.100087
TCGGATAGCTAACGAATGTGCA
59.900
45.455
18.03
0.00
33.21
4.57
4931
7124
5.588240
TGGCATATATTCGGATAGCTAACG
58.412
41.667
13.24
13.24
0.00
3.18
4983
7189
8.976353
AGCATTTACAATACCAAATCAATACCA
58.024
29.630
0.00
0.00
0.00
3.25
5019
7225
7.867305
TGTCAACATTAACCAAGTTTACAGA
57.133
32.000
0.00
0.00
29.22
3.41
5068
7274
6.364165
GCATGGCTAAATTATAGTTGCATGTG
59.636
38.462
0.00
0.00
0.00
3.21
5071
7277
5.335897
CCGCATGGCTAAATTATAGTTGCAT
60.336
40.000
0.00
0.00
0.00
3.96
5086
7292
1.679680
CAATGATTCTTCCGCATGGCT
59.320
47.619
0.00
0.00
34.14
4.75
5087
7293
1.406539
ACAATGATTCTTCCGCATGGC
59.593
47.619
0.00
0.00
34.14
4.40
5088
7294
2.286595
CGACAATGATTCTTCCGCATGG
60.287
50.000
0.00
0.00
0.00
3.66
5089
7295
2.352651
ACGACAATGATTCTTCCGCATG
59.647
45.455
0.00
0.00
0.00
4.06
5090
7296
2.352651
CACGACAATGATTCTTCCGCAT
59.647
45.455
0.00
0.00
0.00
4.73
5091
7297
1.731709
CACGACAATGATTCTTCCGCA
59.268
47.619
0.00
0.00
0.00
5.69
5092
7298
1.999735
TCACGACAATGATTCTTCCGC
59.000
47.619
0.00
0.00
0.00
5.54
5093
7299
2.348666
GGTCACGACAATGATTCTTCCG
59.651
50.000
0.00
0.00
0.00
4.30
5094
7300
3.600388
AGGTCACGACAATGATTCTTCC
58.400
45.455
0.00
0.00
0.00
3.46
5095
7301
4.690748
TCAAGGTCACGACAATGATTCTTC
59.309
41.667
0.00
0.00
0.00
2.87
5096
7302
4.452455
GTCAAGGTCACGACAATGATTCTT
59.548
41.667
7.22
0.00
32.65
2.52
5097
7303
3.997021
GTCAAGGTCACGACAATGATTCT
59.003
43.478
7.22
0.00
32.65
2.40
5098
7304
3.125316
GGTCAAGGTCACGACAATGATTC
59.875
47.826
7.22
1.95
33.66
2.52
5099
7305
3.074412
GGTCAAGGTCACGACAATGATT
58.926
45.455
7.22
0.00
33.66
2.57
5100
7306
2.038426
TGGTCAAGGTCACGACAATGAT
59.962
45.455
7.22
0.00
33.66
2.45
5101
7307
1.414550
TGGTCAAGGTCACGACAATGA
59.585
47.619
0.00
0.27
33.66
2.57
5102
7308
1.877637
TGGTCAAGGTCACGACAATG
58.122
50.000
0.00
0.00
33.66
2.82
5103
7309
2.631160
TTGGTCAAGGTCACGACAAT
57.369
45.000
0.00
0.00
33.66
2.71
5104
7310
2.404923
TTTGGTCAAGGTCACGACAA
57.595
45.000
0.00
0.00
33.66
3.18
5105
7311
2.404923
TTTTGGTCAAGGTCACGACA
57.595
45.000
0.00
0.00
33.66
4.35
5133
7339
8.334632
CGTTGGCTTGTCAAAAAGAAAAATTAT
58.665
29.630
0.00
0.00
0.00
1.28
5134
7340
7.201565
CCGTTGGCTTGTCAAAAAGAAAAATTA
60.202
33.333
0.00
0.00
0.00
1.40
5135
7341
6.403092
CCGTTGGCTTGTCAAAAAGAAAAATT
60.403
34.615
0.00
0.00
0.00
1.82
5136
7342
5.064579
CCGTTGGCTTGTCAAAAAGAAAAAT
59.935
36.000
0.00
0.00
0.00
1.82
5137
7343
4.390297
CCGTTGGCTTGTCAAAAAGAAAAA
59.610
37.500
0.00
0.00
0.00
1.94
5138
7344
3.929610
CCGTTGGCTTGTCAAAAAGAAAA
59.070
39.130
0.00
0.00
0.00
2.29
5139
7345
3.516615
CCGTTGGCTTGTCAAAAAGAAA
58.483
40.909
0.00
0.00
0.00
2.52
5140
7346
2.737039
GCCGTTGGCTTGTCAAAAAGAA
60.737
45.455
0.00
0.00
46.69
2.52
5141
7347
1.202359
GCCGTTGGCTTGTCAAAAAGA
60.202
47.619
0.00
0.00
46.69
2.52
5142
7348
1.208259
GCCGTTGGCTTGTCAAAAAG
58.792
50.000
0.00
0.00
46.69
2.27
5238
7444
3.973472
AGGTCTTCCCTGGTTTTTCTT
57.027
42.857
0.00
0.00
44.08
2.52
5243
7449
3.245264
CCATGTAAGGTCTTCCCTGGTTT
60.245
47.826
0.00
0.00
45.47
3.27
5632
7843
2.031163
GACAGCTGACCGCCTTGT
59.969
61.111
23.35
0.00
40.39
3.16
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.