Multiple sequence alignment - TraesCS2B01G567400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G567400 chr2B 100.000 3002 0 0 1 3002 758391630 758388629 0.000000e+00 5544.0
1 TraesCS2B01G567400 chr2B 97.228 938 15 7 1304 2237 758147959 758147029 0.000000e+00 1578.0
2 TraesCS2B01G567400 chr2B 93.460 474 28 1 766 1236 758150839 758150366 0.000000e+00 701.0
3 TraesCS2B01G567400 chr2B 94.518 456 20 4 766 1220 758374199 758373748 0.000000e+00 699.0
4 TraesCS2B01G567400 chr2B 91.870 492 28 7 1752 2242 758373088 758372608 0.000000e+00 676.0
5 TraesCS2B01G567400 chr2B 84.660 515 51 11 37 542 758151358 758150863 3.480000e-134 488.0
6 TraesCS2B01G567400 chr2B 82.158 482 75 8 2529 3002 758370306 758369828 1.300000e-108 403.0
7 TraesCS2B01G567400 chr2B 81.303 476 71 14 2538 3002 758146853 758146385 1.310000e-98 370.0
8 TraesCS2B01G567400 chr2B 86.667 315 14 9 1367 1653 758373501 758373187 1.040000e-84 324.0
9 TraesCS2B01G567400 chr2B 91.160 181 16 0 2239 2419 53712495 53712675 2.310000e-61 246.0
10 TraesCS2B01G567400 chr2B 88.136 177 12 5 597 764 202906102 202905926 5.070000e-48 202.0
11 TraesCS2B01G567400 chr2B 88.889 63 3 2 1220 1278 758390376 758390314 1.150000e-09 75.0
12 TraesCS2B01G567400 chr2B 88.889 63 3 2 1255 1317 758390411 758390353 1.150000e-09 75.0
13 TraesCS2B01G567400 chr2D 88.295 692 52 13 1567 2242 619436736 619436058 0.000000e+00 802.0
14 TraesCS2B01G567400 chr2D 93.103 493 24 5 1752 2242 619426484 619426000 0.000000e+00 713.0
15 TraesCS2B01G567400 chr2D 91.881 505 28 4 766 1269 619427484 619426992 0.000000e+00 693.0
16 TraesCS2B01G567400 chr2D 86.863 510 35 12 766 1273 619437649 619437170 2.630000e-150 542.0
17 TraesCS2B01G567400 chr2D 84.725 563 49 15 36 592 619438171 619437640 2.050000e-146 529.0
18 TraesCS2B01G567400 chr2D 86.331 417 46 9 1585 1996 620614529 620614939 7.640000e-121 444.0
19 TraesCS2B01G567400 chr2D 86.861 411 35 6 197 592 619427881 619427475 2.750000e-120 442.0
20 TraesCS2B01G567400 chr2D 82.900 462 40 22 1769 2226 585861016 585861442 2.180000e-101 379.0
21 TraesCS2B01G567400 chr2D 81.038 443 66 8 2574 3002 619420417 619419979 1.330000e-88 337.0
22 TraesCS2B01G567400 chr2D 78.667 450 59 19 782 1207 585860158 585860594 6.380000e-67 265.0
23 TraesCS2B01G567400 chr2D 88.780 205 7 8 1257 1461 619427037 619426849 1.390000e-58 237.0
24 TraesCS2B01G567400 chr2D 81.935 310 17 15 1269 1546 619437209 619436907 3.010000e-55 226.0
25 TraesCS2B01G567400 chr2D 94.444 108 4 1 1548 1653 619426664 619426557 6.660000e-37 165.0
26 TraesCS2B01G567400 chr2D 100.000 30 0 0 11 40 21544723 21544694 4.180000e-04 56.5
27 TraesCS2B01G567400 chr2D 100.000 29 0 0 8 36 118819787 118819759 2.000000e-03 54.7
28 TraesCS2B01G567400 chr2A 88.552 594 50 10 1657 2242 750581351 750580768 0.000000e+00 704.0
29 TraesCS2B01G567400 chr2A 88.552 594 50 10 1657 2242 750617396 750616813 0.000000e+00 704.0
30 TraesCS2B01G567400 chr2A 88.364 593 53 9 1657 2242 750745208 750745791 0.000000e+00 699.0
31 TraesCS2B01G567400 chr2A 86.391 507 37 12 766 1270 750744308 750744784 2.650000e-145 525.0
32 TraesCS2B01G567400 chr2A 85.882 510 40 12 766 1273 750582251 750581772 5.740000e-142 514.0
33 TraesCS2B01G567400 chr2A 87.273 330 32 7 267 592 750582565 750582242 4.730000e-98 368.0
34 TraesCS2B01G567400 chr2A 87.195 328 35 4 267 592 750621057 750620735 1.700000e-97 366.0
35 TraesCS2B01G567400 chr2A 86.567 335 36 6 262 592 750743988 750744317 7.910000e-96 361.0
36 TraesCS2B01G567400 chr2A 84.474 380 27 12 896 1273 750618166 750617817 2.220000e-91 346.0
37 TraesCS2B01G567400 chr2A 82.160 426 24 18 1269 1653 750581811 750581397 4.830000e-83 318.0
38 TraesCS2B01G567400 chr2A 82.160 426 24 18 1269 1653 750617856 750617442 4.830000e-83 318.0
39 TraesCS2B01G567400 chr2A 82.051 429 25 18 1266 1653 750744745 750745162 4.830000e-83 318.0
40 TraesCS2B01G567400 chr2A 91.713 181 14 1 2241 2421 5624123 5624302 1.790000e-62 250.0
41 TraesCS2B01G567400 chr2A 93.103 145 10 0 36 180 750743839 750743983 2.340000e-51 213.0
42 TraesCS2B01G567400 chr2A 92.414 145 11 0 36 180 750582721 750582577 1.090000e-49 207.0
43 TraesCS2B01G567400 chr2A 92.414 145 11 0 36 180 750621213 750621069 1.090000e-49 207.0
44 TraesCS2B01G567400 chr2A 87.845 181 13 5 593 764 712188721 712188901 1.410000e-48 204.0
45 TraesCS2B01G567400 chr2A 91.971 137 11 0 766 902 750620744 750620608 3.050000e-45 193.0
46 TraesCS2B01G567400 chr6B 95.181 166 5 3 2254 2418 211161637 211161474 2.970000e-65 259.0
47 TraesCS2B01G567400 chr7B 93.642 173 9 2 2240 2411 700678523 700678694 1.070000e-64 257.0
48 TraesCS2B01G567400 chr4D 93.605 172 8 2 2241 2411 293244523 293244354 1.380000e-63 254.0
49 TraesCS2B01G567400 chr7D 93.529 170 10 1 2244 2412 300112197 300112028 4.970000e-63 252.0
50 TraesCS2B01G567400 chr1D 93.529 170 10 1 2243 2411 11354785 11354616 4.970000e-63 252.0
51 TraesCS2B01G567400 chr1A 92.614 176 11 2 2250 2423 393948456 393948631 4.970000e-63 252.0
52 TraesCS2B01G567400 chr3B 91.304 184 12 3 2229 2411 571752509 571752689 6.430000e-62 248.0
53 TraesCS2B01G567400 chr3B 87.435 191 13 7 582 764 648005359 648005172 3.030000e-50 209.0
54 TraesCS2B01G567400 chr3B 94.737 38 1 1 1 37 820280593 820280556 1.160000e-04 58.4
55 TraesCS2B01G567400 chr3B 94.444 36 1 1 1 35 800116763 800116798 2.000000e-03 54.7
56 TraesCS2B01G567400 chr3A 87.500 200 16 5 574 764 456441964 456442163 3.900000e-54 222.0
57 TraesCS2B01G567400 chr3A 100.000 29 0 0 11 39 714766928 714766900 2.000000e-03 54.7
58 TraesCS2B01G567400 chr4B 88.462 182 12 5 592 764 7476426 7476245 8.430000e-51 211.0
59 TraesCS2B01G567400 chr6A 88.398 181 12 5 593 764 537871892 537871712 3.030000e-50 209.0
60 TraesCS2B01G567400 chr4A 88.398 181 12 5 593 764 743762258 743762438 3.030000e-50 209.0
61 TraesCS2B01G567400 chr4A 91.803 61 5 0 134 194 4824710 4824650 5.330000e-13 86.1
62 TraesCS2B01G567400 chr1B 87.912 182 12 5 593 764 423945560 423945379 3.920000e-49 206.0
63 TraesCS2B01G567400 chr6D 87.293 181 14 5 593 764 11574692 11574512 6.560000e-47 198.0
64 TraesCS2B01G567400 chr3D 100.000 30 0 0 11 40 585912717 585912688 4.180000e-04 56.5
65 TraesCS2B01G567400 chr3D 96.875 32 0 1 8 38 563083858 563083827 5.000000e-03 52.8
66 TraesCS2B01G567400 chr3D 96.875 32 0 1 8 38 563164461 563164430 5.000000e-03 52.8
67 TraesCS2B01G567400 chrUn 94.444 36 1 1 1 35 41985580 41985615 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G567400 chr2B 758388629 758391630 3001 True 1898.000000 5544 92.592667 1 3002 3 chr2B.!!$R4 3001
1 TraesCS2B01G567400 chr2B 758146385 758151358 4973 True 784.250000 1578 89.162750 37 3002 4 chr2B.!!$R2 2965
2 TraesCS2B01G567400 chr2B 758369828 758374199 4371 True 525.500000 699 88.803250 766 3002 4 chr2B.!!$R3 2236
3 TraesCS2B01G567400 chr2D 619436058 619438171 2113 True 524.750000 802 85.454500 36 2242 4 chr2D.!!$R5 2206
4 TraesCS2B01G567400 chr2D 619426000 619427881 1881 True 450.000000 713 91.013800 197 2242 5 chr2D.!!$R4 2045
5 TraesCS2B01G567400 chr2D 585860158 585861442 1284 False 322.000000 379 80.783500 782 2226 2 chr2D.!!$F2 1444
6 TraesCS2B01G567400 chr2A 750743839 750745791 1952 False 423.200000 699 87.295200 36 2242 5 chr2A.!!$F3 2206
7 TraesCS2B01G567400 chr2A 750580768 750582721 1953 True 422.200000 704 87.256200 36 2242 5 chr2A.!!$R1 2206
8 TraesCS2B01G567400 chr2A 750616813 750621213 4400 True 355.666667 704 87.794333 36 2242 6 chr2A.!!$R2 2206

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 452 0.037734 AAACGGCCCCTTTCCACTAG 59.962 55.0 0.00 0.0 0.0 2.57 F
509 605 0.249447 TCTATGGCGGCAACATCTCG 60.249 55.0 18.31 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1264 4522 0.109827 TCATGCAACCAAATGACGCG 60.110 50.0 3.53 3.53 0.00 6.01 R
2168 7582 0.654683 AGTACGTACTGCCGATCGAC 59.345 55.0 26.87 5.29 34.72 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.468141 AAGGATGAACATTAGGTCCTTTTTC 57.532 36.000 0.00 0.00 44.62 2.29
27 28 6.794534 AGGATGAACATTAGGTCCTTTTTCT 58.205 36.000 0.00 0.00 35.87 2.52
28 29 7.928873 AGGATGAACATTAGGTCCTTTTTCTA 58.071 34.615 0.00 0.00 35.87 2.10
29 30 7.829706 AGGATGAACATTAGGTCCTTTTTCTAC 59.170 37.037 0.00 0.00 35.87 2.59
30 31 7.829706 GGATGAACATTAGGTCCTTTTTCTACT 59.170 37.037 0.00 0.00 0.00 2.57
31 32 9.886132 GATGAACATTAGGTCCTTTTTCTACTA 57.114 33.333 0.00 0.00 0.00 1.82
32 33 9.892130 ATGAACATTAGGTCCTTTTTCTACTAG 57.108 33.333 0.00 0.00 0.00 2.57
33 34 8.877195 TGAACATTAGGTCCTTTTTCTACTAGT 58.123 33.333 0.00 0.00 0.00 2.57
34 35 9.152595 GAACATTAGGTCCTTTTTCTACTAGTG 57.847 37.037 5.39 0.00 0.00 2.74
64 65 2.146073 CTTGCGAGCCAAAACCCCAG 62.146 60.000 0.00 0.00 31.94 4.45
97 98 2.125512 CCAGCTACCACACGGCTC 60.126 66.667 0.00 0.00 33.74 4.70
121 122 2.271800 CTGACCCTTAGCGCTAGTTTG 58.728 52.381 17.98 10.09 0.00 2.93
144 145 5.408299 TGTTGTCAAGAATGTATTCTCCACG 59.592 40.000 7.52 0.00 45.83 4.94
162 163 3.430790 CCACGATGTTGAGCAGGAGAATA 60.431 47.826 0.00 0.00 0.00 1.75
176 177 7.388437 AGCAGGAGAATATTGAAGATGATCTC 58.612 38.462 0.00 0.00 0.00 2.75
181 182 6.474630 AGAATATTGAAGATGATCTCCAGCC 58.525 40.000 0.00 0.00 0.00 4.85
194 195 0.178967 TCCAGCCTTTCATGCCACAA 60.179 50.000 0.00 0.00 0.00 3.33
195 196 0.037975 CCAGCCTTTCATGCCACAAC 60.038 55.000 0.00 0.00 0.00 3.32
205 206 2.040947 TCATGCCACAACCCACAAGATA 59.959 45.455 0.00 0.00 0.00 1.98
214 215 5.937540 CACAACCCACAAGATAATGTACTGA 59.062 40.000 0.00 0.00 30.84 3.41
236 237 1.153667 CTGGCGGAGACTTCAGAGC 60.154 63.158 0.00 0.00 34.59 4.09
243 244 1.620819 GGAGACTTCAGAGCACTCCAA 59.379 52.381 0.00 0.00 43.33 3.53
252 310 5.330455 TCAGAGCACTCCAATAGTTGTAG 57.670 43.478 0.00 0.00 35.76 2.74
253 311 4.772624 TCAGAGCACTCCAATAGTTGTAGT 59.227 41.667 0.00 0.00 35.76 2.73
254 312 4.867047 CAGAGCACTCCAATAGTTGTAGTG 59.133 45.833 10.04 10.04 46.60 2.74
255 313 4.081420 AGAGCACTCCAATAGTTGTAGTGG 60.081 45.833 14.49 0.50 44.77 4.00
256 314 2.678336 GCACTCCAATAGTTGTAGTGGC 59.322 50.000 14.49 6.06 44.77 5.01
257 315 2.930040 CACTCCAATAGTTGTAGTGGCG 59.070 50.000 7.32 0.00 43.04 5.69
258 316 2.093658 ACTCCAATAGTTGTAGTGGCGG 60.094 50.000 0.00 0.00 43.04 6.13
259 317 2.167693 CTCCAATAGTTGTAGTGGCGGA 59.832 50.000 0.00 0.00 43.04 5.54
260 318 2.167693 TCCAATAGTTGTAGTGGCGGAG 59.832 50.000 0.00 0.00 43.04 4.63
261 319 2.093658 CCAATAGTTGTAGTGGCGGAGT 60.094 50.000 0.00 0.00 37.57 3.85
262 320 2.930040 CAATAGTTGTAGTGGCGGAGTG 59.070 50.000 0.00 0.00 0.00 3.51
271 329 0.238289 GTGGCGGAGTGTTTGATGTG 59.762 55.000 0.00 0.00 0.00 3.21
282 354 6.073548 GGAGTGTTTGATGTGTCTTGTAAGAG 60.074 42.308 0.00 0.00 35.32 2.85
290 362 7.453393 TGATGTGTCTTGTAAGAGGAAAGAAT 58.547 34.615 0.00 0.00 35.32 2.40
292 364 9.606631 GATGTGTCTTGTAAGAGGAAAGAATAT 57.393 33.333 0.00 0.00 35.32 1.28
337 415 5.440610 AGGTTCAGATTTTGTCAGAGTTGT 58.559 37.500 0.00 0.00 0.00 3.32
370 452 0.037734 AAACGGCCCCTTTCCACTAG 59.962 55.000 0.00 0.00 0.00 2.57
371 453 2.124695 CGGCCCCTTTCCACTAGC 60.125 66.667 0.00 0.00 0.00 3.42
372 454 2.670148 CGGCCCCTTTCCACTAGCT 61.670 63.158 0.00 0.00 0.00 3.32
373 455 1.335132 CGGCCCCTTTCCACTAGCTA 61.335 60.000 0.00 0.00 0.00 3.32
388 470 5.046950 CCACTAGCTATCTAGGCCTAAAAGG 60.047 48.000 14.85 1.80 45.15 3.11
433 529 4.228210 AGTTATCAGATTCCAAGAAGCCCA 59.772 41.667 0.00 0.00 0.00 5.36
471 567 2.571212 AGTGGCAACGATTTTCAGTCA 58.429 42.857 0.00 0.00 42.51 3.41
478 574 5.392380 GGCAACGATTTTCAGTCATCAGATT 60.392 40.000 0.00 0.00 0.00 2.40
481 577 6.174451 ACGATTTTCAGTCATCAGATTGTG 57.826 37.500 0.00 0.00 33.59 3.33
493 589 7.044181 GTCATCAGATTGTGATCCAAACTCTA 58.956 38.462 0.00 0.00 44.73 2.43
509 605 0.249447 TCTATGGCGGCAACATCTCG 60.249 55.000 18.31 0.00 0.00 4.04
582 678 5.045215 CGTCAACACTTTTACAGTCCAGTA 58.955 41.667 0.00 0.00 30.92 2.74
583 679 5.694910 CGTCAACACTTTTACAGTCCAGTAT 59.305 40.000 0.00 0.00 30.92 2.12
584 680 6.128902 CGTCAACACTTTTACAGTCCAGTATC 60.129 42.308 0.00 0.00 30.92 2.24
585 681 6.929606 GTCAACACTTTTACAGTCCAGTATCT 59.070 38.462 0.00 0.00 30.92 1.98
586 682 7.441458 GTCAACACTTTTACAGTCCAGTATCTT 59.559 37.037 0.00 0.00 30.92 2.40
587 683 7.441157 TCAACACTTTTACAGTCCAGTATCTTG 59.559 37.037 0.00 0.00 30.92 3.02
588 684 5.701290 ACACTTTTACAGTCCAGTATCTTGC 59.299 40.000 0.00 0.00 30.92 4.01
589 685 5.700832 CACTTTTACAGTCCAGTATCTTGCA 59.299 40.000 0.00 0.00 30.92 4.08
590 686 5.934625 ACTTTTACAGTCCAGTATCTTGCAG 59.065 40.000 0.00 0.00 0.00 4.41
591 687 4.471904 TTACAGTCCAGTATCTTGCAGG 57.528 45.455 0.00 0.00 0.00 4.85
592 688 1.065854 ACAGTCCAGTATCTTGCAGGC 60.066 52.381 0.00 0.00 0.00 4.85
593 689 1.065926 CAGTCCAGTATCTTGCAGGCA 60.066 52.381 0.00 0.00 0.00 4.75
594 690 1.630369 AGTCCAGTATCTTGCAGGCAA 59.370 47.619 6.53 6.53 0.00 4.52
595 691 2.240667 AGTCCAGTATCTTGCAGGCAAT 59.759 45.455 7.21 0.00 35.20 3.56
596 692 3.455910 AGTCCAGTATCTTGCAGGCAATA 59.544 43.478 7.21 0.49 35.20 1.90
597 693 4.080356 AGTCCAGTATCTTGCAGGCAATAA 60.080 41.667 7.21 0.00 35.20 1.40
598 694 4.823989 GTCCAGTATCTTGCAGGCAATAAT 59.176 41.667 7.21 7.12 35.20 1.28
599 695 5.997746 GTCCAGTATCTTGCAGGCAATAATA 59.002 40.000 7.21 6.22 35.20 0.98
600 696 5.997746 TCCAGTATCTTGCAGGCAATAATAC 59.002 40.000 20.69 20.69 36.17 1.89
601 697 6.000219 CCAGTATCTTGCAGGCAATAATACT 59.000 40.000 23.02 23.02 40.90 2.12
602 698 7.016170 TCCAGTATCTTGCAGGCAATAATACTA 59.984 37.037 25.53 16.68 39.74 1.82
603 699 7.118390 CCAGTATCTTGCAGGCAATAATACTAC 59.882 40.741 25.53 13.16 39.74 2.73
604 700 7.657354 CAGTATCTTGCAGGCAATAATACTACA 59.343 37.037 25.53 4.50 39.74 2.74
605 701 6.867662 ATCTTGCAGGCAATAATACTACAC 57.132 37.500 7.21 0.00 35.20 2.90
606 702 5.123227 TCTTGCAGGCAATAATACTACACC 58.877 41.667 7.21 0.00 35.20 4.16
607 703 4.771114 TGCAGGCAATAATACTACACCT 57.229 40.909 0.00 0.00 0.00 4.00
608 704 5.880164 TGCAGGCAATAATACTACACCTA 57.120 39.130 0.00 0.00 0.00 3.08
609 705 5.607477 TGCAGGCAATAATACTACACCTAC 58.393 41.667 0.00 0.00 0.00 3.18
610 706 4.684703 GCAGGCAATAATACTACACCTACG 59.315 45.833 0.00 0.00 0.00 3.51
611 707 5.508489 GCAGGCAATAATACTACACCTACGA 60.508 44.000 0.00 0.00 0.00 3.43
612 708 6.509656 CAGGCAATAATACTACACCTACGAA 58.490 40.000 0.00 0.00 0.00 3.85
613 709 6.982141 CAGGCAATAATACTACACCTACGAAA 59.018 38.462 0.00 0.00 0.00 3.46
614 710 7.169308 CAGGCAATAATACTACACCTACGAAAG 59.831 40.741 0.00 0.00 0.00 2.62
615 711 6.073927 GGCAATAATACTACACCTACGAAAGC 60.074 42.308 0.00 0.00 0.00 3.51
616 712 6.477688 GCAATAATACTACACCTACGAAAGCA 59.522 38.462 0.00 0.00 0.00 3.91
617 713 7.010738 GCAATAATACTACACCTACGAAAGCAA 59.989 37.037 0.00 0.00 0.00 3.91
618 714 7.998753 ATAATACTACACCTACGAAAGCAAC 57.001 36.000 0.00 0.00 0.00 4.17
619 715 2.669364 ACTACACCTACGAAAGCAACG 58.331 47.619 0.00 0.00 0.00 4.10
620 716 2.035066 ACTACACCTACGAAAGCAACGT 59.965 45.455 7.81 7.81 45.75 3.99
621 717 2.798976 ACACCTACGAAAGCAACGTA 57.201 45.000 0.00 0.00 43.62 3.57
622 718 2.397549 ACACCTACGAAAGCAACGTAC 58.602 47.619 0.00 0.00 43.62 3.67
623 719 1.723003 CACCTACGAAAGCAACGTACC 59.277 52.381 0.00 0.00 43.62 3.34
624 720 1.340889 ACCTACGAAAGCAACGTACCA 59.659 47.619 0.00 0.00 43.62 3.25
625 721 2.224018 ACCTACGAAAGCAACGTACCAA 60.224 45.455 0.00 0.00 43.62 3.67
626 722 2.410730 CCTACGAAAGCAACGTACCAAG 59.589 50.000 0.00 0.00 43.62 3.61
627 723 2.228138 ACGAAAGCAACGTACCAAGA 57.772 45.000 0.00 0.00 42.17 3.02
628 724 2.132762 ACGAAAGCAACGTACCAAGAG 58.867 47.619 0.00 0.00 42.17 2.85
629 725 2.132762 CGAAAGCAACGTACCAAGAGT 58.867 47.619 0.00 0.00 0.00 3.24
630 726 2.542595 CGAAAGCAACGTACCAAGAGTT 59.457 45.455 0.00 0.00 0.00 3.01
631 727 3.737266 CGAAAGCAACGTACCAAGAGTTA 59.263 43.478 0.00 0.00 0.00 2.24
632 728 4.209703 CGAAAGCAACGTACCAAGAGTTAA 59.790 41.667 0.00 0.00 0.00 2.01
633 729 5.413969 AAAGCAACGTACCAAGAGTTAAC 57.586 39.130 0.00 0.00 0.00 2.01
634 730 3.396560 AGCAACGTACCAAGAGTTAACC 58.603 45.455 0.88 0.00 0.00 2.85
635 731 3.070590 AGCAACGTACCAAGAGTTAACCT 59.929 43.478 0.88 0.00 0.00 3.50
636 732 3.185797 GCAACGTACCAAGAGTTAACCTG 59.814 47.826 0.88 0.00 0.00 4.00
637 733 3.036075 ACGTACCAAGAGTTAACCTGC 57.964 47.619 0.88 0.00 0.00 4.85
638 734 2.289257 ACGTACCAAGAGTTAACCTGCC 60.289 50.000 0.88 0.00 0.00 4.85
639 735 2.028385 CGTACCAAGAGTTAACCTGCCT 60.028 50.000 0.88 0.00 0.00 4.75
640 736 3.194116 CGTACCAAGAGTTAACCTGCCTA 59.806 47.826 0.88 0.00 0.00 3.93
641 737 4.322198 CGTACCAAGAGTTAACCTGCCTAA 60.322 45.833 0.88 0.00 0.00 2.69
642 738 4.017177 ACCAAGAGTTAACCTGCCTAAC 57.983 45.455 0.88 0.00 0.00 2.34
643 739 3.244805 ACCAAGAGTTAACCTGCCTAACC 60.245 47.826 0.88 0.00 30.88 2.85
644 740 3.244770 CCAAGAGTTAACCTGCCTAACCA 60.245 47.826 0.88 0.00 30.88 3.67
645 741 4.394729 CAAGAGTTAACCTGCCTAACCAA 58.605 43.478 0.88 0.00 30.88 3.67
646 742 4.929146 AGAGTTAACCTGCCTAACCAAT 57.071 40.909 0.88 0.00 30.88 3.16
647 743 4.844884 AGAGTTAACCTGCCTAACCAATC 58.155 43.478 0.88 0.00 30.88 2.67
648 744 4.536489 AGAGTTAACCTGCCTAACCAATCT 59.464 41.667 0.88 0.00 30.88 2.40
649 745 5.724854 AGAGTTAACCTGCCTAACCAATCTA 59.275 40.000 0.88 0.00 30.88 1.98
650 746 6.387220 AGAGTTAACCTGCCTAACCAATCTAT 59.613 38.462 0.88 0.00 30.88 1.98
651 747 6.592870 AGTTAACCTGCCTAACCAATCTATC 58.407 40.000 0.88 0.00 30.88 2.08
652 748 3.753294 ACCTGCCTAACCAATCTATCG 57.247 47.619 0.00 0.00 0.00 2.92
653 749 2.224305 ACCTGCCTAACCAATCTATCGC 60.224 50.000 0.00 0.00 0.00 4.58
654 750 2.417719 CTGCCTAACCAATCTATCGCC 58.582 52.381 0.00 0.00 0.00 5.54
655 751 1.071699 TGCCTAACCAATCTATCGCCC 59.928 52.381 0.00 0.00 0.00 6.13
656 752 1.610886 GCCTAACCAATCTATCGCCCC 60.611 57.143 0.00 0.00 0.00 5.80
657 753 1.003233 CCTAACCAATCTATCGCCCCC 59.997 57.143 0.00 0.00 0.00 5.40
671 767 4.337013 CCCCCTGATTTTCACCCG 57.663 61.111 0.00 0.00 0.00 5.28
672 768 1.382629 CCCCCTGATTTTCACCCGT 59.617 57.895 0.00 0.00 0.00 5.28
673 769 0.965363 CCCCCTGATTTTCACCCGTG 60.965 60.000 0.00 0.00 0.00 4.94
674 770 0.251165 CCCCTGATTTTCACCCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
675 771 0.881118 CCCTGATTTTCACCCGTGTG 59.119 55.000 0.00 0.00 44.18 3.82
676 772 0.881118 CCTGATTTTCACCCGTGTGG 59.119 55.000 0.00 0.00 42.98 4.17
695 791 4.366684 CCCCTGCCACACCCTTCC 62.367 72.222 0.00 0.00 0.00 3.46
696 792 4.722700 CCCTGCCACACCCTTCCG 62.723 72.222 0.00 0.00 0.00 4.30
697 793 3.953775 CCTGCCACACCCTTCCGT 61.954 66.667 0.00 0.00 0.00 4.69
698 794 2.358737 CTGCCACACCCTTCCGTC 60.359 66.667 0.00 0.00 0.00 4.79
699 795 3.901797 CTGCCACACCCTTCCGTCC 62.902 68.421 0.00 0.00 0.00 4.79
700 796 3.948719 GCCACACCCTTCCGTCCA 61.949 66.667 0.00 0.00 0.00 4.02
701 797 2.833227 CCACACCCTTCCGTCCAA 59.167 61.111 0.00 0.00 0.00 3.53
702 798 1.378762 CCACACCCTTCCGTCCAAT 59.621 57.895 0.00 0.00 0.00 3.16
703 799 0.676782 CCACACCCTTCCGTCCAATC 60.677 60.000 0.00 0.00 0.00 2.67
704 800 0.676782 CACACCCTTCCGTCCAATCC 60.677 60.000 0.00 0.00 0.00 3.01
705 801 1.077716 CACCCTTCCGTCCAATCCC 60.078 63.158 0.00 0.00 0.00 3.85
706 802 1.540367 ACCCTTCCGTCCAATCCCA 60.540 57.895 0.00 0.00 0.00 4.37
707 803 1.137594 ACCCTTCCGTCCAATCCCAA 61.138 55.000 0.00 0.00 0.00 4.12
708 804 0.258774 CCCTTCCGTCCAATCCCAAT 59.741 55.000 0.00 0.00 0.00 3.16
709 805 1.680338 CCTTCCGTCCAATCCCAATC 58.320 55.000 0.00 0.00 0.00 2.67
710 806 1.680338 CTTCCGTCCAATCCCAATCC 58.320 55.000 0.00 0.00 0.00 3.01
711 807 1.212935 CTTCCGTCCAATCCCAATCCT 59.787 52.381 0.00 0.00 0.00 3.24
712 808 0.546122 TCCGTCCAATCCCAATCCTG 59.454 55.000 0.00 0.00 0.00 3.86
713 809 1.103398 CCGTCCAATCCCAATCCTGC 61.103 60.000 0.00 0.00 0.00 4.85
714 810 0.394216 CGTCCAATCCCAATCCTGCA 60.394 55.000 0.00 0.00 0.00 4.41
715 811 1.106285 GTCCAATCCCAATCCTGCAC 58.894 55.000 0.00 0.00 0.00 4.57
716 812 0.394216 TCCAATCCCAATCCTGCACG 60.394 55.000 0.00 0.00 0.00 5.34
717 813 0.680921 CCAATCCCAATCCTGCACGT 60.681 55.000 0.00 0.00 0.00 4.49
718 814 1.176527 CAATCCCAATCCTGCACGTT 58.823 50.000 0.00 0.00 0.00 3.99
719 815 1.135315 CAATCCCAATCCTGCACGTTG 60.135 52.381 0.00 0.00 0.00 4.10
720 816 1.315257 ATCCCAATCCTGCACGTTGC 61.315 55.000 3.44 3.44 45.29 4.17
721 817 2.568090 CCAATCCTGCACGTTGCC 59.432 61.111 7.38 0.00 44.23 4.52
722 818 1.973281 CCAATCCTGCACGTTGCCT 60.973 57.895 7.38 0.00 44.23 4.75
723 819 0.676466 CCAATCCTGCACGTTGCCTA 60.676 55.000 7.38 0.00 44.23 3.93
724 820 1.382522 CAATCCTGCACGTTGCCTAT 58.617 50.000 7.38 0.00 44.23 2.57
725 821 1.745087 CAATCCTGCACGTTGCCTATT 59.255 47.619 7.38 2.99 44.23 1.73
726 822 2.942376 CAATCCTGCACGTTGCCTATTA 59.058 45.455 7.38 0.00 44.23 0.98
727 823 2.018542 TCCTGCACGTTGCCTATTAC 57.981 50.000 7.38 0.00 44.23 1.89
728 824 0.650512 CCTGCACGTTGCCTATTACG 59.349 55.000 7.38 0.00 44.23 3.18
755 851 8.953368 AAAATCTATACGTAACTTTACCTGGG 57.047 34.615 0.00 0.00 0.00 4.45
756 852 7.666063 AATCTATACGTAACTTTACCTGGGT 57.334 36.000 0.00 0.00 0.00 4.51
757 853 6.699575 TCTATACGTAACTTTACCTGGGTC 57.300 41.667 0.00 0.00 0.00 4.46
758 854 6.186957 TCTATACGTAACTTTACCTGGGTCA 58.813 40.000 0.00 0.00 0.00 4.02
759 855 5.945144 ATACGTAACTTTACCTGGGTCAT 57.055 39.130 0.00 0.00 0.00 3.06
760 856 4.628963 ACGTAACTTTACCTGGGTCATT 57.371 40.909 0.00 0.00 0.00 2.57
761 857 4.320870 ACGTAACTTTACCTGGGTCATTG 58.679 43.478 0.00 0.00 0.00 2.82
762 858 3.126343 CGTAACTTTACCTGGGTCATTGC 59.874 47.826 0.00 0.00 0.00 3.56
763 859 3.525800 AACTTTACCTGGGTCATTGCT 57.474 42.857 0.00 0.00 0.00 3.91
764 860 2.795329 ACTTTACCTGGGTCATTGCTG 58.205 47.619 0.00 0.00 0.00 4.41
833 929 3.589988 CACACCTCGTATCTTTTGAGCT 58.410 45.455 0.00 0.00 0.00 4.09
867 963 3.645975 CGCGTGCGTTGGGACTTT 61.646 61.111 6.00 0.00 31.41 2.66
891 3435 2.973945 GGGACGCCTATAAATAGCAGG 58.026 52.381 0.00 0.00 0.00 4.85
894 3438 3.586892 GACGCCTATAAATAGCAGGACC 58.413 50.000 0.00 0.00 0.00 4.46
1023 3602 1.742768 GTCGAGGGATCCGCTGATT 59.257 57.895 5.45 0.00 0.00 2.57
1143 3722 2.579201 CCGTCGCAGGTGGAGAAT 59.421 61.111 0.00 0.00 0.00 2.40
1237 3841 2.278336 GCATGCATGCGCGTCATT 60.278 55.556 33.99 0.00 44.67 2.57
1239 3843 1.914389 CATGCATGCGCGTCATTTG 59.086 52.632 14.93 3.97 42.97 2.32
1243 4501 1.676438 GCATGCGCGTCATTTGGTTG 61.676 55.000 8.43 1.80 31.79 3.77
1250 4508 2.402305 GCGTCATTTGGTTGCATGAAA 58.598 42.857 0.00 0.00 31.14 2.69
1252 4510 3.061161 GCGTCATTTGGTTGCATGAAATC 59.939 43.478 0.00 0.00 31.14 2.17
1256 4514 4.691685 TCATTTGGTTGCATGAAATCTTGC 59.308 37.500 12.80 12.80 44.38 4.01
1326 6273 3.121496 GCGTCCTTTGTTTTAAACATGCG 60.121 43.478 11.50 11.82 41.79 4.73
1485 6641 2.219216 CCTTTGTTTTTCGTGCATGCAG 59.781 45.455 23.41 15.31 0.00 4.41
2080 7489 7.932335 TCCAAACGTGTCACACTAAATAAATT 58.068 30.769 6.33 0.00 31.34 1.82
2081 7490 9.053840 TCCAAACGTGTCACACTAAATAAATTA 57.946 29.630 6.33 0.00 31.34 1.40
2082 7491 9.666626 CCAAACGTGTCACACTAAATAAATTAA 57.333 29.630 6.33 0.00 31.34 1.40
2168 7582 7.063898 GTGACACTGCATAATATACTGGCTATG 59.936 40.741 0.00 0.00 0.00 2.23
2222 7638 1.233950 TGTGTACTTGGTGCATGGCG 61.234 55.000 0.00 0.00 30.01 5.69
2226 7642 1.396996 GTACTTGGTGCATGGCGTAAG 59.603 52.381 0.00 0.00 43.44 2.34
2261 7677 8.854614 ACCATATAATATGCTTTCTCTGTTCC 57.145 34.615 0.00 0.00 0.00 3.62
2262 7678 8.664079 ACCATATAATATGCTTTCTCTGTTCCT 58.336 33.333 0.00 0.00 0.00 3.36
2272 7688 8.635765 TGCTTTCTCTGTTCCTAAATATTTGT 57.364 30.769 11.05 0.00 0.00 2.83
2273 7689 8.730680 TGCTTTCTCTGTTCCTAAATATTTGTC 58.269 33.333 11.05 0.00 0.00 3.18
2274 7690 8.951243 GCTTTCTCTGTTCCTAAATATTTGTCT 58.049 33.333 11.05 0.00 0.00 3.41
2298 7714 9.877178 TCTTTCTAGAGATTTCAACTAATGACC 57.123 33.333 0.00 0.00 37.92 4.02
2299 7715 9.658799 CTTTCTAGAGATTTCAACTAATGACCA 57.341 33.333 0.00 0.00 37.92 4.02
2300 7716 9.436957 TTTCTAGAGATTTCAACTAATGACCAC 57.563 33.333 0.00 0.00 37.92 4.16
2301 7717 8.134202 TCTAGAGATTTCAACTAATGACCACA 57.866 34.615 0.00 0.00 37.92 4.17
2302 7718 8.762645 TCTAGAGATTTCAACTAATGACCACAT 58.237 33.333 0.00 0.00 37.92 3.21
2304 7720 8.723942 AGAGATTTCAACTAATGACCACATAC 57.276 34.615 0.00 0.00 37.92 2.39
2305 7721 7.492669 AGAGATTTCAACTAATGACCACATACG 59.507 37.037 0.00 0.00 37.92 3.06
2306 7722 6.538742 AGATTTCAACTAATGACCACATACGG 59.461 38.462 0.00 0.00 37.92 4.02
2307 7723 5.408880 TTCAACTAATGACCACATACGGA 57.591 39.130 0.00 0.00 37.92 4.69
2308 7724 5.006153 TCAACTAATGACCACATACGGAG 57.994 43.478 0.00 0.00 35.50 4.63
2309 7725 3.454371 ACTAATGACCACATACGGAGC 57.546 47.619 0.00 0.00 35.50 4.70
2310 7726 2.764010 ACTAATGACCACATACGGAGCA 59.236 45.455 0.00 0.00 35.50 4.26
2311 7727 2.779755 AATGACCACATACGGAGCAA 57.220 45.000 0.00 0.00 35.50 3.91
2312 7728 2.779755 ATGACCACATACGGAGCAAA 57.220 45.000 0.00 0.00 34.71 3.68
2313 7729 2.552599 TGACCACATACGGAGCAAAA 57.447 45.000 0.00 0.00 0.00 2.44
2314 7730 3.066291 TGACCACATACGGAGCAAAAT 57.934 42.857 0.00 0.00 0.00 1.82
2315 7731 2.746904 TGACCACATACGGAGCAAAATG 59.253 45.455 0.00 0.00 0.00 2.32
2316 7732 3.006940 GACCACATACGGAGCAAAATGA 58.993 45.455 0.00 0.00 0.00 2.57
2317 7733 3.009723 ACCACATACGGAGCAAAATGAG 58.990 45.455 0.00 0.00 0.00 2.90
2318 7734 3.009723 CCACATACGGAGCAAAATGAGT 58.990 45.455 0.00 0.00 0.00 3.41
2319 7735 3.181507 CCACATACGGAGCAAAATGAGTG 60.182 47.826 0.00 0.00 0.00 3.51
2320 7736 3.684305 CACATACGGAGCAAAATGAGTGA 59.316 43.478 0.00 0.00 0.00 3.41
2321 7737 4.154015 CACATACGGAGCAAAATGAGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
2322 7738 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2323 7739 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2324 7740 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2325 7741 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2326 7742 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2327 7743 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2328 7744 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2361 7777 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2363 7779 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2364 7780 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2365 7781 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2366 7782 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
2367 7783 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
2368 7784 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
2369 7785 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
2370 7786 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
2371 7787 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
2372 7788 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
2373 7789 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
2374 7790 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
2375 7791 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
2376 7792 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
2377 7793 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
2378 7794 7.065803 CGTATGTGGTAGTCCATTTGAAATCTT 59.934 37.037 0.00 0.00 46.20 2.40
2379 7795 9.391006 GTATGTGGTAGTCCATTTGAAATCTTA 57.609 33.333 0.00 0.00 46.20 2.10
2380 7796 8.877864 ATGTGGTAGTCCATTTGAAATCTTAA 57.122 30.769 0.00 0.00 46.20 1.85
2381 7797 8.698973 TGTGGTAGTCCATTTGAAATCTTAAA 57.301 30.769 0.00 0.00 46.20 1.52
2382 7798 9.137459 TGTGGTAGTCCATTTGAAATCTTAAAA 57.863 29.630 0.00 0.00 46.20 1.52
2383 7799 9.974980 GTGGTAGTCCATTTGAAATCTTAAAAA 57.025 29.630 0.00 0.00 46.20 1.94
2406 7822 8.581253 AAAGACAAATATTTAGGAACAGAGGG 57.419 34.615 0.00 0.00 0.00 4.30
2407 7823 7.510675 AGACAAATATTTAGGAACAGAGGGA 57.489 36.000 0.00 0.00 0.00 4.20
2408 7824 7.569240 AGACAAATATTTAGGAACAGAGGGAG 58.431 38.462 0.00 0.00 0.00 4.30
2409 7825 7.182930 AGACAAATATTTAGGAACAGAGGGAGT 59.817 37.037 0.00 0.00 0.00 3.85
2410 7826 8.388656 ACAAATATTTAGGAACAGAGGGAGTA 57.611 34.615 0.00 0.00 0.00 2.59
2411 7827 8.265764 ACAAATATTTAGGAACAGAGGGAGTAC 58.734 37.037 0.00 0.00 0.00 2.73
2412 7828 6.651975 ATATTTAGGAACAGAGGGAGTACG 57.348 41.667 0.00 0.00 0.00 3.67
2413 7829 3.446442 TTAGGAACAGAGGGAGTACGT 57.554 47.619 0.00 0.00 0.00 3.57
2414 7830 1.546961 AGGAACAGAGGGAGTACGTG 58.453 55.000 0.00 0.00 0.00 4.49
2415 7831 1.203025 AGGAACAGAGGGAGTACGTGT 60.203 52.381 0.00 0.00 0.00 4.49
2416 7832 1.617357 GGAACAGAGGGAGTACGTGTT 59.383 52.381 0.00 0.00 34.08 3.32
2417 7833 2.821969 GGAACAGAGGGAGTACGTGTTA 59.178 50.000 0.00 0.00 31.57 2.41
2418 7834 3.256631 GGAACAGAGGGAGTACGTGTTAA 59.743 47.826 0.00 0.00 31.57 2.01
2419 7835 3.930634 ACAGAGGGAGTACGTGTTAAC 57.069 47.619 0.00 0.00 0.00 2.01
2433 7849 3.241084 CGTGTTAACGTTGTTGTTGTTGC 60.241 43.478 11.99 0.00 44.93 4.17
2443 7865 4.333913 TGTTGTTGTTGCCATAATGCTT 57.666 36.364 0.00 0.00 0.00 3.91
2444 7866 4.056740 TGTTGTTGTTGCCATAATGCTTG 58.943 39.130 0.00 0.00 0.00 4.01
2448 7870 1.477700 TGTTGCCATAATGCTTGCTCC 59.522 47.619 0.00 0.00 0.00 4.70
2454 7876 5.323581 TGCCATAATGCTTGCTCCATTATA 58.676 37.500 13.08 1.68 41.49 0.98
2455 7877 5.953548 TGCCATAATGCTTGCTCCATTATAT 59.046 36.000 13.08 0.00 41.49 0.86
2456 7878 6.095860 TGCCATAATGCTTGCTCCATTATATC 59.904 38.462 13.08 9.96 41.49 1.63
2459 7881 8.404000 CCATAATGCTTGCTCCATTATATCTTC 58.596 37.037 13.08 0.00 41.49 2.87
2490 7912 6.208644 GTGAAACAATGTGTTATGCTCTTGT 58.791 36.000 0.00 0.00 40.14 3.16
2496 7918 4.098914 TGTGTTATGCTCTTGTTCCCTT 57.901 40.909 0.00 0.00 0.00 3.95
2498 7920 3.191371 GTGTTATGCTCTTGTTCCCTTGG 59.809 47.826 0.00 0.00 0.00 3.61
2502 7924 2.586425 TGCTCTTGTTCCCTTGGAAAG 58.414 47.619 0.00 0.00 43.86 2.62
2527 10118 4.813027 CAATCTCCCCAAGTTGATTGTTG 58.187 43.478 3.87 0.00 40.20 3.33
2531 10138 3.828451 CTCCCCAAGTTGATTGTTGATGT 59.172 43.478 3.87 0.00 37.17 3.06
2566 10177 5.755849 ACACCCAATAGCAAAAGTATAGCT 58.244 37.500 0.00 0.00 42.14 3.32
2576 10187 7.130681 AGCAAAAGTATAGCTGAAGGATACT 57.869 36.000 0.00 0.00 43.88 2.12
2592 10203 4.216708 GGATACTACTTACCAGCCAGAGT 58.783 47.826 0.00 0.00 0.00 3.24
2595 10206 2.826725 ACTACTTACCAGCCAGAGTCAC 59.173 50.000 0.00 0.00 0.00 3.67
2604 10215 3.027412 CAGCCAGAGTCACCTATGTAGT 58.973 50.000 0.00 0.00 0.00 2.73
2616 10227 7.123247 AGTCACCTATGTAGTTGTAATAACCGT 59.877 37.037 0.00 0.00 0.00 4.83
2622 10233 6.283544 TGTAGTTGTAATAACCGTGGATGA 57.716 37.500 0.00 0.00 0.00 2.92
2651 10262 9.862371 CTTCATAAGAAGTGTCCGCTATATTAT 57.138 33.333 0.00 0.00 44.97 1.28
2652 10263 9.856488 TTCATAAGAAGTGTCCGCTATATTATC 57.144 33.333 0.00 0.00 0.00 1.75
2653 10264 8.467598 TCATAAGAAGTGTCCGCTATATTATCC 58.532 37.037 0.00 0.00 0.00 2.59
2654 10265 6.919775 AAGAAGTGTCCGCTATATTATCCT 57.080 37.500 0.00 0.00 0.00 3.24
2655 10266 9.696572 ATAAGAAGTGTCCGCTATATTATCCTA 57.303 33.333 0.00 0.00 0.00 2.94
2656 10267 7.633193 AGAAGTGTCCGCTATATTATCCTAG 57.367 40.000 0.00 0.00 0.00 3.02
2657 10268 7.403671 AGAAGTGTCCGCTATATTATCCTAGA 58.596 38.462 0.00 0.00 0.00 2.43
2658 10269 8.056400 AGAAGTGTCCGCTATATTATCCTAGAT 58.944 37.037 0.00 0.00 0.00 1.98
2659 10270 7.575414 AGTGTCCGCTATATTATCCTAGATG 57.425 40.000 0.00 0.00 0.00 2.90
2660 10271 7.120051 AGTGTCCGCTATATTATCCTAGATGT 58.880 38.462 0.00 0.00 0.00 3.06
2661 10272 7.283580 AGTGTCCGCTATATTATCCTAGATGTC 59.716 40.741 0.00 0.00 0.00 3.06
2662 10273 7.283580 GTGTCCGCTATATTATCCTAGATGTCT 59.716 40.741 0.00 0.00 0.00 3.41
2663 10274 8.491958 TGTCCGCTATATTATCCTAGATGTCTA 58.508 37.037 0.00 0.00 0.00 2.59
2674 10285 5.309638 TCCTAGATGTCTAGACGATCCTTG 58.690 45.833 17.85 11.58 46.80 3.61
2682 10293 6.522054 TGTCTAGACGATCCTTGAAAGTTTT 58.478 36.000 17.85 0.00 0.00 2.43
2689 10302 6.899114 ACGATCCTTGAAAGTTTTATGTGAC 58.101 36.000 0.00 0.00 0.00 3.67
2695 10308 8.372459 TCCTTGAAAGTTTTATGTGACTAGCTA 58.628 33.333 0.00 0.00 0.00 3.32
2697 10310 7.576750 TGAAAGTTTTATGTGACTAGCTACG 57.423 36.000 0.00 0.00 0.00 3.51
2743 10356 7.686438 AGATTTGTTAGTGATTGTATGCACA 57.314 32.000 0.00 0.00 37.48 4.57
2759 10372 4.852134 TGCACAATCCCATGCATATTAC 57.148 40.909 0.00 0.00 46.63 1.89
2760 10373 3.252944 TGCACAATCCCATGCATATTACG 59.747 43.478 0.00 0.00 46.63 3.18
2762 10375 4.613622 GCACAATCCCATGCATATTACGAC 60.614 45.833 0.00 0.00 41.65 4.34
2764 10377 3.678056 ATCCCATGCATATTACGACGT 57.322 42.857 5.52 5.52 0.00 4.34
2774 10387 4.563976 GCATATTACGACGTGGTTGTAACT 59.436 41.667 8.96 4.36 42.75 2.24
2779 10392 3.632189 ACGACGTGGTTGTAACTCTAAC 58.368 45.455 0.00 0.00 0.00 2.34
2788 10401 4.322198 GGTTGTAACTCTAACCGTGATCCA 60.322 45.833 0.00 0.00 37.23 3.41
2790 10403 5.258456 TGTAACTCTAACCGTGATCCATC 57.742 43.478 0.00 0.00 0.00 3.51
2812 10425 3.519510 CCCTCTTTTCTCATACTCACCCA 59.480 47.826 0.00 0.00 0.00 4.51
2814 10427 5.514834 CCCTCTTTTCTCATACTCACCCAAA 60.515 44.000 0.00 0.00 0.00 3.28
2816 10429 4.994852 TCTTTTCTCATACTCACCCAAACG 59.005 41.667 0.00 0.00 0.00 3.60
2828 10441 1.235724 CCCAAACGTGTTCTCTTCCC 58.764 55.000 0.00 0.00 0.00 3.97
2839 10453 3.460340 TGTTCTCTTCCCTAACCCAACAA 59.540 43.478 0.00 0.00 0.00 2.83
2841 10455 2.038033 TCTCTTCCCTAACCCAACAACG 59.962 50.000 0.00 0.00 0.00 4.10
2847 10461 0.250553 CTAACCCAACAACGCCTCCA 60.251 55.000 0.00 0.00 0.00 3.86
2853 10467 1.247567 CAACAACGCCTCCATTTCCT 58.752 50.000 0.00 0.00 0.00 3.36
2854 10468 1.613437 CAACAACGCCTCCATTTCCTT 59.387 47.619 0.00 0.00 0.00 3.36
2872 10486 6.891306 TTCCTTCTTTATCTCATCTTCCCA 57.109 37.500 0.00 0.00 0.00 4.37
2874 10488 5.726308 TCCTTCTTTATCTCATCTTCCCACA 59.274 40.000 0.00 0.00 0.00 4.17
2875 10489 6.215431 TCCTTCTTTATCTCATCTTCCCACAA 59.785 38.462 0.00 0.00 0.00 3.33
2877 10491 8.213679 CCTTCTTTATCTCATCTTCCCACAATA 58.786 37.037 0.00 0.00 0.00 1.90
2879 10493 8.324191 TCTTTATCTCATCTTCCCACAATAGT 57.676 34.615 0.00 0.00 0.00 2.12
2882 10496 3.519107 TCTCATCTTCCCACAATAGTGCA 59.481 43.478 0.00 0.00 44.53 4.57
2884 10498 2.489938 TCTTCCCACAATAGTGCACC 57.510 50.000 14.63 0.00 44.53 5.01
2895 10509 5.874810 CACAATAGTGCACCTATAACTGTGT 59.125 40.000 14.63 8.54 37.49 3.72
2897 10511 5.932619 ATAGTGCACCTATAACTGTGTCA 57.067 39.130 14.63 0.00 34.49 3.58
2899 10513 3.000727 GTGCACCTATAACTGTGTCACC 58.999 50.000 5.22 0.00 35.45 4.02
2900 10514 2.268298 GCACCTATAACTGTGTCACCG 58.732 52.381 0.00 0.00 34.94 4.94
2904 10518 3.057033 ACCTATAACTGTGTCACCGTGTC 60.057 47.826 0.34 0.00 0.00 3.67
2906 10520 2.502213 TAACTGTGTCACCGTGTCAG 57.498 50.000 0.34 14.52 0.00 3.51
2917 10531 1.323412 CCGTGTCAGGGAGATCTAGG 58.677 60.000 5.60 0.00 0.00 3.02
2929 10543 1.213182 AGATCTAGGCTCGAGTGGTCA 59.787 52.381 15.13 0.00 0.00 4.02
2949 10563 4.005650 TCATCACTGCACAAAAGGAGATC 58.994 43.478 0.00 0.00 0.00 2.75
2959 10573 5.645497 GCACAAAAGGAGATCAATAGTGAGT 59.355 40.000 0.00 0.00 37.14 3.41
2987 10604 0.467290 GTTGCAACCCTCCTTCACCA 60.467 55.000 19.15 0.00 0.00 4.17
2995 10612 2.379907 ACCCTCCTTCACCACATCAAAT 59.620 45.455 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.794534 AGAAAAAGGACCTAATGTTCATCCT 58.205 36.000 0.00 0.00 41.70 3.24
4 5 7.829706 AGTAGAAAAAGGACCTAATGTTCATCC 59.170 37.037 0.00 0.00 0.00 3.51
5 6 8.794335 AGTAGAAAAAGGACCTAATGTTCATC 57.206 34.615 0.00 0.00 0.00 2.92
6 7 9.892130 CTAGTAGAAAAAGGACCTAATGTTCAT 57.108 33.333 0.00 0.00 0.00 2.57
7 8 8.877195 ACTAGTAGAAAAAGGACCTAATGTTCA 58.123 33.333 3.59 0.00 0.00 3.18
8 9 9.152595 CACTAGTAGAAAAAGGACCTAATGTTC 57.847 37.037 3.59 0.00 0.00 3.18
9 10 8.657712 ACACTAGTAGAAAAAGGACCTAATGTT 58.342 33.333 3.59 0.00 0.00 2.71
10 11 8.203681 ACACTAGTAGAAAAAGGACCTAATGT 57.796 34.615 3.59 0.00 0.00 2.71
11 12 8.936864 CAACACTAGTAGAAAAAGGACCTAATG 58.063 37.037 3.59 0.00 0.00 1.90
12 13 8.101419 CCAACACTAGTAGAAAAAGGACCTAAT 58.899 37.037 3.59 0.00 0.00 1.73
13 14 7.071572 ACCAACACTAGTAGAAAAAGGACCTAA 59.928 37.037 3.59 0.00 0.00 2.69
14 15 6.556116 ACCAACACTAGTAGAAAAAGGACCTA 59.444 38.462 3.59 0.00 0.00 3.08
15 16 5.368816 ACCAACACTAGTAGAAAAAGGACCT 59.631 40.000 3.59 0.00 0.00 3.85
16 17 5.469084 CACCAACACTAGTAGAAAAAGGACC 59.531 44.000 3.59 0.00 0.00 4.46
17 18 5.469084 CCACCAACACTAGTAGAAAAAGGAC 59.531 44.000 3.59 0.00 0.00 3.85
18 19 5.131475 ACCACCAACACTAGTAGAAAAAGGA 59.869 40.000 3.59 0.00 0.00 3.36
19 20 5.238650 CACCACCAACACTAGTAGAAAAAGG 59.761 44.000 3.59 1.96 0.00 3.11
20 21 6.018180 GTCACCACCAACACTAGTAGAAAAAG 60.018 42.308 3.59 0.00 0.00 2.27
21 22 5.818857 GTCACCACCAACACTAGTAGAAAAA 59.181 40.000 3.59 0.00 0.00 1.94
22 23 5.129815 AGTCACCACCAACACTAGTAGAAAA 59.870 40.000 3.59 0.00 0.00 2.29
23 24 4.652421 AGTCACCACCAACACTAGTAGAAA 59.348 41.667 3.59 0.00 0.00 2.52
24 25 4.220724 AGTCACCACCAACACTAGTAGAA 58.779 43.478 3.59 0.00 0.00 2.10
25 26 3.840991 AGTCACCACCAACACTAGTAGA 58.159 45.455 3.59 0.00 0.00 2.59
26 27 4.307432 CAAGTCACCACCAACACTAGTAG 58.693 47.826 0.00 0.00 0.00 2.57
27 28 3.493699 GCAAGTCACCACCAACACTAGTA 60.494 47.826 0.00 0.00 0.00 1.82
28 29 2.745152 GCAAGTCACCACCAACACTAGT 60.745 50.000 0.00 0.00 0.00 2.57
29 30 1.873591 GCAAGTCACCACCAACACTAG 59.126 52.381 0.00 0.00 0.00 2.57
30 31 1.808512 CGCAAGTCACCACCAACACTA 60.809 52.381 0.00 0.00 0.00 2.74
31 32 1.095228 CGCAAGTCACCACCAACACT 61.095 55.000 0.00 0.00 0.00 3.55
32 33 1.092921 TCGCAAGTCACCACCAACAC 61.093 55.000 0.00 0.00 39.48 3.32
33 34 0.813610 CTCGCAAGTCACCACCAACA 60.814 55.000 0.00 0.00 39.48 3.33
34 35 1.941812 CTCGCAAGTCACCACCAAC 59.058 57.895 0.00 0.00 39.48 3.77
64 65 3.253230 AGCTGGAATGCAAAAATAACGC 58.747 40.909 0.00 0.00 34.99 4.84
97 98 2.279502 TAGCGCTAAGGGTCAGCACG 62.280 60.000 16.33 0.00 39.04 5.34
121 122 5.637810 TCGTGGAGAATACATTCTTGACAAC 59.362 40.000 5.95 0.00 46.47 3.32
140 141 0.247460 TCTCCTGCTCAACATCGTGG 59.753 55.000 0.00 0.00 0.00 4.94
144 145 6.765036 TCTTCAATATTCTCCTGCTCAACATC 59.235 38.462 0.00 0.00 0.00 3.06
162 163 4.792513 AAGGCTGGAGATCATCTTCAAT 57.207 40.909 0.00 0.00 30.19 2.57
181 182 1.039068 TGTGGGTTGTGGCATGAAAG 58.961 50.000 0.00 0.00 0.00 2.62
194 195 6.213600 AGACTTCAGTACATTATCTTGTGGGT 59.786 38.462 0.00 0.00 0.00 4.51
195 196 6.536582 CAGACTTCAGTACATTATCTTGTGGG 59.463 42.308 0.00 0.00 0.00 4.61
205 206 1.899814 TCCGCCAGACTTCAGTACATT 59.100 47.619 0.00 0.00 0.00 2.71
243 244 2.176889 ACACTCCGCCACTACAACTAT 58.823 47.619 0.00 0.00 0.00 2.12
252 310 0.238289 CACATCAAACACTCCGCCAC 59.762 55.000 0.00 0.00 0.00 5.01
253 311 0.179032 ACACATCAAACACTCCGCCA 60.179 50.000 0.00 0.00 0.00 5.69
254 312 0.517316 GACACATCAAACACTCCGCC 59.483 55.000 0.00 0.00 0.00 6.13
255 313 1.512926 AGACACATCAAACACTCCGC 58.487 50.000 0.00 0.00 0.00 5.54
256 314 2.872245 ACAAGACACATCAAACACTCCG 59.128 45.455 0.00 0.00 0.00 4.63
257 315 5.758296 TCTTACAAGACACATCAAACACTCC 59.242 40.000 0.00 0.00 0.00 3.85
258 316 6.073548 CCTCTTACAAGACACATCAAACACTC 60.074 42.308 0.00 0.00 0.00 3.51
259 317 5.760253 CCTCTTACAAGACACATCAAACACT 59.240 40.000 0.00 0.00 0.00 3.55
260 318 5.758296 TCCTCTTACAAGACACATCAAACAC 59.242 40.000 0.00 0.00 0.00 3.32
261 319 5.924356 TCCTCTTACAAGACACATCAAACA 58.076 37.500 0.00 0.00 0.00 2.83
262 320 6.861065 TTCCTCTTACAAGACACATCAAAC 57.139 37.500 0.00 0.00 0.00 2.93
301 378 1.459592 CTGAACCTACGGTGCGAAAAG 59.540 52.381 0.00 0.00 32.81 2.27
306 384 1.722011 AAATCTGAACCTACGGTGCG 58.278 50.000 0.00 0.00 32.81 5.34
311 389 5.230942 ACTCTGACAAAATCTGAACCTACG 58.769 41.667 0.00 0.00 35.10 3.51
337 415 4.202388 GGGGCCGTTTGGAGTTATAATCTA 60.202 45.833 0.00 0.00 37.49 1.98
370 452 5.070580 TCTCAACCTTTTAGGCCTAGATAGC 59.929 44.000 13.36 0.00 39.63 2.97
371 453 6.732896 TCTCAACCTTTTAGGCCTAGATAG 57.267 41.667 13.36 11.12 39.63 2.08
372 454 6.043243 CCATCTCAACCTTTTAGGCCTAGATA 59.957 42.308 13.36 0.00 39.63 1.98
373 455 5.163152 CCATCTCAACCTTTTAGGCCTAGAT 60.163 44.000 13.36 7.80 39.63 1.98
388 470 2.715046 TCTGCAATGGTCCATCTCAAC 58.285 47.619 4.39 0.00 0.00 3.18
471 567 6.996879 CCATAGAGTTTGGATCACAATCTGAT 59.003 38.462 10.43 0.00 42.84 2.90
478 574 2.419990 CCGCCATAGAGTTTGGATCACA 60.420 50.000 0.00 0.00 36.26 3.58
481 577 1.230324 GCCGCCATAGAGTTTGGATC 58.770 55.000 0.00 0.00 36.26 3.36
493 589 2.514592 CCGAGATGTTGCCGCCAT 60.515 61.111 0.00 0.00 0.00 4.40
509 605 2.165301 CGTTTCTGATCGGACGGCC 61.165 63.158 2.94 0.00 32.29 6.13
582 678 5.765182 GGTGTAGTATTATTGCCTGCAAGAT 59.235 40.000 10.64 9.17 39.47 2.40
583 679 5.104527 AGGTGTAGTATTATTGCCTGCAAGA 60.105 40.000 10.64 2.67 39.47 3.02
584 680 5.126067 AGGTGTAGTATTATTGCCTGCAAG 58.874 41.667 10.64 0.00 39.47 4.01
585 681 5.110814 AGGTGTAGTATTATTGCCTGCAA 57.889 39.130 7.06 7.06 40.47 4.08
586 682 4.771114 AGGTGTAGTATTATTGCCTGCA 57.229 40.909 0.00 0.00 0.00 4.41
587 683 4.684703 CGTAGGTGTAGTATTATTGCCTGC 59.315 45.833 0.00 0.00 0.00 4.85
588 684 6.080648 TCGTAGGTGTAGTATTATTGCCTG 57.919 41.667 0.00 0.00 0.00 4.85
589 685 6.720112 TTCGTAGGTGTAGTATTATTGCCT 57.280 37.500 0.00 0.00 0.00 4.75
590 686 6.073927 GCTTTCGTAGGTGTAGTATTATTGCC 60.074 42.308 0.00 0.00 0.00 4.52
591 687 6.477688 TGCTTTCGTAGGTGTAGTATTATTGC 59.522 38.462 0.00 0.00 0.00 3.56
592 688 7.997107 TGCTTTCGTAGGTGTAGTATTATTG 57.003 36.000 0.00 0.00 0.00 1.90
593 689 7.221452 CGTTGCTTTCGTAGGTGTAGTATTATT 59.779 37.037 0.00 0.00 0.00 1.40
594 690 6.694411 CGTTGCTTTCGTAGGTGTAGTATTAT 59.306 38.462 0.00 0.00 0.00 1.28
595 691 6.029607 CGTTGCTTTCGTAGGTGTAGTATTA 58.970 40.000 0.00 0.00 0.00 0.98
596 692 4.860907 CGTTGCTTTCGTAGGTGTAGTATT 59.139 41.667 0.00 0.00 0.00 1.89
597 693 4.082571 ACGTTGCTTTCGTAGGTGTAGTAT 60.083 41.667 0.30 0.00 39.78 2.12
598 694 3.253188 ACGTTGCTTTCGTAGGTGTAGTA 59.747 43.478 0.30 0.00 39.78 1.82
599 695 2.035066 ACGTTGCTTTCGTAGGTGTAGT 59.965 45.455 0.30 0.00 39.78 2.73
600 696 2.669364 ACGTTGCTTTCGTAGGTGTAG 58.331 47.619 0.30 0.00 39.78 2.74
601 697 2.798976 ACGTTGCTTTCGTAGGTGTA 57.201 45.000 0.30 0.00 39.78 2.90
602 698 2.397549 GTACGTTGCTTTCGTAGGTGT 58.602 47.619 0.00 0.00 42.88 4.16
603 699 1.723003 GGTACGTTGCTTTCGTAGGTG 59.277 52.381 0.00 0.00 42.88 4.00
604 700 1.340889 TGGTACGTTGCTTTCGTAGGT 59.659 47.619 0.00 0.00 42.88 3.08
605 701 2.068837 TGGTACGTTGCTTTCGTAGG 57.931 50.000 0.00 0.00 42.88 3.18
606 702 3.311106 TCTTGGTACGTTGCTTTCGTAG 58.689 45.455 0.00 1.35 42.88 3.51
607 703 3.243501 ACTCTTGGTACGTTGCTTTCGTA 60.244 43.478 0.00 4.99 41.72 3.43
608 704 2.132762 CTCTTGGTACGTTGCTTTCGT 58.867 47.619 0.00 6.63 43.86 3.85
609 705 2.132762 ACTCTTGGTACGTTGCTTTCG 58.867 47.619 0.00 0.00 0.00 3.46
610 706 5.438117 GTTAACTCTTGGTACGTTGCTTTC 58.562 41.667 0.00 0.00 0.00 2.62
611 707 4.274214 GGTTAACTCTTGGTACGTTGCTTT 59.726 41.667 5.42 0.00 0.00 3.51
612 708 3.811497 GGTTAACTCTTGGTACGTTGCTT 59.189 43.478 5.42 0.00 0.00 3.91
613 709 3.070590 AGGTTAACTCTTGGTACGTTGCT 59.929 43.478 5.42 0.00 0.00 3.91
614 710 3.185797 CAGGTTAACTCTTGGTACGTTGC 59.814 47.826 5.42 0.00 0.00 4.17
615 711 3.185797 GCAGGTTAACTCTTGGTACGTTG 59.814 47.826 5.42 0.00 0.00 4.10
616 712 3.396560 GCAGGTTAACTCTTGGTACGTT 58.603 45.455 5.42 0.00 0.00 3.99
617 713 2.289257 GGCAGGTTAACTCTTGGTACGT 60.289 50.000 5.42 0.00 0.00 3.57
618 714 2.028385 AGGCAGGTTAACTCTTGGTACG 60.028 50.000 5.42 0.00 0.00 3.67
619 715 3.697619 AGGCAGGTTAACTCTTGGTAC 57.302 47.619 5.42 0.00 0.00 3.34
620 716 4.019950 GGTTAGGCAGGTTAACTCTTGGTA 60.020 45.833 5.42 0.00 32.81 3.25
621 717 3.244805 GGTTAGGCAGGTTAACTCTTGGT 60.245 47.826 5.42 0.00 32.81 3.67
622 718 3.244770 TGGTTAGGCAGGTTAACTCTTGG 60.245 47.826 5.42 0.00 32.81 3.61
623 719 4.015872 TGGTTAGGCAGGTTAACTCTTG 57.984 45.455 5.42 3.57 32.81 3.02
624 720 4.717279 TTGGTTAGGCAGGTTAACTCTT 57.283 40.909 5.42 0.00 32.81 2.85
625 721 4.536489 AGATTGGTTAGGCAGGTTAACTCT 59.464 41.667 5.42 0.00 32.81 3.24
626 722 4.844884 AGATTGGTTAGGCAGGTTAACTC 58.155 43.478 5.42 0.00 32.81 3.01
627 723 4.929146 AGATTGGTTAGGCAGGTTAACT 57.071 40.909 5.42 0.00 32.81 2.24
628 724 5.465724 CGATAGATTGGTTAGGCAGGTTAAC 59.534 44.000 0.00 0.00 39.76 2.01
629 725 5.607477 CGATAGATTGGTTAGGCAGGTTAA 58.393 41.667 0.00 0.00 39.76 2.01
630 726 4.502604 GCGATAGATTGGTTAGGCAGGTTA 60.503 45.833 0.00 0.00 39.76 2.85
631 727 3.744530 GCGATAGATTGGTTAGGCAGGTT 60.745 47.826 0.00 0.00 39.76 3.50
632 728 2.224305 GCGATAGATTGGTTAGGCAGGT 60.224 50.000 0.00 0.00 39.76 4.00
633 729 2.417719 GCGATAGATTGGTTAGGCAGG 58.582 52.381 0.00 0.00 39.76 4.85
634 730 2.417719 GGCGATAGATTGGTTAGGCAG 58.582 52.381 0.00 0.00 39.76 4.85
635 731 1.071699 GGGCGATAGATTGGTTAGGCA 59.928 52.381 0.00 0.00 39.76 4.75
636 732 1.610886 GGGGCGATAGATTGGTTAGGC 60.611 57.143 0.00 0.00 39.76 3.93
637 733 1.003233 GGGGGCGATAGATTGGTTAGG 59.997 57.143 0.00 0.00 39.76 2.69
638 734 2.474410 GGGGGCGATAGATTGGTTAG 57.526 55.000 0.00 0.00 39.76 2.34
654 750 0.965363 CACGGGTGAAAATCAGGGGG 60.965 60.000 0.00 0.00 0.00 5.40
655 751 0.251165 ACACGGGTGAAAATCAGGGG 60.251 55.000 5.71 0.00 0.00 4.79
656 752 3.339547 ACACGGGTGAAAATCAGGG 57.660 52.632 5.71 0.00 0.00 4.45
678 774 4.366684 GGAAGGGTGTGGCAGGGG 62.367 72.222 0.00 0.00 0.00 4.79
679 775 4.722700 CGGAAGGGTGTGGCAGGG 62.723 72.222 0.00 0.00 0.00 4.45
680 776 3.901797 GACGGAAGGGTGTGGCAGG 62.902 68.421 0.00 0.00 0.00 4.85
681 777 2.358737 GACGGAAGGGTGTGGCAG 60.359 66.667 0.00 0.00 0.00 4.85
682 778 3.948719 GGACGGAAGGGTGTGGCA 61.949 66.667 0.00 0.00 0.00 4.92
683 779 2.764637 ATTGGACGGAAGGGTGTGGC 62.765 60.000 0.00 0.00 0.00 5.01
684 780 0.676782 GATTGGACGGAAGGGTGTGG 60.677 60.000 0.00 0.00 0.00 4.17
685 781 0.676782 GGATTGGACGGAAGGGTGTG 60.677 60.000 0.00 0.00 0.00 3.82
686 782 1.683441 GGATTGGACGGAAGGGTGT 59.317 57.895 0.00 0.00 0.00 4.16
687 783 1.077716 GGGATTGGACGGAAGGGTG 60.078 63.158 0.00 0.00 0.00 4.61
688 784 1.137594 TTGGGATTGGACGGAAGGGT 61.138 55.000 0.00 0.00 0.00 4.34
689 785 0.258774 ATTGGGATTGGACGGAAGGG 59.741 55.000 0.00 0.00 0.00 3.95
690 786 1.680338 GATTGGGATTGGACGGAAGG 58.320 55.000 0.00 0.00 0.00 3.46
691 787 1.212935 AGGATTGGGATTGGACGGAAG 59.787 52.381 0.00 0.00 0.00 3.46
692 788 1.064758 CAGGATTGGGATTGGACGGAA 60.065 52.381 0.00 0.00 0.00 4.30
693 789 0.546122 CAGGATTGGGATTGGACGGA 59.454 55.000 0.00 0.00 0.00 4.69
694 790 1.103398 GCAGGATTGGGATTGGACGG 61.103 60.000 0.00 0.00 0.00 4.79
695 791 0.394216 TGCAGGATTGGGATTGGACG 60.394 55.000 0.00 0.00 0.00 4.79
696 792 1.106285 GTGCAGGATTGGGATTGGAC 58.894 55.000 0.00 0.00 0.00 4.02
697 793 0.394216 CGTGCAGGATTGGGATTGGA 60.394 55.000 0.00 0.00 0.00 3.53
698 794 0.680921 ACGTGCAGGATTGGGATTGG 60.681 55.000 14.38 0.00 0.00 3.16
699 795 1.135315 CAACGTGCAGGATTGGGATTG 60.135 52.381 14.38 1.37 0.00 2.67
700 796 1.176527 CAACGTGCAGGATTGGGATT 58.823 50.000 14.38 0.00 0.00 3.01
701 797 1.315257 GCAACGTGCAGGATTGGGAT 61.315 55.000 14.38 0.00 44.26 3.85
702 798 1.971167 GCAACGTGCAGGATTGGGA 60.971 57.895 14.38 0.00 44.26 4.37
703 799 2.568090 GCAACGTGCAGGATTGGG 59.432 61.111 14.38 0.00 44.26 4.12
715 811 8.360855 CGTATAGATTTTACGTAATAGGCAACG 58.639 37.037 9.18 10.19 44.47 4.10
730 826 8.542926 ACCCAGGTAAAGTTACGTATAGATTTT 58.457 33.333 0.00 0.00 34.50 1.82
731 827 8.082672 ACCCAGGTAAAGTTACGTATAGATTT 57.917 34.615 0.00 0.00 34.50 2.17
732 828 7.342799 TGACCCAGGTAAAGTTACGTATAGATT 59.657 37.037 0.00 0.00 34.50 2.40
733 829 6.835488 TGACCCAGGTAAAGTTACGTATAGAT 59.165 38.462 0.00 0.00 34.50 1.98
734 830 6.186957 TGACCCAGGTAAAGTTACGTATAGA 58.813 40.000 0.00 0.00 34.50 1.98
735 831 6.455360 TGACCCAGGTAAAGTTACGTATAG 57.545 41.667 0.00 0.00 34.50 1.31
736 832 7.267128 CAATGACCCAGGTAAAGTTACGTATA 58.733 38.462 0.00 0.00 34.50 1.47
737 833 5.945144 ATGACCCAGGTAAAGTTACGTAT 57.055 39.130 0.00 0.00 34.50 3.06
738 834 5.481105 CAATGACCCAGGTAAAGTTACGTA 58.519 41.667 0.00 0.00 34.50 3.57
739 835 4.320870 CAATGACCCAGGTAAAGTTACGT 58.679 43.478 0.00 0.00 34.50 3.57
740 836 3.126343 GCAATGACCCAGGTAAAGTTACG 59.874 47.826 0.00 0.00 34.50 3.18
741 837 4.156008 CAGCAATGACCCAGGTAAAGTTAC 59.844 45.833 0.00 0.00 0.00 2.50
742 838 4.042311 TCAGCAATGACCCAGGTAAAGTTA 59.958 41.667 0.00 0.00 0.00 2.24
743 839 3.157087 CAGCAATGACCCAGGTAAAGTT 58.843 45.455 0.00 0.00 0.00 2.66
744 840 2.375174 TCAGCAATGACCCAGGTAAAGT 59.625 45.455 0.00 0.00 0.00 2.66
745 841 3.071874 TCAGCAATGACCCAGGTAAAG 57.928 47.619 0.00 0.00 0.00 1.85
746 842 3.266772 AGATCAGCAATGACCCAGGTAAA 59.733 43.478 0.00 0.00 0.00 2.01
747 843 2.846206 AGATCAGCAATGACCCAGGTAA 59.154 45.455 0.00 0.00 0.00 2.85
748 844 2.481441 AGATCAGCAATGACCCAGGTA 58.519 47.619 0.00 0.00 0.00 3.08
749 845 1.293062 AGATCAGCAATGACCCAGGT 58.707 50.000 0.00 0.00 0.00 4.00
750 846 2.431954 AAGATCAGCAATGACCCAGG 57.568 50.000 0.00 0.00 0.00 4.45
751 847 3.349927 TGAAAGATCAGCAATGACCCAG 58.650 45.455 0.00 0.00 0.00 4.45
752 848 3.349927 CTGAAAGATCAGCAATGACCCA 58.650 45.455 0.00 0.00 46.11 4.51
763 859 6.014242 ACTGATCACAAGTACCTGAAAGATCA 60.014 38.462 18.61 18.61 38.50 2.92
764 860 6.402222 ACTGATCACAAGTACCTGAAAGATC 58.598 40.000 14.03 14.03 34.07 2.75
833 929 1.066752 CGTTCTCGGTGTGACCACA 59.933 57.895 0.00 0.00 43.71 4.17
867 963 2.493278 GCTATTTATAGGCGTCCCGGTA 59.507 50.000 0.00 0.00 35.76 4.02
891 3435 0.242825 TATATGCAGCGGCGTAGGTC 59.757 55.000 15.88 0.00 44.29 3.85
894 3438 0.038618 TGGTATATGCAGCGGCGTAG 60.039 55.000 15.88 2.06 44.29 3.51
1023 3602 2.758327 CCGACGATCCTCCCCACA 60.758 66.667 0.00 0.00 0.00 4.17
1083 3662 1.937278 TCTCGCGGTTGTTGTACAAA 58.063 45.000 10.51 0.00 40.15 2.83
1084 3663 2.063266 GATCTCGCGGTTGTTGTACAA 58.937 47.619 6.13 3.59 35.42 2.41
1230 3834 2.063156 TTCATGCAACCAAATGACGC 57.937 45.000 0.00 0.00 32.63 5.19
1236 3840 4.069300 TGCAAGATTTCATGCAACCAAA 57.931 36.364 7.92 0.00 45.88 3.28
1237 3841 3.747854 TGCAAGATTTCATGCAACCAA 57.252 38.095 7.92 0.00 45.88 3.67
1256 4514 1.476235 CCAAATGACGCGCATGCATG 61.476 55.000 22.70 22.70 42.97 4.06
1257 4515 1.226745 CCAAATGACGCGCATGCAT 60.227 52.632 19.57 4.33 42.97 3.96
1258 4516 2.139888 AACCAAATGACGCGCATGCA 62.140 50.000 19.57 1.56 42.97 3.96
1259 4517 1.444212 AACCAAATGACGCGCATGC 60.444 52.632 5.73 7.91 37.28 4.06
1260 4518 1.676438 GCAACCAAATGACGCGCATG 61.676 55.000 5.73 1.53 37.28 4.06
1262 4520 2.050533 GCAACCAAATGACGCGCA 60.051 55.556 5.73 5.73 0.00 6.09
1263 4521 1.444212 ATGCAACCAAATGACGCGC 60.444 52.632 5.73 0.00 0.00 6.86
1264 4522 0.109827 TCATGCAACCAAATGACGCG 60.110 50.000 3.53 3.53 0.00 6.01
1265 4523 2.063156 TTCATGCAACCAAATGACGC 57.937 45.000 0.00 0.00 32.63 5.19
1266 4524 4.236147 TGATTTCATGCAACCAAATGACG 58.764 39.130 0.00 0.00 32.63 4.35
1267 4525 6.102006 CATGATTTCATGCAACCAAATGAC 57.898 37.500 7.56 0.00 45.92 3.06
1309 6256 5.116377 ACGCATACGCATGTTTAAAACAAAG 59.884 36.000 0.00 0.00 44.03 2.77
1485 6641 2.546368 TCACGAAATGGTTAGCACACAC 59.454 45.455 0.00 0.00 0.00 3.82
2040 7449 2.106938 GGATGGAGCGATCGTGCA 59.893 61.111 17.81 14.70 37.31 4.57
2168 7582 0.654683 AGTACGTACTGCCGATCGAC 59.345 55.000 26.87 5.29 34.72 4.20
2247 7663 8.635765 ACAAATATTTAGGAACAGAGAAAGCA 57.364 30.769 0.00 0.00 0.00 3.91
2272 7688 9.877178 GGTCATTAGTTGAAATCTCTAGAAAGA 57.123 33.333 0.00 0.00 35.70 2.52
2273 7689 9.658799 TGGTCATTAGTTGAAATCTCTAGAAAG 57.341 33.333 0.00 0.00 35.70 2.62
2274 7690 9.436957 GTGGTCATTAGTTGAAATCTCTAGAAA 57.563 33.333 0.00 0.00 35.70 2.52
2275 7691 8.593679 TGTGGTCATTAGTTGAAATCTCTAGAA 58.406 33.333 0.00 0.00 35.70 2.10
2276 7692 8.134202 TGTGGTCATTAGTTGAAATCTCTAGA 57.866 34.615 0.00 0.00 35.70 2.43
2277 7693 8.954950 ATGTGGTCATTAGTTGAAATCTCTAG 57.045 34.615 0.00 0.00 35.70 2.43
2278 7694 9.817809 GTATGTGGTCATTAGTTGAAATCTCTA 57.182 33.333 0.00 0.00 35.70 2.43
2279 7695 7.492669 CGTATGTGGTCATTAGTTGAAATCTCT 59.507 37.037 0.00 0.00 35.70 3.10
2280 7696 7.254455 CCGTATGTGGTCATTAGTTGAAATCTC 60.254 40.741 0.00 0.00 35.70 2.75
2281 7697 6.538742 CCGTATGTGGTCATTAGTTGAAATCT 59.461 38.462 0.00 0.00 35.70 2.40
2282 7698 6.537301 TCCGTATGTGGTCATTAGTTGAAATC 59.463 38.462 0.00 0.00 35.70 2.17
2283 7699 6.411376 TCCGTATGTGGTCATTAGTTGAAAT 58.589 36.000 0.00 0.00 35.70 2.17
2284 7700 5.795972 TCCGTATGTGGTCATTAGTTGAAA 58.204 37.500 0.00 0.00 35.70 2.69
2285 7701 5.408880 TCCGTATGTGGTCATTAGTTGAA 57.591 39.130 0.00 0.00 35.70 2.69
2286 7702 4.679639 GCTCCGTATGTGGTCATTAGTTGA 60.680 45.833 0.00 0.00 35.70 3.18
2287 7703 3.555956 GCTCCGTATGTGGTCATTAGTTG 59.444 47.826 0.00 0.00 35.70 3.16
2288 7704 3.196901 TGCTCCGTATGTGGTCATTAGTT 59.803 43.478 0.00 0.00 35.70 2.24
2289 7705 2.764010 TGCTCCGTATGTGGTCATTAGT 59.236 45.455 0.00 0.00 35.70 2.24
2290 7706 3.452755 TGCTCCGTATGTGGTCATTAG 57.547 47.619 0.00 0.00 35.70 1.73
2291 7707 3.897141 TTGCTCCGTATGTGGTCATTA 57.103 42.857 0.00 0.00 35.70 1.90
2292 7708 2.779755 TTGCTCCGTATGTGGTCATT 57.220 45.000 0.00 0.00 35.70 2.57
2293 7709 2.779755 TTTGCTCCGTATGTGGTCAT 57.220 45.000 0.00 0.00 38.00 3.06
2294 7710 2.552599 TTTTGCTCCGTATGTGGTCA 57.447 45.000 0.00 0.00 0.00 4.02
2295 7711 3.006940 TCATTTTGCTCCGTATGTGGTC 58.993 45.455 0.00 0.00 0.00 4.02
2296 7712 3.009723 CTCATTTTGCTCCGTATGTGGT 58.990 45.455 0.00 0.00 0.00 4.16
2297 7713 3.009723 ACTCATTTTGCTCCGTATGTGG 58.990 45.455 0.00 0.00 0.00 4.17
2298 7714 3.684305 TCACTCATTTTGCTCCGTATGTG 59.316 43.478 0.00 0.00 0.00 3.21
2299 7715 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2300 7716 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2301 7717 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2302 7718 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2303 7719 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2304 7720 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2305 7721 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2306 7722 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2307 7723 8.798859 AATAGTGTAGATTCACTCATTTTGCT 57.201 30.769 2.59 0.00 45.79 3.91
2335 7751 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2337 7753 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2338 7754 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2339 7755 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2340 7756 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
2341 7757 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
2342 7758 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
2343 7759 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
2344 7760 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
2345 7761 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
2346 7762 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2380 7796 9.025041 CCCTCTGTTCCTAAATATTTGTCTTTT 57.975 33.333 11.05 0.00 0.00 2.27
2381 7797 8.390921 TCCCTCTGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
2382 7798 7.928873 TCCCTCTGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
2383 7799 7.182930 ACTCCCTCTGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 0.00 3.41
2384 7800 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
2385 7801 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
2386 7802 7.438459 CGTACTCCCTCTGTTCCTAAATATTTG 59.562 40.741 11.05 1.40 0.00 2.32
2387 7803 7.125356 ACGTACTCCCTCTGTTCCTAAATATTT 59.875 37.037 5.89 5.89 0.00 1.40
2388 7804 6.610425 ACGTACTCCCTCTGTTCCTAAATATT 59.390 38.462 0.00 0.00 0.00 1.28
2389 7805 6.040616 CACGTACTCCCTCTGTTCCTAAATAT 59.959 42.308 0.00 0.00 0.00 1.28
2390 7806 5.359009 CACGTACTCCCTCTGTTCCTAAATA 59.641 44.000 0.00 0.00 0.00 1.40
2391 7807 4.159879 CACGTACTCCCTCTGTTCCTAAAT 59.840 45.833 0.00 0.00 0.00 1.40
2392 7808 3.508793 CACGTACTCCCTCTGTTCCTAAA 59.491 47.826 0.00 0.00 0.00 1.85
2393 7809 3.087031 CACGTACTCCCTCTGTTCCTAA 58.913 50.000 0.00 0.00 0.00 2.69
2394 7810 2.040813 ACACGTACTCCCTCTGTTCCTA 59.959 50.000 0.00 0.00 0.00 2.94
2395 7811 1.203025 ACACGTACTCCCTCTGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
2396 7812 1.254954 ACACGTACTCCCTCTGTTCC 58.745 55.000 0.00 0.00 0.00 3.62
2397 7813 4.233005 GTTAACACGTACTCCCTCTGTTC 58.767 47.826 0.00 0.00 0.00 3.18
2398 7814 3.304928 CGTTAACACGTACTCCCTCTGTT 60.305 47.826 6.39 0.00 41.84 3.16
2399 7815 2.227388 CGTTAACACGTACTCCCTCTGT 59.773 50.000 6.39 0.00 41.84 3.41
2400 7816 2.860062 CGTTAACACGTACTCCCTCTG 58.140 52.381 6.39 0.00 41.84 3.35
2412 7828 3.059702 GGCAACAACAACAACGTTAACAC 59.940 43.478 0.00 0.00 0.00 3.32
2413 7829 3.243336 GGCAACAACAACAACGTTAACA 58.757 40.909 0.00 0.00 0.00 2.41
2414 7830 3.892527 GGCAACAACAACAACGTTAAC 57.107 42.857 0.00 0.00 0.00 2.01
2433 7849 7.876936 AGATATAATGGAGCAAGCATTATGG 57.123 36.000 0.43 0.00 34.51 2.74
2459 7881 9.195411 AGCATAACACATTGTTTCACAAAATAG 57.805 29.630 0.00 0.00 41.96 1.73
2479 7901 4.380843 TTCCAAGGGAACAAGAGCATAA 57.619 40.909 0.00 0.00 36.71 1.90
2480 7902 4.335416 CTTTCCAAGGGAACAAGAGCATA 58.665 43.478 0.00 0.00 41.87 3.14
2496 7918 1.753903 TGGGGAGATTGTCCTTTCCA 58.246 50.000 0.00 0.00 46.06 3.53
2498 7920 3.441500 ACTTGGGGAGATTGTCCTTTC 57.558 47.619 0.00 0.00 46.06 2.62
2502 7924 2.879103 TCAACTTGGGGAGATTGTCC 57.121 50.000 0.00 0.00 46.10 4.02
2507 7929 4.387026 TCAACAATCAACTTGGGGAGAT 57.613 40.909 0.00 0.00 39.30 2.75
2508 7930 3.874383 TCAACAATCAACTTGGGGAGA 57.126 42.857 0.00 0.00 39.30 3.71
2509 7931 3.828451 ACATCAACAATCAACTTGGGGAG 59.172 43.478 0.00 0.00 39.30 4.30
2510 7932 3.826157 GACATCAACAATCAACTTGGGGA 59.174 43.478 0.00 0.00 39.30 4.81
2512 7934 3.501828 TCGACATCAACAATCAACTTGGG 59.498 43.478 0.00 0.00 39.30 4.12
2550 10161 8.875168 AGTATCCTTCAGCTATACTTTTGCTAT 58.125 33.333 1.01 0.00 33.66 2.97
2552 10163 7.130681 AGTATCCTTCAGCTATACTTTTGCT 57.869 36.000 1.01 0.00 33.66 3.91
2566 10177 4.616553 TGGCTGGTAAGTAGTATCCTTCA 58.383 43.478 0.00 0.00 0.00 3.02
2576 10187 2.176889 GGTGACTCTGGCTGGTAAGTA 58.823 52.381 0.00 0.00 0.00 2.24
2583 10194 3.027412 ACTACATAGGTGACTCTGGCTG 58.973 50.000 0.00 0.00 43.67 4.85
2585 10196 3.195825 ACAACTACATAGGTGACTCTGGC 59.804 47.826 10.93 0.00 43.66 4.85
2587 10198 9.517609 GTTATTACAACTACATAGGTGACTCTG 57.482 37.037 10.93 0.00 43.66 3.35
2592 10203 7.259882 CACGGTTATTACAACTACATAGGTGA 58.740 38.462 10.93 0.00 43.66 4.02
2595 10206 6.808829 TCCACGGTTATTACAACTACATAGG 58.191 40.000 0.00 0.00 0.00 2.57
2604 10215 5.670792 AGAGTCATCCACGGTTATTACAA 57.329 39.130 0.00 0.00 0.00 2.41
2640 10251 8.995220 GTCTAGACATCTAGGATAATATAGCGG 58.005 40.741 18.20 0.00 44.60 5.52
2641 10252 8.705134 CGTCTAGACATCTAGGATAATATAGCG 58.295 40.741 22.37 0.00 44.60 4.26
2642 10253 9.767228 TCGTCTAGACATCTAGGATAATATAGC 57.233 37.037 22.37 0.00 44.60 2.97
2645 10256 9.787435 GGATCGTCTAGACATCTAGGATAATAT 57.213 37.037 22.37 0.00 44.60 1.28
2646 10257 8.994500 AGGATCGTCTAGACATCTAGGATAATA 58.006 37.037 22.37 0.00 44.60 0.98
2647 10258 7.867921 AGGATCGTCTAGACATCTAGGATAAT 58.132 38.462 22.37 5.53 44.60 1.28
2648 10259 7.260387 AGGATCGTCTAGACATCTAGGATAA 57.740 40.000 22.37 1.32 44.60 1.75
2650 10261 5.772393 AGGATCGTCTAGACATCTAGGAT 57.228 43.478 22.37 14.62 44.60 3.24
2651 10262 5.071923 TCAAGGATCGTCTAGACATCTAGGA 59.928 44.000 22.37 10.57 44.60 2.94
2652 10263 5.309638 TCAAGGATCGTCTAGACATCTAGG 58.690 45.833 22.37 14.69 44.60 3.02
2653 10264 6.869315 TTCAAGGATCGTCTAGACATCTAG 57.131 41.667 22.37 9.32 45.57 2.43
2654 10265 6.829298 ACTTTCAAGGATCGTCTAGACATCTA 59.171 38.462 22.37 5.30 0.00 1.98
2655 10266 5.654650 ACTTTCAAGGATCGTCTAGACATCT 59.345 40.000 22.37 10.36 0.00 2.90
2656 10267 5.897050 ACTTTCAAGGATCGTCTAGACATC 58.103 41.667 22.37 20.41 0.00 3.06
2657 10268 5.923733 ACTTTCAAGGATCGTCTAGACAT 57.076 39.130 22.37 14.21 0.00 3.06
2658 10269 5.723672 AACTTTCAAGGATCGTCTAGACA 57.276 39.130 22.37 10.16 0.00 3.41
2659 10270 8.596380 CATAAAACTTTCAAGGATCGTCTAGAC 58.404 37.037 13.18 13.18 0.00 2.59
2660 10271 8.311836 ACATAAAACTTTCAAGGATCGTCTAGA 58.688 33.333 0.00 0.00 0.00 2.43
2661 10272 8.383619 CACATAAAACTTTCAAGGATCGTCTAG 58.616 37.037 0.00 0.00 0.00 2.43
2662 10273 8.092068 TCACATAAAACTTTCAAGGATCGTCTA 58.908 33.333 0.00 0.00 0.00 2.59
2663 10274 6.934645 TCACATAAAACTTTCAAGGATCGTCT 59.065 34.615 0.00 0.00 0.00 4.18
2695 10308 0.744414 AAGAGCCGTATGCATTGCGT 60.744 50.000 3.54 8.66 44.83 5.24
2697 10310 2.614057 AGTAAAGAGCCGTATGCATTGC 59.386 45.455 3.54 5.94 44.83 3.56
2741 10354 3.745975 CGTCGTAATATGCATGGGATTGT 59.254 43.478 10.16 0.00 0.00 2.71
2743 10356 3.745975 CACGTCGTAATATGCATGGGATT 59.254 43.478 10.16 3.82 0.00 3.01
2752 10365 6.032094 AGAGTTACAACCACGTCGTAATATG 58.968 40.000 0.00 0.00 0.00 1.78
2755 10368 4.510038 AGAGTTACAACCACGTCGTAAT 57.490 40.909 0.00 0.00 0.00 1.89
2759 10372 2.982470 GGTTAGAGTTACAACCACGTCG 59.018 50.000 0.00 0.00 43.13 5.12
2760 10373 2.982470 CGGTTAGAGTTACAACCACGTC 59.018 50.000 4.53 0.00 43.70 4.34
2762 10375 2.727798 CACGGTTAGAGTTACAACCACG 59.272 50.000 4.53 0.00 43.70 4.94
2764 10377 4.322198 GGATCACGGTTAGAGTTACAACCA 60.322 45.833 4.53 0.00 43.70 3.67
2774 10387 2.091278 AGAGGGATGGATCACGGTTAGA 60.091 50.000 0.00 0.00 34.73 2.10
2779 10392 2.171448 AGAAAAGAGGGATGGATCACGG 59.829 50.000 0.00 0.00 34.73 4.94
2786 10399 5.363939 GTGAGTATGAGAAAAGAGGGATGG 58.636 45.833 0.00 0.00 0.00 3.51
2788 10401 4.410555 GGGTGAGTATGAGAAAAGAGGGAT 59.589 45.833 0.00 0.00 0.00 3.85
2790 10403 3.519510 TGGGTGAGTATGAGAAAAGAGGG 59.480 47.826 0.00 0.00 0.00 4.30
2812 10425 3.495629 GGGTTAGGGAAGAGAACACGTTT 60.496 47.826 0.00 0.00 0.00 3.60
2814 10427 1.622312 GGGTTAGGGAAGAGAACACGT 59.378 52.381 0.00 0.00 0.00 4.49
2816 10429 3.181448 TGTTGGGTTAGGGAAGAGAACAC 60.181 47.826 0.00 0.00 0.00 3.32
2828 10441 0.250553 TGGAGGCGTTGTTGGGTTAG 60.251 55.000 0.00 0.00 0.00 2.34
2839 10453 2.586648 AAAGAAGGAAATGGAGGCGT 57.413 45.000 0.00 0.00 0.00 5.68
2841 10455 5.440610 TGAGATAAAGAAGGAAATGGAGGC 58.559 41.667 0.00 0.00 0.00 4.70
2847 10461 7.777440 GTGGGAAGATGAGATAAAGAAGGAAAT 59.223 37.037 0.00 0.00 0.00 2.17
2853 10467 8.772250 ACTATTGTGGGAAGATGAGATAAAGAA 58.228 33.333 0.00 0.00 0.00 2.52
2854 10468 8.206867 CACTATTGTGGGAAGATGAGATAAAGA 58.793 37.037 0.00 0.00 40.33 2.52
2872 10486 6.049955 ACACAGTTATAGGTGCACTATTGT 57.950 37.500 17.98 10.50 42.36 2.71
2874 10488 6.106673 GTGACACAGTTATAGGTGCACTATT 58.893 40.000 17.98 5.56 42.36 1.73
2875 10489 5.395324 GGTGACACAGTTATAGGTGCACTAT 60.395 44.000 17.98 14.14 44.48 2.12
2877 10491 3.306780 GGTGACACAGTTATAGGTGCACT 60.307 47.826 17.98 5.41 39.61 4.40
2879 10493 2.353307 CGGTGACACAGTTATAGGTGCA 60.353 50.000 8.08 0.00 38.57 4.57
2882 10496 2.895404 ACACGGTGACACAGTTATAGGT 59.105 45.455 16.29 1.09 0.00 3.08
2884 10498 4.166523 CTGACACGGTGACACAGTTATAG 58.833 47.826 16.29 4.06 0.00 1.31
2895 10509 0.039764 AGATCTCCCTGACACGGTGA 59.960 55.000 16.29 0.00 0.00 4.02
2897 10511 1.410365 CCTAGATCTCCCTGACACGGT 60.410 57.143 0.00 0.00 0.00 4.83
2899 10513 0.671251 GCCTAGATCTCCCTGACACG 59.329 60.000 0.00 0.00 0.00 4.49
2900 10514 1.960689 GAGCCTAGATCTCCCTGACAC 59.039 57.143 0.00 0.00 0.00 3.67
2904 10518 1.202879 ACTCGAGCCTAGATCTCCCTG 60.203 57.143 13.61 0.00 0.00 4.45
2906 10520 1.243902 CACTCGAGCCTAGATCTCCC 58.756 60.000 13.61 0.00 0.00 4.30
2929 10543 4.025040 TGATCTCCTTTTGTGCAGTGAT 57.975 40.909 0.00 0.00 0.00 3.06
2949 10563 1.003580 ACAGCCACCCACTCACTATTG 59.996 52.381 0.00 0.00 0.00 1.90
2959 10573 2.837291 GGTTGCAACAGCCACCCA 60.837 61.111 29.55 0.00 37.94 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.