Multiple sequence alignment - TraesCS2B01G566200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G566200 | chr2B | 100.000 | 2549 | 0 | 0 | 1 | 2549 | 757362201 | 757364749 | 0 | 4708 |
1 | TraesCS2B01G566200 | chr2B | 97.187 | 1991 | 38 | 8 | 562 | 2549 | 776222962 | 776224937 | 0 | 3350 |
2 | TraesCS2B01G566200 | chr2B | 97.097 | 1998 | 38 | 10 | 555 | 2549 | 781094236 | 781096216 | 0 | 3350 |
3 | TraesCS2B01G566200 | chr2B | 96.750 | 2000 | 43 | 10 | 557 | 2549 | 788228852 | 788230836 | 0 | 3314 |
4 | TraesCS2B01G566200 | chr2B | 96.678 | 1987 | 47 | 8 | 553 | 2535 | 4739868 | 4741839 | 0 | 3286 |
5 | TraesCS2B01G566200 | chr6A | 97.388 | 1991 | 37 | 5 | 561 | 2549 | 617222870 | 617220893 | 0 | 3374 |
6 | TraesCS2B01G566200 | chr6A | 97.050 | 2000 | 43 | 6 | 553 | 2549 | 533982332 | 533980346 | 0 | 3352 |
7 | TraesCS2B01G566200 | chr6B | 97.289 | 1992 | 38 | 6 | 561 | 2549 | 30026527 | 30028505 | 0 | 3365 |
8 | TraesCS2B01G566200 | chr4A | 97.186 | 1990 | 42 | 4 | 562 | 2549 | 36562913 | 36564890 | 0 | 3352 |
9 | TraesCS2B01G566200 | chr4A | 96.631 | 1989 | 46 | 8 | 554 | 2535 | 661625053 | 661623079 | 0 | 3282 |
10 | TraesCS2B01G566200 | chr4B | 97.139 | 1992 | 37 | 9 | 562 | 2549 | 368430367 | 368428392 | 0 | 3345 |
11 | TraesCS2B01G566200 | chr3A | 97.137 | 1991 | 38 | 10 | 562 | 2549 | 54951918 | 54953892 | 0 | 3343 |
12 | TraesCS2B01G566200 | chr3A | 96.991 | 1994 | 40 | 9 | 561 | 2549 | 9952657 | 9954635 | 0 | 3332 |
13 | TraesCS2B01G566200 | chr3A | 96.895 | 1997 | 43 | 8 | 557 | 2549 | 77771310 | 77773291 | 0 | 3326 |
14 | TraesCS2B01G566200 | chr1B | 97.085 | 1990 | 42 | 6 | 562 | 2549 | 42162338 | 42160363 | 0 | 3339 |
15 | TraesCS2B01G566200 | chr5B | 96.988 | 1992 | 44 | 5 | 562 | 2549 | 185022644 | 185024623 | 0 | 3332 |
16 | TraesCS2B01G566200 | chr7B | 96.700 | 2000 | 44 | 9 | 554 | 2549 | 743805897 | 743807878 | 0 | 3308 |
17 | TraesCS2B01G566200 | chr7B | 90.955 | 1194 | 66 | 11 | 541 | 1725 | 734145266 | 734146426 | 0 | 1568 |
18 | TraesCS2B01G566200 | chr2A | 97.055 | 1732 | 37 | 6 | 557 | 2286 | 613866453 | 613868172 | 0 | 2904 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G566200 | chr2B | 757362201 | 757364749 | 2548 | False | 4708 | 4708 | 100.000 | 1 | 2549 | 1 | chr2B.!!$F2 | 2548 |
1 | TraesCS2B01G566200 | chr2B | 776222962 | 776224937 | 1975 | False | 3350 | 3350 | 97.187 | 562 | 2549 | 1 | chr2B.!!$F3 | 1987 |
2 | TraesCS2B01G566200 | chr2B | 781094236 | 781096216 | 1980 | False | 3350 | 3350 | 97.097 | 555 | 2549 | 1 | chr2B.!!$F4 | 1994 |
3 | TraesCS2B01G566200 | chr2B | 788228852 | 788230836 | 1984 | False | 3314 | 3314 | 96.750 | 557 | 2549 | 1 | chr2B.!!$F5 | 1992 |
4 | TraesCS2B01G566200 | chr2B | 4739868 | 4741839 | 1971 | False | 3286 | 3286 | 96.678 | 553 | 2535 | 1 | chr2B.!!$F1 | 1982 |
5 | TraesCS2B01G566200 | chr6A | 617220893 | 617222870 | 1977 | True | 3374 | 3374 | 97.388 | 561 | 2549 | 1 | chr6A.!!$R2 | 1988 |
6 | TraesCS2B01G566200 | chr6A | 533980346 | 533982332 | 1986 | True | 3352 | 3352 | 97.050 | 553 | 2549 | 1 | chr6A.!!$R1 | 1996 |
7 | TraesCS2B01G566200 | chr6B | 30026527 | 30028505 | 1978 | False | 3365 | 3365 | 97.289 | 561 | 2549 | 1 | chr6B.!!$F1 | 1988 |
8 | TraesCS2B01G566200 | chr4A | 36562913 | 36564890 | 1977 | False | 3352 | 3352 | 97.186 | 562 | 2549 | 1 | chr4A.!!$F1 | 1987 |
9 | TraesCS2B01G566200 | chr4A | 661623079 | 661625053 | 1974 | True | 3282 | 3282 | 96.631 | 554 | 2535 | 1 | chr4A.!!$R1 | 1981 |
10 | TraesCS2B01G566200 | chr4B | 368428392 | 368430367 | 1975 | True | 3345 | 3345 | 97.139 | 562 | 2549 | 1 | chr4B.!!$R1 | 1987 |
11 | TraesCS2B01G566200 | chr3A | 54951918 | 54953892 | 1974 | False | 3343 | 3343 | 97.137 | 562 | 2549 | 1 | chr3A.!!$F2 | 1987 |
12 | TraesCS2B01G566200 | chr3A | 9952657 | 9954635 | 1978 | False | 3332 | 3332 | 96.991 | 561 | 2549 | 1 | chr3A.!!$F1 | 1988 |
13 | TraesCS2B01G566200 | chr3A | 77771310 | 77773291 | 1981 | False | 3326 | 3326 | 96.895 | 557 | 2549 | 1 | chr3A.!!$F3 | 1992 |
14 | TraesCS2B01G566200 | chr1B | 42160363 | 42162338 | 1975 | True | 3339 | 3339 | 97.085 | 562 | 2549 | 1 | chr1B.!!$R1 | 1987 |
15 | TraesCS2B01G566200 | chr5B | 185022644 | 185024623 | 1979 | False | 3332 | 3332 | 96.988 | 562 | 2549 | 1 | chr5B.!!$F1 | 1987 |
16 | TraesCS2B01G566200 | chr7B | 743805897 | 743807878 | 1981 | False | 3308 | 3308 | 96.700 | 554 | 2549 | 1 | chr7B.!!$F2 | 1995 |
17 | TraesCS2B01G566200 | chr7B | 734145266 | 734146426 | 1160 | False | 1568 | 1568 | 90.955 | 541 | 1725 | 1 | chr7B.!!$F1 | 1184 |
18 | TraesCS2B01G566200 | chr2A | 613866453 | 613868172 | 1719 | False | 2904 | 2904 | 97.055 | 557 | 2286 | 1 | chr2A.!!$F1 | 1729 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
85 | 86 | 0.037697 | TTGGCAGAAGTATGACGCGT | 60.038 | 50.0 | 13.85 | 13.85 | 0.0 | 6.01 | F |
101 | 102 | 0.247301 | GCGTGCGTACATCTGCTTTC | 60.247 | 55.0 | 4.09 | 0.00 | 0.0 | 2.62 | F |
102 | 103 | 0.370273 | CGTGCGTACATCTGCTTTCC | 59.630 | 55.0 | 4.09 | 0.00 | 0.0 | 3.13 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1381 | 1389 | 0.104855 | TCTCTGTCAGTGCGTGCTTT | 59.895 | 50.000 | 0.0 | 0.0 | 0.00 | 3.51 | R |
1426 | 1437 | 4.899502 | TCAAGCTTCCTAACCTTCTTCTG | 58.100 | 43.478 | 0.0 | 0.0 | 0.00 | 3.02 | R |
2306 | 2333 | 0.865111 | TGCAAACATTCACGGTCTCG | 59.135 | 50.000 | 0.0 | 0.0 | 43.02 | 4.04 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 2.183478 | AATCGTGTTGCACCTGATCA | 57.817 | 45.000 | 0.00 | 0.00 | 0.00 | 2.92 |
20 | 21 | 2.408271 | ATCGTGTTGCACCTGATCAT | 57.592 | 45.000 | 0.00 | 0.00 | 0.00 | 2.45 |
21 | 22 | 1.441738 | TCGTGTTGCACCTGATCATG | 58.558 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
22 | 23 | 1.159285 | CGTGTTGCACCTGATCATGT | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
24 | 25 | 2.938451 | CGTGTTGCACCTGATCATGTAT | 59.062 | 45.455 | 3.11 | 0.00 | 0.00 | 2.29 |
25 | 26 | 3.242511 | CGTGTTGCACCTGATCATGTATG | 60.243 | 47.826 | 3.11 | 0.00 | 0.00 | 2.39 |
26 | 27 | 3.940852 | GTGTTGCACCTGATCATGTATGA | 59.059 | 43.478 | 3.11 | 0.00 | 41.70 | 2.15 |
27 | 28 | 4.034858 | GTGTTGCACCTGATCATGTATGAG | 59.965 | 45.833 | 3.11 | 0.00 | 40.64 | 2.90 |
28 | 29 | 4.194640 | GTTGCACCTGATCATGTATGAGT | 58.805 | 43.478 | 3.11 | 0.00 | 40.64 | 3.41 |
29 | 30 | 4.492494 | TGCACCTGATCATGTATGAGTT | 57.508 | 40.909 | 3.11 | 0.00 | 40.64 | 3.01 |
30 | 31 | 4.847198 | TGCACCTGATCATGTATGAGTTT | 58.153 | 39.130 | 3.11 | 0.00 | 40.64 | 2.66 |
31 | 32 | 4.637091 | TGCACCTGATCATGTATGAGTTTG | 59.363 | 41.667 | 3.11 | 0.00 | 40.64 | 2.93 |
32 | 33 | 4.637534 | GCACCTGATCATGTATGAGTTTGT | 59.362 | 41.667 | 3.11 | 0.00 | 40.64 | 2.83 |
33 | 34 | 5.448225 | GCACCTGATCATGTATGAGTTTGTG | 60.448 | 44.000 | 3.11 | 6.80 | 40.64 | 3.33 |
34 | 35 | 5.876460 | CACCTGATCATGTATGAGTTTGTGA | 59.124 | 40.000 | 3.11 | 0.00 | 40.64 | 3.58 |
35 | 36 | 6.036844 | CACCTGATCATGTATGAGTTTGTGAG | 59.963 | 42.308 | 3.11 | 0.00 | 40.64 | 3.51 |
36 | 37 | 5.526479 | CCTGATCATGTATGAGTTTGTGAGG | 59.474 | 44.000 | 0.00 | 0.00 | 40.64 | 3.86 |
37 | 38 | 6.053632 | TGATCATGTATGAGTTTGTGAGGT | 57.946 | 37.500 | 0.00 | 0.00 | 40.64 | 3.85 |
38 | 39 | 5.876460 | TGATCATGTATGAGTTTGTGAGGTG | 59.124 | 40.000 | 0.00 | 0.00 | 40.64 | 4.00 |
39 | 40 | 5.227569 | TCATGTATGAGTTTGTGAGGTGT | 57.772 | 39.130 | 0.00 | 0.00 | 32.11 | 4.16 |
40 | 41 | 6.353404 | TCATGTATGAGTTTGTGAGGTGTA | 57.647 | 37.500 | 0.00 | 0.00 | 32.11 | 2.90 |
41 | 42 | 6.946340 | TCATGTATGAGTTTGTGAGGTGTAT | 58.054 | 36.000 | 0.00 | 0.00 | 32.11 | 2.29 |
42 | 43 | 8.073467 | TCATGTATGAGTTTGTGAGGTGTATA | 57.927 | 34.615 | 0.00 | 0.00 | 32.11 | 1.47 |
43 | 44 | 7.979537 | TCATGTATGAGTTTGTGAGGTGTATAC | 59.020 | 37.037 | 0.00 | 0.00 | 32.11 | 1.47 |
44 | 45 | 7.234661 | TGTATGAGTTTGTGAGGTGTATACA | 57.765 | 36.000 | 0.08 | 0.08 | 0.00 | 2.29 |
45 | 46 | 7.672240 | TGTATGAGTTTGTGAGGTGTATACAA | 58.328 | 34.615 | 7.25 | 0.00 | 32.93 | 2.41 |
46 | 47 | 7.601130 | TGTATGAGTTTGTGAGGTGTATACAAC | 59.399 | 37.037 | 13.28 | 13.28 | 34.38 | 3.32 |
48 | 49 | 7.292713 | TGAGTTTGTGAGGTGTATACAACTA | 57.707 | 36.000 | 23.26 | 5.57 | 45.35 | 2.24 |
49 | 50 | 7.903145 | TGAGTTTGTGAGGTGTATACAACTAT | 58.097 | 34.615 | 23.26 | 2.56 | 45.35 | 2.12 |
50 | 51 | 7.817478 | TGAGTTTGTGAGGTGTATACAACTATG | 59.183 | 37.037 | 23.26 | 0.00 | 45.35 | 2.23 |
51 | 52 | 6.594159 | AGTTTGTGAGGTGTATACAACTATGC | 59.406 | 38.462 | 23.26 | 15.62 | 45.35 | 3.14 |
52 | 53 | 5.669164 | TGTGAGGTGTATACAACTATGCA | 57.331 | 39.130 | 23.26 | 17.77 | 45.35 | 3.96 |
53 | 54 | 6.233905 | TGTGAGGTGTATACAACTATGCAT | 57.766 | 37.500 | 23.26 | 3.79 | 45.35 | 3.96 |
54 | 55 | 6.649155 | TGTGAGGTGTATACAACTATGCATT | 58.351 | 36.000 | 23.26 | 0.00 | 45.35 | 3.56 |
55 | 56 | 7.109501 | TGTGAGGTGTATACAACTATGCATTT | 58.890 | 34.615 | 23.26 | 0.00 | 45.35 | 2.32 |
56 | 57 | 7.609918 | TGTGAGGTGTATACAACTATGCATTTT | 59.390 | 33.333 | 23.26 | 0.00 | 45.35 | 1.82 |
57 | 58 | 8.458843 | GTGAGGTGTATACAACTATGCATTTTT | 58.541 | 33.333 | 23.26 | 0.00 | 45.35 | 1.94 |
80 | 81 | 6.662865 | TTTTCCATTTTGGCAGAAGTATGA | 57.337 | 33.333 | 0.00 | 0.00 | 37.47 | 2.15 |
81 | 82 | 5.643379 | TTCCATTTTGGCAGAAGTATGAC | 57.357 | 39.130 | 0.00 | 0.00 | 37.47 | 3.06 |
82 | 83 | 3.689161 | TCCATTTTGGCAGAAGTATGACG | 59.311 | 43.478 | 0.00 | 0.00 | 37.47 | 4.35 |
83 | 84 | 3.429085 | CATTTTGGCAGAAGTATGACGC | 58.571 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
84 | 85 | 1.075542 | TTTGGCAGAAGTATGACGCG | 58.924 | 50.000 | 3.53 | 3.53 | 0.00 | 6.01 |
85 | 86 | 0.037697 | TTGGCAGAAGTATGACGCGT | 60.038 | 50.000 | 13.85 | 13.85 | 0.00 | 6.01 |
86 | 87 | 0.735978 | TGGCAGAAGTATGACGCGTG | 60.736 | 55.000 | 20.70 | 0.00 | 0.00 | 5.34 |
87 | 88 | 1.345176 | GCAGAAGTATGACGCGTGC | 59.655 | 57.895 | 20.70 | 6.64 | 0.00 | 5.34 |
88 | 89 | 1.625870 | CAGAAGTATGACGCGTGCG | 59.374 | 57.895 | 20.70 | 13.39 | 46.03 | 5.34 |
98 | 99 | 2.880879 | CGCGTGCGTACATCTGCT | 60.881 | 61.111 | 6.00 | 0.00 | 34.35 | 4.24 |
99 | 100 | 2.444624 | CGCGTGCGTACATCTGCTT | 61.445 | 57.895 | 6.00 | 0.00 | 34.35 | 3.91 |
100 | 101 | 1.787847 | GCGTGCGTACATCTGCTTT | 59.212 | 52.632 | 4.09 | 0.00 | 0.00 | 3.51 |
101 | 102 | 0.247301 | GCGTGCGTACATCTGCTTTC | 60.247 | 55.000 | 4.09 | 0.00 | 0.00 | 2.62 |
102 | 103 | 0.370273 | CGTGCGTACATCTGCTTTCC | 59.630 | 55.000 | 4.09 | 0.00 | 0.00 | 3.13 |
103 | 104 | 1.438651 | GTGCGTACATCTGCTTTCCA | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
104 | 105 | 1.804151 | GTGCGTACATCTGCTTTCCAA | 59.196 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
105 | 106 | 2.225491 | GTGCGTACATCTGCTTTCCAAA | 59.775 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
106 | 107 | 3.081061 | TGCGTACATCTGCTTTCCAAAT | 58.919 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
107 | 108 | 3.505680 | TGCGTACATCTGCTTTCCAAATT | 59.494 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
108 | 109 | 4.697828 | TGCGTACATCTGCTTTCCAAATTA | 59.302 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
109 | 110 | 5.356751 | TGCGTACATCTGCTTTCCAAATTAT | 59.643 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
110 | 111 | 6.540551 | TGCGTACATCTGCTTTCCAAATTATA | 59.459 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
111 | 112 | 7.228507 | TGCGTACATCTGCTTTCCAAATTATAT | 59.771 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
112 | 113 | 7.535258 | GCGTACATCTGCTTTCCAAATTATATG | 59.465 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
113 | 114 | 8.773645 | CGTACATCTGCTTTCCAAATTATATGA | 58.226 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
119 | 120 | 9.208022 | TCTGCTTTCCAAATTATATGATACTCG | 57.792 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
120 | 121 | 8.902540 | TGCTTTCCAAATTATATGATACTCGT | 57.097 | 30.769 | 0.00 | 0.00 | 0.00 | 4.18 |
121 | 122 | 9.337396 | TGCTTTCCAAATTATATGATACTCGTT | 57.663 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
130 | 131 | 9.503399 | AATTATATGATACTCGTTTCTTTCCCC | 57.497 | 33.333 | 0.00 | 0.00 | 0.00 | 4.81 |
131 | 132 | 3.241067 | TGATACTCGTTTCTTTCCCCG | 57.759 | 47.619 | 0.00 | 0.00 | 0.00 | 5.73 |
132 | 133 | 2.827322 | TGATACTCGTTTCTTTCCCCGA | 59.173 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
133 | 134 | 3.258872 | TGATACTCGTTTCTTTCCCCGAA | 59.741 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
134 | 135 | 2.853235 | ACTCGTTTCTTTCCCCGAAT | 57.147 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
135 | 136 | 3.967332 | ACTCGTTTCTTTCCCCGAATA | 57.033 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
136 | 137 | 3.858247 | ACTCGTTTCTTTCCCCGAATAG | 58.142 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
137 | 138 | 3.260128 | ACTCGTTTCTTTCCCCGAATAGT | 59.740 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
138 | 139 | 3.853475 | TCGTTTCTTTCCCCGAATAGTC | 58.147 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
154 | 155 | 7.783276 | CGAATAGTCGGAAATCTGTAGTATG | 57.217 | 40.000 | 4.32 | 0.00 | 43.81 | 2.39 |
155 | 156 | 7.361127 | CGAATAGTCGGAAATCTGTAGTATGT | 58.639 | 38.462 | 4.32 | 0.00 | 43.81 | 2.29 |
156 | 157 | 7.861372 | CGAATAGTCGGAAATCTGTAGTATGTT | 59.139 | 37.037 | 4.32 | 0.00 | 43.81 | 2.71 |
161 | 162 | 9.352191 | AGTCGGAAATCTGTAGTATGTTATAGT | 57.648 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
162 | 163 | 9.962783 | GTCGGAAATCTGTAGTATGTTATAGTT | 57.037 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
175 | 176 | 8.429641 | AGTATGTTATAGTTTGTATGGGAGTGG | 58.570 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
176 | 177 | 6.630203 | TGTTATAGTTTGTATGGGAGTGGT | 57.370 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
177 | 178 | 7.736881 | TGTTATAGTTTGTATGGGAGTGGTA | 57.263 | 36.000 | 0.00 | 0.00 | 0.00 | 3.25 |
178 | 179 | 8.148437 | TGTTATAGTTTGTATGGGAGTGGTAA | 57.852 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
179 | 180 | 8.604184 | TGTTATAGTTTGTATGGGAGTGGTAAA | 58.396 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
180 | 181 | 8.886719 | GTTATAGTTTGTATGGGAGTGGTAAAC | 58.113 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
181 | 182 | 5.578157 | AGTTTGTATGGGAGTGGTAAACT | 57.422 | 39.130 | 0.00 | 0.00 | 43.85 | 2.66 |
182 | 183 | 5.948842 | AGTTTGTATGGGAGTGGTAAACTT | 58.051 | 37.500 | 0.00 | 0.00 | 40.07 | 2.66 |
183 | 184 | 5.768164 | AGTTTGTATGGGAGTGGTAAACTTG | 59.232 | 40.000 | 0.00 | 0.00 | 40.07 | 3.16 |
184 | 185 | 4.986054 | TGTATGGGAGTGGTAAACTTGT | 57.014 | 40.909 | 0.00 | 0.00 | 40.07 | 3.16 |
185 | 186 | 5.313280 | TGTATGGGAGTGGTAAACTTGTT | 57.687 | 39.130 | 0.00 | 0.00 | 40.07 | 2.83 |
186 | 187 | 5.067273 | TGTATGGGAGTGGTAAACTTGTTG | 58.933 | 41.667 | 0.00 | 0.00 | 40.07 | 3.33 |
187 | 188 | 3.655615 | TGGGAGTGGTAAACTTGTTGT | 57.344 | 42.857 | 0.00 | 0.00 | 40.07 | 3.32 |
188 | 189 | 4.774660 | TGGGAGTGGTAAACTTGTTGTA | 57.225 | 40.909 | 0.00 | 0.00 | 40.07 | 2.41 |
189 | 190 | 5.113446 | TGGGAGTGGTAAACTTGTTGTAA | 57.887 | 39.130 | 0.00 | 0.00 | 40.07 | 2.41 |
190 | 191 | 4.883006 | TGGGAGTGGTAAACTTGTTGTAAC | 59.117 | 41.667 | 0.00 | 0.00 | 40.07 | 2.50 |
191 | 192 | 5.128205 | GGGAGTGGTAAACTTGTTGTAACT | 58.872 | 41.667 | 0.00 | 0.00 | 40.07 | 2.24 |
192 | 193 | 5.008316 | GGGAGTGGTAAACTTGTTGTAACTG | 59.992 | 44.000 | 0.00 | 0.00 | 40.07 | 3.16 |
193 | 194 | 5.494632 | AGTGGTAAACTTGTTGTAACTGC | 57.505 | 39.130 | 0.00 | 0.00 | 34.57 | 4.40 |
194 | 195 | 5.190677 | AGTGGTAAACTTGTTGTAACTGCT | 58.809 | 37.500 | 0.00 | 0.00 | 34.57 | 4.24 |
195 | 196 | 6.350906 | AGTGGTAAACTTGTTGTAACTGCTA | 58.649 | 36.000 | 0.00 | 0.00 | 34.57 | 3.49 |
196 | 197 | 6.996282 | AGTGGTAAACTTGTTGTAACTGCTAT | 59.004 | 34.615 | 0.00 | 0.00 | 34.57 | 2.97 |
197 | 198 | 8.152246 | AGTGGTAAACTTGTTGTAACTGCTATA | 58.848 | 33.333 | 0.00 | 0.00 | 34.57 | 1.31 |
198 | 199 | 8.440833 | GTGGTAAACTTGTTGTAACTGCTATAG | 58.559 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
199 | 200 | 7.118680 | TGGTAAACTTGTTGTAACTGCTATAGC | 59.881 | 37.037 | 18.18 | 18.18 | 42.50 | 2.97 |
200 | 201 | 6.496338 | AAACTTGTTGTAACTGCTATAGCC | 57.504 | 37.500 | 21.84 | 6.62 | 41.18 | 3.93 |
201 | 202 | 5.422214 | ACTTGTTGTAACTGCTATAGCCT | 57.578 | 39.130 | 21.84 | 9.03 | 41.18 | 4.58 |
202 | 203 | 5.178797 | ACTTGTTGTAACTGCTATAGCCTG | 58.821 | 41.667 | 21.84 | 16.18 | 41.18 | 4.85 |
203 | 204 | 4.819105 | TGTTGTAACTGCTATAGCCTGT | 57.181 | 40.909 | 21.84 | 16.80 | 41.18 | 4.00 |
204 | 205 | 5.925506 | TGTTGTAACTGCTATAGCCTGTA | 57.074 | 39.130 | 21.84 | 8.09 | 41.18 | 2.74 |
205 | 206 | 6.288941 | TGTTGTAACTGCTATAGCCTGTAA | 57.711 | 37.500 | 21.84 | 9.26 | 41.18 | 2.41 |
206 | 207 | 6.884832 | TGTTGTAACTGCTATAGCCTGTAAT | 58.115 | 36.000 | 21.84 | 9.23 | 41.18 | 1.89 |
207 | 208 | 6.984474 | TGTTGTAACTGCTATAGCCTGTAATC | 59.016 | 38.462 | 21.84 | 13.28 | 41.18 | 1.75 |
208 | 209 | 6.978674 | TGTAACTGCTATAGCCTGTAATCT | 57.021 | 37.500 | 21.84 | 8.30 | 41.18 | 2.40 |
209 | 210 | 6.749139 | TGTAACTGCTATAGCCTGTAATCTG | 58.251 | 40.000 | 21.84 | 3.86 | 41.18 | 2.90 |
210 | 211 | 5.878406 | AACTGCTATAGCCTGTAATCTGT | 57.122 | 39.130 | 21.84 | 2.64 | 41.18 | 3.41 |
211 | 212 | 5.878406 | ACTGCTATAGCCTGTAATCTGTT | 57.122 | 39.130 | 21.84 | 0.00 | 41.18 | 3.16 |
212 | 213 | 6.240549 | ACTGCTATAGCCTGTAATCTGTTT | 57.759 | 37.500 | 21.84 | 0.00 | 41.18 | 2.83 |
213 | 214 | 6.284459 | ACTGCTATAGCCTGTAATCTGTTTC | 58.716 | 40.000 | 21.84 | 0.00 | 41.18 | 2.78 |
214 | 215 | 5.611374 | TGCTATAGCCTGTAATCTGTTTCC | 58.389 | 41.667 | 21.84 | 0.00 | 41.18 | 3.13 |
215 | 216 | 4.998033 | GCTATAGCCTGTAATCTGTTTCCC | 59.002 | 45.833 | 14.13 | 0.00 | 34.31 | 3.97 |
216 | 217 | 2.403252 | AGCCTGTAATCTGTTTCCCG | 57.597 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
217 | 218 | 1.628846 | AGCCTGTAATCTGTTTCCCGT | 59.371 | 47.619 | 0.00 | 0.00 | 0.00 | 5.28 |
218 | 219 | 1.737793 | GCCTGTAATCTGTTTCCCGTG | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
219 | 220 | 2.874457 | GCCTGTAATCTGTTTCCCGTGT | 60.874 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
220 | 221 | 3.408634 | CCTGTAATCTGTTTCCCGTGTT | 58.591 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
221 | 222 | 3.818773 | CCTGTAATCTGTTTCCCGTGTTT | 59.181 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
222 | 223 | 4.277423 | CCTGTAATCTGTTTCCCGTGTTTT | 59.723 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
223 | 224 | 5.221165 | CCTGTAATCTGTTTCCCGTGTTTTT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
224 | 225 | 6.016943 | CCTGTAATCTGTTTCCCGTGTTTTTA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
225 | 226 | 6.961576 | TGTAATCTGTTTCCCGTGTTTTTAG | 58.038 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
226 | 227 | 6.766944 | TGTAATCTGTTTCCCGTGTTTTTAGA | 59.233 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
227 | 228 | 5.684550 | ATCTGTTTCCCGTGTTTTTAGAC | 57.315 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
228 | 229 | 4.515361 | TCTGTTTCCCGTGTTTTTAGACA | 58.485 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
229 | 230 | 4.942483 | TCTGTTTCCCGTGTTTTTAGACAA | 59.058 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
230 | 231 | 5.591067 | TCTGTTTCCCGTGTTTTTAGACAAT | 59.409 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
231 | 232 | 6.095720 | TCTGTTTCCCGTGTTTTTAGACAATT | 59.904 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
232 | 233 | 7.282675 | TCTGTTTCCCGTGTTTTTAGACAATTA | 59.717 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
233 | 234 | 7.194962 | TGTTTCCCGTGTTTTTAGACAATTAC | 58.805 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
234 | 235 | 7.067251 | TGTTTCCCGTGTTTTTAGACAATTACT | 59.933 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
235 | 236 | 6.548441 | TCCCGTGTTTTTAGACAATTACTG | 57.452 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
236 | 237 | 6.056884 | TCCCGTGTTTTTAGACAATTACTGT | 58.943 | 36.000 | 0.00 | 0.00 | 42.61 | 3.55 |
237 | 238 | 6.543100 | TCCCGTGTTTTTAGACAATTACTGTT | 59.457 | 34.615 | 0.00 | 0.00 | 38.84 | 3.16 |
238 | 239 | 7.067251 | TCCCGTGTTTTTAGACAATTACTGTTT | 59.933 | 33.333 | 0.00 | 0.00 | 38.84 | 2.83 |
239 | 240 | 7.703197 | CCCGTGTTTTTAGACAATTACTGTTTT | 59.297 | 33.333 | 0.00 | 0.00 | 38.84 | 2.43 |
240 | 241 | 9.078753 | CCGTGTTTTTAGACAATTACTGTTTTT | 57.921 | 29.630 | 0.00 | 0.00 | 38.84 | 1.94 |
305 | 306 | 7.736447 | AGTAGATAATCTTGCAAATACCTGC | 57.264 | 36.000 | 0.00 | 0.00 | 42.95 | 4.85 |
330 | 331 | 8.635328 | GCATATGATATGCATATTTGATTCCCA | 58.365 | 33.333 | 27.48 | 11.05 | 45.67 | 4.37 |
333 | 334 | 7.692460 | TGATATGCATATTTGATTCCCAGAC | 57.308 | 36.000 | 20.00 | 3.82 | 0.00 | 3.51 |
334 | 335 | 7.464273 | TGATATGCATATTTGATTCCCAGACT | 58.536 | 34.615 | 20.00 | 0.00 | 0.00 | 3.24 |
335 | 336 | 7.946219 | TGATATGCATATTTGATTCCCAGACTT | 59.054 | 33.333 | 20.00 | 0.00 | 0.00 | 3.01 |
336 | 337 | 5.840243 | TGCATATTTGATTCCCAGACTTG | 57.160 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
337 | 338 | 5.263599 | TGCATATTTGATTCCCAGACTTGT | 58.736 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
338 | 339 | 6.422333 | TGCATATTTGATTCCCAGACTTGTA | 58.578 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
339 | 340 | 6.889177 | TGCATATTTGATTCCCAGACTTGTAA | 59.111 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
340 | 341 | 7.395772 | TGCATATTTGATTCCCAGACTTGTAAA | 59.604 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
341 | 342 | 8.250332 | GCATATTTGATTCCCAGACTTGTAAAA | 58.750 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
347 | 348 | 8.934023 | TGATTCCCAGACTTGTAAAATAAAGT | 57.066 | 30.769 | 0.00 | 0.00 | 39.31 | 2.66 |
393 | 394 | 6.730960 | TTTACAATTACACTCCGTTCATCC | 57.269 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
394 | 395 | 4.280436 | ACAATTACACTCCGTTCATCCA | 57.720 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
395 | 396 | 4.647611 | ACAATTACACTCCGTTCATCCAA | 58.352 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
396 | 397 | 5.067273 | ACAATTACACTCCGTTCATCCAAA | 58.933 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
397 | 398 | 5.048991 | ACAATTACACTCCGTTCATCCAAAC | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
398 | 399 | 2.930826 | ACACTCCGTTCATCCAAACT | 57.069 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
399 | 400 | 2.767505 | ACACTCCGTTCATCCAAACTC | 58.232 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
400 | 401 | 1.726791 | CACTCCGTTCATCCAAACTCG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
401 | 402 | 1.616865 | ACTCCGTTCATCCAAACTCGA | 59.383 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
402 | 403 | 2.036733 | ACTCCGTTCATCCAAACTCGAA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
403 | 404 | 3.262420 | CTCCGTTCATCCAAACTCGAAT | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
404 | 405 | 3.259064 | TCCGTTCATCCAAACTCGAATC | 58.741 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
405 | 406 | 2.029244 | CCGTTCATCCAAACTCGAATCG | 59.971 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
406 | 407 | 2.029244 | CGTTCATCCAAACTCGAATCGG | 59.971 | 50.000 | 1.76 | 0.00 | 0.00 | 4.18 |
407 | 408 | 3.259064 | GTTCATCCAAACTCGAATCGGA | 58.741 | 45.455 | 1.76 | 0.00 | 0.00 | 4.55 |
408 | 409 | 3.603158 | TCATCCAAACTCGAATCGGAA | 57.397 | 42.857 | 1.76 | 0.00 | 0.00 | 4.30 |
409 | 410 | 3.932822 | TCATCCAAACTCGAATCGGAAA | 58.067 | 40.909 | 1.76 | 0.00 | 0.00 | 3.13 |
410 | 411 | 4.513442 | TCATCCAAACTCGAATCGGAAAT | 58.487 | 39.130 | 1.76 | 0.00 | 0.00 | 2.17 |
411 | 412 | 4.941263 | TCATCCAAACTCGAATCGGAAATT | 59.059 | 37.500 | 1.76 | 0.00 | 0.00 | 1.82 |
412 | 413 | 5.414454 | TCATCCAAACTCGAATCGGAAATTT | 59.586 | 36.000 | 1.76 | 0.00 | 0.00 | 1.82 |
413 | 414 | 5.699097 | TCCAAACTCGAATCGGAAATTTT | 57.301 | 34.783 | 1.76 | 0.00 | 0.00 | 1.82 |
414 | 415 | 5.457140 | TCCAAACTCGAATCGGAAATTTTG | 58.543 | 37.500 | 1.76 | 5.75 | 0.00 | 2.44 |
415 | 416 | 4.089923 | CCAAACTCGAATCGGAAATTTTGC | 59.910 | 41.667 | 1.76 | 0.00 | 0.00 | 3.68 |
416 | 417 | 4.766404 | AACTCGAATCGGAAATTTTGCT | 57.234 | 36.364 | 1.76 | 0.00 | 0.00 | 3.91 |
417 | 418 | 4.342352 | ACTCGAATCGGAAATTTTGCTC | 57.658 | 40.909 | 1.76 | 0.00 | 0.00 | 4.26 |
418 | 419 | 3.127030 | ACTCGAATCGGAAATTTTGCTCC | 59.873 | 43.478 | 1.76 | 0.00 | 0.00 | 4.70 |
419 | 420 | 2.422127 | TCGAATCGGAAATTTTGCTCCC | 59.578 | 45.455 | 1.76 | 0.00 | 0.00 | 4.30 |
420 | 421 | 2.479560 | CGAATCGGAAATTTTGCTCCCC | 60.480 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
421 | 422 | 2.532250 | ATCGGAAATTTTGCTCCCCT | 57.468 | 45.000 | 0.00 | 0.00 | 0.00 | 4.79 |
422 | 423 | 2.302587 | TCGGAAATTTTGCTCCCCTT | 57.697 | 45.000 | 0.00 | 0.00 | 0.00 | 3.95 |
423 | 424 | 1.892474 | TCGGAAATTTTGCTCCCCTTG | 59.108 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
424 | 425 | 1.892474 | CGGAAATTTTGCTCCCCTTGA | 59.108 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
425 | 426 | 2.298729 | CGGAAATTTTGCTCCCCTTGAA | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
426 | 427 | 3.055891 | CGGAAATTTTGCTCCCCTTGAAT | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
427 | 428 | 4.563374 | CGGAAATTTTGCTCCCCTTGAATT | 60.563 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
428 | 429 | 4.696877 | GGAAATTTTGCTCCCCTTGAATTG | 59.303 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
429 | 430 | 2.837532 | TTTTGCTCCCCTTGAATTGC | 57.162 | 45.000 | 0.00 | 0.00 | 0.00 | 3.56 |
430 | 431 | 1.714541 | TTTGCTCCCCTTGAATTGCA | 58.285 | 45.000 | 0.00 | 0.00 | 0.00 | 4.08 |
431 | 432 | 1.714541 | TTGCTCCCCTTGAATTGCAA | 58.285 | 45.000 | 0.00 | 0.00 | 37.96 | 4.08 |
444 | 445 | 5.402997 | TGAATTGCAAGTGCCAAATATGA | 57.597 | 34.783 | 3.09 | 0.00 | 41.18 | 2.15 |
445 | 446 | 5.791666 | TGAATTGCAAGTGCCAAATATGAA | 58.208 | 33.333 | 3.09 | 0.00 | 41.18 | 2.57 |
446 | 447 | 5.638657 | TGAATTGCAAGTGCCAAATATGAAC | 59.361 | 36.000 | 3.09 | 0.00 | 41.18 | 3.18 |
447 | 448 | 4.597404 | TTGCAAGTGCCAAATATGAACA | 57.403 | 36.364 | 0.00 | 0.00 | 41.18 | 3.18 |
448 | 449 | 4.177165 | TGCAAGTGCCAAATATGAACAG | 57.823 | 40.909 | 0.00 | 0.00 | 41.18 | 3.16 |
449 | 450 | 3.825585 | TGCAAGTGCCAAATATGAACAGA | 59.174 | 39.130 | 0.00 | 0.00 | 41.18 | 3.41 |
450 | 451 | 4.280425 | TGCAAGTGCCAAATATGAACAGAA | 59.720 | 37.500 | 0.00 | 0.00 | 41.18 | 3.02 |
451 | 452 | 5.221402 | TGCAAGTGCCAAATATGAACAGAAA | 60.221 | 36.000 | 0.00 | 0.00 | 41.18 | 2.52 |
452 | 453 | 5.695816 | GCAAGTGCCAAATATGAACAGAAAA | 59.304 | 36.000 | 0.00 | 0.00 | 34.31 | 2.29 |
453 | 454 | 6.369615 | GCAAGTGCCAAATATGAACAGAAAAT | 59.630 | 34.615 | 0.00 | 0.00 | 34.31 | 1.82 |
454 | 455 | 7.412237 | GCAAGTGCCAAATATGAACAGAAAATC | 60.412 | 37.037 | 0.00 | 0.00 | 34.31 | 2.17 |
455 | 456 | 7.472334 | AGTGCCAAATATGAACAGAAAATCT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
456 | 457 | 7.899973 | AGTGCCAAATATGAACAGAAAATCTT | 58.100 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
457 | 458 | 8.370182 | AGTGCCAAATATGAACAGAAAATCTTT | 58.630 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
458 | 459 | 8.992073 | GTGCCAAATATGAACAGAAAATCTTTT | 58.008 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
459 | 460 | 9.206870 | TGCCAAATATGAACAGAAAATCTTTTC | 57.793 | 29.630 | 7.21 | 7.21 | 45.22 | 2.29 |
460 | 461 | 9.206870 | GCCAAATATGAACAGAAAATCTTTTCA | 57.793 | 29.630 | 15.63 | 10.38 | 44.31 | 2.69 |
489 | 490 | 8.404107 | ACAAATTAAAACTACACCTATGTGCT | 57.596 | 30.769 | 0.00 | 0.00 | 46.86 | 4.40 |
490 | 491 | 9.509956 | ACAAATTAAAACTACACCTATGTGCTA | 57.490 | 29.630 | 0.00 | 0.00 | 46.86 | 3.49 |
493 | 494 | 7.997107 | TTAAAACTACACCTATGTGCTATCG | 57.003 | 36.000 | 0.00 | 0.00 | 46.86 | 2.92 |
494 | 495 | 3.644884 | ACTACACCTATGTGCTATCGC | 57.355 | 47.619 | 0.00 | 0.00 | 46.86 | 4.58 |
495 | 496 | 3.223435 | ACTACACCTATGTGCTATCGCT | 58.777 | 45.455 | 0.00 | 0.00 | 46.86 | 4.93 |
496 | 497 | 3.637229 | ACTACACCTATGTGCTATCGCTT | 59.363 | 43.478 | 0.00 | 0.00 | 46.86 | 4.68 |
497 | 498 | 4.825634 | ACTACACCTATGTGCTATCGCTTA | 59.174 | 41.667 | 0.00 | 0.00 | 46.86 | 3.09 |
498 | 499 | 4.665833 | ACACCTATGTGCTATCGCTTAA | 57.334 | 40.909 | 0.00 | 0.00 | 46.86 | 1.85 |
499 | 500 | 5.018539 | ACACCTATGTGCTATCGCTTAAA | 57.981 | 39.130 | 0.00 | 0.00 | 46.86 | 1.52 |
500 | 501 | 5.424757 | ACACCTATGTGCTATCGCTTAAAA | 58.575 | 37.500 | 0.00 | 0.00 | 46.86 | 1.52 |
501 | 502 | 5.878116 | ACACCTATGTGCTATCGCTTAAAAA | 59.122 | 36.000 | 0.00 | 0.00 | 46.86 | 1.94 |
502 | 503 | 6.183360 | ACACCTATGTGCTATCGCTTAAAAAC | 60.183 | 38.462 | 0.00 | 0.00 | 46.86 | 2.43 |
503 | 504 | 5.006358 | ACCTATGTGCTATCGCTTAAAAACG | 59.994 | 40.000 | 0.00 | 0.00 | 36.97 | 3.60 |
504 | 505 | 3.733024 | TGTGCTATCGCTTAAAAACGG | 57.267 | 42.857 | 0.00 | 0.00 | 36.97 | 4.44 |
505 | 506 | 3.327626 | TGTGCTATCGCTTAAAAACGGA | 58.672 | 40.909 | 0.00 | 0.00 | 36.97 | 4.69 |
506 | 507 | 3.747010 | TGTGCTATCGCTTAAAAACGGAA | 59.253 | 39.130 | 0.00 | 0.00 | 36.97 | 4.30 |
507 | 508 | 4.086574 | GTGCTATCGCTTAAAAACGGAAC | 58.913 | 43.478 | 0.00 | 0.00 | 36.97 | 3.62 |
508 | 509 | 3.747010 | TGCTATCGCTTAAAAACGGAACA | 59.253 | 39.130 | 0.00 | 0.00 | 36.97 | 3.18 |
509 | 510 | 4.142988 | TGCTATCGCTTAAAAACGGAACAG | 60.143 | 41.667 | 0.00 | 0.00 | 36.97 | 3.16 |
510 | 511 | 4.142966 | GCTATCGCTTAAAAACGGAACAGT | 60.143 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
511 | 512 | 3.865224 | TCGCTTAAAAACGGAACAGTC | 57.135 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
512 | 513 | 2.219216 | TCGCTTAAAAACGGAACAGTCG | 59.781 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
513 | 514 | 2.660900 | CGCTTAAAAACGGAACAGTCGG | 60.661 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
514 | 515 | 2.545106 | GCTTAAAAACGGAACAGTCGGA | 59.455 | 45.455 | 0.00 | 0.00 | 0.00 | 4.55 |
515 | 516 | 3.002553 | GCTTAAAAACGGAACAGTCGGAA | 59.997 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
516 | 517 | 4.769215 | CTTAAAAACGGAACAGTCGGAAG | 58.231 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
517 | 518 | 2.320745 | AAAACGGAACAGTCGGAAGT | 57.679 | 45.000 | 0.00 | 0.00 | 0.00 | 3.01 |
518 | 519 | 2.320745 | AAACGGAACAGTCGGAAGTT | 57.679 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
519 | 520 | 3.457610 | AAACGGAACAGTCGGAAGTTA | 57.542 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
520 | 521 | 2.719426 | ACGGAACAGTCGGAAGTTAG | 57.281 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
521 | 522 | 1.959282 | ACGGAACAGTCGGAAGTTAGT | 59.041 | 47.619 | 0.00 | 0.24 | 0.00 | 2.24 |
522 | 523 | 2.030451 | ACGGAACAGTCGGAAGTTAGTC | 60.030 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
523 | 524 | 2.670509 | CGGAACAGTCGGAAGTTAGTCC | 60.671 | 54.545 | 0.00 | 0.00 | 0.00 | 3.85 |
524 | 525 | 2.298163 | GGAACAGTCGGAAGTTAGTCCA | 59.702 | 50.000 | 0.00 | 0.00 | 37.56 | 4.02 |
525 | 526 | 3.056035 | GGAACAGTCGGAAGTTAGTCCAT | 60.056 | 47.826 | 0.00 | 0.00 | 37.56 | 3.41 |
526 | 527 | 3.870633 | ACAGTCGGAAGTTAGTCCATC | 57.129 | 47.619 | 0.00 | 0.00 | 37.56 | 3.51 |
527 | 528 | 2.496470 | ACAGTCGGAAGTTAGTCCATCC | 59.504 | 50.000 | 0.00 | 0.00 | 37.56 | 3.51 |
528 | 529 | 2.108970 | AGTCGGAAGTTAGTCCATCCC | 58.891 | 52.381 | 0.00 | 0.00 | 37.56 | 3.85 |
529 | 530 | 1.829222 | GTCGGAAGTTAGTCCATCCCA | 59.171 | 52.381 | 0.00 | 0.00 | 37.56 | 4.37 |
530 | 531 | 2.434702 | GTCGGAAGTTAGTCCATCCCAT | 59.565 | 50.000 | 0.00 | 0.00 | 37.56 | 4.00 |
531 | 532 | 3.640029 | GTCGGAAGTTAGTCCATCCCATA | 59.360 | 47.826 | 0.00 | 0.00 | 37.56 | 2.74 |
532 | 533 | 4.283722 | GTCGGAAGTTAGTCCATCCCATAT | 59.716 | 45.833 | 0.00 | 0.00 | 37.56 | 1.78 |
533 | 534 | 5.479375 | GTCGGAAGTTAGTCCATCCCATATA | 59.521 | 44.000 | 0.00 | 0.00 | 37.56 | 0.86 |
534 | 535 | 5.479375 | TCGGAAGTTAGTCCATCCCATATAC | 59.521 | 44.000 | 0.00 | 0.00 | 37.56 | 1.47 |
535 | 536 | 5.245301 | CGGAAGTTAGTCCATCCCATATACA | 59.755 | 44.000 | 0.00 | 0.00 | 37.56 | 2.29 |
536 | 537 | 6.070767 | CGGAAGTTAGTCCATCCCATATACAT | 60.071 | 42.308 | 0.00 | 0.00 | 37.56 | 2.29 |
537 | 538 | 7.123697 | CGGAAGTTAGTCCATCCCATATACATA | 59.876 | 40.741 | 0.00 | 0.00 | 37.56 | 2.29 |
538 | 539 | 8.993424 | GGAAGTTAGTCCATCCCATATACATAT | 58.007 | 37.037 | 0.00 | 0.00 | 37.65 | 1.78 |
715 | 716 | 1.076332 | CTTTTGACTCGGCCCTTACG | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
737 | 738 | 2.044946 | GGACCAGGCGGCAGAAAT | 60.045 | 61.111 | 13.08 | 0.00 | 34.57 | 2.17 |
755 | 756 | 6.257193 | GCAGAAATGGCCAATTTTATTCAGAG | 59.743 | 38.462 | 10.96 | 4.07 | 38.64 | 3.35 |
756 | 757 | 7.549839 | CAGAAATGGCCAATTTTATTCAGAGA | 58.450 | 34.615 | 10.96 | 0.00 | 38.64 | 3.10 |
757 | 758 | 7.705325 | CAGAAATGGCCAATTTTATTCAGAGAG | 59.295 | 37.037 | 10.96 | 0.00 | 38.64 | 3.20 |
758 | 759 | 4.989279 | TGGCCAATTTTATTCAGAGAGC | 57.011 | 40.909 | 0.61 | 0.00 | 0.00 | 4.09 |
759 | 760 | 3.701040 | TGGCCAATTTTATTCAGAGAGCC | 59.299 | 43.478 | 0.61 | 0.00 | 37.19 | 4.70 |
760 | 761 | 3.243201 | GGCCAATTTTATTCAGAGAGCCG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
761 | 762 | 3.378427 | GCCAATTTTATTCAGAGAGCCGT | 59.622 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
762 | 763 | 4.142381 | GCCAATTTTATTCAGAGAGCCGTT | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
763 | 764 | 5.335127 | CCAATTTTATTCAGAGAGCCGTTG | 58.665 | 41.667 | 0.00 | 0.00 | 0.00 | 4.10 |
764 | 765 | 5.123820 | CCAATTTTATTCAGAGAGCCGTTGA | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
765 | 766 | 6.253746 | CAATTTTATTCAGAGAGCCGTTGAG | 58.746 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
990 | 998 | 0.727398 | CGTTGAGATTCCTTTCGGCC | 59.273 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1321 | 1329 | 4.914983 | AGAAGAGCATGAAGAATGGTTGA | 58.085 | 39.130 | 0.00 | 0.00 | 46.95 | 3.18 |
1381 | 1389 | 1.139654 | CGGAAGAAGAGATGGATGGCA | 59.860 | 52.381 | 0.00 | 0.00 | 0.00 | 4.92 |
1426 | 1437 | 4.480386 | GCTATTGAGCTTAGGATGTTGC | 57.520 | 45.455 | 0.00 | 0.00 | 45.98 | 4.17 |
1858 | 1871 | 4.684242 | CAGGGGTTTTCTTGCGTATTTTTC | 59.316 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2265 | 2284 | 2.197465 | GACATGGGTAGGGAAGGAAGT | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
2537 | 2564 | 2.610859 | GGCTTCTCACCCCCTCCA | 60.611 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
3 | 4 | 1.159285 | ACATGATCAGGTGCAACACG | 58.841 | 50.000 | 13.05 | 0.00 | 39.98 | 4.49 |
4 | 5 | 3.940852 | TCATACATGATCAGGTGCAACAC | 59.059 | 43.478 | 22.63 | 0.00 | 39.98 | 3.32 |
8 | 9 | 4.492494 | AACTCATACATGATCAGGTGCA | 57.508 | 40.909 | 22.63 | 4.25 | 36.02 | 4.57 |
9 | 10 | 4.637534 | ACAAACTCATACATGATCAGGTGC | 59.362 | 41.667 | 22.63 | 0.00 | 36.02 | 5.01 |
10 | 11 | 5.876460 | TCACAAACTCATACATGATCAGGTG | 59.124 | 40.000 | 22.63 | 9.01 | 36.02 | 4.00 |
11 | 12 | 6.053632 | TCACAAACTCATACATGATCAGGT | 57.946 | 37.500 | 18.14 | 18.14 | 36.02 | 4.00 |
12 | 13 | 5.526479 | CCTCACAAACTCATACATGATCAGG | 59.474 | 44.000 | 5.68 | 5.68 | 36.02 | 3.86 |
13 | 14 | 6.036844 | CACCTCACAAACTCATACATGATCAG | 59.963 | 42.308 | 0.00 | 0.00 | 36.02 | 2.90 |
14 | 15 | 5.876460 | CACCTCACAAACTCATACATGATCA | 59.124 | 40.000 | 0.00 | 0.00 | 36.02 | 2.92 |
17 | 18 | 5.227569 | ACACCTCACAAACTCATACATGA | 57.772 | 39.130 | 0.00 | 0.00 | 35.16 | 3.07 |
18 | 19 | 7.763985 | TGTATACACCTCACAAACTCATACATG | 59.236 | 37.037 | 0.08 | 0.00 | 0.00 | 3.21 |
19 | 20 | 7.847096 | TGTATACACCTCACAAACTCATACAT | 58.153 | 34.615 | 0.08 | 0.00 | 0.00 | 2.29 |
20 | 21 | 7.234661 | TGTATACACCTCACAAACTCATACA | 57.765 | 36.000 | 0.08 | 0.00 | 0.00 | 2.29 |
21 | 22 | 7.817962 | AGTTGTATACACCTCACAAACTCATAC | 59.182 | 37.037 | 4.68 | 0.00 | 34.20 | 2.39 |
22 | 23 | 7.903145 | AGTTGTATACACCTCACAAACTCATA | 58.097 | 34.615 | 4.68 | 0.00 | 34.20 | 2.15 |
24 | 25 | 6.169557 | AGTTGTATACACCTCACAAACTCA | 57.830 | 37.500 | 4.68 | 0.00 | 34.20 | 3.41 |
25 | 26 | 7.201530 | GCATAGTTGTATACACCTCACAAACTC | 60.202 | 40.741 | 6.16 | 0.00 | 34.20 | 3.01 |
26 | 27 | 6.594159 | GCATAGTTGTATACACCTCACAAACT | 59.406 | 38.462 | 6.16 | 6.97 | 34.20 | 2.66 |
27 | 28 | 6.370442 | TGCATAGTTGTATACACCTCACAAAC | 59.630 | 38.462 | 6.16 | 0.00 | 34.20 | 2.93 |
28 | 29 | 6.468543 | TGCATAGTTGTATACACCTCACAAA | 58.531 | 36.000 | 6.16 | 0.00 | 34.20 | 2.83 |
29 | 30 | 6.043854 | TGCATAGTTGTATACACCTCACAA | 57.956 | 37.500 | 6.16 | 0.00 | 0.00 | 3.33 |
30 | 31 | 5.669164 | TGCATAGTTGTATACACCTCACA | 57.331 | 39.130 | 6.16 | 1.53 | 0.00 | 3.58 |
31 | 32 | 7.553881 | AAATGCATAGTTGTATACACCTCAC | 57.446 | 36.000 | 6.16 | 1.77 | 0.00 | 3.51 |
32 | 33 | 8.574251 | AAAAATGCATAGTTGTATACACCTCA | 57.426 | 30.769 | 6.16 | 0.00 | 0.00 | 3.86 |
56 | 57 | 6.928492 | GTCATACTTCTGCCAAAATGGAAAAA | 59.072 | 34.615 | 0.00 | 0.00 | 40.96 | 1.94 |
57 | 58 | 6.454795 | GTCATACTTCTGCCAAAATGGAAAA | 58.545 | 36.000 | 0.00 | 0.00 | 40.96 | 2.29 |
58 | 59 | 5.335583 | CGTCATACTTCTGCCAAAATGGAAA | 60.336 | 40.000 | 0.00 | 0.00 | 40.96 | 3.13 |
59 | 60 | 4.155826 | CGTCATACTTCTGCCAAAATGGAA | 59.844 | 41.667 | 0.00 | 0.00 | 40.96 | 3.53 |
60 | 61 | 3.689161 | CGTCATACTTCTGCCAAAATGGA | 59.311 | 43.478 | 0.00 | 0.00 | 40.96 | 3.41 |
61 | 62 | 3.731867 | GCGTCATACTTCTGCCAAAATGG | 60.732 | 47.826 | 0.00 | 0.00 | 41.55 | 3.16 |
62 | 63 | 3.429085 | GCGTCATACTTCTGCCAAAATG | 58.571 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
63 | 64 | 2.095853 | CGCGTCATACTTCTGCCAAAAT | 59.904 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
64 | 65 | 1.463056 | CGCGTCATACTTCTGCCAAAA | 59.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
65 | 66 | 1.075542 | CGCGTCATACTTCTGCCAAA | 58.924 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
66 | 67 | 0.037697 | ACGCGTCATACTTCTGCCAA | 60.038 | 50.000 | 5.58 | 0.00 | 0.00 | 4.52 |
67 | 68 | 0.735978 | CACGCGTCATACTTCTGCCA | 60.736 | 55.000 | 9.86 | 0.00 | 0.00 | 4.92 |
68 | 69 | 1.999051 | CACGCGTCATACTTCTGCC | 59.001 | 57.895 | 9.86 | 0.00 | 0.00 | 4.85 |
69 | 70 | 1.345176 | GCACGCGTCATACTTCTGC | 59.655 | 57.895 | 9.86 | 2.00 | 0.00 | 4.26 |
70 | 71 | 1.625870 | CGCACGCGTCATACTTCTG | 59.374 | 57.895 | 9.86 | 0.00 | 34.35 | 3.02 |
71 | 72 | 4.072913 | CGCACGCGTCATACTTCT | 57.927 | 55.556 | 9.86 | 0.00 | 34.35 | 2.85 |
81 | 82 | 1.955529 | AAAGCAGATGTACGCACGCG | 61.956 | 55.000 | 10.36 | 10.36 | 46.03 | 6.01 |
82 | 83 | 0.247301 | GAAAGCAGATGTACGCACGC | 60.247 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
83 | 84 | 0.370273 | GGAAAGCAGATGTACGCACG | 59.630 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
84 | 85 | 1.438651 | TGGAAAGCAGATGTACGCAC | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
85 | 86 | 2.177394 | TTGGAAAGCAGATGTACGCA | 57.823 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
86 | 87 | 3.764885 | ATTTGGAAAGCAGATGTACGC | 57.235 | 42.857 | 0.00 | 0.00 | 0.00 | 4.42 |
87 | 88 | 8.773645 | TCATATAATTTGGAAAGCAGATGTACG | 58.226 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
93 | 94 | 9.208022 | CGAGTATCATATAATTTGGAAAGCAGA | 57.792 | 33.333 | 0.00 | 0.00 | 33.17 | 4.26 |
94 | 95 | 8.993121 | ACGAGTATCATATAATTTGGAAAGCAG | 58.007 | 33.333 | 0.00 | 0.00 | 33.17 | 4.24 |
95 | 96 | 8.902540 | ACGAGTATCATATAATTTGGAAAGCA | 57.097 | 30.769 | 0.00 | 0.00 | 33.17 | 3.91 |
104 | 105 | 9.503399 | GGGGAAAGAAACGAGTATCATATAATT | 57.497 | 33.333 | 0.00 | 0.00 | 33.17 | 1.40 |
105 | 106 | 7.817962 | CGGGGAAAGAAACGAGTATCATATAAT | 59.182 | 37.037 | 0.00 | 0.00 | 33.17 | 1.28 |
106 | 107 | 7.014518 | TCGGGGAAAGAAACGAGTATCATATAA | 59.985 | 37.037 | 0.00 | 0.00 | 33.17 | 0.98 |
107 | 108 | 6.491062 | TCGGGGAAAGAAACGAGTATCATATA | 59.509 | 38.462 | 0.00 | 0.00 | 33.17 | 0.86 |
108 | 109 | 5.303589 | TCGGGGAAAGAAACGAGTATCATAT | 59.696 | 40.000 | 0.00 | 0.00 | 33.17 | 1.78 |
109 | 110 | 4.646040 | TCGGGGAAAGAAACGAGTATCATA | 59.354 | 41.667 | 0.00 | 0.00 | 33.17 | 2.15 |
110 | 111 | 3.449737 | TCGGGGAAAGAAACGAGTATCAT | 59.550 | 43.478 | 0.00 | 0.00 | 33.17 | 2.45 |
111 | 112 | 2.827322 | TCGGGGAAAGAAACGAGTATCA | 59.173 | 45.455 | 0.00 | 0.00 | 33.17 | 2.15 |
112 | 113 | 3.515330 | TCGGGGAAAGAAACGAGTATC | 57.485 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
113 | 114 | 3.967332 | TTCGGGGAAAGAAACGAGTAT | 57.033 | 42.857 | 0.00 | 0.00 | 36.65 | 2.12 |
114 | 115 | 3.967332 | ATTCGGGGAAAGAAACGAGTA | 57.033 | 42.857 | 0.00 | 0.00 | 36.65 | 2.59 |
115 | 116 | 2.853235 | ATTCGGGGAAAGAAACGAGT | 57.147 | 45.000 | 0.00 | 0.00 | 36.65 | 4.18 |
116 | 117 | 3.858247 | ACTATTCGGGGAAAGAAACGAG | 58.142 | 45.455 | 0.00 | 0.00 | 36.65 | 4.18 |
117 | 118 | 3.674138 | CGACTATTCGGGGAAAGAAACGA | 60.674 | 47.826 | 0.00 | 0.00 | 41.89 | 3.85 |
118 | 119 | 2.601763 | CGACTATTCGGGGAAAGAAACG | 59.398 | 50.000 | 0.00 | 0.00 | 41.89 | 3.60 |
130 | 131 | 7.361127 | ACATACTACAGATTTCCGACTATTCG | 58.639 | 38.462 | 0.00 | 0.00 | 45.44 | 3.34 |
135 | 136 | 9.352191 | ACTATAACATACTACAGATTTCCGACT | 57.648 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
136 | 137 | 9.962783 | AACTATAACATACTACAGATTTCCGAC | 57.037 | 33.333 | 0.00 | 0.00 | 0.00 | 4.79 |
149 | 150 | 8.429641 | CCACTCCCATACAAACTATAACATACT | 58.570 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
150 | 151 | 8.208903 | ACCACTCCCATACAAACTATAACATAC | 58.791 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
151 | 152 | 8.326765 | ACCACTCCCATACAAACTATAACATA | 57.673 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
152 | 153 | 7.208064 | ACCACTCCCATACAAACTATAACAT | 57.792 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
153 | 154 | 6.630203 | ACCACTCCCATACAAACTATAACA | 57.370 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
154 | 155 | 8.886719 | GTTTACCACTCCCATACAAACTATAAC | 58.113 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
155 | 156 | 8.828751 | AGTTTACCACTCCCATACAAACTATAA | 58.171 | 33.333 | 0.00 | 0.00 | 34.07 | 0.98 |
156 | 157 | 8.383374 | AGTTTACCACTCCCATACAAACTATA | 57.617 | 34.615 | 0.00 | 0.00 | 34.07 | 1.31 |
157 | 158 | 7.266905 | AGTTTACCACTCCCATACAAACTAT | 57.733 | 36.000 | 0.00 | 0.00 | 34.07 | 2.12 |
158 | 159 | 6.691255 | AGTTTACCACTCCCATACAAACTA | 57.309 | 37.500 | 0.00 | 0.00 | 34.07 | 2.24 |
159 | 160 | 5.578157 | AGTTTACCACTCCCATACAAACT | 57.422 | 39.130 | 0.00 | 0.00 | 31.70 | 2.66 |
160 | 161 | 5.533528 | ACAAGTTTACCACTCCCATACAAAC | 59.466 | 40.000 | 0.00 | 0.00 | 32.94 | 2.93 |
161 | 162 | 5.697067 | ACAAGTTTACCACTCCCATACAAA | 58.303 | 37.500 | 0.00 | 0.00 | 32.94 | 2.83 |
162 | 163 | 5.313280 | ACAAGTTTACCACTCCCATACAA | 57.687 | 39.130 | 0.00 | 0.00 | 32.94 | 2.41 |
163 | 164 | 4.986054 | ACAAGTTTACCACTCCCATACA | 57.014 | 40.909 | 0.00 | 0.00 | 32.94 | 2.29 |
164 | 165 | 5.067954 | ACAACAAGTTTACCACTCCCATAC | 58.932 | 41.667 | 0.00 | 0.00 | 32.94 | 2.39 |
165 | 166 | 5.313280 | ACAACAAGTTTACCACTCCCATA | 57.687 | 39.130 | 0.00 | 0.00 | 32.94 | 2.74 |
166 | 167 | 4.178956 | ACAACAAGTTTACCACTCCCAT | 57.821 | 40.909 | 0.00 | 0.00 | 32.94 | 4.00 |
167 | 168 | 3.655615 | ACAACAAGTTTACCACTCCCA | 57.344 | 42.857 | 0.00 | 0.00 | 32.94 | 4.37 |
168 | 169 | 5.008316 | CAGTTACAACAAGTTTACCACTCCC | 59.992 | 44.000 | 0.00 | 0.00 | 32.94 | 4.30 |
169 | 170 | 5.505159 | GCAGTTACAACAAGTTTACCACTCC | 60.505 | 44.000 | 0.00 | 0.00 | 32.94 | 3.85 |
170 | 171 | 5.296035 | AGCAGTTACAACAAGTTTACCACTC | 59.704 | 40.000 | 0.00 | 0.00 | 32.94 | 3.51 |
171 | 172 | 5.190677 | AGCAGTTACAACAAGTTTACCACT | 58.809 | 37.500 | 0.00 | 0.00 | 37.30 | 4.00 |
172 | 173 | 5.494632 | AGCAGTTACAACAAGTTTACCAC | 57.505 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
173 | 174 | 7.118680 | GCTATAGCAGTTACAACAAGTTTACCA | 59.881 | 37.037 | 20.01 | 0.00 | 41.59 | 3.25 |
174 | 175 | 7.413767 | GGCTATAGCAGTTACAACAAGTTTACC | 60.414 | 40.741 | 25.53 | 0.00 | 44.36 | 2.85 |
175 | 176 | 7.333672 | AGGCTATAGCAGTTACAACAAGTTTAC | 59.666 | 37.037 | 25.53 | 2.28 | 44.36 | 2.01 |
176 | 177 | 7.333423 | CAGGCTATAGCAGTTACAACAAGTTTA | 59.667 | 37.037 | 25.53 | 0.00 | 44.36 | 2.01 |
177 | 178 | 6.149474 | CAGGCTATAGCAGTTACAACAAGTTT | 59.851 | 38.462 | 25.53 | 0.00 | 44.36 | 2.66 |
178 | 179 | 5.643777 | CAGGCTATAGCAGTTACAACAAGTT | 59.356 | 40.000 | 25.53 | 0.00 | 44.36 | 2.66 |
179 | 180 | 5.178797 | CAGGCTATAGCAGTTACAACAAGT | 58.821 | 41.667 | 25.53 | 0.00 | 44.36 | 3.16 |
180 | 181 | 5.178797 | ACAGGCTATAGCAGTTACAACAAG | 58.821 | 41.667 | 25.53 | 5.85 | 44.36 | 3.16 |
181 | 182 | 5.160607 | ACAGGCTATAGCAGTTACAACAA | 57.839 | 39.130 | 25.53 | 0.00 | 44.36 | 2.83 |
182 | 183 | 4.819105 | ACAGGCTATAGCAGTTACAACA | 57.181 | 40.909 | 25.53 | 0.00 | 44.36 | 3.33 |
183 | 184 | 7.169982 | CAGATTACAGGCTATAGCAGTTACAAC | 59.830 | 40.741 | 25.53 | 10.40 | 44.36 | 3.32 |
184 | 185 | 7.147724 | ACAGATTACAGGCTATAGCAGTTACAA | 60.148 | 37.037 | 25.53 | 14.21 | 44.36 | 2.41 |
185 | 186 | 6.323996 | ACAGATTACAGGCTATAGCAGTTACA | 59.676 | 38.462 | 25.53 | 11.24 | 44.36 | 2.41 |
186 | 187 | 6.750148 | ACAGATTACAGGCTATAGCAGTTAC | 58.250 | 40.000 | 25.53 | 15.68 | 44.36 | 2.50 |
187 | 188 | 6.978674 | ACAGATTACAGGCTATAGCAGTTA | 57.021 | 37.500 | 25.53 | 16.69 | 44.36 | 2.24 |
188 | 189 | 5.878406 | ACAGATTACAGGCTATAGCAGTT | 57.122 | 39.130 | 25.53 | 11.15 | 44.36 | 3.16 |
189 | 190 | 5.878406 | AACAGATTACAGGCTATAGCAGT | 57.122 | 39.130 | 25.53 | 23.00 | 44.36 | 4.40 |
190 | 191 | 5.698545 | GGAAACAGATTACAGGCTATAGCAG | 59.301 | 44.000 | 25.53 | 18.84 | 44.36 | 4.24 |
191 | 192 | 5.454755 | GGGAAACAGATTACAGGCTATAGCA | 60.455 | 44.000 | 25.53 | 5.60 | 44.36 | 3.49 |
192 | 193 | 4.998033 | GGGAAACAGATTACAGGCTATAGC | 59.002 | 45.833 | 16.78 | 16.78 | 41.14 | 2.97 |
193 | 194 | 5.221461 | ACGGGAAACAGATTACAGGCTATAG | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 1.31 |
194 | 195 | 4.652421 | ACGGGAAACAGATTACAGGCTATA | 59.348 | 41.667 | 0.00 | 0.00 | 0.00 | 1.31 |
195 | 196 | 3.454812 | ACGGGAAACAGATTACAGGCTAT | 59.545 | 43.478 | 0.00 | 0.00 | 0.00 | 2.97 |
196 | 197 | 2.835764 | ACGGGAAACAGATTACAGGCTA | 59.164 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
197 | 198 | 1.628846 | ACGGGAAACAGATTACAGGCT | 59.371 | 47.619 | 0.00 | 0.00 | 0.00 | 4.58 |
198 | 199 | 1.737793 | CACGGGAAACAGATTACAGGC | 59.262 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
199 | 200 | 3.053831 | ACACGGGAAACAGATTACAGG | 57.946 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
200 | 201 | 5.432885 | AAAACACGGGAAACAGATTACAG | 57.567 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
201 | 202 | 5.838531 | AAAAACACGGGAAACAGATTACA | 57.161 | 34.783 | 0.00 | 0.00 | 0.00 | 2.41 |
202 | 203 | 7.073883 | GTCTAAAAACACGGGAAACAGATTAC | 58.926 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
203 | 204 | 6.766944 | TGTCTAAAAACACGGGAAACAGATTA | 59.233 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
204 | 205 | 5.591067 | TGTCTAAAAACACGGGAAACAGATT | 59.409 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
205 | 206 | 5.127491 | TGTCTAAAAACACGGGAAACAGAT | 58.873 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
206 | 207 | 4.515361 | TGTCTAAAAACACGGGAAACAGA | 58.485 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
207 | 208 | 4.886247 | TGTCTAAAAACACGGGAAACAG | 57.114 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
208 | 209 | 5.838531 | ATTGTCTAAAAACACGGGAAACA | 57.161 | 34.783 | 0.00 | 0.00 | 0.00 | 2.83 |
209 | 210 | 7.377662 | CAGTAATTGTCTAAAAACACGGGAAAC | 59.622 | 37.037 | 0.00 | 0.00 | 0.00 | 2.78 |
210 | 211 | 7.067251 | ACAGTAATTGTCTAAAAACACGGGAAA | 59.933 | 33.333 | 0.00 | 0.00 | 33.87 | 3.13 |
211 | 212 | 6.543100 | ACAGTAATTGTCTAAAAACACGGGAA | 59.457 | 34.615 | 0.00 | 0.00 | 33.87 | 3.97 |
212 | 213 | 6.056884 | ACAGTAATTGTCTAAAAACACGGGA | 58.943 | 36.000 | 0.00 | 0.00 | 33.87 | 5.14 |
213 | 214 | 6.308371 | ACAGTAATTGTCTAAAAACACGGG | 57.692 | 37.500 | 0.00 | 0.00 | 33.87 | 5.28 |
214 | 215 | 8.623310 | AAAACAGTAATTGTCTAAAAACACGG | 57.377 | 30.769 | 0.00 | 0.00 | 39.73 | 4.94 |
279 | 280 | 9.442047 | GCAGGTATTTGCAAGATTATCTACTAT | 57.558 | 33.333 | 0.00 | 0.00 | 43.53 | 2.12 |
280 | 281 | 8.833231 | GCAGGTATTTGCAAGATTATCTACTA | 57.167 | 34.615 | 0.00 | 0.00 | 43.53 | 1.82 |
281 | 282 | 7.736447 | GCAGGTATTTGCAAGATTATCTACT | 57.264 | 36.000 | 0.00 | 0.00 | 43.53 | 2.57 |
304 | 305 | 8.635328 | TGGGAATCAAATATGCATATCATATGC | 58.365 | 33.333 | 21.07 | 21.07 | 45.20 | 3.14 |
307 | 308 | 9.399797 | GTCTGGGAATCAAATATGCATATCATA | 57.600 | 33.333 | 19.35 | 8.24 | 41.52 | 2.15 |
308 | 309 | 8.114102 | AGTCTGGGAATCAAATATGCATATCAT | 58.886 | 33.333 | 19.35 | 9.13 | 39.17 | 2.45 |
309 | 310 | 7.464273 | AGTCTGGGAATCAAATATGCATATCA | 58.536 | 34.615 | 19.35 | 9.47 | 0.00 | 2.15 |
310 | 311 | 7.934855 | AGTCTGGGAATCAAATATGCATATC | 57.065 | 36.000 | 19.35 | 6.91 | 0.00 | 1.63 |
311 | 312 | 7.727186 | ACAAGTCTGGGAATCAAATATGCATAT | 59.273 | 33.333 | 13.63 | 13.63 | 0.00 | 1.78 |
312 | 313 | 7.062322 | ACAAGTCTGGGAATCAAATATGCATA | 58.938 | 34.615 | 9.27 | 9.27 | 0.00 | 3.14 |
313 | 314 | 5.895534 | ACAAGTCTGGGAATCAAATATGCAT | 59.104 | 36.000 | 3.79 | 3.79 | 0.00 | 3.96 |
314 | 315 | 5.263599 | ACAAGTCTGGGAATCAAATATGCA | 58.736 | 37.500 | 0.00 | 0.00 | 0.00 | 3.96 |
315 | 316 | 5.841957 | ACAAGTCTGGGAATCAAATATGC | 57.158 | 39.130 | 0.00 | 0.00 | 0.00 | 3.14 |
321 | 322 | 9.362151 | ACTTTATTTTACAAGTCTGGGAATCAA | 57.638 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
322 | 323 | 8.934023 | ACTTTATTTTACAAGTCTGGGAATCA | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
367 | 368 | 8.241367 | GGATGAACGGAGTGTAATTGTAAATTT | 58.759 | 33.333 | 0.00 | 0.00 | 45.00 | 1.82 |
368 | 369 | 7.392113 | TGGATGAACGGAGTGTAATTGTAAATT | 59.608 | 33.333 | 0.00 | 0.00 | 45.00 | 1.82 |
369 | 370 | 6.882140 | TGGATGAACGGAGTGTAATTGTAAAT | 59.118 | 34.615 | 0.00 | 0.00 | 45.00 | 1.40 |
370 | 371 | 6.231951 | TGGATGAACGGAGTGTAATTGTAAA | 58.768 | 36.000 | 0.00 | 0.00 | 45.00 | 2.01 |
371 | 372 | 5.795972 | TGGATGAACGGAGTGTAATTGTAA | 58.204 | 37.500 | 0.00 | 0.00 | 45.00 | 2.41 |
372 | 373 | 5.408880 | TGGATGAACGGAGTGTAATTGTA | 57.591 | 39.130 | 0.00 | 0.00 | 45.00 | 2.41 |
373 | 374 | 4.280436 | TGGATGAACGGAGTGTAATTGT | 57.720 | 40.909 | 0.00 | 0.00 | 45.00 | 2.71 |
374 | 375 | 5.181245 | AGTTTGGATGAACGGAGTGTAATTG | 59.819 | 40.000 | 0.00 | 0.00 | 45.00 | 2.32 |
375 | 376 | 5.313712 | AGTTTGGATGAACGGAGTGTAATT | 58.686 | 37.500 | 0.00 | 0.00 | 45.00 | 1.40 |
376 | 377 | 4.906618 | AGTTTGGATGAACGGAGTGTAAT | 58.093 | 39.130 | 0.00 | 0.00 | 45.00 | 1.89 |
377 | 378 | 4.312443 | GAGTTTGGATGAACGGAGTGTAA | 58.688 | 43.478 | 0.00 | 0.00 | 45.00 | 2.41 |
378 | 379 | 3.613193 | CGAGTTTGGATGAACGGAGTGTA | 60.613 | 47.826 | 0.00 | 0.00 | 45.00 | 2.90 |
379 | 380 | 2.767505 | GAGTTTGGATGAACGGAGTGT | 58.232 | 47.619 | 0.00 | 0.00 | 45.00 | 3.55 |
380 | 381 | 1.726791 | CGAGTTTGGATGAACGGAGTG | 59.273 | 52.381 | 0.00 | 0.00 | 45.00 | 3.51 |
382 | 383 | 2.363788 | TCGAGTTTGGATGAACGGAG | 57.636 | 50.000 | 0.00 | 0.00 | 34.74 | 4.63 |
383 | 384 | 2.823924 | TTCGAGTTTGGATGAACGGA | 57.176 | 45.000 | 0.00 | 0.00 | 34.74 | 4.69 |
384 | 385 | 2.029244 | CGATTCGAGTTTGGATGAACGG | 59.971 | 50.000 | 0.00 | 0.00 | 34.74 | 4.44 |
385 | 386 | 2.029244 | CCGATTCGAGTTTGGATGAACG | 59.971 | 50.000 | 7.83 | 0.00 | 34.74 | 3.95 |
386 | 387 | 3.259064 | TCCGATTCGAGTTTGGATGAAC | 58.741 | 45.455 | 7.83 | 0.00 | 0.00 | 3.18 |
387 | 388 | 3.603158 | TCCGATTCGAGTTTGGATGAA | 57.397 | 42.857 | 7.83 | 0.00 | 0.00 | 2.57 |
388 | 389 | 3.603158 | TTCCGATTCGAGTTTGGATGA | 57.397 | 42.857 | 7.83 | 0.00 | 0.00 | 2.92 |
389 | 390 | 4.882671 | ATTTCCGATTCGAGTTTGGATG | 57.117 | 40.909 | 7.83 | 0.00 | 0.00 | 3.51 |
390 | 391 | 5.897377 | AAATTTCCGATTCGAGTTTGGAT | 57.103 | 34.783 | 7.83 | 0.00 | 0.00 | 3.41 |
391 | 392 | 5.457140 | CAAAATTTCCGATTCGAGTTTGGA | 58.543 | 37.500 | 7.83 | 2.97 | 0.00 | 3.53 |
392 | 393 | 4.089923 | GCAAAATTTCCGATTCGAGTTTGG | 59.910 | 41.667 | 15.92 | 7.75 | 0.00 | 3.28 |
393 | 394 | 4.917415 | AGCAAAATTTCCGATTCGAGTTTG | 59.083 | 37.500 | 7.83 | 10.58 | 0.00 | 2.93 |
394 | 395 | 5.121221 | AGCAAAATTTCCGATTCGAGTTT | 57.879 | 34.783 | 7.83 | 0.00 | 0.00 | 2.66 |
395 | 396 | 4.379499 | GGAGCAAAATTTCCGATTCGAGTT | 60.379 | 41.667 | 7.83 | 0.00 | 0.00 | 3.01 |
396 | 397 | 3.127030 | GGAGCAAAATTTCCGATTCGAGT | 59.873 | 43.478 | 7.83 | 0.00 | 0.00 | 4.18 |
397 | 398 | 3.487544 | GGGAGCAAAATTTCCGATTCGAG | 60.488 | 47.826 | 7.83 | 0.00 | 34.17 | 4.04 |
398 | 399 | 2.422127 | GGGAGCAAAATTTCCGATTCGA | 59.578 | 45.455 | 7.83 | 0.00 | 34.17 | 3.71 |
399 | 400 | 2.479560 | GGGGAGCAAAATTTCCGATTCG | 60.480 | 50.000 | 0.00 | 0.00 | 34.17 | 3.34 |
400 | 401 | 2.760650 | AGGGGAGCAAAATTTCCGATTC | 59.239 | 45.455 | 0.00 | 0.00 | 34.17 | 2.52 |
401 | 402 | 2.820178 | AGGGGAGCAAAATTTCCGATT | 58.180 | 42.857 | 0.00 | 0.00 | 34.17 | 3.34 |
402 | 403 | 2.497273 | CAAGGGGAGCAAAATTTCCGAT | 59.503 | 45.455 | 0.00 | 0.00 | 34.17 | 4.18 |
403 | 404 | 1.892474 | CAAGGGGAGCAAAATTTCCGA | 59.108 | 47.619 | 0.00 | 0.00 | 34.17 | 4.55 |
404 | 405 | 1.892474 | TCAAGGGGAGCAAAATTTCCG | 59.108 | 47.619 | 0.00 | 0.00 | 34.17 | 4.30 |
405 | 406 | 4.558226 | ATTCAAGGGGAGCAAAATTTCC | 57.442 | 40.909 | 0.00 | 0.00 | 0.00 | 3.13 |
406 | 407 | 4.154737 | GCAATTCAAGGGGAGCAAAATTTC | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
407 | 408 | 4.074259 | GCAATTCAAGGGGAGCAAAATTT | 58.926 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
408 | 409 | 3.072768 | TGCAATTCAAGGGGAGCAAAATT | 59.927 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
409 | 410 | 2.638855 | TGCAATTCAAGGGGAGCAAAAT | 59.361 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
410 | 411 | 2.045524 | TGCAATTCAAGGGGAGCAAAA | 58.954 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
411 | 412 | 1.714541 | TGCAATTCAAGGGGAGCAAA | 58.285 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 |
412 | 413 | 1.619827 | CTTGCAATTCAAGGGGAGCAA | 59.380 | 47.619 | 0.00 | 0.00 | 46.50 | 3.91 |
413 | 414 | 1.259609 | CTTGCAATTCAAGGGGAGCA | 58.740 | 50.000 | 0.00 | 0.00 | 46.50 | 4.26 |
421 | 422 | 5.791666 | TCATATTTGGCACTTGCAATTCAA | 58.208 | 33.333 | 0.00 | 0.00 | 44.36 | 2.69 |
422 | 423 | 5.402997 | TCATATTTGGCACTTGCAATTCA | 57.597 | 34.783 | 0.00 | 0.00 | 44.36 | 2.57 |
423 | 424 | 5.638657 | TGTTCATATTTGGCACTTGCAATTC | 59.361 | 36.000 | 0.00 | 0.00 | 44.36 | 2.17 |
424 | 425 | 5.549347 | TGTTCATATTTGGCACTTGCAATT | 58.451 | 33.333 | 0.00 | 0.00 | 44.36 | 2.32 |
425 | 426 | 5.047164 | TCTGTTCATATTTGGCACTTGCAAT | 60.047 | 36.000 | 0.00 | 0.00 | 44.36 | 3.56 |
426 | 427 | 4.280425 | TCTGTTCATATTTGGCACTTGCAA | 59.720 | 37.500 | 0.00 | 0.00 | 44.36 | 4.08 |
427 | 428 | 3.825585 | TCTGTTCATATTTGGCACTTGCA | 59.174 | 39.130 | 3.15 | 0.00 | 44.36 | 4.08 |
428 | 429 | 4.439305 | TCTGTTCATATTTGGCACTTGC | 57.561 | 40.909 | 0.00 | 0.00 | 41.14 | 4.01 |
429 | 430 | 7.816031 | AGATTTTCTGTTCATATTTGGCACTTG | 59.184 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
430 | 431 | 7.899973 | AGATTTTCTGTTCATATTTGGCACTT | 58.100 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
431 | 432 | 7.472334 | AGATTTTCTGTTCATATTTGGCACT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 4.40 |
432 | 433 | 8.538409 | AAAGATTTTCTGTTCATATTTGGCAC | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 5.01 |
433 | 434 | 9.206870 | GAAAAGATTTTCTGTTCATATTTGGCA | 57.793 | 29.630 | 10.15 | 0.00 | 39.85 | 4.92 |
434 | 435 | 9.206870 | TGAAAAGATTTTCTGTTCATATTTGGC | 57.793 | 29.630 | 16.62 | 0.00 | 43.70 | 4.52 |
463 | 464 | 9.509956 | AGCACATAGGTGTAGTTTTAATTTGTA | 57.490 | 29.630 | 9.57 | 0.00 | 46.95 | 2.41 |
464 | 465 | 8.404107 | AGCACATAGGTGTAGTTTTAATTTGT | 57.596 | 30.769 | 9.57 | 0.00 | 46.95 | 2.83 |
467 | 468 | 9.042008 | CGATAGCACATAGGTGTAGTTTTAATT | 57.958 | 33.333 | 9.57 | 0.00 | 46.95 | 1.40 |
468 | 469 | 8.589335 | CGATAGCACATAGGTGTAGTTTTAAT | 57.411 | 34.615 | 9.57 | 0.00 | 46.95 | 1.40 |
469 | 470 | 7.997107 | CGATAGCACATAGGTGTAGTTTTAA | 57.003 | 36.000 | 9.57 | 0.00 | 46.95 | 1.52 |
488 | 489 | 5.526010 | ACTGTTCCGTTTTTAAGCGATAG | 57.474 | 39.130 | 0.14 | 0.00 | 34.38 | 2.08 |
489 | 490 | 4.090354 | CGACTGTTCCGTTTTTAAGCGATA | 59.910 | 41.667 | 0.14 | 0.00 | 34.38 | 2.92 |
490 | 491 | 3.120786 | CGACTGTTCCGTTTTTAAGCGAT | 60.121 | 43.478 | 0.14 | 0.00 | 34.38 | 4.58 |
491 | 492 | 2.219216 | CGACTGTTCCGTTTTTAAGCGA | 59.781 | 45.455 | 0.14 | 0.00 | 34.38 | 4.93 |
492 | 493 | 2.556806 | CGACTGTTCCGTTTTTAAGCG | 58.443 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
493 | 494 | 2.545106 | TCCGACTGTTCCGTTTTTAAGC | 59.455 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
494 | 495 | 4.271776 | ACTTCCGACTGTTCCGTTTTTAAG | 59.728 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
495 | 496 | 4.190772 | ACTTCCGACTGTTCCGTTTTTAA | 58.809 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
496 | 497 | 3.795877 | ACTTCCGACTGTTCCGTTTTTA | 58.204 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
497 | 498 | 2.635714 | ACTTCCGACTGTTCCGTTTTT | 58.364 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
498 | 499 | 2.320745 | ACTTCCGACTGTTCCGTTTT | 57.679 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
499 | 500 | 2.320745 | AACTTCCGACTGTTCCGTTT | 57.679 | 45.000 | 0.00 | 0.00 | 0.00 | 3.60 |
500 | 501 | 2.363359 | ACTAACTTCCGACTGTTCCGTT | 59.637 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
501 | 502 | 1.959282 | ACTAACTTCCGACTGTTCCGT | 59.041 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
502 | 503 | 2.593257 | GACTAACTTCCGACTGTTCCG | 58.407 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
503 | 504 | 2.298163 | TGGACTAACTTCCGACTGTTCC | 59.702 | 50.000 | 0.00 | 0.00 | 38.69 | 3.62 |
504 | 505 | 3.655276 | TGGACTAACTTCCGACTGTTC | 57.345 | 47.619 | 0.00 | 0.00 | 38.69 | 3.18 |
505 | 506 | 3.056035 | GGATGGACTAACTTCCGACTGTT | 60.056 | 47.826 | 0.00 | 0.00 | 38.69 | 3.16 |
506 | 507 | 2.496470 | GGATGGACTAACTTCCGACTGT | 59.504 | 50.000 | 0.00 | 0.00 | 38.69 | 3.55 |
507 | 508 | 2.159085 | GGGATGGACTAACTTCCGACTG | 60.159 | 54.545 | 0.00 | 0.00 | 38.69 | 3.51 |
508 | 509 | 2.108970 | GGGATGGACTAACTTCCGACT | 58.891 | 52.381 | 0.00 | 0.00 | 38.69 | 4.18 |
509 | 510 | 1.829222 | TGGGATGGACTAACTTCCGAC | 59.171 | 52.381 | 0.00 | 0.00 | 38.69 | 4.79 |
510 | 511 | 2.241281 | TGGGATGGACTAACTTCCGA | 57.759 | 50.000 | 0.00 | 0.00 | 38.69 | 4.55 |
511 | 512 | 4.891992 | ATATGGGATGGACTAACTTCCG | 57.108 | 45.455 | 0.00 | 0.00 | 38.69 | 4.30 |
512 | 513 | 6.681729 | TGTATATGGGATGGACTAACTTCC | 57.318 | 41.667 | 0.00 | 0.00 | 36.03 | 3.46 |
553 | 554 | 9.394767 | GCAAAAGGATAATTAACCCATCAATTT | 57.605 | 29.630 | 8.09 | 0.00 | 0.00 | 1.82 |
554 | 555 | 7.992608 | GGCAAAAGGATAATTAACCCATCAATT | 59.007 | 33.333 | 8.09 | 0.00 | 0.00 | 2.32 |
555 | 556 | 7.420097 | GGGCAAAAGGATAATTAACCCATCAAT | 60.420 | 37.037 | 8.09 | 0.00 | 34.82 | 2.57 |
558 | 559 | 5.602561 | AGGGCAAAAGGATAATTAACCCATC | 59.397 | 40.000 | 8.09 | 0.00 | 37.28 | 3.51 |
737 | 738 | 3.701040 | GGCTCTCTGAATAAAATTGGCCA | 59.299 | 43.478 | 0.00 | 0.00 | 36.31 | 5.36 |
755 | 756 | 4.090057 | GCAACGGCTCAACGGCTC | 62.090 | 66.667 | 0.00 | 0.00 | 38.39 | 4.70 |
756 | 757 | 4.927782 | TGCAACGGCTCAACGGCT | 62.928 | 61.111 | 0.00 | 0.00 | 41.91 | 5.52 |
757 | 758 | 4.683334 | GTGCAACGGCTCAACGGC | 62.683 | 66.667 | 0.00 | 0.00 | 41.91 | 5.68 |
843 | 844 | 4.664677 | GTCACCACCGCTGTCGCT | 62.665 | 66.667 | 0.00 | 0.00 | 0.00 | 4.93 |
942 | 950 | 1.142748 | CTCCACTGCTAGCTTCCCG | 59.857 | 63.158 | 17.23 | 1.90 | 0.00 | 5.14 |
990 | 998 | 1.144936 | GGAAGACATGGAGCTCGGG | 59.855 | 63.158 | 7.83 | 1.83 | 0.00 | 5.14 |
1381 | 1389 | 0.104855 | TCTCTGTCAGTGCGTGCTTT | 59.895 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1426 | 1437 | 4.899502 | TCAAGCTTCCTAACCTTCTTCTG | 58.100 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2306 | 2333 | 0.865111 | TGCAAACATTCACGGTCTCG | 59.135 | 50.000 | 0.00 | 0.00 | 43.02 | 4.04 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.