Multiple sequence alignment - TraesCS2B01G563100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G563100 chr2B 100.000 2167 0 0 1 2167 755031706 755033872 0.000000e+00 4002
1 TraesCS2B01G563100 chr2B 91.242 1747 98 20 422 2167 755148210 755146518 0.000000e+00 2327
2 TraesCS2B01G563100 chr2B 93.541 418 23 1 1 418 406073329 406073742 1.010000e-173 619
3 TraesCS2B01G563100 chr2B 100.000 116 0 0 2447 2562 755034152 755034267 5.550000e-52 215
4 TraesCS2B01G563100 chr2B 79.104 268 53 3 604 869 708710784 708710518 5.630000e-42 182
5 TraesCS2B01G563100 chr2D 87.433 1679 155 17 425 2087 618336772 618338410 0.000000e+00 1881
6 TraesCS2B01G563100 chr2D 78.648 281 56 4 591 869 586958023 586957745 1.570000e-42 183
7 TraesCS2B01G563100 chr2A 88.342 1158 113 11 591 1740 749388501 749389644 0.000000e+00 1371
8 TraesCS2B01G563100 chr2A 84.633 449 49 12 1729 2167 749428178 749428616 1.820000e-116 429
9 TraesCS2B01G563100 chr2A 77.818 275 58 3 597 869 721725890 721725617 1.580000e-37 167
10 TraesCS2B01G563100 chr5B 94.737 418 22 0 1 418 705792878 705793295 0.000000e+00 651
11 TraesCS2B01G563100 chr5B 93.780 418 22 1 1 418 276345017 276345430 2.160000e-175 625
12 TraesCS2B01G563100 chr5B 93.541 418 26 1 1 418 689814398 689814814 2.800000e-174 621
13 TraesCS2B01G563100 chr5B 93.541 418 24 1 1 418 705769784 705770198 1.010000e-173 619
14 TraesCS2B01G563100 chr7B 94.258 418 19 1 1 418 159782597 159783009 3.600000e-178 634
15 TraesCS2B01G563100 chr7B 93.541 418 23 1 1 418 159761292 159761705 1.010000e-173 619
16 TraesCS2B01G563100 chr6B 93.750 416 22 1 3 418 298545732 298546143 2.800000e-174 621
17 TraesCS2B01G563100 chr6B 93.541 418 22 1 1 418 652826960 652827372 3.620000e-173 617


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G563100 chr2B 755031706 755034267 2561 False 2108.5 4002 100.000 1 2562 2 chr2B.!!$F2 2561
1 TraesCS2B01G563100 chr2B 755146518 755148210 1692 True 2327.0 2327 91.242 422 2167 1 chr2B.!!$R2 1745
2 TraesCS2B01G563100 chr2D 618336772 618338410 1638 False 1881.0 1881 87.433 425 2087 1 chr2D.!!$F1 1662
3 TraesCS2B01G563100 chr2A 749388501 749389644 1143 False 1371.0 1371 88.342 591 1740 1 chr2A.!!$F1 1149

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.178873 TCCTCCCCAAGCTACTGGTT 60.179 55.0 3.76 0.00 34.33 3.67 F
1255 1262 0.038310 ACCTCCTTTTGTAGGCCTGC 59.962 55.0 17.99 16.33 44.37 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1421 1428 0.097674 GTCGTGCTCATCAACATGGC 59.902 55.0 0.0 0.0 0.0 4.40 R
2125 2146 0.392461 TGGCCATCTACTTGAACCGC 60.392 55.0 0.0 0.0 0.0 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.556911 TGAGTTGAATCTCAGCCTCCC 59.443 52.381 0.00 0.00 39.20 4.30
23 24 1.836802 GAGTTGAATCTCAGCCTCCCT 59.163 52.381 0.00 0.00 34.88 4.20
24 25 3.034635 GAGTTGAATCTCAGCCTCCCTA 58.965 50.000 0.00 0.00 34.88 3.53
25 26 3.452627 GAGTTGAATCTCAGCCTCCCTAA 59.547 47.826 0.00 0.00 34.88 2.69
26 27 3.198853 AGTTGAATCTCAGCCTCCCTAAC 59.801 47.826 0.00 0.00 0.00 2.34
27 28 2.119495 TGAATCTCAGCCTCCCTAACC 58.881 52.381 0.00 0.00 0.00 2.85
28 29 2.119495 GAATCTCAGCCTCCCTAACCA 58.881 52.381 0.00 0.00 0.00 3.67
29 30 1.799933 ATCTCAGCCTCCCTAACCAG 58.200 55.000 0.00 0.00 0.00 4.00
30 31 0.710588 TCTCAGCCTCCCTAACCAGA 59.289 55.000 0.00 0.00 0.00 3.86
31 32 0.827368 CTCAGCCTCCCTAACCAGAC 59.173 60.000 0.00 0.00 0.00 3.51
32 33 0.970937 TCAGCCTCCCTAACCAGACG 60.971 60.000 0.00 0.00 0.00 4.18
33 34 1.078710 AGCCTCCCTAACCAGACGT 59.921 57.895 0.00 0.00 0.00 4.34
34 35 0.333993 AGCCTCCCTAACCAGACGTA 59.666 55.000 0.00 0.00 0.00 3.57
35 36 0.459078 GCCTCCCTAACCAGACGTAC 59.541 60.000 0.00 0.00 0.00 3.67
36 37 1.843368 CCTCCCTAACCAGACGTACA 58.157 55.000 0.00 0.00 0.00 2.90
37 38 1.749634 CCTCCCTAACCAGACGTACAG 59.250 57.143 0.00 0.00 0.00 2.74
38 39 2.444421 CTCCCTAACCAGACGTACAGT 58.556 52.381 0.00 0.00 0.00 3.55
39 40 2.824341 CTCCCTAACCAGACGTACAGTT 59.176 50.000 0.00 0.00 0.00 3.16
40 41 2.559668 TCCCTAACCAGACGTACAGTTG 59.440 50.000 6.78 0.00 0.00 3.16
41 42 2.298163 CCCTAACCAGACGTACAGTTGT 59.702 50.000 6.78 0.00 0.00 3.32
42 43 3.572584 CCTAACCAGACGTACAGTTGTC 58.427 50.000 6.78 0.00 35.33 3.18
43 44 3.005050 CCTAACCAGACGTACAGTTGTCA 59.995 47.826 8.01 0.00 37.58 3.58
44 45 2.503920 ACCAGACGTACAGTTGTCAC 57.496 50.000 8.01 0.00 37.58 3.67
45 46 1.752498 ACCAGACGTACAGTTGTCACA 59.248 47.619 8.01 0.00 37.58 3.58
46 47 2.223735 ACCAGACGTACAGTTGTCACAG 60.224 50.000 8.01 0.48 37.58 3.66
47 48 1.787155 CAGACGTACAGTTGTCACAGC 59.213 52.381 8.01 0.00 37.58 4.40
48 49 1.407618 AGACGTACAGTTGTCACAGCA 59.592 47.619 8.01 0.00 37.58 4.41
49 50 2.159156 AGACGTACAGTTGTCACAGCAA 60.159 45.455 8.01 0.00 37.58 3.91
50 51 1.931172 ACGTACAGTTGTCACAGCAAC 59.069 47.619 0.00 1.16 46.49 4.17
56 57 2.475200 GTTGTCACAGCAACTGGAAC 57.525 50.000 0.00 0.00 43.74 3.62
57 58 2.017049 GTTGTCACAGCAACTGGAACT 58.983 47.619 0.00 0.00 43.74 3.01
58 59 1.667236 TGTCACAGCAACTGGAACTG 58.333 50.000 0.00 0.00 35.51 3.16
59 60 0.947244 GTCACAGCAACTGGAACTGG 59.053 55.000 0.00 0.00 35.51 4.00
60 61 0.546122 TCACAGCAACTGGAACTGGT 59.454 50.000 0.00 0.00 35.51 4.00
61 62 0.947244 CACAGCAACTGGAACTGGTC 59.053 55.000 0.00 0.00 35.51 4.02
62 63 0.546122 ACAGCAACTGGAACTGGTCA 59.454 50.000 0.00 0.00 35.51 4.02
63 64 1.064758 ACAGCAACTGGAACTGGTCAA 60.065 47.619 0.00 0.00 35.51 3.18
64 65 2.023673 CAGCAACTGGAACTGGTCAAA 58.976 47.619 0.00 0.00 0.00 2.69
65 66 2.024414 AGCAACTGGAACTGGTCAAAC 58.976 47.619 0.00 0.00 0.00 2.93
66 67 1.748493 GCAACTGGAACTGGTCAAACA 59.252 47.619 0.00 0.00 0.00 2.83
67 68 2.165437 GCAACTGGAACTGGTCAAACAA 59.835 45.455 0.00 0.00 0.00 2.83
68 69 3.367910 GCAACTGGAACTGGTCAAACAAA 60.368 43.478 0.00 0.00 0.00 2.83
69 70 4.173256 CAACTGGAACTGGTCAAACAAAC 58.827 43.478 0.00 0.00 0.00 2.93
70 71 2.758423 ACTGGAACTGGTCAAACAAACC 59.242 45.455 0.00 0.00 37.31 3.27
71 72 3.023832 CTGGAACTGGTCAAACAAACCT 58.976 45.455 0.00 0.00 37.69 3.50
72 73 3.020984 TGGAACTGGTCAAACAAACCTC 58.979 45.455 0.00 0.00 37.69 3.85
73 74 3.288092 GGAACTGGTCAAACAAACCTCT 58.712 45.455 0.00 0.00 37.69 3.69
74 75 3.066760 GGAACTGGTCAAACAAACCTCTG 59.933 47.826 0.00 0.00 37.69 3.35
75 76 3.366052 ACTGGTCAAACAAACCTCTGT 57.634 42.857 0.00 0.00 37.69 3.41
76 77 3.279434 ACTGGTCAAACAAACCTCTGTC 58.721 45.455 0.00 0.00 37.69 3.51
77 78 2.618709 CTGGTCAAACAAACCTCTGTCC 59.381 50.000 0.00 0.00 37.69 4.02
78 79 2.241176 TGGTCAAACAAACCTCTGTCCT 59.759 45.455 0.00 0.00 37.69 3.85
79 80 2.879026 GGTCAAACAAACCTCTGTCCTC 59.121 50.000 0.00 0.00 33.78 3.71
80 81 2.879026 GTCAAACAAACCTCTGTCCTCC 59.121 50.000 0.00 0.00 0.00 4.30
81 82 2.158667 TCAAACAAACCTCTGTCCTCCC 60.159 50.000 0.00 0.00 0.00 4.30
82 83 0.771755 AACAAACCTCTGTCCTCCCC 59.228 55.000 0.00 0.00 0.00 4.81
83 84 0.401395 ACAAACCTCTGTCCTCCCCA 60.401 55.000 0.00 0.00 0.00 4.96
84 85 0.771127 CAAACCTCTGTCCTCCCCAA 59.229 55.000 0.00 0.00 0.00 4.12
85 86 1.068121 AAACCTCTGTCCTCCCCAAG 58.932 55.000 0.00 0.00 0.00 3.61
86 87 1.492993 AACCTCTGTCCTCCCCAAGC 61.493 60.000 0.00 0.00 0.00 4.01
87 88 1.614824 CCTCTGTCCTCCCCAAGCT 60.615 63.158 0.00 0.00 0.00 3.74
88 89 0.325671 CCTCTGTCCTCCCCAAGCTA 60.326 60.000 0.00 0.00 0.00 3.32
89 90 0.827368 CTCTGTCCTCCCCAAGCTAC 59.173 60.000 0.00 0.00 0.00 3.58
90 91 0.413832 TCTGTCCTCCCCAAGCTACT 59.586 55.000 0.00 0.00 0.00 2.57
91 92 0.539051 CTGTCCTCCCCAAGCTACTG 59.461 60.000 0.00 0.00 0.00 2.74
92 93 0.909610 TGTCCTCCCCAAGCTACTGG 60.910 60.000 0.00 0.00 36.10 4.00
93 94 0.910088 GTCCTCCCCAAGCTACTGGT 60.910 60.000 3.76 0.00 34.33 4.00
94 95 0.178873 TCCTCCCCAAGCTACTGGTT 60.179 55.000 3.76 0.00 34.33 3.67
95 96 0.253327 CCTCCCCAAGCTACTGGTTC 59.747 60.000 3.76 0.00 34.33 3.62
96 97 1.280457 CTCCCCAAGCTACTGGTTCT 58.720 55.000 3.76 0.00 34.33 3.01
97 98 2.467880 CTCCCCAAGCTACTGGTTCTA 58.532 52.381 3.76 0.00 34.33 2.10
98 99 3.041946 CTCCCCAAGCTACTGGTTCTAT 58.958 50.000 3.76 0.00 34.33 1.98
99 100 3.039011 TCCCCAAGCTACTGGTTCTATC 58.961 50.000 3.76 0.00 34.33 2.08
100 101 3.041946 CCCCAAGCTACTGGTTCTATCT 58.958 50.000 3.76 0.00 34.33 1.98
101 102 4.078805 TCCCCAAGCTACTGGTTCTATCTA 60.079 45.833 3.76 0.00 34.33 1.98
102 103 4.841246 CCCCAAGCTACTGGTTCTATCTAT 59.159 45.833 3.76 0.00 34.33 1.98
103 104 5.046950 CCCCAAGCTACTGGTTCTATCTATC 60.047 48.000 3.76 0.00 34.33 2.08
104 105 5.540337 CCCAAGCTACTGGTTCTATCTATCA 59.460 44.000 3.76 0.00 34.33 2.15
105 106 6.451393 CCAAGCTACTGGTTCTATCTATCAC 58.549 44.000 0.00 0.00 0.00 3.06
106 107 6.266558 CCAAGCTACTGGTTCTATCTATCACT 59.733 42.308 0.00 0.00 0.00 3.41
107 108 7.201956 CCAAGCTACTGGTTCTATCTATCACTT 60.202 40.741 0.00 0.00 0.00 3.16
108 109 7.519032 AGCTACTGGTTCTATCTATCACTTC 57.481 40.000 0.00 0.00 0.00 3.01
109 110 6.492087 AGCTACTGGTTCTATCTATCACTTCC 59.508 42.308 0.00 0.00 0.00 3.46
110 111 6.294843 GCTACTGGTTCTATCTATCACTTCCC 60.295 46.154 0.00 0.00 0.00 3.97
111 112 5.782925 ACTGGTTCTATCTATCACTTCCCT 58.217 41.667 0.00 0.00 0.00 4.20
112 113 6.206042 ACTGGTTCTATCTATCACTTCCCTT 58.794 40.000 0.00 0.00 0.00 3.95
113 114 6.674419 ACTGGTTCTATCTATCACTTCCCTTT 59.326 38.462 0.00 0.00 0.00 3.11
114 115 7.844779 ACTGGTTCTATCTATCACTTCCCTTTA 59.155 37.037 0.00 0.00 0.00 1.85
115 116 8.019656 TGGTTCTATCTATCACTTCCCTTTAC 57.980 38.462 0.00 0.00 0.00 2.01
116 117 7.844779 TGGTTCTATCTATCACTTCCCTTTACT 59.155 37.037 0.00 0.00 0.00 2.24
117 118 8.706521 GGTTCTATCTATCACTTCCCTTTACTT 58.293 37.037 0.00 0.00 0.00 2.24
120 121 9.931698 TCTATCTATCACTTCCCTTTACTTACA 57.068 33.333 0.00 0.00 0.00 2.41
122 123 8.611051 ATCTATCACTTCCCTTTACTTACAGT 57.389 34.615 0.00 0.00 0.00 3.55
123 124 8.431910 TCTATCACTTCCCTTTACTTACAGTT 57.568 34.615 0.00 0.00 0.00 3.16
124 125 8.877195 TCTATCACTTCCCTTTACTTACAGTTT 58.123 33.333 0.00 0.00 0.00 2.66
127 128 9.668497 ATCACTTCCCTTTACTTACAGTTTATC 57.332 33.333 0.00 0.00 0.00 1.75
128 129 8.877195 TCACTTCCCTTTACTTACAGTTTATCT 58.123 33.333 0.00 0.00 0.00 1.98
129 130 9.503399 CACTTCCCTTTACTTACAGTTTATCTT 57.497 33.333 0.00 0.00 0.00 2.40
130 131 9.722184 ACTTCCCTTTACTTACAGTTTATCTTC 57.278 33.333 0.00 0.00 0.00 2.87
131 132 8.767478 TTCCCTTTACTTACAGTTTATCTTCG 57.233 34.615 0.00 0.00 0.00 3.79
132 133 7.899973 TCCCTTTACTTACAGTTTATCTTCGT 58.100 34.615 0.00 0.00 0.00 3.85
133 134 7.816031 TCCCTTTACTTACAGTTTATCTTCGTG 59.184 37.037 0.00 0.00 0.00 4.35
134 135 7.816031 CCCTTTACTTACAGTTTATCTTCGTGA 59.184 37.037 0.00 0.00 0.00 4.35
135 136 9.199982 CCTTTACTTACAGTTTATCTTCGTGAA 57.800 33.333 0.00 0.00 0.00 3.18
137 138 9.754382 TTTACTTACAGTTTATCTTCGTGAAGT 57.246 29.630 9.29 0.00 39.38 3.01
138 139 7.870588 ACTTACAGTTTATCTTCGTGAAGTC 57.129 36.000 9.29 0.00 39.38 3.01
139 140 7.431249 ACTTACAGTTTATCTTCGTGAAGTCA 58.569 34.615 9.29 0.00 39.38 3.41
140 141 8.088981 ACTTACAGTTTATCTTCGTGAAGTCAT 58.911 33.333 9.29 0.15 39.38 3.06
141 142 8.827177 TTACAGTTTATCTTCGTGAAGTCATT 57.173 30.769 9.29 0.00 39.38 2.57
142 143 7.121974 ACAGTTTATCTTCGTGAAGTCATTG 57.878 36.000 9.29 5.26 39.38 2.82
143 144 6.017933 CAGTTTATCTTCGTGAAGTCATTGC 58.982 40.000 9.29 0.00 39.38 3.56
144 145 5.122396 AGTTTATCTTCGTGAAGTCATTGCC 59.878 40.000 9.29 0.00 39.38 4.52
145 146 2.839486 TCTTCGTGAAGTCATTGCCT 57.161 45.000 9.29 0.00 39.38 4.75
146 147 2.416747 TCTTCGTGAAGTCATTGCCTG 58.583 47.619 9.29 0.00 39.38 4.85
147 148 0.874390 TTCGTGAAGTCATTGCCTGC 59.126 50.000 0.00 0.00 0.00 4.85
148 149 0.250252 TCGTGAAGTCATTGCCTGCA 60.250 50.000 0.00 0.00 0.00 4.41
149 150 0.806868 CGTGAAGTCATTGCCTGCAT 59.193 50.000 0.00 0.00 0.00 3.96
150 151 1.466866 CGTGAAGTCATTGCCTGCATG 60.467 52.381 0.00 0.00 0.00 4.06
151 152 0.528924 TGAAGTCATTGCCTGCATGC 59.471 50.000 11.82 11.82 0.00 4.06
152 153 0.528924 GAAGTCATTGCCTGCATGCA 59.471 50.000 21.29 21.29 40.07 3.96
153 154 1.136305 GAAGTCATTGCCTGCATGCAT 59.864 47.619 22.97 2.13 41.70 3.96
154 155 1.191535 AGTCATTGCCTGCATGCATT 58.808 45.000 22.97 11.28 41.70 3.56
155 156 2.380941 AGTCATTGCCTGCATGCATTA 58.619 42.857 22.97 7.73 41.70 1.90
156 157 2.963101 AGTCATTGCCTGCATGCATTAT 59.037 40.909 22.97 9.31 41.70 1.28
157 158 3.005472 AGTCATTGCCTGCATGCATTATC 59.995 43.478 22.97 10.89 41.70 1.75
158 159 3.005472 GTCATTGCCTGCATGCATTATCT 59.995 43.478 22.97 3.51 41.70 1.98
159 160 3.005367 TCATTGCCTGCATGCATTATCTG 59.995 43.478 22.97 15.81 41.70 2.90
160 161 2.061509 TGCCTGCATGCATTATCTGT 57.938 45.000 22.97 0.00 36.04 3.41
161 162 2.380941 TGCCTGCATGCATTATCTGTT 58.619 42.857 22.97 0.00 36.04 3.16
162 163 2.761767 TGCCTGCATGCATTATCTGTTT 59.238 40.909 22.97 0.00 36.04 2.83
163 164 3.120792 GCCTGCATGCATTATCTGTTTG 58.879 45.455 22.97 4.99 0.00 2.93
164 165 3.181484 GCCTGCATGCATTATCTGTTTGA 60.181 43.478 22.97 0.00 0.00 2.69
165 166 4.357142 CCTGCATGCATTATCTGTTTGAC 58.643 43.478 22.97 0.00 0.00 3.18
166 167 4.097437 CCTGCATGCATTATCTGTTTGACT 59.903 41.667 22.97 0.00 0.00 3.41
167 168 5.393787 CCTGCATGCATTATCTGTTTGACTT 60.394 40.000 22.97 0.00 0.00 3.01
168 169 5.643664 TGCATGCATTATCTGTTTGACTTC 58.356 37.500 18.46 0.00 0.00 3.01
169 170 5.183522 TGCATGCATTATCTGTTTGACTTCA 59.816 36.000 18.46 0.00 0.00 3.02
170 171 5.514204 GCATGCATTATCTGTTTGACTTCAC 59.486 40.000 14.21 0.00 0.00 3.18
171 172 6.624423 GCATGCATTATCTGTTTGACTTCACT 60.624 38.462 14.21 0.00 0.00 3.41
172 173 6.245115 TGCATTATCTGTTTGACTTCACTG 57.755 37.500 0.00 0.00 0.00 3.66
173 174 5.091431 GCATTATCTGTTTGACTTCACTGC 58.909 41.667 0.00 0.00 0.00 4.40
174 175 5.335113 GCATTATCTGTTTGACTTCACTGCA 60.335 40.000 0.00 0.00 0.00 4.41
175 176 6.624423 GCATTATCTGTTTGACTTCACTGCAT 60.624 38.462 0.00 0.00 0.00 3.96
176 177 4.761235 ATCTGTTTGACTTCACTGCATG 57.239 40.909 0.00 0.00 0.00 4.06
177 178 3.807553 TCTGTTTGACTTCACTGCATGA 58.192 40.909 0.00 0.00 34.65 3.07
178 179 3.561310 TCTGTTTGACTTCACTGCATGAC 59.439 43.478 0.00 0.00 36.92 3.06
179 180 3.544684 TGTTTGACTTCACTGCATGACT 58.455 40.909 0.00 0.00 36.92 3.41
180 181 4.702831 TGTTTGACTTCACTGCATGACTA 58.297 39.130 0.00 0.00 36.92 2.59
181 182 4.511454 TGTTTGACTTCACTGCATGACTAC 59.489 41.667 0.00 0.00 36.92 2.73
182 183 4.607293 TTGACTTCACTGCATGACTACT 57.393 40.909 0.00 0.00 36.92 2.57
183 184 4.607293 TGACTTCACTGCATGACTACTT 57.393 40.909 0.00 0.00 36.92 2.24
184 185 4.309933 TGACTTCACTGCATGACTACTTG 58.690 43.478 0.00 0.00 36.92 3.16
185 186 4.202253 TGACTTCACTGCATGACTACTTGT 60.202 41.667 0.00 0.00 36.92 3.16
186 187 4.708177 ACTTCACTGCATGACTACTTGTT 58.292 39.130 0.00 0.00 36.92 2.83
187 188 4.752101 ACTTCACTGCATGACTACTTGTTC 59.248 41.667 0.00 0.00 36.92 3.18
188 189 4.607293 TCACTGCATGACTACTTGTTCT 57.393 40.909 0.00 0.00 29.99 3.01
189 190 4.309933 TCACTGCATGACTACTTGTTCTG 58.690 43.478 0.00 0.00 29.99 3.02
190 191 4.039124 TCACTGCATGACTACTTGTTCTGA 59.961 41.667 0.00 0.00 29.99 3.27
191 192 4.934001 CACTGCATGACTACTTGTTCTGAT 59.066 41.667 0.00 0.00 0.00 2.90
192 193 5.410746 CACTGCATGACTACTTGTTCTGATT 59.589 40.000 0.00 0.00 0.00 2.57
193 194 5.410746 ACTGCATGACTACTTGTTCTGATTG 59.589 40.000 0.00 0.00 0.00 2.67
194 195 4.696877 TGCATGACTACTTGTTCTGATTGG 59.303 41.667 0.00 0.00 0.00 3.16
195 196 4.437930 GCATGACTACTTGTTCTGATTGGC 60.438 45.833 0.00 0.00 0.00 4.52
196 197 4.623932 TGACTACTTGTTCTGATTGGCT 57.376 40.909 0.00 0.00 0.00 4.75
197 198 4.973168 TGACTACTTGTTCTGATTGGCTT 58.027 39.130 0.00 0.00 0.00 4.35
198 199 4.997395 TGACTACTTGTTCTGATTGGCTTC 59.003 41.667 0.00 0.00 0.00 3.86
199 200 4.973168 ACTACTTGTTCTGATTGGCTTCA 58.027 39.130 0.00 0.00 0.00 3.02
200 201 5.564550 ACTACTTGTTCTGATTGGCTTCAT 58.435 37.500 0.00 0.00 0.00 2.57
201 202 6.711277 ACTACTTGTTCTGATTGGCTTCATA 58.289 36.000 0.00 0.00 0.00 2.15
202 203 5.886960 ACTTGTTCTGATTGGCTTCATAC 57.113 39.130 0.00 0.00 0.00 2.39
203 204 5.564550 ACTTGTTCTGATTGGCTTCATACT 58.435 37.500 0.00 0.00 0.00 2.12
204 205 6.711277 ACTTGTTCTGATTGGCTTCATACTA 58.289 36.000 0.00 0.00 0.00 1.82
205 206 7.341805 ACTTGTTCTGATTGGCTTCATACTAT 58.658 34.615 0.00 0.00 0.00 2.12
206 207 7.497249 ACTTGTTCTGATTGGCTTCATACTATC 59.503 37.037 0.00 0.00 0.00 2.08
207 208 7.129457 TGTTCTGATTGGCTTCATACTATCT 57.871 36.000 0.00 0.00 0.00 1.98
208 209 7.568349 TGTTCTGATTGGCTTCATACTATCTT 58.432 34.615 0.00 0.00 0.00 2.40
209 210 7.712639 TGTTCTGATTGGCTTCATACTATCTTC 59.287 37.037 0.00 0.00 0.00 2.87
210 211 6.763355 TCTGATTGGCTTCATACTATCTTCC 58.237 40.000 0.00 0.00 0.00 3.46
211 212 6.327365 TCTGATTGGCTTCATACTATCTTCCA 59.673 38.462 0.00 0.00 0.00 3.53
212 213 7.016957 TCTGATTGGCTTCATACTATCTTCCAT 59.983 37.037 0.00 0.00 0.00 3.41
213 214 7.164122 TGATTGGCTTCATACTATCTTCCATC 58.836 38.462 0.00 0.00 0.00 3.51
214 215 5.489792 TGGCTTCATACTATCTTCCATCC 57.510 43.478 0.00 0.00 0.00 3.51
215 216 5.158141 TGGCTTCATACTATCTTCCATCCT 58.842 41.667 0.00 0.00 0.00 3.24
216 217 5.012458 TGGCTTCATACTATCTTCCATCCTG 59.988 44.000 0.00 0.00 0.00 3.86
217 218 5.247110 GGCTTCATACTATCTTCCATCCTGA 59.753 44.000 0.00 0.00 0.00 3.86
218 219 6.070309 GGCTTCATACTATCTTCCATCCTGAT 60.070 42.308 0.00 0.00 0.00 2.90
219 220 7.041107 GCTTCATACTATCTTCCATCCTGATC 58.959 42.308 0.00 0.00 0.00 2.92
220 221 7.487822 TTCATACTATCTTCCATCCTGATCC 57.512 40.000 0.00 0.00 0.00 3.36
221 222 6.809428 TCATACTATCTTCCATCCTGATCCT 58.191 40.000 0.00 0.00 0.00 3.24
222 223 7.251936 TCATACTATCTTCCATCCTGATCCTT 58.748 38.462 0.00 0.00 0.00 3.36
223 224 8.401894 TCATACTATCTTCCATCCTGATCCTTA 58.598 37.037 0.00 0.00 0.00 2.69
224 225 6.926630 ACTATCTTCCATCCTGATCCTTAC 57.073 41.667 0.00 0.00 0.00 2.34
225 226 6.629156 ACTATCTTCCATCCTGATCCTTACT 58.371 40.000 0.00 0.00 0.00 2.24
226 227 7.770662 ACTATCTTCCATCCTGATCCTTACTA 58.229 38.462 0.00 0.00 0.00 1.82
227 228 8.405850 ACTATCTTCCATCCTGATCCTTACTAT 58.594 37.037 0.00 0.00 0.00 2.12
228 229 7.732222 ATCTTCCATCCTGATCCTTACTATC 57.268 40.000 0.00 0.00 0.00 2.08
229 230 6.868826 TCTTCCATCCTGATCCTTACTATCT 58.131 40.000 0.00 0.00 0.00 1.98
230 231 8.001300 TCTTCCATCCTGATCCTTACTATCTA 57.999 38.462 0.00 0.00 0.00 1.98
231 232 8.112822 TCTTCCATCCTGATCCTTACTATCTAG 58.887 40.741 0.00 0.00 0.00 2.43
232 233 6.191315 TCCATCCTGATCCTTACTATCTAGC 58.809 44.000 0.00 0.00 0.00 3.42
233 234 6.011185 TCCATCCTGATCCTTACTATCTAGCT 60.011 42.308 0.00 0.00 0.00 3.32
234 235 6.096705 CCATCCTGATCCTTACTATCTAGCTG 59.903 46.154 0.00 0.00 0.00 4.24
235 236 5.013547 TCCTGATCCTTACTATCTAGCTGC 58.986 45.833 0.00 0.00 0.00 5.25
236 237 5.016173 CCTGATCCTTACTATCTAGCTGCT 58.984 45.833 7.57 7.57 0.00 4.24
237 238 6.012421 TCCTGATCCTTACTATCTAGCTGCTA 60.012 42.308 9.34 9.34 0.00 3.49
238 239 6.661377 CCTGATCCTTACTATCTAGCTGCTAA 59.339 42.308 11.02 2.74 0.00 3.09
239 240 7.341769 CCTGATCCTTACTATCTAGCTGCTAAT 59.658 40.741 11.02 9.55 0.00 1.73
240 241 9.402320 CTGATCCTTACTATCTAGCTGCTAATA 57.598 37.037 11.02 10.11 0.00 0.98
241 242 9.402320 TGATCCTTACTATCTAGCTGCTAATAG 57.598 37.037 22.85 22.85 0.00 1.73
242 243 9.403583 GATCCTTACTATCTAGCTGCTAATAGT 57.596 37.037 27.62 27.62 38.26 2.12
243 244 8.795842 TCCTTACTATCTAGCTGCTAATAGTC 57.204 38.462 27.98 0.00 36.57 2.59
244 245 8.607713 TCCTTACTATCTAGCTGCTAATAGTCT 58.392 37.037 27.98 17.58 36.57 3.24
245 246 9.238368 CCTTACTATCTAGCTGCTAATAGTCTT 57.762 37.037 27.98 17.16 36.57 3.01
249 250 9.226606 ACTATCTAGCTGCTAATAGTCTTAGTG 57.773 37.037 23.64 7.73 30.98 2.74
250 251 6.320494 TCTAGCTGCTAATAGTCTTAGTGC 57.680 41.667 11.02 7.06 0.00 4.40
251 252 6.065374 TCTAGCTGCTAATAGTCTTAGTGCT 58.935 40.000 11.02 15.99 37.53 4.40
252 253 5.606348 AGCTGCTAATAGTCTTAGTGCTT 57.394 39.130 0.00 0.68 33.65 3.91
253 254 5.983540 AGCTGCTAATAGTCTTAGTGCTTT 58.016 37.500 0.00 0.00 33.65 3.51
254 255 6.045955 AGCTGCTAATAGTCTTAGTGCTTTC 58.954 40.000 0.00 0.00 33.65 2.62
255 256 5.812642 GCTGCTAATAGTCTTAGTGCTTTCA 59.187 40.000 0.00 0.00 0.00 2.69
256 257 6.237969 GCTGCTAATAGTCTTAGTGCTTTCAC 60.238 42.308 0.00 0.00 43.44 3.18
271 272 7.558435 GTGCTTTCACTTCATTGAATACTTG 57.442 36.000 0.00 0.00 40.03 3.16
272 273 7.362662 GTGCTTTCACTTCATTGAATACTTGA 58.637 34.615 0.00 0.00 40.03 3.02
273 274 7.324616 GTGCTTTCACTTCATTGAATACTTGAC 59.675 37.037 0.00 0.00 40.03 3.18
274 275 7.229306 TGCTTTCACTTCATTGAATACTTGACT 59.771 33.333 0.00 0.00 35.42 3.41
275 276 8.721478 GCTTTCACTTCATTGAATACTTGACTA 58.279 33.333 0.00 0.00 35.42 2.59
278 279 8.722480 TCACTTCATTGAATACTTGACTATGG 57.278 34.615 0.00 0.00 0.00 2.74
279 280 7.280876 TCACTTCATTGAATACTTGACTATGGC 59.719 37.037 0.00 0.00 0.00 4.40
280 281 7.281774 CACTTCATTGAATACTTGACTATGGCT 59.718 37.037 0.00 0.00 0.00 4.75
281 282 7.831193 ACTTCATTGAATACTTGACTATGGCTT 59.169 33.333 0.00 0.00 0.00 4.35
282 283 7.558161 TCATTGAATACTTGACTATGGCTTG 57.442 36.000 0.00 0.00 0.00 4.01
283 284 5.818136 TTGAATACTTGACTATGGCTTGC 57.182 39.130 0.00 0.00 0.00 4.01
284 285 4.199310 TGAATACTTGACTATGGCTTGCC 58.801 43.478 4.43 4.43 0.00 4.52
285 286 4.080356 TGAATACTTGACTATGGCTTGCCT 60.080 41.667 13.18 1.45 0.00 4.75
286 287 5.130311 TGAATACTTGACTATGGCTTGCCTA 59.870 40.000 13.18 0.00 0.00 3.93
287 288 3.550437 ACTTGACTATGGCTTGCCTAG 57.450 47.619 13.18 13.06 0.00 3.02
288 289 2.840651 ACTTGACTATGGCTTGCCTAGT 59.159 45.455 13.18 15.72 0.00 2.57
289 290 2.988010 TGACTATGGCTTGCCTAGTG 57.012 50.000 20.27 9.42 0.00 2.74
290 291 2.187958 TGACTATGGCTTGCCTAGTGT 58.812 47.619 20.27 11.76 0.00 3.55
291 292 3.371034 TGACTATGGCTTGCCTAGTGTA 58.629 45.455 20.27 11.35 0.00 2.90
292 293 3.384789 TGACTATGGCTTGCCTAGTGTAG 59.615 47.826 20.27 13.46 0.00 2.74
293 294 3.375699 ACTATGGCTTGCCTAGTGTAGT 58.624 45.455 13.18 9.78 0.00 2.73
294 295 2.990066 ATGGCTTGCCTAGTGTAGTC 57.010 50.000 13.18 0.00 0.00 2.59
295 296 1.938585 TGGCTTGCCTAGTGTAGTCT 58.061 50.000 13.18 0.00 0.00 3.24
296 297 3.095912 TGGCTTGCCTAGTGTAGTCTA 57.904 47.619 13.18 0.00 0.00 2.59
297 298 2.758979 TGGCTTGCCTAGTGTAGTCTAC 59.241 50.000 13.18 2.81 0.00 2.59
298 299 2.101082 GGCTTGCCTAGTGTAGTCTACC 59.899 54.545 7.56 0.00 0.00 3.18
299 300 3.025262 GCTTGCCTAGTGTAGTCTACCT 58.975 50.000 7.56 6.85 0.00 3.08
300 301 3.447944 GCTTGCCTAGTGTAGTCTACCTT 59.552 47.826 7.56 0.00 0.00 3.50
301 302 4.440387 GCTTGCCTAGTGTAGTCTACCTTC 60.440 50.000 7.56 0.00 0.00 3.46
302 303 4.587976 TGCCTAGTGTAGTCTACCTTCT 57.412 45.455 7.56 6.22 0.00 2.85
303 304 4.270834 TGCCTAGTGTAGTCTACCTTCTG 58.729 47.826 7.56 0.00 0.00 3.02
304 305 3.067040 GCCTAGTGTAGTCTACCTTCTGC 59.933 52.174 7.56 2.05 0.00 4.26
305 306 4.528920 CCTAGTGTAGTCTACCTTCTGCT 58.471 47.826 7.56 0.12 0.00 4.24
306 307 4.336993 CCTAGTGTAGTCTACCTTCTGCTG 59.663 50.000 7.56 0.00 0.00 4.41
307 308 2.494073 AGTGTAGTCTACCTTCTGCTGC 59.506 50.000 7.56 0.00 0.00 5.25
308 309 2.231478 GTGTAGTCTACCTTCTGCTGCA 59.769 50.000 7.56 0.88 0.00 4.41
309 310 3.099905 TGTAGTCTACCTTCTGCTGCAT 58.900 45.455 1.31 0.00 0.00 3.96
310 311 4.098044 GTGTAGTCTACCTTCTGCTGCATA 59.902 45.833 1.31 0.00 0.00 3.14
311 312 4.895889 TGTAGTCTACCTTCTGCTGCATAT 59.104 41.667 1.31 0.00 0.00 1.78
312 313 4.333913 AGTCTACCTTCTGCTGCATATG 57.666 45.455 1.31 0.00 0.00 1.78
313 314 3.963374 AGTCTACCTTCTGCTGCATATGA 59.037 43.478 6.97 0.00 0.00 2.15
314 315 4.406972 AGTCTACCTTCTGCTGCATATGAA 59.593 41.667 6.97 2.54 0.00 2.57
315 316 5.071519 AGTCTACCTTCTGCTGCATATGAAT 59.928 40.000 6.97 0.00 0.00 2.57
316 317 6.268617 AGTCTACCTTCTGCTGCATATGAATA 59.731 38.462 6.97 0.00 0.00 1.75
317 318 6.589523 GTCTACCTTCTGCTGCATATGAATAG 59.410 42.308 6.97 3.99 0.00 1.73
318 319 5.301835 ACCTTCTGCTGCATATGAATAGT 57.698 39.130 6.97 1.93 0.00 2.12
319 320 5.061853 ACCTTCTGCTGCATATGAATAGTG 58.938 41.667 6.97 0.19 0.00 2.74
320 321 5.061853 CCTTCTGCTGCATATGAATAGTGT 58.938 41.667 6.97 0.00 0.00 3.55
321 322 5.178996 CCTTCTGCTGCATATGAATAGTGTC 59.821 44.000 6.97 0.00 0.00 3.67
322 323 5.280654 TCTGCTGCATATGAATAGTGTCA 57.719 39.130 6.97 0.00 0.00 3.58
323 324 5.861727 TCTGCTGCATATGAATAGTGTCAT 58.138 37.500 6.97 0.00 41.21 3.06
324 325 6.293698 TCTGCTGCATATGAATAGTGTCATT 58.706 36.000 6.97 0.00 39.07 2.57
325 326 6.769341 TCTGCTGCATATGAATAGTGTCATTT 59.231 34.615 6.97 0.00 39.07 2.32
326 327 6.962686 TGCTGCATATGAATAGTGTCATTTC 58.037 36.000 6.97 0.00 39.07 2.17
327 328 6.769341 TGCTGCATATGAATAGTGTCATTTCT 59.231 34.615 6.97 0.00 39.07 2.52
328 329 7.933033 TGCTGCATATGAATAGTGTCATTTCTA 59.067 33.333 6.97 0.00 39.07 2.10
329 330 8.944029 GCTGCATATGAATAGTGTCATTTCTAT 58.056 33.333 6.97 0.00 39.07 1.98
341 342 8.023050 AGTGTCATTTCTATTGTTTCTCTTCG 57.977 34.615 0.00 0.00 0.00 3.79
342 343 7.872993 AGTGTCATTTCTATTGTTTCTCTTCGA 59.127 33.333 0.00 0.00 0.00 3.71
343 344 8.495949 GTGTCATTTCTATTGTTTCTCTTCGAA 58.504 33.333 0.00 0.00 0.00 3.71
344 345 9.051679 TGTCATTTCTATTGTTTCTCTTCGAAA 57.948 29.630 0.00 0.00 39.23 3.46
353 354 4.351874 TTTCTCTTCGAAACTCCCATGT 57.648 40.909 0.00 0.00 36.72 3.21
354 355 4.351874 TTCTCTTCGAAACTCCCATGTT 57.648 40.909 0.00 0.00 0.00 2.71
355 356 4.351874 TCTCTTCGAAACTCCCATGTTT 57.648 40.909 0.00 0.00 42.11 2.83
356 357 4.714632 TCTCTTCGAAACTCCCATGTTTT 58.285 39.130 0.00 0.00 39.86 2.43
357 358 4.515191 TCTCTTCGAAACTCCCATGTTTTG 59.485 41.667 0.00 0.00 39.86 2.44
358 359 4.456535 TCTTCGAAACTCCCATGTTTTGA 58.543 39.130 0.00 6.10 44.15 2.69
360 361 4.829064 TCGAAACTCCCATGTTTTGAAG 57.171 40.909 7.38 0.00 43.39 3.02
361 362 4.456535 TCGAAACTCCCATGTTTTGAAGA 58.543 39.130 7.38 0.00 43.39 2.87
362 363 4.274950 TCGAAACTCCCATGTTTTGAAGAC 59.725 41.667 7.38 0.00 43.39 3.01
363 364 4.275936 CGAAACTCCCATGTTTTGAAGACT 59.724 41.667 0.00 0.00 41.45 3.24
364 365 5.221048 CGAAACTCCCATGTTTTGAAGACTT 60.221 40.000 0.00 0.00 41.45 3.01
365 366 5.774498 AACTCCCATGTTTTGAAGACTTC 57.226 39.130 8.34 8.34 0.00 3.01
366 367 4.145052 ACTCCCATGTTTTGAAGACTTCC 58.855 43.478 12.66 0.00 0.00 3.46
367 368 4.144297 CTCCCATGTTTTGAAGACTTCCA 58.856 43.478 12.66 3.75 0.00 3.53
368 369 4.739793 TCCCATGTTTTGAAGACTTCCAT 58.260 39.130 12.66 5.89 0.00 3.41
369 370 5.886609 TCCCATGTTTTGAAGACTTCCATA 58.113 37.500 12.66 0.00 0.00 2.74
370 371 6.310941 TCCCATGTTTTGAAGACTTCCATAA 58.689 36.000 12.66 2.13 0.00 1.90
371 372 6.780031 TCCCATGTTTTGAAGACTTCCATAAA 59.220 34.615 12.66 7.70 0.00 1.40
372 373 7.288852 TCCCATGTTTTGAAGACTTCCATAAAA 59.711 33.333 12.66 9.67 0.00 1.52
373 374 7.930865 CCCATGTTTTGAAGACTTCCATAAAAA 59.069 33.333 12.66 9.35 0.00 1.94
374 375 9.492973 CCATGTTTTGAAGACTTCCATAAAAAT 57.507 29.630 12.66 8.12 0.00 1.82
377 378 9.528018 TGTTTTGAAGACTTCCATAAAAATCAC 57.472 29.630 12.66 3.61 0.00 3.06
378 379 8.978539 GTTTTGAAGACTTCCATAAAAATCACC 58.021 33.333 12.66 0.00 0.00 4.02
379 380 8.477419 TTTGAAGACTTCCATAAAAATCACCT 57.523 30.769 12.66 0.00 0.00 4.00
380 381 9.581289 TTTGAAGACTTCCATAAAAATCACCTA 57.419 29.630 12.66 0.00 0.00 3.08
381 382 9.753674 TTGAAGACTTCCATAAAAATCACCTAT 57.246 29.630 12.66 0.00 0.00 2.57
382 383 9.753674 TGAAGACTTCCATAAAAATCACCTATT 57.246 29.630 12.66 0.00 0.00 1.73
384 385 9.753674 AAGACTTCCATAAAAATCACCTATTCA 57.246 29.630 0.00 0.00 0.00 2.57
385 386 9.178758 AGACTTCCATAAAAATCACCTATTCAC 57.821 33.333 0.00 0.00 0.00 3.18
386 387 8.293699 ACTTCCATAAAAATCACCTATTCACC 57.706 34.615 0.00 0.00 0.00 4.02
387 388 7.342026 ACTTCCATAAAAATCACCTATTCACCC 59.658 37.037 0.00 0.00 0.00 4.61
388 389 6.133356 TCCATAAAAATCACCTATTCACCCC 58.867 40.000 0.00 0.00 0.00 4.95
389 390 5.304357 CCATAAAAATCACCTATTCACCCCC 59.696 44.000 0.00 0.00 0.00 5.40
454 455 4.036262 TCGCTACTTGCTGAAACACAAATT 59.964 37.500 0.00 0.00 40.11 1.82
456 457 5.280945 GCTACTTGCTGAAACACAAATTCA 58.719 37.500 0.00 0.00 38.95 2.57
475 476 3.849911 TCATTCTCAAGTTGCTACGAGG 58.150 45.455 0.00 0.00 0.00 4.63
562 563 8.019669 CCTCAAGTTTTCTCTCATATGTTTGTG 58.980 37.037 1.90 0.00 0.00 3.33
564 565 8.559536 TCAAGTTTTCTCTCATATGTTTGTGTC 58.440 33.333 1.90 0.00 0.00 3.67
565 566 8.562892 CAAGTTTTCTCTCATATGTTTGTGTCT 58.437 33.333 1.90 0.00 0.00 3.41
566 567 9.778741 AAGTTTTCTCTCATATGTTTGTGTCTA 57.221 29.630 1.90 0.00 0.00 2.59
567 568 9.778741 AGTTTTCTCTCATATGTTTGTGTCTAA 57.221 29.630 1.90 0.00 0.00 2.10
570 571 9.942850 TTTCTCTCATATGTTTGTGTCTAATGA 57.057 29.630 1.90 0.00 0.00 2.57
571 572 9.942850 TTCTCTCATATGTTTGTGTCTAATGAA 57.057 29.630 1.90 0.00 0.00 2.57
574 575 8.615211 TCTCATATGTTTGTGTCTAATGAATGC 58.385 33.333 1.90 0.00 0.00 3.56
575 576 8.278729 TCATATGTTTGTGTCTAATGAATGCA 57.721 30.769 1.90 0.00 0.00 3.96
576 577 8.905850 TCATATGTTTGTGTCTAATGAATGCAT 58.094 29.630 1.90 0.00 35.92 3.96
577 578 9.524106 CATATGTTTGTGTCTAATGAATGCATT 57.476 29.630 12.83 12.83 46.11 3.56
579 580 8.836268 ATGTTTGTGTCTAATGAATGCATTTT 57.164 26.923 14.33 7.49 41.87 1.82
580 581 8.659925 TGTTTGTGTCTAATGAATGCATTTTT 57.340 26.923 14.33 12.74 41.87 1.94
671 672 4.711846 GGGCAAGGAGACTGGAATTAATTT 59.288 41.667 1.43 0.00 42.68 1.82
721 722 0.460987 GCGGAGGATCTGGTGACAAG 60.461 60.000 0.00 0.00 43.35 3.16
826 827 0.678950 TGTTCGCAGTGGATCAGACA 59.321 50.000 0.00 0.00 0.00 3.41
827 828 1.071605 GTTCGCAGTGGATCAGACAC 58.928 55.000 0.00 0.00 39.10 3.67
856 857 7.340122 TGATCAAACAATTGTAGTTTCACCA 57.660 32.000 12.39 0.66 37.10 4.17
913 916 7.332678 GGATCTTTGTTTCTCCATTCAAATTGG 59.667 37.037 0.00 0.00 31.08 3.16
977 980 1.144936 GAAGAGGGTATGCAGCGCT 59.855 57.895 2.64 2.64 0.00 5.92
1043 1046 8.011106 CGTCTATAGTTTCGGAGTTATTCTCTC 58.989 40.741 0.00 0.00 42.40 3.20
1100 1103 1.459450 GGCCTCCTTTCGCATGTAAA 58.541 50.000 0.00 0.00 0.00 2.01
1145 1148 7.515841 GCATCCGCATCTTATAGTTAATCGATG 60.516 40.741 0.00 0.00 38.36 3.84
1237 1244 6.701400 ACACAGCTTTATGATTGTTGGAAAAC 59.299 34.615 0.00 0.00 0.00 2.43
1255 1262 0.038310 ACCTCCTTTTGTAGGCCTGC 59.962 55.000 17.99 16.33 44.37 4.85
1268 1275 2.671070 CCTGCGGATTGTGGGAGT 59.329 61.111 0.00 0.00 0.00 3.85
1270 1277 1.296392 CTGCGGATTGTGGGAGTCA 59.704 57.895 0.00 0.00 0.00 3.41
1295 1302 0.173708 GATCGCGGAACTTCTGGACT 59.826 55.000 6.13 0.00 0.00 3.85
1314 1321 4.505039 GGACTCAACAATGGTACCACTCTT 60.505 45.833 19.09 4.86 0.00 2.85
1374 1381 2.803285 ATCCAGATTGGGCTCCTCTA 57.197 50.000 0.00 0.00 38.32 2.43
1421 1428 2.182614 GACCATGTCCGCCGTTGTTG 62.183 60.000 0.00 0.00 0.00 3.33
1450 1457 1.218875 TGAGCACGACGTCGCAAATT 61.219 50.000 35.92 18.00 44.43 1.82
1467 1474 2.514458 ATTGACCGGCCAAGAAGAAT 57.486 45.000 9.66 0.00 0.00 2.40
1472 1479 4.002797 GGCCAAGAAGAATGCCGT 57.997 55.556 0.00 0.00 33.59 5.68
1474 1481 1.425428 GCCAAGAAGAATGCCGTCG 59.575 57.895 0.00 0.00 0.00 5.12
1518 1525 0.107703 TCAGATTCGTCACATGGGCC 60.108 55.000 0.00 0.00 0.00 5.80
1525 1532 3.770040 TCACATGGGCCCGAGACG 61.770 66.667 19.37 9.00 0.00 4.18
1545 1555 5.654650 AGACGGAACTCTTGAGATCAACTAT 59.345 40.000 4.49 0.00 0.00 2.12
1600 1610 1.821136 GTTGCCTCCTTGCTAGCAATT 59.179 47.619 29.40 0.00 46.00 2.32
1613 1623 9.807649 CCTTGCTAGCAATTGATTTAACTAAAT 57.192 29.630 29.40 0.00 35.70 1.40
1697 1714 8.306680 TCTTAAACTCTCTAAAAATGTCGGTG 57.693 34.615 0.00 0.00 0.00 4.94
1762 1779 3.316029 TCCATGTTGTTGTGCTCTGAAAG 59.684 43.478 0.00 0.00 0.00 2.62
1776 1793 4.272018 GCTCTGAAAGCGATACACAATCAT 59.728 41.667 0.00 0.00 42.21 2.45
1806 1823 1.212935 AGCTTCGGGTTTGATATGCCT 59.787 47.619 0.00 0.00 0.00 4.75
1813 1830 4.097286 TCGGGTTTGATATGCCTTTTTAGC 59.903 41.667 0.00 0.00 0.00 3.09
1824 1841 6.603940 ATGCCTTTTTAGCCACATTTAGAA 57.396 33.333 0.00 0.00 0.00 2.10
1859 1876 9.860898 GTCCATTTAATTTCTAGAAGTTGCAAT 57.139 29.630 20.16 15.14 0.00 3.56
1904 1921 4.357918 ACCAACAACTCAGCTAACTCAT 57.642 40.909 0.00 0.00 0.00 2.90
1993 2014 5.818678 TTCACCTTACAAGTCACTATGGT 57.181 39.130 0.00 0.00 0.00 3.55
1997 2018 8.598202 TCACCTTACAAGTCACTATGGTTATA 57.402 34.615 0.00 0.00 0.00 0.98
2116 2137 2.558359 ACATTGGCAGAAGTTTAGCACC 59.442 45.455 3.39 0.00 0.00 5.01
2117 2138 1.234821 TTGGCAGAAGTTTAGCACCG 58.765 50.000 3.39 0.00 0.00 4.94
2118 2139 1.234615 TGGCAGAAGTTTAGCACCGC 61.235 55.000 3.39 0.00 0.00 5.68
2121 2142 1.705256 CAGAAGTTTAGCACCGCGTA 58.295 50.000 4.92 0.00 0.00 4.42
2125 2146 1.831343 AGTTTAGCACCGCGTATACG 58.169 50.000 20.87 20.87 43.27 3.06
2139 2160 3.881795 CGTATACGCGGTTCAAGTAGAT 58.118 45.455 13.08 0.00 0.00 1.98
2142 2163 0.739813 ACGCGGTTCAAGTAGATGGC 60.740 55.000 12.47 0.00 0.00 4.40
2152 2173 6.491403 GGTTCAAGTAGATGGCCAATGATATT 59.509 38.462 10.96 0.00 0.00 1.28
2161 2182 6.614906 AGATGGCCAATGATATTTTTACCCAA 59.385 34.615 10.96 0.00 0.00 4.12
2463 2484 2.584608 CCCACTCCACGCCTTAGG 59.415 66.667 0.00 0.00 0.00 2.69
2464 2485 2.125106 CCACTCCACGCCTTAGGC 60.125 66.667 14.22 14.22 46.75 3.93
2481 2502 7.778470 CCTTAGGCATTAACTTAGTCTTGAG 57.222 40.000 0.00 0.00 0.00 3.02
2482 2503 6.258947 CCTTAGGCATTAACTTAGTCTTGAGC 59.741 42.308 0.00 0.00 0.00 4.26
2483 2504 4.184629 AGGCATTAACTTAGTCTTGAGCG 58.815 43.478 0.00 0.00 0.00 5.03
2484 2505 4.081642 AGGCATTAACTTAGTCTTGAGCGA 60.082 41.667 0.00 0.00 0.00 4.93
2485 2506 4.033014 GGCATTAACTTAGTCTTGAGCGAC 59.967 45.833 0.00 0.00 0.00 5.19
2486 2507 4.865365 GCATTAACTTAGTCTTGAGCGACT 59.135 41.667 0.00 0.00 45.62 4.18
2487 2508 5.348997 GCATTAACTTAGTCTTGAGCGACTT 59.651 40.000 0.00 0.00 41.27 3.01
2488 2509 6.128526 GCATTAACTTAGTCTTGAGCGACTTT 60.129 38.462 0.00 0.00 41.27 2.66
2489 2510 7.063074 GCATTAACTTAGTCTTGAGCGACTTTA 59.937 37.037 0.00 0.00 41.27 1.85
2490 2511 9.088512 CATTAACTTAGTCTTGAGCGACTTTAT 57.911 33.333 0.00 0.00 41.27 1.40
2494 2515 9.654663 AACTTAGTCTTGAGCGACTTTATATTT 57.345 29.630 0.00 0.00 41.27 1.40
2495 2516 9.654663 ACTTAGTCTTGAGCGACTTTATATTTT 57.345 29.630 0.00 0.00 41.27 1.82
2496 2517 9.907576 CTTAGTCTTGAGCGACTTTATATTTTG 57.092 33.333 0.00 0.00 41.27 2.44
2497 2518 6.776094 AGTCTTGAGCGACTTTATATTTTGC 58.224 36.000 0.00 0.00 41.27 3.68
2498 2519 5.965918 GTCTTGAGCGACTTTATATTTTGCC 59.034 40.000 0.00 0.00 0.00 4.52
2499 2520 4.530094 TGAGCGACTTTATATTTTGCCG 57.470 40.909 0.00 0.00 0.00 5.69
2500 2521 3.242608 TGAGCGACTTTATATTTTGCCGC 60.243 43.478 0.00 0.00 41.43 6.53
2501 2522 2.680841 AGCGACTTTATATTTTGCCGCA 59.319 40.909 0.00 0.00 43.24 5.69
2502 2523 3.315191 AGCGACTTTATATTTTGCCGCAT 59.685 39.130 0.00 0.00 43.24 4.73
2503 2524 4.041723 GCGACTTTATATTTTGCCGCATT 58.958 39.130 0.00 0.00 40.88 3.56
2504 2525 4.502645 GCGACTTTATATTTTGCCGCATTT 59.497 37.500 0.00 0.00 40.88 2.32
2505 2526 5.005299 GCGACTTTATATTTTGCCGCATTTT 59.995 36.000 0.00 0.00 40.88 1.82
2506 2527 6.454981 GCGACTTTATATTTTGCCGCATTTTT 60.455 34.615 0.00 0.00 40.88 1.94
2507 2528 7.110511 CGACTTTATATTTTGCCGCATTTTTC 58.889 34.615 0.00 0.00 0.00 2.29
2508 2529 7.201393 CGACTTTATATTTTGCCGCATTTTTCA 60.201 33.333 0.00 0.00 0.00 2.69
2509 2530 7.962917 ACTTTATATTTTGCCGCATTTTTCAG 58.037 30.769 0.00 0.00 0.00 3.02
2510 2531 7.816995 ACTTTATATTTTGCCGCATTTTTCAGA 59.183 29.630 0.00 0.00 0.00 3.27
2511 2532 8.539770 TTTATATTTTGCCGCATTTTTCAGAA 57.460 26.923 0.00 0.00 0.00 3.02
2512 2533 8.715191 TTATATTTTGCCGCATTTTTCAGAAT 57.285 26.923 0.00 0.00 0.00 2.40
2513 2534 4.728917 TTTTGCCGCATTTTTCAGAATG 57.271 36.364 0.00 0.00 39.47 2.67
2514 2535 3.383620 TTGCCGCATTTTTCAGAATGT 57.616 38.095 0.00 0.00 38.86 2.71
2515 2536 2.674954 TGCCGCATTTTTCAGAATGTG 58.325 42.857 0.00 4.62 43.63 3.21
2516 2537 1.391144 GCCGCATTTTTCAGAATGTGC 59.609 47.619 5.81 5.33 43.01 4.57
2521 2542 5.520022 GCATTTTTCAGAATGTGCGATTT 57.480 34.783 0.00 0.00 38.86 2.17
2522 2543 5.919196 GCATTTTTCAGAATGTGCGATTTT 58.081 33.333 0.00 0.00 38.86 1.82
2523 2544 6.365050 GCATTTTTCAGAATGTGCGATTTTT 58.635 32.000 0.00 0.00 38.86 1.94
2544 2565 7.473735 TTTTTGGTTATGTGCATCCTAATCA 57.526 32.000 0.00 0.00 0.00 2.57
2545 2566 7.658525 TTTTGGTTATGTGCATCCTAATCAT 57.341 32.000 0.00 0.00 0.00 2.45
2546 2567 8.759481 TTTTGGTTATGTGCATCCTAATCATA 57.241 30.769 0.00 0.00 0.00 2.15
2547 2568 7.744087 TTGGTTATGTGCATCCTAATCATAC 57.256 36.000 0.00 0.00 0.00 2.39
2548 2569 6.836242 TGGTTATGTGCATCCTAATCATACA 58.164 36.000 0.00 0.00 0.00 2.29
2549 2570 6.936335 TGGTTATGTGCATCCTAATCATACAG 59.064 38.462 0.00 0.00 0.00 2.74
2550 2571 7.161404 GGTTATGTGCATCCTAATCATACAGA 58.839 38.462 0.00 0.00 0.00 3.41
2551 2572 7.332926 GGTTATGTGCATCCTAATCATACAGAG 59.667 40.741 0.00 0.00 0.00 3.35
2552 2573 5.876651 TGTGCATCCTAATCATACAGAGT 57.123 39.130 0.00 0.00 0.00 3.24
2553 2574 5.847304 TGTGCATCCTAATCATACAGAGTC 58.153 41.667 0.00 0.00 0.00 3.36
2554 2575 5.221521 TGTGCATCCTAATCATACAGAGTCC 60.222 44.000 0.00 0.00 0.00 3.85
2555 2576 4.021981 TGCATCCTAATCATACAGAGTCCG 60.022 45.833 0.00 0.00 0.00 4.79
2556 2577 4.619394 GCATCCTAATCATACAGAGTCCGG 60.619 50.000 0.00 0.00 0.00 5.14
2557 2578 4.448720 TCCTAATCATACAGAGTCCGGA 57.551 45.455 0.00 0.00 0.00 5.14
2558 2579 4.999310 TCCTAATCATACAGAGTCCGGAT 58.001 43.478 7.81 0.00 0.00 4.18
2559 2580 4.767409 TCCTAATCATACAGAGTCCGGATG 59.233 45.833 7.81 4.33 0.00 3.51
2560 2581 4.524714 CCTAATCATACAGAGTCCGGATGT 59.475 45.833 7.81 11.33 0.00 3.06
2561 2582 5.710567 CCTAATCATACAGAGTCCGGATGTA 59.289 44.000 16.63 16.63 34.17 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.556911 GGGAGGCTGAGATTCAACTCA 59.443 52.381 0.00 0.00 43.39 3.41
3 4 1.836802 AGGGAGGCTGAGATTCAACTC 59.163 52.381 0.00 0.00 37.42 3.01
4 5 1.963985 AGGGAGGCTGAGATTCAACT 58.036 50.000 0.00 0.00 0.00 3.16
5 6 3.536570 GTTAGGGAGGCTGAGATTCAAC 58.463 50.000 0.00 0.00 0.00 3.18
6 7 2.505819 GGTTAGGGAGGCTGAGATTCAA 59.494 50.000 0.00 0.00 0.00 2.69
7 8 2.119495 GGTTAGGGAGGCTGAGATTCA 58.881 52.381 0.00 0.00 0.00 2.57
8 9 2.103941 CTGGTTAGGGAGGCTGAGATTC 59.896 54.545 0.00 0.00 0.00 2.52
9 10 2.122768 CTGGTTAGGGAGGCTGAGATT 58.877 52.381 0.00 0.00 0.00 2.40
10 11 1.292242 TCTGGTTAGGGAGGCTGAGAT 59.708 52.381 0.00 0.00 0.00 2.75
11 12 0.710588 TCTGGTTAGGGAGGCTGAGA 59.289 55.000 0.00 0.00 0.00 3.27
12 13 0.827368 GTCTGGTTAGGGAGGCTGAG 59.173 60.000 0.00 0.00 0.00 3.35
13 14 0.970937 CGTCTGGTTAGGGAGGCTGA 60.971 60.000 0.00 0.00 0.00 4.26
14 15 1.258445 ACGTCTGGTTAGGGAGGCTG 61.258 60.000 0.00 0.00 0.00 4.85
15 16 0.333993 TACGTCTGGTTAGGGAGGCT 59.666 55.000 0.00 0.00 0.00 4.58
16 17 0.459078 GTACGTCTGGTTAGGGAGGC 59.541 60.000 0.00 0.00 0.00 4.70
17 18 1.749634 CTGTACGTCTGGTTAGGGAGG 59.250 57.143 0.00 0.00 0.00 4.30
18 19 2.444421 ACTGTACGTCTGGTTAGGGAG 58.556 52.381 0.00 0.00 0.00 4.30
19 20 2.559668 CAACTGTACGTCTGGTTAGGGA 59.440 50.000 0.00 0.00 0.00 4.20
20 21 2.298163 ACAACTGTACGTCTGGTTAGGG 59.702 50.000 0.00 0.00 0.00 3.53
21 22 3.005050 TGACAACTGTACGTCTGGTTAGG 59.995 47.826 0.00 0.00 33.18 2.69
22 23 3.979495 GTGACAACTGTACGTCTGGTTAG 59.021 47.826 0.00 0.00 33.18 2.34
23 24 3.380954 TGTGACAACTGTACGTCTGGTTA 59.619 43.478 0.00 0.00 33.18 2.85
24 25 2.166870 TGTGACAACTGTACGTCTGGTT 59.833 45.455 0.00 0.00 33.18 3.67
25 26 1.752498 TGTGACAACTGTACGTCTGGT 59.248 47.619 0.00 0.00 33.18 4.00
26 27 2.394708 CTGTGACAACTGTACGTCTGG 58.605 52.381 0.00 0.00 33.18 3.86
27 28 1.787155 GCTGTGACAACTGTACGTCTG 59.213 52.381 0.00 0.00 33.18 3.51
28 29 1.407618 TGCTGTGACAACTGTACGTCT 59.592 47.619 0.00 0.00 33.18 4.18
29 30 1.847818 TGCTGTGACAACTGTACGTC 58.152 50.000 0.00 3.93 0.00 4.34
30 31 1.931172 GTTGCTGTGACAACTGTACGT 59.069 47.619 0.00 0.00 45.20 3.57
31 32 2.645628 GTTGCTGTGACAACTGTACG 57.354 50.000 0.31 0.00 45.20 3.67
38 39 2.016318 CAGTTCCAGTTGCTGTGACAA 58.984 47.619 0.00 0.00 0.00 3.18
39 40 1.667236 CAGTTCCAGTTGCTGTGACA 58.333 50.000 0.00 0.00 0.00 3.58
40 41 0.947244 CCAGTTCCAGTTGCTGTGAC 59.053 55.000 0.00 0.00 0.00 3.67
41 42 0.546122 ACCAGTTCCAGTTGCTGTGA 59.454 50.000 0.00 0.00 0.00 3.58
42 43 0.947244 GACCAGTTCCAGTTGCTGTG 59.053 55.000 0.00 0.00 0.00 3.66
43 44 0.546122 TGACCAGTTCCAGTTGCTGT 59.454 50.000 0.00 0.00 0.00 4.40
44 45 1.679139 TTGACCAGTTCCAGTTGCTG 58.321 50.000 0.00 0.00 0.00 4.41
45 46 2.024414 GTTTGACCAGTTCCAGTTGCT 58.976 47.619 0.00 0.00 0.00 3.91
46 47 1.748493 TGTTTGACCAGTTCCAGTTGC 59.252 47.619 0.00 0.00 0.00 4.17
47 48 4.173256 GTTTGTTTGACCAGTTCCAGTTG 58.827 43.478 0.00 0.00 0.00 3.16
48 49 3.194755 GGTTTGTTTGACCAGTTCCAGTT 59.805 43.478 0.00 0.00 37.14 3.16
49 50 2.758423 GGTTTGTTTGACCAGTTCCAGT 59.242 45.455 0.00 0.00 37.14 4.00
50 51 3.023832 AGGTTTGTTTGACCAGTTCCAG 58.976 45.455 0.00 0.00 39.71 3.86
51 52 3.020984 GAGGTTTGTTTGACCAGTTCCA 58.979 45.455 0.00 0.00 39.71 3.53
52 53 3.066760 CAGAGGTTTGTTTGACCAGTTCC 59.933 47.826 0.00 0.00 39.71 3.62
53 54 3.694566 ACAGAGGTTTGTTTGACCAGTTC 59.305 43.478 0.00 0.00 39.71 3.01
54 55 3.694566 GACAGAGGTTTGTTTGACCAGTT 59.305 43.478 0.00 0.00 39.71 3.16
55 56 3.279434 GACAGAGGTTTGTTTGACCAGT 58.721 45.455 0.00 0.00 39.71 4.00
56 57 2.618709 GGACAGAGGTTTGTTTGACCAG 59.381 50.000 0.00 0.00 39.71 4.00
57 58 2.241176 AGGACAGAGGTTTGTTTGACCA 59.759 45.455 0.00 0.00 39.71 4.02
58 59 2.879026 GAGGACAGAGGTTTGTTTGACC 59.121 50.000 0.00 0.00 37.44 4.02
59 60 2.879026 GGAGGACAGAGGTTTGTTTGAC 59.121 50.000 0.00 0.00 0.00 3.18
60 61 2.158667 GGGAGGACAGAGGTTTGTTTGA 60.159 50.000 0.00 0.00 0.00 2.69
61 62 2.230660 GGGAGGACAGAGGTTTGTTTG 58.769 52.381 0.00 0.00 0.00 2.93
62 63 1.145119 GGGGAGGACAGAGGTTTGTTT 59.855 52.381 0.00 0.00 0.00 2.83
63 64 0.771755 GGGGAGGACAGAGGTTTGTT 59.228 55.000 0.00 0.00 0.00 2.83
64 65 0.401395 TGGGGAGGACAGAGGTTTGT 60.401 55.000 0.00 0.00 0.00 2.83
65 66 0.771127 TTGGGGAGGACAGAGGTTTG 59.229 55.000 0.00 0.00 0.00 2.93
66 67 1.068121 CTTGGGGAGGACAGAGGTTT 58.932 55.000 0.00 0.00 0.00 3.27
67 68 1.492993 GCTTGGGGAGGACAGAGGTT 61.493 60.000 0.00 0.00 0.00 3.50
68 69 1.920835 GCTTGGGGAGGACAGAGGT 60.921 63.158 0.00 0.00 0.00 3.85
69 70 0.325671 TAGCTTGGGGAGGACAGAGG 60.326 60.000 0.00 0.00 0.00 3.69
70 71 0.827368 GTAGCTTGGGGAGGACAGAG 59.173 60.000 0.00 0.00 0.00 3.35
71 72 0.413832 AGTAGCTTGGGGAGGACAGA 59.586 55.000 0.00 0.00 0.00 3.41
72 73 0.539051 CAGTAGCTTGGGGAGGACAG 59.461 60.000 0.00 0.00 0.00 3.51
73 74 0.909610 CCAGTAGCTTGGGGAGGACA 60.910 60.000 0.00 0.00 34.46 4.02
74 75 0.910088 ACCAGTAGCTTGGGGAGGAC 60.910 60.000 9.27 0.00 42.76 3.85
75 76 0.178873 AACCAGTAGCTTGGGGAGGA 60.179 55.000 9.27 0.00 42.76 3.71
76 77 0.253327 GAACCAGTAGCTTGGGGAGG 59.747 60.000 9.27 0.00 42.76 4.30
77 78 1.280457 AGAACCAGTAGCTTGGGGAG 58.720 55.000 9.27 0.00 42.76 4.30
78 79 2.634639 TAGAACCAGTAGCTTGGGGA 57.365 50.000 9.27 0.00 42.76 4.81
79 80 3.041946 AGATAGAACCAGTAGCTTGGGG 58.958 50.000 9.27 2.76 42.76 4.96
80 81 5.540337 TGATAGATAGAACCAGTAGCTTGGG 59.460 44.000 9.27 3.12 42.76 4.12
81 82 6.266558 AGTGATAGATAGAACCAGTAGCTTGG 59.733 42.308 2.71 2.71 44.09 3.61
82 83 7.283625 AGTGATAGATAGAACCAGTAGCTTG 57.716 40.000 0.00 0.00 0.00 4.01
83 84 7.014808 GGAAGTGATAGATAGAACCAGTAGCTT 59.985 40.741 0.00 0.00 0.00 3.74
84 85 6.492087 GGAAGTGATAGATAGAACCAGTAGCT 59.508 42.308 0.00 0.00 0.00 3.32
85 86 6.294843 GGGAAGTGATAGATAGAACCAGTAGC 60.295 46.154 0.00 0.00 0.00 3.58
86 87 7.007723 AGGGAAGTGATAGATAGAACCAGTAG 58.992 42.308 0.00 0.00 0.00 2.57
87 88 6.923670 AGGGAAGTGATAGATAGAACCAGTA 58.076 40.000 0.00 0.00 0.00 2.74
88 89 5.782925 AGGGAAGTGATAGATAGAACCAGT 58.217 41.667 0.00 0.00 0.00 4.00
89 90 6.739331 AAGGGAAGTGATAGATAGAACCAG 57.261 41.667 0.00 0.00 0.00 4.00
90 91 7.844779 AGTAAAGGGAAGTGATAGATAGAACCA 59.155 37.037 0.00 0.00 0.00 3.67
91 92 8.252624 AGTAAAGGGAAGTGATAGATAGAACC 57.747 38.462 0.00 0.00 0.00 3.62
94 95 9.931698 TGTAAGTAAAGGGAAGTGATAGATAGA 57.068 33.333 0.00 0.00 0.00 1.98
111 112 9.754382 ACTTCACGAAGATAAACTGTAAGTAAA 57.246 29.630 13.60 0.00 43.89 2.01
112 113 9.403110 GACTTCACGAAGATAAACTGTAAGTAA 57.597 33.333 13.60 0.00 43.89 2.24
113 114 8.570488 TGACTTCACGAAGATAAACTGTAAGTA 58.430 33.333 13.60 0.00 43.89 2.24
114 115 7.431249 TGACTTCACGAAGATAAACTGTAAGT 58.569 34.615 13.60 0.00 45.72 2.24
115 116 7.869016 TGACTTCACGAAGATAAACTGTAAG 57.131 36.000 13.60 0.00 40.79 2.34
116 117 8.708742 CAATGACTTCACGAAGATAAACTGTAA 58.291 33.333 13.60 0.00 40.79 2.41
117 118 7.148639 GCAATGACTTCACGAAGATAAACTGTA 60.149 37.037 13.60 0.00 40.79 2.74
118 119 6.347725 GCAATGACTTCACGAAGATAAACTGT 60.348 38.462 13.60 0.00 40.79 3.55
119 120 6.017933 GCAATGACTTCACGAAGATAAACTG 58.982 40.000 13.60 4.50 40.79 3.16
120 121 5.122396 GGCAATGACTTCACGAAGATAAACT 59.878 40.000 13.60 0.00 40.79 2.66
121 122 5.122396 AGGCAATGACTTCACGAAGATAAAC 59.878 40.000 13.60 0.00 40.79 2.01
122 123 5.122239 CAGGCAATGACTTCACGAAGATAAA 59.878 40.000 13.60 0.00 40.79 1.40
123 124 4.631377 CAGGCAATGACTTCACGAAGATAA 59.369 41.667 13.60 0.00 40.79 1.75
124 125 4.183865 CAGGCAATGACTTCACGAAGATA 58.816 43.478 13.60 2.54 40.79 1.98
125 126 3.005554 CAGGCAATGACTTCACGAAGAT 58.994 45.455 13.60 0.00 40.79 2.40
126 127 2.416747 CAGGCAATGACTTCACGAAGA 58.583 47.619 13.60 0.00 40.79 2.87
127 128 1.135859 GCAGGCAATGACTTCACGAAG 60.136 52.381 5.24 5.24 43.79 3.79
128 129 0.874390 GCAGGCAATGACTTCACGAA 59.126 50.000 0.00 0.00 0.00 3.85
129 130 0.250252 TGCAGGCAATGACTTCACGA 60.250 50.000 0.00 0.00 0.00 4.35
130 131 0.806868 ATGCAGGCAATGACTTCACG 59.193 50.000 0.00 0.00 0.00 4.35
131 132 1.734707 GCATGCAGGCAATGACTTCAC 60.735 52.381 20.11 0.00 0.00 3.18
132 133 0.528924 GCATGCAGGCAATGACTTCA 59.471 50.000 20.11 0.00 0.00 3.02
133 134 0.528924 TGCATGCAGGCAATGACTTC 59.471 50.000 25.72 0.00 41.65 3.01
134 135 2.661054 TGCATGCAGGCAATGACTT 58.339 47.368 25.72 0.00 41.65 3.01
135 136 4.426971 TGCATGCAGGCAATGACT 57.573 50.000 25.72 0.00 41.65 3.41
142 143 3.120792 CAAACAGATAATGCATGCAGGC 58.879 45.455 26.69 18.05 0.00 4.85
143 144 4.097437 AGTCAAACAGATAATGCATGCAGG 59.903 41.667 26.69 12.66 0.00 4.85
144 145 5.244785 AGTCAAACAGATAATGCATGCAG 57.755 39.130 26.69 13.49 0.00 4.41
145 146 5.183522 TGAAGTCAAACAGATAATGCATGCA 59.816 36.000 25.04 25.04 0.00 3.96
146 147 5.514204 GTGAAGTCAAACAGATAATGCATGC 59.486 40.000 11.82 11.82 0.00 4.06
147 148 6.745907 CAGTGAAGTCAAACAGATAATGCATG 59.254 38.462 0.00 0.00 0.00 4.06
148 149 6.624423 GCAGTGAAGTCAAACAGATAATGCAT 60.624 38.462 0.00 0.00 0.00 3.96
149 150 5.335113 GCAGTGAAGTCAAACAGATAATGCA 60.335 40.000 0.00 0.00 0.00 3.96
150 151 5.091431 GCAGTGAAGTCAAACAGATAATGC 58.909 41.667 0.00 0.00 0.00 3.56
151 152 6.245115 TGCAGTGAAGTCAAACAGATAATG 57.755 37.500 0.00 0.00 0.00 1.90
152 153 6.656270 TCATGCAGTGAAGTCAAACAGATAAT 59.344 34.615 0.00 0.00 32.78 1.28
153 154 5.997129 TCATGCAGTGAAGTCAAACAGATAA 59.003 36.000 0.00 0.00 32.78 1.75
154 155 5.409520 GTCATGCAGTGAAGTCAAACAGATA 59.590 40.000 0.00 0.00 38.90 1.98
155 156 4.214971 GTCATGCAGTGAAGTCAAACAGAT 59.785 41.667 0.00 0.00 38.90 2.90
156 157 3.561310 GTCATGCAGTGAAGTCAAACAGA 59.439 43.478 0.00 0.00 38.90 3.41
157 158 3.562973 AGTCATGCAGTGAAGTCAAACAG 59.437 43.478 0.00 0.00 38.90 3.16
158 159 3.544684 AGTCATGCAGTGAAGTCAAACA 58.455 40.909 0.00 0.00 38.90 2.83
159 160 4.752101 AGTAGTCATGCAGTGAAGTCAAAC 59.248 41.667 0.00 0.00 38.90 2.93
160 161 4.960938 AGTAGTCATGCAGTGAAGTCAAA 58.039 39.130 0.00 0.00 38.90 2.69
161 162 4.607293 AGTAGTCATGCAGTGAAGTCAA 57.393 40.909 0.00 0.00 38.90 3.18
162 163 4.202253 ACAAGTAGTCATGCAGTGAAGTCA 60.202 41.667 0.00 0.00 38.90 3.41
163 164 4.310769 ACAAGTAGTCATGCAGTGAAGTC 58.689 43.478 0.00 0.00 38.90 3.01
164 165 4.342862 ACAAGTAGTCATGCAGTGAAGT 57.657 40.909 0.00 0.00 38.90 3.01
165 166 4.993584 AGAACAAGTAGTCATGCAGTGAAG 59.006 41.667 0.00 0.00 38.90 3.02
166 167 4.751600 CAGAACAAGTAGTCATGCAGTGAA 59.248 41.667 0.00 0.00 38.90 3.18
167 168 4.039124 TCAGAACAAGTAGTCATGCAGTGA 59.961 41.667 0.00 0.00 0.00 3.41
168 169 4.309933 TCAGAACAAGTAGTCATGCAGTG 58.690 43.478 0.00 0.00 0.00 3.66
169 170 4.607293 TCAGAACAAGTAGTCATGCAGT 57.393 40.909 0.00 0.00 0.00 4.40
170 171 5.163784 CCAATCAGAACAAGTAGTCATGCAG 60.164 44.000 0.00 0.00 0.00 4.41
171 172 4.696877 CCAATCAGAACAAGTAGTCATGCA 59.303 41.667 0.00 0.00 0.00 3.96
172 173 4.437930 GCCAATCAGAACAAGTAGTCATGC 60.438 45.833 0.00 0.00 0.00 4.06
173 174 4.940046 AGCCAATCAGAACAAGTAGTCATG 59.060 41.667 0.00 0.00 0.00 3.07
174 175 5.171339 AGCCAATCAGAACAAGTAGTCAT 57.829 39.130 0.00 0.00 0.00 3.06
175 176 4.623932 AGCCAATCAGAACAAGTAGTCA 57.376 40.909 0.00 0.00 0.00 3.41
176 177 4.997395 TGAAGCCAATCAGAACAAGTAGTC 59.003 41.667 0.00 0.00 0.00 2.59
177 178 4.973168 TGAAGCCAATCAGAACAAGTAGT 58.027 39.130 0.00 0.00 0.00 2.73
178 179 6.820656 AGTATGAAGCCAATCAGAACAAGTAG 59.179 38.462 0.00 0.00 31.76 2.57
179 180 6.711277 AGTATGAAGCCAATCAGAACAAGTA 58.289 36.000 0.00 0.00 31.76 2.24
180 181 5.564550 AGTATGAAGCCAATCAGAACAAGT 58.435 37.500 0.00 0.00 31.76 3.16
181 182 7.714377 AGATAGTATGAAGCCAATCAGAACAAG 59.286 37.037 0.00 0.00 31.76 3.16
182 183 7.568349 AGATAGTATGAAGCCAATCAGAACAA 58.432 34.615 0.00 0.00 31.76 2.83
183 184 7.129457 AGATAGTATGAAGCCAATCAGAACA 57.871 36.000 0.00 0.00 31.76 3.18
184 185 7.172361 GGAAGATAGTATGAAGCCAATCAGAAC 59.828 40.741 0.00 0.00 31.76 3.01
185 186 7.147497 TGGAAGATAGTATGAAGCCAATCAGAA 60.147 37.037 0.00 0.00 31.76 3.02
186 187 6.327365 TGGAAGATAGTATGAAGCCAATCAGA 59.673 38.462 0.00 0.00 31.76 3.27
187 188 6.528321 TGGAAGATAGTATGAAGCCAATCAG 58.472 40.000 0.00 0.00 31.76 2.90
188 189 6.499106 TGGAAGATAGTATGAAGCCAATCA 57.501 37.500 0.00 0.00 0.00 2.57
189 190 6.597280 GGATGGAAGATAGTATGAAGCCAATC 59.403 42.308 0.00 0.00 0.00 2.67
190 191 6.274200 AGGATGGAAGATAGTATGAAGCCAAT 59.726 38.462 0.00 0.00 0.00 3.16
191 192 5.608437 AGGATGGAAGATAGTATGAAGCCAA 59.392 40.000 0.00 0.00 0.00 4.52
192 193 5.012458 CAGGATGGAAGATAGTATGAAGCCA 59.988 44.000 0.00 0.00 0.00 4.75
193 194 5.247110 TCAGGATGGAAGATAGTATGAAGCC 59.753 44.000 0.00 0.00 36.16 4.35
194 195 6.352016 TCAGGATGGAAGATAGTATGAAGC 57.648 41.667 0.00 0.00 36.16 3.86
195 196 7.399765 AGGATCAGGATGGAAGATAGTATGAAG 59.600 40.741 0.00 0.00 36.16 3.02
196 197 7.251936 AGGATCAGGATGGAAGATAGTATGAA 58.748 38.462 0.00 0.00 36.16 2.57
197 198 6.809428 AGGATCAGGATGGAAGATAGTATGA 58.191 40.000 0.00 0.00 36.16 2.15
198 199 7.493499 AAGGATCAGGATGGAAGATAGTATG 57.507 40.000 0.00 0.00 36.16 2.39
199 200 8.405850 AGTAAGGATCAGGATGGAAGATAGTAT 58.594 37.037 0.00 0.00 36.16 2.12
200 201 7.770662 AGTAAGGATCAGGATGGAAGATAGTA 58.229 38.462 0.00 0.00 36.16 1.82
201 202 6.629156 AGTAAGGATCAGGATGGAAGATAGT 58.371 40.000 0.00 0.00 36.16 2.12
202 203 8.837099 ATAGTAAGGATCAGGATGGAAGATAG 57.163 38.462 0.00 0.00 36.16 2.08
203 204 8.628281 AGATAGTAAGGATCAGGATGGAAGATA 58.372 37.037 0.00 0.00 36.16 1.98
204 205 7.486473 AGATAGTAAGGATCAGGATGGAAGAT 58.514 38.462 0.00 0.00 36.16 2.40
205 206 6.868826 AGATAGTAAGGATCAGGATGGAAGA 58.131 40.000 0.00 0.00 36.16 2.87
206 207 7.147915 GCTAGATAGTAAGGATCAGGATGGAAG 60.148 44.444 0.00 0.00 36.16 3.46
207 208 6.665680 GCTAGATAGTAAGGATCAGGATGGAA 59.334 42.308 0.00 0.00 36.16 3.53
208 209 6.011185 AGCTAGATAGTAAGGATCAGGATGGA 60.011 42.308 0.00 0.00 36.16 3.41
209 210 6.096705 CAGCTAGATAGTAAGGATCAGGATGG 59.903 46.154 0.00 0.00 36.16 3.51
210 211 6.405731 GCAGCTAGATAGTAAGGATCAGGATG 60.406 46.154 0.00 0.00 37.54 3.51
211 212 5.656416 GCAGCTAGATAGTAAGGATCAGGAT 59.344 44.000 0.00 0.00 0.00 3.24
212 213 5.013547 GCAGCTAGATAGTAAGGATCAGGA 58.986 45.833 0.00 0.00 0.00 3.86
213 214 5.016173 AGCAGCTAGATAGTAAGGATCAGG 58.984 45.833 0.00 0.00 0.00 3.86
214 215 7.695480 TTAGCAGCTAGATAGTAAGGATCAG 57.305 40.000 1.49 0.00 0.00 2.90
215 216 9.402320 CTATTAGCAGCTAGATAGTAAGGATCA 57.598 37.037 16.19 0.00 0.00 2.92
216 217 9.403583 ACTATTAGCAGCTAGATAGTAAGGATC 57.596 37.037 22.72 0.00 34.49 3.36
217 218 9.403583 GACTATTAGCAGCTAGATAGTAAGGAT 57.596 37.037 23.40 8.39 35.93 3.24
218 219 8.607713 AGACTATTAGCAGCTAGATAGTAAGGA 58.392 37.037 23.40 2.68 35.93 3.36
219 220 8.801882 AGACTATTAGCAGCTAGATAGTAAGG 57.198 38.462 23.40 9.58 35.93 2.69
223 224 9.226606 CACTAAGACTATTAGCAGCTAGATAGT 57.773 37.037 23.49 23.49 37.86 2.12
224 225 8.181573 GCACTAAGACTATTAGCAGCTAGATAG 58.818 40.741 19.70 19.70 0.00 2.08
225 226 7.885922 AGCACTAAGACTATTAGCAGCTAGATA 59.114 37.037 1.49 3.73 35.97 1.98
226 227 6.719370 AGCACTAAGACTATTAGCAGCTAGAT 59.281 38.462 1.49 2.76 35.97 1.98
227 228 6.065374 AGCACTAAGACTATTAGCAGCTAGA 58.935 40.000 1.49 0.00 35.97 2.43
228 229 6.325919 AGCACTAAGACTATTAGCAGCTAG 57.674 41.667 1.49 0.00 35.97 3.42
229 230 6.716934 AAGCACTAAGACTATTAGCAGCTA 57.283 37.500 0.00 0.00 36.39 3.32
230 231 5.606348 AAGCACTAAGACTATTAGCAGCT 57.394 39.130 0.00 0.00 37.89 4.24
231 232 5.812642 TGAAAGCACTAAGACTATTAGCAGC 59.187 40.000 0.00 5.15 0.00 5.25
232 233 7.227992 GTGAAAGCACTAAGACTATTAGCAG 57.772 40.000 0.00 0.00 41.84 4.24
247 248 7.324616 GTCAAGTATTCAATGAAGTGAAAGCAC 59.675 37.037 1.10 0.00 45.49 4.40
248 249 7.229306 AGTCAAGTATTCAATGAAGTGAAAGCA 59.771 33.333 1.10 0.00 40.76 3.91
249 250 7.588512 AGTCAAGTATTCAATGAAGTGAAAGC 58.411 34.615 1.10 0.00 40.76 3.51
252 253 9.166173 CCATAGTCAAGTATTCAATGAAGTGAA 57.834 33.333 1.10 0.00 41.59 3.18
253 254 7.280876 GCCATAGTCAAGTATTCAATGAAGTGA 59.719 37.037 1.10 0.17 0.00 3.41
254 255 7.281774 AGCCATAGTCAAGTATTCAATGAAGTG 59.718 37.037 1.10 0.00 0.00 3.16
255 256 7.341805 AGCCATAGTCAAGTATTCAATGAAGT 58.658 34.615 1.10 0.00 0.00 3.01
256 257 7.798596 AGCCATAGTCAAGTATTCAATGAAG 57.201 36.000 1.10 0.00 0.00 3.02
257 258 7.415541 GCAAGCCATAGTCAAGTATTCAATGAA 60.416 37.037 0.00 0.00 0.00 2.57
258 259 6.038603 GCAAGCCATAGTCAAGTATTCAATGA 59.961 38.462 0.00 0.00 0.00 2.57
259 260 6.204359 GCAAGCCATAGTCAAGTATTCAATG 58.796 40.000 0.00 0.00 0.00 2.82
260 261 5.300286 GGCAAGCCATAGTCAAGTATTCAAT 59.700 40.000 6.14 0.00 35.81 2.57
261 262 4.640201 GGCAAGCCATAGTCAAGTATTCAA 59.360 41.667 6.14 0.00 35.81 2.69
262 263 4.080356 AGGCAAGCCATAGTCAAGTATTCA 60.080 41.667 14.40 0.00 38.92 2.57
263 264 4.455606 AGGCAAGCCATAGTCAAGTATTC 58.544 43.478 14.40 0.00 38.92 1.75
264 265 4.510167 AGGCAAGCCATAGTCAAGTATT 57.490 40.909 14.40 0.00 38.92 1.89
265 266 4.656112 ACTAGGCAAGCCATAGTCAAGTAT 59.344 41.667 14.40 0.00 38.92 2.12
266 267 4.030913 ACTAGGCAAGCCATAGTCAAGTA 58.969 43.478 14.40 0.00 38.92 2.24
267 268 2.840651 ACTAGGCAAGCCATAGTCAAGT 59.159 45.455 14.40 2.34 38.92 3.16
268 269 3.201290 CACTAGGCAAGCCATAGTCAAG 58.799 50.000 14.40 3.75 38.92 3.02
269 270 2.571653 ACACTAGGCAAGCCATAGTCAA 59.428 45.455 14.40 0.00 38.92 3.18
270 271 2.187958 ACACTAGGCAAGCCATAGTCA 58.812 47.619 14.40 0.00 38.92 3.41
271 272 2.990066 ACACTAGGCAAGCCATAGTC 57.010 50.000 14.40 0.00 38.92 2.59
272 273 3.375699 ACTACACTAGGCAAGCCATAGT 58.624 45.455 14.40 14.01 38.92 2.12
273 274 3.639094 AGACTACACTAGGCAAGCCATAG 59.361 47.826 14.40 13.43 35.81 2.23
274 275 3.643237 AGACTACACTAGGCAAGCCATA 58.357 45.455 14.40 2.34 35.81 2.74
275 276 2.472029 AGACTACACTAGGCAAGCCAT 58.528 47.619 14.40 1.19 35.81 4.40
276 277 1.938585 AGACTACACTAGGCAAGCCA 58.061 50.000 14.40 0.00 35.81 4.75
277 278 2.101082 GGTAGACTACACTAGGCAAGCC 59.899 54.545 14.48 2.02 35.81 4.35
278 279 3.025262 AGGTAGACTACACTAGGCAAGC 58.975 50.000 14.48 0.00 35.81 4.01
279 280 4.951094 AGAAGGTAGACTACACTAGGCAAG 59.049 45.833 14.48 0.00 35.81 4.01
280 281 4.705507 CAGAAGGTAGACTACACTAGGCAA 59.294 45.833 14.48 0.00 35.81 4.52
281 282 4.270834 CAGAAGGTAGACTACACTAGGCA 58.729 47.826 14.48 0.00 35.81 4.75
282 283 3.067040 GCAGAAGGTAGACTACACTAGGC 59.933 52.174 14.48 8.19 0.00 3.93
283 284 4.336993 CAGCAGAAGGTAGACTACACTAGG 59.663 50.000 14.48 2.37 0.00 3.02
284 285 4.201970 GCAGCAGAAGGTAGACTACACTAG 60.202 50.000 14.48 0.00 0.00 2.57
285 286 3.695060 GCAGCAGAAGGTAGACTACACTA 59.305 47.826 14.48 0.00 0.00 2.74
286 287 2.494073 GCAGCAGAAGGTAGACTACACT 59.506 50.000 14.48 6.41 0.00 3.55
287 288 2.231478 TGCAGCAGAAGGTAGACTACAC 59.769 50.000 14.48 4.28 0.00 2.90
288 289 2.525368 TGCAGCAGAAGGTAGACTACA 58.475 47.619 14.48 0.00 0.00 2.74
289 290 3.810310 ATGCAGCAGAAGGTAGACTAC 57.190 47.619 0.00 3.86 0.00 2.73
290 291 5.140454 TCATATGCAGCAGAAGGTAGACTA 58.860 41.667 0.00 0.00 0.00 2.59
291 292 3.963374 TCATATGCAGCAGAAGGTAGACT 59.037 43.478 0.00 0.00 0.00 3.24
292 293 4.327982 TCATATGCAGCAGAAGGTAGAC 57.672 45.455 0.00 0.00 0.00 2.59
293 294 5.557576 ATTCATATGCAGCAGAAGGTAGA 57.442 39.130 0.00 0.00 0.00 2.59
294 295 6.368243 CACTATTCATATGCAGCAGAAGGTAG 59.632 42.308 0.00 3.08 0.00 3.18
295 296 6.183361 ACACTATTCATATGCAGCAGAAGGTA 60.183 38.462 0.00 0.00 0.00 3.08
296 297 5.061853 CACTATTCATATGCAGCAGAAGGT 58.938 41.667 0.00 0.56 0.00 3.50
297 298 5.061853 ACACTATTCATATGCAGCAGAAGG 58.938 41.667 0.00 0.00 0.00 3.46
298 299 5.756833 TGACACTATTCATATGCAGCAGAAG 59.243 40.000 0.00 0.00 0.00 2.85
299 300 5.673514 TGACACTATTCATATGCAGCAGAA 58.326 37.500 0.00 0.00 0.00 3.02
300 301 5.280654 TGACACTATTCATATGCAGCAGA 57.719 39.130 0.00 0.00 0.00 4.26
301 302 6.555812 AATGACACTATTCATATGCAGCAG 57.444 37.500 0.00 0.00 35.02 4.24
302 303 6.769341 AGAAATGACACTATTCATATGCAGCA 59.231 34.615 0.00 0.00 35.02 4.41
303 304 7.199541 AGAAATGACACTATTCATATGCAGC 57.800 36.000 0.00 0.00 35.02 5.25
315 316 9.140286 CGAAGAGAAACAATAGAAATGACACTA 57.860 33.333 0.00 0.00 0.00 2.74
316 317 7.872993 TCGAAGAGAAACAATAGAAATGACACT 59.127 33.333 0.00 0.00 0.00 3.55
317 318 8.018677 TCGAAGAGAAACAATAGAAATGACAC 57.981 34.615 0.00 0.00 0.00 3.67
318 319 8.601845 TTCGAAGAGAAACAATAGAAATGACA 57.398 30.769 0.00 0.00 38.43 3.58
332 333 4.351874 ACATGGGAGTTTCGAAGAGAAA 57.648 40.909 0.00 0.00 45.76 2.52
333 334 4.351874 AACATGGGAGTTTCGAAGAGAA 57.648 40.909 0.00 0.00 38.43 2.87
334 335 4.351874 AAACATGGGAGTTTCGAAGAGA 57.648 40.909 0.00 0.00 37.11 3.10
335 336 4.515191 TCAAAACATGGGAGTTTCGAAGAG 59.485 41.667 0.00 0.00 40.60 2.85
336 337 4.456535 TCAAAACATGGGAGTTTCGAAGA 58.543 39.130 0.00 0.00 40.60 2.87
337 338 4.829064 TCAAAACATGGGAGTTTCGAAG 57.171 40.909 0.00 0.00 40.60 3.79
338 339 4.884744 TCTTCAAAACATGGGAGTTTCGAA 59.115 37.500 0.00 0.00 40.60 3.71
339 340 4.274950 GTCTTCAAAACATGGGAGTTTCGA 59.725 41.667 0.00 0.00 40.60 3.71
340 341 4.275936 AGTCTTCAAAACATGGGAGTTTCG 59.724 41.667 0.00 0.00 40.60 3.46
341 342 5.774498 AGTCTTCAAAACATGGGAGTTTC 57.226 39.130 0.00 0.00 40.60 2.78
342 343 5.069119 GGAAGTCTTCAAAACATGGGAGTTT 59.931 40.000 14.49 0.00 43.13 2.66
343 344 4.584743 GGAAGTCTTCAAAACATGGGAGTT 59.415 41.667 14.49 0.00 32.03 3.01
344 345 4.145052 GGAAGTCTTCAAAACATGGGAGT 58.855 43.478 14.49 0.00 0.00 3.85
345 346 4.144297 TGGAAGTCTTCAAAACATGGGAG 58.856 43.478 14.49 0.00 0.00 4.30
346 347 4.177537 TGGAAGTCTTCAAAACATGGGA 57.822 40.909 14.49 0.00 0.00 4.37
347 348 6.588719 TTATGGAAGTCTTCAAAACATGGG 57.411 37.500 14.49 0.00 0.00 4.00
348 349 8.885494 TTTTTATGGAAGTCTTCAAAACATGG 57.115 30.769 14.49 0.00 0.00 3.66
351 352 9.528018 GTGATTTTTATGGAAGTCTTCAAAACA 57.472 29.630 14.49 7.76 0.00 2.83
352 353 8.978539 GGTGATTTTTATGGAAGTCTTCAAAAC 58.021 33.333 14.49 5.55 0.00 2.43
353 354 8.923270 AGGTGATTTTTATGGAAGTCTTCAAAA 58.077 29.630 14.49 11.70 0.00 2.44
354 355 8.477419 AGGTGATTTTTATGGAAGTCTTCAAA 57.523 30.769 14.49 6.26 0.00 2.69
355 356 9.753674 ATAGGTGATTTTTATGGAAGTCTTCAA 57.246 29.630 14.49 3.27 0.00 2.69
356 357 9.753674 AATAGGTGATTTTTATGGAAGTCTTCA 57.246 29.630 14.49 1.54 0.00 3.02
358 359 9.753674 TGAATAGGTGATTTTTATGGAAGTCTT 57.246 29.630 0.00 0.00 0.00 3.01
359 360 9.178758 GTGAATAGGTGATTTTTATGGAAGTCT 57.821 33.333 0.00 0.00 0.00 3.24
360 361 8.406297 GGTGAATAGGTGATTTTTATGGAAGTC 58.594 37.037 0.00 0.00 0.00 3.01
361 362 7.342026 GGGTGAATAGGTGATTTTTATGGAAGT 59.658 37.037 0.00 0.00 0.00 3.01
362 363 7.201911 GGGGTGAATAGGTGATTTTTATGGAAG 60.202 40.741 0.00 0.00 0.00 3.46
363 364 6.609616 GGGGTGAATAGGTGATTTTTATGGAA 59.390 38.462 0.00 0.00 0.00 3.53
364 365 6.133356 GGGGTGAATAGGTGATTTTTATGGA 58.867 40.000 0.00 0.00 0.00 3.41
365 366 5.304357 GGGGGTGAATAGGTGATTTTTATGG 59.696 44.000 0.00 0.00 0.00 2.74
366 367 6.405278 GGGGGTGAATAGGTGATTTTTATG 57.595 41.667 0.00 0.00 0.00 1.90
401 402 9.309516 CCGATTACTAAAAGTGCTAGTTATCAA 57.690 33.333 8.75 0.00 36.14 2.57
402 403 8.472413 ACCGATTACTAAAAGTGCTAGTTATCA 58.528 33.333 8.75 0.00 36.14 2.15
403 404 8.868635 ACCGATTACTAAAAGTGCTAGTTATC 57.131 34.615 0.00 0.00 34.40 1.75
404 405 9.741647 GTACCGATTACTAAAAGTGCTAGTTAT 57.258 33.333 0.00 0.00 31.98 1.89
405 406 8.960591 AGTACCGATTACTAAAAGTGCTAGTTA 58.039 33.333 0.00 0.00 39.45 2.24
406 407 7.834803 AGTACCGATTACTAAAAGTGCTAGTT 58.165 34.615 0.00 0.00 39.45 2.24
407 408 7.401955 AGTACCGATTACTAAAAGTGCTAGT 57.598 36.000 0.00 0.00 39.45 2.57
408 409 6.632035 CGAGTACCGATTACTAAAAGTGCTAG 59.368 42.308 0.00 0.00 41.48 3.42
409 410 6.489675 CGAGTACCGATTACTAAAAGTGCTA 58.510 40.000 0.00 0.00 41.48 3.49
410 411 5.338365 CGAGTACCGATTACTAAAAGTGCT 58.662 41.667 0.00 0.00 41.48 4.40
411 412 4.027050 GCGAGTACCGATTACTAAAAGTGC 60.027 45.833 7.77 0.00 41.48 4.40
412 413 5.338365 AGCGAGTACCGATTACTAAAAGTG 58.662 41.667 7.77 0.00 41.48 3.16
413 414 5.573337 AGCGAGTACCGATTACTAAAAGT 57.427 39.130 7.77 0.00 41.48 2.66
414 415 6.723282 AGTAGCGAGTACCGATTACTAAAAG 58.277 40.000 7.77 0.00 41.48 2.27
415 416 6.683974 AGTAGCGAGTACCGATTACTAAAA 57.316 37.500 7.77 0.00 41.48 1.52
416 417 6.489675 CAAGTAGCGAGTACCGATTACTAAA 58.510 40.000 14.98 0.00 41.48 1.85
417 418 5.504665 GCAAGTAGCGAGTACCGATTACTAA 60.505 44.000 14.98 0.00 41.48 2.24
418 419 4.024556 GCAAGTAGCGAGTACCGATTACTA 60.025 45.833 14.98 4.52 41.48 1.82
419 420 3.243002 GCAAGTAGCGAGTACCGATTACT 60.243 47.826 7.77 10.15 44.35 2.24
420 421 3.041492 GCAAGTAGCGAGTACCGATTAC 58.959 50.000 7.77 8.52 41.76 1.89
454 455 3.509967 TCCTCGTAGCAACTTGAGAATGA 59.490 43.478 0.00 0.00 0.00 2.57
456 457 3.511934 AGTCCTCGTAGCAACTTGAGAAT 59.488 43.478 0.00 0.00 0.00 2.40
475 476 6.536941 GGATTCCTACATGAGAAAGTTCAGTC 59.463 42.308 0.00 0.00 0.00 3.51
530 531 9.393512 CATATGAGAGAAAACTTGAGGATCTTT 57.606 33.333 0.00 0.00 34.92 2.52
534 535 8.954350 CAAACATATGAGAGAAAACTTGAGGAT 58.046 33.333 10.38 0.00 0.00 3.24
578 579 3.583806 CATTCATTAGCACCCGCAAAAA 58.416 40.909 0.00 0.00 42.27 1.94
579 580 2.673610 GCATTCATTAGCACCCGCAAAA 60.674 45.455 0.00 0.00 42.27 2.44
580 581 1.135141 GCATTCATTAGCACCCGCAAA 60.135 47.619 0.00 0.00 42.27 3.68
581 582 0.455410 GCATTCATTAGCACCCGCAA 59.545 50.000 0.00 0.00 42.27 4.85
582 583 0.679321 TGCATTCATTAGCACCCGCA 60.679 50.000 0.00 0.00 42.27 5.69
583 584 0.670162 ATGCATTCATTAGCACCCGC 59.330 50.000 0.00 0.00 44.49 6.13
584 585 4.771590 AATATGCATTCATTAGCACCCG 57.228 40.909 3.54 0.00 44.49 5.28
585 586 5.922544 GTCAAATATGCATTCATTAGCACCC 59.077 40.000 3.54 0.00 44.49 4.61
586 587 6.418819 GTGTCAAATATGCATTCATTAGCACC 59.581 38.462 3.54 0.00 44.49 5.01
587 588 7.166970 CAGTGTCAAATATGCATTCATTAGCAC 59.833 37.037 3.54 9.39 44.49 4.40
588 589 7.067251 TCAGTGTCAAATATGCATTCATTAGCA 59.933 33.333 3.54 0.00 45.92 3.49
589 590 7.377928 GTCAGTGTCAAATATGCATTCATTAGC 59.622 37.037 3.54 0.00 34.22 3.09
671 672 2.829914 GCCATGCGCAATCCCTCA 60.830 61.111 17.11 0.00 37.47 3.86
694 695 0.875728 CAGATCCTCCGCGTAGGTAG 59.124 60.000 18.01 2.63 41.99 3.18
702 703 0.460987 CTTGTCACCAGATCCTCCGC 60.461 60.000 0.00 0.00 0.00 5.54
826 827 2.238521 ACAATTGTTTGATCAGGCCGT 58.761 42.857 4.92 0.00 36.64 5.68
827 828 3.440173 ACTACAATTGTTTGATCAGGCCG 59.560 43.478 17.78 0.00 36.64 6.13
856 857 5.599656 AGGGATGCATGCATTTGTTACTTAT 59.400 36.000 32.60 8.24 36.70 1.73
913 916 9.167311 GGATATATGTATTGAGTTGATTCCACC 57.833 37.037 0.00 0.00 0.00 4.61
963 966 3.083349 TCCAGCGCTGCATACCCT 61.083 61.111 31.96 0.00 0.00 4.34
977 980 0.249120 CCCTTGTCACGCATACTCCA 59.751 55.000 0.00 0.00 0.00 3.86
988 991 3.576078 AAGTGTCATGTTCCCTTGTCA 57.424 42.857 0.00 0.00 0.00 3.58
990 993 4.821805 CACTTAAGTGTCATGTTCCCTTGT 59.178 41.667 24.70 0.00 40.96 3.16
1015 1018 7.994194 AGAATAACTCCGAAACTATAGACGTT 58.006 34.615 6.78 0.00 0.00 3.99
1043 1046 2.262915 GCCCACTGAGTGTCTCCG 59.737 66.667 12.15 0.00 0.00 4.63
1100 1103 6.471146 GGATGCATTTGTGAGATAGTAGGAT 58.529 40.000 0.00 0.00 0.00 3.24
1145 1148 9.852091 ATCTCAAGAAGAAAAGAAATTATGTGC 57.148 29.630 0.00 0.00 37.61 4.57
1210 1215 7.517614 TTCCAACAATCATAAAGCTGTGTAA 57.482 32.000 0.00 0.00 0.00 2.41
1217 1222 5.869344 GGAGGTTTTCCAACAATCATAAAGC 59.131 40.000 0.00 0.00 46.01 3.51
1255 1262 1.890876 TGTTTGACTCCCACAATCCG 58.109 50.000 0.00 0.00 0.00 4.18
1268 1275 2.093306 AGTTCCGCGATCATGTTTGA 57.907 45.000 8.23 0.00 36.00 2.69
1270 1277 2.416547 CAGAAGTTCCGCGATCATGTTT 59.583 45.455 8.23 0.00 0.00 2.83
1295 1302 5.042463 TCAAAGAGTGGTACCATTGTTGA 57.958 39.130 19.72 20.33 0.00 3.18
1314 1321 2.973899 GCTCAGGCTCGGACTCAA 59.026 61.111 0.00 0.00 35.22 3.02
1421 1428 0.097674 GTCGTGCTCATCAACATGGC 59.902 55.000 0.00 0.00 0.00 4.40
1450 1457 0.960364 GCATTCTTCTTGGCCGGTCA 60.960 55.000 3.51 3.51 0.00 4.02
1467 1474 3.418913 CGCAATCCAACGACGGCA 61.419 61.111 0.00 0.00 0.00 5.69
1471 1478 1.369625 ATCCTTCGCAATCCAACGAC 58.630 50.000 0.00 0.00 38.17 4.34
1472 1479 2.006888 GAATCCTTCGCAATCCAACGA 58.993 47.619 0.00 0.00 36.32 3.85
1474 1481 3.699067 CATGAATCCTTCGCAATCCAAC 58.301 45.455 0.00 0.00 0.00 3.77
1600 1610 9.747898 TTCCTGCCTAGAAATTTAGTTAAATCA 57.252 29.630 0.00 0.00 35.00 2.57
1627 1637 1.308998 AGACCACGGAACAAAAGCAG 58.691 50.000 0.00 0.00 0.00 4.24
1678 1691 5.469084 GGAAACACCGACATTTTTAGAGAGT 59.531 40.000 0.00 0.00 0.00 3.24
1697 1714 2.959507 AACACAAGCCACAAGGAAAC 57.040 45.000 0.00 0.00 36.89 2.78
1762 1779 6.653273 AGTGCATATATGATTGTGTATCGC 57.347 37.500 17.10 2.25 35.94 4.58
1772 1789 4.467795 ACCCGAAGCTAGTGCATATATGAT 59.532 41.667 17.10 4.07 42.74 2.45
1776 1793 4.100344 TCAAACCCGAAGCTAGTGCATATA 59.900 41.667 0.00 0.00 42.74 0.86
1806 1823 8.458573 TCTGAACTTCTAAATGTGGCTAAAAA 57.541 30.769 0.00 0.00 0.00 1.94
1813 1830 5.997746 TGGACTTCTGAACTTCTAAATGTGG 59.002 40.000 0.00 0.00 0.00 4.17
1859 1876 6.104146 TGAGTTATACCTTACTGTGCACAA 57.896 37.500 21.98 3.65 0.00 3.33
1904 1921 3.593442 ATGGGAAGTGAAGTCAACCAA 57.407 42.857 0.00 0.00 0.00 3.67
2118 2139 3.323729 TCTACTTGAACCGCGTATACG 57.676 47.619 20.87 20.87 43.27 3.06
2121 2142 2.802057 GCCATCTACTTGAACCGCGTAT 60.802 50.000 4.92 0.00 0.00 3.06
2125 2146 0.392461 TGGCCATCTACTTGAACCGC 60.392 55.000 0.00 0.00 0.00 5.68
2139 2160 5.485353 TGTTGGGTAAAAATATCATTGGCCA 59.515 36.000 0.00 0.00 0.00 5.36
2446 2467 2.584608 CCTAAGGCGTGGAGTGGG 59.415 66.667 0.00 0.00 0.00 4.61
2447 2468 2.125106 GCCTAAGGCGTGGAGTGG 60.125 66.667 0.00 0.00 39.62 4.00
2457 2478 6.258947 GCTCAAGACTAAGTTAATGCCTAAGG 59.741 42.308 0.00 0.00 0.00 2.69
2458 2479 6.019479 CGCTCAAGACTAAGTTAATGCCTAAG 60.019 42.308 0.00 0.00 0.00 2.18
2459 2480 5.810587 CGCTCAAGACTAAGTTAATGCCTAA 59.189 40.000 0.00 0.00 0.00 2.69
2460 2481 5.126545 TCGCTCAAGACTAAGTTAATGCCTA 59.873 40.000 0.00 0.00 0.00 3.93
2461 2482 4.081642 TCGCTCAAGACTAAGTTAATGCCT 60.082 41.667 0.00 0.00 0.00 4.75
2462 2483 4.033014 GTCGCTCAAGACTAAGTTAATGCC 59.967 45.833 0.00 0.00 38.09 4.40
2463 2484 5.132437 GTCGCTCAAGACTAAGTTAATGC 57.868 43.478 0.00 0.00 38.09 3.56
2474 2495 5.965918 GGCAAAATATAAAGTCGCTCAAGAC 59.034 40.000 0.00 0.00 41.23 3.01
2475 2496 5.220586 CGGCAAAATATAAAGTCGCTCAAGA 60.221 40.000 0.00 0.00 0.00 3.02
2476 2497 4.963953 CGGCAAAATATAAAGTCGCTCAAG 59.036 41.667 0.00 0.00 0.00 3.02
2477 2498 4.904116 CGGCAAAATATAAAGTCGCTCAA 58.096 39.130 0.00 0.00 0.00 3.02
2478 2499 4.530094 CGGCAAAATATAAAGTCGCTCA 57.470 40.909 0.00 0.00 0.00 4.26
2482 2503 6.567769 AAAATGCGGCAAAATATAAAGTCG 57.432 33.333 6.82 0.00 0.00 4.18
2483 2504 7.958674 TGAAAAATGCGGCAAAATATAAAGTC 58.041 30.769 6.82 0.00 0.00 3.01
2484 2505 7.816995 TCTGAAAAATGCGGCAAAATATAAAGT 59.183 29.630 6.82 0.00 0.00 2.66
2485 2506 8.183830 TCTGAAAAATGCGGCAAAATATAAAG 57.816 30.769 6.82 0.00 0.00 1.85
2486 2507 8.539770 TTCTGAAAAATGCGGCAAAATATAAA 57.460 26.923 6.82 0.00 0.00 1.40
2487 2508 8.602328 CATTCTGAAAAATGCGGCAAAATATAA 58.398 29.630 6.82 0.00 30.45 0.98
2488 2509 7.763528 ACATTCTGAAAAATGCGGCAAAATATA 59.236 29.630 6.82 0.00 39.72 0.86
2489 2510 6.594937 ACATTCTGAAAAATGCGGCAAAATAT 59.405 30.769 6.82 0.00 39.72 1.28
2490 2511 5.931146 ACATTCTGAAAAATGCGGCAAAATA 59.069 32.000 6.82 0.00 39.72 1.40
2491 2512 4.756135 ACATTCTGAAAAATGCGGCAAAAT 59.244 33.333 6.82 0.00 39.72 1.82
2492 2513 4.025061 CACATTCTGAAAAATGCGGCAAAA 60.025 37.500 6.82 0.00 39.72 2.44
2493 2514 3.493877 CACATTCTGAAAAATGCGGCAAA 59.506 39.130 6.82 0.00 39.72 3.68
2494 2515 3.058450 CACATTCTGAAAAATGCGGCAA 58.942 40.909 6.82 0.00 39.72 4.52
2495 2516 2.674954 CACATTCTGAAAAATGCGGCA 58.325 42.857 4.58 4.58 39.72 5.69
2496 2517 1.391144 GCACATTCTGAAAAATGCGGC 59.609 47.619 7.75 0.00 39.72 6.53
2497 2518 1.650153 CGCACATTCTGAAAAATGCGG 59.350 47.619 25.71 14.54 43.55 5.69
2498 2519 2.583739 TCGCACATTCTGAAAAATGCG 58.416 42.857 26.67 26.67 46.23 4.73
2499 2520 5.520022 AAATCGCACATTCTGAAAAATGC 57.480 34.783 11.64 11.64 39.72 3.56
2520 2541 7.473735 TGATTAGGATGCACATAACCAAAAA 57.526 32.000 0.00 0.00 0.00 1.94
2521 2542 7.658525 ATGATTAGGATGCACATAACCAAAA 57.341 32.000 0.00 0.00 0.00 2.44
2522 2543 7.777440 TGTATGATTAGGATGCACATAACCAAA 59.223 33.333 0.00 0.00 0.00 3.28
2523 2544 7.286313 TGTATGATTAGGATGCACATAACCAA 58.714 34.615 0.00 0.00 0.00 3.67
2524 2545 6.836242 TGTATGATTAGGATGCACATAACCA 58.164 36.000 0.00 0.00 0.00 3.67
2525 2546 7.161404 TCTGTATGATTAGGATGCACATAACC 58.839 38.462 0.00 0.00 0.00 2.85
2526 2547 7.875041 ACTCTGTATGATTAGGATGCACATAAC 59.125 37.037 0.00 0.00 0.00 1.89
2527 2548 7.966812 ACTCTGTATGATTAGGATGCACATAA 58.033 34.615 0.00 0.00 0.00 1.90
2528 2549 7.310052 GGACTCTGTATGATTAGGATGCACATA 60.310 40.741 0.00 0.00 0.00 2.29
2529 2550 6.430962 ACTCTGTATGATTAGGATGCACAT 57.569 37.500 0.00 0.00 0.00 3.21
2530 2551 5.221521 GGACTCTGTATGATTAGGATGCACA 60.222 44.000 0.00 0.00 0.00 4.57
2531 2552 5.233988 GGACTCTGTATGATTAGGATGCAC 58.766 45.833 0.00 0.00 0.00 4.57
2532 2553 4.021981 CGGACTCTGTATGATTAGGATGCA 60.022 45.833 0.00 0.00 0.00 3.96
2533 2554 4.489810 CGGACTCTGTATGATTAGGATGC 58.510 47.826 0.00 0.00 0.00 3.91
2534 2555 4.767409 TCCGGACTCTGTATGATTAGGATG 59.233 45.833 0.00 0.00 0.00 3.51
2535 2556 4.999310 TCCGGACTCTGTATGATTAGGAT 58.001 43.478 0.00 0.00 0.00 3.24
2536 2557 4.448720 TCCGGACTCTGTATGATTAGGA 57.551 45.455 0.00 0.00 0.00 2.94
2537 2558 4.524714 ACATCCGGACTCTGTATGATTAGG 59.475 45.833 6.12 0.00 0.00 2.69
2538 2559 5.713792 ACATCCGGACTCTGTATGATTAG 57.286 43.478 6.12 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.