Multiple sequence alignment - TraesCS2B01G560300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G560300 chr2B 100.000 3710 0 0 1 3710 753809041 753805332 0.000000e+00 6852.0
1 TraesCS2B01G560300 chr2B 95.728 2177 91 2 583 2759 753785794 753787968 0.000000e+00 3504.0
2 TraesCS2B01G560300 chr2B 93.599 1859 116 3 901 2759 753930807 753928952 0.000000e+00 2771.0
3 TraesCS2B01G560300 chr2B 96.648 358 5 2 1 358 753785433 753785783 4.130000e-164 588.0
4 TraesCS2B01G560300 chr2B 85.263 190 10 6 706 877 753940055 753939866 2.940000e-41 180.0
5 TraesCS2B01G560300 chr2B 89.247 93 7 3 12 102 773348886 773348795 3.030000e-21 113.0
6 TraesCS2B01G560300 chr2B 96.774 31 1 0 577 607 753785861 753785891 7.000000e-03 52.8
7 TraesCS2B01G560300 chr2B 100.000 28 0 0 580 607 753808389 753808362 7.000000e-03 52.8
8 TraesCS2B01G560300 chr2B 100.000 28 0 0 653 680 753808462 753808435 7.000000e-03 52.8
9 TraesCS2B01G560300 chr2D 91.634 2307 182 8 902 3202 617546949 617549250 0.000000e+00 3181.0
10 TraesCS2B01G560300 chr2D 90.744 2312 200 7 901 3204 617887801 617890106 0.000000e+00 3072.0
11 TraesCS2B01G560300 chr2D 89.154 2259 204 17 901 3122 617909286 617907032 0.000000e+00 2776.0
12 TraesCS2B01G560300 chr2D 91.662 1859 153 2 902 2759 617539334 617541191 0.000000e+00 2573.0
13 TraesCS2B01G560300 chr2D 90.816 196 13 4 1 191 617523349 617523544 1.320000e-64 257.0
14 TraesCS2B01G560300 chr2D 88.205 195 18 4 616 808 617538167 617538358 1.040000e-55 228.0
15 TraesCS2B01G560300 chr2D 88.701 177 11 4 709 877 617915943 617915768 1.350000e-49 207.0
16 TraesCS2B01G560300 chr2D 82.796 186 15 10 3208 3376 617890181 617890366 2.310000e-32 150.0
17 TraesCS2B01G560300 chr2D 94.624 93 5 0 709 801 617637378 617637470 1.070000e-30 145.0
18 TraesCS2B01G560300 chr2D 88.281 128 3 2 133 260 617537495 617537610 3.860000e-30 143.0
19 TraesCS2B01G560300 chr2D 82.840 169 8 13 3554 3710 627038892 627039051 8.360000e-27 132.0
20 TraesCS2B01G560300 chr2A 91.157 2307 192 8 902 3204 748438048 748440346 0.000000e+00 3120.0
21 TraesCS2B01G560300 chr2A 92.189 1882 145 2 901 2781 748503094 748501214 0.000000e+00 2660.0
22 TraesCS2B01G560300 chr2A 90.711 1927 176 3 901 2826 748285638 748287562 0.000000e+00 2564.0
23 TraesCS2B01G560300 chr2A 89.693 2018 188 12 1198 3202 748400735 748402745 0.000000e+00 2556.0
24 TraesCS2B01G560300 chr2A 90.671 1147 97 8 1827 2968 748220973 748222114 0.000000e+00 1517.0
25 TraesCS2B01G560300 chr2A 78.328 586 72 29 281 821 748203023 748203598 9.930000e-86 327.0
26 TraesCS2B01G560300 chr2A 95.489 133 6 0 128 260 748199950 748200082 2.900000e-51 213.0
27 TraesCS2B01G560300 chr2A 82.759 261 23 16 3208 3446 748440421 748440681 2.900000e-51 213.0
28 TraesCS2B01G560300 chr7B 96.679 271 9 0 2934 3204 7811067 7810797 5.650000e-123 451.0
29 TraesCS2B01G560300 chr7B 88.991 109 3 3 3204 3303 7810643 7810535 3.890000e-25 126.0
30 TraesCS2B01G560300 chr3B 85.366 164 11 7 3557 3710 606379303 606379463 1.380000e-34 158.0
31 TraesCS2B01G560300 chr6B 92.453 106 4 4 718 820 521042384 521042280 8.300000e-32 148.0
32 TraesCS2B01G560300 chr6B 88.288 111 8 4 3553 3662 640981895 640981789 1.080000e-25 128.0
33 TraesCS2B01G560300 chr6B 87.387 111 11 3 3554 3662 157641494 157641603 1.400000e-24 124.0
34 TraesCS2B01G560300 chr6B 85.321 109 8 5 262 370 4491760 4491860 5.070000e-19 106.0
35 TraesCS2B01G560300 chr6D 92.157 102 6 2 718 818 379851151 379851251 3.860000e-30 143.0
36 TraesCS2B01G560300 chr6D 87.500 112 9 4 3554 3662 82591065 82591174 1.400000e-24 124.0
37 TraesCS2B01G560300 chr6D 86.408 103 6 5 268 370 2101749 2101655 5.070000e-19 106.0
38 TraesCS2B01G560300 chr6A 83.432 169 12 10 3554 3710 592346561 592346397 3.860000e-30 143.0
39 TraesCS2B01G560300 chr6A 85.321 109 8 5 262 370 797295 797395 5.070000e-19 106.0
40 TraesCS2B01G560300 chr1B 83.133 166 14 7 3554 3710 470724253 470724093 5.000000e-29 139.0
41 TraesCS2B01G560300 chr1D 90.385 104 8 2 712 813 10397507 10397404 6.460000e-28 135.0
42 TraesCS2B01G560300 chr7D 82.635 167 12 7 3554 3710 533486223 533486064 8.360000e-27 132.0
43 TraesCS2B01G560300 chr7D 80.625 160 18 7 3554 3710 520343235 520343384 1.090000e-20 111.0
44 TraesCS2B01G560300 chr7A 77.500 160 20 9 289 442 41045483 41045632 8.540000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G560300 chr2B 753805332 753809041 3709 True 2319.200000 6852 100.000000 1 3710 3 chr2B.!!$R4 3709
1 TraesCS2B01G560300 chr2B 753928952 753930807 1855 True 2771.000000 2771 93.599000 901 2759 1 chr2B.!!$R1 1858
2 TraesCS2B01G560300 chr2B 753785433 753787968 2535 False 1381.600000 3504 96.383333 1 2759 3 chr2B.!!$F1 2758
3 TraesCS2B01G560300 chr2D 617546949 617549250 2301 False 3181.000000 3181 91.634000 902 3202 1 chr2D.!!$F2 2300
4 TraesCS2B01G560300 chr2D 617907032 617909286 2254 True 2776.000000 2776 89.154000 901 3122 1 chr2D.!!$R1 2221
5 TraesCS2B01G560300 chr2D 617887801 617890366 2565 False 1611.000000 3072 86.770000 901 3376 2 chr2D.!!$F6 2475
6 TraesCS2B01G560300 chr2D 617537495 617541191 3696 False 981.333333 2573 89.382667 133 2759 3 chr2D.!!$F5 2626
7 TraesCS2B01G560300 chr2A 748501214 748503094 1880 True 2660.000000 2660 92.189000 901 2781 1 chr2A.!!$R1 1880
8 TraesCS2B01G560300 chr2A 748285638 748287562 1924 False 2564.000000 2564 90.711000 901 2826 1 chr2A.!!$F2 1925
9 TraesCS2B01G560300 chr2A 748400735 748402745 2010 False 2556.000000 2556 89.693000 1198 3202 1 chr2A.!!$F3 2004
10 TraesCS2B01G560300 chr2A 748438048 748440681 2633 False 1666.500000 3120 86.958000 902 3446 2 chr2A.!!$F5 2544
11 TraesCS2B01G560300 chr2A 748220973 748222114 1141 False 1517.000000 1517 90.671000 1827 2968 1 chr2A.!!$F1 1141
12 TraesCS2B01G560300 chr2A 748199950 748203598 3648 False 270.000000 327 86.908500 128 821 2 chr2A.!!$F4 693
13 TraesCS2B01G560300 chr7B 7810535 7811067 532 True 288.500000 451 92.835000 2934 3303 2 chr7B.!!$R1 369

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 731 0.182775 ACGGGGTTGCTCAAGAAACT 59.817 50.000 1.01 0.0 34.00 2.66 F
440 732 0.875059 CGGGGTTGCTCAAGAAACTC 59.125 55.000 1.01 0.0 33.12 3.01 F
2041 4470 1.135774 TCGACGACGGATTGAGTCTTG 60.136 52.381 7.55 0.0 40.21 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2052 4481 1.073284 GGCTTAACCCCACTGAGTGAA 59.927 52.381 15.33 0.0 35.23 3.18 R
2153 4902 4.858850 TGGTATGCCACTTTCATTCATCT 58.141 39.130 0.00 0.0 40.46 2.90 R
3455 7007 0.108615 GCTGCTCTTCTAACTCCGCA 60.109 55.000 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 3.681594 CGGATGTGGCAACTACCTAACAT 60.682 47.826 0.00 0.00 37.61 2.71
103 104 3.627577 GGATGTGGCAACTACCTAACATG 59.372 47.826 0.00 0.00 37.61 3.21
104 105 4.513442 GATGTGGCAACTACCTAACATGA 58.487 43.478 0.00 0.00 37.61 3.07
105 106 4.568072 TGTGGCAACTACCTAACATGAT 57.432 40.909 0.00 0.00 37.61 2.45
106 107 4.917385 TGTGGCAACTACCTAACATGATT 58.083 39.130 0.00 0.00 37.61 2.57
107 108 4.699735 TGTGGCAACTACCTAACATGATTG 59.300 41.667 0.00 0.00 37.61 2.67
108 109 4.700213 GTGGCAACTACCTAACATGATTGT 59.300 41.667 0.00 0.00 35.55 2.71
109 110 4.941263 TGGCAACTACCTAACATGATTGTC 59.059 41.667 0.00 0.00 33.39 3.18
260 261 6.643360 GCTCGATTTCTCCCTCTATTAGAAAC 59.357 42.308 0.00 0.00 40.85 2.78
351 622 4.292186 TCCTCCTCTTGTCAAATGAAGG 57.708 45.455 0.00 0.00 0.00 3.46
372 664 2.749621 GTGACCATGGGAATCACAAGAC 59.250 50.000 22.70 2.01 41.94 3.01
401 693 8.453320 TGTGACAGAACATAAAGCTTATCAATG 58.547 33.333 0.00 4.52 0.00 2.82
402 694 7.430502 GTGACAGAACATAAAGCTTATCAATGC 59.569 37.037 0.00 0.00 0.00 3.56
403 695 7.121020 TGACAGAACATAAAGCTTATCAATGCA 59.879 33.333 0.00 0.00 0.00 3.96
404 696 7.253422 ACAGAACATAAAGCTTATCAATGCAC 58.747 34.615 0.00 0.76 0.00 4.57
405 697 6.694411 CAGAACATAAAGCTTATCAATGCACC 59.306 38.462 0.00 0.00 0.00 5.01
408 700 6.742109 ACATAAAGCTTATCAATGCACCATC 58.258 36.000 0.00 0.00 0.00 3.51
410 702 2.590821 AGCTTATCAATGCACCATCCC 58.409 47.619 0.00 0.00 0.00 3.85
412 704 2.961062 GCTTATCAATGCACCATCCCTT 59.039 45.455 0.00 0.00 0.00 3.95
426 718 2.933834 CCTTGGAAGGGACGGGGT 60.934 66.667 0.00 0.00 42.66 4.95
427 719 2.535331 CCTTGGAAGGGACGGGGTT 61.535 63.158 0.00 0.00 42.66 4.11
428 720 1.303317 CTTGGAAGGGACGGGGTTG 60.303 63.158 0.00 0.00 0.00 3.77
429 721 3.501040 TTGGAAGGGACGGGGTTGC 62.501 63.158 0.00 0.00 0.00 4.17
430 722 3.647771 GGAAGGGACGGGGTTGCT 61.648 66.667 0.00 0.00 0.00 3.91
431 723 2.046217 GAAGGGACGGGGTTGCTC 60.046 66.667 0.00 0.00 0.00 4.26
432 724 2.852075 AAGGGACGGGGTTGCTCA 60.852 61.111 0.00 0.00 0.00 4.26
433 725 2.406002 GAAGGGACGGGGTTGCTCAA 62.406 60.000 0.00 0.00 0.00 3.02
436 728 1.072505 GGACGGGGTTGCTCAAGAA 59.927 57.895 0.00 0.00 0.00 2.52
437 729 0.536460 GGACGGGGTTGCTCAAGAAA 60.536 55.000 0.00 0.00 0.00 2.52
438 730 0.591659 GACGGGGTTGCTCAAGAAAC 59.408 55.000 0.00 0.00 32.72 2.78
439 731 0.182775 ACGGGGTTGCTCAAGAAACT 59.817 50.000 1.01 0.00 34.00 2.66
440 732 0.875059 CGGGGTTGCTCAAGAAACTC 59.125 55.000 1.01 0.00 33.12 3.01
441 733 1.813862 CGGGGTTGCTCAAGAAACTCA 60.814 52.381 3.18 0.00 35.69 3.41
442 734 2.306847 GGGGTTGCTCAAGAAACTCAA 58.693 47.619 3.18 0.00 35.69 3.02
443 735 2.294512 GGGGTTGCTCAAGAAACTCAAG 59.705 50.000 3.18 0.00 35.69 3.02
444 736 2.294512 GGGTTGCTCAAGAAACTCAAGG 59.705 50.000 1.01 0.00 34.10 3.61
445 737 2.952310 GGTTGCTCAAGAAACTCAAGGT 59.048 45.455 1.01 0.00 34.00 3.50
446 738 4.134563 GGTTGCTCAAGAAACTCAAGGTA 58.865 43.478 1.01 0.00 34.00 3.08
447 739 4.023963 GGTTGCTCAAGAAACTCAAGGTAC 60.024 45.833 1.01 0.00 34.00 3.34
448 740 4.415881 TGCTCAAGAAACTCAAGGTACA 57.584 40.909 0.00 0.00 0.00 2.90
449 741 4.776349 TGCTCAAGAAACTCAAGGTACAA 58.224 39.130 0.00 0.00 0.00 2.41
450 742 4.574828 TGCTCAAGAAACTCAAGGTACAAC 59.425 41.667 0.00 0.00 0.00 3.32
451 743 4.574828 GCTCAAGAAACTCAAGGTACAACA 59.425 41.667 0.00 0.00 0.00 3.33
452 744 5.277538 GCTCAAGAAACTCAAGGTACAACAG 60.278 44.000 0.00 0.00 0.00 3.16
453 745 4.574828 TCAAGAAACTCAAGGTACAACAGC 59.425 41.667 0.00 0.00 0.00 4.40
463 755 5.301551 TCAAGGTACAACAGCATCAAACATT 59.698 36.000 0.00 0.00 0.00 2.71
470 762 7.181143 ACAACAGCATCAAACATTCAATTTC 57.819 32.000 0.00 0.00 0.00 2.17
472 764 5.531634 ACAGCATCAAACATTCAATTTCGT 58.468 33.333 0.00 0.00 0.00 3.85
498 790 3.442996 GCATCGTGAGCCAGTAAGT 57.557 52.632 0.00 0.00 0.00 2.24
501 793 2.484264 GCATCGTGAGCCAGTAAGTTTT 59.516 45.455 0.00 0.00 0.00 2.43
502 794 3.667960 GCATCGTGAGCCAGTAAGTTTTG 60.668 47.826 0.00 0.00 0.00 2.44
503 795 2.489971 TCGTGAGCCAGTAAGTTTTGG 58.510 47.619 2.53 2.53 37.53 3.28
504 796 2.158871 TCGTGAGCCAGTAAGTTTTGGT 60.159 45.455 7.65 0.00 36.81 3.67
505 797 2.616842 CGTGAGCCAGTAAGTTTTGGTT 59.383 45.455 7.65 2.47 36.81 3.67
506 798 3.066203 CGTGAGCCAGTAAGTTTTGGTTT 59.934 43.478 7.65 0.00 36.81 3.27
507 799 4.359706 GTGAGCCAGTAAGTTTTGGTTTG 58.640 43.478 7.65 0.00 36.81 2.93
508 800 4.020543 TGAGCCAGTAAGTTTTGGTTTGT 58.979 39.130 7.65 0.00 36.81 2.83
509 801 4.464597 TGAGCCAGTAAGTTTTGGTTTGTT 59.535 37.500 7.65 0.00 36.81 2.83
510 802 4.754322 AGCCAGTAAGTTTTGGTTTGTTG 58.246 39.130 7.65 0.00 36.81 3.33
511 803 3.868661 GCCAGTAAGTTTTGGTTTGTTGG 59.131 43.478 7.65 0.00 36.81 3.77
512 804 4.382147 GCCAGTAAGTTTTGGTTTGTTGGA 60.382 41.667 7.65 0.00 36.81 3.53
513 805 5.683770 GCCAGTAAGTTTTGGTTTGTTGGAT 60.684 40.000 7.65 0.00 36.81 3.41
514 806 6.461788 GCCAGTAAGTTTTGGTTTGTTGGATA 60.462 38.462 7.65 0.00 36.81 2.59
515 807 7.493367 CCAGTAAGTTTTGGTTTGTTGGATAA 58.507 34.615 0.00 0.00 0.00 1.75
516 808 7.436970 CCAGTAAGTTTTGGTTTGTTGGATAAC 59.563 37.037 0.00 0.00 37.32 1.89
517 809 7.976734 CAGTAAGTTTTGGTTTGTTGGATAACA 59.023 33.333 0.00 0.00 44.66 2.41
538 830 1.957695 GCTTGGCCTGCAACAAAGC 60.958 57.895 11.61 11.61 0.00 3.51
563 856 9.628746 GCGAGGTTTTATCTTTTGGTAAATTAA 57.371 29.630 0.00 0.00 0.00 1.40
1793 4221 6.732154 TCTTCTATCCTGTAATAAACGACCG 58.268 40.000 0.00 0.00 0.00 4.79
1818 4246 3.004839 GCAAAGAAGGAAAGGTGAAGGAC 59.995 47.826 0.00 0.00 0.00 3.85
1857 4285 6.957631 TGACTTCATTGTAGGTATTGGTCAT 58.042 36.000 0.00 0.00 0.00 3.06
2024 4453 5.815740 GCTACTGTAAAATTGGAAGGATCGA 59.184 40.000 0.00 0.00 0.00 3.59
2028 4457 4.628333 TGTAAAATTGGAAGGATCGACGAC 59.372 41.667 0.00 0.00 0.00 4.34
2041 4470 1.135774 TCGACGACGGATTGAGTCTTG 60.136 52.381 7.55 0.00 40.21 3.02
2052 4481 5.012893 GGATTGAGTCTTGTCAGGGAAATT 58.987 41.667 0.00 0.00 0.00 1.82
2061 4490 4.437682 TGTCAGGGAAATTTCACTCAGT 57.562 40.909 20.23 0.00 39.37 3.41
2131 4560 2.550830 TTGCTCTGGGAGAACAGTTC 57.449 50.000 5.00 5.00 39.48 3.01
2187 4936 1.298340 CATACCAGTGGGCGTTGGA 59.702 57.895 15.21 0.00 37.89 3.53
2269 5018 3.908382 GCTGTTCAAGAAATTACGTGCTG 59.092 43.478 0.00 0.00 0.00 4.41
2308 5202 5.084818 TGTCATAACACTCACTACCATGG 57.915 43.478 11.19 11.19 0.00 3.66
2360 5677 4.405358 TGAAGAAGCCAAGGATTTGTTTGT 59.595 37.500 0.00 0.00 32.21 2.83
2407 5724 4.100344 TGCCTTCTGTTGTGACTTACAGTA 59.900 41.667 14.71 7.55 41.87 2.74
2442 5759 7.992608 ACAAATTTCATAAAAGAAGGGTTGCTT 59.007 29.630 0.00 0.00 0.00 3.91
2492 5809 2.033141 GAAGGCTGGCTGTGCTCA 59.967 61.111 3.84 0.00 0.00 4.26
2571 5888 2.409948 AGGCTGTGACTTATCTTGCC 57.590 50.000 0.00 0.00 36.27 4.52
2575 5892 3.445096 GGCTGTGACTTATCTTGCCAAAT 59.555 43.478 0.00 0.00 36.15 2.32
2794 6112 1.988956 GAATGCCATTGCCCCCACA 60.989 57.895 0.00 0.00 36.33 4.17
2812 6132 4.136051 CCACATGCCCTTTTTGAAAATGT 58.864 39.130 0.00 0.00 0.00 2.71
2819 6139 9.434420 CATGCCCTTTTTGAAAATGTAGATAAA 57.566 29.630 0.00 0.00 0.00 1.40
2865 6206 7.297391 TGATGTTTGATGTCACGTTCTAAATG 58.703 34.615 0.00 0.00 0.00 2.32
2876 6225 9.047371 TGTCACGTTCTAAATGAAATAACAAGA 57.953 29.630 0.00 0.00 36.30 3.02
2900 6249 1.690893 TGGCCTGAGAGTCATATGAGC 59.309 52.381 5.42 3.97 0.00 4.26
3204 6577 3.087031 GCTGTATTCATGGGCTGCATAT 58.913 45.455 0.50 0.00 0.00 1.78
3205 6578 3.128242 GCTGTATTCATGGGCTGCATATC 59.872 47.826 0.50 0.00 0.00 1.63
3206 6579 3.689347 TGTATTCATGGGCTGCATATCC 58.311 45.455 0.50 0.00 0.00 2.59
3251 6778 0.843309 TGTTTTGTGCTCCTCCCAGA 59.157 50.000 0.00 0.00 0.00 3.86
3252 6779 1.239347 GTTTTGTGCTCCTCCCAGAC 58.761 55.000 0.00 0.00 0.00 3.51
3316 6860 6.483687 ACCTTAATTCATCGTATGCGTTTTC 58.516 36.000 2.37 0.00 39.49 2.29
3317 6861 5.907391 CCTTAATTCATCGTATGCGTTTTCC 59.093 40.000 2.37 0.00 39.49 3.13
3319 6863 5.560966 AATTCATCGTATGCGTTTTCCTT 57.439 34.783 2.37 0.00 39.49 3.36
3326 6870 4.273969 TCGTATGCGTTTTCCTTTTTCTGT 59.726 37.500 2.37 0.00 39.49 3.41
3353 6898 3.837731 GCTAGAGCTATCAAGGGGAAGAT 59.162 47.826 0.00 0.00 38.21 2.40
3365 6910 2.172293 AGGGGAAGATGAACAGAGCATC 59.828 50.000 0.00 0.00 41.85 3.91
3383 6928 4.019860 AGCATCAAGGATCAGTGTTGTACT 60.020 41.667 0.00 0.00 41.36 2.73
3393 6938 0.951558 GTGTTGTACTGCTGTTGGGG 59.048 55.000 0.09 0.00 0.00 4.96
3395 6940 1.235724 GTTGTACTGCTGTTGGGGTC 58.764 55.000 0.09 0.00 0.00 4.46
3397 6942 0.685097 TGTACTGCTGTTGGGGTCTC 59.315 55.000 0.09 0.00 0.00 3.36
3398 6943 0.685097 GTACTGCTGTTGGGGTCTCA 59.315 55.000 0.09 0.00 0.00 3.27
3399 6944 1.279271 GTACTGCTGTTGGGGTCTCAT 59.721 52.381 0.09 0.00 0.00 2.90
3401 6946 0.617413 CTGCTGTTGGGGTCTCATCT 59.383 55.000 0.00 0.00 0.00 2.90
3404 6949 1.406614 GCTGTTGGGGTCTCATCTCTG 60.407 57.143 0.00 0.00 0.00 3.35
3410 6955 3.184628 TGGGGTCTCATCTCTGAAACAT 58.815 45.455 0.00 0.00 0.00 2.71
3411 6956 3.588842 TGGGGTCTCATCTCTGAAACATT 59.411 43.478 0.00 0.00 0.00 2.71
3417 6969 7.337942 GGGTCTCATCTCTGAAACATTTACATT 59.662 37.037 0.00 0.00 0.00 2.71
3418 6970 9.383519 GGTCTCATCTCTGAAACATTTACATTA 57.616 33.333 0.00 0.00 0.00 1.90
3458 7010 2.975410 TTTTCTGCTTGATGAGTGCG 57.025 45.000 0.00 0.00 0.00 5.34
3459 7011 1.159285 TTTCTGCTTGATGAGTGCGG 58.841 50.000 0.00 0.00 34.66 5.69
3460 7012 0.321346 TTCTGCTTGATGAGTGCGGA 59.679 50.000 0.00 0.00 39.92 5.54
3461 7013 0.108472 TCTGCTTGATGAGTGCGGAG 60.108 55.000 0.00 0.00 37.20 4.63
3462 7014 0.390866 CTGCTTGATGAGTGCGGAGT 60.391 55.000 0.00 0.00 35.28 3.85
3463 7015 0.035317 TGCTTGATGAGTGCGGAGTT 59.965 50.000 0.00 0.00 0.00 3.01
3464 7016 1.275010 TGCTTGATGAGTGCGGAGTTA 59.725 47.619 0.00 0.00 0.00 2.24
3465 7017 1.929836 GCTTGATGAGTGCGGAGTTAG 59.070 52.381 0.00 0.00 0.00 2.34
3466 7018 2.417379 GCTTGATGAGTGCGGAGTTAGA 60.417 50.000 0.00 0.00 0.00 2.10
3467 7019 3.849911 CTTGATGAGTGCGGAGTTAGAA 58.150 45.455 0.00 0.00 0.00 2.10
3468 7020 3.510388 TGATGAGTGCGGAGTTAGAAG 57.490 47.619 0.00 0.00 0.00 2.85
3469 7021 3.089284 TGATGAGTGCGGAGTTAGAAGA 58.911 45.455 0.00 0.00 0.00 2.87
3470 7022 3.129462 TGATGAGTGCGGAGTTAGAAGAG 59.871 47.826 0.00 0.00 0.00 2.85
3471 7023 1.202582 TGAGTGCGGAGTTAGAAGAGC 59.797 52.381 0.00 0.00 0.00 4.09
3472 7024 1.202582 GAGTGCGGAGTTAGAAGAGCA 59.797 52.381 0.00 0.00 0.00 4.26
3473 7025 1.203523 AGTGCGGAGTTAGAAGAGCAG 59.796 52.381 0.00 0.00 35.15 4.24
3474 7026 0.108615 TGCGGAGTTAGAAGAGCAGC 60.109 55.000 0.00 0.00 0.00 5.25
3475 7027 0.108615 GCGGAGTTAGAAGAGCAGCA 60.109 55.000 0.00 0.00 0.00 4.41
3476 7028 1.673033 GCGGAGTTAGAAGAGCAGCAA 60.673 52.381 0.00 0.00 0.00 3.91
3477 7029 2.266554 CGGAGTTAGAAGAGCAGCAAG 58.733 52.381 0.00 0.00 0.00 4.01
3478 7030 2.626840 GGAGTTAGAAGAGCAGCAAGG 58.373 52.381 0.00 0.00 0.00 3.61
3479 7031 2.626840 GAGTTAGAAGAGCAGCAAGGG 58.373 52.381 0.00 0.00 0.00 3.95
3480 7032 2.234908 GAGTTAGAAGAGCAGCAAGGGA 59.765 50.000 0.00 0.00 0.00 4.20
3481 7033 2.639839 AGTTAGAAGAGCAGCAAGGGAA 59.360 45.455 0.00 0.00 0.00 3.97
3482 7034 3.073062 AGTTAGAAGAGCAGCAAGGGAAA 59.927 43.478 0.00 0.00 0.00 3.13
3483 7035 2.895242 AGAAGAGCAGCAAGGGAAAT 57.105 45.000 0.00 0.00 0.00 2.17
3484 7036 2.444421 AGAAGAGCAGCAAGGGAAATG 58.556 47.619 0.00 0.00 0.00 2.32
3485 7037 2.040813 AGAAGAGCAGCAAGGGAAATGA 59.959 45.455 0.00 0.00 0.00 2.57
3486 7038 2.125773 AGAGCAGCAAGGGAAATGAG 57.874 50.000 0.00 0.00 0.00 2.90
3487 7039 1.632409 AGAGCAGCAAGGGAAATGAGA 59.368 47.619 0.00 0.00 0.00 3.27
3488 7040 2.241685 AGAGCAGCAAGGGAAATGAGAT 59.758 45.455 0.00 0.00 0.00 2.75
3489 7041 2.358267 GAGCAGCAAGGGAAATGAGATG 59.642 50.000 0.00 0.00 0.00 2.90
3490 7042 1.202382 GCAGCAAGGGAAATGAGATGC 60.202 52.381 0.00 0.00 0.00 3.91
3491 7043 2.376109 CAGCAAGGGAAATGAGATGCT 58.624 47.619 0.00 0.00 44.34 3.79
3492 7044 2.758979 CAGCAAGGGAAATGAGATGCTT 59.241 45.455 0.00 0.00 41.82 3.91
3493 7045 2.758979 AGCAAGGGAAATGAGATGCTTG 59.241 45.455 0.00 0.00 40.99 4.01
3494 7046 2.737679 GCAAGGGAAATGAGATGCTTGC 60.738 50.000 0.00 0.00 38.95 4.01
3495 7047 2.758979 CAAGGGAAATGAGATGCTTGCT 59.241 45.455 0.00 0.00 0.00 3.91
3496 7048 2.652590 AGGGAAATGAGATGCTTGCTC 58.347 47.619 0.00 0.00 0.00 4.26
3497 7049 1.332997 GGGAAATGAGATGCTTGCTCG 59.667 52.381 0.00 0.00 35.15 5.03
3498 7050 2.012673 GGAAATGAGATGCTTGCTCGT 58.987 47.619 0.00 0.00 35.15 4.18
3499 7051 2.031437 GGAAATGAGATGCTTGCTCGTC 59.969 50.000 0.00 0.00 35.15 4.20
3500 7052 1.661341 AATGAGATGCTTGCTCGTCC 58.339 50.000 0.00 0.00 35.15 4.79
3501 7053 0.538584 ATGAGATGCTTGCTCGTCCA 59.461 50.000 0.00 0.00 35.15 4.02
3502 7054 0.390340 TGAGATGCTTGCTCGTCCAC 60.390 55.000 0.00 0.00 35.15 4.02
3503 7055 1.416813 GAGATGCTTGCTCGTCCACG 61.417 60.000 0.00 0.00 41.45 4.94
3504 7056 3.088500 GATGCTTGCTCGTCCACGC 62.089 63.158 0.00 1.01 39.60 5.34
3537 7089 3.347958 TTTTTGCATTGACTGACGACC 57.652 42.857 0.00 0.00 0.00 4.79
3538 7090 2.254546 TTTGCATTGACTGACGACCT 57.745 45.000 0.00 0.00 0.00 3.85
3539 7091 1.795768 TTGCATTGACTGACGACCTC 58.204 50.000 0.00 0.00 0.00 3.85
3540 7092 0.388520 TGCATTGACTGACGACCTCG 60.389 55.000 0.00 0.00 46.33 4.63
3541 7093 1.078759 GCATTGACTGACGACCTCGG 61.079 60.000 0.00 0.00 44.95 4.63
3542 7094 0.526211 CATTGACTGACGACCTCGGA 59.474 55.000 0.00 0.00 44.95 4.55
3543 7095 1.067846 CATTGACTGACGACCTCGGAA 60.068 52.381 0.00 0.00 44.95 4.30
3544 7096 1.034356 TTGACTGACGACCTCGGAAA 58.966 50.000 0.00 0.00 44.95 3.13
3545 7097 1.254026 TGACTGACGACCTCGGAAAT 58.746 50.000 0.00 0.00 44.95 2.17
3546 7098 1.201647 TGACTGACGACCTCGGAAATC 59.798 52.381 0.00 0.00 44.95 2.17
3547 7099 0.531200 ACTGACGACCTCGGAAATCC 59.469 55.000 0.00 0.00 44.95 3.01
3548 7100 0.530744 CTGACGACCTCGGAAATCCA 59.469 55.000 0.00 0.00 44.95 3.41
3549 7101 0.970640 TGACGACCTCGGAAATCCAA 59.029 50.000 0.00 0.00 44.95 3.53
3550 7102 1.553248 TGACGACCTCGGAAATCCAAT 59.447 47.619 0.00 0.00 44.95 3.16
3551 7103 2.027561 TGACGACCTCGGAAATCCAATT 60.028 45.455 0.00 0.00 44.95 2.32
3552 7104 3.007635 GACGACCTCGGAAATCCAATTT 58.992 45.455 0.00 0.00 44.95 1.82
3553 7105 4.186159 GACGACCTCGGAAATCCAATTTA 58.814 43.478 0.00 0.00 44.95 1.40
3554 7106 4.189231 ACGACCTCGGAAATCCAATTTAG 58.811 43.478 0.00 0.00 44.95 1.85
3555 7107 3.560068 CGACCTCGGAAATCCAATTTAGG 59.440 47.826 0.00 1.16 33.64 2.69
3556 7108 4.682320 CGACCTCGGAAATCCAATTTAGGA 60.682 45.833 0.00 0.00 37.66 2.94
3557 7109 5.187621 ACCTCGGAAATCCAATTTAGGAA 57.812 39.130 0.00 0.00 41.92 3.36
3558 7110 5.576128 ACCTCGGAAATCCAATTTAGGAAA 58.424 37.500 0.00 0.00 41.92 3.13
3559 7111 5.652452 ACCTCGGAAATCCAATTTAGGAAAG 59.348 40.000 0.00 0.00 41.92 2.62
3560 7112 5.450550 CCTCGGAAATCCAATTTAGGAAAGC 60.451 44.000 0.00 0.00 41.92 3.51
3561 7113 5.261216 TCGGAAATCCAATTTAGGAAAGCT 58.739 37.500 0.00 0.00 41.92 3.74
3562 7114 5.714806 TCGGAAATCCAATTTAGGAAAGCTT 59.285 36.000 0.00 0.00 41.92 3.74
3563 7115 6.887545 TCGGAAATCCAATTTAGGAAAGCTTA 59.112 34.615 0.00 0.00 41.92 3.09
3564 7116 7.394923 TCGGAAATCCAATTTAGGAAAGCTTAA 59.605 33.333 0.00 0.00 41.92 1.85
3565 7117 7.702348 CGGAAATCCAATTTAGGAAAGCTTAAG 59.298 37.037 0.00 0.00 41.92 1.85
3566 7118 8.531982 GGAAATCCAATTTAGGAAAGCTTAAGT 58.468 33.333 0.00 0.00 41.92 2.24
3578 7130 8.870075 AGGAAAGCTTAAGTATTTTGATCTGT 57.130 30.769 0.00 0.00 0.00 3.41
3579 7131 8.734386 AGGAAAGCTTAAGTATTTTGATCTGTG 58.266 33.333 0.00 0.00 0.00 3.66
3580 7132 7.486232 GGAAAGCTTAAGTATTTTGATCTGTGC 59.514 37.037 0.00 0.00 0.00 4.57
3581 7133 7.452880 AAGCTTAAGTATTTTGATCTGTGCA 57.547 32.000 0.00 0.00 0.00 4.57
3582 7134 7.452880 AGCTTAAGTATTTTGATCTGTGCAA 57.547 32.000 4.02 0.00 0.00 4.08
3583 7135 7.885297 AGCTTAAGTATTTTGATCTGTGCAAA 58.115 30.769 4.02 0.00 33.76 3.68
3584 7136 8.359642 AGCTTAAGTATTTTGATCTGTGCAAAA 58.640 29.630 4.02 0.00 45.79 2.44
3585 7137 8.977505 GCTTAAGTATTTTGATCTGTGCAAAAA 58.022 29.630 4.02 0.00 45.14 1.94
3607 7159 6.606965 AAAAAGAAAAACAAGTCGAACGAC 57.393 33.333 17.79 17.79 44.86 4.34
3608 7160 4.932268 AAGAAAAACAAGTCGAACGACA 57.068 36.364 25.13 0.00 46.76 4.35
3609 7161 4.932268 AGAAAAACAAGTCGAACGACAA 57.068 36.364 25.13 0.00 46.76 3.18
3610 7162 5.285798 AGAAAAACAAGTCGAACGACAAA 57.714 34.783 25.13 0.00 46.76 2.83
3611 7163 5.875930 AGAAAAACAAGTCGAACGACAAAT 58.124 33.333 25.13 11.11 46.76 2.32
3612 7164 5.737290 AGAAAAACAAGTCGAACGACAAATG 59.263 36.000 25.13 21.32 46.76 2.32
3613 7165 4.609691 AAACAAGTCGAACGACAAATGT 57.390 36.364 25.13 21.82 46.76 2.71
3614 7166 4.609691 AACAAGTCGAACGACAAATGTT 57.390 36.364 25.13 24.96 46.76 2.71
3615 7167 5.721876 AACAAGTCGAACGACAAATGTTA 57.278 34.783 26.95 0.00 46.76 2.41
3616 7168 5.074430 ACAAGTCGAACGACAAATGTTAC 57.926 39.130 25.13 0.29 46.76 2.50
3617 7169 4.025480 ACAAGTCGAACGACAAATGTTACC 60.025 41.667 25.13 0.00 46.76 2.85
3618 7170 3.986277 AGTCGAACGACAAATGTTACCT 58.014 40.909 25.13 2.09 46.76 3.08
3619 7171 3.985925 AGTCGAACGACAAATGTTACCTC 59.014 43.478 25.13 0.00 46.76 3.85
3620 7172 3.122445 GTCGAACGACAAATGTTACCTCC 59.878 47.826 20.00 0.00 44.02 4.30
3621 7173 3.061322 CGAACGACAAATGTTACCTCCA 58.939 45.455 0.00 0.00 0.00 3.86
3622 7174 3.495377 CGAACGACAAATGTTACCTCCAA 59.505 43.478 0.00 0.00 0.00 3.53
3623 7175 4.024725 CGAACGACAAATGTTACCTCCAAA 60.025 41.667 0.00 0.00 0.00 3.28
3624 7176 5.334569 CGAACGACAAATGTTACCTCCAAAT 60.335 40.000 0.00 0.00 0.00 2.32
3625 7177 5.371115 ACGACAAATGTTACCTCCAAATG 57.629 39.130 0.00 0.00 0.00 2.32
3626 7178 4.825085 ACGACAAATGTTACCTCCAAATGT 59.175 37.500 0.00 0.00 0.00 2.71
3627 7179 5.300792 ACGACAAATGTTACCTCCAAATGTT 59.699 36.000 0.00 0.00 0.00 2.71
3628 7180 6.487331 ACGACAAATGTTACCTCCAAATGTTA 59.513 34.615 0.00 0.00 0.00 2.41
3629 7181 7.013464 ACGACAAATGTTACCTCCAAATGTTAA 59.987 33.333 0.00 0.00 0.00 2.01
3630 7182 7.325097 CGACAAATGTTACCTCCAAATGTTAAC 59.675 37.037 0.00 0.00 0.00 2.01
3631 7183 8.012957 ACAAATGTTACCTCCAAATGTTAACA 57.987 30.769 11.41 11.41 0.00 2.41
3632 7184 7.923878 ACAAATGTTACCTCCAAATGTTAACAC 59.076 33.333 11.22 0.00 0.00 3.32
3633 7185 6.584185 ATGTTACCTCCAAATGTTAACACC 57.416 37.500 11.22 0.00 0.00 4.16
3634 7186 5.697067 TGTTACCTCCAAATGTTAACACCT 58.303 37.500 11.22 0.00 0.00 4.00
3635 7187 6.839454 TGTTACCTCCAAATGTTAACACCTA 58.161 36.000 11.22 0.00 0.00 3.08
3636 7188 7.463431 TGTTACCTCCAAATGTTAACACCTAT 58.537 34.615 11.22 0.00 0.00 2.57
3637 7189 7.945664 TGTTACCTCCAAATGTTAACACCTATT 59.054 33.333 11.22 0.00 0.00 1.73
3638 7190 8.799367 GTTACCTCCAAATGTTAACACCTATTT 58.201 33.333 11.22 4.76 0.00 1.40
3639 7191 7.849322 ACCTCCAAATGTTAACACCTATTTT 57.151 32.000 11.22 4.37 0.00 1.82
3640 7192 8.257602 ACCTCCAAATGTTAACACCTATTTTT 57.742 30.769 11.22 3.62 0.00 1.94
3641 7193 9.369672 ACCTCCAAATGTTAACACCTATTTTTA 57.630 29.630 11.22 0.00 0.00 1.52
3662 7214 1.588674 TTTTTCACCGACGATGCACT 58.411 45.000 0.00 0.00 0.00 4.40
3663 7215 1.588674 TTTTCACCGACGATGCACTT 58.411 45.000 0.00 0.00 0.00 3.16
3664 7216 1.588674 TTTCACCGACGATGCACTTT 58.411 45.000 0.00 0.00 0.00 2.66
3665 7217 1.588674 TTCACCGACGATGCACTTTT 58.411 45.000 0.00 0.00 0.00 2.27
3666 7218 1.144969 TCACCGACGATGCACTTTTC 58.855 50.000 0.00 0.00 0.00 2.29
3667 7219 0.865111 CACCGACGATGCACTTTTCA 59.135 50.000 0.00 0.00 0.00 2.69
3668 7220 1.464608 CACCGACGATGCACTTTTCAT 59.535 47.619 0.00 0.00 0.00 2.57
3669 7221 1.464608 ACCGACGATGCACTTTTCATG 59.535 47.619 0.00 0.00 0.00 3.07
3670 7222 1.464608 CCGACGATGCACTTTTCATGT 59.535 47.619 0.00 0.00 0.00 3.21
3671 7223 2.498905 CGACGATGCACTTTTCATGTG 58.501 47.619 0.00 0.00 38.36 3.21
3672 7224 2.157474 CGACGATGCACTTTTCATGTGA 59.843 45.455 0.00 0.00 37.60 3.58
3673 7225 3.363871 CGACGATGCACTTTTCATGTGAA 60.364 43.478 0.00 0.00 37.60 3.18
3674 7226 4.536065 GACGATGCACTTTTCATGTGAAA 58.464 39.130 4.16 4.16 41.77 2.69
3686 7238 7.606858 TTTTCATGTGAAAATTGTCAAGCAA 57.393 28.000 14.95 0.00 45.76 3.91
3687 7239 6.831727 TTCATGTGAAAATTGTCAAGCAAG 57.168 33.333 0.00 0.00 40.86 4.01
3688 7240 4.746115 TCATGTGAAAATTGTCAAGCAAGC 59.254 37.500 0.00 0.00 40.86 4.01
3689 7241 4.389890 TGTGAAAATTGTCAAGCAAGCT 57.610 36.364 0.00 0.00 40.86 3.74
3690 7242 4.757594 TGTGAAAATTGTCAAGCAAGCTT 58.242 34.783 0.00 0.59 40.86 3.74
3702 7254 5.168526 CAAGCAAGCTTGTTACACTAACA 57.831 39.130 26.55 0.00 45.91 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.873719 TTTCAATCTGTTCCTCAACAAGTTA 57.126 32.000 0.00 0.00 42.13 2.24
9 10 5.712152 ACCATTTCAATCTGTTCCTCAAC 57.288 39.130 0.00 0.00 0.00 3.18
102 103 4.202274 TGGAAGTTCTGTAACCGACAATCA 60.202 41.667 2.25 0.00 37.70 2.57
103 104 4.312443 TGGAAGTTCTGTAACCGACAATC 58.688 43.478 2.25 0.00 37.70 2.67
104 105 4.345859 TGGAAGTTCTGTAACCGACAAT 57.654 40.909 2.25 0.00 37.70 2.71
105 106 3.823281 TGGAAGTTCTGTAACCGACAA 57.177 42.857 2.25 0.00 37.70 3.18
106 107 3.322541 TCATGGAAGTTCTGTAACCGACA 59.677 43.478 2.25 0.00 36.15 4.35
107 108 3.921677 TCATGGAAGTTCTGTAACCGAC 58.078 45.455 2.25 0.00 36.15 4.79
108 109 4.039973 AGTTCATGGAAGTTCTGTAACCGA 59.960 41.667 2.25 0.00 36.15 4.69
109 110 4.315803 AGTTCATGGAAGTTCTGTAACCG 58.684 43.478 2.25 0.00 36.15 4.44
260 261 4.271696 TCCAGGTGTGTTGAAGTATCAG 57.728 45.455 0.00 0.00 36.78 2.90
351 622 2.749621 GTCTTGTGATTCCCATGGTCAC 59.250 50.000 21.46 21.46 41.90 3.67
378 670 7.430502 GTGCATTGATAAGCTTTATGTTCTGTC 59.569 37.037 3.20 0.00 0.00 3.51
382 674 6.563422 TGGTGCATTGATAAGCTTTATGTTC 58.437 36.000 3.20 0.00 0.00 3.18
387 679 4.584325 GGGATGGTGCATTGATAAGCTTTA 59.416 41.667 3.20 0.00 0.00 1.85
392 684 3.319972 CCAAGGGATGGTGCATTGATAAG 59.680 47.826 0.00 0.00 44.85 1.73
393 685 3.298619 CCAAGGGATGGTGCATTGATAA 58.701 45.455 0.00 0.00 44.85 1.75
410 702 1.303317 CAACCCCGTCCCTTCCAAG 60.303 63.158 0.00 0.00 0.00 3.61
412 704 3.961414 GCAACCCCGTCCCTTCCA 61.961 66.667 0.00 0.00 0.00 3.53
414 706 2.046217 GAGCAACCCCGTCCCTTC 60.046 66.667 0.00 0.00 0.00 3.46
415 707 2.411765 CTTGAGCAACCCCGTCCCTT 62.412 60.000 0.00 0.00 0.00 3.95
417 709 2.359975 CTTGAGCAACCCCGTCCC 60.360 66.667 0.00 0.00 0.00 4.46
418 710 0.536460 TTTCTTGAGCAACCCCGTCC 60.536 55.000 0.00 0.00 0.00 4.79
421 713 0.875059 GAGTTTCTTGAGCAACCCCG 59.125 55.000 0.00 0.00 0.00 5.73
422 714 1.981256 TGAGTTTCTTGAGCAACCCC 58.019 50.000 0.00 0.00 0.00 4.95
423 715 2.294512 CCTTGAGTTTCTTGAGCAACCC 59.705 50.000 0.00 0.00 0.00 4.11
424 716 2.952310 ACCTTGAGTTTCTTGAGCAACC 59.048 45.455 0.00 0.00 0.00 3.77
425 717 4.574828 TGTACCTTGAGTTTCTTGAGCAAC 59.425 41.667 0.00 0.00 0.00 4.17
426 718 4.776349 TGTACCTTGAGTTTCTTGAGCAA 58.224 39.130 0.00 0.00 0.00 3.91
427 719 4.415881 TGTACCTTGAGTTTCTTGAGCA 57.584 40.909 0.00 0.00 0.00 4.26
428 720 4.574828 TGTTGTACCTTGAGTTTCTTGAGC 59.425 41.667 0.00 0.00 0.00 4.26
429 721 5.277538 GCTGTTGTACCTTGAGTTTCTTGAG 60.278 44.000 0.00 0.00 0.00 3.02
430 722 4.574828 GCTGTTGTACCTTGAGTTTCTTGA 59.425 41.667 0.00 0.00 0.00 3.02
431 723 4.335315 TGCTGTTGTACCTTGAGTTTCTTG 59.665 41.667 0.00 0.00 0.00 3.02
432 724 4.523083 TGCTGTTGTACCTTGAGTTTCTT 58.477 39.130 0.00 0.00 0.00 2.52
433 725 4.150897 TGCTGTTGTACCTTGAGTTTCT 57.849 40.909 0.00 0.00 0.00 2.52
436 728 4.085357 TGATGCTGTTGTACCTTGAGTT 57.915 40.909 0.00 0.00 0.00 3.01
437 729 3.769739 TGATGCTGTTGTACCTTGAGT 57.230 42.857 0.00 0.00 0.00 3.41
438 730 4.275689 TGTTTGATGCTGTTGTACCTTGAG 59.724 41.667 0.00 0.00 0.00 3.02
439 731 4.203226 TGTTTGATGCTGTTGTACCTTGA 58.797 39.130 0.00 0.00 0.00 3.02
440 732 4.566545 TGTTTGATGCTGTTGTACCTTG 57.433 40.909 0.00 0.00 0.00 3.61
441 733 5.301551 TGAATGTTTGATGCTGTTGTACCTT 59.698 36.000 0.00 0.00 0.00 3.50
442 734 4.826733 TGAATGTTTGATGCTGTTGTACCT 59.173 37.500 0.00 0.00 0.00 3.08
443 735 5.119931 TGAATGTTTGATGCTGTTGTACC 57.880 39.130 0.00 0.00 0.00 3.34
444 736 7.642071 AATTGAATGTTTGATGCTGTTGTAC 57.358 32.000 0.00 0.00 0.00 2.90
445 737 7.114670 CGAAATTGAATGTTTGATGCTGTTGTA 59.885 33.333 0.00 0.00 0.00 2.41
446 738 6.074195 CGAAATTGAATGTTTGATGCTGTTGT 60.074 34.615 0.00 0.00 0.00 3.32
447 739 6.074195 ACGAAATTGAATGTTTGATGCTGTTG 60.074 34.615 0.00 0.00 0.00 3.33
448 740 5.984926 ACGAAATTGAATGTTTGATGCTGTT 59.015 32.000 0.00 0.00 0.00 3.16
449 741 5.531634 ACGAAATTGAATGTTTGATGCTGT 58.468 33.333 0.00 0.00 0.00 4.40
450 742 6.456447 AACGAAATTGAATGTTTGATGCTG 57.544 33.333 0.00 0.00 0.00 4.41
451 743 7.481275 AAAACGAAATTGAATGTTTGATGCT 57.519 28.000 0.00 0.00 34.96 3.79
452 744 9.464248 GATAAAACGAAATTGAATGTTTGATGC 57.536 29.630 0.00 0.00 34.96 3.91
453 745 9.660825 CGATAAAACGAAATTGAATGTTTGATG 57.339 29.630 0.00 0.00 34.96 3.07
463 755 4.093703 ACGATGCCGATAAAACGAAATTGA 59.906 37.500 0.00 0.00 39.50 2.57
470 762 1.332028 GCTCACGATGCCGATAAAACG 60.332 52.381 0.00 0.00 39.50 3.60
472 764 1.295792 GGCTCACGATGCCGATAAAA 58.704 50.000 0.00 0.00 41.03 1.52
507 799 2.584492 GCCAAGCCATGTTATCCAAC 57.416 50.000 0.00 0.00 35.06 3.77
563 856 5.508567 TCCATGATCATTAACACACCATGT 58.491 37.500 5.16 0.00 46.42 3.21
564 857 6.453926 TTCCATGATCATTAACACACCATG 57.546 37.500 5.16 0.00 0.00 3.66
566 859 4.949238 CCTTCCATGATCATTAACACACCA 59.051 41.667 5.16 0.00 0.00 4.17
567 860 4.949856 ACCTTCCATGATCATTAACACACC 59.050 41.667 5.16 0.00 0.00 4.16
568 861 6.150976 TCAACCTTCCATGATCATTAACACAC 59.849 38.462 5.16 0.00 0.00 3.82
570 863 6.757897 TCAACCTTCCATGATCATTAACAC 57.242 37.500 5.16 0.00 0.00 3.32
575 868 6.070424 AGCAAAATCAACCTTCCATGATCATT 60.070 34.615 5.16 0.00 35.29 2.57
576 869 5.424252 AGCAAAATCAACCTTCCATGATCAT 59.576 36.000 1.18 1.18 35.29 2.45
578 871 5.107133 CAGCAAAATCAACCTTCCATGATC 58.893 41.667 0.00 0.00 35.29 2.92
580 873 3.896888 ACAGCAAAATCAACCTTCCATGA 59.103 39.130 0.00 0.00 0.00 3.07
1793 4221 4.363138 CTTCACCTTTCCTTCTTTGCAAC 58.637 43.478 0.00 0.00 0.00 4.17
1818 4246 3.684305 TGAAGTCAAACATATCCTGTGCG 59.316 43.478 0.00 0.00 38.39 5.34
1857 4285 3.386402 TGTACATAATCACATCAGGCCGA 59.614 43.478 0.00 0.00 0.00 5.54
1993 4422 8.695456 CCTTCCAATTTTACAGTAGCCATTAAT 58.305 33.333 0.00 0.00 0.00 1.40
2024 4453 1.611977 TGACAAGACTCAATCCGTCGT 59.388 47.619 0.00 0.00 34.40 4.34
2028 4457 1.550524 TCCCTGACAAGACTCAATCCG 59.449 52.381 0.00 0.00 0.00 4.18
2041 4470 3.503748 CCACTGAGTGAAATTTCCCTGAC 59.496 47.826 15.33 6.97 35.23 3.51
2052 4481 1.073284 GGCTTAACCCCACTGAGTGAA 59.927 52.381 15.33 0.00 35.23 3.18
2153 4902 4.858850 TGGTATGCCACTTTCATTCATCT 58.141 39.130 0.00 0.00 40.46 2.90
2187 4936 8.594550 AGTCCACTAAGAACTATGTTGTATGTT 58.405 33.333 0.00 0.00 0.00 2.71
2269 5018 8.440059 TGTTATGACATTAATCTTCACGTTCAC 58.560 33.333 0.00 0.00 0.00 3.18
2308 5202 8.349983 TCTCCTAGTTTTAAACATTGCAGAAAC 58.650 33.333 10.60 0.00 0.00 2.78
2360 5677 5.133660 ACCAACCCAATGGCTGATATAGTAA 59.866 40.000 0.00 0.00 44.75 2.24
2442 5759 5.591067 TGAAAACATATCATCAGCATCTGCA 59.409 36.000 4.79 0.00 45.16 4.41
2492 5809 4.623932 TGATTTAGCAGTCTGGAGTTGT 57.376 40.909 1.14 0.00 0.00 3.32
2571 5888 5.006844 TGACAGCTGTTTTGCATCAAATTTG 59.993 36.000 22.65 12.15 33.19 2.32
2575 5892 3.130869 ACTGACAGCTGTTTTGCATCAAA 59.869 39.130 22.65 0.00 32.56 2.69
2781 6099 3.472726 GGCATGTGGGGGCAATGG 61.473 66.667 0.00 0.00 0.00 3.16
2812 6132 8.623903 GCAACAACAGAATGGATGATTTATCTA 58.376 33.333 0.00 0.00 43.62 1.98
2819 6139 3.446161 CAGGCAACAACAGAATGGATGAT 59.554 43.478 0.00 0.00 39.73 2.45
2865 6206 4.072131 TCAGGCCACAGTCTTGTTATTTC 58.928 43.478 5.01 0.00 34.62 2.17
2876 6225 2.238084 TATGACTCTCAGGCCACAGT 57.762 50.000 5.01 0.00 0.00 3.55
2912 6261 0.960364 TTGCGCCTTCTTCATCCCAC 60.960 55.000 4.18 0.00 0.00 4.61
2915 6264 0.729690 GAGTTGCGCCTTCTTCATCC 59.270 55.000 4.18 0.00 0.00 3.51
3118 6483 7.222872 AGAGAGGCATTACTGGAAAATATCAG 58.777 38.462 0.00 0.00 37.07 2.90
3204 6577 1.568504 AGCCCTCAAGTAACATCGGA 58.431 50.000 0.00 0.00 0.00 4.55
3205 6578 3.753294 ATAGCCCTCAAGTAACATCGG 57.247 47.619 0.00 0.00 0.00 4.18
3206 6579 5.177696 GCTTAATAGCCCTCAAGTAACATCG 59.822 44.000 0.00 0.00 41.74 3.84
3251 6778 6.471146 AGAGATTGCAGTGAATTCTTACAGT 58.529 36.000 7.05 0.00 0.00 3.55
3252 6779 6.036953 GGAGAGATTGCAGTGAATTCTTACAG 59.963 42.308 7.05 0.00 0.00 2.74
3309 6851 3.776340 TGGAACAGAAAAAGGAAAACGC 58.224 40.909 0.00 0.00 0.00 4.84
3353 6898 3.262660 ACTGATCCTTGATGCTCTGTTCA 59.737 43.478 0.00 0.00 0.00 3.18
3383 6928 0.615331 GAGATGAGACCCCAACAGCA 59.385 55.000 0.00 0.00 0.00 4.41
3386 6931 2.325661 TCAGAGATGAGACCCCAACA 57.674 50.000 0.00 0.00 0.00 3.33
3388 6933 2.978978 TGTTTCAGAGATGAGACCCCAA 59.021 45.455 0.00 0.00 0.00 4.12
3446 6998 3.510388 TCTAACTCCGCACTCATCAAG 57.490 47.619 0.00 0.00 0.00 3.02
3447 6999 3.509967 TCTTCTAACTCCGCACTCATCAA 59.490 43.478 0.00 0.00 0.00 2.57
3449 7001 3.701241 CTCTTCTAACTCCGCACTCATC 58.299 50.000 0.00 0.00 0.00 2.92
3450 7002 2.159170 GCTCTTCTAACTCCGCACTCAT 60.159 50.000 0.00 0.00 0.00 2.90
3452 7004 1.202582 TGCTCTTCTAACTCCGCACTC 59.797 52.381 0.00 0.00 0.00 3.51
3453 7005 1.203523 CTGCTCTTCTAACTCCGCACT 59.796 52.381 0.00 0.00 0.00 4.40
3455 7007 0.108615 GCTGCTCTTCTAACTCCGCA 60.109 55.000 0.00 0.00 0.00 5.69
3456 7008 0.108615 TGCTGCTCTTCTAACTCCGC 60.109 55.000 0.00 0.00 0.00 5.54
3457 7009 2.266554 CTTGCTGCTCTTCTAACTCCG 58.733 52.381 0.00 0.00 0.00 4.63
3458 7010 2.626840 CCTTGCTGCTCTTCTAACTCC 58.373 52.381 0.00 0.00 0.00 3.85
3459 7011 2.234908 TCCCTTGCTGCTCTTCTAACTC 59.765 50.000 0.00 0.00 0.00 3.01
3460 7012 2.260822 TCCCTTGCTGCTCTTCTAACT 58.739 47.619 0.00 0.00 0.00 2.24
3461 7013 2.770164 TCCCTTGCTGCTCTTCTAAC 57.230 50.000 0.00 0.00 0.00 2.34
3462 7014 3.788227 TTTCCCTTGCTGCTCTTCTAA 57.212 42.857 0.00 0.00 0.00 2.10
3463 7015 3.264193 TCATTTCCCTTGCTGCTCTTCTA 59.736 43.478 0.00 0.00 0.00 2.10
3464 7016 2.040813 TCATTTCCCTTGCTGCTCTTCT 59.959 45.455 0.00 0.00 0.00 2.85
3465 7017 2.422832 CTCATTTCCCTTGCTGCTCTTC 59.577 50.000 0.00 0.00 0.00 2.87
3466 7018 2.040813 TCTCATTTCCCTTGCTGCTCTT 59.959 45.455 0.00 0.00 0.00 2.85
3467 7019 1.632409 TCTCATTTCCCTTGCTGCTCT 59.368 47.619 0.00 0.00 0.00 4.09
3468 7020 2.119801 TCTCATTTCCCTTGCTGCTC 57.880 50.000 0.00 0.00 0.00 4.26
3469 7021 2.376109 CATCTCATTTCCCTTGCTGCT 58.624 47.619 0.00 0.00 0.00 4.24
3470 7022 1.202382 GCATCTCATTTCCCTTGCTGC 60.202 52.381 0.00 0.00 0.00 5.25
3471 7023 2.376109 AGCATCTCATTTCCCTTGCTG 58.624 47.619 0.00 0.00 38.87 4.41
3472 7024 2.758979 CAAGCATCTCATTTCCCTTGCT 59.241 45.455 0.00 0.00 41.87 3.91
3473 7025 2.737679 GCAAGCATCTCATTTCCCTTGC 60.738 50.000 7.31 7.31 45.29 4.01
3474 7026 2.758979 AGCAAGCATCTCATTTCCCTTG 59.241 45.455 0.00 0.00 34.40 3.61
3475 7027 3.022406 GAGCAAGCATCTCATTTCCCTT 58.978 45.455 0.00 0.00 0.00 3.95
3476 7028 2.652590 GAGCAAGCATCTCATTTCCCT 58.347 47.619 0.00 0.00 0.00 4.20
3477 7029 1.332997 CGAGCAAGCATCTCATTTCCC 59.667 52.381 0.00 0.00 0.00 3.97
3478 7030 2.012673 ACGAGCAAGCATCTCATTTCC 58.987 47.619 0.00 0.00 0.00 3.13
3479 7031 2.031437 GGACGAGCAAGCATCTCATTTC 59.969 50.000 0.00 0.00 0.00 2.17
3480 7032 2.012673 GGACGAGCAAGCATCTCATTT 58.987 47.619 0.00 0.00 0.00 2.32
3481 7033 1.065926 TGGACGAGCAAGCATCTCATT 60.066 47.619 0.00 0.00 0.00 2.57
3482 7034 0.538584 TGGACGAGCAAGCATCTCAT 59.461 50.000 0.00 0.00 0.00 2.90
3483 7035 0.390340 GTGGACGAGCAAGCATCTCA 60.390 55.000 0.00 0.00 0.00 3.27
3484 7036 1.416813 CGTGGACGAGCAAGCATCTC 61.417 60.000 0.00 0.00 43.02 2.75
3485 7037 1.446792 CGTGGACGAGCAAGCATCT 60.447 57.895 0.00 0.00 43.02 2.90
3486 7038 3.084579 CGTGGACGAGCAAGCATC 58.915 61.111 0.00 0.00 43.02 3.91
3487 7039 3.121030 GCGTGGACGAGCAAGCAT 61.121 61.111 2.73 0.00 43.02 3.79
3517 7069 2.948979 AGGTCGTCAGTCAATGCAAAAA 59.051 40.909 0.00 0.00 0.00 1.94
3518 7070 2.548057 GAGGTCGTCAGTCAATGCAAAA 59.452 45.455 0.00 0.00 0.00 2.44
3519 7071 2.143122 GAGGTCGTCAGTCAATGCAAA 58.857 47.619 0.00 0.00 0.00 3.68
3520 7072 1.795768 GAGGTCGTCAGTCAATGCAA 58.204 50.000 0.00 0.00 0.00 4.08
3521 7073 0.388520 CGAGGTCGTCAGTCAATGCA 60.389 55.000 0.00 0.00 34.11 3.96
3522 7074 1.078759 CCGAGGTCGTCAGTCAATGC 61.079 60.000 0.00 0.00 37.74 3.56
3523 7075 0.526211 TCCGAGGTCGTCAGTCAATG 59.474 55.000 0.00 0.00 37.74 2.82
3524 7076 1.254026 TTCCGAGGTCGTCAGTCAAT 58.746 50.000 0.00 0.00 37.74 2.57
3525 7077 1.034356 TTTCCGAGGTCGTCAGTCAA 58.966 50.000 0.00 0.00 37.74 3.18
3526 7078 1.201647 GATTTCCGAGGTCGTCAGTCA 59.798 52.381 0.00 0.00 37.74 3.41
3527 7079 1.469423 GGATTTCCGAGGTCGTCAGTC 60.469 57.143 0.00 0.00 37.74 3.51
3528 7080 0.531200 GGATTTCCGAGGTCGTCAGT 59.469 55.000 0.00 0.00 37.74 3.41
3529 7081 0.530744 TGGATTTCCGAGGTCGTCAG 59.469 55.000 0.00 0.00 39.43 3.51
3530 7082 0.970640 TTGGATTTCCGAGGTCGTCA 59.029 50.000 0.00 0.00 39.43 4.35
3531 7083 2.311124 ATTGGATTTCCGAGGTCGTC 57.689 50.000 0.00 0.00 39.43 4.20
3532 7084 2.781681 AATTGGATTTCCGAGGTCGT 57.218 45.000 0.00 0.00 39.43 4.34
3533 7085 3.560068 CCTAAATTGGATTTCCGAGGTCG 59.440 47.826 0.00 0.00 39.43 4.79
3534 7086 4.777463 TCCTAAATTGGATTTCCGAGGTC 58.223 43.478 0.00 0.00 39.43 3.85
3535 7087 4.855298 TCCTAAATTGGATTTCCGAGGT 57.145 40.909 0.00 0.00 39.43 3.85
3536 7088 5.450550 GCTTTCCTAAATTGGATTTCCGAGG 60.451 44.000 0.00 0.00 39.43 4.63
3537 7089 5.358160 AGCTTTCCTAAATTGGATTTCCGAG 59.642 40.000 0.00 0.00 39.43 4.63
3538 7090 5.261216 AGCTTTCCTAAATTGGATTTCCGA 58.739 37.500 0.00 0.00 39.43 4.55
3539 7091 5.582689 AGCTTTCCTAAATTGGATTTCCG 57.417 39.130 0.00 0.00 39.43 4.30
3540 7092 8.531982 ACTTAAGCTTTCCTAAATTGGATTTCC 58.468 33.333 3.20 0.00 35.83 3.13
3552 7104 9.959721 ACAGATCAAAATACTTAAGCTTTCCTA 57.040 29.630 3.20 0.00 0.00 2.94
3553 7105 8.734386 CACAGATCAAAATACTTAAGCTTTCCT 58.266 33.333 3.20 0.00 0.00 3.36
3554 7106 7.486232 GCACAGATCAAAATACTTAAGCTTTCC 59.514 37.037 3.20 0.00 0.00 3.13
3555 7107 8.023128 TGCACAGATCAAAATACTTAAGCTTTC 58.977 33.333 3.20 0.00 0.00 2.62
3556 7108 7.885297 TGCACAGATCAAAATACTTAAGCTTT 58.115 30.769 3.20 0.05 0.00 3.51
3557 7109 7.452880 TGCACAGATCAAAATACTTAAGCTT 57.547 32.000 3.48 3.48 0.00 3.74
3558 7110 7.452880 TTGCACAGATCAAAATACTTAAGCT 57.547 32.000 1.29 0.00 0.00 3.74
3559 7111 8.519492 TTTTGCACAGATCAAAATACTTAAGC 57.481 30.769 1.29 0.00 38.17 3.09
3584 7136 6.144175 TGTCGTTCGACTTGTTTTTCTTTTT 58.856 32.000 22.49 0.00 36.23 1.94
3585 7137 5.691815 TGTCGTTCGACTTGTTTTTCTTTT 58.308 33.333 22.49 0.00 36.23 2.27
3586 7138 5.285798 TGTCGTTCGACTTGTTTTTCTTT 57.714 34.783 22.49 0.00 36.23 2.52
3587 7139 4.932268 TGTCGTTCGACTTGTTTTTCTT 57.068 36.364 22.49 0.00 36.23 2.52
3588 7140 4.932268 TTGTCGTTCGACTTGTTTTTCT 57.068 36.364 22.49 0.00 36.23 2.52
3589 7141 5.510323 ACATTTGTCGTTCGACTTGTTTTTC 59.490 36.000 22.49 0.00 36.23 2.29
3590 7142 5.395642 ACATTTGTCGTTCGACTTGTTTTT 58.604 33.333 22.49 2.85 36.23 1.94
3591 7143 4.976987 ACATTTGTCGTTCGACTTGTTTT 58.023 34.783 22.49 4.19 36.23 2.43
3592 7144 4.609691 ACATTTGTCGTTCGACTTGTTT 57.390 36.364 22.49 5.52 36.23 2.83
3593 7145 4.609691 AACATTTGTCGTTCGACTTGTT 57.390 36.364 22.49 22.36 36.23 2.83
3594 7146 4.025480 GGTAACATTTGTCGTTCGACTTGT 60.025 41.667 22.49 19.09 36.23 3.16
3595 7147 4.210537 AGGTAACATTTGTCGTTCGACTTG 59.789 41.667 22.49 18.60 41.41 3.16
3596 7148 4.374399 AGGTAACATTTGTCGTTCGACTT 58.626 39.130 22.49 12.53 41.41 3.01
3597 7149 3.985925 GAGGTAACATTTGTCGTTCGACT 59.014 43.478 22.49 7.20 41.41 4.18
3598 7150 3.122445 GGAGGTAACATTTGTCGTTCGAC 59.878 47.826 16.85 16.85 41.41 4.20
3599 7151 3.243805 TGGAGGTAACATTTGTCGTTCGA 60.244 43.478 0.00 0.00 41.41 3.71
3600 7152 3.061322 TGGAGGTAACATTTGTCGTTCG 58.939 45.455 0.00 0.00 41.41 3.95
3601 7153 5.427036 TTTGGAGGTAACATTTGTCGTTC 57.573 39.130 0.00 0.00 41.41 3.95
3602 7154 5.300792 ACATTTGGAGGTAACATTTGTCGTT 59.699 36.000 0.00 0.00 41.41 3.85
3603 7155 4.825085 ACATTTGGAGGTAACATTTGTCGT 59.175 37.500 0.00 0.00 41.41 4.34
3604 7156 5.371115 ACATTTGGAGGTAACATTTGTCG 57.629 39.130 0.00 0.00 41.41 4.35
3605 7157 8.138712 TGTTAACATTTGGAGGTAACATTTGTC 58.861 33.333 3.59 0.00 41.41 3.18
3606 7158 7.923878 GTGTTAACATTTGGAGGTAACATTTGT 59.076 33.333 12.26 0.00 41.41 2.83
3607 7159 7.383843 GGTGTTAACATTTGGAGGTAACATTTG 59.616 37.037 12.26 0.00 41.41 2.32
3608 7160 7.289084 AGGTGTTAACATTTGGAGGTAACATTT 59.711 33.333 12.26 0.00 41.41 2.32
3609 7161 6.780522 AGGTGTTAACATTTGGAGGTAACATT 59.219 34.615 12.26 0.00 41.41 2.71
3610 7162 6.311735 AGGTGTTAACATTTGGAGGTAACAT 58.688 36.000 12.26 0.00 41.41 2.71
3611 7163 5.697067 AGGTGTTAACATTTGGAGGTAACA 58.303 37.500 12.26 0.09 41.41 2.41
3612 7164 7.933215 ATAGGTGTTAACATTTGGAGGTAAC 57.067 36.000 12.26 0.00 0.00 2.50
3613 7165 8.943594 AAATAGGTGTTAACATTTGGAGGTAA 57.056 30.769 12.26 0.00 0.00 2.85
3614 7166 8.943594 AAAATAGGTGTTAACATTTGGAGGTA 57.056 30.769 12.26 0.00 0.00 3.08
3615 7167 7.849322 AAAATAGGTGTTAACATTTGGAGGT 57.151 32.000 12.26 0.00 0.00 3.85
3643 7195 1.588674 AGTGCATCGTCGGTGAAAAA 58.411 45.000 10.33 0.00 0.00 1.94
3644 7196 1.588674 AAGTGCATCGTCGGTGAAAA 58.411 45.000 10.33 0.00 0.00 2.29
3645 7197 1.588674 AAAGTGCATCGTCGGTGAAA 58.411 45.000 10.33 0.00 0.00 2.69
3646 7198 1.529438 GAAAAGTGCATCGTCGGTGAA 59.471 47.619 10.33 0.00 0.00 3.18
3647 7199 1.144969 GAAAAGTGCATCGTCGGTGA 58.855 50.000 10.33 0.00 0.00 4.02
3648 7200 0.865111 TGAAAAGTGCATCGTCGGTG 59.135 50.000 0.00 0.00 0.00 4.94
3649 7201 1.464608 CATGAAAAGTGCATCGTCGGT 59.535 47.619 0.00 0.00 0.00 4.69
3650 7202 1.464608 ACATGAAAAGTGCATCGTCGG 59.535 47.619 0.00 0.00 0.00 4.79
3651 7203 2.157474 TCACATGAAAAGTGCATCGTCG 59.843 45.455 0.00 0.00 36.93 5.12
3652 7204 3.811722 TCACATGAAAAGTGCATCGTC 57.188 42.857 0.00 0.00 36.93 4.20
3653 7205 4.566545 TTTCACATGAAAAGTGCATCGT 57.433 36.364 0.00 0.00 40.68 3.73
3663 7215 6.238157 GCTTGCTTGACAATTTTCACATGAAA 60.238 34.615 0.00 2.89 38.43 2.69
3664 7216 5.234757 GCTTGCTTGACAATTTTCACATGAA 59.765 36.000 0.00 0.00 37.72 2.57
3665 7217 4.746115 GCTTGCTTGACAATTTTCACATGA 59.254 37.500 0.00 0.00 37.72 3.07
3666 7218 4.748102 AGCTTGCTTGACAATTTTCACATG 59.252 37.500 0.00 0.00 37.72 3.21
3667 7219 4.952460 AGCTTGCTTGACAATTTTCACAT 58.048 34.783 0.00 0.00 37.72 3.21
3668 7220 4.389890 AGCTTGCTTGACAATTTTCACA 57.610 36.364 0.00 0.00 37.72 3.58
3669 7221 4.567959 ACAAGCTTGCTTGACAATTTTCAC 59.432 37.500 33.32 0.00 37.72 3.18
3670 7222 4.757594 ACAAGCTTGCTTGACAATTTTCA 58.242 34.783 33.32 0.00 37.72 2.69
3671 7223 5.723492 AACAAGCTTGCTTGACAATTTTC 57.277 34.783 33.32 0.00 37.72 2.29
3672 7224 6.035975 GTGTAACAAGCTTGCTTGACAATTTT 59.964 34.615 33.32 21.02 35.23 1.82
3673 7225 5.519927 GTGTAACAAGCTTGCTTGACAATTT 59.480 36.000 33.32 21.58 35.23 1.82
3674 7226 5.043248 GTGTAACAAGCTTGCTTGACAATT 58.957 37.500 33.32 21.87 35.23 2.32
3675 7227 4.339247 AGTGTAACAAGCTTGCTTGACAAT 59.661 37.500 33.32 25.01 41.43 2.71
3676 7228 3.694072 AGTGTAACAAGCTTGCTTGACAA 59.306 39.130 33.32 18.75 41.43 3.18
3677 7229 3.278574 AGTGTAACAAGCTTGCTTGACA 58.721 40.909 33.32 25.81 41.43 3.58
3678 7230 3.971032 AGTGTAACAAGCTTGCTTGAC 57.029 42.857 33.32 24.01 41.43 3.18
3679 7231 4.878971 TGTTAGTGTAACAAGCTTGCTTGA 59.121 37.500 33.32 15.44 44.95 3.02
3680 7232 5.168526 TGTTAGTGTAACAAGCTTGCTTG 57.831 39.130 27.45 27.45 44.95 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.