Multiple sequence alignment - TraesCS2B01G557300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G557300 chr2B 100.000 4851 0 0 1 4851 751845284 751840434 0.000000e+00 8959.0
1 TraesCS2B01G557300 chr2B 89.299 785 66 14 4077 4849 751813773 751812995 0.000000e+00 968.0
2 TraesCS2B01G557300 chr2B 90.323 124 12 0 167 290 775646380 775646257 3.880000e-36 163.0
3 TraesCS2B01G557300 chr2B 84.416 77 9 3 2261 2334 602256456 602256380 6.730000e-09 73.1
4 TraesCS2B01G557300 chr2D 88.212 3843 260 106 307 4068 616638015 616634285 0.000000e+00 4409.0
5 TraesCS2B01G557300 chr2D 89.359 780 67 10 4079 4849 616633246 616632474 0.000000e+00 966.0
6 TraesCS2B01G557300 chr2A 93.245 2265 107 18 1817 4068 746853624 746851393 0.000000e+00 3293.0
7 TraesCS2B01G557300 chr2A 90.573 785 52 13 4077 4849 746850377 746849603 0.000000e+00 1020.0
8 TraesCS2B01G557300 chr2A 83.413 627 53 17 1207 1809 746855399 746854800 7.150000e-148 534.0
9 TraesCS2B01G557300 chr2A 84.394 487 27 22 642 1107 746855890 746855432 2.680000e-117 433.0
10 TraesCS2B01G557300 chr2A 92.157 51 4 0 2295 2345 535236363 535236313 6.730000e-09 73.1
11 TraesCS2B01G557300 chr3B 79.825 456 64 21 3043 3483 559341549 559341107 1.700000e-79 307.0
12 TraesCS2B01G557300 chr3B 93.939 165 9 1 8 171 9901147 9900983 1.040000e-61 248.0
13 TraesCS2B01G557300 chr3D 89.427 227 20 4 3259 3483 427816898 427816674 2.860000e-72 283.0
14 TraesCS2B01G557300 chr3D 93.373 166 9 1 8 173 85273908 85273745 1.350000e-60 244.0
15 TraesCS2B01G557300 chr3D 92.486 173 9 2 3 173 460456251 460456421 1.350000e-60 244.0
16 TraesCS2B01G557300 chr3A 89.732 224 19 4 3259 3480 557949756 557949977 2.860000e-72 283.0
17 TraesCS2B01G557300 chr3A 95.935 123 5 0 167 289 234996047 234996169 2.960000e-47 200.0
18 TraesCS2B01G557300 chr3A 92.308 52 4 0 2294 2345 638928961 638929012 1.870000e-09 75.0
19 TraesCS2B01G557300 chr1B 95.122 164 6 1 8 171 234123564 234123725 1.730000e-64 257.0
20 TraesCS2B01G557300 chr6D 95.122 164 4 3 8 171 161819250 161819409 6.230000e-64 255.0
21 TraesCS2B01G557300 chr6D 95.122 164 4 3 8 171 269134108 269133949 6.230000e-64 255.0
22 TraesCS2B01G557300 chr7B 93.902 164 10 0 8 171 446582495 446582658 1.040000e-61 248.0
23 TraesCS2B01G557300 chr7B 94.118 51 3 0 2295 2345 39542657 39542607 1.450000e-10 78.7
24 TraesCS2B01G557300 chr7B 94.118 51 3 0 2295 2345 711498742 711498692 1.450000e-10 78.7
25 TraesCS2B01G557300 chr5B 92.982 171 8 3 1 171 692789397 692789563 3.750000e-61 246.0
26 TraesCS2B01G557300 chr5B 86.957 161 17 4 3266 3424 562048322 562048480 1.390000e-40 178.0
27 TraesCS2B01G557300 chr7A 92.899 169 8 2 3 169 646771315 646771481 4.850000e-60 243.0
28 TraesCS2B01G557300 chr7A 92.000 50 4 0 2285 2334 700492831 700492880 2.420000e-08 71.3
29 TraesCS2B01G557300 chrUn 89.474 152 16 0 3268 3419 98211670 98211519 4.950000e-45 193.0
30 TraesCS2B01G557300 chrUn 90.323 124 12 0 167 290 178803963 178803840 3.880000e-36 163.0
31 TraesCS2B01G557300 chrUn 78.846 104 20 2 189 291 462106194 462106296 8.710000e-08 69.4
32 TraesCS2B01G557300 chr6B 89.474 152 16 0 3268 3419 107771882 107771731 4.950000e-45 193.0
33 TraesCS2B01G557300 chr6B 97.619 42 1 0 249 290 651421368 651421327 6.730000e-09 73.1
34 TraesCS2B01G557300 chr6A 89.474 152 16 0 3268 3419 53156894 53156743 4.950000e-45 193.0
35 TraesCS2B01G557300 chr5A 88.800 125 14 0 167 291 328928653 328928777 2.340000e-33 154.0
36 TraesCS2B01G557300 chr5A 92.593 54 4 0 533 586 31930713 31930766 1.450000e-10 78.7
37 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31592453 31592506 6.730000e-09 73.1
38 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31623437 31623490 6.730000e-09 73.1
39 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31741421 31741474 6.730000e-09 73.1
40 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31772331 31772384 6.730000e-09 73.1
41 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31830628 31830681 6.730000e-09 73.1
42 TraesCS2B01G557300 chr5A 90.741 54 5 0 533 586 31864556 31864609 6.730000e-09 73.1
43 TraesCS2B01G557300 chr5A 88.889 54 6 0 533 586 31657601 31657654 3.130000e-07 67.6
44 TraesCS2B01G557300 chr4A 94.118 51 3 0 2295 2345 6461866 6461916 1.450000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G557300 chr2B 751840434 751845284 4850 True 8959.0 8959 100.00000 1 4851 1 chr2B.!!$R3 4850
1 TraesCS2B01G557300 chr2B 751812995 751813773 778 True 968.0 968 89.29900 4077 4849 1 chr2B.!!$R2 772
2 TraesCS2B01G557300 chr2D 616632474 616638015 5541 True 2687.5 4409 88.78550 307 4849 2 chr2D.!!$R1 4542
3 TraesCS2B01G557300 chr2A 746849603 746855890 6287 True 1320.0 3293 87.90625 642 4849 4 chr2A.!!$R2 4207

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 43 0.033504 GTGTGTGTGTGTCCGAGGAT 59.966 55.0 0.0 0.0 0.00 3.24 F
265 266 0.034477 CAACGTTTAGCCCTCCCCAT 60.034 55.0 0.0 0.0 0.00 4.00 F
1165 1191 0.030705 CTCCCATCTCTCTCCCCCAA 60.031 60.0 0.0 0.0 0.00 4.12 F
2004 3282 0.321346 TGCAGAAGCTCATCACCGAA 59.679 50.0 0.0 0.0 42.74 4.30 F
2013 3291 0.980423 TCATCACCGAATCCACCACA 59.020 50.0 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1146 1172 0.030705 TTGGGGGAGAGAGATGGGAG 60.031 60.000 0.00 0.0 0.00 4.30 R
1696 1801 0.251916 ATTCCAGAATCGCCGGAACA 59.748 50.000 5.05 0.0 41.45 3.18 R
2886 4167 0.244450 CCGTGGAGTAGTTGGCGTTA 59.756 55.000 0.00 0.0 0.00 3.18 R
2890 4171 0.669625 GTGTCCGTGGAGTAGTTGGC 60.670 60.000 0.00 0.0 0.00 4.52 R
3861 5142 1.139734 CACATGCGACCGAGCTACT 59.860 57.895 0.00 0.0 38.13 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.364972 GAAGAGGGAGGGAGAGAGAG 57.635 60.000 0.00 0.00 0.00 3.20
20 21 1.850345 GAAGAGGGAGGGAGAGAGAGA 59.150 57.143 0.00 0.00 0.00 3.10
21 22 1.522900 AGAGGGAGGGAGAGAGAGAG 58.477 60.000 0.00 0.00 0.00 3.20
22 23 1.222567 GAGGGAGGGAGAGAGAGAGT 58.777 60.000 0.00 0.00 0.00 3.24
23 24 0.926293 AGGGAGGGAGAGAGAGAGTG 59.074 60.000 0.00 0.00 0.00 3.51
24 25 0.629058 GGGAGGGAGAGAGAGAGTGT 59.371 60.000 0.00 0.00 0.00 3.55
25 26 1.684869 GGGAGGGAGAGAGAGAGTGTG 60.685 61.905 0.00 0.00 0.00 3.82
26 27 1.005450 GGAGGGAGAGAGAGAGTGTGT 59.995 57.143 0.00 0.00 0.00 3.72
27 28 2.091541 GAGGGAGAGAGAGAGTGTGTG 58.908 57.143 0.00 0.00 0.00 3.82
28 29 1.427368 AGGGAGAGAGAGAGTGTGTGT 59.573 52.381 0.00 0.00 0.00 3.72
29 30 1.543802 GGGAGAGAGAGAGTGTGTGTG 59.456 57.143 0.00 0.00 0.00 3.82
30 31 2.235016 GGAGAGAGAGAGTGTGTGTGT 58.765 52.381 0.00 0.00 0.00 3.72
31 32 2.030363 GGAGAGAGAGAGTGTGTGTGTG 60.030 54.545 0.00 0.00 0.00 3.82
32 33 2.621055 GAGAGAGAGAGTGTGTGTGTGT 59.379 50.000 0.00 0.00 0.00 3.72
33 34 2.360483 AGAGAGAGAGTGTGTGTGTGTG 59.640 50.000 0.00 0.00 0.00 3.82
34 35 2.099921 GAGAGAGAGTGTGTGTGTGTGT 59.900 50.000 0.00 0.00 0.00 3.72
35 36 2.099921 AGAGAGAGTGTGTGTGTGTGTC 59.900 50.000 0.00 0.00 0.00 3.67
36 37 1.137086 AGAGAGTGTGTGTGTGTGTCC 59.863 52.381 0.00 0.00 0.00 4.02
37 38 0.179111 AGAGTGTGTGTGTGTGTCCG 60.179 55.000 0.00 0.00 0.00 4.79
38 39 0.179121 GAGTGTGTGTGTGTGTCCGA 60.179 55.000 0.00 0.00 0.00 4.55
39 40 0.179111 AGTGTGTGTGTGTGTCCGAG 60.179 55.000 0.00 0.00 0.00 4.63
40 41 1.142965 TGTGTGTGTGTGTCCGAGG 59.857 57.895 0.00 0.00 0.00 4.63
41 42 1.324005 TGTGTGTGTGTGTCCGAGGA 61.324 55.000 0.00 0.00 0.00 3.71
42 43 0.033504 GTGTGTGTGTGTCCGAGGAT 59.966 55.000 0.00 0.00 0.00 3.24
43 44 0.756294 TGTGTGTGTGTCCGAGGATT 59.244 50.000 0.00 0.00 0.00 3.01
44 45 1.140052 TGTGTGTGTGTCCGAGGATTT 59.860 47.619 0.00 0.00 0.00 2.17
45 46 1.531149 GTGTGTGTGTCCGAGGATTTG 59.469 52.381 0.00 0.00 0.00 2.32
46 47 1.414550 TGTGTGTGTCCGAGGATTTGA 59.585 47.619 0.00 0.00 0.00 2.69
47 48 2.038426 TGTGTGTGTCCGAGGATTTGAT 59.962 45.455 0.00 0.00 0.00 2.57
48 49 2.416547 GTGTGTGTCCGAGGATTTGATG 59.583 50.000 0.00 0.00 0.00 3.07
49 50 2.009774 GTGTGTCCGAGGATTTGATGG 58.990 52.381 0.00 0.00 0.00 3.51
50 51 1.628340 TGTGTCCGAGGATTTGATGGT 59.372 47.619 0.00 0.00 0.00 3.55
51 52 2.835156 TGTGTCCGAGGATTTGATGGTA 59.165 45.455 0.00 0.00 0.00 3.25
52 53 3.262151 TGTGTCCGAGGATTTGATGGTAA 59.738 43.478 0.00 0.00 0.00 2.85
53 54 4.258543 GTGTCCGAGGATTTGATGGTAAA 58.741 43.478 0.00 0.00 0.00 2.01
54 55 4.698304 GTGTCCGAGGATTTGATGGTAAAA 59.302 41.667 0.00 0.00 0.00 1.52
55 56 5.182380 GTGTCCGAGGATTTGATGGTAAAAA 59.818 40.000 0.00 0.00 0.00 1.94
71 72 2.793278 AAAAAGGTCGCCAATGTCAC 57.207 45.000 0.00 0.00 0.00 3.67
72 73 1.981256 AAAAGGTCGCCAATGTCACT 58.019 45.000 0.00 0.00 0.00 3.41
73 74 1.981256 AAAGGTCGCCAATGTCACTT 58.019 45.000 0.00 0.00 0.00 3.16
74 75 1.238439 AAGGTCGCCAATGTCACTTG 58.762 50.000 0.00 0.00 0.00 3.16
75 76 0.396435 AGGTCGCCAATGTCACTTGA 59.604 50.000 0.00 0.00 0.00 3.02
76 77 1.003580 AGGTCGCCAATGTCACTTGAT 59.996 47.619 0.00 0.00 0.00 2.57
77 78 2.236146 AGGTCGCCAATGTCACTTGATA 59.764 45.455 0.00 0.00 0.00 2.15
78 79 3.118261 AGGTCGCCAATGTCACTTGATAT 60.118 43.478 0.00 0.00 0.00 1.63
79 80 3.002656 GGTCGCCAATGTCACTTGATATG 59.997 47.826 0.00 0.00 0.00 1.78
80 81 3.623060 GTCGCCAATGTCACTTGATATGT 59.377 43.478 0.00 0.00 0.00 2.29
81 82 4.808895 GTCGCCAATGTCACTTGATATGTA 59.191 41.667 0.00 0.00 0.00 2.29
82 83 5.466728 GTCGCCAATGTCACTTGATATGTAT 59.533 40.000 0.00 0.00 0.00 2.29
83 84 5.466393 TCGCCAATGTCACTTGATATGTATG 59.534 40.000 0.00 0.00 0.00 2.39
84 85 5.466393 CGCCAATGTCACTTGATATGTATGA 59.534 40.000 0.00 0.00 0.00 2.15
85 86 6.347160 CGCCAATGTCACTTGATATGTATGAG 60.347 42.308 0.00 0.00 0.00 2.90
86 87 6.707608 GCCAATGTCACTTGATATGTATGAGA 59.292 38.462 0.00 0.00 0.00 3.27
87 88 7.227314 GCCAATGTCACTTGATATGTATGAGAA 59.773 37.037 0.00 0.00 0.00 2.87
88 89 9.281371 CCAATGTCACTTGATATGTATGAGAAT 57.719 33.333 0.00 0.00 0.00 2.40
142 143 5.977489 AACTCTTAAAGTTAATGTGGCCC 57.023 39.130 0.00 0.00 46.55 5.80
143 144 4.341487 ACTCTTAAAGTTAATGTGGCCCC 58.659 43.478 0.00 0.00 33.03 5.80
144 145 3.349022 TCTTAAAGTTAATGTGGCCCCG 58.651 45.455 0.00 0.00 0.00 5.73
145 146 2.883122 TAAAGTTAATGTGGCCCCGT 57.117 45.000 0.00 0.00 0.00 5.28
146 147 2.003937 AAAGTTAATGTGGCCCCGTT 57.996 45.000 0.00 0.00 0.00 4.44
147 148 1.253100 AAGTTAATGTGGCCCCGTTG 58.747 50.000 0.00 0.00 0.00 4.10
148 149 1.214325 GTTAATGTGGCCCCGTTGC 59.786 57.895 0.00 0.00 0.00 4.17
149 150 1.228583 TTAATGTGGCCCCGTTGCA 60.229 52.632 0.00 0.00 0.00 4.08
150 151 0.827925 TTAATGTGGCCCCGTTGCAA 60.828 50.000 0.00 0.00 0.00 4.08
151 152 0.613292 TAATGTGGCCCCGTTGCAAT 60.613 50.000 0.59 0.00 0.00 3.56
152 153 2.169937 AATGTGGCCCCGTTGCAATG 62.170 55.000 11.90 11.90 0.00 2.82
153 154 4.740431 GTGGCCCCGTTGCAATGC 62.740 66.667 13.42 8.67 0.00 3.56
155 156 4.740431 GGCCCCGTTGCAATGCAC 62.740 66.667 7.72 2.39 38.71 4.57
157 158 4.418401 CCCCGTTGCAATGCACGG 62.418 66.667 28.95 28.95 45.37 4.94
161 162 4.341502 GTTGCAATGCACGGGCGT 62.342 61.111 7.72 0.00 45.35 5.68
163 164 3.550339 TTGCAATGCACGGGCGTTC 62.550 57.895 15.71 10.39 46.01 3.95
164 165 3.737172 GCAATGCACGGGCGTTCT 61.737 61.111 15.71 0.00 46.01 3.01
165 166 2.953821 CAATGCACGGGCGTTCTT 59.046 55.556 15.71 0.00 46.01 2.52
166 167 1.154225 CAATGCACGGGCGTTCTTC 60.154 57.895 15.71 0.00 46.01 2.87
167 168 1.302511 AATGCACGGGCGTTCTTCT 60.303 52.632 12.34 0.00 46.01 2.85
168 169 0.036765 AATGCACGGGCGTTCTTCTA 60.037 50.000 12.34 0.00 46.01 2.10
169 170 0.460284 ATGCACGGGCGTTCTTCTAG 60.460 55.000 4.58 0.00 45.35 2.43
170 171 1.080025 GCACGGGCGTTCTTCTAGT 60.080 57.895 0.00 0.00 0.00 2.57
171 172 0.171903 GCACGGGCGTTCTTCTAGTA 59.828 55.000 0.00 0.00 0.00 1.82
172 173 1.905449 CACGGGCGTTCTTCTAGTAC 58.095 55.000 0.00 0.00 0.00 2.73
173 174 0.813821 ACGGGCGTTCTTCTAGTACC 59.186 55.000 0.00 0.00 0.00 3.34
174 175 0.813184 CGGGCGTTCTTCTAGTACCA 59.187 55.000 0.00 0.00 0.00 3.25
175 176 1.202268 CGGGCGTTCTTCTAGTACCAG 60.202 57.143 0.00 0.00 0.00 4.00
176 177 1.823610 GGGCGTTCTTCTAGTACCAGT 59.176 52.381 0.00 0.00 0.00 4.00
177 178 2.416972 GGGCGTTCTTCTAGTACCAGTG 60.417 54.545 0.00 0.00 0.00 3.66
178 179 2.230750 GGCGTTCTTCTAGTACCAGTGT 59.769 50.000 0.00 0.00 0.00 3.55
179 180 3.441572 GGCGTTCTTCTAGTACCAGTGTA 59.558 47.826 0.00 0.00 0.00 2.90
180 181 4.082571 GGCGTTCTTCTAGTACCAGTGTAA 60.083 45.833 0.00 0.00 0.00 2.41
181 182 5.464168 GCGTTCTTCTAGTACCAGTGTAAA 58.536 41.667 0.00 0.00 0.00 2.01
182 183 5.344396 GCGTTCTTCTAGTACCAGTGTAAAC 59.656 44.000 0.00 0.00 0.00 2.01
183 184 6.441274 CGTTCTTCTAGTACCAGTGTAAACA 58.559 40.000 0.00 0.00 0.00 2.83
184 185 6.361748 CGTTCTTCTAGTACCAGTGTAAACAC 59.638 42.308 5.07 5.07 46.77 3.32
223 224 9.778741 TGTCAAAACAGAGTATTTCAATAGACT 57.221 29.630 0.00 0.00 0.00 3.24
225 226 9.219603 TCAAAACAGAGTATTTCAATAGACTGG 57.780 33.333 13.11 0.00 33.48 4.00
226 227 7.617041 AAACAGAGTATTTCAATAGACTGGC 57.383 36.000 13.11 0.00 33.48 4.85
227 228 5.675538 ACAGAGTATTTCAATAGACTGGCC 58.324 41.667 0.00 0.00 33.48 5.36
228 229 5.059833 CAGAGTATTTCAATAGACTGGCCC 58.940 45.833 0.00 0.00 0.00 5.80
229 230 4.971924 AGAGTATTTCAATAGACTGGCCCT 59.028 41.667 0.00 0.00 0.00 5.19
230 231 5.071115 AGAGTATTTCAATAGACTGGCCCTC 59.929 44.000 0.00 0.00 0.00 4.30
231 232 3.584733 ATTTCAATAGACTGGCCCTCC 57.415 47.619 0.00 0.00 0.00 4.30
232 233 1.213296 TTCAATAGACTGGCCCTCCC 58.787 55.000 0.00 0.00 0.00 4.30
233 234 0.343372 TCAATAGACTGGCCCTCCCT 59.657 55.000 0.00 0.00 0.00 4.20
234 235 1.578703 TCAATAGACTGGCCCTCCCTA 59.421 52.381 0.00 0.00 0.00 3.53
235 236 2.022428 TCAATAGACTGGCCCTCCCTAA 60.022 50.000 0.00 0.00 0.00 2.69
236 237 2.982488 CAATAGACTGGCCCTCCCTAAT 59.018 50.000 0.00 0.00 0.00 1.73
237 238 2.889522 TAGACTGGCCCTCCCTAATT 57.110 50.000 0.00 0.00 0.00 1.40
238 239 2.889522 AGACTGGCCCTCCCTAATTA 57.110 50.000 0.00 0.00 0.00 1.40
239 240 2.695585 AGACTGGCCCTCCCTAATTAG 58.304 52.381 0.00 5.43 0.00 1.73
240 241 1.700186 GACTGGCCCTCCCTAATTAGG 59.300 57.143 22.75 22.75 43.25 2.69
241 242 1.010917 ACTGGCCCTCCCTAATTAGGT 59.989 52.381 26.38 5.36 42.03 3.08
242 243 2.136026 CTGGCCCTCCCTAATTAGGTT 58.864 52.381 26.38 0.00 42.03 3.50
243 244 2.514160 CTGGCCCTCCCTAATTAGGTTT 59.486 50.000 26.38 0.00 42.03 3.27
244 245 3.720002 CTGGCCCTCCCTAATTAGGTTTA 59.280 47.826 26.38 12.90 42.03 2.01
245 246 3.720002 TGGCCCTCCCTAATTAGGTTTAG 59.280 47.826 26.38 19.79 42.03 1.85
246 247 3.498121 GGCCCTCCCTAATTAGGTTTAGC 60.498 52.174 26.38 21.99 42.03 3.09
247 248 3.137728 GCCCTCCCTAATTAGGTTTAGCA 59.862 47.826 26.38 5.78 42.03 3.49
248 249 4.385977 GCCCTCCCTAATTAGGTTTAGCAA 60.386 45.833 26.38 5.65 42.03 3.91
249 250 5.131067 CCCTCCCTAATTAGGTTTAGCAAC 58.869 45.833 26.38 0.00 42.03 4.17
250 251 4.814771 CCTCCCTAATTAGGTTTAGCAACG 59.185 45.833 26.38 10.65 42.03 4.10
251 252 5.425196 TCCCTAATTAGGTTTAGCAACGT 57.575 39.130 26.38 0.00 42.03 3.99
252 253 5.807909 TCCCTAATTAGGTTTAGCAACGTT 58.192 37.500 26.38 0.00 42.03 3.99
253 254 6.240145 TCCCTAATTAGGTTTAGCAACGTTT 58.760 36.000 26.38 0.00 42.03 3.60
254 255 7.393216 TCCCTAATTAGGTTTAGCAACGTTTA 58.607 34.615 26.38 0.00 42.03 2.01
255 256 7.550196 TCCCTAATTAGGTTTAGCAACGTTTAG 59.450 37.037 26.38 8.43 42.03 1.85
256 257 7.184779 CCTAATTAGGTTTAGCAACGTTTAGC 58.815 38.462 21.62 0.00 38.69 3.09
257 258 5.556355 ATTAGGTTTAGCAACGTTTAGCC 57.444 39.130 0.00 0.00 33.11 3.93
258 259 2.156917 AGGTTTAGCAACGTTTAGCCC 58.843 47.619 0.00 0.00 33.13 5.19
259 260 2.156917 GGTTTAGCAACGTTTAGCCCT 58.843 47.619 0.00 0.00 33.13 5.19
260 261 2.161012 GGTTTAGCAACGTTTAGCCCTC 59.839 50.000 0.00 0.00 33.13 4.30
261 262 2.103537 TTAGCAACGTTTAGCCCTCC 57.896 50.000 0.00 0.00 0.00 4.30
262 263 0.251073 TAGCAACGTTTAGCCCTCCC 59.749 55.000 0.00 0.00 0.00 4.30
263 264 2.044555 GCAACGTTTAGCCCTCCCC 61.045 63.158 0.00 0.00 0.00 4.81
264 265 1.377229 CAACGTTTAGCCCTCCCCA 59.623 57.895 0.00 0.00 0.00 4.96
265 266 0.034477 CAACGTTTAGCCCTCCCCAT 60.034 55.000 0.00 0.00 0.00 4.00
266 267 0.702316 AACGTTTAGCCCTCCCCATT 59.298 50.000 0.00 0.00 0.00 3.16
267 268 0.034477 ACGTTTAGCCCTCCCCATTG 60.034 55.000 0.00 0.00 0.00 2.82
268 269 0.751643 CGTTTAGCCCTCCCCATTGG 60.752 60.000 0.00 0.00 0.00 3.16
269 270 0.629058 GTTTAGCCCTCCCCATTGGA 59.371 55.000 3.62 0.00 42.41 3.53
270 271 1.217942 GTTTAGCCCTCCCCATTGGAT 59.782 52.381 3.62 0.00 44.07 3.41
271 272 1.619298 TTAGCCCTCCCCATTGGATT 58.381 50.000 3.62 0.00 44.07 3.01
272 273 1.619298 TAGCCCTCCCCATTGGATTT 58.381 50.000 3.62 0.00 44.07 2.17
273 274 0.718408 AGCCCTCCCCATTGGATTTT 59.282 50.000 3.62 0.00 44.07 1.82
274 275 1.123077 GCCCTCCCCATTGGATTTTC 58.877 55.000 3.62 0.00 44.07 2.29
275 276 1.793414 CCCTCCCCATTGGATTTTCC 58.207 55.000 3.62 0.00 44.07 3.13
276 277 1.291939 CCCTCCCCATTGGATTTTCCT 59.708 52.381 3.62 0.00 44.07 3.36
277 278 2.391678 CCTCCCCATTGGATTTTCCTG 58.608 52.381 3.62 0.00 44.07 3.86
278 279 2.391678 CTCCCCATTGGATTTTCCTGG 58.608 52.381 3.62 0.00 44.07 4.45
279 280 0.832626 CCCCATTGGATTTTCCTGGC 59.167 55.000 3.62 0.00 37.46 4.85
280 281 1.623279 CCCCATTGGATTTTCCTGGCT 60.623 52.381 3.62 0.00 37.46 4.75
281 282 1.758862 CCCATTGGATTTTCCTGGCTC 59.241 52.381 3.62 0.00 37.46 4.70
282 283 1.758862 CCATTGGATTTTCCTGGCTCC 59.241 52.381 0.00 0.00 37.46 4.70
283 284 1.406539 CATTGGATTTTCCTGGCTCCG 59.593 52.381 0.00 0.00 37.46 4.63
284 285 0.965363 TTGGATTTTCCTGGCTCCGC 60.965 55.000 0.00 0.00 37.46 5.54
285 286 2.837031 TGGATTTTCCTGGCTCCGCC 62.837 60.000 0.00 0.00 41.23 6.13
296 297 4.742201 CTCCGCCACTGACCACGG 62.742 72.222 0.00 0.00 46.97 4.94
365 366 1.729470 TTGTTTGCGTCGGTGCCAAT 61.729 50.000 0.00 0.00 0.00 3.16
433 434 0.744874 TATGCTTTCCTCCTCCGACG 59.255 55.000 0.00 0.00 0.00 5.12
478 479 1.453155 ATGGAGTTTGATGGCGTGTC 58.547 50.000 0.00 0.00 0.00 3.67
483 484 2.884980 TTTGATGGCGTGTCCGGGA 61.885 57.895 0.00 0.00 37.80 5.14
485 486 2.588877 GATGGCGTGTCCGGGATG 60.589 66.667 0.00 0.00 37.80 3.51
498 499 2.505982 GGATGCTGCCTCGGCTAA 59.494 61.111 9.65 0.00 42.51 3.09
504 505 2.717390 TGCTGCCTCGGCTAAATTTTA 58.283 42.857 9.65 0.00 42.51 1.52
509 510 5.507985 GCTGCCTCGGCTAAATTTTATCAAT 60.508 40.000 9.65 0.00 42.51 2.57
529 530 5.121611 TCAATGACAATAACTTCGCATTCGT 59.878 36.000 0.00 0.00 36.96 3.85
542 543 6.366877 ACTTCGCATTCGTTAAGCTACTTTAA 59.633 34.615 0.00 0.00 36.96 1.52
559 560 7.332678 GCTACTTTAAAGATCCGGAAAGTTGTA 59.667 37.037 21.92 9.83 41.25 2.41
568 569 3.382227 TCCGGAAAGTTGTATATCAGCGA 59.618 43.478 0.00 0.00 32.51 4.93
571 572 4.982295 CGGAAAGTTGTATATCAGCGATGA 59.018 41.667 5.53 5.53 32.51 2.92
599 600 1.000163 TCGAGCTGAGCGAACTCTTTT 60.000 47.619 0.00 0.00 43.85 2.27
611 612 4.919754 GCGAACTCTTTTTCTTGATTGCAT 59.080 37.500 0.00 0.00 0.00 3.96
612 613 5.403466 GCGAACTCTTTTTCTTGATTGCATT 59.597 36.000 0.00 0.00 0.00 3.56
638 639 3.055094 TCCTTCTTGTCTTGTCCTATGGC 60.055 47.826 0.00 0.00 0.00 4.40
639 640 3.274288 CTTCTTGTCTTGTCCTATGGCC 58.726 50.000 0.00 0.00 0.00 5.36
644 645 4.919774 TGTCTTGTCCTATGGCCTTTTA 57.080 40.909 3.32 0.00 0.00 1.52
655 656 4.789012 ATGGCCTTTTATGAGTTGTGTG 57.211 40.909 3.32 0.00 0.00 3.82
690 691 1.202758 TGCGAAGGTGTCAAAGTGGAT 60.203 47.619 0.00 0.00 0.00 3.41
693 694 2.480419 CGAAGGTGTCAAAGTGGATGTC 59.520 50.000 0.00 0.00 0.00 3.06
694 695 3.744660 GAAGGTGTCAAAGTGGATGTCT 58.255 45.455 0.00 0.00 0.00 3.41
695 696 4.560716 CGAAGGTGTCAAAGTGGATGTCTA 60.561 45.833 0.00 0.00 0.00 2.59
697 698 2.993899 GGTGTCAAAGTGGATGTCTACG 59.006 50.000 0.00 0.00 32.18 3.51
742 744 1.670083 GGTTTGCGCGGAAGTAGGT 60.670 57.895 14.05 0.00 0.00 3.08
848 850 3.487202 CGGGTTCGTCCGCACATG 61.487 66.667 0.00 0.00 43.71 3.21
872 874 1.005394 ATGCCGTTCGGTTCGTTCT 60.005 52.632 12.81 0.00 0.00 3.01
877 883 1.454653 CCGTTCGGTTCGTTCTTTCTC 59.545 52.381 2.82 0.00 0.00 2.87
878 884 1.121967 CGTTCGGTTCGTTCTTTCTCG 59.878 52.381 0.00 0.00 0.00 4.04
883 889 2.350580 CGGTTCGTTCTTTCTCGTCTCT 60.351 50.000 0.00 0.00 0.00 3.10
896 902 4.377897 TCTCGTCTCTTGGTTTTTCCTTC 58.622 43.478 0.00 0.00 37.07 3.46
951 972 2.690881 CCGGATCCCCACTCCCAA 60.691 66.667 6.06 0.00 0.00 4.12
952 973 2.305607 CCGGATCCCCACTCCCAAA 61.306 63.158 6.06 0.00 0.00 3.28
953 974 1.645402 CCGGATCCCCACTCCCAAAT 61.645 60.000 6.06 0.00 0.00 2.32
963 984 1.528586 CACTCCCAAATGCGATCGATC 59.471 52.381 21.57 15.68 0.00 3.69
977 998 1.459450 TCGATCGACACAGTGATCCA 58.541 50.000 15.15 0.00 38.17 3.41
994 1015 1.277273 TCCACTGGCTGACTGATTGAG 59.723 52.381 0.00 0.00 0.00 3.02
996 1017 1.277273 CACTGGCTGACTGATTGAGGA 59.723 52.381 0.00 0.00 0.00 3.71
997 1018 1.554160 ACTGGCTGACTGATTGAGGAG 59.446 52.381 0.00 0.00 0.00 3.69
998 1019 0.251354 TGGCTGACTGATTGAGGAGC 59.749 55.000 0.00 0.00 32.75 4.70
999 1020 0.809241 GGCTGACTGATTGAGGAGCG 60.809 60.000 0.00 0.00 33.81 5.03
1000 1021 0.174389 GCTGACTGATTGAGGAGCGA 59.826 55.000 0.00 0.00 0.00 4.93
1001 1022 1.202510 GCTGACTGATTGAGGAGCGAT 60.203 52.381 0.00 0.00 0.00 4.58
1080 1106 1.692519 CCTAATTCCTGGTACCTCCCG 59.307 57.143 14.36 0.00 34.77 5.14
1103 1129 3.307975 CCTCCTCATCACATCACCTTGTT 60.308 47.826 0.00 0.00 0.00 2.83
1104 1130 3.678289 TCCTCATCACATCACCTTGTTG 58.322 45.455 0.00 0.00 0.00 3.33
1105 1131 3.327464 TCCTCATCACATCACCTTGTTGA 59.673 43.478 0.00 0.00 0.00 3.18
1106 1132 4.019051 TCCTCATCACATCACCTTGTTGAT 60.019 41.667 0.00 0.00 36.62 2.57
1107 1133 5.189539 TCCTCATCACATCACCTTGTTGATA 59.810 40.000 0.00 0.00 34.29 2.15
1108 1134 6.060136 CCTCATCACATCACCTTGTTGATAT 58.940 40.000 0.00 0.00 34.29 1.63
1109 1135 7.071071 TCCTCATCACATCACCTTGTTGATATA 59.929 37.037 0.00 0.00 34.29 0.86
1110 1136 7.881751 CCTCATCACATCACCTTGTTGATATAT 59.118 37.037 0.00 0.00 34.29 0.86
1111 1137 9.933723 CTCATCACATCACCTTGTTGATATATA 57.066 33.333 0.00 0.00 34.29 0.86
1140 1166 1.849823 CCCCTCATCCCATCTCCCC 60.850 68.421 0.00 0.00 0.00 4.81
1141 1167 1.241327 CCCTCATCCCATCTCCCCT 59.759 63.158 0.00 0.00 0.00 4.79
1142 1168 1.132554 CCCTCATCCCATCTCCCCTG 61.133 65.000 0.00 0.00 0.00 4.45
1143 1169 1.759881 CTCATCCCATCTCCCCTGC 59.240 63.158 0.00 0.00 0.00 4.85
1144 1170 2.109517 CTCATCCCATCTCCCCTGCG 62.110 65.000 0.00 0.00 0.00 5.18
1145 1171 2.040464 ATCCCATCTCCCCTGCGT 60.040 61.111 0.00 0.00 0.00 5.24
1146 1172 2.143419 ATCCCATCTCCCCTGCGTC 61.143 63.158 0.00 0.00 0.00 5.19
1147 1173 2.611964 ATCCCATCTCCCCTGCGTCT 62.612 60.000 0.00 0.00 0.00 4.18
1148 1174 2.801631 CCCATCTCCCCTGCGTCTC 61.802 68.421 0.00 0.00 0.00 3.36
1149 1175 2.801631 CCATCTCCCCTGCGTCTCC 61.802 68.421 0.00 0.00 0.00 3.71
1162 1188 0.825840 CGTCTCCCATCTCTCTCCCC 60.826 65.000 0.00 0.00 0.00 4.81
1163 1189 0.471022 GTCTCCCATCTCTCTCCCCC 60.471 65.000 0.00 0.00 0.00 5.40
1164 1190 0.931250 TCTCCCATCTCTCTCCCCCA 60.931 60.000 0.00 0.00 0.00 4.96
1165 1191 0.030705 CTCCCATCTCTCTCCCCCAA 60.031 60.000 0.00 0.00 0.00 4.12
1166 1192 0.326618 TCCCATCTCTCTCCCCCAAC 60.327 60.000 0.00 0.00 0.00 3.77
1168 1194 1.348775 CCATCTCTCTCCCCCAACCC 61.349 65.000 0.00 0.00 0.00 4.11
1169 1195 0.327000 CATCTCTCTCCCCCAACCCT 60.327 60.000 0.00 0.00 0.00 4.34
1172 1198 0.689412 CTCTCTCCCCCAACCCTCTC 60.689 65.000 0.00 0.00 0.00 3.20
1173 1199 2.038975 TCTCCCCCAACCCTCTCG 59.961 66.667 0.00 0.00 0.00 4.04
1174 1200 2.038975 CTCCCCCAACCCTCTCGA 59.961 66.667 0.00 0.00 0.00 4.04
1175 1201 1.612442 CTCCCCCAACCCTCTCGAA 60.612 63.158 0.00 0.00 0.00 3.71
1178 1204 1.209621 CCCCCAACCCTCTCGAATTA 58.790 55.000 0.00 0.00 0.00 1.40
1179 1205 1.774856 CCCCCAACCCTCTCGAATTAT 59.225 52.381 0.00 0.00 0.00 1.28
1226 1291 5.123979 GCGGTTTTCATCTTAGAAACTCCAT 59.876 40.000 0.00 0.00 37.24 3.41
1227 1292 6.546395 CGGTTTTCATCTTAGAAACTCCATG 58.454 40.000 0.00 0.00 37.24 3.66
1229 1294 5.801350 TTTCATCTTAGAAACTCCATGCG 57.199 39.130 0.00 0.00 32.88 4.73
1248 1319 1.142474 GCTGCTGCATTTGGTGAAAC 58.858 50.000 11.11 0.00 39.41 2.78
1249 1320 1.538634 GCTGCTGCATTTGGTGAAACA 60.539 47.619 11.11 0.00 37.67 2.83
1267 1338 1.147473 CAAATTTGTTCCTTGGCGGC 58.853 50.000 10.15 0.00 0.00 6.53
1274 1345 0.678048 GTTCCTTGGCGGCAAGATCT 60.678 55.000 42.97 0.00 34.26 2.75
1275 1346 0.392998 TTCCTTGGCGGCAAGATCTC 60.393 55.000 42.97 0.00 34.26 2.75
1279 1350 2.125512 GGCGGCAAGATCTCGTGT 60.126 61.111 3.07 0.00 0.00 4.49
1290 1368 2.513026 ATCTCGTGTGAGCTGGCCAC 62.513 60.000 0.00 0.00 42.26 5.01
1326 1404 2.158449 CGAATCTGAGTGAACACCTTGC 59.842 50.000 1.11 0.00 0.00 4.01
1328 1406 2.245159 TCTGAGTGAACACCTTGCAG 57.755 50.000 1.11 5.22 0.00 4.41
1342 1420 4.334759 CACCTTGCAGAAATGATGTAGGAG 59.665 45.833 0.89 0.00 0.00 3.69
1343 1421 4.018960 ACCTTGCAGAAATGATGTAGGAGT 60.019 41.667 0.89 0.00 0.00 3.85
1344 1422 5.189736 ACCTTGCAGAAATGATGTAGGAGTA 59.810 40.000 0.89 0.00 0.00 2.59
1345 1423 5.757320 CCTTGCAGAAATGATGTAGGAGTAG 59.243 44.000 0.00 0.00 0.00 2.57
1346 1424 5.282055 TGCAGAAATGATGTAGGAGTAGG 57.718 43.478 0.00 0.00 0.00 3.18
1347 1425 4.101585 TGCAGAAATGATGTAGGAGTAGGG 59.898 45.833 0.00 0.00 0.00 3.53
1350 1428 4.656112 AGAAATGATGTAGGAGTAGGGGTG 59.344 45.833 0.00 0.00 0.00 4.61
1375 1453 2.103263 GGTAGTGGCGAATGAGAGGAAT 59.897 50.000 0.00 0.00 0.00 3.01
1382 1460 5.296780 GTGGCGAATGAGAGGAATATTTCAA 59.703 40.000 0.00 0.00 0.00 2.69
1430 1517 3.873952 AGATTATTCAGGAGCGAAACAGC 59.126 43.478 0.00 0.00 37.41 4.40
1457 1544 5.340439 AACCTTCAGTAGATACCTTTCCG 57.660 43.478 0.00 0.00 0.00 4.30
1463 1563 4.401519 TCAGTAGATACCTTTCCGTGGAAG 59.598 45.833 1.01 0.00 35.38 3.46
1598 1703 1.810030 GTGGTCGTCGAGATTGGGC 60.810 63.158 0.00 0.00 0.00 5.36
1615 1720 2.225343 TGGGCACATTTCCTTCCATCTT 60.225 45.455 0.00 0.00 0.00 2.40
1630 1735 3.119743 TCCATCTTCACAAGGTACGTACG 60.120 47.826 18.98 15.01 0.00 3.67
1631 1736 3.366679 CCATCTTCACAAGGTACGTACGT 60.367 47.826 25.98 25.98 0.00 3.57
1632 1737 4.142622 CCATCTTCACAAGGTACGTACGTA 60.143 45.833 23.60 23.60 0.00 3.57
1650 1755 3.243501 ACGTACGGTTGTTTTGCTCTCTA 60.244 43.478 21.06 0.00 0.00 2.43
1651 1756 3.120782 CGTACGGTTGTTTTGCTCTCTAC 59.879 47.826 7.57 0.00 0.00 2.59
1664 1769 3.872182 TGCTCTCTACATCTCTGTCGTAC 59.128 47.826 0.00 0.00 36.79 3.67
1668 1773 6.606234 TCTCTACATCTCTGTCGTACATTC 57.394 41.667 0.00 0.00 36.79 2.67
1675 1780 3.824443 TCTCTGTCGTACATTCCTCAACA 59.176 43.478 0.00 0.00 0.00 3.33
1676 1781 4.279922 TCTCTGTCGTACATTCCTCAACAA 59.720 41.667 0.00 0.00 0.00 2.83
1679 1784 3.496884 TGTCGTACATTCCTCAACAAAGC 59.503 43.478 0.00 0.00 0.00 3.51
1682 1787 4.759693 TCGTACATTCCTCAACAAAGCAAT 59.240 37.500 0.00 0.00 0.00 3.56
1691 1796 5.360714 TCCTCAACAAAGCAATTTCTCTGTT 59.639 36.000 0.00 0.00 0.00 3.16
1692 1797 5.689068 CCTCAACAAAGCAATTTCTCTGTTC 59.311 40.000 0.00 0.00 0.00 3.18
1693 1798 5.591099 TCAACAAAGCAATTTCTCTGTTCC 58.409 37.500 0.00 0.00 0.00 3.62
1694 1799 5.360714 TCAACAAAGCAATTTCTCTGTTCCT 59.639 36.000 0.00 0.00 0.00 3.36
1695 1800 5.444663 ACAAAGCAATTTCTCTGTTCCTC 57.555 39.130 0.00 0.00 0.00 3.71
1696 1801 5.136105 ACAAAGCAATTTCTCTGTTCCTCT 58.864 37.500 0.00 0.00 0.00 3.69
1704 1809 0.390472 CTCTGTTCCTCTGTTCCGGC 60.390 60.000 0.00 0.00 0.00 6.13
1739 1844 5.535783 TCCAGTGTCAAATTGTCACATCATT 59.464 36.000 21.36 2.09 38.55 2.57
1745 1850 7.113965 GTGTCAAATTGTCACATCATTCTCAAC 59.886 37.037 16.20 0.00 36.63 3.18
1746 1851 7.140705 GTCAAATTGTCACATCATTCTCAACA 58.859 34.615 0.00 0.00 0.00 3.33
1751 1856 6.016213 TGTCACATCATTCTCAACATTTGG 57.984 37.500 0.00 0.00 0.00 3.28
1756 1861 9.022884 TCACATCATTCTCAACATTTGGAAATA 57.977 29.630 0.00 0.00 0.00 1.40
1784 1889 8.954950 ATCCATCTACATGCAGTAATTATAGC 57.045 34.615 0.00 5.44 30.92 2.97
1793 1898 4.263462 TGCAGTAATTATAGCCCTCCATGG 60.263 45.833 4.97 4.97 0.00 3.66
1809 1914 6.301486 CCTCCATGGATGATTATGACTTGAA 58.699 40.000 16.63 0.00 38.35 2.69
1810 1915 6.206243 CCTCCATGGATGATTATGACTTGAAC 59.794 42.308 16.63 0.00 38.35 3.18
1811 1916 5.759763 TCCATGGATGATTATGACTTGAACG 59.240 40.000 11.44 0.00 0.00 3.95
1812 1917 5.759763 CCATGGATGATTATGACTTGAACGA 59.240 40.000 5.56 0.00 0.00 3.85
1813 1918 6.260714 CCATGGATGATTATGACTTGAACGAA 59.739 38.462 5.56 0.00 0.00 3.85
1814 1919 7.201723 CCATGGATGATTATGACTTGAACGAAA 60.202 37.037 5.56 0.00 0.00 3.46
1815 1920 7.072177 TGGATGATTATGACTTGAACGAAAC 57.928 36.000 0.00 0.00 0.00 2.78
1836 3109 6.699575 AACTGCTACTCACAACTGAAATTT 57.300 33.333 0.00 0.00 0.00 1.82
1861 3138 5.470098 GCCATCTCTTTCACTGACTTGTAAA 59.530 40.000 0.00 0.00 0.00 2.01
1864 3141 9.219603 CCATCTCTTTCACTGACTTGTAAATTA 57.780 33.333 0.00 0.00 0.00 1.40
1866 3143 9.778741 ATCTCTTTCACTGACTTGTAAATTACA 57.221 29.630 1.08 1.08 36.79 2.41
1867 3144 9.261180 TCTCTTTCACTGACTTGTAAATTACAG 57.739 33.333 5.94 3.98 40.24 2.74
1880 3157 4.766404 AAATTACAGGCTGCACTTGTAC 57.234 40.909 15.89 0.00 0.00 2.90
1881 3158 2.920724 TTACAGGCTGCACTTGTACA 57.079 45.000 15.89 0.00 0.00 2.90
1882 3159 3.417069 TTACAGGCTGCACTTGTACAT 57.583 42.857 15.89 0.00 0.00 2.29
1928 3206 1.872952 TGTACTGACAACATGCAGCAC 59.127 47.619 0.00 0.00 35.57 4.40
1930 3208 0.664761 ACTGACAACATGCAGCACAC 59.335 50.000 0.00 0.00 35.57 3.82
2004 3282 0.321346 TGCAGAAGCTCATCACCGAA 59.679 50.000 0.00 0.00 42.74 4.30
2013 3291 0.980423 TCATCACCGAATCCACCACA 59.020 50.000 0.00 0.00 0.00 4.17
2017 3295 1.207089 TCACCGAATCCACCACATCTC 59.793 52.381 0.00 0.00 0.00 2.75
2022 3300 1.417890 GAATCCACCACATCTCCCGAT 59.582 52.381 0.00 0.00 0.00 4.18
2119 3400 4.508124 CCAAGTTCTGCTACGATATCCAAC 59.492 45.833 0.00 0.00 0.00 3.77
2406 3687 1.548719 CCCATGGTCGAGAACTACACA 59.451 52.381 11.73 0.00 0.00 3.72
2643 3924 3.539107 CTTAACCGGCGCGACGTC 61.539 66.667 34.72 5.18 0.00 4.34
2757 4038 2.649034 GAGAAGGGCGTCACGACA 59.351 61.111 4.83 0.00 36.10 4.35
2890 4171 1.041437 GGACCTCCTGATCCCTAACG 58.959 60.000 0.00 0.00 0.00 3.18
2894 4175 0.830648 CTCCTGATCCCTAACGCCAA 59.169 55.000 0.00 0.00 0.00 4.52
3117 4398 1.673665 GTGCTCCCAGTTCCAGCAG 60.674 63.158 0.00 0.00 43.75 4.24
3141 4422 2.491022 GGCGCTCGTCCCTGACTAT 61.491 63.158 7.64 0.00 0.00 2.12
3199 4480 4.466370 TCGACATCTTCATCAAGGTAGGTT 59.534 41.667 0.00 0.00 0.00 3.50
3258 4539 2.488153 AGCTTGCGTTTGATACCTTTCC 59.512 45.455 0.00 0.00 0.00 3.13
3262 4543 1.060122 GCGTTTGATACCTTTCCGTCG 59.940 52.381 0.00 0.00 0.00 5.12
3861 5142 4.252570 TGGGGTGTTAGTTTTGGAAGAA 57.747 40.909 0.00 0.00 0.00 2.52
3908 5197 8.023021 TCAGATTGTAGAATAGGTTAGCACAT 57.977 34.615 0.00 0.00 0.00 3.21
3918 5207 3.356290 AGGTTAGCACATTGGTTCCATC 58.644 45.455 0.00 0.00 0.00 3.51
3941 5231 6.852664 TCTTTTCCCGCTGAAATAAGAATTC 58.147 36.000 0.00 0.00 42.38 2.17
3947 5237 6.098409 TCCCGCTGAAATAAGAATTCTAGAGT 59.902 38.462 8.75 0.00 0.00 3.24
3951 5241 8.747666 CGCTGAAATAAGAATTCTAGAGTGTAC 58.252 37.037 8.75 0.00 0.00 2.90
3967 5260 4.932146 AGTGTACACATTTTTGAACAGCC 58.068 39.130 27.06 0.00 0.00 4.85
3979 5272 8.711457 CATTTTTGAACAGCCGATTATTTCTTT 58.289 29.630 0.00 0.00 0.00 2.52
3983 5276 5.065988 TGAACAGCCGATTATTTCTTTAGGC 59.934 40.000 0.00 0.00 43.07 3.93
3985 5278 4.335594 ACAGCCGATTATTTCTTTAGGCAC 59.664 41.667 6.34 0.00 44.97 5.01
3991 5284 7.134815 CCGATTATTTCTTTAGGCACTGATTG 58.865 38.462 0.00 0.00 41.52 2.67
3993 5286 8.562892 CGATTATTTCTTTAGGCACTGATTGAT 58.437 33.333 0.00 0.00 41.52 2.57
3998 5291 8.862325 TTTCTTTAGGCACTGATTGATTTAGA 57.138 30.769 0.00 0.00 41.52 2.10
3999 5292 9.466497 TTTCTTTAGGCACTGATTGATTTAGAT 57.534 29.630 0.00 0.00 41.52 1.98
4000 5293 8.442632 TCTTTAGGCACTGATTGATTTAGATG 57.557 34.615 0.00 0.00 41.52 2.90
4001 5294 8.267183 TCTTTAGGCACTGATTGATTTAGATGA 58.733 33.333 0.00 0.00 41.52 2.92
4002 5295 8.806429 TTTAGGCACTGATTGATTTAGATGAA 57.194 30.769 0.00 0.00 41.52 2.57
4020 5313 7.798596 AGATGAAAAAGCAGATATACACAGG 57.201 36.000 0.00 0.00 0.00 4.00
4023 5316 7.759489 TGAAAAAGCAGATATACACAGGTTT 57.241 32.000 0.00 0.00 0.00 3.27
4024 5317 8.177119 TGAAAAAGCAGATATACACAGGTTTT 57.823 30.769 0.00 0.00 40.35 2.43
4025 5318 8.081633 TGAAAAAGCAGATATACACAGGTTTTG 58.918 33.333 11.61 0.00 39.11 2.44
4044 5337 6.306397 GTTTTGCTAGCATAATTTTGGCAAC 58.694 36.000 20.13 1.74 37.82 4.17
4086 6414 2.222227 AAAGAAGGGGAGCCATGAAC 57.778 50.000 0.00 0.00 0.00 3.18
4092 6420 1.318158 GGGGAGCCATGAACTGCAAG 61.318 60.000 8.93 0.00 42.29 4.01
4098 6426 1.469251 GCCATGAACTGCAAGCAGATG 60.469 52.381 27.17 18.94 46.30 2.90
4103 6431 4.160642 TGAACTGCAAGCAGATGGATAT 57.839 40.909 27.17 1.15 46.30 1.63
4104 6432 5.294734 TGAACTGCAAGCAGATGGATATA 57.705 39.130 27.17 3.39 46.30 0.86
4105 6433 5.303165 TGAACTGCAAGCAGATGGATATAG 58.697 41.667 27.17 0.00 46.30 1.31
4106 6434 5.070847 TGAACTGCAAGCAGATGGATATAGA 59.929 40.000 27.17 0.00 46.30 1.98
4107 6435 5.149973 ACTGCAAGCAGATGGATATAGAG 57.850 43.478 27.17 0.00 46.30 2.43
4114 6442 7.605691 GCAAGCAGATGGATATAGAGTACAAAT 59.394 37.037 0.00 0.00 0.00 2.32
4138 6466 9.877178 AATACTTCAACATTTTAACAAACCACA 57.123 25.926 0.00 0.00 0.00 4.17
4139 6467 7.589574 ACTTCAACATTTTAACAAACCACAC 57.410 32.000 0.00 0.00 0.00 3.82
4180 6552 6.644347 ACACAAATATTTGAACAAACCACCA 58.356 32.000 30.18 0.00 40.55 4.17
4181 6553 6.760770 ACACAAATATTTGAACAAACCACCAG 59.239 34.615 30.18 3.44 40.55 4.00
4182 6554 6.983307 CACAAATATTTGAACAAACCACCAGA 59.017 34.615 30.18 0.00 40.55 3.86
4183 6555 7.169645 CACAAATATTTGAACAAACCACCAGAG 59.830 37.037 30.18 2.49 40.55 3.35
4184 6556 6.976934 AATATTTGAACAAACCACCAGAGT 57.023 33.333 2.03 0.00 32.51 3.24
4186 6558 8.472007 AATATTTGAACAAACCACCAGAGTTA 57.528 30.769 2.03 0.00 32.51 2.24
4187 6559 6.783708 ATTTGAACAAACCACCAGAGTTAA 57.216 33.333 2.03 0.00 32.51 2.01
4188 6560 6.591750 TTTGAACAAACCACCAGAGTTAAA 57.408 33.333 0.00 0.00 0.00 1.52
4189 6561 6.783708 TTGAACAAACCACCAGAGTTAAAT 57.216 33.333 0.00 0.00 0.00 1.40
4190 6562 7.883391 TTGAACAAACCACCAGAGTTAAATA 57.117 32.000 0.00 0.00 0.00 1.40
4191 6563 7.504924 TGAACAAACCACCAGAGTTAAATAG 57.495 36.000 0.00 0.00 0.00 1.73
4192 6564 7.057894 TGAACAAACCACCAGAGTTAAATAGT 58.942 34.615 0.00 0.00 0.00 2.12
4193 6565 7.227910 TGAACAAACCACCAGAGTTAAATAGTC 59.772 37.037 0.00 0.00 0.00 2.59
4194 6566 6.597562 ACAAACCACCAGAGTTAAATAGTCA 58.402 36.000 0.00 0.00 0.00 3.41
4195 6567 6.710744 ACAAACCACCAGAGTTAAATAGTCAG 59.289 38.462 0.00 0.00 0.00 3.51
4196 6568 6.435292 AACCACCAGAGTTAAATAGTCAGT 57.565 37.500 0.00 0.00 0.00 3.41
4197 6569 5.794894 ACCACCAGAGTTAAATAGTCAGTG 58.205 41.667 0.00 0.00 34.74 3.66
4198 6570 4.631813 CCACCAGAGTTAAATAGTCAGTGC 59.368 45.833 0.00 0.00 34.14 4.40
4199 6571 5.237815 CACCAGAGTTAAATAGTCAGTGCA 58.762 41.667 0.00 0.00 30.68 4.57
4200 6572 5.120830 CACCAGAGTTAAATAGTCAGTGCAC 59.879 44.000 9.40 9.40 30.68 4.57
4201 6573 5.221641 ACCAGAGTTAAATAGTCAGTGCACA 60.222 40.000 21.04 0.00 0.00 4.57
4202 6574 5.877012 CCAGAGTTAAATAGTCAGTGCACAT 59.123 40.000 21.04 0.00 0.00 3.21
4203 6575 7.041721 CCAGAGTTAAATAGTCAGTGCACATA 58.958 38.462 21.04 2.90 0.00 2.29
4204 6576 7.010552 CCAGAGTTAAATAGTCAGTGCACATAC 59.989 40.741 21.04 16.04 0.00 2.39
4205 6577 7.545615 CAGAGTTAAATAGTCAGTGCACATACA 59.454 37.037 21.04 7.71 0.00 2.29
4206 6578 8.260818 AGAGTTAAATAGTCAGTGCACATACAT 58.739 33.333 21.04 9.51 0.00 2.29
4207 6579 8.792830 AGTTAAATAGTCAGTGCACATACATT 57.207 30.769 21.04 14.11 0.00 2.71
4208 6580 9.231297 AGTTAAATAGTCAGTGCACATACATTT 57.769 29.630 21.04 21.12 0.00 2.32
4209 6581 9.840427 GTTAAATAGTCAGTGCACATACATTTT 57.160 29.630 21.04 18.67 0.00 1.82
4212 6584 9.840427 AAATAGTCAGTGCACATACATTTTAAC 57.160 29.630 21.04 1.81 0.00 2.01
4213 6585 6.875948 AGTCAGTGCACATACATTTTAACA 57.124 33.333 21.04 0.00 0.00 2.41
4214 6586 7.270757 AGTCAGTGCACATACATTTTAACAA 57.729 32.000 21.04 0.00 0.00 2.83
4215 6587 7.711846 AGTCAGTGCACATACATTTTAACAAA 58.288 30.769 21.04 0.00 0.00 2.83
4216 6588 7.647715 AGTCAGTGCACATACATTTTAACAAAC 59.352 33.333 21.04 0.00 0.00 2.93
4217 6589 6.920758 TCAGTGCACATACATTTTAACAAACC 59.079 34.615 21.04 0.00 0.00 3.27
4218 6590 6.699204 CAGTGCACATACATTTTAACAAACCA 59.301 34.615 21.04 0.00 0.00 3.67
4219 6591 6.699642 AGTGCACATACATTTTAACAAACCAC 59.300 34.615 21.04 0.00 0.00 4.16
4220 6592 5.687730 TGCACATACATTTTAACAAACCACG 59.312 36.000 0.00 0.00 0.00 4.94
4221 6593 5.387958 GCACATACATTTTAACAAACCACGC 60.388 40.000 0.00 0.00 0.00 5.34
4222 6594 5.687730 CACATACATTTTAACAAACCACGCA 59.312 36.000 0.00 0.00 0.00 5.24
4223 6595 5.918011 ACATACATTTTAACAAACCACGCAG 59.082 36.000 0.00 0.00 0.00 5.18
4224 6596 4.640789 ACATTTTAACAAACCACGCAGA 57.359 36.364 0.00 0.00 0.00 4.26
4225 6597 4.606961 ACATTTTAACAAACCACGCAGAG 58.393 39.130 0.00 0.00 0.00 3.35
4226 6598 4.097286 ACATTTTAACAAACCACGCAGAGT 59.903 37.500 0.00 0.00 0.00 3.24
4227 6599 4.705337 TTTTAACAAACCACGCAGAGTT 57.295 36.364 0.00 0.00 0.00 3.01
4228 6600 5.814764 TTTTAACAAACCACGCAGAGTTA 57.185 34.783 0.00 0.00 0.00 2.24
4229 6601 5.814764 TTTAACAAACCACGCAGAGTTAA 57.185 34.783 0.00 0.00 31.78 2.01
4230 6602 3.963383 AACAAACCACGCAGAGTTAAG 57.037 42.857 0.00 0.00 0.00 1.85
4231 6603 2.914059 ACAAACCACGCAGAGTTAAGT 58.086 42.857 0.00 0.00 0.00 2.24
4232 6604 4.062677 ACAAACCACGCAGAGTTAAGTA 57.937 40.909 0.00 0.00 0.00 2.24
4233 6605 4.056050 ACAAACCACGCAGAGTTAAGTAG 58.944 43.478 0.00 0.00 0.00 2.57
4234 6606 4.056050 CAAACCACGCAGAGTTAAGTAGT 58.944 43.478 0.00 0.00 0.00 2.73
4235 6607 4.332428 AACCACGCAGAGTTAAGTAGTT 57.668 40.909 0.00 0.00 0.00 2.24
4236 6608 3.650139 ACCACGCAGAGTTAAGTAGTTG 58.350 45.455 0.00 0.00 0.00 3.16
4237 6609 2.412089 CCACGCAGAGTTAAGTAGTTGC 59.588 50.000 0.00 4.60 0.00 4.17
4238 6610 3.318017 CACGCAGAGTTAAGTAGTTGCT 58.682 45.455 10.43 0.00 0.00 3.91
4239 6611 4.482386 CACGCAGAGTTAAGTAGTTGCTA 58.518 43.478 10.43 0.00 0.00 3.49
4240 6612 4.323868 CACGCAGAGTTAAGTAGTTGCTAC 59.676 45.833 10.43 0.00 37.23 3.58
4241 6613 4.022589 ACGCAGAGTTAAGTAGTTGCTACA 60.023 41.667 8.72 0.00 39.22 2.74
4242 6614 4.323868 CGCAGAGTTAAGTAGTTGCTACAC 59.676 45.833 8.72 0.00 39.22 2.90
4266 6638 9.056005 CACAAATAGTTGGATAGCATAAGCTAA 57.944 33.333 7.93 0.00 46.38 3.09
4287 6683 5.596836 AAACACAAATTCTTCAAGGCTCA 57.403 34.783 0.00 0.00 0.00 4.26
4288 6684 5.596836 AACACAAATTCTTCAAGGCTCAA 57.403 34.783 0.00 0.00 0.00 3.02
4297 6693 1.600636 CAAGGCTCAAACCGCTGGA 60.601 57.895 1.50 0.00 33.69 3.86
4308 6704 1.303236 CCGCTGGACAATCCACCAA 60.303 57.895 0.00 0.00 42.67 3.67
4386 6782 2.100584 TGTTGCCAACTGAACATTCACC 59.899 45.455 9.30 0.00 32.90 4.02
4392 6788 2.554032 CAACTGAACATTCACCCTCACC 59.446 50.000 0.00 0.00 32.90 4.02
4393 6789 2.057922 ACTGAACATTCACCCTCACCT 58.942 47.619 0.00 0.00 32.90 4.00
4396 6792 2.224523 TGAACATTCACCCTCACCTGTC 60.225 50.000 0.00 0.00 31.01 3.51
4442 6838 0.026027 CTTCGAATCTTGAGCAGCGC 59.974 55.000 0.00 0.00 0.00 5.92
4443 6839 0.670239 TTCGAATCTTGAGCAGCGCA 60.670 50.000 11.47 0.00 0.00 6.09
4554 6953 3.258372 TCTGATCCTACACGCACTTCTTT 59.742 43.478 0.00 0.00 0.00 2.52
4761 7160 3.124636 ACACACAAACTGTTCTCGAACAC 59.875 43.478 8.32 0.00 45.42 3.32
4816 7215 6.091305 TGCTAAGAGTGATCAATTCTTTGTCG 59.909 38.462 21.93 12.91 33.51 4.35
4849 7248 6.156083 CCTCTCCCTCTTCTATTTTCAGTTCT 59.844 42.308 0.00 0.00 0.00 3.01
4850 7249 7.343316 CCTCTCCCTCTTCTATTTTCAGTTCTA 59.657 40.741 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.850345 TCTCTCTCTCCCTCCCTCTTC 59.150 57.143 0.00 0.00 0.00 2.87
1 2 1.852965 CTCTCTCTCTCCCTCCCTCTT 59.147 57.143 0.00 0.00 0.00 2.85
2 3 1.275002 ACTCTCTCTCTCCCTCCCTCT 60.275 57.143 0.00 0.00 0.00 3.69
3 4 1.133792 CACTCTCTCTCTCCCTCCCTC 60.134 61.905 0.00 0.00 0.00 4.30
4 5 0.926293 CACTCTCTCTCTCCCTCCCT 59.074 60.000 0.00 0.00 0.00 4.20
6 7 1.005450 ACACACTCTCTCTCTCCCTCC 59.995 57.143 0.00 0.00 0.00 4.30
8 9 1.427368 ACACACACTCTCTCTCTCCCT 59.573 52.381 0.00 0.00 0.00 4.20
9 10 1.543802 CACACACACTCTCTCTCTCCC 59.456 57.143 0.00 0.00 0.00 4.30
10 11 2.030363 CACACACACACTCTCTCTCTCC 60.030 54.545 0.00 0.00 0.00 3.71
11 12 2.621055 ACACACACACACTCTCTCTCTC 59.379 50.000 0.00 0.00 0.00 3.20
12 13 2.360483 CACACACACACACTCTCTCTCT 59.640 50.000 0.00 0.00 0.00 3.10
13 14 2.099921 ACACACACACACACTCTCTCTC 59.900 50.000 0.00 0.00 0.00 3.20
14 15 2.099921 GACACACACACACACTCTCTCT 59.900 50.000 0.00 0.00 0.00 3.10
15 16 2.464865 GACACACACACACACTCTCTC 58.535 52.381 0.00 0.00 0.00 3.20
16 17 1.137086 GGACACACACACACACTCTCT 59.863 52.381 0.00 0.00 0.00 3.10
17 18 1.571919 GGACACACACACACACTCTC 58.428 55.000 0.00 0.00 0.00 3.20
18 19 0.179111 CGGACACACACACACACTCT 60.179 55.000 0.00 0.00 0.00 3.24
19 20 0.179121 TCGGACACACACACACACTC 60.179 55.000 0.00 0.00 0.00 3.51
20 21 0.179111 CTCGGACACACACACACACT 60.179 55.000 0.00 0.00 0.00 3.55
21 22 1.151777 CCTCGGACACACACACACAC 61.152 60.000 0.00 0.00 0.00 3.82
22 23 1.142965 CCTCGGACACACACACACA 59.857 57.895 0.00 0.00 0.00 3.72
23 24 0.033504 ATCCTCGGACACACACACAC 59.966 55.000 0.00 0.00 0.00 3.82
24 25 0.756294 AATCCTCGGACACACACACA 59.244 50.000 0.00 0.00 0.00 3.72
25 26 1.531149 CAAATCCTCGGACACACACAC 59.469 52.381 0.00 0.00 0.00 3.82
26 27 1.414550 TCAAATCCTCGGACACACACA 59.585 47.619 0.00 0.00 0.00 3.72
27 28 2.163818 TCAAATCCTCGGACACACAC 57.836 50.000 0.00 0.00 0.00 3.82
28 29 2.615240 CCATCAAATCCTCGGACACACA 60.615 50.000 0.00 0.00 0.00 3.72
29 30 2.009774 CCATCAAATCCTCGGACACAC 58.990 52.381 0.00 0.00 0.00 3.82
30 31 1.628340 ACCATCAAATCCTCGGACACA 59.372 47.619 0.00 0.00 0.00 3.72
31 32 2.403252 ACCATCAAATCCTCGGACAC 57.597 50.000 0.00 0.00 0.00 3.67
32 33 4.561500 TTTACCATCAAATCCTCGGACA 57.438 40.909 0.00 0.00 0.00 4.02
33 34 5.890424 TTTTTACCATCAAATCCTCGGAC 57.110 39.130 0.00 0.00 0.00 4.79
52 53 2.306847 AGTGACATTGGCGACCTTTTT 58.693 42.857 0.00 0.00 0.00 1.94
53 54 1.981256 AGTGACATTGGCGACCTTTT 58.019 45.000 0.00 0.00 0.00 2.27
54 55 1.608590 CAAGTGACATTGGCGACCTTT 59.391 47.619 0.00 0.00 0.00 3.11
55 56 1.202758 TCAAGTGACATTGGCGACCTT 60.203 47.619 0.00 0.00 0.00 3.50
56 57 0.396435 TCAAGTGACATTGGCGACCT 59.604 50.000 0.00 0.00 0.00 3.85
57 58 1.453155 ATCAAGTGACATTGGCGACC 58.547 50.000 0.00 0.00 0.00 4.79
58 59 3.623060 ACATATCAAGTGACATTGGCGAC 59.377 43.478 0.00 0.00 0.00 5.19
59 60 3.872696 ACATATCAAGTGACATTGGCGA 58.127 40.909 0.00 0.00 0.00 5.54
60 61 5.466393 TCATACATATCAAGTGACATTGGCG 59.534 40.000 0.00 0.00 0.00 5.69
61 62 6.707608 TCTCATACATATCAAGTGACATTGGC 59.292 38.462 0.00 0.00 0.00 4.52
62 63 8.667076 TTCTCATACATATCAAGTGACATTGG 57.333 34.615 0.00 0.00 0.00 3.16
116 117 8.528643 GGGCCACATTAACTTTAAGAGTTTAAT 58.471 33.333 4.39 0.00 46.34 1.40
117 118 7.039574 GGGGCCACATTAACTTTAAGAGTTTAA 60.040 37.037 4.39 0.00 46.34 1.52
118 119 6.434965 GGGGCCACATTAACTTTAAGAGTTTA 59.565 38.462 4.39 1.80 46.34 2.01
119 120 5.245301 GGGGCCACATTAACTTTAAGAGTTT 59.755 40.000 4.39 0.00 46.34 2.66
121 122 4.341487 GGGGCCACATTAACTTTAAGAGT 58.659 43.478 4.39 0.00 41.47 3.24
122 123 3.377172 CGGGGCCACATTAACTTTAAGAG 59.623 47.826 5.46 0.00 0.00 2.85
123 124 3.244981 ACGGGGCCACATTAACTTTAAGA 60.245 43.478 5.46 0.00 0.00 2.10
124 125 3.086282 ACGGGGCCACATTAACTTTAAG 58.914 45.455 5.46 0.00 0.00 1.85
125 126 3.157750 ACGGGGCCACATTAACTTTAA 57.842 42.857 5.46 0.00 0.00 1.52
126 127 2.820787 CAACGGGGCCACATTAACTTTA 59.179 45.455 5.46 0.00 0.00 1.85
127 128 1.616374 CAACGGGGCCACATTAACTTT 59.384 47.619 5.46 0.00 0.00 2.66
128 129 1.253100 CAACGGGGCCACATTAACTT 58.747 50.000 5.46 0.00 0.00 2.66
129 130 1.248101 GCAACGGGGCCACATTAACT 61.248 55.000 5.46 0.00 0.00 2.24
130 131 1.214325 GCAACGGGGCCACATTAAC 59.786 57.895 5.46 0.00 0.00 2.01
131 132 0.827925 TTGCAACGGGGCCACATTAA 60.828 50.000 5.46 0.00 0.00 1.40
132 133 0.613292 ATTGCAACGGGGCCACATTA 60.613 50.000 5.46 0.00 0.00 1.90
133 134 1.912763 ATTGCAACGGGGCCACATT 60.913 52.632 5.46 0.00 0.00 2.71
134 135 2.283821 ATTGCAACGGGGCCACAT 60.284 55.556 5.46 0.00 0.00 3.21
135 136 3.301554 CATTGCAACGGGGCCACA 61.302 61.111 5.46 0.00 0.00 4.17
136 137 4.740431 GCATTGCAACGGGGCCAC 62.740 66.667 4.39 0.00 0.00 5.01
138 139 4.740431 GTGCATTGCAACGGGGCC 62.740 66.667 13.94 0.00 41.47 5.80
140 141 4.418401 CCGTGCATTGCAACGGGG 62.418 66.667 29.18 18.75 43.66 5.73
144 145 3.839642 AACGCCCGTGCATTGCAAC 62.840 57.895 13.94 7.00 41.47 4.17
145 146 3.550339 GAACGCCCGTGCATTGCAA 62.550 57.895 13.94 0.00 41.47 4.08
146 147 4.036804 GAACGCCCGTGCATTGCA 62.037 61.111 7.38 7.38 37.32 4.08
147 148 3.267597 AAGAACGCCCGTGCATTGC 62.268 57.895 0.46 0.46 37.32 3.56
148 149 1.154225 GAAGAACGCCCGTGCATTG 60.154 57.895 1.17 0.00 37.32 2.82
149 150 0.036765 TAGAAGAACGCCCGTGCATT 60.037 50.000 1.17 0.00 37.32 3.56
150 151 0.460284 CTAGAAGAACGCCCGTGCAT 60.460 55.000 1.17 0.00 37.32 3.96
151 152 1.080093 CTAGAAGAACGCCCGTGCA 60.080 57.895 1.17 0.00 37.32 4.57
152 153 0.171903 TACTAGAAGAACGCCCGTGC 59.828 55.000 0.00 0.00 0.00 5.34
153 154 1.468736 GGTACTAGAAGAACGCCCGTG 60.469 57.143 0.00 0.00 0.00 4.94
154 155 0.813821 GGTACTAGAAGAACGCCCGT 59.186 55.000 0.00 0.00 0.00 5.28
155 156 0.813184 TGGTACTAGAAGAACGCCCG 59.187 55.000 0.00 0.00 0.00 6.13
156 157 1.823610 ACTGGTACTAGAAGAACGCCC 59.176 52.381 13.86 0.00 0.00 6.13
157 158 2.230750 ACACTGGTACTAGAAGAACGCC 59.769 50.000 13.86 0.00 0.00 5.68
158 159 3.572604 ACACTGGTACTAGAAGAACGC 57.427 47.619 13.86 0.00 0.00 4.84
159 160 6.361748 GTGTTTACACTGGTACTAGAAGAACG 59.638 42.308 13.86 0.00 43.25 3.95
160 161 6.361748 CGTGTTTACACTGGTACTAGAAGAAC 59.638 42.308 13.86 11.51 44.34 3.01
161 162 6.441274 CGTGTTTACACTGGTACTAGAAGAA 58.559 40.000 13.86 0.73 44.34 2.52
162 163 5.048504 CCGTGTTTACACTGGTACTAGAAGA 60.049 44.000 13.86 0.00 44.34 2.87
163 164 5.048504 TCCGTGTTTACACTGGTACTAGAAG 60.049 44.000 13.86 7.49 44.34 2.85
164 165 4.826733 TCCGTGTTTACACTGGTACTAGAA 59.173 41.667 13.86 0.00 44.34 2.10
165 166 4.397420 TCCGTGTTTACACTGGTACTAGA 58.603 43.478 13.86 0.00 44.34 2.43
166 167 4.771590 TCCGTGTTTACACTGGTACTAG 57.228 45.455 17.23 4.44 44.34 2.57
167 168 5.726980 ATTCCGTGTTTACACTGGTACTA 57.273 39.130 17.23 0.00 44.34 1.82
168 169 4.612264 ATTCCGTGTTTACACTGGTACT 57.388 40.909 17.23 6.72 44.34 2.73
169 170 5.678132 AAATTCCGTGTTTACACTGGTAC 57.322 39.130 17.23 0.00 44.34 3.34
170 171 6.696441 AAAAATTCCGTGTTTACACTGGTA 57.304 33.333 17.23 11.81 44.34 3.25
171 172 5.585820 AAAAATTCCGTGTTTACACTGGT 57.414 34.783 17.23 3.86 44.34 4.00
192 193 7.094508 TGAAATACTCTGTTTTGACAGCAAA 57.905 32.000 1.78 0.00 41.97 3.68
193 194 6.691754 TGAAATACTCTGTTTTGACAGCAA 57.308 33.333 1.78 0.00 37.63 3.91
194 195 6.691754 TTGAAATACTCTGTTTTGACAGCA 57.308 33.333 1.78 0.00 37.63 4.41
195 196 8.721478 TCTATTGAAATACTCTGTTTTGACAGC 58.279 33.333 1.78 0.00 37.63 4.40
197 198 9.778741 AGTCTATTGAAATACTCTGTTTTGACA 57.221 29.630 0.00 0.00 0.00 3.58
199 200 9.219603 CCAGTCTATTGAAATACTCTGTTTTGA 57.780 33.333 0.00 0.00 0.00 2.69
200 201 7.965107 GCCAGTCTATTGAAATACTCTGTTTTG 59.035 37.037 0.00 0.00 0.00 2.44
201 202 7.121315 GGCCAGTCTATTGAAATACTCTGTTTT 59.879 37.037 0.00 0.00 0.00 2.43
202 203 6.599638 GGCCAGTCTATTGAAATACTCTGTTT 59.400 38.462 0.00 0.00 0.00 2.83
203 204 6.116126 GGCCAGTCTATTGAAATACTCTGTT 58.884 40.000 0.00 0.00 0.00 3.16
204 205 5.396884 GGGCCAGTCTATTGAAATACTCTGT 60.397 44.000 4.39 0.00 0.00 3.41
205 206 5.059833 GGGCCAGTCTATTGAAATACTCTG 58.940 45.833 4.39 0.00 0.00 3.35
206 207 4.971924 AGGGCCAGTCTATTGAAATACTCT 59.028 41.667 6.18 0.00 0.00 3.24
207 208 5.297569 AGGGCCAGTCTATTGAAATACTC 57.702 43.478 6.18 0.00 0.00 2.59
208 209 4.103311 GGAGGGCCAGTCTATTGAAATACT 59.897 45.833 6.18 0.00 0.00 2.12
209 210 4.390264 GGAGGGCCAGTCTATTGAAATAC 58.610 47.826 6.18 0.00 0.00 1.89
210 211 3.394606 GGGAGGGCCAGTCTATTGAAATA 59.605 47.826 6.18 0.00 35.15 1.40
211 212 2.175715 GGGAGGGCCAGTCTATTGAAAT 59.824 50.000 6.18 0.00 35.15 2.17
212 213 1.564348 GGGAGGGCCAGTCTATTGAAA 59.436 52.381 6.18 0.00 35.15 2.69
213 214 1.213296 GGGAGGGCCAGTCTATTGAA 58.787 55.000 6.18 0.00 35.15 2.69
214 215 0.343372 AGGGAGGGCCAGTCTATTGA 59.657 55.000 6.18 0.00 35.15 2.57
215 216 2.103153 TAGGGAGGGCCAGTCTATTG 57.897 55.000 6.18 0.00 35.15 1.90
216 217 2.889522 TTAGGGAGGGCCAGTCTATT 57.110 50.000 6.18 0.00 35.15 1.73
217 218 3.368921 AATTAGGGAGGGCCAGTCTAT 57.631 47.619 6.18 0.00 35.15 1.98
218 219 2.889522 AATTAGGGAGGGCCAGTCTA 57.110 50.000 6.18 0.57 35.15 2.59
219 220 2.695585 CTAATTAGGGAGGGCCAGTCT 58.304 52.381 6.18 1.66 35.15 3.24
220 221 1.700186 CCTAATTAGGGAGGGCCAGTC 59.300 57.143 22.09 0.00 39.86 3.51
221 222 1.821088 CCTAATTAGGGAGGGCCAGT 58.179 55.000 22.09 0.00 39.86 4.00
232 233 7.184779 GGCTAAACGTTGCTAAACCTAATTAG 58.815 38.462 0.00 5.43 36.24 1.73
233 234 6.093909 GGGCTAAACGTTGCTAAACCTAATTA 59.906 38.462 0.00 0.00 32.23 1.40
234 235 5.106038 GGGCTAAACGTTGCTAAACCTAATT 60.106 40.000 0.00 0.00 32.23 1.40
235 236 4.397103 GGGCTAAACGTTGCTAAACCTAAT 59.603 41.667 0.00 0.00 32.23 1.73
236 237 3.752747 GGGCTAAACGTTGCTAAACCTAA 59.247 43.478 0.00 0.00 32.23 2.69
237 238 3.008266 AGGGCTAAACGTTGCTAAACCTA 59.992 43.478 0.00 0.00 32.23 3.08
238 239 2.156917 GGGCTAAACGTTGCTAAACCT 58.843 47.619 0.00 0.00 32.23 3.50
239 240 2.156917 AGGGCTAAACGTTGCTAAACC 58.843 47.619 0.00 0.00 32.23 3.27
240 241 2.161012 GGAGGGCTAAACGTTGCTAAAC 59.839 50.000 0.00 0.00 0.00 2.01
241 242 2.429478 GGAGGGCTAAACGTTGCTAAA 58.571 47.619 0.00 0.00 0.00 1.85
242 243 1.339342 GGGAGGGCTAAACGTTGCTAA 60.339 52.381 0.00 0.00 0.00 3.09
243 244 0.251073 GGGAGGGCTAAACGTTGCTA 59.749 55.000 0.00 0.00 0.00 3.49
244 245 1.002502 GGGAGGGCTAAACGTTGCT 60.003 57.895 0.00 0.00 0.00 3.91
245 246 2.044555 GGGGAGGGCTAAACGTTGC 61.045 63.158 0.00 0.94 0.00 4.17
246 247 0.034477 ATGGGGAGGGCTAAACGTTG 60.034 55.000 0.00 0.00 0.00 4.10
247 248 0.702316 AATGGGGAGGGCTAAACGTT 59.298 50.000 0.00 0.00 0.00 3.99
248 249 0.034477 CAATGGGGAGGGCTAAACGT 60.034 55.000 0.00 0.00 0.00 3.99
249 250 0.751643 CCAATGGGGAGGGCTAAACG 60.752 60.000 0.00 0.00 40.01 3.60
250 251 0.629058 TCCAATGGGGAGGGCTAAAC 59.371 55.000 0.00 0.00 42.15 2.01
251 252 3.129131 TCCAATGGGGAGGGCTAAA 57.871 52.632 0.00 0.00 42.15 1.85
252 253 4.954595 TCCAATGGGGAGGGCTAA 57.045 55.556 0.00 0.00 42.15 3.09
260 261 0.832626 GCCAGGAAAATCCAATGGGG 59.167 55.000 0.00 0.00 39.61 4.96
261 262 1.758862 GAGCCAGGAAAATCCAATGGG 59.241 52.381 0.00 1.01 39.61 4.00
262 263 1.758862 GGAGCCAGGAAAATCCAATGG 59.241 52.381 0.00 0.00 39.61 3.16
263 264 1.406539 CGGAGCCAGGAAAATCCAATG 59.593 52.381 0.00 0.00 39.61 2.82
264 265 1.767759 CGGAGCCAGGAAAATCCAAT 58.232 50.000 0.00 0.00 39.61 3.16
265 266 3.264574 CGGAGCCAGGAAAATCCAA 57.735 52.632 0.00 0.00 39.61 3.53
279 280 4.742201 CCGTGGTCAGTGGCGGAG 62.742 72.222 9.58 0.00 46.33 4.63
316 317 4.512914 GATCCAGGCACCCCAGGC 62.513 72.222 0.00 0.00 37.68 4.85
317 318 2.914734 TAGGATCCAGGCACCCCAGG 62.915 65.000 15.82 0.00 39.08 4.45
318 319 0.988145 TTAGGATCCAGGCACCCCAG 60.988 60.000 15.82 0.00 0.00 4.45
319 320 1.083895 TTAGGATCCAGGCACCCCA 59.916 57.895 15.82 0.00 0.00 4.96
330 331 5.500290 CGCAAACAACGTCATAGTTAGGATC 60.500 44.000 0.00 0.00 32.35 3.36
365 366 4.717877 ACACATGATCCACAGTCTTTCAA 58.282 39.130 0.00 0.00 0.00 2.69
411 412 1.123928 CGGAGGAGGAAAGCATACCT 58.876 55.000 0.00 0.00 39.41 3.08
451 452 3.127548 GCCATCAAACTCCATATATGGCG 59.872 47.826 24.74 21.47 46.90 5.69
467 468 3.080765 ATCCCGGACACGCCATCA 61.081 61.111 0.73 0.00 39.22 3.07
483 484 1.767759 AAATTTAGCCGAGGCAGCAT 58.232 45.000 17.18 1.66 44.88 3.79
485 486 3.315191 TGATAAAATTTAGCCGAGGCAGC 59.685 43.478 17.18 0.00 44.88 5.25
489 490 7.026631 TGTCATTGATAAAATTTAGCCGAGG 57.973 36.000 0.00 0.00 0.00 4.63
498 499 9.853555 TGCGAAGTTATTGTCATTGATAAAATT 57.146 25.926 0.00 0.00 0.00 1.82
504 505 6.183360 ACGAATGCGAAGTTATTGTCATTGAT 60.183 34.615 0.00 0.00 41.64 2.57
509 510 6.469139 TTAACGAATGCGAAGTTATTGTCA 57.531 33.333 0.00 0.00 41.64 3.58
529 530 8.098912 ACTTTCCGGATCTTTAAAGTAGCTTAA 58.901 33.333 13.94 2.68 39.67 1.85
542 543 5.992217 GCTGATATACAACTTTCCGGATCTT 59.008 40.000 4.15 0.00 0.00 2.40
568 569 4.135153 AGCTCGACGCGGCTTCAT 62.135 61.111 11.76 0.00 45.59 2.57
571 572 4.785512 CTCAGCTCGACGCGGCTT 62.786 66.667 11.76 0.00 45.59 4.35
586 587 4.614702 GCAATCAAGAAAAAGAGTTCGCTC 59.385 41.667 0.00 0.00 44.41 5.03
612 613 6.490040 CCATAGGACAAGACAAGAAGGAAAAA 59.510 38.462 0.00 0.00 0.00 1.94
616 617 3.055094 GCCATAGGACAAGACAAGAAGGA 60.055 47.826 0.00 0.00 0.00 3.36
621 622 3.356529 AAGGCCATAGGACAAGACAAG 57.643 47.619 5.01 0.00 29.21 3.16
632 633 5.415701 ACACACAACTCATAAAAGGCCATAG 59.584 40.000 5.01 0.00 0.00 2.23
638 639 6.151691 CCAATCACACACAACTCATAAAAGG 58.848 40.000 0.00 0.00 0.00 3.11
639 640 5.630680 GCCAATCACACACAACTCATAAAAG 59.369 40.000 0.00 0.00 0.00 2.27
644 645 1.536766 CGCCAATCACACACAACTCAT 59.463 47.619 0.00 0.00 0.00 2.90
655 656 3.846754 GCACAAAGCGCCAATCAC 58.153 55.556 2.29 0.00 0.00 3.06
872 874 4.777463 AGGAAAAACCAAGAGACGAGAAA 58.223 39.130 0.00 0.00 42.04 2.52
877 883 2.552743 GGGAAGGAAAAACCAAGAGACG 59.447 50.000 0.00 0.00 42.04 4.18
878 884 2.891580 GGGGAAGGAAAAACCAAGAGAC 59.108 50.000 0.00 0.00 42.04 3.36
883 889 3.964688 GAGAAAGGGGAAGGAAAAACCAA 59.035 43.478 0.00 0.00 42.04 3.67
896 902 0.386113 GACGAGATCGGAGAAAGGGG 59.614 60.000 7.22 0.00 43.58 4.79
933 945 4.815973 TGGGAGTGGGGATCCGGG 62.816 72.222 5.45 0.00 37.75 5.73
938 950 1.076777 CGCATTTGGGAGTGGGGAT 60.077 57.895 0.00 0.00 0.00 3.85
941 962 1.439353 CGATCGCATTTGGGAGTGGG 61.439 60.000 0.26 0.00 40.39 4.61
944 965 1.869754 CGATCGATCGCATTTGGGAGT 60.870 52.381 32.34 0.00 43.84 3.85
945 966 0.786581 CGATCGATCGCATTTGGGAG 59.213 55.000 32.34 5.11 43.84 4.30
977 998 1.554160 CTCCTCAATCAGTCAGCCAGT 59.446 52.381 0.00 0.00 0.00 4.00
981 1002 0.174389 TCGCTCCTCAATCAGTCAGC 59.826 55.000 0.00 0.00 0.00 4.26
985 1006 0.179062 GCCATCGCTCCTCAATCAGT 60.179 55.000 0.00 0.00 0.00 3.41
996 1017 4.570663 GTCGTAGCCGCCATCGCT 62.571 66.667 0.00 0.00 0.00 4.93
998 1019 4.246206 TCGTCGTAGCCGCCATCG 62.246 66.667 0.00 0.00 0.00 3.84
999 1020 2.353607 CTCGTCGTAGCCGCCATC 60.354 66.667 0.00 0.00 0.00 3.51
1000 1021 3.900892 CCTCGTCGTAGCCGCCAT 61.901 66.667 0.00 0.00 0.00 4.40
1080 1106 0.835941 AGGTGATGTGATGAGGAGGC 59.164 55.000 0.00 0.00 0.00 4.70
1106 1132 8.727149 GGGATGAGGGGAAATTGATCATATATA 58.273 37.037 0.00 0.00 30.98 0.86
1107 1133 7.186965 TGGGATGAGGGGAAATTGATCATATAT 59.813 37.037 0.00 0.00 30.98 0.86
1108 1134 6.508561 TGGGATGAGGGGAAATTGATCATATA 59.491 38.462 0.00 0.00 30.98 0.86
1109 1135 5.316722 TGGGATGAGGGGAAATTGATCATAT 59.683 40.000 0.00 0.00 30.98 1.78
1110 1136 4.669290 TGGGATGAGGGGAAATTGATCATA 59.331 41.667 0.00 0.00 30.98 2.15
1111 1137 3.468244 TGGGATGAGGGGAAATTGATCAT 59.532 43.478 0.00 0.00 33.44 2.45
1117 1143 2.448577 GGAGATGGGATGAGGGGAAATT 59.551 50.000 0.00 0.00 0.00 1.82
1128 1154 2.040464 ACGCAGGGGAGATGGGAT 60.040 61.111 0.00 0.00 34.87 3.85
1140 1166 0.667993 GAGAGAGATGGGAGACGCAG 59.332 60.000 0.00 0.00 0.00 5.18
1141 1167 0.753479 GGAGAGAGATGGGAGACGCA 60.753 60.000 0.00 0.00 0.00 5.24
1142 1168 1.460273 GGGAGAGAGATGGGAGACGC 61.460 65.000 0.00 0.00 0.00 5.19
1143 1169 0.825840 GGGGAGAGAGATGGGAGACG 60.826 65.000 0.00 0.00 0.00 4.18
1144 1170 0.471022 GGGGGAGAGAGATGGGAGAC 60.471 65.000 0.00 0.00 0.00 3.36
1145 1171 0.931250 TGGGGGAGAGAGATGGGAGA 60.931 60.000 0.00 0.00 0.00 3.71
1146 1172 0.030705 TTGGGGGAGAGAGATGGGAG 60.031 60.000 0.00 0.00 0.00 4.30
1147 1173 0.326618 GTTGGGGGAGAGAGATGGGA 60.327 60.000 0.00 0.00 0.00 4.37
1148 1174 1.348775 GGTTGGGGGAGAGAGATGGG 61.349 65.000 0.00 0.00 0.00 4.00
1149 1175 1.348775 GGGTTGGGGGAGAGAGATGG 61.349 65.000 0.00 0.00 0.00 3.51
1162 1188 4.408182 AGACATAATTCGAGAGGGTTGG 57.592 45.455 0.00 0.00 0.00 3.77
1163 1189 4.811557 GGAAGACATAATTCGAGAGGGTTG 59.188 45.833 0.00 0.00 0.00 3.77
1164 1190 4.717280 AGGAAGACATAATTCGAGAGGGTT 59.283 41.667 0.00 0.00 0.00 4.11
1165 1191 4.290942 AGGAAGACATAATTCGAGAGGGT 58.709 43.478 0.00 0.00 0.00 4.34
1166 1192 4.946478 AGGAAGACATAATTCGAGAGGG 57.054 45.455 0.00 0.00 0.00 4.30
1168 1194 4.912766 GCGTAGGAAGACATAATTCGAGAG 59.087 45.833 0.00 0.00 0.00 3.20
1169 1195 4.337274 TGCGTAGGAAGACATAATTCGAGA 59.663 41.667 0.00 0.00 0.00 4.04
1172 1198 4.376413 GCATGCGTAGGAAGACATAATTCG 60.376 45.833 0.00 0.00 0.00 3.34
1173 1199 4.511454 TGCATGCGTAGGAAGACATAATTC 59.489 41.667 14.09 0.00 0.00 2.17
1174 1200 4.450976 TGCATGCGTAGGAAGACATAATT 58.549 39.130 14.09 0.00 0.00 1.40
1175 1201 4.060900 CTGCATGCGTAGGAAGACATAAT 58.939 43.478 14.09 0.00 0.00 1.28
1178 1204 1.208052 ACTGCATGCGTAGGAAGACAT 59.792 47.619 14.09 0.00 0.00 3.06
1179 1205 0.608130 ACTGCATGCGTAGGAAGACA 59.392 50.000 14.09 0.00 0.00 3.41
1205 1270 6.024049 CGCATGGAGTTTCTAAGATGAAAAC 58.976 40.000 0.00 0.00 37.63 2.43
1213 1278 1.063174 GCAGCGCATGGAGTTTCTAAG 59.937 52.381 11.47 0.00 0.00 2.18
1227 1292 2.752322 TTCACCAAATGCAGCAGCGC 62.752 55.000 0.00 0.00 46.23 5.92
1229 1294 1.142474 GTTTCACCAAATGCAGCAGC 58.858 50.000 0.00 0.00 42.57 5.25
1248 1319 1.147473 GCCGCCAAGGAACAAATTTG 58.853 50.000 16.67 16.67 45.00 2.32
1249 1320 0.755686 TGCCGCCAAGGAACAAATTT 59.244 45.000 0.00 0.00 45.00 1.82
1267 1338 1.638133 CCAGCTCACACGAGATCTTG 58.362 55.000 8.54 8.54 42.34 3.02
1326 1404 4.656112 ACCCCTACTCCTACATCATTTCTG 59.344 45.833 0.00 0.00 0.00 3.02
1328 1406 4.743955 GCACCCCTACTCCTACATCATTTC 60.744 50.000 0.00 0.00 0.00 2.17
1342 1420 0.252197 CCACTACCTTGCACCCCTAC 59.748 60.000 0.00 0.00 0.00 3.18
1343 1421 1.559065 GCCACTACCTTGCACCCCTA 61.559 60.000 0.00 0.00 0.00 3.53
1344 1422 2.907179 GCCACTACCTTGCACCCCT 61.907 63.158 0.00 0.00 0.00 4.79
1345 1423 2.361230 GCCACTACCTTGCACCCC 60.361 66.667 0.00 0.00 0.00 4.95
1346 1424 2.741486 TTCGCCACTACCTTGCACCC 62.741 60.000 0.00 0.00 0.00 4.61
1347 1425 0.676782 ATTCGCCACTACCTTGCACC 60.677 55.000 0.00 0.00 0.00 5.01
1350 1428 1.009829 CTCATTCGCCACTACCTTGC 58.990 55.000 0.00 0.00 0.00 4.01
1375 1453 7.345691 TCTCCTGACAAATGGCTATTGAAATA 58.654 34.615 0.00 0.00 0.00 1.40
1382 1460 5.184892 AGTTTCTCCTGACAAATGGCTAT 57.815 39.130 0.00 0.00 0.00 2.97
1430 1517 7.711339 GGAAAGGTATCTACTGAAGGTTATGTG 59.289 40.741 0.00 0.00 0.00 3.21
1457 1544 3.438360 CTGTTTTGAACTGTGCTTCCAC 58.562 45.455 0.00 0.00 42.40 4.02
1463 1563 1.203065 GCTGCTGTTTTGAACTGTGC 58.797 50.000 0.00 0.00 33.43 4.57
1592 1697 2.323999 TGGAAGGAAATGTGCCCAAT 57.676 45.000 0.00 0.00 0.00 3.16
1594 1699 1.358787 AGATGGAAGGAAATGTGCCCA 59.641 47.619 0.00 0.00 0.00 5.36
1598 1703 5.336213 CCTTGTGAAGATGGAAGGAAATGTG 60.336 44.000 0.00 0.00 37.74 3.21
1615 1720 2.873170 CGTACGTACGTACCTTGTGA 57.127 50.000 38.76 14.92 45.80 3.58
1630 1735 4.053295 TGTAGAGAGCAAAACAACCGTAC 58.947 43.478 0.00 0.00 0.00 3.67
1631 1736 4.325028 TGTAGAGAGCAAAACAACCGTA 57.675 40.909 0.00 0.00 0.00 4.02
1632 1737 3.188159 TGTAGAGAGCAAAACAACCGT 57.812 42.857 0.00 0.00 0.00 4.83
1633 1738 3.997021 AGATGTAGAGAGCAAAACAACCG 59.003 43.478 0.00 0.00 0.00 4.44
1634 1739 5.121454 CAGAGATGTAGAGAGCAAAACAACC 59.879 44.000 0.00 0.00 0.00 3.77
1635 1740 5.698545 ACAGAGATGTAGAGAGCAAAACAAC 59.301 40.000 0.00 0.00 0.00 3.32
1636 1741 5.858381 ACAGAGATGTAGAGAGCAAAACAA 58.142 37.500 0.00 0.00 0.00 2.83
1637 1742 5.473931 GACAGAGATGTAGAGAGCAAAACA 58.526 41.667 0.00 0.00 0.00 2.83
1638 1743 4.560819 CGACAGAGATGTAGAGAGCAAAAC 59.439 45.833 0.00 0.00 0.00 2.43
1639 1744 4.218635 ACGACAGAGATGTAGAGAGCAAAA 59.781 41.667 0.00 0.00 0.00 2.44
1650 1755 4.017126 TGAGGAATGTACGACAGAGATGT 58.983 43.478 0.00 0.00 0.00 3.06
1651 1756 4.639135 TGAGGAATGTACGACAGAGATG 57.361 45.455 0.00 0.00 0.00 2.90
1664 1769 6.365247 CAGAGAAATTGCTTTGTTGAGGAATG 59.635 38.462 0.00 0.00 37.69 2.67
1668 1773 5.192327 ACAGAGAAATTGCTTTGTTGAGG 57.808 39.130 3.71 0.00 29.91 3.86
1675 1780 5.136105 ACAGAGGAACAGAGAAATTGCTTT 58.864 37.500 0.00 0.00 0.00 3.51
1676 1781 4.723309 ACAGAGGAACAGAGAAATTGCTT 58.277 39.130 0.00 0.00 0.00 3.91
1679 1784 4.153117 CGGAACAGAGGAACAGAGAAATTG 59.847 45.833 0.00 0.00 0.00 2.32
1682 1787 2.037251 CCGGAACAGAGGAACAGAGAAA 59.963 50.000 0.00 0.00 0.00 2.52
1691 1796 0.970937 AGAATCGCCGGAACAGAGGA 60.971 55.000 5.05 0.00 0.00 3.71
1692 1797 0.807667 CAGAATCGCCGGAACAGAGG 60.808 60.000 5.05 0.00 0.00 3.69
1693 1798 0.807667 CCAGAATCGCCGGAACAGAG 60.808 60.000 5.05 0.00 0.00 3.35
1694 1799 1.218047 CCAGAATCGCCGGAACAGA 59.782 57.895 5.05 0.00 0.00 3.41
1695 1800 0.391130 TTCCAGAATCGCCGGAACAG 60.391 55.000 5.05 0.00 33.88 3.16
1696 1801 0.251916 ATTCCAGAATCGCCGGAACA 59.748 50.000 5.05 0.00 41.45 3.18
1739 1844 9.342308 GATGGATAGTATTTCCAAATGTTGAGA 57.658 33.333 0.00 0.00 45.99 3.27
1746 1851 9.236006 GCATGTAGATGGATAGTATTTCCAAAT 57.764 33.333 1.57 0.00 45.99 2.32
1751 1856 9.929180 TTACTGCATGTAGATGGATAGTATTTC 57.071 33.333 18.40 0.00 32.08 2.17
1783 1888 3.009916 AGTCATAATCATCCATGGAGGGC 59.990 47.826 25.35 1.53 38.24 5.19
1784 1889 4.923516 AGTCATAATCATCCATGGAGGG 57.076 45.455 25.35 17.05 38.24 4.30
1793 1898 6.684555 GCAGTTTCGTTCAAGTCATAATCATC 59.315 38.462 0.00 0.00 0.00 2.92
1809 1914 3.123804 CAGTTGTGAGTAGCAGTTTCGT 58.876 45.455 0.00 0.00 0.00 3.85
1810 1915 3.381045 TCAGTTGTGAGTAGCAGTTTCG 58.619 45.455 0.00 0.00 0.00 3.46
1811 1916 5.734855 TTTCAGTTGTGAGTAGCAGTTTC 57.265 39.130 0.00 0.00 32.98 2.78
1812 1917 6.699575 AATTTCAGTTGTGAGTAGCAGTTT 57.300 33.333 0.00 0.00 32.98 2.66
1813 1918 6.498304 CAAATTTCAGTTGTGAGTAGCAGTT 58.502 36.000 0.00 0.00 32.98 3.16
1814 1919 5.506317 GCAAATTTCAGTTGTGAGTAGCAGT 60.506 40.000 0.00 0.00 32.98 4.40
1815 1920 4.913924 GCAAATTTCAGTTGTGAGTAGCAG 59.086 41.667 0.00 0.00 32.98 4.24
1836 3109 3.181451 ACAAGTCAGTGAAAGAGATGGCA 60.181 43.478 0.00 0.00 0.00 4.92
1861 3138 3.417069 TGTACAAGTGCAGCCTGTAAT 57.583 42.857 0.00 0.00 0.00 1.89
1864 3141 3.634397 ATATGTACAAGTGCAGCCTGT 57.366 42.857 0.00 0.00 0.00 4.00
1866 3143 3.955471 ACAATATGTACAAGTGCAGCCT 58.045 40.909 0.00 0.00 0.00 4.58
1867 3144 4.155826 TCAACAATATGTACAAGTGCAGCC 59.844 41.667 0.00 0.00 0.00 4.85
1905 3183 3.244044 TGCTGCATGTTGTCAGTACAGTA 60.244 43.478 0.00 0.00 36.83 2.74
1906 3184 2.146342 GCTGCATGTTGTCAGTACAGT 58.854 47.619 0.00 0.00 36.83 3.55
1928 3206 6.049955 TGGAAATACAGAGGGAAGTTAGTG 57.950 41.667 0.00 0.00 0.00 2.74
1930 3208 6.126768 TGGATGGAAATACAGAGGGAAGTTAG 60.127 42.308 0.00 0.00 0.00 2.34
1999 3277 0.541863 GGAGATGTGGTGGATTCGGT 59.458 55.000 0.00 0.00 0.00 4.69
2004 3282 4.807321 TCGGGAGATGTGGTGGAT 57.193 55.556 0.00 0.00 0.00 3.41
2655 3936 2.574929 GTGGTATCCGACACGCCA 59.425 61.111 0.00 0.00 0.00 5.69
2660 3941 1.647545 GGACGACGTGGTATCCGACA 61.648 60.000 4.58 0.00 0.00 4.35
2667 3948 1.796151 GTCATCGGACGACGTGGTA 59.204 57.895 4.58 0.00 44.69 3.25
2703 3984 2.098934 CACGATCTCTTCTAGCAGCACT 59.901 50.000 0.00 0.00 0.00 4.40
2712 3993 1.140589 CAGCGCCACGATCTCTTCT 59.859 57.895 2.29 0.00 0.00 2.85
2715 3996 3.423162 GAGCAGCGCCACGATCTCT 62.423 63.158 2.29 0.00 0.00 3.10
2845 4126 4.834453 CGCCTCCTCCAGCTGCTG 62.834 72.222 22.44 22.44 0.00 4.41
2886 4167 0.244450 CCGTGGAGTAGTTGGCGTTA 59.756 55.000 0.00 0.00 0.00 3.18
2890 4171 0.669625 GTGTCCGTGGAGTAGTTGGC 60.670 60.000 0.00 0.00 0.00 4.52
2894 4175 1.584380 GAGCGTGTCCGTGGAGTAGT 61.584 60.000 0.00 0.00 36.15 2.73
3724 5005 1.743252 GAGCTTCCGGAACAGCCTG 60.743 63.158 21.85 9.25 36.62 4.85
3861 5142 1.139734 CACATGCGACCGAGCTACT 59.860 57.895 0.00 0.00 38.13 2.57
3908 5197 1.203001 AGCGGGAAAAGATGGAACCAA 60.203 47.619 0.00 0.00 0.00 3.67
3941 5231 7.072030 GCTGTTCAAAAATGTGTACACTCTAG 58.928 38.462 25.60 11.41 0.00 2.43
3947 5237 3.628032 TCGGCTGTTCAAAAATGTGTACA 59.372 39.130 0.00 0.00 0.00 2.90
3951 5241 6.949578 AATAATCGGCTGTTCAAAAATGTG 57.050 33.333 0.00 0.00 0.00 3.21
3953 5243 7.816945 AGAAATAATCGGCTGTTCAAAAATG 57.183 32.000 0.00 0.00 0.00 2.32
3967 5260 7.919690 TCAATCAGTGCCTAAAGAAATAATCG 58.080 34.615 0.00 0.00 0.00 3.34
3979 5272 8.806429 TTTTCATCTAAATCAATCAGTGCCTA 57.194 30.769 0.00 0.00 0.00 3.93
3983 5276 8.975410 TGCTTTTTCATCTAAATCAATCAGTG 57.025 30.769 0.00 0.00 0.00 3.66
3994 5287 9.330063 CCTGTGTATATCTGCTTTTTCATCTAA 57.670 33.333 0.00 0.00 0.00 2.10
3996 5289 7.341805 ACCTGTGTATATCTGCTTTTTCATCT 58.658 34.615 0.00 0.00 0.00 2.90
3997 5290 7.559590 ACCTGTGTATATCTGCTTTTTCATC 57.440 36.000 0.00 0.00 0.00 2.92
3998 5291 7.944729 AACCTGTGTATATCTGCTTTTTCAT 57.055 32.000 0.00 0.00 0.00 2.57
3999 5292 7.759489 AAACCTGTGTATATCTGCTTTTTCA 57.241 32.000 0.00 0.00 0.00 2.69
4000 5293 7.062255 GCAAAACCTGTGTATATCTGCTTTTTC 59.938 37.037 0.00 0.00 0.00 2.29
4001 5294 6.868339 GCAAAACCTGTGTATATCTGCTTTTT 59.132 34.615 0.00 0.00 0.00 1.94
4002 5295 6.209391 AGCAAAACCTGTGTATATCTGCTTTT 59.791 34.615 0.00 0.00 34.05 2.27
4017 5310 5.063817 GCCAAAATTATGCTAGCAAAACCTG 59.936 40.000 23.54 14.16 0.00 4.00
4018 5311 5.178061 GCCAAAATTATGCTAGCAAAACCT 58.822 37.500 23.54 7.31 0.00 3.50
4019 5312 4.934602 TGCCAAAATTATGCTAGCAAAACC 59.065 37.500 23.54 4.21 0.00 3.27
4020 5313 6.073331 TGTTGCCAAAATTATGCTAGCAAAAC 60.073 34.615 23.54 12.63 40.11 2.43
4023 5316 5.144692 TGTTGCCAAAATTATGCTAGCAA 57.855 34.783 23.54 6.52 36.48 3.91
4024 5317 4.797800 TGTTGCCAAAATTATGCTAGCA 57.202 36.364 21.85 21.85 0.00 3.49
4025 5318 6.667007 ATTTGTTGCCAAAATTATGCTAGC 57.333 33.333 8.10 8.10 43.43 3.42
4044 5337 6.748333 TTTCTTCCAGACTGCATCTATTTG 57.252 37.500 0.00 0.00 35.15 2.32
4053 5346 3.254411 CCCTTCTTTTTCTTCCAGACTGC 59.746 47.826 0.00 0.00 0.00 4.40
4068 5361 1.005215 CAGTTCATGGCTCCCCTTCTT 59.995 52.381 0.00 0.00 0.00 2.52
4070 5363 1.034292 GCAGTTCATGGCTCCCCTTC 61.034 60.000 0.00 0.00 0.00 3.46
4071 5364 1.000396 GCAGTTCATGGCTCCCCTT 60.000 57.895 0.00 0.00 0.00 3.95
4075 5368 1.246056 TGCTTGCAGTTCATGGCTCC 61.246 55.000 0.00 0.00 0.00 4.70
4086 6414 5.149973 ACTCTATATCCATCTGCTTGCAG 57.850 43.478 15.74 15.74 0.00 4.41
4114 6442 7.485277 CGTGTGGTTTGTTAAAATGTTGAAGTA 59.515 33.333 0.00 0.00 0.00 2.24
4126 6454 8.436046 ACTATTTAACTCGTGTGGTTTGTTAA 57.564 30.769 0.00 0.00 33.18 2.01
4138 6466 8.922058 ATTTGTGTATCGACTATTTAACTCGT 57.078 30.769 0.00 0.00 0.00 4.18
4154 6526 8.424918 TGGTGGTTTGTTCAAATATTTGTGTAT 58.575 29.630 23.95 0.00 39.18 2.29
4168 6540 7.227910 TGACTATTTAACTCTGGTGGTTTGTTC 59.772 37.037 0.00 0.00 0.00 3.18
4180 6552 7.611770 TGTATGTGCACTGACTATTTAACTCT 58.388 34.615 19.41 0.00 0.00 3.24
4181 6553 7.827819 TGTATGTGCACTGACTATTTAACTC 57.172 36.000 19.41 0.00 0.00 3.01
4182 6554 8.792830 AATGTATGTGCACTGACTATTTAACT 57.207 30.769 19.41 0.00 0.00 2.24
4183 6555 9.840427 AAAATGTATGTGCACTGACTATTTAAC 57.160 29.630 19.41 0.00 0.00 2.01
4186 6558 9.840427 GTTAAAATGTATGTGCACTGACTATTT 57.160 29.630 19.41 18.95 0.00 1.40
4187 6559 9.008965 TGTTAAAATGTATGTGCACTGACTATT 57.991 29.630 19.41 13.54 0.00 1.73
4188 6560 8.560355 TGTTAAAATGTATGTGCACTGACTAT 57.440 30.769 19.41 5.07 0.00 2.12
4189 6561 7.971183 TGTTAAAATGTATGTGCACTGACTA 57.029 32.000 19.41 7.23 0.00 2.59
4190 6562 6.875948 TGTTAAAATGTATGTGCACTGACT 57.124 33.333 19.41 2.80 0.00 3.41
4191 6563 7.096230 GGTTTGTTAAAATGTATGTGCACTGAC 60.096 37.037 19.41 15.68 0.00 3.51
4192 6564 6.920758 GGTTTGTTAAAATGTATGTGCACTGA 59.079 34.615 19.41 2.42 0.00 3.41
4193 6565 6.699204 TGGTTTGTTAAAATGTATGTGCACTG 59.301 34.615 19.41 0.00 0.00 3.66
4194 6566 6.699642 GTGGTTTGTTAAAATGTATGTGCACT 59.300 34.615 19.41 6.22 0.00 4.40
4195 6567 6.345408 CGTGGTTTGTTAAAATGTATGTGCAC 60.345 38.462 10.75 10.75 0.00 4.57
4196 6568 5.687730 CGTGGTTTGTTAAAATGTATGTGCA 59.312 36.000 0.00 0.00 0.00 4.57
4197 6569 5.387958 GCGTGGTTTGTTAAAATGTATGTGC 60.388 40.000 0.00 0.00 0.00 4.57
4198 6570 5.687730 TGCGTGGTTTGTTAAAATGTATGTG 59.312 36.000 0.00 0.00 0.00 3.21
4199 6571 5.833082 TGCGTGGTTTGTTAAAATGTATGT 58.167 33.333 0.00 0.00 0.00 2.29
4200 6572 6.146216 TCTGCGTGGTTTGTTAAAATGTATG 58.854 36.000 0.00 0.00 0.00 2.39
4201 6573 6.016610 ACTCTGCGTGGTTTGTTAAAATGTAT 60.017 34.615 0.00 0.00 0.00 2.29
4202 6574 5.297278 ACTCTGCGTGGTTTGTTAAAATGTA 59.703 36.000 0.00 0.00 0.00 2.29
4203 6575 4.097286 ACTCTGCGTGGTTTGTTAAAATGT 59.903 37.500 0.00 0.00 0.00 2.71
4204 6576 4.606961 ACTCTGCGTGGTTTGTTAAAATG 58.393 39.130 0.00 0.00 0.00 2.32
4205 6577 4.911514 ACTCTGCGTGGTTTGTTAAAAT 57.088 36.364 0.00 0.00 0.00 1.82
4206 6578 4.705337 AACTCTGCGTGGTTTGTTAAAA 57.295 36.364 0.00 0.00 0.00 1.52
4207 6579 5.354792 ACTTAACTCTGCGTGGTTTGTTAAA 59.645 36.000 0.00 0.00 32.10 1.52
4208 6580 4.877251 ACTTAACTCTGCGTGGTTTGTTAA 59.123 37.500 0.00 0.00 0.00 2.01
4209 6581 4.444536 ACTTAACTCTGCGTGGTTTGTTA 58.555 39.130 0.00 0.00 0.00 2.41
4210 6582 3.275999 ACTTAACTCTGCGTGGTTTGTT 58.724 40.909 0.00 0.00 0.00 2.83
4211 6583 2.914059 ACTTAACTCTGCGTGGTTTGT 58.086 42.857 0.00 0.00 0.00 2.83
4212 6584 4.056050 ACTACTTAACTCTGCGTGGTTTG 58.944 43.478 0.00 0.00 0.00 2.93
4213 6585 4.332428 ACTACTTAACTCTGCGTGGTTT 57.668 40.909 0.00 0.00 0.00 3.27
4214 6586 4.056050 CAACTACTTAACTCTGCGTGGTT 58.944 43.478 0.00 0.00 32.41 3.67
4215 6587 3.650139 CAACTACTTAACTCTGCGTGGT 58.350 45.455 0.00 0.00 0.00 4.16
4216 6588 2.412089 GCAACTACTTAACTCTGCGTGG 59.588 50.000 0.00 0.00 0.00 4.94
4217 6589 3.318017 AGCAACTACTTAACTCTGCGTG 58.682 45.455 0.00 0.00 35.00 5.34
4218 6590 3.662247 AGCAACTACTTAACTCTGCGT 57.338 42.857 0.00 0.00 35.00 5.24
4219 6591 4.323868 GTGTAGCAACTACTTAACTCTGCG 59.676 45.833 6.34 0.00 37.78 5.18
4220 6592 5.227908 TGTGTAGCAACTACTTAACTCTGC 58.772 41.667 6.34 0.00 37.78 4.26
4221 6593 7.709269 TTTGTGTAGCAACTACTTAACTCTG 57.291 36.000 6.34 0.00 37.78 3.35
4222 6594 9.640963 CTATTTGTGTAGCAACTACTTAACTCT 57.359 33.333 6.34 0.00 37.78 3.24
4223 6595 9.420551 ACTATTTGTGTAGCAACTACTTAACTC 57.579 33.333 6.34 0.00 37.78 3.01
4224 6596 9.774413 AACTATTTGTGTAGCAACTACTTAACT 57.226 29.630 6.34 0.15 37.78 2.24
4225 6597 9.807386 CAACTATTTGTGTAGCAACTACTTAAC 57.193 33.333 6.34 0.00 37.78 2.01
4226 6598 8.995220 CCAACTATTTGTGTAGCAACTACTTAA 58.005 33.333 6.34 0.00 37.78 1.85
4227 6599 8.369424 TCCAACTATTTGTGTAGCAACTACTTA 58.631 33.333 6.34 0.00 37.78 2.24
4228 6600 7.221450 TCCAACTATTTGTGTAGCAACTACTT 58.779 34.615 6.34 0.00 37.78 2.24
4229 6601 6.765403 TCCAACTATTTGTGTAGCAACTACT 58.235 36.000 6.34 0.00 37.78 2.57
4230 6602 7.611213 ATCCAACTATTTGTGTAGCAACTAC 57.389 36.000 0.00 0.00 36.72 2.73
4231 6603 7.494625 GCTATCCAACTATTTGTGTAGCAACTA 59.505 37.037 15.61 0.00 40.30 2.24
4232 6604 6.316390 GCTATCCAACTATTTGTGTAGCAACT 59.684 38.462 15.61 0.00 40.30 3.16
4233 6605 6.093495 TGCTATCCAACTATTTGTGTAGCAAC 59.907 38.462 18.56 0.00 43.53 4.17
4234 6606 6.176896 TGCTATCCAACTATTTGTGTAGCAA 58.823 36.000 18.56 9.02 43.53 3.91
4235 6607 5.739959 TGCTATCCAACTATTTGTGTAGCA 58.260 37.500 17.67 17.67 43.87 3.49
4236 6608 6.867662 ATGCTATCCAACTATTTGTGTAGC 57.132 37.500 14.49 14.49 40.62 3.58
4237 6609 8.499162 GCTTATGCTATCCAACTATTTGTGTAG 58.501 37.037 0.00 0.00 36.03 2.74
4238 6610 8.378172 GCTTATGCTATCCAACTATTTGTGTA 57.622 34.615 0.00 0.00 36.03 2.90
4239 6611 7.264373 GCTTATGCTATCCAACTATTTGTGT 57.736 36.000 0.00 0.00 36.03 3.72
4266 6638 5.596836 TTGAGCCTTGAAGAATTTGTGTT 57.403 34.783 0.00 0.00 0.00 3.32
4308 6704 1.203237 TCAAGGAGAAGCAGGACCTCT 60.203 52.381 0.00 0.00 31.89 3.69
4386 6782 1.239968 GCTTTGCCAGACAGGTGAGG 61.240 60.000 0.00 0.00 40.61 3.86
4392 6788 1.288127 GCCAAGCTTTGCCAGACAG 59.712 57.895 11.38 0.00 0.00 3.51
4393 6789 1.042003 TTGCCAAGCTTTGCCAGACA 61.042 50.000 18.94 0.00 0.00 3.41
4396 6792 1.005394 CCTTGCCAAGCTTTGCCAG 60.005 57.895 18.94 16.68 0.00 4.85
4442 6838 3.665190 GAACCTACTTGGAGTCTGGTTG 58.335 50.000 17.29 0.00 41.73 3.77
4443 6839 2.299297 CGAACCTACTTGGAGTCTGGTT 59.701 50.000 14.20 14.20 43.18 3.67
4554 6953 2.880963 TGATTGTCGCGGTGATGATA 57.119 45.000 6.13 0.00 0.00 2.15
4623 7022 0.603707 CCGAGTTGCTTGCTCCTTGA 60.604 55.000 0.00 0.00 0.00 3.02
4624 7023 1.871772 CCGAGTTGCTTGCTCCTTG 59.128 57.895 0.00 0.00 0.00 3.61
4780 7179 3.119291 CACTCTTAGCAAGCGGTATGAG 58.881 50.000 11.02 11.02 45.74 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.