Multiple sequence alignment - TraesCS2B01G554300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G554300 chr2B 100.000 5057 0 0 1 5057 749422623 749417567 0.000000e+00 9339
1 TraesCS2B01G554300 chr2B 84.472 2576 373 15 1131 3685 41147452 41144883 0.000000e+00 2516
2 TraesCS2B01G554300 chr2B 84.015 538 74 10 3151 3682 749419443 749418912 1.620000e-139 507
3 TraesCS2B01G554300 chr2B 84.015 538 74 10 3181 3712 749419473 749418942 1.620000e-139 507
4 TraesCS2B01G554300 chr2B 85.849 106 15 0 3607 3712 41145411 41145306 4.140000e-21 113
5 TraesCS2B01G554300 chr2A 95.831 4318 144 17 758 5057 745267425 745263126 0.000000e+00 6944
6 TraesCS2B01G554300 chr2A 84.522 2481 364 10 1119 3583 27969935 27967459 0.000000e+00 2436
7 TraesCS2B01G554300 chr2A 88.993 536 51 6 3181 3712 745265031 745264500 0.000000e+00 656
8 TraesCS2B01G554300 chr2A 82.847 548 84 8 3151 3693 745265001 745264459 2.740000e-132 483
9 TraesCS2B01G554300 chr2A 89.008 373 39 1 20 390 745272315 745271943 1.280000e-125 460
10 TraesCS2B01G554300 chr2A 87.302 252 26 4 432 681 745271937 745271690 2.980000e-72 283
11 TraesCS2B01G554300 chr2D 94.689 2410 115 9 1289 3693 615063362 615060961 0.000000e+00 3729
12 TraesCS2B01G554300 chr2D 94.400 1893 81 14 3181 5057 615061503 615059620 0.000000e+00 2885
13 TraesCS2B01G554300 chr2D 84.298 2592 376 18 1015 3583 25354684 25352101 0.000000e+00 2503
14 TraesCS2B01G554300 chr2D 96.422 531 15 3 750 1279 615064195 615063668 0.000000e+00 872
15 TraesCS2B01G554300 chr2D 86.535 505 62 4 3211 3712 615061503 615061002 7.400000e-153 551
16 TraesCS2B01G554300 chr2D 84.569 499 69 5 3151 3645 615061473 615060979 5.880000e-134 488


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G554300 chr2B 749417567 749422623 5056 True 3451.000000 9339 89.343333 1 5057 3 chr2B.!!$R2 5056
1 TraesCS2B01G554300 chr2B 41144883 41147452 2569 True 1314.500000 2516 85.160500 1131 3712 2 chr2B.!!$R1 2581
2 TraesCS2B01G554300 chr2A 745263126 745267425 4299 True 2694.333333 6944 89.223667 758 5057 3 chr2A.!!$R2 4299
3 TraesCS2B01G554300 chr2A 27967459 27969935 2476 True 2436.000000 2436 84.522000 1119 3583 1 chr2A.!!$R1 2464
4 TraesCS2B01G554300 chr2A 745271690 745272315 625 True 371.500000 460 88.155000 20 681 2 chr2A.!!$R3 661
5 TraesCS2B01G554300 chr2D 25352101 25354684 2583 True 2503.000000 2503 84.298000 1015 3583 1 chr2D.!!$R1 2568
6 TraesCS2B01G554300 chr2D 615059620 615064195 4575 True 1705.000000 3729 91.323000 750 5057 5 chr2D.!!$R2 4307

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 696 0.108615 CGCCGGAGAAACAGAGACAT 60.109 55.000 5.05 0.0 0.00 3.06 F
747 748 0.596082 GGGCACAAAAAGCTCGCTAA 59.404 50.000 0.00 0.0 0.00 3.09 F
748 749 1.000717 GGGCACAAAAAGCTCGCTAAA 60.001 47.619 0.00 0.0 0.00 1.85 F
2109 2461 1.079405 GTTCCAGGACGCCATCGAA 60.079 57.895 0.00 0.0 39.41 3.71 F
2972 3339 1.225704 CCCTGCCTCAAGGTCATCC 59.774 63.158 0.00 0.0 35.34 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2469 2821 1.002134 CTCAAAGGTGGCCGTGGAT 60.002 57.895 0.00 0.0 0.0 3.41 R
2521 2873 1.336440 CAGGTCTCGTGCTCTATCCAG 59.664 57.143 0.00 0.0 0.0 3.86 R
2544 2896 2.593978 CCTCTGGCCATGTCCCTG 59.406 66.667 5.51 0.0 0.0 4.45 R
3254 3711 0.040958 CTGCTGCGTTTGGTGAGAAC 60.041 55.000 0.00 0.0 0.0 3.01 R
4324 4906 2.158755 CCCATTTGATCGCCTAACTCCT 60.159 50.000 0.00 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 0.390209 GTTGGGATGTGCATGTTGGC 60.390 55.000 0.00 0.00 0.00 4.52
68 69 1.543065 TTGGGATGTGCATGTTGGCC 61.543 55.000 0.00 0.00 0.00 5.36
69 70 1.983481 GGGATGTGCATGTTGGCCA 60.983 57.895 0.00 0.00 0.00 5.36
102 103 8.682710 AGTTCTTAAAACACTCATAAGTTGCAA 58.317 29.630 0.00 0.00 31.71 4.08
181 182 9.859427 ATGGTACTGAACATATCACAATTTTTG 57.141 29.630 0.00 0.00 33.47 2.44
223 224 5.048507 GGATCGAGACAACCCAAAGTATAC 58.951 45.833 0.00 0.00 0.00 1.47
224 225 4.460948 TCGAGACAACCCAAAGTATACC 57.539 45.455 0.00 0.00 0.00 2.73
249 250 9.793252 CCAAACTATGTTCTTTTCATAATCCAG 57.207 33.333 0.00 0.00 0.00 3.86
252 253 9.520515 AACTATGTTCTTTTCATAATCCAGTGT 57.479 29.630 0.00 0.00 0.00 3.55
297 298 9.256228 TGTACAAATGGGGCATAATAAAGTTTA 57.744 29.630 0.00 0.00 0.00 2.01
334 335 3.749088 CACCCGCTAAAATGTGACTAACA 59.251 43.478 0.00 0.00 44.79 2.41
344 345 2.778299 TGTGACTAACAACCAGGATGC 58.222 47.619 0.00 0.00 35.24 3.91
347 348 2.027192 TGACTAACAACCAGGATGCTCC 60.027 50.000 0.00 0.00 36.58 4.70
356 357 3.639445 GGATGCTCCTGCCTGAGA 58.361 61.111 3.91 0.00 38.71 3.27
366 367 2.036862 TCCTGCCTGAGATCATCAATCG 59.963 50.000 0.00 0.00 39.55 3.34
375 376 0.830648 ATCATCAATCGGTCCGTGGT 59.169 50.000 11.88 0.00 0.00 4.16
376 377 0.174845 TCATCAATCGGTCCGTGGTC 59.825 55.000 11.88 0.00 0.00 4.02
377 378 0.810031 CATCAATCGGTCCGTGGTCC 60.810 60.000 11.88 0.00 0.00 4.46
378 379 2.292794 ATCAATCGGTCCGTGGTCCG 62.293 60.000 16.90 16.90 45.47 4.79
387 388 4.685447 CGTGGTCCGGAACATTGA 57.315 55.556 28.02 0.00 0.00 2.57
388 389 3.153024 CGTGGTCCGGAACATTGAT 57.847 52.632 28.02 0.00 0.00 2.57
389 390 1.006832 CGTGGTCCGGAACATTGATC 58.993 55.000 28.02 11.52 0.00 2.92
390 391 1.405526 CGTGGTCCGGAACATTGATCT 60.406 52.381 28.02 0.00 0.00 2.75
391 392 2.280628 GTGGTCCGGAACATTGATCTC 58.719 52.381 28.02 6.89 0.00 2.75
392 393 2.093447 GTGGTCCGGAACATTGATCTCT 60.093 50.000 28.02 0.00 0.00 3.10
393 394 2.093500 TGGTCCGGAACATTGATCTCTG 60.093 50.000 20.95 0.00 0.00 3.35
394 395 2.168521 GGTCCGGAACATTGATCTCTGA 59.831 50.000 16.61 0.00 0.00 3.27
395 396 3.181461 GGTCCGGAACATTGATCTCTGAT 60.181 47.826 16.61 0.00 0.00 2.90
396 397 4.054671 GTCCGGAACATTGATCTCTGATC 58.945 47.826 5.23 0.98 0.00 2.92
397 398 3.706086 TCCGGAACATTGATCTCTGATCA 59.294 43.478 0.00 6.19 0.00 2.92
398 399 4.056740 CCGGAACATTGATCTCTGATCAG 58.943 47.826 17.07 17.07 0.00 2.90
399 400 4.056740 CGGAACATTGATCTCTGATCAGG 58.943 47.826 22.42 13.07 0.00 3.86
400 401 4.202192 CGGAACATTGATCTCTGATCAGGA 60.202 45.833 22.42 17.66 0.00 3.86
401 402 5.678583 GGAACATTGATCTCTGATCAGGAA 58.321 41.667 22.42 11.24 0.00 3.36
402 403 5.526846 GGAACATTGATCTCTGATCAGGAAC 59.473 44.000 22.42 16.13 0.00 3.62
403 404 5.688814 ACATTGATCTCTGATCAGGAACA 57.311 39.130 22.42 18.21 0.00 3.18
404 405 6.249911 ACATTGATCTCTGATCAGGAACAT 57.750 37.500 22.42 9.22 0.00 2.71
405 406 6.289834 ACATTGATCTCTGATCAGGAACATC 58.710 40.000 22.42 16.74 0.00 3.06
406 407 4.952071 TGATCTCTGATCAGGAACATCC 57.048 45.455 22.42 6.63 36.58 3.51
407 408 3.645212 TGATCTCTGATCAGGAACATCCC 59.355 47.826 22.42 5.20 37.19 3.85
408 409 2.034878 TCTCTGATCAGGAACATCCCG 58.965 52.381 22.42 0.00 37.19 5.14
409 410 2.034878 CTCTGATCAGGAACATCCCGA 58.965 52.381 22.42 0.00 37.19 5.14
410 411 2.632028 CTCTGATCAGGAACATCCCGAT 59.368 50.000 22.42 0.00 37.19 4.18
411 412 2.630098 TCTGATCAGGAACATCCCGATC 59.370 50.000 22.42 13.38 37.19 3.69
412 413 1.341209 TGATCAGGAACATCCCGATCG 59.659 52.381 8.51 8.51 37.19 3.69
413 414 1.341531 GATCAGGAACATCCCGATCGT 59.658 52.381 15.09 0.00 37.19 3.73
414 415 1.191535 TCAGGAACATCCCGATCGTT 58.808 50.000 15.09 0.36 37.19 3.85
415 416 2.380941 TCAGGAACATCCCGATCGTTA 58.619 47.619 15.09 1.31 37.19 3.18
416 417 2.100252 TCAGGAACATCCCGATCGTTAC 59.900 50.000 15.09 1.69 37.19 2.50
417 418 2.100916 CAGGAACATCCCGATCGTTACT 59.899 50.000 15.09 4.27 37.19 2.24
418 419 2.361438 AGGAACATCCCGATCGTTACTC 59.639 50.000 15.09 2.78 37.19 2.59
419 420 2.100252 GGAACATCCCGATCGTTACTCA 59.900 50.000 15.09 0.00 0.00 3.41
420 421 2.865343 ACATCCCGATCGTTACTCAC 57.135 50.000 15.09 0.00 0.00 3.51
421 422 1.407979 ACATCCCGATCGTTACTCACC 59.592 52.381 15.09 0.00 0.00 4.02
422 423 1.407618 CATCCCGATCGTTACTCACCA 59.592 52.381 15.09 0.00 0.00 4.17
423 424 1.548081 TCCCGATCGTTACTCACCAA 58.452 50.000 15.09 0.00 0.00 3.67
424 425 1.894466 TCCCGATCGTTACTCACCAAA 59.106 47.619 15.09 0.00 0.00 3.28
425 426 1.997606 CCCGATCGTTACTCACCAAAC 59.002 52.381 15.09 0.00 0.00 2.93
426 427 1.997606 CCGATCGTTACTCACCAAACC 59.002 52.381 15.09 0.00 0.00 3.27
427 428 1.652124 CGATCGTTACTCACCAAACCG 59.348 52.381 7.03 0.00 0.00 4.44
428 429 2.669113 CGATCGTTACTCACCAAACCGA 60.669 50.000 7.03 0.00 0.00 4.69
429 430 2.427232 TCGTTACTCACCAAACCGAG 57.573 50.000 0.00 0.00 35.30 4.63
430 431 1.682854 TCGTTACTCACCAAACCGAGT 59.317 47.619 0.00 0.00 44.51 4.18
431 432 2.101249 TCGTTACTCACCAAACCGAGTT 59.899 45.455 0.00 0.00 42.41 3.01
432 433 2.473984 CGTTACTCACCAAACCGAGTTC 59.526 50.000 0.00 0.00 42.41 3.01
433 434 3.460103 GTTACTCACCAAACCGAGTTCA 58.540 45.455 0.00 0.00 42.41 3.18
434 435 2.930826 ACTCACCAAACCGAGTTCAT 57.069 45.000 0.00 0.00 39.45 2.57
435 436 2.767505 ACTCACCAAACCGAGTTCATC 58.232 47.619 0.00 0.00 39.45 2.92
436 437 2.104111 ACTCACCAAACCGAGTTCATCA 59.896 45.455 0.00 0.00 39.45 3.07
437 438 3.138304 CTCACCAAACCGAGTTCATCAA 58.862 45.455 0.00 0.00 0.00 2.57
438 439 3.750371 TCACCAAACCGAGTTCATCAAT 58.250 40.909 0.00 0.00 0.00 2.57
439 440 3.751175 TCACCAAACCGAGTTCATCAATC 59.249 43.478 0.00 0.00 0.00 2.67
440 441 2.742053 ACCAAACCGAGTTCATCAATCG 59.258 45.455 0.00 0.00 36.24 3.34
441 442 3.000041 CCAAACCGAGTTCATCAATCGA 59.000 45.455 0.00 0.00 38.72 3.59
442 443 3.623060 CCAAACCGAGTTCATCAATCGAT 59.377 43.478 0.00 0.00 38.72 3.59
443 444 4.260375 CCAAACCGAGTTCATCAATCGATC 60.260 45.833 0.00 0.00 38.72 3.69
444 445 4.392921 AACCGAGTTCATCAATCGATCT 57.607 40.909 0.00 0.00 38.72 2.75
445 446 3.711086 ACCGAGTTCATCAATCGATCTG 58.289 45.455 0.00 0.00 38.72 2.90
446 447 3.131223 ACCGAGTTCATCAATCGATCTGT 59.869 43.478 0.00 0.00 38.72 3.41
447 448 3.733224 CCGAGTTCATCAATCGATCTGTC 59.267 47.826 0.00 0.00 38.72 3.51
448 449 4.354587 CGAGTTCATCAATCGATCTGTCA 58.645 43.478 0.00 0.00 38.72 3.58
449 450 4.981054 CGAGTTCATCAATCGATCTGTCAT 59.019 41.667 0.00 0.00 38.72 3.06
450 451 5.116831 CGAGTTCATCAATCGATCTGTCATC 59.883 44.000 0.00 0.00 38.72 2.92
451 452 6.159299 AGTTCATCAATCGATCTGTCATCT 57.841 37.500 0.00 0.00 0.00 2.90
452 453 5.984323 AGTTCATCAATCGATCTGTCATCTG 59.016 40.000 0.00 0.00 0.00 2.90
453 454 5.779529 TCATCAATCGATCTGTCATCTGA 57.220 39.130 0.00 0.00 0.00 3.27
454 455 5.527033 TCATCAATCGATCTGTCATCTGAC 58.473 41.667 0.00 3.34 44.97 3.51
455 456 5.301298 TCATCAATCGATCTGTCATCTGACT 59.699 40.000 11.35 0.00 44.99 3.41
456 457 5.180367 TCAATCGATCTGTCATCTGACTC 57.820 43.478 11.35 0.83 44.99 3.36
457 458 4.641989 TCAATCGATCTGTCATCTGACTCA 59.358 41.667 11.35 0.00 44.99 3.41
458 459 5.126061 TCAATCGATCTGTCATCTGACTCAA 59.874 40.000 11.35 0.00 44.99 3.02
459 460 5.588958 ATCGATCTGTCATCTGACTCAAA 57.411 39.130 11.35 0.00 44.99 2.69
460 461 5.391312 TCGATCTGTCATCTGACTCAAAA 57.609 39.130 11.35 0.00 44.99 2.44
461 462 5.164233 TCGATCTGTCATCTGACTCAAAAC 58.836 41.667 11.35 0.00 44.99 2.43
462 463 4.328440 CGATCTGTCATCTGACTCAAAACC 59.672 45.833 11.35 0.00 44.99 3.27
463 464 4.963318 TCTGTCATCTGACTCAAAACCT 57.037 40.909 11.35 0.00 44.99 3.50
464 465 4.635223 TCTGTCATCTGACTCAAAACCTG 58.365 43.478 11.35 0.00 44.99 4.00
465 466 4.101585 TCTGTCATCTGACTCAAAACCTGT 59.898 41.667 11.35 0.00 44.99 4.00
466 467 5.304357 TCTGTCATCTGACTCAAAACCTGTA 59.696 40.000 11.35 0.00 44.99 2.74
467 468 5.541845 TGTCATCTGACTCAAAACCTGTAG 58.458 41.667 11.35 0.00 44.99 2.74
468 469 4.932200 GTCATCTGACTCAAAACCTGTAGG 59.068 45.833 3.07 0.00 41.65 3.18
469 470 4.020218 TCATCTGACTCAAAACCTGTAGGG 60.020 45.833 2.53 0.00 40.27 3.53
470 471 2.637872 TCTGACTCAAAACCTGTAGGGG 59.362 50.000 2.53 0.00 40.27 4.79
471 472 1.702957 TGACTCAAAACCTGTAGGGGG 59.297 52.381 2.53 0.00 40.27 5.40
472 473 1.703513 GACTCAAAACCTGTAGGGGGT 59.296 52.381 2.53 0.00 40.27 4.95
473 474 2.908351 GACTCAAAACCTGTAGGGGGTA 59.092 50.000 2.53 0.00 40.27 3.69
474 475 2.641321 ACTCAAAACCTGTAGGGGGTAC 59.359 50.000 2.53 0.00 40.27 3.34
475 476 2.640826 CTCAAAACCTGTAGGGGGTACA 59.359 50.000 2.53 0.00 39.47 2.90
476 477 3.261962 TCAAAACCTGTAGGGGGTACAT 58.738 45.455 2.53 0.00 40.99 2.29
477 478 3.658705 TCAAAACCTGTAGGGGGTACATT 59.341 43.478 2.53 0.00 40.99 2.71
478 479 4.850963 TCAAAACCTGTAGGGGGTACATTA 59.149 41.667 2.53 0.00 40.99 1.90
479 480 4.849813 AAACCTGTAGGGGGTACATTAC 57.150 45.455 2.53 0.00 40.99 1.89
480 481 3.790022 ACCTGTAGGGGGTACATTACT 57.210 47.619 2.53 0.00 40.99 2.24
481 482 4.084466 ACCTGTAGGGGGTACATTACTT 57.916 45.455 2.53 0.00 40.99 2.24
482 483 4.441757 ACCTGTAGGGGGTACATTACTTT 58.558 43.478 2.53 0.00 40.99 2.66
483 484 4.853856 ACCTGTAGGGGGTACATTACTTTT 59.146 41.667 2.53 0.00 40.99 2.27
484 485 5.314039 ACCTGTAGGGGGTACATTACTTTTT 59.686 40.000 2.53 0.00 40.99 1.94
485 486 5.650703 CCTGTAGGGGGTACATTACTTTTTG 59.349 44.000 0.00 0.00 40.99 2.44
486 487 6.451292 TGTAGGGGGTACATTACTTTTTGA 57.549 37.500 0.00 0.00 36.67 2.69
487 488 6.850234 TGTAGGGGGTACATTACTTTTTGAA 58.150 36.000 0.00 0.00 36.67 2.69
488 489 6.716173 TGTAGGGGGTACATTACTTTTTGAAC 59.284 38.462 0.00 0.00 36.67 3.18
489 490 4.763279 AGGGGGTACATTACTTTTTGAACG 59.237 41.667 0.00 0.00 0.00 3.95
490 491 4.761227 GGGGGTACATTACTTTTTGAACGA 59.239 41.667 0.00 0.00 0.00 3.85
491 492 5.106436 GGGGGTACATTACTTTTTGAACGAG 60.106 44.000 0.00 0.00 0.00 4.18
492 493 5.106436 GGGGTACATTACTTTTTGAACGAGG 60.106 44.000 0.00 0.00 0.00 4.63
493 494 5.702209 GGGTACATTACTTTTTGAACGAGGA 59.298 40.000 0.00 0.00 0.00 3.71
494 495 6.128363 GGGTACATTACTTTTTGAACGAGGAG 60.128 42.308 0.00 0.00 0.00 3.69
495 496 6.647895 GGTACATTACTTTTTGAACGAGGAGA 59.352 38.462 0.00 0.00 0.00 3.71
496 497 6.787085 ACATTACTTTTTGAACGAGGAGAG 57.213 37.500 0.00 0.00 0.00 3.20
497 498 6.289064 ACATTACTTTTTGAACGAGGAGAGT 58.711 36.000 0.00 0.00 0.00 3.24
498 499 6.766467 ACATTACTTTTTGAACGAGGAGAGTT 59.234 34.615 0.00 0.00 34.07 3.01
499 500 6.598753 TTACTTTTTGAACGAGGAGAGTTG 57.401 37.500 0.00 0.00 31.14 3.16
500 501 4.766375 ACTTTTTGAACGAGGAGAGTTGA 58.234 39.130 0.00 0.00 31.14 3.18
501 502 5.183228 ACTTTTTGAACGAGGAGAGTTGAA 58.817 37.500 0.00 0.00 31.14 2.69
502 503 5.646360 ACTTTTTGAACGAGGAGAGTTGAAA 59.354 36.000 0.00 0.00 34.03 2.69
503 504 6.150474 ACTTTTTGAACGAGGAGAGTTGAAAA 59.850 34.615 3.18 3.18 40.77 2.29
504 505 6.693315 TTTTGAACGAGGAGAGTTGAAAAT 57.307 33.333 3.18 0.00 38.84 1.82
505 506 5.673337 TTGAACGAGGAGAGTTGAAAATG 57.327 39.130 0.00 0.00 31.14 2.32
506 507 4.956085 TGAACGAGGAGAGTTGAAAATGA 58.044 39.130 0.00 0.00 31.14 2.57
507 508 5.364778 TGAACGAGGAGAGTTGAAAATGAA 58.635 37.500 0.00 0.00 31.14 2.57
508 509 5.236478 TGAACGAGGAGAGTTGAAAATGAAC 59.764 40.000 0.00 0.00 31.14 3.18
509 510 3.741344 ACGAGGAGAGTTGAAAATGAACG 59.259 43.478 0.00 0.00 0.00 3.95
510 511 3.123621 CGAGGAGAGTTGAAAATGAACGG 59.876 47.826 0.00 0.00 0.00 4.44
511 512 4.315803 GAGGAGAGTTGAAAATGAACGGA 58.684 43.478 0.00 0.00 0.00 4.69
512 513 4.065789 AGGAGAGTTGAAAATGAACGGAC 58.934 43.478 0.00 0.00 0.00 4.79
513 514 3.120649 GGAGAGTTGAAAATGAACGGACG 60.121 47.826 0.00 0.00 0.00 4.79
514 515 3.724374 AGAGTTGAAAATGAACGGACGA 58.276 40.909 0.00 0.00 0.00 4.20
515 516 4.124238 AGAGTTGAAAATGAACGGACGAA 58.876 39.130 0.00 0.00 0.00 3.85
516 517 4.573201 AGAGTTGAAAATGAACGGACGAAA 59.427 37.500 0.00 0.00 0.00 3.46
517 518 5.065474 AGAGTTGAAAATGAACGGACGAAAA 59.935 36.000 0.00 0.00 0.00 2.29
518 519 5.642686 AGTTGAAAATGAACGGACGAAAAA 58.357 33.333 0.00 0.00 0.00 1.94
540 541 7.587037 AAAATGGTCCTTGTCATACATATGG 57.413 36.000 7.80 0.00 34.50 2.74
541 542 5.912149 ATGGTCCTTGTCATACATATGGT 57.088 39.130 7.80 0.00 34.50 3.55
542 543 5.708736 TGGTCCTTGTCATACATATGGTT 57.291 39.130 7.80 0.00 34.50 3.67
543 544 5.680619 TGGTCCTTGTCATACATATGGTTC 58.319 41.667 7.80 0.00 34.50 3.62
544 545 5.428457 TGGTCCTTGTCATACATATGGTTCT 59.572 40.000 7.80 0.00 34.50 3.01
545 546 6.069673 TGGTCCTTGTCATACATATGGTTCTT 60.070 38.462 7.80 0.00 34.50 2.52
546 547 6.828785 GGTCCTTGTCATACATATGGTTCTTT 59.171 38.462 7.80 0.00 34.50 2.52
547 548 7.012421 GGTCCTTGTCATACATATGGTTCTTTC 59.988 40.741 7.80 0.00 34.50 2.62
548 549 7.770897 GTCCTTGTCATACATATGGTTCTTTCT 59.229 37.037 7.80 0.00 34.50 2.52
549 550 8.328758 TCCTTGTCATACATATGGTTCTTTCTT 58.671 33.333 7.80 0.00 34.50 2.52
550 551 8.400947 CCTTGTCATACATATGGTTCTTTCTTG 58.599 37.037 7.80 0.00 34.50 3.02
551 552 7.320443 TGTCATACATATGGTTCTTTCTTGC 57.680 36.000 7.80 0.00 34.50 4.01
552 553 7.112122 TGTCATACATATGGTTCTTTCTTGCT 58.888 34.615 7.80 0.00 34.50 3.91
553 554 8.264347 TGTCATACATATGGTTCTTTCTTGCTA 58.736 33.333 7.80 0.00 34.50 3.49
554 555 9.277783 GTCATACATATGGTTCTTTCTTGCTAT 57.722 33.333 7.80 0.00 34.50 2.97
563 564 8.948631 TGGTTCTTTCTTGCTATAGTTATGAG 57.051 34.615 0.84 0.00 0.00 2.90
564 565 7.987458 TGGTTCTTTCTTGCTATAGTTATGAGG 59.013 37.037 0.84 0.00 0.00 3.86
565 566 7.442666 GGTTCTTTCTTGCTATAGTTATGAGGG 59.557 40.741 0.84 0.00 0.00 4.30
566 567 7.676683 TCTTTCTTGCTATAGTTATGAGGGT 57.323 36.000 0.84 0.00 0.00 4.34
567 568 8.777578 TCTTTCTTGCTATAGTTATGAGGGTA 57.222 34.615 0.84 0.00 0.00 3.69
568 569 9.381038 TCTTTCTTGCTATAGTTATGAGGGTAT 57.619 33.333 0.84 0.00 0.00 2.73
571 572 9.824216 TTCTTGCTATAGTTATGAGGGTATACT 57.176 33.333 2.25 0.00 0.00 2.12
572 573 9.463902 TCTTGCTATAGTTATGAGGGTATACTC 57.536 37.037 2.25 0.00 37.99 2.59
573 574 9.469097 CTTGCTATAGTTATGAGGGTATACTCT 57.531 37.037 4.49 4.49 38.32 3.24
574 575 9.824216 TTGCTATAGTTATGAGGGTATACTCTT 57.176 33.333 6.73 0.00 38.32 2.85
575 576 9.244292 TGCTATAGTTATGAGGGTATACTCTTG 57.756 37.037 6.73 0.00 38.32 3.02
576 577 9.463902 GCTATAGTTATGAGGGTATACTCTTGA 57.536 37.037 6.73 0.00 38.32 3.02
578 579 8.887264 ATAGTTATGAGGGTATACTCTTGAGG 57.113 38.462 6.73 0.00 38.32 3.86
579 580 6.923670 AGTTATGAGGGTATACTCTTGAGGA 58.076 40.000 6.73 0.00 38.32 3.71
580 581 7.363031 AGTTATGAGGGTATACTCTTGAGGAA 58.637 38.462 6.73 0.00 38.32 3.36
581 582 7.507616 AGTTATGAGGGTATACTCTTGAGGAAG 59.492 40.741 6.73 0.00 38.32 3.46
582 583 4.547671 TGAGGGTATACTCTTGAGGAAGG 58.452 47.826 6.73 0.00 38.32 3.46
583 584 4.232122 TGAGGGTATACTCTTGAGGAAGGA 59.768 45.833 6.73 0.00 38.32 3.36
584 585 5.103043 TGAGGGTATACTCTTGAGGAAGGAT 60.103 44.000 6.73 0.00 38.32 3.24
585 586 5.399113 AGGGTATACTCTTGAGGAAGGATC 58.601 45.833 0.00 0.00 0.00 3.36
586 587 4.528987 GGGTATACTCTTGAGGAAGGATCC 59.471 50.000 2.48 2.48 46.98 3.36
587 588 9.566835 GAGGGTATACTCTTGAGGAAGGATCCT 62.567 48.148 9.02 9.02 45.23 3.24
598 599 3.203161 GAAGGATCCTTCGTTTGCAAC 57.797 47.619 33.26 12.68 42.23 4.17
599 600 1.534729 AGGATCCTTCGTTTGCAACC 58.465 50.000 9.02 0.00 0.00 3.77
600 601 1.202879 AGGATCCTTCGTTTGCAACCA 60.203 47.619 9.02 0.00 0.00 3.67
601 602 1.611491 GGATCCTTCGTTTGCAACCAA 59.389 47.619 3.84 0.00 0.00 3.67
602 603 2.607038 GGATCCTTCGTTTGCAACCAAC 60.607 50.000 3.84 0.00 0.00 3.77
603 604 1.464734 TCCTTCGTTTGCAACCAACA 58.535 45.000 0.00 0.00 0.00 3.33
604 605 2.028130 TCCTTCGTTTGCAACCAACAT 58.972 42.857 0.00 0.00 0.00 2.71
605 606 3.215151 TCCTTCGTTTGCAACCAACATA 58.785 40.909 0.00 0.00 0.00 2.29
606 607 3.252215 TCCTTCGTTTGCAACCAACATAG 59.748 43.478 0.00 0.00 0.00 2.23
607 608 3.004315 CCTTCGTTTGCAACCAACATAGT 59.996 43.478 0.00 0.00 0.00 2.12
608 609 3.889196 TCGTTTGCAACCAACATAGTC 57.111 42.857 0.00 0.00 0.00 2.59
609 610 2.222213 TCGTTTGCAACCAACATAGTCG 59.778 45.455 0.00 0.00 0.00 4.18
610 611 2.222213 CGTTTGCAACCAACATAGTCGA 59.778 45.455 0.00 0.00 0.00 4.20
611 612 3.120338 CGTTTGCAACCAACATAGTCGAT 60.120 43.478 0.00 0.00 0.00 3.59
612 613 4.092237 CGTTTGCAACCAACATAGTCGATA 59.908 41.667 0.00 0.00 0.00 2.92
613 614 5.220586 CGTTTGCAACCAACATAGTCGATAT 60.221 40.000 0.00 0.00 0.00 1.63
614 615 6.551736 GTTTGCAACCAACATAGTCGATATT 58.448 36.000 0.00 0.00 0.00 1.28
615 616 5.984233 TGCAACCAACATAGTCGATATTC 57.016 39.130 0.00 0.00 0.00 1.75
616 617 5.670485 TGCAACCAACATAGTCGATATTCT 58.330 37.500 0.00 0.00 0.00 2.40
617 618 5.523552 TGCAACCAACATAGTCGATATTCTG 59.476 40.000 0.00 0.00 0.00 3.02
618 619 5.523916 GCAACCAACATAGTCGATATTCTGT 59.476 40.000 0.00 0.00 0.00 3.41
619 620 6.037172 GCAACCAACATAGTCGATATTCTGTT 59.963 38.462 0.00 0.00 0.00 3.16
620 621 7.401860 CAACCAACATAGTCGATATTCTGTTG 58.598 38.462 16.03 16.03 36.24 3.33
621 622 6.873997 ACCAACATAGTCGATATTCTGTTGA 58.126 36.000 20.88 0.00 38.00 3.18
622 623 6.980978 ACCAACATAGTCGATATTCTGTTGAG 59.019 38.462 20.88 15.79 38.00 3.02
623 624 6.422100 CCAACATAGTCGATATTCTGTTGAGG 59.578 42.308 20.88 9.34 38.00 3.86
624 625 6.090483 ACATAGTCGATATTCTGTTGAGGG 57.910 41.667 0.00 0.00 0.00 4.30
625 626 3.460857 AGTCGATATTCTGTTGAGGGC 57.539 47.619 0.00 0.00 0.00 5.19
626 627 3.034635 AGTCGATATTCTGTTGAGGGCT 58.965 45.455 0.00 0.00 0.00 5.19
627 628 3.068873 AGTCGATATTCTGTTGAGGGCTC 59.931 47.826 0.00 0.00 0.00 4.70
628 629 3.031013 TCGATATTCTGTTGAGGGCTCA 58.969 45.455 0.00 0.00 37.91 4.26
629 630 3.126831 CGATATTCTGTTGAGGGCTCAC 58.873 50.000 0.00 0.00 39.66 3.51
630 631 2.672961 TATTCTGTTGAGGGCTCACG 57.327 50.000 0.00 0.00 39.66 4.35
631 632 0.976641 ATTCTGTTGAGGGCTCACGA 59.023 50.000 0.00 0.00 39.66 4.35
632 633 0.756294 TTCTGTTGAGGGCTCACGAA 59.244 50.000 0.00 0.00 39.66 3.85
633 634 0.318441 TCTGTTGAGGGCTCACGAAG 59.682 55.000 0.00 0.00 39.66 3.79
647 648 3.258225 CGAAGCACTCGTCCCATAG 57.742 57.895 0.37 0.00 42.89 2.23
648 649 0.738975 CGAAGCACTCGTCCCATAGA 59.261 55.000 0.37 0.00 42.89 1.98
649 650 1.534175 CGAAGCACTCGTCCCATAGAC 60.534 57.143 0.37 0.00 42.89 2.59
659 660 3.712091 GTCCCATAGACGAGACGAAAT 57.288 47.619 0.00 0.00 35.30 2.17
660 661 3.630101 GTCCCATAGACGAGACGAAATC 58.370 50.000 0.00 0.00 35.30 2.17
661 662 3.315749 GTCCCATAGACGAGACGAAATCT 59.684 47.826 0.00 0.00 36.55 2.40
662 663 4.514441 GTCCCATAGACGAGACGAAATCTA 59.486 45.833 0.00 0.00 34.78 1.98
663 664 5.181622 GTCCCATAGACGAGACGAAATCTAT 59.818 44.000 0.00 0.00 34.78 1.98
664 665 5.768662 TCCCATAGACGAGACGAAATCTATT 59.231 40.000 0.00 0.00 38.00 1.73
665 666 6.264744 TCCCATAGACGAGACGAAATCTATTT 59.735 38.462 0.00 0.00 38.00 1.40
666 667 6.363626 CCCATAGACGAGACGAAATCTATTTG 59.636 42.308 0.00 0.00 38.00 2.32
667 668 6.918569 CCATAGACGAGACGAAATCTATTTGT 59.081 38.462 0.00 0.00 38.00 2.83
668 669 7.113684 CCATAGACGAGACGAAATCTATTTGTC 59.886 40.741 0.00 1.17 38.00 3.18
669 670 5.341617 AGACGAGACGAAATCTATTTGTCC 58.658 41.667 5.22 0.00 38.00 4.02
670 671 4.103357 ACGAGACGAAATCTATTTGTCCG 58.897 43.478 13.21 13.21 38.00 4.79
671 672 4.142534 ACGAGACGAAATCTATTTGTCCGA 60.143 41.667 17.99 0.00 38.00 4.55
672 673 4.796830 CGAGACGAAATCTATTTGTCCGAA 59.203 41.667 5.22 0.00 38.00 4.30
673 674 5.287752 CGAGACGAAATCTATTTGTCCGAAA 59.712 40.000 5.22 0.00 38.00 3.46
674 675 6.019801 CGAGACGAAATCTATTTGTCCGAAAT 60.020 38.462 5.22 0.00 38.00 2.17
675 676 7.005062 AGACGAAATCTATTTGTCCGAAATG 57.995 36.000 5.22 0.00 35.15 2.32
676 677 5.569413 ACGAAATCTATTTGTCCGAAATGC 58.431 37.500 0.00 0.00 0.00 3.56
677 678 4.666176 CGAAATCTATTTGTCCGAAATGCG 59.334 41.667 0.00 0.00 40.47 4.73
678 679 3.609103 ATCTATTTGTCCGAAATGCGC 57.391 42.857 0.00 0.00 39.11 6.09
679 680 1.668751 TCTATTTGTCCGAAATGCGCC 59.331 47.619 4.18 0.00 39.11 6.53
680 681 0.375454 TATTTGTCCGAAATGCGCCG 59.625 50.000 4.18 0.00 39.11 6.46
681 682 2.265073 ATTTGTCCGAAATGCGCCGG 62.265 55.000 15.56 15.56 46.57 6.13
686 687 3.173853 CGAAATGCGCCGGAGAAA 58.826 55.556 10.31 0.00 0.00 2.52
687 688 1.226018 CGAAATGCGCCGGAGAAAC 60.226 57.895 10.31 0.00 0.00 2.78
688 689 1.873165 GAAATGCGCCGGAGAAACA 59.127 52.632 10.31 0.00 0.00 2.83
689 690 0.179189 GAAATGCGCCGGAGAAACAG 60.179 55.000 10.31 0.00 0.00 3.16
690 691 0.605319 AAATGCGCCGGAGAAACAGA 60.605 50.000 10.31 0.00 0.00 3.41
691 692 1.021390 AATGCGCCGGAGAAACAGAG 61.021 55.000 10.31 0.00 0.00 3.35
692 693 1.888436 ATGCGCCGGAGAAACAGAGA 61.888 55.000 10.31 0.00 0.00 3.10
693 694 2.095252 GCGCCGGAGAAACAGAGAC 61.095 63.158 10.31 0.00 0.00 3.36
694 695 1.289066 CGCCGGAGAAACAGAGACA 59.711 57.895 5.05 0.00 0.00 3.41
695 696 0.108615 CGCCGGAGAAACAGAGACAT 60.109 55.000 5.05 0.00 0.00 3.06
696 697 1.134367 CGCCGGAGAAACAGAGACATA 59.866 52.381 5.05 0.00 0.00 2.29
697 698 2.416836 CGCCGGAGAAACAGAGACATAA 60.417 50.000 5.05 0.00 0.00 1.90
698 699 3.596214 GCCGGAGAAACAGAGACATAAA 58.404 45.455 5.05 0.00 0.00 1.40
699 700 4.000988 GCCGGAGAAACAGAGACATAAAA 58.999 43.478 5.05 0.00 0.00 1.52
700 701 4.093556 GCCGGAGAAACAGAGACATAAAAG 59.906 45.833 5.05 0.00 0.00 2.27
701 702 5.238583 CCGGAGAAACAGAGACATAAAAGT 58.761 41.667 0.00 0.00 0.00 2.66
702 703 5.348997 CCGGAGAAACAGAGACATAAAAGTC 59.651 44.000 0.00 0.00 38.81 3.01
703 704 5.061064 CGGAGAAACAGAGACATAAAAGTCG 59.939 44.000 0.00 0.00 43.24 4.18
704 705 5.163943 GGAGAAACAGAGACATAAAAGTCGC 60.164 44.000 0.00 0.00 43.24 5.19
705 706 5.297547 AGAAACAGAGACATAAAAGTCGCA 58.702 37.500 0.00 0.00 43.24 5.10
706 707 5.934625 AGAAACAGAGACATAAAAGTCGCAT 59.065 36.000 0.00 0.00 43.24 4.73
707 708 5.786401 AACAGAGACATAAAAGTCGCATC 57.214 39.130 0.00 0.00 43.24 3.91
708 709 5.078411 ACAGAGACATAAAAGTCGCATCT 57.922 39.130 0.00 0.00 43.24 2.90
709 710 5.482908 ACAGAGACATAAAAGTCGCATCTT 58.517 37.500 0.00 0.00 43.24 2.40
710 711 5.578727 ACAGAGACATAAAAGTCGCATCTTC 59.421 40.000 0.00 0.00 43.24 2.87
711 712 5.578336 CAGAGACATAAAAGTCGCATCTTCA 59.422 40.000 0.00 0.00 43.24 3.02
712 713 6.257411 CAGAGACATAAAAGTCGCATCTTCAT 59.743 38.462 0.00 0.00 43.24 2.57
713 714 6.257411 AGAGACATAAAAGTCGCATCTTCATG 59.743 38.462 0.00 0.00 43.24 3.07
714 715 6.108687 AGACATAAAAGTCGCATCTTCATGA 58.891 36.000 0.00 0.00 43.24 3.07
715 716 6.036517 AGACATAAAAGTCGCATCTTCATGAC 59.963 38.462 0.00 10.22 43.24 3.06
716 717 5.877012 ACATAAAAGTCGCATCTTCATGACT 59.123 36.000 0.00 0.00 43.18 3.41
717 718 4.935885 AAAAGTCGCATCTTCATGACTC 57.064 40.909 0.00 0.00 40.62 3.36
718 719 2.593346 AGTCGCATCTTCATGACTCC 57.407 50.000 0.00 0.00 37.07 3.85
719 720 2.106566 AGTCGCATCTTCATGACTCCT 58.893 47.619 0.00 0.00 37.07 3.69
720 721 2.100584 AGTCGCATCTTCATGACTCCTC 59.899 50.000 0.00 0.00 37.07 3.71
721 722 2.102578 TCGCATCTTCATGACTCCTCA 58.897 47.619 0.00 0.00 30.57 3.86
722 723 2.697229 TCGCATCTTCATGACTCCTCAT 59.303 45.455 0.00 0.00 37.65 2.90
723 724 3.891366 TCGCATCTTCATGACTCCTCATA 59.109 43.478 0.00 0.00 35.17 2.15
724 725 4.525874 TCGCATCTTCATGACTCCTCATAT 59.474 41.667 0.00 0.00 35.17 1.78
725 726 4.626172 CGCATCTTCATGACTCCTCATATG 59.374 45.833 0.00 0.00 35.17 1.78
726 727 5.549347 GCATCTTCATGACTCCTCATATGT 58.451 41.667 1.90 0.00 35.17 2.29
727 728 5.638657 GCATCTTCATGACTCCTCATATGTC 59.361 44.000 1.90 0.00 35.17 3.06
728 729 5.444663 TCTTCATGACTCCTCATATGTCG 57.555 43.478 1.90 0.00 35.17 4.35
729 730 4.279420 TCTTCATGACTCCTCATATGTCGG 59.721 45.833 1.90 5.14 35.17 4.79
730 731 2.893489 TCATGACTCCTCATATGTCGGG 59.107 50.000 1.90 4.44 35.17 5.14
731 732 1.040646 TGACTCCTCATATGTCGGGC 58.959 55.000 1.90 0.00 33.81 6.13
732 733 1.040646 GACTCCTCATATGTCGGGCA 58.959 55.000 1.90 0.00 0.00 5.36
733 734 0.753262 ACTCCTCATATGTCGGGCAC 59.247 55.000 1.90 0.00 0.00 5.01
734 735 0.752658 CTCCTCATATGTCGGGCACA 59.247 55.000 1.90 0.00 40.18 4.57
735 736 1.138859 CTCCTCATATGTCGGGCACAA 59.861 52.381 1.90 0.00 38.97 3.33
736 737 1.557371 TCCTCATATGTCGGGCACAAA 59.443 47.619 1.90 0.00 38.97 2.83
737 738 2.026729 TCCTCATATGTCGGGCACAAAA 60.027 45.455 1.90 0.00 38.97 2.44
738 739 2.752354 CCTCATATGTCGGGCACAAAAA 59.248 45.455 1.90 0.00 38.97 1.94
739 740 3.181497 CCTCATATGTCGGGCACAAAAAG 60.181 47.826 1.90 0.00 38.97 2.27
740 741 2.163412 TCATATGTCGGGCACAAAAAGC 59.837 45.455 1.90 0.00 38.97 3.51
741 742 1.904287 TATGTCGGGCACAAAAAGCT 58.096 45.000 0.00 0.00 38.97 3.74
742 743 0.598065 ATGTCGGGCACAAAAAGCTC 59.402 50.000 0.00 0.00 38.97 4.09
745 746 3.042560 GGGCACAAAAAGCTCGCT 58.957 55.556 0.00 0.00 0.00 4.93
746 747 2.253513 GGGCACAAAAAGCTCGCTA 58.746 52.632 0.00 0.00 0.00 4.26
747 748 0.596082 GGGCACAAAAAGCTCGCTAA 59.404 50.000 0.00 0.00 0.00 3.09
748 749 1.000717 GGGCACAAAAAGCTCGCTAAA 60.001 47.619 0.00 0.00 0.00 1.85
753 754 4.915085 GCACAAAAAGCTCGCTAAAATACA 59.085 37.500 0.00 0.00 0.00 2.29
756 757 6.801377 CACAAAAAGCTCGCTAAAATACATCA 59.199 34.615 0.00 0.00 0.00 3.07
797 798 7.780064 TCATGGTGATGAAGAAAGAAAAACAA 58.220 30.769 0.00 0.00 35.55 2.83
815 816 8.731275 AAAAACAAAAGAAATAGAAAGGGTGG 57.269 30.769 0.00 0.00 0.00 4.61
926 929 2.485302 GCAAAACTGAGCCCATTTGGTT 60.485 45.455 0.00 0.00 34.25 3.67
927 930 3.392882 CAAAACTGAGCCCATTTGGTTC 58.607 45.455 0.00 0.00 44.25 3.62
1059 1067 1.969923 CTCTCCATCTCCATCTCCCAC 59.030 57.143 0.00 0.00 0.00 4.61
1989 2341 2.320587 GCACAAGGAGGCACACGAG 61.321 63.158 0.00 0.00 0.00 4.18
2109 2461 1.079405 GTTCCAGGACGCCATCGAA 60.079 57.895 0.00 0.00 39.41 3.71
2130 2482 4.704833 TTCCACAGGCAGCCGAGC 62.705 66.667 5.55 0.00 0.00 5.03
2135 2487 3.123620 CAGGCAGCCGAGCAAGAC 61.124 66.667 5.55 0.00 35.83 3.01
2253 2605 1.569479 GCAAGTCGGTGCTTCCAGAC 61.569 60.000 11.77 11.77 41.51 3.51
2343 2695 1.969064 CCACAAAATGGCGGACGGA 60.969 57.895 0.00 0.00 43.24 4.69
2352 2704 4.162690 GCGGACGGAAGGGAGCAT 62.163 66.667 0.00 0.00 0.00 3.79
2380 2732 5.734498 CCAAAGTTCAATATCGCTTTCTTCG 59.266 40.000 0.00 0.00 0.00 3.79
2405 2757 3.421844 GGATGTTTCAAGGGCTTACAGT 58.578 45.455 0.00 0.00 0.00 3.55
2544 2896 1.335496 GATAGAGCACGAGACCTGGTC 59.665 57.143 19.20 19.20 36.57 4.02
2732 3096 5.950023 ACCTGGATTTGCATCTAATCAGAT 58.050 37.500 10.86 0.00 42.52 2.90
2781 3145 1.972588 AACTGGGCTATGGTTCTCCT 58.027 50.000 0.00 0.00 34.23 3.69
2972 3339 1.225704 CCCTGCCTCAAGGTCATCC 59.774 63.158 0.00 0.00 35.34 3.51
2976 3343 2.190578 CCTCAAGGTCATCCGCCC 59.809 66.667 0.00 0.00 39.05 6.13
2979 3346 2.032860 CTCAAGGTCATCCGCCCGAT 62.033 60.000 0.00 0.00 39.05 4.18
3253 3710 2.898840 CGCAGCAGCCAGGGTATG 60.899 66.667 0.00 0.00 37.52 2.39
3271 3728 1.282875 GGTTCTCACCAAACGCAGC 59.717 57.895 0.00 0.00 43.61 5.25
3272 3729 1.444119 GGTTCTCACCAAACGCAGCA 61.444 55.000 0.00 0.00 43.61 4.41
3273 3730 0.040958 GTTCTCACCAAACGCAGCAG 60.041 55.000 0.00 0.00 0.00 4.24
3274 3731 0.463654 TTCTCACCAAACGCAGCAGT 60.464 50.000 0.00 0.00 0.00 4.40
3275 3732 0.463654 TCTCACCAAACGCAGCAGTT 60.464 50.000 0.00 0.00 35.59 3.16
3322 3809 1.832912 CCAGGGTATGGCTCTCACC 59.167 63.158 0.00 0.00 43.83 4.02
3323 3810 0.982852 CCAGGGTATGGCTCTCACCA 60.983 60.000 0.00 0.00 43.83 4.17
3324 3811 0.911769 CAGGGTATGGCTCTCACCAA 59.088 55.000 0.00 0.00 44.65 3.67
3325 3812 1.134280 CAGGGTATGGCTCTCACCAAG 60.134 57.143 0.00 0.00 44.65 3.61
3326 3813 1.204146 GGGTATGGCTCTCACCAAGA 58.796 55.000 0.00 0.00 44.65 3.02
3333 3820 3.140576 CTCTCACCAAGAGCAGCAG 57.859 57.895 0.00 0.00 44.95 4.24
3334 3821 1.004080 TCTCACCAAGAGCAGCAGC 60.004 57.895 0.00 0.00 44.35 5.25
3335 3822 2.033141 TCACCAAGAGCAGCAGCC 59.967 61.111 0.00 0.00 43.56 4.85
3336 3823 3.060615 CACCAAGAGCAGCAGCCC 61.061 66.667 0.00 0.00 43.56 5.19
3337 3824 3.573229 ACCAAGAGCAGCAGCCCA 61.573 61.111 0.00 0.00 43.56 5.36
3338 3825 2.750637 CCAAGAGCAGCAGCCCAG 60.751 66.667 0.00 0.00 43.56 4.45
3339 3826 2.750637 CAAGAGCAGCAGCCCAGG 60.751 66.667 0.00 0.00 43.56 4.45
3340 3827 3.255397 AAGAGCAGCAGCCCAGGT 61.255 61.111 0.00 0.00 43.56 4.00
3341 3828 1.920325 AAGAGCAGCAGCCCAGGTA 60.920 57.895 0.00 0.00 43.56 3.08
3342 3829 1.277580 AAGAGCAGCAGCCCAGGTAT 61.278 55.000 0.00 0.00 43.56 2.73
3343 3830 1.525535 GAGCAGCAGCCCAGGTATG 60.526 63.158 0.00 0.00 43.56 2.39
3605 4185 0.105964 TACCAAGCCCAACAGCCAAA 60.106 50.000 0.00 0.00 0.00 3.28
3713 4293 1.024579 GGGTATGGTGCACCTCAACG 61.025 60.000 34.75 0.00 34.29 4.10
3782 4362 0.889306 AGTGCTCGGACTCTACCAAC 59.111 55.000 0.00 0.00 0.00 3.77
3834 4414 0.719015 TTGGATCTCCTCCTCAGGGT 59.281 55.000 0.00 0.00 45.21 4.34
3915 4495 0.674895 GTTCGGGCATTGCTCAGAGT 60.675 55.000 9.60 0.00 0.00 3.24
3916 4496 0.391661 TTCGGGCATTGCTCAGAGTC 60.392 55.000 9.60 0.00 0.00 3.36
3942 4522 1.039856 ACAGTGGCCACATTGGAAAC 58.960 50.000 36.39 7.42 40.96 2.78
4021 4601 1.271926 ACTTTGGTACCCAGGCATCAC 60.272 52.381 10.07 0.00 33.81 3.06
4075 4655 2.380064 AAATGGCAACCTTGTCCTCA 57.620 45.000 0.00 0.00 30.03 3.86
4195 4775 7.288317 TGTTGTTTGTGCTTCTGTTTTAATG 57.712 32.000 0.00 0.00 0.00 1.90
4324 4906 2.289382 TGTTAGCCGATCAAGAACAGCA 60.289 45.455 0.00 0.00 0.00 4.41
4372 4954 6.717289 TGGCTGTAGTAATTTTGAGTACCAT 58.283 36.000 0.00 0.00 0.00 3.55
4521 5103 5.898972 TGCTGATCCTAATGCCCTTTATTTT 59.101 36.000 0.00 0.00 0.00 1.82
4528 5110 6.671779 TCCTAATGCCCTTTATTTTGTGGAAT 59.328 34.615 0.00 0.00 0.00 3.01
4656 5238 7.727181 ACTAATTATCCTGCTGTACTAACTGG 58.273 38.462 0.00 0.00 0.00 4.00
4671 5253 6.274157 ACTAACTGGTATCATCGATCATCC 57.726 41.667 0.00 0.00 0.00 3.51
4679 5261 4.533919 ATCATCGATCATCCTGAAGTCC 57.466 45.455 0.00 0.00 0.00 3.85
4690 5272 1.550524 CCTGAAGTCCGTCCTGATTGA 59.449 52.381 0.00 0.00 0.00 2.57
4693 5275 4.141937 CCTGAAGTCCGTCCTGATTGATAA 60.142 45.833 0.00 0.00 0.00 1.75
4713 5295 3.814504 AACAAGTCTGGATTGGATGGT 57.185 42.857 0.00 0.00 31.76 3.55
4773 5361 3.193395 TGTATGTACAACCCTCCTCCA 57.807 47.619 0.00 0.00 32.40 3.86
4789 5377 3.574396 TCCTCCATAGCTGCTACACATAC 59.426 47.826 12.26 0.00 0.00 2.39
4796 5384 1.209504 GCTGCTACACATACCCTTCCA 59.790 52.381 0.00 0.00 0.00 3.53
4809 5397 9.184523 CACATACCCTTCCAACTTTGATAATAA 57.815 33.333 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.963318 TGGCCAACATGATTGGTAAAAA 57.037 36.364 20.87 6.89 41.53 1.94
27 28 3.718434 ACTTCCTATGAGATTCATGGCCA 59.282 43.478 8.56 8.56 37.70 5.36
29 30 4.518211 CCAACTTCCTATGAGATTCATGGC 59.482 45.833 1.94 0.00 37.70 4.40
67 68 7.930217 TGAGTGTTTTAAGAACTGAGATTTGG 58.070 34.615 0.00 0.00 0.00 3.28
128 129 9.066892 ACTAACTTCAGATTATTGAAAGCAACA 57.933 29.630 0.00 0.00 36.69 3.33
156 157 9.072375 TCAAAAATTGTGATATGTTCAGTACCA 57.928 29.630 0.00 0.00 34.17 3.25
199 200 1.337823 ACTTTGGGTTGTCTCGATCCG 60.338 52.381 0.00 0.00 0.00 4.18
223 224 9.793252 CTGGATTATGAAAAGAACATAGTTTGG 57.207 33.333 0.00 0.00 32.88 3.28
258 259 7.415206 GCCCCATTTGTACATTAGAGTTTACAG 60.415 40.741 0.00 0.00 0.00 2.74
259 260 6.376018 GCCCCATTTGTACATTAGAGTTTACA 59.624 38.462 0.00 0.00 0.00 2.41
261 262 6.486056 TGCCCCATTTGTACATTAGAGTTTA 58.514 36.000 0.00 0.00 0.00 2.01
264 265 4.584638 TGCCCCATTTGTACATTAGAGT 57.415 40.909 0.00 0.00 0.00 3.24
269 270 8.317776 ACTTTATTATGCCCCATTTGTACATT 57.682 30.769 0.00 0.00 0.00 2.71
270 271 7.912778 ACTTTATTATGCCCCATTTGTACAT 57.087 32.000 0.00 0.00 0.00 2.29
309 310 3.074412 AGTCACATTTTAGCGGGTGAAG 58.926 45.455 0.00 0.00 41.45 3.02
312 313 3.749088 TGTTAGTCACATTTTAGCGGGTG 59.251 43.478 0.00 0.00 0.00 4.61
313 314 4.010667 TGTTAGTCACATTTTAGCGGGT 57.989 40.909 0.00 0.00 0.00 5.28
344 345 3.666274 GATTGATGATCTCAGGCAGGAG 58.334 50.000 0.00 0.22 34.68 3.69
347 348 2.224233 ACCGATTGATGATCTCAGGCAG 60.224 50.000 0.00 0.00 34.68 4.85
350 351 2.608998 CGGACCGATTGATGATCTCAGG 60.609 54.545 8.64 0.00 34.68 3.86
352 353 2.031870 ACGGACCGATTGATGATCTCA 58.968 47.619 23.38 0.00 32.30 3.27
353 354 2.398498 CACGGACCGATTGATGATCTC 58.602 52.381 23.38 0.00 32.30 2.75
356 357 0.830648 ACCACGGACCGATTGATGAT 59.169 50.000 23.38 0.00 0.00 2.45
375 376 3.706086 TGATCAGAGATCAATGTTCCGGA 59.294 43.478 0.00 0.00 0.00 5.14
376 377 4.056740 CTGATCAGAGATCAATGTTCCGG 58.943 47.826 18.34 0.00 0.00 5.14
377 378 4.056740 CCTGATCAGAGATCAATGTTCCG 58.943 47.826 24.62 0.00 0.00 4.30
378 379 5.287674 TCCTGATCAGAGATCAATGTTCC 57.712 43.478 24.62 0.00 0.00 3.62
379 380 6.111382 TGTTCCTGATCAGAGATCAATGTTC 58.889 40.000 24.62 0.00 0.00 3.18
380 381 6.058553 TGTTCCTGATCAGAGATCAATGTT 57.941 37.500 24.62 0.00 0.00 2.71
381 382 5.688814 TGTTCCTGATCAGAGATCAATGT 57.311 39.130 24.62 0.00 0.00 2.71
382 383 5.701750 GGATGTTCCTGATCAGAGATCAATG 59.298 44.000 24.62 4.68 32.53 2.82
383 384 5.221884 GGGATGTTCCTGATCAGAGATCAAT 60.222 44.000 24.62 12.08 36.57 2.57
384 385 4.102210 GGGATGTTCCTGATCAGAGATCAA 59.898 45.833 24.62 5.72 36.57 2.57
385 386 3.645212 GGGATGTTCCTGATCAGAGATCA 59.355 47.826 24.62 21.01 36.57 2.92
386 387 3.305950 CGGGATGTTCCTGATCAGAGATC 60.306 52.174 24.62 16.77 45.95 2.75
387 388 2.632028 CGGGATGTTCCTGATCAGAGAT 59.368 50.000 24.62 8.98 45.95 2.75
388 389 2.034878 CGGGATGTTCCTGATCAGAGA 58.965 52.381 24.62 15.92 45.95 3.10
389 390 2.034878 TCGGGATGTTCCTGATCAGAG 58.965 52.381 24.62 13.85 46.55 3.35
390 391 2.159179 TCGGGATGTTCCTGATCAGA 57.841 50.000 24.62 7.50 46.55 3.27
396 397 2.100916 AGTAACGATCGGGATGTTCCTG 59.899 50.000 20.98 0.00 44.41 3.86
397 398 2.361438 GAGTAACGATCGGGATGTTCCT 59.639 50.000 20.98 0.00 36.57 3.36
398 399 2.100252 TGAGTAACGATCGGGATGTTCC 59.900 50.000 20.98 0.00 35.23 3.62
399 400 3.114065 GTGAGTAACGATCGGGATGTTC 58.886 50.000 20.98 9.47 0.00 3.18
400 401 2.159142 GGTGAGTAACGATCGGGATGTT 60.159 50.000 20.98 6.60 0.00 2.71
401 402 1.407979 GGTGAGTAACGATCGGGATGT 59.592 52.381 20.98 0.00 0.00 3.06
402 403 1.407618 TGGTGAGTAACGATCGGGATG 59.592 52.381 20.98 0.00 0.00 3.51
403 404 1.771565 TGGTGAGTAACGATCGGGAT 58.228 50.000 20.98 7.80 0.00 3.85
404 405 1.548081 TTGGTGAGTAACGATCGGGA 58.452 50.000 20.98 3.28 0.00 5.14
405 406 1.997606 GTTTGGTGAGTAACGATCGGG 59.002 52.381 20.98 0.00 0.00 5.14
406 407 1.997606 GGTTTGGTGAGTAACGATCGG 59.002 52.381 20.98 1.23 0.00 4.18
407 408 1.652124 CGGTTTGGTGAGTAACGATCG 59.348 52.381 14.88 14.88 0.00 3.69
408 409 2.921754 CTCGGTTTGGTGAGTAACGATC 59.078 50.000 0.00 0.00 0.00 3.69
409 410 2.298163 ACTCGGTTTGGTGAGTAACGAT 59.702 45.455 0.00 0.00 43.36 3.73
410 411 1.682854 ACTCGGTTTGGTGAGTAACGA 59.317 47.619 0.00 0.00 43.36 3.85
411 412 2.144482 ACTCGGTTTGGTGAGTAACG 57.856 50.000 0.00 0.00 43.36 3.18
412 413 3.460103 TGAACTCGGTTTGGTGAGTAAC 58.540 45.455 0.00 0.00 44.36 2.50
413 414 3.823281 TGAACTCGGTTTGGTGAGTAA 57.177 42.857 0.00 0.00 44.36 2.24
414 415 3.322541 TGATGAACTCGGTTTGGTGAGTA 59.677 43.478 0.00 0.00 44.36 2.59
415 416 2.104111 TGATGAACTCGGTTTGGTGAGT 59.896 45.455 0.00 0.00 46.98 3.41
416 417 2.766313 TGATGAACTCGGTTTGGTGAG 58.234 47.619 0.00 0.00 38.21 3.51
417 418 2.920724 TGATGAACTCGGTTTGGTGA 57.079 45.000 0.00 0.00 0.00 4.02
418 419 3.424829 CGATTGATGAACTCGGTTTGGTG 60.425 47.826 0.00 0.00 0.00 4.17
419 420 2.742053 CGATTGATGAACTCGGTTTGGT 59.258 45.455 0.00 0.00 0.00 3.67
420 421 3.000041 TCGATTGATGAACTCGGTTTGG 59.000 45.455 0.00 0.00 33.38 3.28
421 422 4.568359 AGATCGATTGATGAACTCGGTTTG 59.432 41.667 0.00 0.00 34.09 2.93
422 423 4.568359 CAGATCGATTGATGAACTCGGTTT 59.432 41.667 0.00 0.00 34.09 3.27
423 424 4.115516 CAGATCGATTGATGAACTCGGTT 58.884 43.478 0.00 0.00 34.09 4.44
424 425 3.131223 ACAGATCGATTGATGAACTCGGT 59.869 43.478 0.00 0.00 34.09 4.69
425 426 3.711086 ACAGATCGATTGATGAACTCGG 58.289 45.455 0.00 0.00 34.09 4.63
426 427 4.354587 TGACAGATCGATTGATGAACTCG 58.645 43.478 0.00 0.00 34.09 4.18
427 428 6.144241 CAGATGACAGATCGATTGATGAACTC 59.856 42.308 0.00 0.39 34.09 3.01
428 429 5.984323 CAGATGACAGATCGATTGATGAACT 59.016 40.000 0.00 0.00 34.09 3.01
429 430 5.981915 TCAGATGACAGATCGATTGATGAAC 59.018 40.000 0.00 1.37 34.09 3.18
430 431 5.981915 GTCAGATGACAGATCGATTGATGAA 59.018 40.000 8.09 0.00 44.18 2.57
431 432 5.527033 GTCAGATGACAGATCGATTGATGA 58.473 41.667 8.09 0.00 44.18 2.92
432 433 5.825905 GTCAGATGACAGATCGATTGATG 57.174 43.478 8.09 1.91 44.18 3.07
445 446 4.932200 CCTACAGGTTTTGAGTCAGATGAC 59.068 45.833 4.77 4.77 45.08 3.06
446 447 4.020218 CCCTACAGGTTTTGAGTCAGATGA 60.020 45.833 0.00 0.00 0.00 2.92
447 448 4.256920 CCCTACAGGTTTTGAGTCAGATG 58.743 47.826 0.00 0.00 0.00 2.90
448 449 3.264450 CCCCTACAGGTTTTGAGTCAGAT 59.736 47.826 0.00 0.00 0.00 2.90
449 450 2.637872 CCCCTACAGGTTTTGAGTCAGA 59.362 50.000 0.00 0.00 0.00 3.27
450 451 2.290323 CCCCCTACAGGTTTTGAGTCAG 60.290 54.545 0.00 0.00 0.00 3.51
451 452 1.702957 CCCCCTACAGGTTTTGAGTCA 59.297 52.381 0.00 0.00 0.00 3.41
452 453 1.703513 ACCCCCTACAGGTTTTGAGTC 59.296 52.381 0.00 0.00 32.05 3.36
453 454 1.829138 ACCCCCTACAGGTTTTGAGT 58.171 50.000 0.00 0.00 32.05 3.41
454 455 2.640826 TGTACCCCCTACAGGTTTTGAG 59.359 50.000 0.00 0.00 38.89 3.02
455 456 2.703947 TGTACCCCCTACAGGTTTTGA 58.296 47.619 0.00 0.00 38.89 2.69
456 457 3.732048 ATGTACCCCCTACAGGTTTTG 57.268 47.619 0.00 0.00 38.80 2.44
457 458 4.853856 AGTAATGTACCCCCTACAGGTTTT 59.146 41.667 0.00 0.00 38.80 2.43
458 459 4.441757 AGTAATGTACCCCCTACAGGTTT 58.558 43.478 0.00 0.00 38.80 3.27
459 460 4.084466 AGTAATGTACCCCCTACAGGTT 57.916 45.455 0.00 0.00 38.80 3.50
460 461 3.790022 AGTAATGTACCCCCTACAGGT 57.210 47.619 0.00 0.00 38.80 4.00
461 462 5.446260 AAAAGTAATGTACCCCCTACAGG 57.554 43.478 0.00 0.00 38.80 4.00
462 463 6.478129 TCAAAAAGTAATGTACCCCCTACAG 58.522 40.000 0.00 0.00 38.80 2.74
463 464 6.451292 TCAAAAAGTAATGTACCCCCTACA 57.549 37.500 0.00 0.00 39.78 2.74
464 465 6.128200 CGTTCAAAAAGTAATGTACCCCCTAC 60.128 42.308 0.00 0.00 0.00 3.18
465 466 5.939296 CGTTCAAAAAGTAATGTACCCCCTA 59.061 40.000 0.00 0.00 0.00 3.53
466 467 4.763279 CGTTCAAAAAGTAATGTACCCCCT 59.237 41.667 0.00 0.00 0.00 4.79
467 468 4.761227 TCGTTCAAAAAGTAATGTACCCCC 59.239 41.667 0.00 0.00 0.00 5.40
468 469 5.106436 CCTCGTTCAAAAAGTAATGTACCCC 60.106 44.000 0.00 0.00 0.00 4.95
469 470 5.702209 TCCTCGTTCAAAAAGTAATGTACCC 59.298 40.000 0.00 0.00 0.00 3.69
470 471 6.647895 TCTCCTCGTTCAAAAAGTAATGTACC 59.352 38.462 0.00 0.00 0.00 3.34
471 472 7.384387 ACTCTCCTCGTTCAAAAAGTAATGTAC 59.616 37.037 0.00 0.00 0.00 2.90
472 473 7.439381 ACTCTCCTCGTTCAAAAAGTAATGTA 58.561 34.615 0.00 0.00 0.00 2.29
473 474 6.289064 ACTCTCCTCGTTCAAAAAGTAATGT 58.711 36.000 0.00 0.00 0.00 2.71
474 475 6.787085 ACTCTCCTCGTTCAAAAAGTAATG 57.213 37.500 0.00 0.00 0.00 1.90
475 476 6.990349 TCAACTCTCCTCGTTCAAAAAGTAAT 59.010 34.615 0.00 0.00 0.00 1.89
476 477 6.342906 TCAACTCTCCTCGTTCAAAAAGTAA 58.657 36.000 0.00 0.00 0.00 2.24
477 478 5.909477 TCAACTCTCCTCGTTCAAAAAGTA 58.091 37.500 0.00 0.00 0.00 2.24
478 479 4.766375 TCAACTCTCCTCGTTCAAAAAGT 58.234 39.130 0.00 0.00 0.00 2.66
479 480 5.734855 TTCAACTCTCCTCGTTCAAAAAG 57.265 39.130 0.00 0.00 0.00 2.27
480 481 6.503589 TTTTCAACTCTCCTCGTTCAAAAA 57.496 33.333 0.00 0.00 0.00 1.94
481 482 6.317642 TCATTTTCAACTCTCCTCGTTCAAAA 59.682 34.615 0.00 0.00 30.88 2.44
482 483 5.820423 TCATTTTCAACTCTCCTCGTTCAAA 59.180 36.000 0.00 0.00 0.00 2.69
483 484 5.364778 TCATTTTCAACTCTCCTCGTTCAA 58.635 37.500 0.00 0.00 0.00 2.69
484 485 4.956085 TCATTTTCAACTCTCCTCGTTCA 58.044 39.130 0.00 0.00 0.00 3.18
485 486 5.612709 CGTTCATTTTCAACTCTCCTCGTTC 60.613 44.000 0.00 0.00 0.00 3.95
486 487 4.211374 CGTTCATTTTCAACTCTCCTCGTT 59.789 41.667 0.00 0.00 0.00 3.85
487 488 3.741344 CGTTCATTTTCAACTCTCCTCGT 59.259 43.478 0.00 0.00 0.00 4.18
488 489 3.123621 CCGTTCATTTTCAACTCTCCTCG 59.876 47.826 0.00 0.00 0.00 4.63
489 490 4.152580 GTCCGTTCATTTTCAACTCTCCTC 59.847 45.833 0.00 0.00 0.00 3.71
490 491 4.065789 GTCCGTTCATTTTCAACTCTCCT 58.934 43.478 0.00 0.00 0.00 3.69
491 492 3.120649 CGTCCGTTCATTTTCAACTCTCC 60.121 47.826 0.00 0.00 0.00 3.71
492 493 3.739300 TCGTCCGTTCATTTTCAACTCTC 59.261 43.478 0.00 0.00 0.00 3.20
493 494 3.724374 TCGTCCGTTCATTTTCAACTCT 58.276 40.909 0.00 0.00 0.00 3.24
494 495 4.461992 TTCGTCCGTTCATTTTCAACTC 57.538 40.909 0.00 0.00 0.00 3.01
495 496 4.886247 TTTCGTCCGTTCATTTTCAACT 57.114 36.364 0.00 0.00 0.00 3.16
496 497 5.935448 TTTTTCGTCCGTTCATTTTCAAC 57.065 34.783 0.00 0.00 0.00 3.18
515 516 7.619302 ACCATATGTATGACAAGGACCATTTTT 59.381 33.333 1.24 0.00 35.75 1.94
516 517 7.125391 ACCATATGTATGACAAGGACCATTTT 58.875 34.615 1.24 0.00 35.75 1.82
517 518 6.672593 ACCATATGTATGACAAGGACCATTT 58.327 36.000 1.24 0.00 35.75 2.32
518 519 6.266131 ACCATATGTATGACAAGGACCATT 57.734 37.500 1.24 0.00 35.75 3.16
519 520 5.912149 ACCATATGTATGACAAGGACCAT 57.088 39.130 1.24 0.00 35.75 3.55
520 521 5.428457 AGAACCATATGTATGACAAGGACCA 59.572 40.000 1.24 0.00 35.75 4.02
521 522 5.930135 AGAACCATATGTATGACAAGGACC 58.070 41.667 1.24 0.00 35.75 4.46
522 523 7.770897 AGAAAGAACCATATGTATGACAAGGAC 59.229 37.037 1.24 0.00 35.75 3.85
523 524 7.861629 AGAAAGAACCATATGTATGACAAGGA 58.138 34.615 1.24 0.00 35.75 3.36
524 525 8.400947 CAAGAAAGAACCATATGTATGACAAGG 58.599 37.037 1.24 0.00 35.75 3.61
525 526 7.912250 GCAAGAAAGAACCATATGTATGACAAG 59.088 37.037 1.24 0.00 35.75 3.16
526 527 7.611467 AGCAAGAAAGAACCATATGTATGACAA 59.389 33.333 1.24 0.00 35.75 3.18
527 528 7.112122 AGCAAGAAAGAACCATATGTATGACA 58.888 34.615 1.24 0.00 35.75 3.58
528 529 7.559590 AGCAAGAAAGAACCATATGTATGAC 57.440 36.000 1.24 0.00 35.75 3.06
537 538 9.553064 CTCATAACTATAGCAAGAAAGAACCAT 57.447 33.333 0.00 0.00 0.00 3.55
538 539 7.987458 CCTCATAACTATAGCAAGAAAGAACCA 59.013 37.037 0.00 0.00 0.00 3.67
539 540 7.442666 CCCTCATAACTATAGCAAGAAAGAACC 59.557 40.741 0.00 0.00 0.00 3.62
540 541 7.988028 ACCCTCATAACTATAGCAAGAAAGAAC 59.012 37.037 0.00 0.00 0.00 3.01
541 542 8.090788 ACCCTCATAACTATAGCAAGAAAGAA 57.909 34.615 0.00 0.00 0.00 2.52
542 543 7.676683 ACCCTCATAACTATAGCAAGAAAGA 57.323 36.000 0.00 0.00 0.00 2.52
545 546 9.824216 AGTATACCCTCATAACTATAGCAAGAA 57.176 33.333 0.00 0.00 0.00 2.52
546 547 9.463902 GAGTATACCCTCATAACTATAGCAAGA 57.536 37.037 0.00 0.00 0.00 3.02
547 548 9.469097 AGAGTATACCCTCATAACTATAGCAAG 57.531 37.037 0.00 0.00 33.75 4.01
548 549 9.824216 AAGAGTATACCCTCATAACTATAGCAA 57.176 33.333 0.00 0.00 33.75 3.91
549 550 9.244292 CAAGAGTATACCCTCATAACTATAGCA 57.756 37.037 0.00 0.00 33.75 3.49
550 551 9.463902 TCAAGAGTATACCCTCATAACTATAGC 57.536 37.037 0.00 0.00 33.75 2.97
552 553 9.976776 CCTCAAGAGTATACCCTCATAACTATA 57.023 37.037 0.00 0.00 33.75 1.31
553 554 8.679725 TCCTCAAGAGTATACCCTCATAACTAT 58.320 37.037 0.00 0.00 33.75 2.12
554 555 8.053776 TCCTCAAGAGTATACCCTCATAACTA 57.946 38.462 0.00 0.00 33.75 2.24
555 556 6.923670 TCCTCAAGAGTATACCCTCATAACT 58.076 40.000 0.00 0.00 33.75 2.24
556 557 7.256012 CCTTCCTCAAGAGTATACCCTCATAAC 60.256 44.444 0.00 0.00 33.75 1.89
557 558 6.782988 CCTTCCTCAAGAGTATACCCTCATAA 59.217 42.308 0.00 0.00 33.75 1.90
558 559 6.104243 TCCTTCCTCAAGAGTATACCCTCATA 59.896 42.308 0.00 0.00 33.75 2.15
559 560 5.103043 TCCTTCCTCAAGAGTATACCCTCAT 60.103 44.000 0.00 0.00 33.75 2.90
560 561 4.232122 TCCTTCCTCAAGAGTATACCCTCA 59.768 45.833 0.00 0.00 33.75 3.86
561 562 4.805744 TCCTTCCTCAAGAGTATACCCTC 58.194 47.826 0.00 0.00 0.00 4.30
562 563 4.901785 TCCTTCCTCAAGAGTATACCCT 57.098 45.455 0.00 0.00 0.00 4.34
563 564 4.528987 GGATCCTTCCTCAAGAGTATACCC 59.471 50.000 3.84 0.00 39.14 3.69
564 565 5.731957 GGATCCTTCCTCAAGAGTATACC 57.268 47.826 3.84 0.00 39.14 2.73
575 576 6.152334 GTTGCAAACGAAGGATCCTTCCTC 62.152 50.000 37.51 24.86 44.53 3.71
576 577 4.367042 GTTGCAAACGAAGGATCCTTCCT 61.367 47.826 37.51 27.93 46.24 3.36
577 578 1.821216 TGCAAACGAAGGATCCTTCC 58.179 50.000 37.51 26.86 47.00 3.46
578 579 3.203161 GTTGCAAACGAAGGATCCTTC 57.797 47.619 35.56 35.56 46.41 3.46
591 592 6.597672 AGAATATCGACTATGTTGGTTGCAAA 59.402 34.615 0.00 0.00 0.00 3.68
592 593 6.037062 CAGAATATCGACTATGTTGGTTGCAA 59.963 38.462 0.00 0.00 0.00 4.08
593 594 5.523552 CAGAATATCGACTATGTTGGTTGCA 59.476 40.000 0.00 0.00 0.00 4.08
594 595 5.523916 ACAGAATATCGACTATGTTGGTTGC 59.476 40.000 0.00 0.00 0.00 4.17
595 596 7.277760 TCAACAGAATATCGACTATGTTGGTTG 59.722 37.037 21.63 14.55 44.66 3.77
596 597 7.327975 TCAACAGAATATCGACTATGTTGGTT 58.672 34.615 21.63 5.81 44.66 3.67
597 598 6.873997 TCAACAGAATATCGACTATGTTGGT 58.126 36.000 21.63 7.25 44.66 3.67
598 599 6.422100 CCTCAACAGAATATCGACTATGTTGG 59.578 42.308 21.63 15.49 44.66 3.77
599 600 6.422100 CCCTCAACAGAATATCGACTATGTTG 59.578 42.308 18.40 18.40 45.46 3.33
600 601 6.516718 CCCTCAACAGAATATCGACTATGTT 58.483 40.000 0.00 0.00 0.00 2.71
601 602 5.509840 GCCCTCAACAGAATATCGACTATGT 60.510 44.000 0.00 0.00 0.00 2.29
602 603 4.926238 GCCCTCAACAGAATATCGACTATG 59.074 45.833 0.00 0.00 0.00 2.23
603 604 4.835615 AGCCCTCAACAGAATATCGACTAT 59.164 41.667 0.00 0.00 0.00 2.12
604 605 4.215908 AGCCCTCAACAGAATATCGACTA 58.784 43.478 0.00 0.00 0.00 2.59
605 606 3.034635 AGCCCTCAACAGAATATCGACT 58.965 45.455 0.00 0.00 0.00 4.18
606 607 3.181475 TGAGCCCTCAACAGAATATCGAC 60.181 47.826 0.00 0.00 36.53 4.20
607 608 3.031013 TGAGCCCTCAACAGAATATCGA 58.969 45.455 0.00 0.00 36.53 3.59
608 609 3.126831 GTGAGCCCTCAACAGAATATCG 58.873 50.000 0.00 0.00 41.85 2.92
609 610 3.126831 CGTGAGCCCTCAACAGAATATC 58.873 50.000 0.00 0.00 41.85 1.63
610 611 2.766263 TCGTGAGCCCTCAACAGAATAT 59.234 45.455 0.00 0.00 41.85 1.28
611 612 2.176045 TCGTGAGCCCTCAACAGAATA 58.824 47.619 0.00 0.00 41.85 1.75
612 613 0.976641 TCGTGAGCCCTCAACAGAAT 59.023 50.000 0.00 0.00 41.85 2.40
613 614 0.756294 TTCGTGAGCCCTCAACAGAA 59.244 50.000 0.00 4.24 41.85 3.02
614 615 0.318441 CTTCGTGAGCCCTCAACAGA 59.682 55.000 0.00 0.00 41.85 3.41
615 616 1.294659 GCTTCGTGAGCCCTCAACAG 61.295 60.000 0.00 0.00 46.01 3.16
616 617 1.301716 GCTTCGTGAGCCCTCAACA 60.302 57.895 0.00 0.00 46.01 3.33
617 618 3.567473 GCTTCGTGAGCCCTCAAC 58.433 61.111 0.00 0.00 46.01 3.18
630 631 2.211353 GTCTATGGGACGAGTGCTTC 57.789 55.000 0.00 0.00 35.07 3.86
639 640 3.315749 AGATTTCGTCTCGTCTATGGGAC 59.684 47.826 0.00 0.00 41.28 4.46
640 641 3.552875 AGATTTCGTCTCGTCTATGGGA 58.447 45.455 0.00 0.00 28.45 4.37
641 642 3.992260 AGATTTCGTCTCGTCTATGGG 57.008 47.619 0.00 0.00 28.45 4.00
642 643 6.918569 ACAAATAGATTTCGTCTCGTCTATGG 59.081 38.462 0.00 0.00 38.42 2.74
643 644 7.113684 GGACAAATAGATTTCGTCTCGTCTATG 59.886 40.741 12.84 0.00 38.42 2.23
644 645 7.140048 GGACAAATAGATTTCGTCTCGTCTAT 58.860 38.462 12.84 0.00 38.42 1.98
645 646 6.493116 GGACAAATAGATTTCGTCTCGTCTA 58.507 40.000 12.84 0.00 38.42 2.59
646 647 5.341617 GGACAAATAGATTTCGTCTCGTCT 58.658 41.667 12.84 0.00 38.42 4.18
647 648 4.204573 CGGACAAATAGATTTCGTCTCGTC 59.795 45.833 12.84 0.00 38.42 4.20
648 649 4.103357 CGGACAAATAGATTTCGTCTCGT 58.897 43.478 12.84 0.00 38.42 4.18
649 650 4.348656 TCGGACAAATAGATTTCGTCTCG 58.651 43.478 12.84 13.39 38.42 4.04
650 651 6.642683 TTTCGGACAAATAGATTTCGTCTC 57.357 37.500 12.84 6.69 38.42 3.36
651 652 6.456988 GCATTTCGGACAAATAGATTTCGTCT 60.457 38.462 12.84 0.00 41.11 4.18
652 653 5.677178 GCATTTCGGACAAATAGATTTCGTC 59.323 40.000 8.10 8.10 32.31 4.20
653 654 5.569413 GCATTTCGGACAAATAGATTTCGT 58.431 37.500 0.00 0.00 0.00 3.85
654 655 4.666176 CGCATTTCGGACAAATAGATTTCG 59.334 41.667 0.00 0.00 33.78 3.46
655 656 4.437820 GCGCATTTCGGACAAATAGATTTC 59.562 41.667 0.30 0.00 38.94 2.17
656 657 4.351192 GCGCATTTCGGACAAATAGATTT 58.649 39.130 0.30 0.00 38.94 2.17
657 658 3.243068 GGCGCATTTCGGACAAATAGATT 60.243 43.478 10.83 0.00 38.94 2.40
658 659 2.290641 GGCGCATTTCGGACAAATAGAT 59.709 45.455 10.83 0.00 38.94 1.98
659 660 1.668751 GGCGCATTTCGGACAAATAGA 59.331 47.619 10.83 0.00 38.94 1.98
660 661 1.594518 CGGCGCATTTCGGACAAATAG 60.595 52.381 10.83 0.00 38.94 1.73
661 662 0.375454 CGGCGCATTTCGGACAAATA 59.625 50.000 10.83 0.00 38.94 1.40
662 663 1.136565 CGGCGCATTTCGGACAAAT 59.863 52.632 10.83 0.00 38.94 2.32
663 664 2.558821 CGGCGCATTTCGGACAAA 59.441 55.556 10.83 0.00 38.94 2.83
668 669 2.395360 TTTCTCCGGCGCATTTCGG 61.395 57.895 15.56 15.56 46.89 4.30
669 670 1.226018 GTTTCTCCGGCGCATTTCG 60.226 57.895 10.83 2.64 42.12 3.46
670 671 0.179189 CTGTTTCTCCGGCGCATTTC 60.179 55.000 10.83 0.00 0.00 2.17
671 672 0.605319 TCTGTTTCTCCGGCGCATTT 60.605 50.000 10.83 0.00 0.00 2.32
672 673 1.003839 TCTGTTTCTCCGGCGCATT 60.004 52.632 10.83 0.00 0.00 3.56
673 674 1.448540 CTCTGTTTCTCCGGCGCAT 60.449 57.895 10.83 0.00 0.00 4.73
674 675 2.048222 CTCTGTTTCTCCGGCGCA 60.048 61.111 10.83 0.00 0.00 6.09
675 676 2.095252 GTCTCTGTTTCTCCGGCGC 61.095 63.158 0.00 0.00 0.00 6.53
676 677 0.108615 ATGTCTCTGTTTCTCCGGCG 60.109 55.000 0.00 0.00 0.00 6.46
677 678 2.961526 TATGTCTCTGTTTCTCCGGC 57.038 50.000 0.00 0.00 0.00 6.13
678 679 5.238583 ACTTTTATGTCTCTGTTTCTCCGG 58.761 41.667 0.00 0.00 0.00 5.14
679 680 5.061064 CGACTTTTATGTCTCTGTTTCTCCG 59.939 44.000 0.00 0.00 35.00 4.63
680 681 5.163943 GCGACTTTTATGTCTCTGTTTCTCC 60.164 44.000 0.00 0.00 35.00 3.71
681 682 5.405571 TGCGACTTTTATGTCTCTGTTTCTC 59.594 40.000 0.00 0.00 35.00 2.87
682 683 5.297547 TGCGACTTTTATGTCTCTGTTTCT 58.702 37.500 0.00 0.00 35.00 2.52
683 684 5.591643 TGCGACTTTTATGTCTCTGTTTC 57.408 39.130 0.00 0.00 35.00 2.78
684 685 5.934625 AGATGCGACTTTTATGTCTCTGTTT 59.065 36.000 0.00 0.00 35.00 2.83
685 686 5.482908 AGATGCGACTTTTATGTCTCTGTT 58.517 37.500 0.00 0.00 35.00 3.16
686 687 5.078411 AGATGCGACTTTTATGTCTCTGT 57.922 39.130 0.00 0.00 35.00 3.41
687 688 5.578336 TGAAGATGCGACTTTTATGTCTCTG 59.422 40.000 0.00 0.00 35.00 3.35
688 689 5.724328 TGAAGATGCGACTTTTATGTCTCT 58.276 37.500 0.00 0.00 35.00 3.10
689 690 6.256539 TCATGAAGATGCGACTTTTATGTCTC 59.743 38.462 0.00 0.00 35.00 3.36
690 691 6.036517 GTCATGAAGATGCGACTTTTATGTCT 59.963 38.462 0.00 0.00 35.00 3.41
691 692 6.036517 AGTCATGAAGATGCGACTTTTATGTC 59.963 38.462 0.00 11.23 35.18 3.06
692 693 5.877012 AGTCATGAAGATGCGACTTTTATGT 59.123 36.000 0.00 0.00 35.18 2.29
693 694 6.355397 AGTCATGAAGATGCGACTTTTATG 57.645 37.500 0.00 11.08 35.18 1.90
694 695 5.525378 GGAGTCATGAAGATGCGACTTTTAT 59.475 40.000 0.00 0.00 38.80 1.40
695 696 4.870426 GGAGTCATGAAGATGCGACTTTTA 59.130 41.667 0.00 0.00 38.80 1.52
696 697 3.686726 GGAGTCATGAAGATGCGACTTTT 59.313 43.478 0.00 0.00 38.80 2.27
697 698 3.055530 AGGAGTCATGAAGATGCGACTTT 60.056 43.478 0.00 0.00 38.80 2.66
698 699 2.499289 AGGAGTCATGAAGATGCGACTT 59.501 45.455 0.00 0.00 38.80 3.01
699 700 2.100584 GAGGAGTCATGAAGATGCGACT 59.899 50.000 0.00 0.00 41.32 4.18
700 701 2.159184 TGAGGAGTCATGAAGATGCGAC 60.159 50.000 0.00 0.00 0.00 5.19
701 702 2.102578 TGAGGAGTCATGAAGATGCGA 58.897 47.619 0.00 0.00 0.00 5.10
702 703 2.591571 TGAGGAGTCATGAAGATGCG 57.408 50.000 0.00 0.00 0.00 4.73
703 704 5.549347 ACATATGAGGAGTCATGAAGATGC 58.451 41.667 10.38 0.00 43.66 3.91
704 705 5.862860 CGACATATGAGGAGTCATGAAGATG 59.137 44.000 10.38 0.00 43.66 2.90
705 706 5.047448 CCGACATATGAGGAGTCATGAAGAT 60.047 44.000 10.38 0.00 43.66 2.40
706 707 4.279420 CCGACATATGAGGAGTCATGAAGA 59.721 45.833 10.38 0.00 43.66 2.87
707 708 4.554292 CCGACATATGAGGAGTCATGAAG 58.446 47.826 10.38 0.00 43.66 3.02
708 709 3.321968 CCCGACATATGAGGAGTCATGAA 59.678 47.826 18.85 0.00 43.66 2.57
709 710 2.893489 CCCGACATATGAGGAGTCATGA 59.107 50.000 18.85 0.00 43.66 3.07
710 711 2.611473 GCCCGACATATGAGGAGTCATG 60.611 54.545 18.85 0.00 43.66 3.07
711 712 1.620819 GCCCGACATATGAGGAGTCAT 59.379 52.381 18.85 0.00 45.82 3.06
712 713 1.040646 GCCCGACATATGAGGAGTCA 58.959 55.000 18.85 0.00 37.02 3.41
713 714 1.040646 TGCCCGACATATGAGGAGTC 58.959 55.000 18.85 10.56 0.00 3.36
714 715 0.753262 GTGCCCGACATATGAGGAGT 59.247 55.000 18.85 0.00 0.00 3.85
715 716 0.752658 TGTGCCCGACATATGAGGAG 59.247 55.000 18.85 12.03 0.00 3.69
716 717 1.199615 TTGTGCCCGACATATGAGGA 58.800 50.000 18.85 2.61 33.40 3.71
717 718 2.036958 TTTGTGCCCGACATATGAGG 57.963 50.000 10.38 11.90 33.40 3.86
718 719 3.731867 GCTTTTTGTGCCCGACATATGAG 60.732 47.826 10.38 2.85 33.40 2.90
719 720 2.163412 GCTTTTTGTGCCCGACATATGA 59.837 45.455 10.38 0.00 33.40 2.15
720 721 2.164219 AGCTTTTTGTGCCCGACATATG 59.836 45.455 0.00 0.00 33.40 1.78
721 722 2.423538 GAGCTTTTTGTGCCCGACATAT 59.576 45.455 0.00 0.00 33.40 1.78
722 723 1.810151 GAGCTTTTTGTGCCCGACATA 59.190 47.619 0.00 0.00 33.40 2.29
723 724 0.598065 GAGCTTTTTGTGCCCGACAT 59.402 50.000 0.00 0.00 33.40 3.06
724 725 1.781025 CGAGCTTTTTGTGCCCGACA 61.781 55.000 0.00 0.00 33.56 4.35
725 726 1.082104 CGAGCTTTTTGTGCCCGAC 60.082 57.895 0.00 0.00 33.56 4.79
726 727 2.903547 GCGAGCTTTTTGTGCCCGA 61.904 57.895 0.00 0.00 33.56 5.14
727 728 1.573829 TAGCGAGCTTTTTGTGCCCG 61.574 55.000 1.86 0.00 34.83 6.13
728 729 0.596082 TTAGCGAGCTTTTTGTGCCC 59.404 50.000 1.86 0.00 0.00 5.36
729 730 2.415697 TTTAGCGAGCTTTTTGTGCC 57.584 45.000 1.86 0.00 0.00 5.01
730 731 4.915085 TGTATTTTAGCGAGCTTTTTGTGC 59.085 37.500 1.86 0.00 0.00 4.57
731 732 6.801377 TGATGTATTTTAGCGAGCTTTTTGTG 59.199 34.615 1.86 0.00 0.00 3.33
732 733 6.908825 TGATGTATTTTAGCGAGCTTTTTGT 58.091 32.000 1.86 0.00 0.00 2.83
733 734 6.470235 CCTGATGTATTTTAGCGAGCTTTTTG 59.530 38.462 1.86 0.00 0.00 2.44
734 735 6.374333 TCCTGATGTATTTTAGCGAGCTTTTT 59.626 34.615 1.86 0.00 0.00 1.94
735 736 5.880332 TCCTGATGTATTTTAGCGAGCTTTT 59.120 36.000 1.86 0.00 0.00 2.27
736 737 5.294552 GTCCTGATGTATTTTAGCGAGCTTT 59.705 40.000 1.86 0.00 0.00 3.51
737 738 4.811557 GTCCTGATGTATTTTAGCGAGCTT 59.188 41.667 1.86 0.00 0.00 3.74
738 739 4.372656 GTCCTGATGTATTTTAGCGAGCT 58.627 43.478 2.25 2.25 0.00 4.09
739 740 3.495001 GGTCCTGATGTATTTTAGCGAGC 59.505 47.826 0.00 0.00 0.00 5.03
740 741 4.950050 AGGTCCTGATGTATTTTAGCGAG 58.050 43.478 0.00 0.00 0.00 5.03
741 742 4.649674 AGAGGTCCTGATGTATTTTAGCGA 59.350 41.667 0.00 0.00 0.00 4.93
742 743 4.950050 AGAGGTCCTGATGTATTTTAGCG 58.050 43.478 0.00 0.00 0.00 4.26
743 744 7.041712 GCTAAAGAGGTCCTGATGTATTTTAGC 60.042 40.741 0.00 6.99 41.43 3.09
744 745 7.987458 TGCTAAAGAGGTCCTGATGTATTTTAG 59.013 37.037 0.00 1.25 0.00 1.85
745 746 7.857456 TGCTAAAGAGGTCCTGATGTATTTTA 58.143 34.615 0.00 0.00 0.00 1.52
746 747 6.721318 TGCTAAAGAGGTCCTGATGTATTTT 58.279 36.000 0.00 0.00 0.00 1.82
747 748 6.313519 TGCTAAAGAGGTCCTGATGTATTT 57.686 37.500 0.00 0.00 0.00 1.40
748 749 5.957771 TGCTAAAGAGGTCCTGATGTATT 57.042 39.130 0.00 0.00 0.00 1.89
753 754 5.374921 CATGAATGCTAAAGAGGTCCTGAT 58.625 41.667 0.00 0.00 0.00 2.90
756 757 3.525199 ACCATGAATGCTAAAGAGGTCCT 59.475 43.478 0.00 0.00 0.00 3.85
797 798 4.606255 TCTCCCCACCCTTTCTATTTCTTT 59.394 41.667 0.00 0.00 0.00 2.52
926 929 4.422073 AGGATTTGTGTGTCAACAGAGA 57.578 40.909 0.00 0.00 36.84 3.10
927 930 4.452455 GGTAGGATTTGTGTGTCAACAGAG 59.548 45.833 0.00 0.00 36.84 3.35
1902 2254 3.494626 GCGTCATCTTGAACTTCTTGTCA 59.505 43.478 0.00 0.00 0.00 3.58
1989 2341 1.021390 CGAACATGGTCTCCCACAGC 61.021 60.000 9.52 0.00 45.65 4.40
2005 2357 2.280524 CGGGCTGTGGTTGTCGAA 60.281 61.111 0.00 0.00 0.00 3.71
2130 2482 1.073964 CGTCCATCTGCACAGTCTTG 58.926 55.000 0.00 0.00 0.00 3.02
2135 2487 2.447887 GCGACGTCCATCTGCACAG 61.448 63.158 10.58 0.00 0.00 3.66
2217 2569 1.852633 TGCTCTCCATCTCCTCGAAA 58.147 50.000 0.00 0.00 0.00 3.46
2274 2626 1.337817 CCTTGAAGCACGAGTCGACG 61.338 60.000 21.50 10.91 39.31 5.12
2343 2695 1.305549 CTTTGGCCCATGCTCCCTT 60.306 57.895 0.00 0.00 37.74 3.95
2352 2704 1.748493 GCGATATTGAACTTTGGCCCA 59.252 47.619 0.00 0.00 0.00 5.36
2380 2732 2.044123 AGCCCTTGAAACATCCGATC 57.956 50.000 0.00 0.00 0.00 3.69
2405 2757 1.059098 ATCATCAATCCGGCCAGCTA 58.941 50.000 2.24 0.00 0.00 3.32
2469 2821 1.002134 CTCAAAGGTGGCCGTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
2521 2873 1.336440 CAGGTCTCGTGCTCTATCCAG 59.664 57.143 0.00 0.00 0.00 3.86
2544 2896 2.593978 CCTCTGGCCATGTCCCTG 59.406 66.667 5.51 0.00 0.00 4.45
2972 3339 0.676782 AGAGGAACCAAAATCGGGCG 60.677 55.000 0.00 0.00 0.00 6.13
2976 3343 0.727398 GGCGAGAGGAACCAAAATCG 59.273 55.000 0.00 0.00 0.00 3.34
2979 3346 0.476771 AAGGGCGAGAGGAACCAAAA 59.523 50.000 0.00 0.00 0.00 2.44
3216 3613 0.531532 CTTGCTGAGAGCCATACCCG 60.532 60.000 0.00 0.00 41.51 5.28
3246 3703 2.290071 CGTTTGGTGAGAACCATACCCT 60.290 50.000 11.33 0.00 39.86 4.34
3247 3704 2.081462 CGTTTGGTGAGAACCATACCC 58.919 52.381 11.33 0.00 39.86 3.69
3248 3705 1.467342 GCGTTTGGTGAGAACCATACC 59.533 52.381 11.33 0.00 39.86 2.73
3249 3706 2.147958 TGCGTTTGGTGAGAACCATAC 58.852 47.619 8.03 8.03 39.86 2.39
3250 3707 2.422597 CTGCGTTTGGTGAGAACCATA 58.577 47.619 0.00 0.00 39.86 2.74
3251 3708 1.238439 CTGCGTTTGGTGAGAACCAT 58.762 50.000 0.00 0.00 39.86 3.55
3252 3709 1.444119 GCTGCGTTTGGTGAGAACCA 61.444 55.000 0.00 0.00 38.14 3.67
3253 3710 1.282875 GCTGCGTTTGGTGAGAACC 59.717 57.895 0.00 0.00 0.00 3.62
3254 3711 0.040958 CTGCTGCGTTTGGTGAGAAC 60.041 55.000 0.00 0.00 0.00 3.01
3255 3712 0.463654 ACTGCTGCGTTTGGTGAGAA 60.464 50.000 0.00 0.00 0.00 2.87
3256 3713 0.463654 AACTGCTGCGTTTGGTGAGA 60.464 50.000 0.00 0.00 0.00 3.27
3257 3714 0.040958 GAACTGCTGCGTTTGGTGAG 60.041 55.000 10.27 0.00 0.00 3.51
3258 3715 1.771073 CGAACTGCTGCGTTTGGTGA 61.771 55.000 13.32 0.00 0.00 4.02
3259 3716 1.369209 CGAACTGCTGCGTTTGGTG 60.369 57.895 13.32 3.00 0.00 4.17
3260 3717 2.542907 CCGAACTGCTGCGTTTGGT 61.543 57.895 23.63 4.35 41.54 3.67
3261 3718 1.577328 ATCCGAACTGCTGCGTTTGG 61.577 55.000 24.91 24.91 45.80 3.28
3262 3719 1.075542 TATCCGAACTGCTGCGTTTG 58.924 50.000 13.87 13.87 0.00 2.93
3263 3720 1.665679 CATATCCGAACTGCTGCGTTT 59.334 47.619 10.27 0.00 0.00 3.60
3264 3721 1.290203 CATATCCGAACTGCTGCGTT 58.710 50.000 9.05 9.05 0.00 4.84
3265 3722 0.530650 CCATATCCGAACTGCTGCGT 60.531 55.000 0.00 0.00 0.00 5.24
3266 3723 1.835483 GCCATATCCGAACTGCTGCG 61.835 60.000 0.00 0.00 0.00 5.18
3267 3724 0.533755 AGCCATATCCGAACTGCTGC 60.534 55.000 0.00 0.00 0.00 5.25
3268 3725 1.069823 AGAGCCATATCCGAACTGCTG 59.930 52.381 0.00 0.00 0.00 4.41
3269 3726 1.342819 GAGAGCCATATCCGAACTGCT 59.657 52.381 0.00 0.00 0.00 4.24
3270 3727 1.069204 TGAGAGCCATATCCGAACTGC 59.931 52.381 0.00 0.00 0.00 4.40
3271 3728 2.865670 GCTGAGAGCCATATCCGAACTG 60.866 54.545 0.00 0.00 34.48 3.16
3272 3729 1.342819 GCTGAGAGCCATATCCGAACT 59.657 52.381 0.00 0.00 34.48 3.01
3273 3730 1.069204 TGCTGAGAGCCATATCCGAAC 59.931 52.381 0.00 0.00 41.51 3.95
3274 3731 1.413118 TGCTGAGAGCCATATCCGAA 58.587 50.000 0.00 0.00 41.51 4.30
3275 3732 1.342496 CTTGCTGAGAGCCATATCCGA 59.658 52.381 0.00 0.00 41.51 4.55
3317 3804 2.039405 GGCTGCTGCTCTTGGTGAG 61.039 63.158 15.64 0.00 45.33 3.51
3318 3805 2.033141 GGCTGCTGCTCTTGGTGA 59.967 61.111 15.64 0.00 39.59 4.02
3319 3806 3.060615 GGGCTGCTGCTCTTGGTG 61.061 66.667 15.64 0.00 36.57 4.17
3320 3807 3.564345 CTGGGCTGCTGCTCTTGGT 62.564 63.158 17.02 0.00 41.13 3.67
3321 3808 2.750637 CTGGGCTGCTGCTCTTGG 60.751 66.667 17.02 3.41 41.13 3.61
3322 3809 2.189191 TACCTGGGCTGCTGCTCTTG 62.189 60.000 17.02 9.79 41.13 3.02
3323 3810 1.277580 ATACCTGGGCTGCTGCTCTT 61.278 55.000 17.02 3.72 41.13 2.85
3324 3811 1.692042 ATACCTGGGCTGCTGCTCT 60.692 57.895 17.02 0.00 41.13 4.09
3325 3812 1.525535 CATACCTGGGCTGCTGCTC 60.526 63.158 15.64 12.43 40.87 4.26
3326 3813 2.593978 CATACCTGGGCTGCTGCT 59.406 61.111 15.64 0.00 39.59 4.24
3327 3814 2.517875 CCATACCTGGGCTGCTGC 60.518 66.667 7.10 7.10 39.04 5.25
3334 3821 1.340399 TGCTGAGAGCCATACCTGGG 61.340 60.000 0.00 0.00 43.36 4.45
3335 3822 0.543277 TTGCTGAGAGCCATACCTGG 59.457 55.000 0.00 0.00 46.17 4.45
3336 3823 1.474677 CCTTGCTGAGAGCCATACCTG 60.475 57.143 0.00 0.00 41.51 4.00
3337 3824 0.835941 CCTTGCTGAGAGCCATACCT 59.164 55.000 0.00 0.00 41.51 3.08
3338 3825 0.543749 ACCTTGCTGAGAGCCATACC 59.456 55.000 0.00 0.00 41.51 2.73
3339 3826 1.208052 TGACCTTGCTGAGAGCCATAC 59.792 52.381 0.00 0.00 41.51 2.39
3340 3827 1.571955 TGACCTTGCTGAGAGCCATA 58.428 50.000 0.00 0.00 41.51 2.74
3341 3828 0.694771 TTGACCTTGCTGAGAGCCAT 59.305 50.000 0.00 0.00 41.51 4.40
3342 3829 0.250467 GTTGACCTTGCTGAGAGCCA 60.250 55.000 0.00 0.00 41.51 4.75
3343 3830 0.250467 TGTTGACCTTGCTGAGAGCC 60.250 55.000 0.00 0.00 41.51 4.70
3344 3831 1.155042 CTGTTGACCTTGCTGAGAGC 58.845 55.000 0.00 0.00 42.82 4.09
3345 3832 1.155042 GCTGTTGACCTTGCTGAGAG 58.845 55.000 0.00 0.00 0.00 3.20
3346 3833 0.250467 GGCTGTTGACCTTGCTGAGA 60.250 55.000 0.00 0.00 0.00 3.27
3605 4185 1.450312 GCTTGGTGAGCGCCATACT 60.450 57.895 2.29 0.00 42.46 2.12
3756 4336 2.280797 GTCCGAGCACTGCCAACA 60.281 61.111 0.00 0.00 0.00 3.33
3757 4337 2.029844 GAGTCCGAGCACTGCCAAC 61.030 63.158 0.00 0.00 0.00 3.77
3782 4362 6.182627 TGCTGATTTCCTATATTGCCATAGG 58.817 40.000 8.98 8.98 46.22 2.57
3790 4370 9.584008 AAACTGATCATGCTGATTTCCTATATT 57.416 29.630 0.00 0.00 37.20 1.28
3834 4414 3.278574 CTGAGTGTCAACCTTTTGTCCA 58.721 45.455 0.00 0.00 34.02 4.02
3942 4522 3.065786 CCGATCCAAACTGATCATGTTGG 59.934 47.826 22.88 22.88 41.00 3.77
4021 4601 3.181503 GCATACTTGACAGCCACTTCATG 60.182 47.826 0.00 0.00 0.00 3.07
4075 4655 6.880529 CCTCAAATTAGGCCATGTTTGATTTT 59.119 34.615 21.85 2.02 39.15 1.82
4195 4775 5.353394 TCATCATTGGGGTCTACAAGTAC 57.647 43.478 0.00 0.00 0.00 2.73
4258 4840 4.082787 CCTTGCTCCAAACAAATACGACAT 60.083 41.667 0.00 0.00 0.00 3.06
4265 4847 2.531522 GCACCTTGCTCCAAACAAAT 57.468 45.000 0.00 0.00 40.96 2.32
4324 4906 2.158755 CCCATTTGATCGCCTAACTCCT 60.159 50.000 0.00 0.00 0.00 3.69
4372 4954 6.014669 AGCCAAATGTAACTGAGGCAAATAAA 60.015 34.615 0.00 0.00 44.34 1.40
4521 5103 7.782897 TTACATTTCCATAAACCATTCCACA 57.217 32.000 0.00 0.00 0.00 4.17
4528 5110 8.865090 AGTTGTTCATTACATTTCCATAAACCA 58.135 29.630 0.00 0.00 36.44 3.67
4629 5211 9.900710 CAGTTAGTACAGCAGGATAATTAGTAG 57.099 37.037 0.00 0.00 0.00 2.57
4671 5253 3.533606 ATCAATCAGGACGGACTTCAG 57.466 47.619 0.00 0.00 0.00 3.02
4679 5261 5.063944 CCAGACTTGTTTATCAATCAGGACG 59.936 44.000 0.00 0.00 35.35 4.79
4690 5272 5.831103 ACCATCCAATCCAGACTTGTTTAT 58.169 37.500 0.00 0.00 0.00 1.40
4693 5275 3.814504 ACCATCCAATCCAGACTTGTT 57.185 42.857 0.00 0.00 0.00 2.83
4773 5361 3.325135 GGAAGGGTATGTGTAGCAGCTAT 59.675 47.826 5.14 0.00 0.00 2.97
4789 5377 6.986231 GCCAATTATTATCAAAGTTGGAAGGG 59.014 38.462 6.16 0.00 38.65 3.95
4914 5502 5.593502 AGGACAGGGAGATTAGTTTACTACG 59.406 44.000 0.00 0.00 0.00 3.51
4946 5534 5.125578 ACCATCATCATCATCTATGCATTGC 59.874 40.000 3.54 0.46 35.38 3.56
4947 5535 6.374333 TCACCATCATCATCATCTATGCATTG 59.626 38.462 3.54 2.26 35.38 2.82
4948 5536 6.481643 TCACCATCATCATCATCTATGCATT 58.518 36.000 3.54 0.00 35.38 3.56
4950 5538 5.492855 TCACCATCATCATCATCTATGCA 57.507 39.130 0.00 0.00 35.38 3.96
4951 5539 7.388224 GGATATCACCATCATCATCATCTATGC 59.612 40.741 4.83 0.00 35.38 3.14
4952 5540 8.429641 TGGATATCACCATCATCATCATCTATG 58.570 37.037 4.83 0.00 34.77 2.23
4953 5541 8.562949 TGGATATCACCATCATCATCATCTAT 57.437 34.615 4.83 0.00 34.77 1.98
4954 5542 7.983166 TGGATATCACCATCATCATCATCTA 57.017 36.000 4.83 0.00 34.77 1.98
4955 5543 6.886178 TGGATATCACCATCATCATCATCT 57.114 37.500 4.83 0.00 34.77 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.