Multiple sequence alignment - TraesCS2B01G551700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G551700 chr2B 100.000 2339 0 0 1 2339 747822507 747820169 0.000000e+00 4320.0
1 TraesCS2B01G551700 chr2B 86.333 600 68 11 846 1441 747855385 747854796 1.960000e-180 641.0
2 TraesCS2B01G551700 chr2B 79.446 939 110 37 677 1577 747574526 747573633 2.590000e-164 588.0
3 TraesCS2B01G551700 chr2B 88.449 303 27 8 1577 1875 640505874 640506172 2.210000e-95 359.0
4 TraesCS2B01G551700 chr2B 83.045 289 36 9 510 786 747603768 747603481 1.390000e-62 250.0
5 TraesCS2B01G551700 chr2B 88.095 168 13 3 484 650 747608272 747608111 2.370000e-45 193.0
6 TraesCS2B01G551700 chr2B 94.215 121 7 0 3 123 534638922 534638802 3.970000e-43 185.0
7 TraesCS2B01G551700 chr2B 84.277 159 12 9 1429 1576 747854773 747854617 2.420000e-30 143.0
8 TraesCS2B01G551700 chr2B 79.781 183 23 6 510 679 747575166 747574985 1.140000e-23 121.0
9 TraesCS2B01G551700 chr2B 82.609 138 16 6 1572 1704 697046471 697046605 5.280000e-22 115.0
10 TraesCS2B01G551700 chr2D 85.585 1325 83 34 311 1577 612456085 612454811 0.000000e+00 1290.0
11 TraesCS2B01G551700 chr2D 84.585 1025 92 33 596 1577 612935870 612934869 0.000000e+00 957.0
12 TraesCS2B01G551700 chr2D 84.615 780 90 13 860 1613 609639088 609639863 0.000000e+00 749.0
13 TraesCS2B01G551700 chr2D 85.335 716 71 13 888 1577 612697221 612696514 0.000000e+00 710.0
14 TraesCS2B01G551700 chr2D 84.459 740 77 17 837 1562 612982965 612982250 0.000000e+00 695.0
15 TraesCS2B01G551700 chr2D 85.605 653 77 8 936 1577 612760008 612759362 0.000000e+00 669.0
16 TraesCS2B01G551700 chr2D 87.129 303 27 9 1577 1875 537719579 537719873 1.340000e-87 333.0
17 TraesCS2B01G551700 chr2D 79.934 304 50 10 1961 2257 607662166 607661867 1.820000e-51 213.0
18 TraesCS2B01G551700 chr2D 88.690 168 11 5 1369 1532 609635109 609635272 5.100000e-47 198.0
19 TraesCS2B01G551700 chr2D 89.381 113 9 3 484 594 612794828 612794717 3.130000e-29 139.0
20 TraesCS2B01G551700 chr2D 77.917 240 29 11 1961 2198 553911224 553911441 6.780000e-26 128.0
21 TraesCS2B01G551700 chr2A 81.114 1149 109 44 473 1577 744616725 744615641 0.000000e+00 821.0
22 TraesCS2B01G551700 chr2A 86.144 765 75 16 837 1577 744635765 744635008 0.000000e+00 797.0
23 TraesCS2B01G551700 chr2A 85.492 772 77 15 876 1616 742306522 742305755 0.000000e+00 773.0
24 TraesCS2B01G551700 chr2A 84.716 229 21 10 1360 1576 744624982 744624756 1.410000e-52 217.0
25 TraesCS2B01G551700 chr2A 82.946 258 18 8 215 462 744625545 744625304 2.360000e-50 209.0
26 TraesCS2B01G551700 chr2A 94.309 123 6 1 473 594 744625260 744625138 1.100000e-43 187.0
27 TraesCS2B01G551700 chr2A 92.857 112 7 1 484 594 744628664 744628553 6.690000e-36 161.0
28 TraesCS2B01G551700 chr2A 84.375 64 1 1 767 830 744625062 744625008 1.000000e-03 54.7
29 TraesCS2B01G551700 chr3D 89.095 431 39 7 1902 2328 108900340 108899914 1.590000e-146 529.0
30 TraesCS2B01G551700 chr3A 85.009 527 49 20 1811 2330 585576883 585576380 2.070000e-140 508.0
31 TraesCS2B01G551700 chr3A 83.475 472 40 13 1567 2032 585601449 585601010 2.800000e-109 405.0
32 TraesCS2B01G551700 chr3A 87.291 299 35 2 1577 1875 94855487 94855782 2.880000e-89 339.0
33 TraesCS2B01G551700 chr3B 81.616 359 58 7 1961 2316 586204843 586204490 8.180000e-75 291.0
34 TraesCS2B01G551700 chr3B 94.355 124 7 0 4 127 670165582 670165459 8.530000e-45 191.0
35 TraesCS2B01G551700 chr3B 92.683 123 9 0 3 125 90169338 90169460 6.640000e-41 178.0
36 TraesCS2B01G551700 chr4A 83.165 297 40 9 1961 2254 620712311 620712600 1.780000e-66 263.0
37 TraesCS2B01G551700 chr4A 93.443 122 8 0 4 125 730816196 730816075 5.130000e-42 182.0
38 TraesCS2B01G551700 chr5D 85.388 219 27 3 2040 2258 426152441 426152654 3.030000e-54 222.0
39 TraesCS2B01G551700 chr5D 79.783 277 48 8 2044 2317 313144918 313144647 6.600000e-46 195.0
40 TraesCS2B01G551700 chr6B 88.108 185 17 4 2049 2230 331053521 331053703 5.060000e-52 215.0
41 TraesCS2B01G551700 chr6B 89.262 149 10 4 1899 2043 331053335 331053481 5.130000e-42 182.0
42 TraesCS2B01G551700 chr6B 92.742 124 9 0 4 127 542561293 542561416 1.850000e-41 180.0
43 TraesCS2B01G551700 chr6B 92.683 123 9 0 3 125 356337311 356337189 6.640000e-41 178.0
44 TraesCS2B01G551700 chr1D 80.899 267 33 15 2067 2321 311929653 311929393 6.600000e-46 195.0
45 TraesCS2B01G551700 chr4B 93.388 121 8 0 3 123 626775323 626775443 1.850000e-41 180.0
46 TraesCS2B01G551700 chr4B 91.935 124 10 0 3 126 125878482 125878359 8.590000e-40 174.0
47 TraesCS2B01G551700 chr7A 90.511 137 9 4 3 136 289158296 289158431 6.640000e-41 178.0
48 TraesCS2B01G551700 chr6D 81.026 195 23 8 1961 2151 161250136 161250320 2.420000e-30 143.0
49 TraesCS2B01G551700 chr1A 84.962 133 16 2 1576 1704 7314623 7314491 5.240000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G551700 chr2B 747820169 747822507 2338 True 4320.0 4320 100.0000 1 2339 1 chr2B.!!$R4 2338
1 TraesCS2B01G551700 chr2B 747854617 747855385 768 True 392.0 641 85.3050 846 1576 2 chr2B.!!$R6 730
2 TraesCS2B01G551700 chr2B 747573633 747575166 1533 True 354.5 588 79.6135 510 1577 2 chr2B.!!$R5 1067
3 TraesCS2B01G551700 chr2D 612454811 612456085 1274 True 1290.0 1290 85.5850 311 1577 1 chr2D.!!$R2 1266
4 TraesCS2B01G551700 chr2D 612934869 612935870 1001 True 957.0 957 84.5850 596 1577 1 chr2D.!!$R6 981
5 TraesCS2B01G551700 chr2D 612696514 612697221 707 True 710.0 710 85.3350 888 1577 1 chr2D.!!$R3 689
6 TraesCS2B01G551700 chr2D 612982250 612982965 715 True 695.0 695 84.4590 837 1562 1 chr2D.!!$R7 725
7 TraesCS2B01G551700 chr2D 612759362 612760008 646 True 669.0 669 85.6050 936 1577 1 chr2D.!!$R4 641
8 TraesCS2B01G551700 chr2D 609635109 609639863 4754 False 473.5 749 86.6525 860 1613 2 chr2D.!!$F3 753
9 TraesCS2B01G551700 chr2A 744615641 744616725 1084 True 821.0 821 81.1140 473 1577 1 chr2A.!!$R2 1104
10 TraesCS2B01G551700 chr2A 744635008 744635765 757 True 797.0 797 86.1440 837 1577 1 chr2A.!!$R3 740
11 TraesCS2B01G551700 chr2A 742305755 742306522 767 True 773.0 773 85.4920 876 1616 1 chr2A.!!$R1 740
12 TraesCS2B01G551700 chr3A 585576380 585576883 503 True 508.0 508 85.0090 1811 2330 1 chr3A.!!$R1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.026285 CCGACATTCGCGAAACCATC 59.974 55.0 27.23 18.18 38.82 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1622 4875 0.028902 TGTCGTCGAGTGTGTGTGAG 59.971 55.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 8.873144 TGTTACCACCTTTCATTAACTACTAGT 58.127 33.333 0.00 0.00 0.00 2.57
56 57 9.363763 GTTACCACCTTTCATTAACTACTAGTC 57.636 37.037 0.00 0.00 0.00 2.59
57 58 7.549147 ACCACCTTTCATTAACTACTAGTCA 57.451 36.000 0.00 0.00 0.00 3.41
58 59 8.147244 ACCACCTTTCATTAACTACTAGTCAT 57.853 34.615 0.00 0.00 0.00 3.06
59 60 8.041323 ACCACCTTTCATTAACTACTAGTCATG 58.959 37.037 0.00 0.00 0.00 3.07
73 74 8.989980 ACTACTAGTCATGTAAGCAAAGTTTTC 58.010 33.333 0.00 0.00 0.00 2.29
76 77 9.555727 ACTAGTCATGTAAGCAAAGTTTTCTTA 57.444 29.630 3.91 3.91 39.48 2.10
82 83 9.584839 CATGTAAGCAAAGTTTTCTTAAAATGC 57.415 29.630 8.95 0.00 39.48 3.56
84 85 5.328886 AGCAAAGTTTTCTTAAAATGCGC 57.671 34.783 0.00 0.00 41.80 6.09
85 86 5.049828 AGCAAAGTTTTCTTAAAATGCGCT 58.950 33.333 9.73 0.00 41.80 5.92
86 87 6.212955 AGCAAAGTTTTCTTAAAATGCGCTA 58.787 32.000 9.73 0.00 41.80 4.26
87 88 6.143919 AGCAAAGTTTTCTTAAAATGCGCTAC 59.856 34.615 9.73 0.00 41.80 3.58
88 89 6.074569 GCAAAGTTTTCTTAAAATGCGCTACA 60.075 34.615 9.73 0.00 39.48 2.74
89 90 7.359181 GCAAAGTTTTCTTAAAATGCGCTACAT 60.359 33.333 9.73 0.00 38.98 2.29
90 91 8.487176 CAAAGTTTTCTTAAAATGCGCTACATT 58.513 29.630 9.73 0.00 44.29 2.71
91 92 9.685828 AAAGTTTTCTTAAAATGCGCTACATTA 57.314 25.926 9.73 0.00 42.83 1.90
92 93 9.124807 AAGTTTTCTTAAAATGCGCTACATTAC 57.875 29.630 9.73 0.00 42.29 1.89
104 105 6.498304 TGCGCTACATTACTACCTAAGTTAC 58.502 40.000 9.73 0.00 39.80 2.50
105 106 6.319658 TGCGCTACATTACTACCTAAGTTACT 59.680 38.462 9.73 0.00 39.80 2.24
106 107 6.855403 GCGCTACATTACTACCTAAGTTACTC 59.145 42.308 0.00 0.00 39.80 2.59
107 108 7.358830 CGCTACATTACTACCTAAGTTACTCC 58.641 42.308 0.00 0.00 39.80 3.85
108 109 7.521261 CGCTACATTACTACCTAAGTTACTCCC 60.521 44.444 0.00 0.00 39.80 4.30
109 110 7.286316 GCTACATTACTACCTAAGTTACTCCCA 59.714 40.741 0.00 0.00 39.80 4.37
110 111 7.415592 ACATTACTACCTAAGTTACTCCCAC 57.584 40.000 0.00 0.00 39.80 4.61
111 112 7.187676 ACATTACTACCTAAGTTACTCCCACT 58.812 38.462 0.00 0.00 39.80 4.00
112 113 8.339247 ACATTACTACCTAAGTTACTCCCACTA 58.661 37.037 0.00 0.00 39.80 2.74
113 114 9.364653 CATTACTACCTAAGTTACTCCCACTAT 57.635 37.037 0.00 0.00 39.80 2.12
114 115 8.757982 TTACTACCTAAGTTACTCCCACTATG 57.242 38.462 0.00 0.00 39.80 2.23
116 117 6.832900 ACTACCTAAGTTACTCCCACTATGAC 59.167 42.308 0.00 0.00 33.35 3.06
117 118 5.840081 ACCTAAGTTACTCCCACTATGACT 58.160 41.667 0.00 0.00 0.00 3.41
118 119 6.978261 ACCTAAGTTACTCCCACTATGACTA 58.022 40.000 0.00 0.00 0.00 2.59
120 121 5.855740 AAGTTACTCCCACTATGACTAGC 57.144 43.478 0.00 0.00 0.00 3.42
121 122 4.216708 AGTTACTCCCACTATGACTAGCC 58.783 47.826 0.00 0.00 0.00 3.93
122 123 4.079096 AGTTACTCCCACTATGACTAGCCT 60.079 45.833 0.00 0.00 0.00 4.58
123 124 5.133999 AGTTACTCCCACTATGACTAGCCTA 59.866 44.000 0.00 0.00 0.00 3.93
124 125 4.537945 ACTCCCACTATGACTAGCCTAA 57.462 45.455 0.00 0.00 0.00 2.69
125 126 5.081315 ACTCCCACTATGACTAGCCTAAT 57.919 43.478 0.00 0.00 0.00 1.73
126 127 4.835615 ACTCCCACTATGACTAGCCTAATG 59.164 45.833 0.00 0.00 0.00 1.90
129 130 4.019860 CCCACTATGACTAGCCTAATGCAT 60.020 45.833 0.00 0.00 44.83 3.96
131 132 5.641209 CCACTATGACTAGCCTAATGCATTC 59.359 44.000 16.86 1.35 44.83 2.67
132 133 6.462500 CACTATGACTAGCCTAATGCATTCT 58.538 40.000 16.86 9.75 44.83 2.40
133 134 6.589523 CACTATGACTAGCCTAATGCATTCTC 59.410 42.308 16.86 6.31 44.83 2.87
134 135 4.342862 TGACTAGCCTAATGCATTCTCC 57.657 45.455 16.86 5.15 44.83 3.71
135 136 3.243873 TGACTAGCCTAATGCATTCTCCG 60.244 47.826 16.86 2.99 44.83 4.63
136 137 2.037772 ACTAGCCTAATGCATTCTCCGG 59.962 50.000 16.86 13.05 44.83 5.14
137 138 0.536006 AGCCTAATGCATTCTCCGGC 60.536 55.000 23.56 23.56 44.83 6.13
138 139 1.518903 GCCTAATGCATTCTCCGGCC 61.519 60.000 16.86 0.00 40.77 6.13
140 141 1.517242 CTAATGCATTCTCCGGCCTC 58.483 55.000 16.86 0.00 0.00 4.70
142 143 0.179034 AATGCATTCTCCGGCCTCTC 60.179 55.000 5.99 0.00 0.00 3.20
143 144 1.053264 ATGCATTCTCCGGCCTCTCT 61.053 55.000 0.00 0.00 0.00 3.10
144 145 1.068921 GCATTCTCCGGCCTCTCTC 59.931 63.158 0.00 0.00 0.00 3.20
145 146 1.361993 CATTCTCCGGCCTCTCTCG 59.638 63.158 0.00 0.00 0.00 4.04
146 147 1.103987 CATTCTCCGGCCTCTCTCGA 61.104 60.000 0.00 0.00 0.00 4.04
147 148 0.178975 ATTCTCCGGCCTCTCTCGAT 60.179 55.000 0.00 0.00 0.00 3.59
149 150 0.820074 TCTCCGGCCTCTCTCGATTC 60.820 60.000 0.00 0.00 0.00 2.52
150 151 0.821711 CTCCGGCCTCTCTCGATTCT 60.822 60.000 0.00 0.00 0.00 2.40
151 152 0.395862 TCCGGCCTCTCTCGATTCTT 60.396 55.000 0.00 0.00 0.00 2.52
152 153 0.461961 CCGGCCTCTCTCGATTCTTT 59.538 55.000 0.00 0.00 0.00 2.52
153 154 1.537135 CCGGCCTCTCTCGATTCTTTC 60.537 57.143 0.00 0.00 0.00 2.62
155 156 2.542824 CGGCCTCTCTCGATTCTTTCTC 60.543 54.545 0.00 0.00 0.00 2.87
156 157 2.223947 GGCCTCTCTCGATTCTTTCTCC 60.224 54.545 0.00 0.00 0.00 3.71
157 158 2.542824 GCCTCTCTCGATTCTTTCTCCG 60.543 54.545 0.00 0.00 0.00 4.63
158 159 2.685897 CCTCTCTCGATTCTTTCTCCGT 59.314 50.000 0.00 0.00 0.00 4.69
159 160 3.488384 CCTCTCTCGATTCTTTCTCCGTG 60.488 52.174 0.00 0.00 0.00 4.94
160 161 2.159366 TCTCTCGATTCTTTCTCCGTGC 60.159 50.000 0.00 0.00 0.00 5.34
161 162 0.917259 CTCGATTCTTTCTCCGTGCG 59.083 55.000 0.00 0.00 0.00 5.34
162 163 0.242825 TCGATTCTTTCTCCGTGCGT 59.757 50.000 0.00 0.00 0.00 5.24
163 164 0.366871 CGATTCTTTCTCCGTGCGTG 59.633 55.000 0.00 0.00 0.00 5.34
164 165 1.710013 GATTCTTTCTCCGTGCGTGA 58.290 50.000 0.00 0.00 0.00 4.35
165 166 1.390463 GATTCTTTCTCCGTGCGTGAC 59.610 52.381 0.00 0.00 0.00 3.67
166 167 0.103390 TTCTTTCTCCGTGCGTGACA 59.897 50.000 0.00 0.00 0.00 3.58
167 168 0.596600 TCTTTCTCCGTGCGTGACAC 60.597 55.000 0.00 0.00 46.45 3.67
174 175 2.928361 GTGCGTGACACGGAACTG 59.072 61.111 27.86 0.78 45.07 3.16
175 176 2.964925 TGCGTGACACGGAACTGC 60.965 61.111 27.86 11.55 39.47 4.40
176 177 4.059459 GCGTGACACGGAACTGCG 62.059 66.667 27.86 1.73 42.82 5.18
177 178 2.657296 CGTGACACGGAACTGCGT 60.657 61.111 20.26 0.00 38.08 5.24
178 179 2.235016 CGTGACACGGAACTGCGTT 61.235 57.895 20.26 0.00 38.08 4.84
180 181 1.142097 TGACACGGAACTGCGTTCA 59.858 52.632 18.49 3.02 43.54 3.18
181 182 0.460459 TGACACGGAACTGCGTTCAA 60.460 50.000 18.49 0.61 43.54 2.69
182 183 0.042448 GACACGGAACTGCGTTCAAC 60.042 55.000 18.49 5.96 43.54 3.18
183 184 1.083657 CACGGAACTGCGTTCAACG 60.084 57.895 5.28 5.28 43.54 4.10
185 186 2.251371 GGAACTGCGTTCAACGGC 59.749 61.111 12.81 4.73 43.54 5.68
187 188 1.204312 GAACTGCGTTCAACGGCTC 59.796 57.895 12.81 0.00 42.82 4.70
188 189 1.495584 GAACTGCGTTCAACGGCTCA 61.496 55.000 12.81 0.00 42.82 4.26
189 190 1.092921 AACTGCGTTCAACGGCTCAA 61.093 50.000 12.81 0.00 42.82 3.02
190 191 0.884704 ACTGCGTTCAACGGCTCAAT 60.885 50.000 12.81 0.00 42.82 2.57
191 192 0.179215 CTGCGTTCAACGGCTCAATC 60.179 55.000 12.81 0.00 42.82 2.67
192 193 1.225745 GCGTTCAACGGCTCAATCG 60.226 57.895 12.81 0.00 42.82 3.34
193 194 1.225745 CGTTCAACGGCTCAATCGC 60.226 57.895 0.61 0.00 38.08 4.58
194 195 1.225745 GTTCAACGGCTCAATCGCG 60.226 57.895 0.00 0.00 0.00 5.87
195 196 1.373622 TTCAACGGCTCAATCGCGA 60.374 52.632 13.09 13.09 0.00 5.87
196 197 1.351430 TTCAACGGCTCAATCGCGAG 61.351 55.000 16.66 1.05 36.02 5.03
197 198 2.509336 AACGGCTCAATCGCGAGG 60.509 61.111 16.66 9.80 33.36 4.63
198 199 3.001902 AACGGCTCAATCGCGAGGA 62.002 57.895 16.66 13.94 33.36 3.71
199 200 2.956964 CGGCTCAATCGCGAGGAC 60.957 66.667 16.66 5.94 33.36 3.85
200 201 2.586357 GGCTCAATCGCGAGGACC 60.586 66.667 16.66 14.03 33.36 4.46
202 203 1.590259 GCTCAATCGCGAGGACCTC 60.590 63.158 16.66 11.87 33.36 3.85
203 204 1.066587 CTCAATCGCGAGGACCTCC 59.933 63.158 16.66 7.81 0.00 4.30
204 205 2.278857 CAATCGCGAGGACCTCCG 60.279 66.667 16.66 18.56 42.08 4.63
205 206 2.754658 AATCGCGAGGACCTCCGT 60.755 61.111 23.30 13.25 42.08 4.69
207 208 1.885163 AATCGCGAGGACCTCCGTTT 61.885 55.000 23.30 19.81 42.08 3.60
209 210 2.092882 CGCGAGGACCTCCGTTTTC 61.093 63.158 16.13 0.00 42.08 2.29
210 211 1.005394 GCGAGGACCTCCGTTTTCA 60.005 57.895 16.13 0.00 42.08 2.69
211 212 0.601841 GCGAGGACCTCCGTTTTCAA 60.602 55.000 16.13 0.00 42.08 2.69
213 214 2.675889 GCGAGGACCTCCGTTTTCAATA 60.676 50.000 16.13 0.00 42.08 1.90
214 215 3.187700 CGAGGACCTCCGTTTTCAATAG 58.812 50.000 16.13 0.00 42.08 1.73
215 216 3.532542 GAGGACCTCCGTTTTCAATAGG 58.467 50.000 10.74 0.00 42.08 2.57
216 217 2.014857 GGACCTCCGTTTTCAATAGGC 58.985 52.381 0.00 0.00 0.00 3.93
217 218 2.014857 GACCTCCGTTTTCAATAGGCC 58.985 52.381 0.00 0.00 0.00 5.19
219 220 1.743394 CCTCCGTTTTCAATAGGCCAC 59.257 52.381 5.01 0.00 0.00 5.01
220 221 1.396996 CTCCGTTTTCAATAGGCCACG 59.603 52.381 5.01 2.74 0.00 4.94
221 222 0.450184 CCGTTTTCAATAGGCCACGG 59.550 55.000 12.00 12.00 41.08 4.94
222 223 0.179174 CGTTTTCAATAGGCCACGGC 60.179 55.000 5.01 0.00 41.06 5.68
224 225 1.135402 GTTTTCAATAGGCCACGGCTG 60.135 52.381 5.01 0.00 39.30 4.85
225 226 1.312371 TTTCAATAGGCCACGGCTGC 61.312 55.000 5.01 0.00 39.30 5.25
226 227 3.576356 CAATAGGCCACGGCTGCG 61.576 66.667 5.01 0.00 39.30 5.18
227 228 4.096003 AATAGGCCACGGCTGCGT 62.096 61.111 5.01 0.00 39.30 5.24
228 229 4.530857 ATAGGCCACGGCTGCGTC 62.531 66.667 5.01 0.00 39.30 5.19
233 234 4.680237 CCACGGCTGCGTCCTTGA 62.680 66.667 0.00 0.00 0.00 3.02
234 235 3.414700 CACGGCTGCGTCCTTGAC 61.415 66.667 0.00 0.00 0.00 3.18
235 236 4.681978 ACGGCTGCGTCCTTGACC 62.682 66.667 0.00 0.00 0.00 4.02
236 237 4.379243 CGGCTGCGTCCTTGACCT 62.379 66.667 0.00 0.00 0.00 3.85
238 239 2.435059 GCTGCGTCCTTGACCTCC 60.435 66.667 0.00 0.00 0.00 4.30
239 240 3.059982 CTGCGTCCTTGACCTCCA 58.940 61.111 0.00 0.00 0.00 3.86
240 241 1.374758 CTGCGTCCTTGACCTCCAC 60.375 63.158 0.00 0.00 0.00 4.02
241 242 2.047179 GCGTCCTTGACCTCCACC 60.047 66.667 0.00 0.00 0.00 4.61
243 244 2.047179 GTCCTTGACCTCCACCGC 60.047 66.667 0.00 0.00 0.00 5.68
245 246 4.410400 CCTTGACCTCCACCGCCC 62.410 72.222 0.00 0.00 0.00 6.13
246 247 4.760047 CTTGACCTCCACCGCCCG 62.760 72.222 0.00 0.00 0.00 6.13
270 271 2.673114 GCCGACATTCGCGAAACCA 61.673 57.895 27.23 2.34 38.82 3.67
272 273 0.026285 CCGACATTCGCGAAACCATC 59.974 55.000 27.23 18.18 38.82 3.51
273 274 0.026285 CGACATTCGCGAAACCATCC 59.974 55.000 27.23 10.73 31.14 3.51
274 275 0.377203 GACATTCGCGAAACCATCCC 59.623 55.000 27.23 7.25 0.00 3.85
275 276 0.322098 ACATTCGCGAAACCATCCCA 60.322 50.000 27.23 0.00 0.00 4.37
276 277 1.024271 CATTCGCGAAACCATCCCAT 58.976 50.000 27.23 2.32 0.00 4.00
277 278 1.002468 CATTCGCGAAACCATCCCATC 60.002 52.381 27.23 0.00 0.00 3.51
278 279 0.746563 TTCGCGAAACCATCCCATCC 60.747 55.000 21.14 0.00 0.00 3.51
279 280 2.186826 CGCGAAACCATCCCATCCC 61.187 63.158 0.00 0.00 0.00 3.85
280 281 2.186826 GCGAAACCATCCCATCCCG 61.187 63.158 0.00 0.00 0.00 5.14
281 282 2.186826 CGAAACCATCCCATCCCGC 61.187 63.158 0.00 0.00 0.00 6.13
282 283 1.828224 GAAACCATCCCATCCCGCC 60.828 63.158 0.00 0.00 0.00 6.13
283 284 3.373932 AAACCATCCCATCCCGCCC 62.374 63.158 0.00 0.00 0.00 6.13
285 286 4.586235 CCATCCCATCCCGCCCAC 62.586 72.222 0.00 0.00 0.00 4.61
298 299 2.266055 CCCACGGCTCTGTTCTCC 59.734 66.667 0.00 0.00 0.00 3.71
299 300 2.286523 CCCACGGCTCTGTTCTCCT 61.287 63.158 0.00 0.00 0.00 3.69
300 301 1.079543 CCACGGCTCTGTTCTCCTG 60.080 63.158 0.00 0.00 0.00 3.86
302 303 2.125350 CGGCTCTGTTCTCCTGCC 60.125 66.667 0.00 0.00 40.14 4.85
304 305 1.220477 GGCTCTGTTCTCCTGCCTC 59.780 63.158 0.00 0.00 40.36 4.70
305 306 1.220477 GCTCTGTTCTCCTGCCTCC 59.780 63.158 0.00 0.00 0.00 4.30
306 307 1.264045 GCTCTGTTCTCCTGCCTCCT 61.264 60.000 0.00 0.00 0.00 3.69
307 308 0.536260 CTCTGTTCTCCTGCCTCCTG 59.464 60.000 0.00 0.00 0.00 3.86
308 309 0.906756 TCTGTTCTCCTGCCTCCTGG 60.907 60.000 0.00 0.00 0.00 4.45
309 310 0.906756 CTGTTCTCCTGCCTCCTGGA 60.907 60.000 0.00 0.00 37.50 3.86
310 311 0.473694 TGTTCTCCTGCCTCCTGGAA 60.474 55.000 0.00 0.00 38.44 3.53
311 312 0.035915 GTTCTCCTGCCTCCTGGAAC 60.036 60.000 0.00 0.00 38.44 3.62
313 314 3.003173 TCCTGCCTCCTGGAACCG 61.003 66.667 0.00 0.00 36.30 4.44
314 315 4.101448 CCTGCCTCCTGGAACCGG 62.101 72.222 0.00 0.00 34.57 5.28
315 316 3.322466 CTGCCTCCTGGAACCGGT 61.322 66.667 0.00 0.00 34.57 5.28
318 319 2.288025 GCCTCCTGGAACCGGTGTA 61.288 63.158 8.52 0.00 34.57 2.90
370 371 3.911698 AGCACGTCGAGCACCACA 61.912 61.111 16.93 0.00 0.00 4.17
391 392 3.532155 ATCCTCGACAGCTCCGGC 61.532 66.667 0.00 0.00 39.06 6.13
432 433 3.041940 CCCTCTTCACGCGCGTTT 61.042 61.111 35.90 10.72 0.00 3.60
433 434 2.170985 CCTCTTCACGCGCGTTTG 59.829 61.111 35.90 23.81 0.00 2.93
434 435 2.307309 CCTCTTCACGCGCGTTTGA 61.307 57.895 35.90 25.91 0.00 2.69
436 437 2.497628 CTTCACGCGCGTTTGAGC 60.498 61.111 35.90 0.00 37.58 4.26
437 438 2.943345 CTTCACGCGCGTTTGAGCT 61.943 57.895 35.90 6.91 38.95 4.09
438 439 2.802346 CTTCACGCGCGTTTGAGCTC 62.802 60.000 35.90 6.82 38.95 4.09
439 440 4.430423 CACGCGCGTTTGAGCTCC 62.430 66.667 35.90 0.00 38.95 4.70
469 470 0.038709 CGCTCCTAGCAGTATGAGCC 60.039 60.000 9.84 0.00 41.49 4.70
470 471 1.337118 GCTCCTAGCAGTATGAGCCT 58.663 55.000 5.40 0.00 39.68 4.58
471 472 1.691434 GCTCCTAGCAGTATGAGCCTT 59.309 52.381 5.40 0.00 39.68 4.35
494 495 0.320771 GACCACGGTGCACAAGAGAT 60.321 55.000 20.43 0.00 0.00 2.75
641 677 3.719268 TCCAGATCCAAGCTTTGCTAA 57.281 42.857 0.00 0.00 38.25 3.09
652 693 4.625607 AGCTTTGCTAAGGTAGTGAACT 57.374 40.909 10.90 0.00 40.17 3.01
662 703 5.662674 AAGGTAGTGAACTAGTGATGTCC 57.337 43.478 0.00 0.00 0.00 4.02
689 1191 4.201910 CGTTCATCCTTAATCACGCCATTT 60.202 41.667 0.00 0.00 0.00 2.32
704 1212 5.034152 ACGCCATTTTGCAGTATTTATTCG 58.966 37.500 0.00 0.00 0.00 3.34
720 1228 0.396435 TTCGCGGATAGATGGCCATT 59.604 50.000 21.84 12.36 0.00 3.16
721 1229 1.262417 TCGCGGATAGATGGCCATTA 58.738 50.000 21.84 14.18 0.00 1.90
722 1230 1.204704 TCGCGGATAGATGGCCATTAG 59.795 52.381 21.84 8.95 0.00 1.73
795 1312 3.342377 TTGATAGCCCACGTGATCAAA 57.658 42.857 21.43 10.12 35.82 2.69
799 1316 1.167851 AGCCCACGTGATCAAACATG 58.832 50.000 19.30 0.00 0.00 3.21
835 1356 2.412870 CCACGTGATCAAGCACAGTAA 58.587 47.619 19.30 0.00 38.69 2.24
874 3994 0.253327 CTCCAGCTAGGACCCCAAAC 59.747 60.000 1.25 0.00 43.07 2.93
925 4061 3.600388 CGGCAGACCTCTACAAGAAAAT 58.400 45.455 0.00 0.00 0.00 1.82
934 4070 4.154195 CCTCTACAAGAAAATCAACCCACG 59.846 45.833 0.00 0.00 0.00 4.94
983 4131 4.458397 TCGACCTTCGACCAACTATATCT 58.542 43.478 0.00 0.00 44.82 1.98
984 4132 4.885907 TCGACCTTCGACCAACTATATCTT 59.114 41.667 0.00 0.00 44.82 2.40
1080 4228 2.045926 GTCGCTGTGGCCCAGAAT 60.046 61.111 21.37 0.00 44.49 2.40
1207 4366 1.956477 GGACTACTTCGGCGGGTAATA 59.044 52.381 7.21 0.00 0.00 0.98
1208 4367 2.287849 GGACTACTTCGGCGGGTAATAC 60.288 54.545 7.21 0.00 0.00 1.89
1230 4392 0.839946 AGGTTCAAGTGGACTGCTGT 59.160 50.000 0.00 0.00 0.00 4.40
1368 4577 1.404717 CGTGCATGCAAGACCTCTAGT 60.405 52.381 26.87 0.00 0.00 2.57
1412 4621 1.537990 GCATGTTGGTTTCAAGCGGTT 60.538 47.619 0.00 0.00 32.92 4.44
1492 4734 9.136952 GTGTTATGTTTTTCTACGTATGAGAGT 57.863 33.333 0.00 0.00 0.00 3.24
1567 4820 6.890663 TTTCTTGCTTCATCTTGTTTTGTG 57.109 33.333 0.00 0.00 0.00 3.33
1589 4842 9.443323 TTGTGTGTATATTACTAGCAAACATGT 57.557 29.630 0.00 0.00 0.00 3.21
1590 4843 9.443323 TGTGTGTATATTACTAGCAAACATGTT 57.557 29.630 4.92 4.92 0.00 2.71
1618 4871 5.054390 GTTGCAACGGGAGAAAATAATCA 57.946 39.130 14.90 0.00 0.00 2.57
1619 4872 4.695217 TGCAACGGGAGAAAATAATCAC 57.305 40.909 0.00 0.00 0.00 3.06
1620 4873 3.442273 TGCAACGGGAGAAAATAATCACC 59.558 43.478 0.00 0.00 0.00 4.02
1621 4874 3.181490 GCAACGGGAGAAAATAATCACCC 60.181 47.826 0.00 0.00 44.25 4.61
1622 4875 3.292492 ACGGGAGAAAATAATCACCCC 57.708 47.619 4.53 0.00 44.70 4.95
1623 4876 2.850568 ACGGGAGAAAATAATCACCCCT 59.149 45.455 4.53 0.00 44.70 4.79
1624 4877 3.118000 ACGGGAGAAAATAATCACCCCTC 60.118 47.826 4.53 0.00 44.70 4.30
1625 4878 3.118038 CGGGAGAAAATAATCACCCCTCA 60.118 47.826 4.53 0.00 44.70 3.86
1626 4879 4.207955 GGGAGAAAATAATCACCCCTCAC 58.792 47.826 0.00 0.00 42.53 3.51
1627 4880 4.325030 GGGAGAAAATAATCACCCCTCACA 60.325 45.833 0.00 0.00 42.53 3.58
1628 4881 4.640647 GGAGAAAATAATCACCCCTCACAC 59.359 45.833 0.00 0.00 0.00 3.82
1629 4882 5.253330 GAGAAAATAATCACCCCTCACACA 58.747 41.667 0.00 0.00 0.00 3.72
1630 4883 5.010282 AGAAAATAATCACCCCTCACACAC 58.990 41.667 0.00 0.00 0.00 3.82
1631 4884 4.380843 AAATAATCACCCCTCACACACA 57.619 40.909 0.00 0.00 0.00 3.72
1632 4885 2.851263 TAATCACCCCTCACACACAC 57.149 50.000 0.00 0.00 0.00 3.82
1633 4886 1.140312 AATCACCCCTCACACACACT 58.860 50.000 0.00 0.00 0.00 3.55
1634 4887 0.687354 ATCACCCCTCACACACACTC 59.313 55.000 0.00 0.00 0.00 3.51
1635 4888 1.300931 CACCCCTCACACACACTCG 60.301 63.158 0.00 0.00 0.00 4.18
1636 4889 1.456892 ACCCCTCACACACACTCGA 60.457 57.895 0.00 0.00 0.00 4.04
1637 4890 1.006102 CCCCTCACACACACTCGAC 60.006 63.158 0.00 0.00 0.00 4.20
1638 4891 1.371758 CCCTCACACACACTCGACG 60.372 63.158 0.00 0.00 0.00 5.12
1639 4892 1.652563 CCTCACACACACTCGACGA 59.347 57.895 0.00 0.00 0.00 4.20
1640 4893 0.660595 CCTCACACACACTCGACGAC 60.661 60.000 0.00 0.00 0.00 4.34
1641 4894 0.028902 CTCACACACACTCGACGACA 59.971 55.000 0.00 0.00 0.00 4.35
1642 4895 0.666374 TCACACACACTCGACGACAT 59.334 50.000 0.00 0.00 0.00 3.06
1643 4896 1.053048 CACACACACTCGACGACATC 58.947 55.000 0.00 0.00 0.00 3.06
1644 4897 0.666374 ACACACACTCGACGACATCA 59.334 50.000 0.00 0.00 0.00 3.07
1645 4898 1.066454 ACACACACTCGACGACATCAA 59.934 47.619 0.00 0.00 0.00 2.57
1646 4899 1.452025 CACACACTCGACGACATCAAC 59.548 52.381 0.00 0.00 0.00 3.18
1647 4900 1.066454 ACACACTCGACGACATCAACA 59.934 47.619 0.00 0.00 0.00 3.33
1648 4901 2.124122 CACACTCGACGACATCAACAA 58.876 47.619 0.00 0.00 0.00 2.83
1649 4902 2.538037 CACACTCGACGACATCAACAAA 59.462 45.455 0.00 0.00 0.00 2.83
1650 4903 3.184379 CACACTCGACGACATCAACAAAT 59.816 43.478 0.00 0.00 0.00 2.32
1651 4904 3.807622 ACACTCGACGACATCAACAAATT 59.192 39.130 0.00 0.00 0.00 1.82
1652 4905 4.084537 ACACTCGACGACATCAACAAATTC 60.085 41.667 0.00 0.00 0.00 2.17
1653 4906 4.055360 ACTCGACGACATCAACAAATTCA 58.945 39.130 0.00 0.00 0.00 2.57
1654 4907 4.084537 ACTCGACGACATCAACAAATTCAC 60.085 41.667 0.00 0.00 0.00 3.18
1655 4908 4.055360 TCGACGACATCAACAAATTCACT 58.945 39.130 0.00 0.00 0.00 3.41
1656 4909 4.084589 TCGACGACATCAACAAATTCACTG 60.085 41.667 0.00 0.00 0.00 3.66
1657 4910 4.084589 CGACGACATCAACAAATTCACTGA 60.085 41.667 0.00 0.00 0.00 3.41
1658 4911 5.558083 CGACGACATCAACAAATTCACTGAA 60.558 40.000 0.00 0.00 0.00 3.02
1659 4912 6.130298 ACGACATCAACAAATTCACTGAAA 57.870 33.333 0.00 0.00 0.00 2.69
1660 4913 5.971202 ACGACATCAACAAATTCACTGAAAC 59.029 36.000 0.00 0.00 0.00 2.78
1661 4914 5.113975 CGACATCAACAAATTCACTGAAACG 59.886 40.000 0.00 0.00 0.00 3.60
1662 4915 5.890334 ACATCAACAAATTCACTGAAACGT 58.110 33.333 0.00 0.00 0.00 3.99
1663 4916 6.329496 ACATCAACAAATTCACTGAAACGTT 58.671 32.000 0.00 0.00 0.00 3.99
1664 4917 6.811170 ACATCAACAAATTCACTGAAACGTTT 59.189 30.769 14.57 14.57 0.00 3.60
1665 4918 6.862944 TCAACAAATTCACTGAAACGTTTC 57.137 33.333 29.72 29.72 37.69 2.78
1666 4919 6.382608 TCAACAAATTCACTGAAACGTTTCA 58.617 32.000 34.56 34.56 44.31 2.69
1667 4920 7.032580 TCAACAAATTCACTGAAACGTTTCAT 58.967 30.769 36.31 25.10 45.26 2.57
1668 4921 6.810888 ACAAATTCACTGAAACGTTTCATG 57.189 33.333 36.31 31.69 45.26 3.07
1669 4922 6.559810 ACAAATTCACTGAAACGTTTCATGA 58.440 32.000 36.31 32.91 45.26 3.07
1670 4923 7.202526 ACAAATTCACTGAAACGTTTCATGAT 58.797 30.769 36.31 24.92 45.26 2.45
1671 4924 7.167968 ACAAATTCACTGAAACGTTTCATGATG 59.832 33.333 36.31 30.67 45.26 3.07
1672 4925 4.145876 TCACTGAAACGTTTCATGATGC 57.854 40.909 36.31 14.25 45.26 3.91
1673 4926 3.058293 TCACTGAAACGTTTCATGATGCC 60.058 43.478 36.31 13.57 45.26 4.40
1674 4927 2.884012 ACTGAAACGTTTCATGATGCCA 59.116 40.909 36.31 17.06 45.26 4.92
1675 4928 3.507233 ACTGAAACGTTTCATGATGCCAT 59.493 39.130 36.31 16.15 45.26 4.40
1676 4929 4.699735 ACTGAAACGTTTCATGATGCCATA 59.300 37.500 36.31 15.23 45.26 2.74
1677 4930 4.980590 TGAAACGTTTCATGATGCCATAC 58.019 39.130 33.86 9.67 41.88 2.39
1678 4931 4.457257 TGAAACGTTTCATGATGCCATACA 59.543 37.500 33.86 12.05 41.88 2.29
1679 4932 5.048434 TGAAACGTTTCATGATGCCATACAA 60.048 36.000 33.86 11.06 41.88 2.41
1680 4933 4.355543 ACGTTTCATGATGCCATACAAC 57.644 40.909 0.00 0.00 0.00 3.32
1681 4934 3.128589 ACGTTTCATGATGCCATACAACC 59.871 43.478 0.00 0.00 0.00 3.77
1682 4935 3.128415 CGTTTCATGATGCCATACAACCA 59.872 43.478 0.00 0.00 0.00 3.67
1683 4936 4.380339 CGTTTCATGATGCCATACAACCAA 60.380 41.667 0.00 0.00 0.00 3.67
1684 4937 4.717233 TTCATGATGCCATACAACCAAC 57.283 40.909 0.00 0.00 0.00 3.77
1685 4938 3.694926 TCATGATGCCATACAACCAACA 58.305 40.909 0.00 0.00 0.00 3.33
1686 4939 4.085009 TCATGATGCCATACAACCAACAA 58.915 39.130 0.00 0.00 0.00 2.83
1687 4940 3.932545 TGATGCCATACAACCAACAAC 57.067 42.857 0.00 0.00 0.00 3.32
1688 4941 2.227626 TGATGCCATACAACCAACAACG 59.772 45.455 0.00 0.00 0.00 4.10
1689 4942 1.681538 TGCCATACAACCAACAACGT 58.318 45.000 0.00 0.00 0.00 3.99
1690 4943 1.335182 TGCCATACAACCAACAACGTG 59.665 47.619 0.00 0.00 0.00 4.49
1691 4944 1.928595 GCCATACAACCAACAACGTGC 60.929 52.381 0.00 0.00 0.00 5.34
1692 4945 1.606668 CCATACAACCAACAACGTGCT 59.393 47.619 0.00 0.00 0.00 4.40
1693 4946 2.809119 CCATACAACCAACAACGTGCTA 59.191 45.455 0.00 0.00 0.00 3.49
1694 4947 3.251245 CCATACAACCAACAACGTGCTAA 59.749 43.478 0.00 0.00 0.00 3.09
1695 4948 4.261238 CCATACAACCAACAACGTGCTAAA 60.261 41.667 0.00 0.00 0.00 1.85
1696 4949 5.457140 CATACAACCAACAACGTGCTAAAT 58.543 37.500 0.00 0.00 0.00 1.40
1697 4950 3.701241 ACAACCAACAACGTGCTAAATG 58.299 40.909 0.00 0.00 0.00 2.32
1698 4951 3.049206 CAACCAACAACGTGCTAAATGG 58.951 45.455 0.00 0.00 0.00 3.16
1699 4952 2.303175 ACCAACAACGTGCTAAATGGT 58.697 42.857 0.00 0.00 34.98 3.55
1700 4953 2.034053 ACCAACAACGTGCTAAATGGTG 59.966 45.455 7.60 1.54 38.22 4.17
1703 4956 3.347958 ACAACGTGCTAAATGGTGTTG 57.652 42.857 0.00 1.71 43.50 3.33
1704 4957 2.685897 ACAACGTGCTAAATGGTGTTGT 59.314 40.909 2.96 2.96 43.50 3.32
1705 4958 3.042189 CAACGTGCTAAATGGTGTTGTG 58.958 45.455 0.00 0.00 33.78 3.33
1706 4959 2.294074 ACGTGCTAAATGGTGTTGTGT 58.706 42.857 0.00 0.00 0.00 3.72
1707 4960 2.032799 ACGTGCTAAATGGTGTTGTGTG 59.967 45.455 0.00 0.00 0.00 3.82
1708 4961 2.032799 CGTGCTAAATGGTGTTGTGTGT 59.967 45.455 0.00 0.00 0.00 3.72
1709 4962 3.371168 GTGCTAAATGGTGTTGTGTGTG 58.629 45.455 0.00 0.00 0.00 3.82
1710 4963 3.020274 TGCTAAATGGTGTTGTGTGTGT 58.980 40.909 0.00 0.00 0.00 3.72
1711 4964 4.035792 GTGCTAAATGGTGTTGTGTGTGTA 59.964 41.667 0.00 0.00 0.00 2.90
1712 4965 4.035792 TGCTAAATGGTGTTGTGTGTGTAC 59.964 41.667 0.00 0.00 0.00 2.90
1713 4966 4.274950 GCTAAATGGTGTTGTGTGTGTACT 59.725 41.667 0.00 0.00 0.00 2.73
1714 4967 5.220970 GCTAAATGGTGTTGTGTGTGTACTT 60.221 40.000 0.00 0.00 0.00 2.24
1715 4968 6.017770 GCTAAATGGTGTTGTGTGTGTACTTA 60.018 38.462 0.00 0.00 0.00 2.24
1716 4969 6.761099 AAATGGTGTTGTGTGTGTACTTAA 57.239 33.333 0.00 0.00 0.00 1.85
1717 4970 6.371809 AATGGTGTTGTGTGTGTACTTAAG 57.628 37.500 0.00 0.00 0.00 1.85
1718 4971 4.193090 TGGTGTTGTGTGTGTACTTAAGG 58.807 43.478 7.53 0.00 0.00 2.69
1719 4972 4.193865 GGTGTTGTGTGTGTACTTAAGGT 58.806 43.478 7.53 0.00 0.00 3.50
1720 4973 4.034742 GGTGTTGTGTGTGTACTTAAGGTG 59.965 45.833 7.53 0.00 0.00 4.00
1721 4974 4.632688 GTGTTGTGTGTGTACTTAAGGTGT 59.367 41.667 7.53 0.00 0.00 4.16
1722 4975 5.122711 GTGTTGTGTGTGTACTTAAGGTGTT 59.877 40.000 7.53 0.00 0.00 3.32
1723 4976 5.706369 TGTTGTGTGTGTACTTAAGGTGTTT 59.294 36.000 7.53 0.00 0.00 2.83
1724 4977 6.128227 TGTTGTGTGTGTACTTAAGGTGTTTC 60.128 38.462 7.53 0.00 0.00 2.78
1725 4978 4.877251 TGTGTGTGTACTTAAGGTGTTTCC 59.123 41.667 7.53 0.00 0.00 3.13
1726 4979 4.274214 GTGTGTGTACTTAAGGTGTTTCCC 59.726 45.833 7.53 0.00 36.75 3.97
1727 4980 4.080469 TGTGTGTACTTAAGGTGTTTCCCA 60.080 41.667 7.53 0.00 36.75 4.37
1728 4981 4.883006 GTGTGTACTTAAGGTGTTTCCCAA 59.117 41.667 7.53 0.00 36.75 4.12
1729 4982 5.357596 GTGTGTACTTAAGGTGTTTCCCAAA 59.642 40.000 7.53 0.00 36.75 3.28
1730 4983 5.950549 TGTGTACTTAAGGTGTTTCCCAAAA 59.049 36.000 7.53 0.00 36.75 2.44
1731 4984 6.608002 TGTGTACTTAAGGTGTTTCCCAAAAT 59.392 34.615 7.53 0.00 36.75 1.82
1732 4985 7.143340 GTGTACTTAAGGTGTTTCCCAAAATC 58.857 38.462 7.53 0.00 36.75 2.17
1733 4986 7.013942 GTGTACTTAAGGTGTTTCCCAAAATCT 59.986 37.037 7.53 0.00 36.75 2.40
1734 4987 7.562088 TGTACTTAAGGTGTTTCCCAAAATCTT 59.438 33.333 7.53 0.00 36.75 2.40
1735 4988 7.432148 ACTTAAGGTGTTTCCCAAAATCTTT 57.568 32.000 7.53 0.00 36.75 2.52
1736 4989 8.541899 ACTTAAGGTGTTTCCCAAAATCTTTA 57.458 30.769 7.53 0.00 36.75 1.85
1737 4990 8.418662 ACTTAAGGTGTTTCCCAAAATCTTTAC 58.581 33.333 7.53 0.00 36.75 2.01
1738 4991 8.541899 TTAAGGTGTTTCCCAAAATCTTTACT 57.458 30.769 0.00 0.00 36.75 2.24
1739 4992 6.405278 AGGTGTTTCCCAAAATCTTTACTG 57.595 37.500 0.00 0.00 36.75 2.74
1740 4993 6.133356 AGGTGTTTCCCAAAATCTTTACTGA 58.867 36.000 0.00 0.00 36.75 3.41
1741 4994 6.040504 AGGTGTTTCCCAAAATCTTTACTGAC 59.959 38.462 0.00 0.00 36.75 3.51
1742 4995 6.183360 GGTGTTTCCCAAAATCTTTACTGACA 60.183 38.462 0.00 0.00 0.00 3.58
1743 4996 6.695713 GTGTTTCCCAAAATCTTTACTGACAC 59.304 38.462 0.00 0.00 0.00 3.67
1744 4997 6.605594 TGTTTCCCAAAATCTTTACTGACACT 59.394 34.615 0.00 0.00 0.00 3.55
1745 4998 7.776030 TGTTTCCCAAAATCTTTACTGACACTA 59.224 33.333 0.00 0.00 0.00 2.74
1746 4999 8.793592 GTTTCCCAAAATCTTTACTGACACTAT 58.206 33.333 0.00 0.00 0.00 2.12
1747 5000 8.934023 TTCCCAAAATCTTTACTGACACTATT 57.066 30.769 0.00 0.00 0.00 1.73
1748 5001 8.934023 TCCCAAAATCTTTACTGACACTATTT 57.066 30.769 0.00 0.00 0.00 1.40
1749 5002 9.010029 TCCCAAAATCTTTACTGACACTATTTC 57.990 33.333 0.00 0.00 0.00 2.17
1750 5003 8.792633 CCCAAAATCTTTACTGACACTATTTCA 58.207 33.333 0.00 0.00 0.00 2.69
1778 5031 9.869757 ACAATATAAAAATCAACCTTAAGCCAC 57.130 29.630 0.00 0.00 0.00 5.01
1782 5035 5.869649 AAAATCAACCTTAAGCCACTTGT 57.130 34.783 0.00 0.00 0.00 3.16
1783 5036 5.869649 AAATCAACCTTAAGCCACTTGTT 57.130 34.783 0.00 0.00 0.00 2.83
1784 5037 5.869649 AATCAACCTTAAGCCACTTGTTT 57.130 34.783 0.00 0.00 0.00 2.83
1785 5038 6.969993 AATCAACCTTAAGCCACTTGTTTA 57.030 33.333 0.00 0.00 0.00 2.01
1786 5039 5.761165 TCAACCTTAAGCCACTTGTTTAC 57.239 39.130 0.00 0.00 0.00 2.01
1787 5040 5.194432 TCAACCTTAAGCCACTTGTTTACA 58.806 37.500 0.00 0.00 0.00 2.41
1788 5041 5.830991 TCAACCTTAAGCCACTTGTTTACAT 59.169 36.000 0.00 0.00 0.00 2.29
1789 5042 5.705609 ACCTTAAGCCACTTGTTTACATG 57.294 39.130 0.00 0.00 0.00 3.21
1790 5043 5.381757 ACCTTAAGCCACTTGTTTACATGA 58.618 37.500 0.00 0.00 0.00 3.07
1791 5044 5.830991 ACCTTAAGCCACTTGTTTACATGAA 59.169 36.000 0.00 0.00 0.00 2.57
1792 5045 6.016276 ACCTTAAGCCACTTGTTTACATGAAG 60.016 38.462 0.00 0.00 0.00 3.02
1793 5046 3.923017 AGCCACTTGTTTACATGAAGC 57.077 42.857 0.00 5.20 0.00 3.86
1794 5047 3.490348 AGCCACTTGTTTACATGAAGCT 58.510 40.909 0.00 6.98 32.66 3.74
1795 5048 3.503748 AGCCACTTGTTTACATGAAGCTC 59.496 43.478 0.00 0.00 32.33 4.09
1796 5049 3.667960 GCCACTTGTTTACATGAAGCTCG 60.668 47.826 0.00 0.00 0.00 5.03
1797 5050 3.482786 CACTTGTTTACATGAAGCTCGC 58.517 45.455 0.00 0.00 0.00 5.03
1798 5051 3.058983 CACTTGTTTACATGAAGCTCGCA 60.059 43.478 0.00 0.00 0.00 5.10
1799 5052 3.753272 ACTTGTTTACATGAAGCTCGCAT 59.247 39.130 0.00 0.00 0.00 4.73
1800 5053 4.142816 ACTTGTTTACATGAAGCTCGCATC 60.143 41.667 0.00 0.00 0.00 3.91
1801 5054 3.333804 TGTTTACATGAAGCTCGCATCA 58.666 40.909 0.00 0.00 0.00 3.07
1802 5055 3.371898 TGTTTACATGAAGCTCGCATCAG 59.628 43.478 0.00 0.00 0.00 2.90
1803 5056 1.575244 TACATGAAGCTCGCATCAGC 58.425 50.000 0.00 0.00 39.99 4.26
1804 5057 0.392060 ACATGAAGCTCGCATCAGCA 60.392 50.000 0.00 0.00 42.40 4.41
1805 5058 0.305009 CATGAAGCTCGCATCAGCAG 59.695 55.000 3.20 0.00 42.40 4.24
1806 5059 0.107800 ATGAAGCTCGCATCAGCAGT 60.108 50.000 3.20 0.00 42.40 4.40
1807 5060 0.321034 TGAAGCTCGCATCAGCAGTT 60.321 50.000 2.43 0.00 42.40 3.16
1808 5061 0.801251 GAAGCTCGCATCAGCAGTTT 59.199 50.000 2.43 0.00 42.40 2.66
1809 5062 1.198637 GAAGCTCGCATCAGCAGTTTT 59.801 47.619 2.43 0.00 42.40 2.43
1813 5066 1.265095 CTCGCATCAGCAGTTTTGTGT 59.735 47.619 0.00 0.00 42.27 3.72
1820 5073 4.811555 TCAGCAGTTTTGTGTACATCAC 57.188 40.909 0.00 0.00 46.31 3.06
1840 5093 4.099881 TCACTGTATACGGGTTGGTTATCC 59.900 45.833 16.08 0.00 0.00 2.59
1841 5094 4.100498 CACTGTATACGGGTTGGTTATCCT 59.900 45.833 16.08 0.00 34.23 3.24
1847 5100 1.463674 GGGTTGGTTATCCTGCACTG 58.536 55.000 0.00 0.00 34.23 3.66
1862 5115 3.930336 TGCACTGTGTGAAATAGAGAGG 58.070 45.455 9.86 0.00 35.23 3.69
1903 5162 8.936070 TTGTAACGTCTAGCATATGTTATTGT 57.064 30.769 4.29 0.00 0.00 2.71
1907 5166 7.941795 ACGTCTAGCATATGTTATTGTAACC 57.058 36.000 4.29 0.00 0.00 2.85
1908 5167 7.723324 ACGTCTAGCATATGTTATTGTAACCT 58.277 34.615 4.29 0.00 0.00 3.50
1909 5168 8.202137 ACGTCTAGCATATGTTATTGTAACCTT 58.798 33.333 4.29 0.00 0.00 3.50
1910 5169 9.042008 CGTCTAGCATATGTTATTGTAACCTTT 57.958 33.333 4.29 0.00 0.00 3.11
1914 5173 8.746052 AGCATATGTTATTGTAACCTTTAGCA 57.254 30.769 4.29 0.00 0.00 3.49
1915 5174 8.621286 AGCATATGTTATTGTAACCTTTAGCAC 58.379 33.333 4.29 0.00 0.00 4.40
1916 5175 8.402472 GCATATGTTATTGTAACCTTTAGCACA 58.598 33.333 4.29 0.00 0.00 4.57
1919 5178 7.151999 TGTTATTGTAACCTTTAGCACATGG 57.848 36.000 0.00 0.00 0.00 3.66
1928 5187 3.541632 CTTTAGCACATGGTATCGGGTT 58.458 45.455 0.00 0.00 0.00 4.11
1930 5189 0.107214 AGCACATGGTATCGGGTTGG 60.107 55.000 0.00 0.00 0.00 3.77
1953 5212 5.280985 GGAATCAACATACCCTATGGCCATA 60.281 44.000 24.02 24.02 40.47 2.74
1954 5213 5.858876 ATCAACATACCCTATGGCCATAA 57.141 39.130 25.38 11.89 40.47 1.90
2050 5314 5.339778 GGGGTAGGGAACATATAAATAGGCC 60.340 48.000 0.00 0.00 0.00 5.19
2065 5329 0.762842 AGGCCTTTCCAAAACACCCC 60.763 55.000 0.00 0.00 37.29 4.95
2073 5337 6.639563 CCTTTCCAAAACACCCCATATAAAG 58.360 40.000 0.00 0.00 0.00 1.85
2075 5339 7.038658 CCTTTCCAAAACACCCCATATAAAGAA 60.039 37.037 0.00 0.00 0.00 2.52
2076 5340 7.475137 TTCCAAAACACCCCATATAAAGAAG 57.525 36.000 0.00 0.00 0.00 2.85
2077 5341 5.955355 TCCAAAACACCCCATATAAAGAAGG 59.045 40.000 0.00 0.00 0.00 3.46
2078 5342 5.719563 CCAAAACACCCCATATAAAGAAGGT 59.280 40.000 0.00 0.00 0.00 3.50
2079 5343 6.893005 CCAAAACACCCCATATAAAGAAGGTA 59.107 38.462 0.00 0.00 0.00 3.08
2080 5344 7.563556 CCAAAACACCCCATATAAAGAAGGTAT 59.436 37.037 0.00 0.00 0.00 2.73
2188 5452 9.241317 CTGAGTGATTTTCATATAAAACATGCC 57.759 33.333 0.00 0.00 0.00 4.40
2214 5478 3.611025 TGGAGTTGGGGTTTGAAAGAT 57.389 42.857 0.00 0.00 0.00 2.40
2217 5481 5.016173 TGGAGTTGGGGTTTGAAAGATATG 58.984 41.667 0.00 0.00 0.00 1.78
2220 5484 6.381133 GGAGTTGGGGTTTGAAAGATATGAAT 59.619 38.462 0.00 0.00 0.00 2.57
2289 5554 1.693606 AGAGTTGTTGGGCCCAAATTG 59.306 47.619 38.70 0.00 37.70 2.32
2290 5555 0.108396 AGTTGTTGGGCCCAAATTGC 59.892 50.000 38.70 25.65 37.70 3.56
2302 5567 5.367302 GGCCCAAATTGCAACATTATACAT 58.633 37.500 0.00 0.00 0.00 2.29
2303 5568 5.466393 GGCCCAAATTGCAACATTATACATC 59.534 40.000 0.00 0.00 0.00 3.06
2308 5573 9.537192 CCAAATTGCAACATTATACATCTCATT 57.463 29.630 0.00 0.00 0.00 2.57
2313 5578 8.449251 TGCAACATTATACATCTCATTTGCTA 57.551 30.769 0.00 0.00 38.10 3.49
2323 5588 6.115446 ACATCTCATTTGCTAAGAATTCGGA 58.885 36.000 0.00 0.00 0.00 4.55
2327 5592 5.977635 TCATTTGCTAAGAATTCGGAGAGA 58.022 37.500 12.32 0.00 38.43 3.10
2330 5595 4.909696 TGCTAAGAATTCGGAGAGAGAG 57.090 45.455 12.32 0.00 38.43 3.20
2331 5596 4.527944 TGCTAAGAATTCGGAGAGAGAGA 58.472 43.478 12.32 0.00 38.43 3.10
2332 5597 4.578516 TGCTAAGAATTCGGAGAGAGAGAG 59.421 45.833 12.32 0.00 38.43 3.20
2333 5598 4.819630 GCTAAGAATTCGGAGAGAGAGAGA 59.180 45.833 12.32 0.00 38.43 3.10
2334 5599 5.298276 GCTAAGAATTCGGAGAGAGAGAGAA 59.702 44.000 12.32 0.00 38.43 2.87
2335 5600 6.183360 GCTAAGAATTCGGAGAGAGAGAGAAA 60.183 42.308 12.32 0.00 38.43 2.52
2336 5601 6.597832 AAGAATTCGGAGAGAGAGAGAAAA 57.402 37.500 0.00 0.00 38.43 2.29
2337 5602 5.961272 AGAATTCGGAGAGAGAGAGAAAAC 58.039 41.667 0.00 0.00 38.43 2.43
2338 5603 5.478679 AGAATTCGGAGAGAGAGAGAAAACA 59.521 40.000 0.00 0.00 38.43 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.100259 TGTTACTGTAACATAGCGCTTCTC 58.900 41.667 25.14 1.35 43.23 2.87
1 2 5.068234 TGTTACTGTAACATAGCGCTTCT 57.932 39.130 25.14 0.00 43.23 2.85
31 32 9.092338 TGACTAGTAGTTAATGAAAGGTGGTAA 57.908 33.333 3.85 0.00 0.00 2.85
33 34 7.549147 TGACTAGTAGTTAATGAAAGGTGGT 57.451 36.000 3.85 0.00 0.00 4.16
44 45 9.991906 AACTTTGCTTACATGACTAGTAGTTAA 57.008 29.630 3.85 0.00 0.00 2.01
46 47 8.904099 AAACTTTGCTTACATGACTAGTAGTT 57.096 30.769 3.85 0.00 0.00 2.24
47 48 8.904099 AAAACTTTGCTTACATGACTAGTAGT 57.096 30.769 1.37 1.37 0.00 2.73
49 50 9.555727 AAGAAAACTTTGCTTACATGACTAGTA 57.444 29.630 0.00 0.00 0.00 1.82
56 57 9.584839 GCATTTTAAGAAAACTTTGCTTACATG 57.415 29.630 1.82 8.21 32.37 3.21
57 58 8.487176 CGCATTTTAAGAAAACTTTGCTTACAT 58.513 29.630 1.82 0.00 32.37 2.29
58 59 7.515998 GCGCATTTTAAGAAAACTTTGCTTACA 60.516 33.333 0.30 0.00 32.37 2.41
59 60 6.785633 GCGCATTTTAAGAAAACTTTGCTTAC 59.214 34.615 0.30 0.00 32.37 2.34
62 63 5.049828 AGCGCATTTTAAGAAAACTTTGCT 58.950 33.333 11.47 3.42 32.37 3.91
63 64 5.328886 AGCGCATTTTAAGAAAACTTTGC 57.671 34.783 11.47 0.00 32.37 3.68
64 65 7.388290 TGTAGCGCATTTTAAGAAAACTTTG 57.612 32.000 11.47 0.00 32.37 2.77
65 66 8.587952 AATGTAGCGCATTTTAAGAAAACTTT 57.412 26.923 11.47 0.00 44.82 2.66
66 67 9.124807 GTAATGTAGCGCATTTTAAGAAAACTT 57.875 29.630 11.47 0.00 44.82 2.66
67 68 8.512138 AGTAATGTAGCGCATTTTAAGAAAACT 58.488 29.630 11.47 6.85 44.82 2.66
68 69 8.669394 AGTAATGTAGCGCATTTTAAGAAAAC 57.331 30.769 11.47 5.10 44.82 2.43
73 74 7.478520 AGGTAGTAATGTAGCGCATTTTAAG 57.521 36.000 11.47 0.00 44.82 1.85
76 77 7.046033 ACTTAGGTAGTAATGTAGCGCATTTT 58.954 34.615 11.47 0.00 44.82 1.82
77 78 6.579865 ACTTAGGTAGTAATGTAGCGCATTT 58.420 36.000 11.47 0.00 44.82 2.32
79 80 5.786264 ACTTAGGTAGTAATGTAGCGCAT 57.214 39.130 11.47 0.00 40.03 4.73
82 83 7.358830 GGAGTAACTTAGGTAGTAATGTAGCG 58.641 42.308 0.00 0.00 35.54 4.26
84 85 8.628280 GTGGGAGTAACTTAGGTAGTAATGTAG 58.372 40.741 0.00 0.00 35.54 2.74
85 86 8.339247 AGTGGGAGTAACTTAGGTAGTAATGTA 58.661 37.037 0.00 0.00 35.54 2.29
86 87 7.187676 AGTGGGAGTAACTTAGGTAGTAATGT 58.812 38.462 0.00 0.00 35.54 2.71
87 88 7.657023 AGTGGGAGTAACTTAGGTAGTAATG 57.343 40.000 0.00 0.00 35.54 1.90
88 89 9.364653 CATAGTGGGAGTAACTTAGGTAGTAAT 57.635 37.037 0.00 0.00 35.54 1.89
89 90 8.560039 TCATAGTGGGAGTAACTTAGGTAGTAA 58.440 37.037 0.00 0.00 35.54 2.24
90 91 7.995488 GTCATAGTGGGAGTAACTTAGGTAGTA 59.005 40.741 0.00 0.00 35.54 1.82
91 92 6.832900 GTCATAGTGGGAGTAACTTAGGTAGT 59.167 42.308 0.00 0.00 39.32 2.73
92 93 7.061688 AGTCATAGTGGGAGTAACTTAGGTAG 58.938 42.308 0.00 0.00 0.00 3.18
94 95 5.840081 AGTCATAGTGGGAGTAACTTAGGT 58.160 41.667 0.00 0.00 0.00 3.08
95 96 6.016108 GCTAGTCATAGTGGGAGTAACTTAGG 60.016 46.154 0.00 0.00 0.00 2.69
96 97 6.016108 GGCTAGTCATAGTGGGAGTAACTTAG 60.016 46.154 0.00 0.00 0.00 2.18
98 99 4.650131 GGCTAGTCATAGTGGGAGTAACTT 59.350 45.833 0.00 0.00 0.00 2.66
99 100 4.079096 AGGCTAGTCATAGTGGGAGTAACT 60.079 45.833 0.00 0.00 0.00 2.24
104 105 4.322349 GCATTAGGCTAGTCATAGTGGGAG 60.322 50.000 0.00 0.00 40.25 4.30
105 106 3.578716 GCATTAGGCTAGTCATAGTGGGA 59.421 47.826 0.00 0.00 40.25 4.37
106 107 3.324846 TGCATTAGGCTAGTCATAGTGGG 59.675 47.826 0.00 0.00 45.15 4.61
107 108 4.607293 TGCATTAGGCTAGTCATAGTGG 57.393 45.455 0.00 0.00 45.15 4.00
108 109 6.462500 AGAATGCATTAGGCTAGTCATAGTG 58.538 40.000 12.97 0.00 45.15 2.74
109 110 6.295575 GGAGAATGCATTAGGCTAGTCATAGT 60.296 42.308 12.97 0.00 45.15 2.12
110 111 6.105333 GGAGAATGCATTAGGCTAGTCATAG 58.895 44.000 12.97 0.00 45.15 2.23
111 112 5.336770 CGGAGAATGCATTAGGCTAGTCATA 60.337 44.000 12.97 0.00 45.15 2.15
112 113 4.562347 CGGAGAATGCATTAGGCTAGTCAT 60.562 45.833 12.97 0.00 45.15 3.06
113 114 3.243873 CGGAGAATGCATTAGGCTAGTCA 60.244 47.826 12.97 0.00 45.15 3.41
114 115 3.321497 CGGAGAATGCATTAGGCTAGTC 58.679 50.000 12.97 0.00 45.15 2.59
116 117 2.693069 CCGGAGAATGCATTAGGCTAG 58.307 52.381 12.97 3.67 45.15 3.42
117 118 1.270839 GCCGGAGAATGCATTAGGCTA 60.271 52.381 26.77 0.00 45.15 3.93
118 119 0.536006 GCCGGAGAATGCATTAGGCT 60.536 55.000 26.77 16.25 45.15 4.58
120 121 0.109342 AGGCCGGAGAATGCATTAGG 59.891 55.000 12.97 14.05 0.00 2.69
121 122 1.071385 AGAGGCCGGAGAATGCATTAG 59.929 52.381 12.97 4.43 0.00 1.73
122 123 1.070758 GAGAGGCCGGAGAATGCATTA 59.929 52.381 12.97 0.00 0.00 1.90
123 124 0.179034 GAGAGGCCGGAGAATGCATT 60.179 55.000 12.83 12.83 0.00 3.56
124 125 1.053264 AGAGAGGCCGGAGAATGCAT 61.053 55.000 5.05 0.00 0.00 3.96
125 126 1.680522 GAGAGAGGCCGGAGAATGCA 61.681 60.000 5.05 0.00 0.00 3.96
126 127 1.068921 GAGAGAGGCCGGAGAATGC 59.931 63.158 5.05 0.00 0.00 3.56
129 130 2.675371 TCGAGAGAGGCCGGAGAA 59.325 61.111 5.05 0.00 34.84 2.87
140 141 2.189342 GCACGGAGAAAGAATCGAGAG 58.811 52.381 0.00 0.00 0.00 3.20
142 143 0.917259 CGCACGGAGAAAGAATCGAG 59.083 55.000 0.00 0.00 0.00 4.04
143 144 0.242825 ACGCACGGAGAAAGAATCGA 59.757 50.000 0.00 0.00 0.00 3.59
144 145 0.366871 CACGCACGGAGAAAGAATCG 59.633 55.000 0.00 0.00 0.00 3.34
145 146 1.390463 GTCACGCACGGAGAAAGAATC 59.610 52.381 0.00 0.00 0.00 2.52
146 147 1.270094 TGTCACGCACGGAGAAAGAAT 60.270 47.619 0.00 0.00 0.00 2.40
147 148 0.103390 TGTCACGCACGGAGAAAGAA 59.897 50.000 0.00 0.00 0.00 2.52
149 150 1.853319 GTGTCACGCACGGAGAAAG 59.147 57.895 0.00 0.00 38.45 2.62
150 151 4.021650 GTGTCACGCACGGAGAAA 57.978 55.556 0.00 0.00 38.45 2.52
157 158 2.928361 CAGTTCCGTGTCACGCAC 59.072 61.111 20.01 17.01 40.91 5.34
158 159 2.964925 GCAGTTCCGTGTCACGCA 60.965 61.111 20.01 1.33 40.91 5.24
159 160 4.059459 CGCAGTTCCGTGTCACGC 62.059 66.667 20.01 6.61 40.91 5.34
160 161 2.657296 ACGCAGTTCCGTGTCACG 60.657 61.111 18.54 18.54 37.78 4.35
172 173 0.179215 GATTGAGCCGTTGAACGCAG 60.179 55.000 12.95 0.48 40.91 5.18
173 174 1.866237 GATTGAGCCGTTGAACGCA 59.134 52.632 12.95 2.05 40.91 5.24
174 175 1.225745 CGATTGAGCCGTTGAACGC 60.226 57.895 12.95 8.07 40.91 4.84
175 176 1.225745 GCGATTGAGCCGTTGAACG 60.226 57.895 11.30 11.30 42.11 3.95
176 177 1.225745 CGCGATTGAGCCGTTGAAC 60.226 57.895 0.00 0.00 0.00 3.18
177 178 1.351430 CTCGCGATTGAGCCGTTGAA 61.351 55.000 10.36 0.00 0.00 2.69
178 179 1.805539 CTCGCGATTGAGCCGTTGA 60.806 57.895 10.36 0.00 0.00 3.18
180 181 2.509336 CCTCGCGATTGAGCCGTT 60.509 61.111 10.36 0.00 34.56 4.44
181 182 3.449227 TCCTCGCGATTGAGCCGT 61.449 61.111 10.36 0.00 34.56 5.68
182 183 2.956964 GTCCTCGCGATTGAGCCG 60.957 66.667 10.36 0.00 34.56 5.52
183 184 2.586357 GGTCCTCGCGATTGAGCC 60.586 66.667 20.85 14.93 34.56 4.70
185 186 1.066587 GGAGGTCCTCGCGATTGAG 59.933 63.158 10.36 0.00 35.70 3.02
187 188 2.278857 CGGAGGTCCTCGCGATTG 60.279 66.667 19.38 4.01 0.00 2.67
188 189 1.885163 AAACGGAGGTCCTCGCGATT 61.885 55.000 26.71 20.79 31.94 3.34
189 190 1.885163 AAAACGGAGGTCCTCGCGAT 61.885 55.000 26.71 17.27 31.94 4.58
190 191 2.482296 GAAAACGGAGGTCCTCGCGA 62.482 60.000 26.71 9.26 31.94 5.87
191 192 2.048503 AAAACGGAGGTCCTCGCG 60.049 61.111 21.34 21.34 33.06 5.87
192 193 0.601841 TTGAAAACGGAGGTCCTCGC 60.602 55.000 12.91 5.17 0.00 5.03
193 194 2.094762 ATTGAAAACGGAGGTCCTCG 57.905 50.000 12.91 10.46 0.00 4.63
194 195 3.532542 CCTATTGAAAACGGAGGTCCTC 58.467 50.000 10.78 10.78 0.00 3.71
195 196 2.355818 GCCTATTGAAAACGGAGGTCCT 60.356 50.000 0.00 0.00 0.00 3.85
196 197 2.014857 GCCTATTGAAAACGGAGGTCC 58.985 52.381 0.00 0.00 0.00 4.46
197 198 2.014857 GGCCTATTGAAAACGGAGGTC 58.985 52.381 0.00 0.00 0.00 3.85
198 199 1.353022 TGGCCTATTGAAAACGGAGGT 59.647 47.619 3.32 0.00 0.00 3.85
199 200 1.743394 GTGGCCTATTGAAAACGGAGG 59.257 52.381 3.32 0.00 0.00 4.30
200 201 1.396996 CGTGGCCTATTGAAAACGGAG 59.603 52.381 3.32 0.00 0.00 4.63
202 203 0.450184 CCGTGGCCTATTGAAAACGG 59.550 55.000 12.00 12.00 43.83 4.44
203 204 0.179174 GCCGTGGCCTATTGAAAACG 60.179 55.000 3.32 2.09 34.56 3.60
204 205 1.135402 CAGCCGTGGCCTATTGAAAAC 60.135 52.381 7.39 0.00 43.17 2.43
205 206 1.173043 CAGCCGTGGCCTATTGAAAA 58.827 50.000 7.39 0.00 43.17 2.29
207 208 1.748879 GCAGCCGTGGCCTATTGAA 60.749 57.895 7.39 0.00 43.17 2.69
209 210 3.576356 CGCAGCCGTGGCCTATTG 61.576 66.667 7.39 0.00 43.17 1.90
219 220 4.379243 AGGTCAAGGACGCAGCCG 62.379 66.667 0.00 0.00 41.14 5.52
220 221 2.435059 GAGGTCAAGGACGCAGCC 60.435 66.667 0.00 0.00 32.65 4.85
221 222 2.435059 GGAGGTCAAGGACGCAGC 60.435 66.667 0.00 0.00 32.65 5.25
222 223 1.374758 GTGGAGGTCAAGGACGCAG 60.375 63.158 0.00 0.00 32.65 5.18
224 225 2.047179 GGTGGAGGTCAAGGACGC 60.047 66.667 0.00 0.00 32.65 5.19
225 226 2.261671 CGGTGGAGGTCAAGGACG 59.738 66.667 0.00 0.00 32.65 4.79
226 227 2.047179 GCGGTGGAGGTCAAGGAC 60.047 66.667 0.00 0.00 0.00 3.85
227 228 3.319198 GGCGGTGGAGGTCAAGGA 61.319 66.667 0.00 0.00 0.00 3.36
228 229 4.410400 GGGCGGTGGAGGTCAAGG 62.410 72.222 0.00 0.00 0.00 3.61
229 230 4.760047 CGGGCGGTGGAGGTCAAG 62.760 72.222 0.00 0.00 0.00 3.02
250 251 3.483665 TTTCGCGAATGTCGGCGG 61.484 61.111 24.05 0.00 40.84 6.13
251 252 2.275812 GTTTCGCGAATGTCGGCG 60.276 61.111 24.05 0.00 40.84 6.46
254 255 0.026285 GGATGGTTTCGCGAATGTCG 59.974 55.000 24.05 0.00 43.89 4.35
255 256 0.377203 GGGATGGTTTCGCGAATGTC 59.623 55.000 24.05 16.68 0.00 3.06
256 257 0.322098 TGGGATGGTTTCGCGAATGT 60.322 50.000 24.05 8.89 40.08 2.71
258 259 1.308998 GATGGGATGGTTTCGCGAAT 58.691 50.000 24.05 7.50 40.08 3.34
259 260 0.746563 GGATGGGATGGTTTCGCGAA 60.747 55.000 19.38 19.38 40.08 4.70
261 262 2.186826 GGGATGGGATGGTTTCGCG 61.187 63.158 0.00 0.00 40.08 5.87
262 263 2.186826 CGGGATGGGATGGTTTCGC 61.187 63.158 0.00 0.00 37.78 4.70
263 264 2.186826 GCGGGATGGGATGGTTTCG 61.187 63.158 0.00 0.00 0.00 3.46
281 282 2.266055 GGAGAACAGAGCCGTGGG 59.734 66.667 0.00 0.00 0.00 4.61
282 283 1.079543 CAGGAGAACAGAGCCGTGG 60.080 63.158 0.00 0.00 0.00 4.94
283 284 1.739562 GCAGGAGAACAGAGCCGTG 60.740 63.158 0.00 0.00 0.00 4.94
284 285 2.659610 GCAGGAGAACAGAGCCGT 59.340 61.111 0.00 0.00 0.00 5.68
285 286 2.125350 GGCAGGAGAACAGAGCCG 60.125 66.667 0.00 0.00 35.42 5.52
287 288 1.220477 GGAGGCAGGAGAACAGAGC 59.780 63.158 0.00 0.00 0.00 4.09
288 289 0.536260 CAGGAGGCAGGAGAACAGAG 59.464 60.000 0.00 0.00 0.00 3.35
289 290 0.906756 CCAGGAGGCAGGAGAACAGA 60.907 60.000 0.00 0.00 0.00 3.41
290 291 0.906756 TCCAGGAGGCAGGAGAACAG 60.907 60.000 0.00 0.00 33.74 3.16
291 292 0.473694 TTCCAGGAGGCAGGAGAACA 60.474 55.000 0.00 0.00 34.91 3.18
293 294 1.201429 GGTTCCAGGAGGCAGGAGAA 61.201 60.000 0.00 0.00 34.91 2.87
294 295 1.613630 GGTTCCAGGAGGCAGGAGA 60.614 63.158 0.00 0.00 34.91 3.71
295 296 2.993853 GGTTCCAGGAGGCAGGAG 59.006 66.667 0.00 0.00 34.91 3.69
296 297 3.003173 CGGTTCCAGGAGGCAGGA 61.003 66.667 0.00 0.00 33.74 3.86
298 299 3.322466 ACCGGTTCCAGGAGGCAG 61.322 66.667 0.00 0.00 33.74 4.85
299 300 3.636231 CACCGGTTCCAGGAGGCA 61.636 66.667 2.97 0.00 33.74 4.75
300 301 2.288025 TACACCGGTTCCAGGAGGC 61.288 63.158 2.97 0.00 33.74 4.70
302 303 0.531200 GAGTACACCGGTTCCAGGAG 59.469 60.000 2.97 0.00 0.00 3.69
304 305 1.214589 CGAGTACACCGGTTCCAGG 59.785 63.158 2.97 0.00 0.00 4.45
305 306 0.109412 GACGAGTACACCGGTTCCAG 60.109 60.000 2.97 0.00 0.00 3.86
306 307 0.538057 AGACGAGTACACCGGTTCCA 60.538 55.000 2.97 0.00 0.00 3.53
307 308 0.169894 GAGACGAGTACACCGGTTCC 59.830 60.000 2.97 0.00 0.00 3.62
308 309 0.169894 GGAGACGAGTACACCGGTTC 59.830 60.000 2.97 0.00 0.00 3.62
309 310 2.261215 GGAGACGAGTACACCGGTT 58.739 57.895 2.97 0.00 0.00 4.44
310 311 3.993535 GGAGACGAGTACACCGGT 58.006 61.111 0.00 0.00 0.00 5.28
370 371 2.430610 GGAGCTGTCGAGGATGGCT 61.431 63.158 0.00 0.00 35.86 4.75
415 416 3.041940 AAACGCGCGTGAAGAGGG 61.042 61.111 38.44 3.43 38.49 4.30
420 421 2.938823 GAGCTCAAACGCGCGTGAA 61.939 57.895 38.44 22.86 34.40 3.18
443 444 4.819761 TGCTAGGAGCGCGCTTGG 62.820 66.667 36.87 23.17 46.26 3.61
641 677 4.936802 AGGACATCACTAGTTCACTACCT 58.063 43.478 0.00 0.00 0.00 3.08
689 1191 5.534407 TCTATCCGCGAATAAATACTGCAA 58.466 37.500 8.23 0.00 0.00 4.08
704 1212 2.770164 ACTAATGGCCATCTATCCGC 57.230 50.000 21.08 0.00 0.00 5.54
754 1271 2.181125 TCGCCACCTAACCTGACATAA 58.819 47.619 0.00 0.00 0.00 1.90
795 1312 0.465097 GCTATCAGTGGCTGCCATGT 60.465 55.000 26.22 12.79 35.28 3.21
799 1316 2.203266 GGGCTATCAGTGGCTGCC 60.203 66.667 12.87 12.87 42.56 4.85
874 3994 0.540830 AGAGCTAGATAGGCGTGGGG 60.541 60.000 0.00 0.00 34.52 4.96
925 4061 0.906066 TTATGGCTAGCGTGGGTTGA 59.094 50.000 9.00 0.00 0.00 3.18
934 4070 2.159043 TGACTCACTGCTTATGGCTAGC 60.159 50.000 6.04 6.04 42.39 3.42
954 4097 4.889427 TCGAAGGTCGATGCACTG 57.111 55.556 0.00 0.00 44.82 3.66
972 4120 6.091849 CCAGATCGATGCAAAGATATAGTTGG 59.908 42.308 0.54 7.08 0.00 3.77
975 4123 6.015095 TGACCAGATCGATGCAAAGATATAGT 60.015 38.462 0.54 4.21 0.00 2.12
983 4131 2.291365 CCATGACCAGATCGATGCAAA 58.709 47.619 0.54 0.00 0.00 3.68
984 4132 1.957668 CCATGACCAGATCGATGCAA 58.042 50.000 0.54 0.00 0.00 4.08
1125 4282 0.874390 AGCACGCATTCACGACATTT 59.126 45.000 0.00 0.00 36.70 2.32
1128 4285 1.859398 GAAGCACGCATTCACGACA 59.141 52.632 0.00 0.00 36.70 4.35
1207 4366 1.750682 GCAGTCCACTTGAACCTTGGT 60.751 52.381 0.00 0.00 0.00 3.67
1208 4367 0.954452 GCAGTCCACTTGAACCTTGG 59.046 55.000 0.00 0.00 0.00 3.61
1299 4467 3.688673 TGACGCATTGCACATTATTCTGA 59.311 39.130 9.69 0.00 0.00 3.27
1344 4525 0.534877 AGGTCTTGCATGCACGACAA 60.535 50.000 40.79 20.96 43.97 3.18
1368 4577 6.419413 GCAAGAAACACAAATATCCAACGAAA 59.581 34.615 0.00 0.00 0.00 3.46
1412 4621 0.325933 CAAGGAGCAGGTGGACATCA 59.674 55.000 0.00 0.00 0.00 3.07
1492 4734 7.681939 ACAAACTAAAAAGACTCAACTGACA 57.318 32.000 0.00 0.00 0.00 3.58
1585 4838 0.704008 CGTTGCAACGCATGAACATG 59.296 50.000 35.89 9.09 46.06 3.21
1587 4840 4.605119 CGTTGCAACGCATGAACA 57.395 50.000 35.89 0.00 46.06 3.18
1613 4866 2.301870 GAGTGTGTGTGAGGGGTGATTA 59.698 50.000 0.00 0.00 0.00 1.75
1616 4869 1.744320 CGAGTGTGTGTGAGGGGTGA 61.744 60.000 0.00 0.00 0.00 4.02
1617 4870 1.300931 CGAGTGTGTGTGAGGGGTG 60.301 63.158 0.00 0.00 0.00 4.61
1618 4871 1.456892 TCGAGTGTGTGTGAGGGGT 60.457 57.895 0.00 0.00 0.00 4.95
1619 4872 1.006102 GTCGAGTGTGTGTGAGGGG 60.006 63.158 0.00 0.00 0.00 4.79
1620 4873 1.371758 CGTCGAGTGTGTGTGAGGG 60.372 63.158 0.00 0.00 0.00 4.30
1621 4874 0.660595 GTCGTCGAGTGTGTGTGAGG 60.661 60.000 0.00 0.00 0.00 3.86
1622 4875 0.028902 TGTCGTCGAGTGTGTGTGAG 59.971 55.000 0.00 0.00 0.00 3.51
1623 4876 0.666374 ATGTCGTCGAGTGTGTGTGA 59.334 50.000 0.00 0.00 0.00 3.58
1624 4877 1.053048 GATGTCGTCGAGTGTGTGTG 58.947 55.000 0.00 0.00 0.00 3.82
1625 4878 0.666374 TGATGTCGTCGAGTGTGTGT 59.334 50.000 0.00 0.00 0.00 3.72
1626 4879 1.452025 GTTGATGTCGTCGAGTGTGTG 59.548 52.381 0.00 0.00 0.00 3.82
1627 4880 1.066454 TGTTGATGTCGTCGAGTGTGT 59.934 47.619 0.00 0.00 0.00 3.72
1628 4881 1.766069 TGTTGATGTCGTCGAGTGTG 58.234 50.000 0.00 0.00 0.00 3.82
1629 4882 2.502213 TTGTTGATGTCGTCGAGTGT 57.498 45.000 0.00 0.00 0.00 3.55
1630 4883 4.084589 TGAATTTGTTGATGTCGTCGAGTG 60.085 41.667 0.00 0.00 0.00 3.51
1631 4884 4.055360 TGAATTTGTTGATGTCGTCGAGT 58.945 39.130 0.00 0.00 0.00 4.18
1632 4885 4.150627 AGTGAATTTGTTGATGTCGTCGAG 59.849 41.667 0.00 0.00 0.00 4.04
1633 4886 4.055360 AGTGAATTTGTTGATGTCGTCGA 58.945 39.130 0.00 0.00 0.00 4.20
1634 4887 4.084589 TCAGTGAATTTGTTGATGTCGTCG 60.085 41.667 0.00 0.00 0.00 5.12
1635 4888 5.342806 TCAGTGAATTTGTTGATGTCGTC 57.657 39.130 0.00 0.00 0.00 4.20
1636 4889 5.749596 TTCAGTGAATTTGTTGATGTCGT 57.250 34.783 0.08 0.00 0.00 4.34
1637 4890 5.113975 CGTTTCAGTGAATTTGTTGATGTCG 59.886 40.000 6.36 0.00 0.00 4.35
1638 4891 5.971202 ACGTTTCAGTGAATTTGTTGATGTC 59.029 36.000 6.36 0.00 0.00 3.06
1639 4892 5.890334 ACGTTTCAGTGAATTTGTTGATGT 58.110 33.333 6.36 0.00 0.00 3.06
1640 4893 6.810888 AACGTTTCAGTGAATTTGTTGATG 57.189 33.333 6.36 0.00 0.00 3.07
1641 4894 7.032580 TGAAACGTTTCAGTGAATTTGTTGAT 58.967 30.769 33.86 0.00 41.88 2.57
1642 4895 6.382608 TGAAACGTTTCAGTGAATTTGTTGA 58.617 32.000 33.86 11.06 41.88 3.18
1643 4896 6.624710 TGAAACGTTTCAGTGAATTTGTTG 57.375 33.333 33.86 0.00 41.88 3.33
1656 4909 4.980590 TGTATGGCATCATGAAACGTTTC 58.019 39.130 29.72 29.72 37.69 2.78
1657 4910 5.160641 GTTGTATGGCATCATGAAACGTTT 58.839 37.500 14.57 14.57 34.96 3.60
1658 4911 4.380444 GGTTGTATGGCATCATGAAACGTT 60.380 41.667 1.65 0.00 34.03 3.99
1659 4912 3.128589 GGTTGTATGGCATCATGAAACGT 59.871 43.478 1.65 0.00 34.03 3.99
1660 4913 3.128415 TGGTTGTATGGCATCATGAAACG 59.872 43.478 1.65 0.00 34.03 3.60
1661 4914 4.717233 TGGTTGTATGGCATCATGAAAC 57.283 40.909 1.65 2.88 34.96 2.78
1662 4915 4.525874 TGTTGGTTGTATGGCATCATGAAA 59.474 37.500 1.65 0.00 34.96 2.69
1663 4916 4.085009 TGTTGGTTGTATGGCATCATGAA 58.915 39.130 1.65 0.00 34.96 2.57
1664 4917 3.694926 TGTTGGTTGTATGGCATCATGA 58.305 40.909 1.65 0.00 34.96 3.07
1665 4918 4.175516 GTTGTTGGTTGTATGGCATCATG 58.824 43.478 1.65 0.00 34.96 3.07
1666 4919 3.119531 CGTTGTTGGTTGTATGGCATCAT 60.120 43.478 1.65 0.00 37.40 2.45
1667 4920 2.227626 CGTTGTTGGTTGTATGGCATCA 59.772 45.455 1.65 0.00 0.00 3.07
1668 4921 2.227865 ACGTTGTTGGTTGTATGGCATC 59.772 45.455 1.65 0.00 0.00 3.91
1669 4922 2.030363 CACGTTGTTGGTTGTATGGCAT 60.030 45.455 4.88 4.88 0.00 4.40
1670 4923 1.335182 CACGTTGTTGGTTGTATGGCA 59.665 47.619 0.00 0.00 0.00 4.92
1671 4924 1.928595 GCACGTTGTTGGTTGTATGGC 60.929 52.381 0.00 0.00 0.00 4.40
1672 4925 1.606668 AGCACGTTGTTGGTTGTATGG 59.393 47.619 0.00 0.00 0.00 2.74
1673 4926 4.475763 TTAGCACGTTGTTGGTTGTATG 57.524 40.909 0.00 0.00 0.00 2.39
1674 4927 5.457140 CATTTAGCACGTTGTTGGTTGTAT 58.543 37.500 0.00 0.00 0.00 2.29
1675 4928 4.261238 CCATTTAGCACGTTGTTGGTTGTA 60.261 41.667 0.00 0.00 0.00 2.41
1676 4929 3.490078 CCATTTAGCACGTTGTTGGTTGT 60.490 43.478 0.00 0.00 0.00 3.32
1677 4930 3.049206 CCATTTAGCACGTTGTTGGTTG 58.951 45.455 0.00 0.00 0.00 3.77
1678 4931 2.691011 ACCATTTAGCACGTTGTTGGTT 59.309 40.909 0.00 0.00 32.23 3.67
1679 4932 2.034053 CACCATTTAGCACGTTGTTGGT 59.966 45.455 0.00 0.00 36.46 3.67
1680 4933 2.034053 ACACCATTTAGCACGTTGTTGG 59.966 45.455 0.00 0.00 0.00 3.77
1681 4934 3.347958 ACACCATTTAGCACGTTGTTG 57.652 42.857 0.00 0.00 0.00 3.33
1682 4935 3.129638 ACAACACCATTTAGCACGTTGTT 59.870 39.130 0.00 0.00 43.08 2.83
1683 4936 2.685897 ACAACACCATTTAGCACGTTGT 59.314 40.909 0.00 0.00 41.41 3.32
1684 4937 3.042189 CACAACACCATTTAGCACGTTG 58.958 45.455 0.00 0.00 39.61 4.10
1685 4938 2.685897 ACACAACACCATTTAGCACGTT 59.314 40.909 0.00 0.00 0.00 3.99
1686 4939 2.032799 CACACAACACCATTTAGCACGT 59.967 45.455 0.00 0.00 0.00 4.49
1687 4940 2.032799 ACACACAACACCATTTAGCACG 59.967 45.455 0.00 0.00 0.00 5.34
1688 4941 3.181491 ACACACACAACACCATTTAGCAC 60.181 43.478 0.00 0.00 0.00 4.40
1689 4942 3.020274 ACACACACAACACCATTTAGCA 58.980 40.909 0.00 0.00 0.00 3.49
1690 4943 3.708563 ACACACACAACACCATTTAGC 57.291 42.857 0.00 0.00 0.00 3.09
1691 4944 6.371809 AAGTACACACACAACACCATTTAG 57.628 37.500 0.00 0.00 0.00 1.85
1692 4945 7.012515 CCTTAAGTACACACACAACACCATTTA 59.987 37.037 0.97 0.00 0.00 1.40
1693 4946 6.183360 CCTTAAGTACACACACAACACCATTT 60.183 38.462 0.97 0.00 0.00 2.32
1694 4947 5.298276 CCTTAAGTACACACACAACACCATT 59.702 40.000 0.97 0.00 0.00 3.16
1695 4948 4.819630 CCTTAAGTACACACACAACACCAT 59.180 41.667 0.97 0.00 0.00 3.55
1696 4949 4.193090 CCTTAAGTACACACACAACACCA 58.807 43.478 0.97 0.00 0.00 4.17
1697 4950 4.034742 CACCTTAAGTACACACACAACACC 59.965 45.833 0.97 0.00 0.00 4.16
1698 4951 4.632688 ACACCTTAAGTACACACACAACAC 59.367 41.667 0.97 0.00 0.00 3.32
1699 4952 4.834534 ACACCTTAAGTACACACACAACA 58.165 39.130 0.97 0.00 0.00 3.33
1700 4953 5.806366 AACACCTTAAGTACACACACAAC 57.194 39.130 0.97 0.00 0.00 3.32
1701 4954 5.354792 GGAAACACCTTAAGTACACACACAA 59.645 40.000 0.97 0.00 35.41 3.33
1702 4955 4.877251 GGAAACACCTTAAGTACACACACA 59.123 41.667 0.97 0.00 35.41 3.72
1703 4956 4.274214 GGGAAACACCTTAAGTACACACAC 59.726 45.833 0.97 0.00 38.98 3.82
1704 4957 4.080469 TGGGAAACACCTTAAGTACACACA 60.080 41.667 0.97 0.00 38.98 3.72
1705 4958 4.453751 TGGGAAACACCTTAAGTACACAC 58.546 43.478 0.97 0.00 38.98 3.82
1706 4959 4.774660 TGGGAAACACCTTAAGTACACA 57.225 40.909 0.97 0.00 38.98 3.72
1707 4960 6.453926 TTTTGGGAAACACCTTAAGTACAC 57.546 37.500 0.97 0.00 38.98 2.90
1708 4961 7.064229 AGATTTTGGGAAACACCTTAAGTACA 58.936 34.615 0.97 0.00 38.98 2.90
1709 4962 7.520451 AGATTTTGGGAAACACCTTAAGTAC 57.480 36.000 0.97 0.00 38.98 2.73
1710 4963 8.541899 AAAGATTTTGGGAAACACCTTAAGTA 57.458 30.769 0.97 0.00 38.98 2.24
1711 4964 7.432148 AAAGATTTTGGGAAACACCTTAAGT 57.568 32.000 0.97 0.00 38.98 2.24
1712 4965 8.638873 AGTAAAGATTTTGGGAAACACCTTAAG 58.361 33.333 0.00 0.00 38.98 1.85
1713 4966 8.417884 CAGTAAAGATTTTGGGAAACACCTTAA 58.582 33.333 0.00 0.00 38.98 1.85
1714 4967 7.780745 TCAGTAAAGATTTTGGGAAACACCTTA 59.219 33.333 0.00 0.00 38.98 2.69
1715 4968 6.609616 TCAGTAAAGATTTTGGGAAACACCTT 59.390 34.615 0.00 0.00 38.98 3.50
1716 4969 6.040504 GTCAGTAAAGATTTTGGGAAACACCT 59.959 38.462 0.00 0.00 38.98 4.00
1717 4970 6.183360 TGTCAGTAAAGATTTTGGGAAACACC 60.183 38.462 0.00 0.00 38.08 4.16
1718 4971 6.695713 GTGTCAGTAAAGATTTTGGGAAACAC 59.304 38.462 0.00 0.00 0.00 3.32
1719 4972 6.605594 AGTGTCAGTAAAGATTTTGGGAAACA 59.394 34.615 0.00 0.00 0.00 2.83
1720 4973 7.039313 AGTGTCAGTAAAGATTTTGGGAAAC 57.961 36.000 0.00 0.00 0.00 2.78
1721 4974 8.934023 ATAGTGTCAGTAAAGATTTTGGGAAA 57.066 30.769 0.00 0.00 0.00 3.13
1722 4975 8.934023 AATAGTGTCAGTAAAGATTTTGGGAA 57.066 30.769 0.00 0.00 0.00 3.97
1723 4976 8.934023 AAATAGTGTCAGTAAAGATTTTGGGA 57.066 30.769 0.00 0.00 0.00 4.37
1724 4977 8.792633 TGAAATAGTGTCAGTAAAGATTTTGGG 58.207 33.333 0.00 0.00 0.00 4.12
1752 5005 9.869757 GTGGCTTAAGGTTGATTTTTATATTGT 57.130 29.630 4.29 0.00 0.00 2.71
1756 5009 9.084533 ACAAGTGGCTTAAGGTTGATTTTTATA 57.915 29.630 4.29 0.00 0.00 0.98
1757 5010 7.962441 ACAAGTGGCTTAAGGTTGATTTTTAT 58.038 30.769 4.29 0.00 0.00 1.40
1758 5011 7.354751 ACAAGTGGCTTAAGGTTGATTTTTA 57.645 32.000 4.29 0.00 0.00 1.52
1759 5012 6.233905 ACAAGTGGCTTAAGGTTGATTTTT 57.766 33.333 4.29 0.00 0.00 1.94
1760 5013 5.869649 ACAAGTGGCTTAAGGTTGATTTT 57.130 34.783 4.29 0.00 0.00 1.82
1761 5014 5.869649 AACAAGTGGCTTAAGGTTGATTT 57.130 34.783 4.29 0.00 0.00 2.17
1762 5015 5.869649 AAACAAGTGGCTTAAGGTTGATT 57.130 34.783 4.29 0.00 0.00 2.57
1763 5016 5.830991 TGTAAACAAGTGGCTTAAGGTTGAT 59.169 36.000 4.29 0.00 0.00 2.57
1764 5017 5.194432 TGTAAACAAGTGGCTTAAGGTTGA 58.806 37.500 4.29 0.00 0.00 3.18
1765 5018 5.508200 TGTAAACAAGTGGCTTAAGGTTG 57.492 39.130 4.29 0.00 0.00 3.77
1766 5019 5.830991 TCATGTAAACAAGTGGCTTAAGGTT 59.169 36.000 4.29 0.00 0.00 3.50
1767 5020 5.381757 TCATGTAAACAAGTGGCTTAAGGT 58.618 37.500 4.29 0.00 0.00 3.50
1768 5021 5.957842 TCATGTAAACAAGTGGCTTAAGG 57.042 39.130 4.29 0.00 0.00 2.69
1769 5022 5.858581 GCTTCATGTAAACAAGTGGCTTAAG 59.141 40.000 0.00 0.00 0.00 1.85
1770 5023 5.534654 AGCTTCATGTAAACAAGTGGCTTAA 59.465 36.000 0.00 0.00 0.00 1.85
1771 5024 5.070001 AGCTTCATGTAAACAAGTGGCTTA 58.930 37.500 0.00 0.00 0.00 3.09
1772 5025 3.891366 AGCTTCATGTAAACAAGTGGCTT 59.109 39.130 0.00 0.00 0.00 4.35
1773 5026 3.490348 AGCTTCATGTAAACAAGTGGCT 58.510 40.909 0.00 0.00 0.00 4.75
1774 5027 3.667960 CGAGCTTCATGTAAACAAGTGGC 60.668 47.826 0.00 0.00 0.00 5.01
1775 5028 3.667960 GCGAGCTTCATGTAAACAAGTGG 60.668 47.826 0.00 0.00 0.00 4.00
1776 5029 3.058983 TGCGAGCTTCATGTAAACAAGTG 60.059 43.478 0.00 0.00 0.00 3.16
1777 5030 3.138304 TGCGAGCTTCATGTAAACAAGT 58.862 40.909 0.00 0.00 0.00 3.16
1778 5031 3.811722 TGCGAGCTTCATGTAAACAAG 57.188 42.857 0.00 0.00 0.00 3.16
1779 5032 3.750652 TGATGCGAGCTTCATGTAAACAA 59.249 39.130 9.21 0.00 0.00 2.83
1780 5033 3.333804 TGATGCGAGCTTCATGTAAACA 58.666 40.909 9.21 0.00 0.00 2.83
1781 5034 3.786818 GCTGATGCGAGCTTCATGTAAAC 60.787 47.826 12.92 0.00 35.95 2.01
1782 5035 2.352651 GCTGATGCGAGCTTCATGTAAA 59.647 45.455 12.92 0.00 35.95 2.01
1783 5036 1.935873 GCTGATGCGAGCTTCATGTAA 59.064 47.619 12.92 0.00 35.95 2.41
1784 5037 1.134729 TGCTGATGCGAGCTTCATGTA 60.135 47.619 12.92 5.88 43.34 2.29
1785 5038 0.392060 TGCTGATGCGAGCTTCATGT 60.392 50.000 12.92 0.00 43.34 3.21
1786 5039 0.305009 CTGCTGATGCGAGCTTCATG 59.695 55.000 12.92 9.10 43.34 3.07
1787 5040 0.107800 ACTGCTGATGCGAGCTTCAT 60.108 50.000 12.92 2.52 43.34 2.57
1788 5041 0.321034 AACTGCTGATGCGAGCTTCA 60.321 50.000 12.12 12.12 43.34 3.02
1789 5042 0.801251 AAACTGCTGATGCGAGCTTC 59.199 50.000 0.00 4.29 43.34 3.86
1790 5043 1.068748 CAAAACTGCTGATGCGAGCTT 60.069 47.619 0.00 0.00 43.34 3.74
1791 5044 0.520404 CAAAACTGCTGATGCGAGCT 59.480 50.000 0.00 0.00 43.34 4.09
1792 5045 0.239347 ACAAAACTGCTGATGCGAGC 59.761 50.000 0.00 0.00 43.34 5.03
1793 5046 1.265095 ACACAAAACTGCTGATGCGAG 59.735 47.619 0.00 0.00 43.34 5.03
1794 5047 1.308047 ACACAAAACTGCTGATGCGA 58.692 45.000 0.00 0.00 43.34 5.10
1795 5048 2.032117 TGTACACAAAACTGCTGATGCG 60.032 45.455 0.00 0.00 43.34 4.73
1796 5049 3.624326 TGTACACAAAACTGCTGATGC 57.376 42.857 0.00 0.00 40.20 3.91
1797 5050 5.361135 TGATGTACACAAAACTGCTGATG 57.639 39.130 0.00 0.00 0.00 3.07
1813 5066 4.025360 ACCAACCCGTATACAGTGATGTA 58.975 43.478 3.32 0.00 0.00 2.29
1820 5073 4.628074 CAGGATAACCAACCCGTATACAG 58.372 47.826 3.32 0.00 38.94 2.74
1840 5093 3.931468 CCTCTCTATTTCACACAGTGCAG 59.069 47.826 0.00 0.00 32.98 4.41
1841 5094 3.578282 TCCTCTCTATTTCACACAGTGCA 59.422 43.478 0.00 0.00 32.98 4.57
1897 5156 9.116067 GATACCATGTGCTAAAGGTTACAATAA 57.884 33.333 0.00 0.00 35.62 1.40
1898 5157 7.439955 CGATACCATGTGCTAAAGGTTACAATA 59.560 37.037 0.00 0.00 35.62 1.90
1899 5158 6.260050 CGATACCATGTGCTAAAGGTTACAAT 59.740 38.462 0.00 0.00 35.62 2.71
1900 5159 5.583061 CGATACCATGTGCTAAAGGTTACAA 59.417 40.000 0.00 0.00 35.62 2.41
1901 5160 5.113383 CGATACCATGTGCTAAAGGTTACA 58.887 41.667 0.00 0.00 35.62 2.41
1902 5161 4.510340 CCGATACCATGTGCTAAAGGTTAC 59.490 45.833 0.00 0.00 35.62 2.50
1903 5162 4.443739 CCCGATACCATGTGCTAAAGGTTA 60.444 45.833 0.00 0.00 35.62 2.85
1904 5163 3.541632 CCGATACCATGTGCTAAAGGTT 58.458 45.455 0.00 0.00 35.62 3.50
1905 5164 2.158813 CCCGATACCATGTGCTAAAGGT 60.159 50.000 0.00 0.00 38.14 3.50
1906 5165 2.158813 ACCCGATACCATGTGCTAAAGG 60.159 50.000 0.00 0.00 0.00 3.11
1907 5166 3.194005 ACCCGATACCATGTGCTAAAG 57.806 47.619 0.00 0.00 0.00 1.85
1908 5167 3.275143 CAACCCGATACCATGTGCTAAA 58.725 45.455 0.00 0.00 0.00 1.85
1909 5168 2.420827 CCAACCCGATACCATGTGCTAA 60.421 50.000 0.00 0.00 0.00 3.09
1910 5169 1.140052 CCAACCCGATACCATGTGCTA 59.860 52.381 0.00 0.00 0.00 3.49
1911 5170 0.107214 CCAACCCGATACCATGTGCT 60.107 55.000 0.00 0.00 0.00 4.40
1912 5171 0.107410 TCCAACCCGATACCATGTGC 60.107 55.000 0.00 0.00 0.00 4.57
1913 5172 2.411628 TTCCAACCCGATACCATGTG 57.588 50.000 0.00 0.00 0.00 3.21
1914 5173 2.507886 TGATTCCAACCCGATACCATGT 59.492 45.455 0.00 0.00 0.00 3.21
1915 5174 3.207265 TGATTCCAACCCGATACCATG 57.793 47.619 0.00 0.00 0.00 3.66
1916 5175 3.551846 GTTGATTCCAACCCGATACCAT 58.448 45.455 0.00 0.00 45.19 3.55
1917 5176 2.993937 GTTGATTCCAACCCGATACCA 58.006 47.619 0.00 0.00 45.19 3.25
1928 5187 3.181434 GGCCATAGGGTATGTTGATTCCA 60.181 47.826 0.00 0.00 36.17 3.53
1930 5189 4.098914 TGGCCATAGGGTATGTTGATTC 57.901 45.455 0.00 0.00 36.17 2.52
1954 5213 3.308401 GCCACCATAGGGGATGATTTTT 58.692 45.455 0.00 0.00 41.15 1.94
1959 5218 1.533187 ATTGCCACCATAGGGGATGA 58.467 50.000 0.00 0.00 41.15 2.92
1960 5219 3.524095 TTATTGCCACCATAGGGGATG 57.476 47.619 0.00 0.00 41.15 3.51
2027 5290 5.491439 AGGCCTATTTATATGTTCCCTACCC 59.509 44.000 1.29 0.00 0.00 3.69
2033 5296 7.833285 TTGGAAAGGCCTATTTATATGTTCC 57.167 36.000 16.84 16.84 37.63 3.62
2050 5314 7.475137 TCTTTATATGGGGTGTTTTGGAAAG 57.525 36.000 0.00 0.00 0.00 2.62
2163 5427 8.747471 TGGCATGTTTTATATGAAAATCACTCA 58.253 29.630 0.00 0.00 0.00 3.41
2180 5444 3.007182 CCAACTCCAAATCTGGCATGTTT 59.993 43.478 0.00 0.00 43.17 2.83
2183 5447 1.479323 CCCAACTCCAAATCTGGCATG 59.521 52.381 0.00 0.00 43.17 4.06
2187 5451 2.299867 CAAACCCCAACTCCAAATCTGG 59.700 50.000 0.00 0.00 45.08 3.86
2188 5452 3.230134 TCAAACCCCAACTCCAAATCTG 58.770 45.455 0.00 0.00 0.00 2.90
2195 5459 5.261216 TCATATCTTTCAAACCCCAACTCC 58.739 41.667 0.00 0.00 0.00 3.85
2225 5489 5.595885 TCGGACAAATTCAAATGCTTTTCA 58.404 33.333 0.00 0.00 0.00 2.69
2226 5490 6.523676 TTCGGACAAATTCAAATGCTTTTC 57.476 33.333 0.00 0.00 0.00 2.29
2254 5518 8.764287 CCCAACAACTCTAACATTTTTCATTTC 58.236 33.333 0.00 0.00 0.00 2.17
2255 5519 7.226523 GCCCAACAACTCTAACATTTTTCATTT 59.773 33.333 0.00 0.00 0.00 2.32
2258 5522 5.452636 GGCCCAACAACTCTAACATTTTTCA 60.453 40.000 0.00 0.00 0.00 2.69
2259 5523 4.988540 GGCCCAACAACTCTAACATTTTTC 59.011 41.667 0.00 0.00 0.00 2.29
2260 5524 4.202315 GGGCCCAACAACTCTAACATTTTT 60.202 41.667 19.95 0.00 0.00 1.94
2265 5530 0.847373 TGGGCCCAACAACTCTAACA 59.153 50.000 26.33 0.00 0.00 2.41
2276 5541 0.769873 ATGTTGCAATTTGGGCCCAA 59.230 45.000 34.07 34.07 0.00 4.12
2278 5543 2.777832 TAATGTTGCAATTTGGGCCC 57.222 45.000 17.59 17.59 0.00 5.80
2289 5554 9.390795 CTTAGCAAATGAGATGTATAATGTTGC 57.609 33.333 0.00 0.00 39.22 4.17
2302 5567 5.977635 TCTCCGAATTCTTAGCAAATGAGA 58.022 37.500 3.52 0.00 0.00 3.27
2303 5568 6.045318 TCTCTCCGAATTCTTAGCAAATGAG 58.955 40.000 3.52 0.00 0.00 2.90
2308 5573 4.950475 TCTCTCTCTCCGAATTCTTAGCAA 59.050 41.667 3.52 0.00 0.00 3.91
2313 5578 6.015010 TGTTTTCTCTCTCTCTCCGAATTCTT 60.015 38.462 3.52 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.